TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(229 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,171,752 sequences; 566,364,212 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
emb|X95074.1|GGTRANSLN G.gallus mRNA for translin 448 e-124
emb|X98066.1|CATRANS C.aureus mRNA for translin 388 e-106
ref|NM_021762.1| Rattus norvegicus translin (Tsn), mRNA 388 e-106
gb|AF262356.1|AF262356 Rattus norvegicus translin mRNA, com... 388 e-106
gb|BC002359.1|BC002359 Homo sapiens, translin, clone MGC:85... 386 e-106
ref|NM_004622.1| Homo sapiens translin (TSN), mRNA 386 e-106
emb|X78627.1|HSTRANSLI H.sapiens mRNA for translin 386 e-106
dbj|AK010737.1|AK010737 Mus musculus ES cells cDNA, RIKEN f... 386 e-106
gb|BC004615.1|BC004615 Mus musculus, translin, clone MGC:60... 386 e-106
ref|NM_011650.1| Mus musculus translin (Tsn), mRNA 386 e-106
emb|X81464.1|MMTRANSL M.musculus mRNA for translin 386 e-106
gb|AF234179.1|AF234179 Mus musculus RNA-binding protein (Tb... 386 e-106
gb|AF169343.1|AF169343 Xenopus laevis translin mRNA, comple... 359 1e-97
ref|XM_081102.1| similar to CG11761 gene product (D. melano... 220 8e-56
ref|NM_129258.1| translin-like protein 142 2e-32
gb|AY042792.1| Arabidopsis thaliana translin-like protein (... 142 2e-32
gb|AY064692.1| Arabidopsis thaliana translin-like protein (... 142 2e-32
gb|AC007398.6|AC007398 Drosophila melanogaster, chromosome ... 141 3e-32
gb|AC007418.8|AC007418 Drosophila melanogaster, chromosome ... 141 3e-32
gb|AE003829.2|AE003829 Drosophila melanogaster genomic scaf... 141 3e-32
emb|Y12572.1|MMTRANEX6 M.musculus gene encoding translin, e... 136 1e-30
gb|AC018737.9| Homo sapiens BAC clone RP11-416H1 from 2, co... 131 5e-29
gb|AC002075.1|AC002075 Human BAC clone GS1-274A7 from 7q31,... 81 2e-27
gb|AF197019.1|AF197019 Pan troglodytes translin pseudogene,... 78 4e-27
gb|AF196998.1|AF196998 Homo sapiens translin pseudogene, pa... 78 2e-26
emb|Y12567.1|HSTRANEX6 H.sapiens gene encoding translin, ex... 120 8e-26
emb|Y12570.1|MMTRANEX4 M.musculus gene encoding translin, e... 78 5e-13
emb|Y12565.1|HSTRANEX4 H.sapiens gene encoding translin, ex... 78 6e-13
emb|AL136538.1|SPAC30 S.pombe chromosome I cosmid c30 76 2e-12
gb|AC006922.6|AC006922 Arabidopsis thaliana chromosome II s... 71 8e-11
ref|NM_016909.1| Mus musculus translin-associated factor X ... 67 1e-09
gb|AF187040.1|AF187040 Mus musculus translin associated pro... 67 1e-09
gb|BC004611.1|BC004611 Mus musculus, translin-associated fa... 67 1e-09
gb|AF262357.1|AF262357 Rattus norvegicus trax mRNA, complet... 65 3e-09
ref|NM_022262.1| Rattus norvegicus translin-associated fact... 65 3e-09
emb|Y12564.1|HSTRANEX3 H.sapiens gene encoding translin, ex... 63 2e-08
ref|XM_094947.1| Homo sapiens similar to translin (LOC16824... 63 2e-08
gb|BC011797.1|BC011797 Homo sapiens, Similar to translin-as... 63 2e-08
ref|NM_005999.1| Homo sapiens translin-associated factor X ... 63 2e-08
emb|X95073.1|HSTRAXGEN H.sapiens mRNA for translin associat... 63 2e-08
gb|BC010376.1|BC010376 Homo sapiens, translin-associated fa... 63 2e-08
emb|Y12569.1|MMTRANEX3 M.musculus gene encoding translin, e... 61 8e-08
emb|Y12563.1|HSTRANEX2 H.sapiens gene encoding translin, ex... 58 7e-07
emb|Y12568.1|MMTRANEX2 M.musculus gene encoding translin, e... 56 2e-06
gb|AF271269.1|AF271267S3 Homo sapiens translin-like protein... 54 7e-06
emb|Y12571.1|MMTRANEX5 M.musculus gene encoding translin, e... 52 4e-05
emb|Y12566.1|HSTRANEX5 H.sapiens gene encoding translin, ex... 52 5e-05
emb|AL023705.1|SPCC736 S.pombe chromosome III cosmid c736 45 0.003
emb|AL627362.1|CNS07TIX DNA centromeric region sequence fro... 45 0.006
emb|Z81536.1|CEF40D4 Caenorhabditis elegans cosmid F40D4, c... 35 6.0
>emb|X95074.1|GGTRANSLN G.gallus mRNA for translin
Length = 984
Score = 448 bits (1153), Expect = e-124
Identities = 229/229 (100%), Positives = 229/229 (100%)
Frame = +2
Query: 1 MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK 60
MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK
Sbjct: 5 MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK 184
Query: 61 AREHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVA 120
AREHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVA
Sbjct: 185 AREHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVA 364
Query: 121 EILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSG 180
EILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSG
Sbjct: 365 EILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSG 544
Query: 181 FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKEATGGAGGEK 229
FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKEATGGAGGEK
Sbjct: 545 FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKEATGGAGGEK 691
>emb|X98066.1|CATRANS C.aureus mRNA for translin
Length = 1095
Score = 388 bits (997), Expect = e-106
Identities = 197/229 (86%), Positives = 211/229 (92%)
Frame = +1
Query: 1 MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK 60
MSVS +FV LQG L A+QDIREEIRKVVQ+LEQTARE+LTL QGVHQG GFQDIPK+C K
Sbjct: 58 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLK 237
Query: 61 AREHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVA 120
AREHFGTV+T + SLKTKFPA+QYYRFHEHWRFVLQRLVFLA+FVVYLETETLVTREAV
Sbjct: 238 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 417
Query: 121 EILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSG 180
EILGIE DRE+GFHLD+EDYLSGVL LASEL+RL+VNSVTAGDYSRPL ISTFINELDSG
Sbjct: 418 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 597
Query: 181 FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKEATGGAGGEK 229
FRLLNLKNDSLRKRYDGLKYDVKK+EEVVYDLSIRG NKE T A GEK
Sbjct: 598 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKE-TAAACGEK 741
>ref|NM_021762.1| Rattus norvegicus translin (Tsn), mRNA
Length = 988
Score = 388 bits (997), Expect = e-106
Identities = 197/229 (86%), Positives = 211/229 (92%)
Frame = +2
Query: 1 MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK 60
MSVS +FV LQG L A+QDIREEIRKVVQ+LEQTARE+LTL QGVHQG GFQDIPK+C K
Sbjct: 107 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLK 286
Query: 61 AREHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVA 120
AREHFGTV+T + SLKTKFPA+QYYRFHEHWRFVLQRLVFLA+FVVYLETETLVTREAV
Sbjct: 287 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 466
Query: 121 EILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSG 180
EILGIE DRE+GFHLD+EDYLSGVL LASEL+RL+VNSVTAGDYSRPL ISTFINELDSG
Sbjct: 467 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 646
Query: 181 FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKEATGGAGGEK 229
FRLLNLKNDSLRKRYDGLKYDVKK+EEVVYDLSIRG NKE T A GEK
Sbjct: 647 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKE-TAAACGEK 790
>gb|AF262356.1|AF262356 Rattus norvegicus translin mRNA, complete cds
Length = 988
Score = 388 bits (997), Expect = e-106
Identities = 197/229 (86%), Positives = 211/229 (92%)
Frame = +2
Query: 1 MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK 60
MSVS +FV LQG L A+QDIREEIRKVVQ+LEQTARE+LTL QGVHQG GFQDIPK+C K
Sbjct: 107 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLK 286
Query: 61 AREHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVA 120
AREHFGTV+T + SLKTKFPA+QYYRFHEHWRFVLQRLVFLA+FVVYLETETLVTREAV
Sbjct: 287 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 466
Query: 121 EILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSG 180
EILGIE DRE+GFHLD+EDYLSGVL LASEL+RL+VNSVTAGDYSRPL ISTFINELDSG
Sbjct: 467 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 646
Query: 181 FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKEATGGAGGEK 229
FRLLNLKNDSLRKRYDGLKYDVKK+EEVVYDLSIRG NKE T A GEK
Sbjct: 647 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKE-TAAACGEK 790
>gb|BC002359.1|BC002359 Homo sapiens, translin, clone MGC:8527 IMAGE:2822564, mRNA,
complete cds
Length = 1318
Score = 386 bits (992), Expect = e-106
Identities = 197/229 (86%), Positives = 211/229 (92%)
Frame = +1
Query: 1 MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK 60
MSVS +FV LQG L A+QDIREEIRKVVQ+LEQTARE+LTL QGVHQGAGFQDIPK+C K
Sbjct: 115 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 294
Query: 61 AREHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVA 120
AREHFGTV+T + SLKTKFPA+QYYRFHEHWRFVLQRLVFLA+FVVYLETETLVTREAV
Sbjct: 295 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 474
Query: 121 EILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSG 180
EILGIE DRE+GFHLD+EDYLSGVL LASEL+RL+VNSVTAGDYSRPL ISTFINELDSG
Sbjct: 475 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 654
Query: 181 FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKEATGGAGGEK 229
FRLLNLKNDSLRKRYDGLKYDVKK+EEVVYDLSIRG NKE T A EK
Sbjct: 655 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKE-TAAACVEK 798
>ref|NM_004622.1| Homo sapiens translin (TSN), mRNA
Length = 2739
Score = 386 bits (992), Expect = e-106
Identities = 197/229 (86%), Positives = 211/229 (92%)
Frame = +1
Query: 1 MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK 60
MSVS +FV LQG L A+QDIREEIRKVVQ+LEQTARE+LTL QGVHQGAGFQDIPK+C K
Sbjct: 82 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 261
Query: 61 AREHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVA 120
AREHFGTV+T + SLKTKFPA+QYYRFHEHWRFVLQRLVFLA+FVVYLETETLVTREAV
Sbjct: 262 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 441
Query: 121 EILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSG 180
EILGIE DRE+GFHLD+EDYLSGVL LASEL+RL+VNSVTAGDYSRPL ISTFINELDSG
Sbjct: 442 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 621
Query: 181 FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKEATGGAGGEK 229
FRLLNLKNDSLRKRYDGLKYDVKK+EEVVYDLSIRG NKE T A EK
Sbjct: 622 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKE-TAAACVEK 765
>emb|X78627.1|HSTRANSLI H.sapiens mRNA for translin
Length = 2739
Score = 386 bits (992), Expect = e-106
Identities = 197/229 (86%), Positives = 211/229 (92%)
Frame = +1
Query: 1 MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK 60
MSVS +FV LQG L A+QDIREEIRKVVQ+LEQTARE+LTL QGVHQGAGFQDIPK+C K
Sbjct: 82 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 261
Query: 61 AREHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVA 120
AREHFGTV+T + SLKTKFPA+QYYRFHEHWRFVLQRLVFLA+FVVYLETETLVTREAV
Sbjct: 262 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 441
Query: 121 EILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSG 180
EILGIE DRE+GFHLD+EDYLSGVL LASEL+RL+VNSVTAGDYSRPL ISTFINELDSG
Sbjct: 442 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 621
Query: 181 FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKEATGGAGGEK 229
FRLLNLKNDSLRKRYDGLKYDVKK+EEVVYDLSIRG NKE T A EK
Sbjct: 622 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKE-TAAACVEK 765
>dbj|AK010737.1|AK010737 Mus musculus ES cells cDNA, RIKEN full-length enriched library,
clone:2410083E08:translin, full insert sequence
Length = 1235
Score = 386 bits (991), Expect = e-106
Identities = 196/229 (85%), Positives = 210/229 (91%)
Frame = +2
Query: 1 MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK 60
MSVS +FV LQG L A+QDIREEIRKVVQ+LEQTARE+LTL QGVHQG GFQDIPK+C K
Sbjct: 65 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLK 244
Query: 61 AREHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVA 120
AREHF TV+T + SLKTKFPA+QYYRFHEHWRFVLQRLVFLA+FVVYLETETLVTREAV
Sbjct: 245 AREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 424
Query: 121 EILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSG 180
EILGIE DRE+GFHLD+EDYLSGVL LASEL+RL+VNSVTAGDYSRPL ISTFINELDSG
Sbjct: 425 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 604
Query: 181 FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKEATGGAGGEK 229
FRLLNLKNDSLRKRYDGLKYDVKK+EEVVYDLSIRG NKE T A GEK
Sbjct: 605 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKE-TAAACGEK 748
>gb|BC004615.1|BC004615 Mus musculus, translin, clone MGC:6020 IMAGE:3585366, mRNA,
complete cds
Length = 979
Score = 386 bits (991), Expect = e-106
Identities = 196/229 (85%), Positives = 210/229 (91%)
Frame = +2
Query: 1 MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK 60
MSVS +FV LQG L A+QDIREEIRKVVQ+LEQTARE+LTL QGVHQG GFQDIPK+C K
Sbjct: 113 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLK 292
Query: 61 AREHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVA 120
AREHF TV+T + SLKTKFPA+QYYRFHEHWRFVLQRLVFLA+FVVYLETETLVTREAV
Sbjct: 293 AREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 472
Query: 121 EILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSG 180
EILGIE DRE+GFHLD+EDYLSGVL LASEL+RL+VNSVTAGDYSRPL ISTFINELDSG
Sbjct: 473 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 652
Query: 181 FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKEATGGAGGEK 229
FRLLNLKNDSLRKRYDGLKYDVKK+EEVVYDLSIRG NKE T A GEK
Sbjct: 653 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKE-TAAACGEK 796
>ref|NM_011650.1| Mus musculus translin (Tsn), mRNA
Length = 991
Score = 386 bits (991), Expect = e-106
Identities = 196/229 (85%), Positives = 210/229 (91%)
Frame = +1
Query: 1 MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK 60
MSVS +FV LQG L A+QDIREEIRKVVQ+LEQTARE+LTL QGVHQG GFQDIPK+C K
Sbjct: 67 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLK 246
Query: 61 AREHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVA 120
AREHF TV+T + SLKTKFPA+QYYRFHEHWRFVLQRLVFLA+FVVYLETETLVTREAV
Sbjct: 247 AREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 426
Query: 121 EILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSG 180
EILGIE DRE+GFHLD+EDYLSGVL LASEL+RL+VNSVTAGDYSRPL ISTFINELDSG
Sbjct: 427 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 606
Query: 181 FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKEATGGAGGEK 229
FRLLNLKNDSLRKRYDGLKYDVKK+EEVVYDLSIRG NKE T A GEK
Sbjct: 607 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKE-TAAACGEK 750
>emb|X81464.1|MMTRANSL M.musculus mRNA for translin
Length = 991
Score = 386 bits (991), Expect = e-106
Identities = 196/229 (85%), Positives = 210/229 (91%)
Frame = +1
Query: 1 MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK 60
MSVS +FV LQG L A+QDIREEIRKVVQ+LEQTARE+LTL QGVHQG GFQDIPK+C K
Sbjct: 67 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLK 246
Query: 61 AREHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVA 120
AREHF TV+T + SLKTKFPA+QYYRFHEHWRFVLQRLVFLA+FVVYLETETLVTREAV
Sbjct: 247 AREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 426
Query: 121 EILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSG 180
EILGIE DRE+GFHLD+EDYLSGVL LASEL+RL+VNSVTAGDYSRPL ISTFINELDSG
Sbjct: 427 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 606
Query: 181 FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKEATGGAGGEK 229
FRLLNLKNDSLRKRYDGLKYDVKK+EEVVYDLSIRG NKE T A GEK
Sbjct: 607 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKE-TAAACGEK 750
>gb|AF234179.1|AF234179 Mus musculus RNA-binding protein (Tbrbp) mRNA, complete cds
Length = 3065
Score = 386 bits (991), Expect = e-106
Identities = 196/229 (85%), Positives = 210/229 (91%)
Frame = +1
Query: 1 MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK 60
MSVS +FV LQG L A+QDIREEIRKVVQ+LEQTARE+LTL QGVHQG GFQDIPK+C K
Sbjct: 67 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLK 246
Query: 61 AREHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVA 120
AREHF TV+T + SLKTKFPA+QYYRFHEHWRFVLQRLVFLA+FVVYLETETLVTREAV
Sbjct: 247 AREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 426
Query: 121 EILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSG 180
EILGIE DRE+GFHLD+EDYLSGVL LASEL+RL+VNSVTAGDYSRPL ISTFINELDSG
Sbjct: 427 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 606
Query: 181 FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKEATGGAGGEK 229
FRLLNLKNDSLRKRYDGLKYDVKK+EEVVYDLSIRG NKE T A GEK
Sbjct: 607 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKE-TAAACGEK 750
>gb|AF169343.1|AF169343 Xenopus laevis translin mRNA, complete cds
Length = 874
Score = 359 bits (921), Expect = 1e-97
Identities = 184/228 (80%), Positives = 204/228 (88%)
Frame = +1
Query: 1 MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK 60
MSV MFV LQ L+ADQD+REEIRKVVQ+LEQTARE+L L QGVHQ AGF+DIP KC K
Sbjct: 136 MSVIDMFVELQCGLSADQDVREEIRKVVQSLEQTAREILILLQGVHQEAGFKDIPAKCLK 315
Query: 61 AREHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVA 120
AREH+ TVR Q+ +L+TKFPA+QYY+FH+ WRFVLQRLVFLASF+VYLETETLVTREAVA
Sbjct: 316 AREHYSTVRDQLATLQTKFPAEQYYKFHDQWRFVLQRLVFLASFLVYLETETLVTREAVA 495
Query: 121 EILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSG 180
EILGIE RE+GFHLDIEDYLSGVL LA+EL+RLAVNSV AGDYSRPLRI++FINELD G
Sbjct: 496 EILGIEYVREKGFHLDIEDYLSGVLNLANELSRLAVNSVIAGDYSRPLRIASFINELDFG 675
Query: 181 FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKEATGGAGGE 228
FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGL+KE A G+
Sbjct: 676 FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLSKEEPTPAEGK 819
>ref|XM_081102.1| similar to CG11761 gene product (D. melanogaster), mRNA
Length = 862
Score = 220 bits (560), Expect = 8e-56
Identities = 112/215 (52%), Positives = 147/215 (68%)
Frame = +1
Query: 6 MFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQKAREHF 65
+F Q + +Q++RE IR VV+ +E ++E Q +H + I C AR+
Sbjct: 94 IFSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIH--SDLSQISAACGLARKQV 267
Query: 66 GTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAEILGI 125
+ + L PA QYYR+ +HW F+ QRL+F+ + V+YLE LVTRE VAE+LG+
Sbjct: 268 ELCAQKYQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLGL 447
Query: 126 EADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSGFRLLN 185
+ + GFHLD+EDYL G+L LASEL+R A NSVT GDY RPL IS FI +L++GFRLLN
Sbjct: 448 KISQSEGFHLDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGDLNTGFRLLN 627
Query: 186 LKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKE 220
LKND LRKR+D LKYDVKKIEEVVYD+SIRGL+ +
Sbjct: 628 LKNDGLRKRFDALKYDVKKIEEVVYDVSIRGLSSK 732
>ref|NM_129258.1| translin-like protein
Length = 1155
Score = 142 bits (358), Expect = 2e-32
Identities = 81/219 (36%), Positives = 128/219 (57%), Gaps = 3/219 (1%)
Frame = +3
Query: 2 SVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQKA 61
S+ F + + L +RE+IR VV +E R + VHQ + IP+ +KA
Sbjct: 225 SLEKQFESFRVQLEESAALREQIRAVVMEIESATRLIQANLLLVHQS---RPIPEVIEKA 395
Query: 62 REHFGTVRT---QMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREA 118
+E ++ ++ + + P QYYR+H WR Q +V +F+ +LET TL+
Sbjct: 396 KEKIVDLKQYYGRLAEILEECPG-QYYRYHGDWRSETQAVVSQLAFMHWLETGTLLVHTE 572
Query: 119 VAEILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELD 178
E LG+ + F L+ EDYL+G+ ++++L R VN VTAGDY P ++ F+ +L
Sbjct: 573 AEEKLGLNSLE---FGLETEDYLTGICFMSNDLPRYVVNRVTAGDYDCPRKVMNFLTDLH 743
Query: 179 SGFRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGL 217
+ FR+LNL+ND LRK++D +KYD++++EEV YD+ IRGL
Sbjct: 744 AAFRMLNLRNDFLRKKFDSMKYDLRRVEEVYYDVKIRGL 860
>gb|AY042792.1| Arabidopsis thaliana translin-like protein (At2g37020; T1J8.20)
mRNA, complete cds
Length = 1155
Score = 142 bits (358), Expect = 2e-32
Identities = 81/219 (36%), Positives = 128/219 (57%), Gaps = 3/219 (1%)
Frame = +3
Query: 2 SVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQKA 61
S+ F + + L +RE+IR VV +E R + VHQ + IP+ +KA
Sbjct: 225 SLEKQFESFRVQLEESAALREQIRAVVMEIESATRLIQANLLLVHQS---RPIPEVIEKA 395
Query: 62 REHFGTVRT---QMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREA 118
+E ++ ++ + + P QYYR+H WR Q +V +F+ +LET TL+
Sbjct: 396 KEKIVDLKQYYGRLAEILEECPG-QYYRYHGDWRSETQAVVSQLAFMHWLETGTLLVHTE 572
Query: 119 VAEILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELD 178
E LG+ + F L+ EDYL+G+ ++++L R VN VTAGDY P ++ F+ +L
Sbjct: 573 AEEKLGLNSLE---FGLETEDYLTGICFMSNDLPRYVVNRVTAGDYDCPRKVMNFLTDLH 743
Query: 179 SGFRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGL 217
+ FR+LNL+ND LRK++D +KYD++++EEV YD+ IRGL
Sbjct: 744 AAFRMLNLRNDFLRKKFDSMKYDLRRVEEVYYDVKIRGL 860
>gb|AY064692.1| Arabidopsis thaliana translin-like protein (At2g37020; T1J8.20)
mRNA, complete cds
Length = 769
Score = 142 bits (358), Expect = 2e-32
Identities = 81/219 (36%), Positives = 128/219 (57%), Gaps = 3/219 (1%)
Frame = +1
Query: 2 SVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQKA 61
S+ F + + L +RE+IR VV +E R + VHQ + IP+ +KA
Sbjct: 31 SLEKQFESFRVQLEESAALREQIRAVVMEIESATRLIQANLLLVHQS---RPIPEVIEKA 201
Query: 62 REHFGTVRT---QMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREA 118
+E ++ ++ + + P QYYR+H WR Q +V +F+ +LET TL+
Sbjct: 202 KEKIVDLKQYYGRLAEILEECPG-QYYRYHGDWRSETQAVVSQLAFMHWLETGTLLVHTE 378
Query: 119 VAEILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELD 178
E LG+ + F L+ EDYL+G+ ++++L R VN VTAGDY P ++ F+ +L
Sbjct: 379 AEEKLGLNSLE---FGLETEDYLTGICFMSNDLPRYVVNRVTAGDYDCPRKVMNFLTDLH 549
Query: 179 SGFRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGL 217
+ FR+LNL+ND LRK++D +KYD++++EEV YD+ IRGL
Sbjct: 550 AAFRMLNLRNDFLRKKFDSMKYDLRRVEEVYYDVKIRGL 666
>gb|AC007398.6|AC007398 Drosophila melanogaster, chromosome 2R, region 47A-47B, BAC clone
BACR20O22, complete sequence
Length = 168567
Score = 141 bits (356), Expect = 3e-32
Identities = 68/104 (65%), Positives = 82/104 (78%)
Frame = -2
Query: 117 EAVAEILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINE 176
E + ++ + GFHLD+EDYL G+L LASEL+R A NSVT GDY RPL IS FI +
Sbjct: 136931 EIIVNYSTVKISQSEGFHLDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGD 136752
Query: 177 LDSGFRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKE 220
L++GFRLLNLKND LRKR+D LKYDVKKIEEVVYD+SIRGL+ +
Sbjct: 136751 LNTGFRLLNLKNDGLRKRFDALKYDVKKIEEVVYDVSIRGLSSK 136620
Score = 56.6 bits (135), Expect = 1e-06
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = -3
Query: 84 YYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAEILGIEADRE 130
+ R+ +HW F+ QRL+F+ + V+YLE LVTRE VAE+LG + D E
Sbjct: 137086 FSRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLGCKLDLE 136946
>gb|AC007418.8|AC007418 Drosophila melanogaster, chromosome 2R, region 47A-47B, BAC clone
BACR16P22, complete sequence
Length = 186690
Score = 141 bits (356), Expect = 3e-32
Identities = 68/104 (65%), Positives = 82/104 (78%)
Frame = -2
Query: 117 EAVAEILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINE 176
E + ++ + GFHLD+EDYL G+L LASEL+R A NSVT GDY RPL IS FI +
Sbjct: 36191 EIIVNYSTVKISQSEGFHLDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGD 36012
Query: 177 LDSGFRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKE 220
L++GFRLLNLKND LRKR+D LKYDVKKIEEVVYD+SIRGL+ +
Sbjct: 36011 LNTGFRLLNLKNDGLRKRFDALKYDVKKIEEVVYDVSIRGLSSK 35880
Score = 56.6 bits (135), Expect = 1e-06
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = -3
Query: 84 YYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAEILGIEADRE 130
+ R+ +HW F+ QRL+F+ + V+YLE LVTRE VAE+LG + D E
Sbjct: 36346 FSRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLGCKLDLE 36206
>gb|AE003829.2|AE003829 Drosophila melanogaster genomic scaffold 142000013386047 section 14 of
52, complete sequence
Length = 258463
Score = 141 bits (356), Expect = 3e-32
Identities = 68/104 (65%), Positives = 82/104 (78%)
Frame = -2
Query: 117 EAVAEILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINE 176
E + ++ + GFHLD+EDYL G+L LASEL+R A NSVT GDY RPL IS FI +
Sbjct: 108711 EIIVNYSTVKISQSEGFHLDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGD 108532
Query: 177 LDSGFRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKE 220
L++GFRLLNLKND LRKR+D LKYDVKKIEEVVYD+SIRGL+ +
Sbjct: 108531 LNTGFRLLNLKNDGLRKRFDALKYDVKKIEEVVYDVSIRGLSSK 108400
Score = 56.6 bits (135), Expect = 1e-06
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = -3
Query: 84 YYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAEILGIEADRE 130
+ R+ +HW F+ QRL+F+ + V+YLE LVTRE VAE+LG + D E
Sbjct: 108866 FSRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLGCKLDLE 108726
>emb|Y12572.1|MMTRANEX6 M.musculus gene encoding translin, exon 6
Length = 451
Score = 136 bits (343), Expect = 1e-30
Identities = 73/96 (76%), Positives = 78/96 (81%)
Frame = +3
Query: 134 HLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSGFRLLNLKNDSLRK 193
H D+ D+ V + RL+VNSVTAGDYSRPL ISTFINELDSGFRLLNLKNDSLRK
Sbjct: 15 HSDVSDFFLPVQS------RLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRK 176
Query: 194 RYDGLKYDVKKIEEVVYDLSIRGLNKEATGGAGGEK 229
RYDGLKYDVKK+EEVVYDLSIRG NKE T A GEK
Sbjct: 177 RYDGLKYDVKKVEEVVYDLSIRGFNKE-TAAACGEK 281
>gb|AC018737.9| Homo sapiens BAC clone RP11-416H1 from 2, complete sequence
Length = 206454
Score = 131 bits (329), Expect = 5e-29
Identities = 68/78 (87%), Positives = 71/78 (90%)
Frame = +1
Query: 152 ARLAVNSVTAGDYSRPLRISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKIEEVVYD 211
+RL+VNSVTAGDYSRPL ISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKK+EEVVYD
Sbjct: 159235 SRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYD 159414
Query: 212 LSIRGLNKEATGGAGGEK 229
LSIRG NKE T A EK
Sbjct: 159415 LSIRGFNKE-TAAACVEK 159465
Score = 77.8 bits (190), Expect = 6e-13
Identities = 37/39 (94%), Positives = 38/39 (96%)
Frame = +3
Query: 86 RFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAEILG 124
RFHEHWRFVLQRLVFLA+FVVYLETETLVTREAV EILG
Sbjct: 155508 RFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILG 155624
Score = 63.2 bits (152), Expect = 2e-08
Identities = 26/34 (76%), Positives = 31/34 (90%)
Frame = +2
Query: 54 IPKKCQKAREHFGTVRTQMESLKTKFPADQYYRF 87
+PK+C KAREHFGTV+T + SLKTKFPA+QYYRF
Sbjct: 152810 VPKRCLKAREHFGTVKTHLTSLKTKFPAEQYYRF 152911
Score = 57.8 bits (138), Expect = 7e-07
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +3
Query: 23 EIRKVVQALEQTAREMLTLPQGVHQGAGFQD 53
EIRKVVQ+LEQTARE+LTL QGVHQGAGFQD
Sbjct: 151341 EIRKVVQSLEQTAREILTLLQGVHQGAGFQD 151433
Score = 51.2 bits (121), Expect = 6e-05
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1
Query: 125 IEADRERGFHLDIEDYLSGVLTLASELARLAVNSVT 160
+E DRE+GFHLD+EDYLSGVL LASEL V+SVT
Sbjct: 157105 VEPDREKGFHLDVEDYLSGVLILASEL----VSSVT 157200
>gb|AC002075.1|AC002075 Human BAC clone GS1-274A7 from 7q31, complete sequence [Homo sapiens]
Length = 120030
Score = 81.3 bits (199), Expect(2) = 2e-27
Identities = 45/75 (60%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Frame = -3
Query: 147 LASELARLAVNSVTAGDYSRPLRISTFINELDSGFRLLNLKN-DSLRKRYDGLKYDVKKI 205
LASEL RL+++ ++AGD S+PL ++TF NE F LL+LK+ SLRK YDGL DVKK
Sbjct: 5467 LASELLRLSLSGMSAGDNSQPLHVATFNNEWHPNFHLLSLKHYSSLRKPYDGLW*DVKKT 5288
Query: 206 EEVVYDLSIRGLNKE 220
EEV Y LSI+G NKE
Sbjct: 5287 EEVFYILSIQGFNKE 5243
Score = 65.9 bits (159), Expect(2) = 2e-27
Identities = 51/151 (33%), Positives = 74/151 (48%), Gaps = 7/151 (4%)
Frame = -1
Query: 1 MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK 60
MS + +FV LQG + + +K+ +L+QTA E++ G
Sbjct: 5895 MSATEIFVELQGFCLPRRTSARKSKKL*-SLQQTA*EIVNSTTTCPSGCWVSG------H 5737
Query: 61 AREHFGTVRTQMESLKTKFPADQY-------YRFHEHWRFVLQRLVFLASFVVYLETETL 113
++E F ++ T S T +++ + HEHWRFVL V V LETET
Sbjct: 5736 SKEVFESLGTFWYSKNTPNTSEEQVAC*TVCHEVHEHWRFVLPHTVVFPELVACLETET- 5560
Query: 114 VTREAVAEILGIEADRERGFHLDIEDYLSGV 144
EA+ EI IE D+E+ FH+D+ED LSGV
Sbjct: 5559 --PEAITEIRVIEPDKEKRFHVDVEDPLSGV 5473
>gb|AF197019.1|AF197019 Pan troglodytes translin pseudogene, partial sequence
Length = 949
Score = 77.8 bits (190), Expect(2) = 4e-27
Identities = 44/75 (58%), Positives = 55/75 (72%), Gaps = 1/75 (1%)
Frame = -2
Query: 147 LASELARLAVNSVTAGDYSRPLRISTFINELDSGFRLLNLKN-DSLRKRYDGLKYDVKKI 205
LASEL RL+++ ++AGD S+PL ++TF NE LL+LK+ SLRK YDGL DVKK
Sbjct: 513 LASELLRLSLSGMSAGDNSQPLHVATFNNEWHPXXXLLSLKHYSSLRKPYDGLW*DVKKT 334
Query: 206 EEVVYDLSIRGLNKE 220
EEV Y LSI+G NKE
Sbjct: 333 EEVFYILSIQGFNKE 289
Score = 68.2 bits (165), Expect(2) = 4e-27
Identities = 52/151 (34%), Positives = 75/151 (49%), Gaps = 7/151 (4%)
Frame = -3
Query: 1 MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK 60
MS + +FV LQG + + +K+ +L+QTA E++ G
Sbjct: 941 MSATEIFVELQGFCLPRRTSARKSKKL*-SLQQTA*EIVNSTTTCPSGCWVSG------H 783
Query: 61 AREHFGTVRTQMESLKTKFPADQY-------YRFHEHWRFVLQRLVFLASFVVYLETETL 113
++E F ++ T S T +++ + HEHWRFVLQ V V LETET
Sbjct: 782 SKEVFESLGTFWYSKNTPNTSEEQVAC*TVCHEVHEHWRFVLQHTVVFPELVACLETET- 606
Query: 114 VTREAVAEILGIEADRERGFHLDIEDYLSGV 144
EA+ EI IE D+E+ FH+D+ED LSGV
Sbjct: 605 --PEAITEIRVIEPDKEKRFHVDVEDPLSGV 519
>gb|AF196998.1|AF196998 Homo sapiens translin pseudogene, partial sequence
Length = 951
Score = 77.8 bits (190), Expect(2) = 2e-26
Identities = 44/75 (58%), Positives = 55/75 (72%), Gaps = 1/75 (1%)
Frame = -2
Query: 147 LASELARLAVNSVTAGDYSRPLRISTFINELDSGFRLLNLKN-DSLRKRYDGLKYDVKKI 205
LASEL RL+++ ++AGD S+PL ++TF NE LL+LK+ SLRK YDGL DVKK
Sbjct: 515 LASELLRLSLSGMSAGDNSQPLHVATFNNEWHPXXXLLSLKHYSSLRKPYDGLW*DVKKT 336
Query: 206 EEVVYDLSIRGLNKE 220
EEV Y LSI+G NKE
Sbjct: 335 EEVFYILSIQGFNKE 291
Score = 67.4 bits (163), Expect = 8e-10
Identities = 32/58 (55%), Positives = 40/58 (68%)
Frame = -1
Query: 26 KVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQKAREHFGTVRTQMESLKTKFPADQ 83
K + + + +LTLPQ V QGAGFQ IPK+C KA EHFGTV+T LK+K PA+Q
Sbjct: 870 KSCRVYNKQLKRLLTLPQRVRQGAGFQGIPKRCLKA*EHFGTVKTHPTPLKSKLPAEQ 697
Score = 65.9 bits (159), Expect(2) = 2e-26
Identities = 51/151 (33%), Positives = 74/151 (48%), Gaps = 7/151 (4%)
Frame = -3
Query: 1 MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK 60
MS + +FV LQG + + +K+ +L+QTA E++ G
Sbjct: 943 MSATEIFVELQGFCLPRRTSARKSKKL*-SLQQTA*EIVNSTTTCPSGCWVSG------H 785
Query: 61 AREHFGTVRTQMESLKTKFPADQY-------YRFHEHWRFVLQRLVFLASFVVYLETETL 113
++E F ++ T S T +++ + HEHWRFVL V V LETET
Sbjct: 784 SKEVFESLGTFWYSKNTPNTSEEQVAC*TVCHEVHEHWRFVLPHTVVFPELVACLETET- 608
Query: 114 VTREAVAEILGIEADRERGFHLDIEDYLSGV 144
EA+ EI IE D+E+ FH+D+ED LSGV
Sbjct: 607 --PEAITEIRVIEPDKEKRFHVDVEDPLSGV 521
>emb|Y12567.1|HSTRANEX6 H.sapiens gene encoding translin, exon 6
Length = 241
Score = 120 bits (301), Expect = 8e-26
Identities = 59/63 (93%), Positives = 62/63 (97%)
Frame = +3
Query: 152 ARLAVNSVTAGDYSRPLRISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKIEEVVYD 211
+RL+VNSVTAGDYSRPL ISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKK+EEVVYD
Sbjct: 51 SRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYD 230
Query: 212 LSI 214
LSI
Sbjct: 231 LSI 239
>emb|Y12570.1|MMTRANEX4 M.musculus gene encoding translin, exon 4
Length = 212
Score = 78.2 bits (191), Expect = 5e-13
Identities = 37/41 (90%), Positives = 39/41 (94%)
Frame = +1
Query: 84 YYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAEILG 124
+ RFHEHWRFVLQRLVFLA+FVVYLETETLVTREAV EILG
Sbjct: 43 FCRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILG 165
>emb|Y12565.1|HSTRANEX4 H.sapiens gene encoding translin, exon 4
Length = 216
Score = 77.8 bits (190), Expect = 6e-13
Identities = 37/39 (94%), Positives = 38/39 (96%)
Frame = +1
Query: 86 RFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAEILG 124
RFHEHWRFVLQRLVFLA+FVVYLETETLVTREAV EILG
Sbjct: 49 RFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILG 165
>emb|AL136538.1|SPAC30 S.pombe chromosome I cosmid c30
Length = 36315
Score = 76.3 bits (186), Expect = 2e-12
Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 14/92 (15%)
Frame = -2
Query: 130 ERGFHLDIEDYLSGVLTLASEL--------------ARLAVNSVTAGDYSRPLRISTFIN 175
E FHL IE YL VL+L SEL AR +VNSV +G+Y P I
Sbjct: 8372 ESTFHLSIEQYLHAVLSLCSELVYILFNNPN*HNF*ARQSVNSVISGNYHIPFEALNTIQ 8193
Query: 176 ELDSGFRLLNLKNDSLRKRYDGLKYDVKKIEE 207
++ S F++L+LKNDSLR+ +DGLKYD+K+ E+
Sbjct: 8192 KVHSSFQVLSLKNDSLRRHFDGLKYDLKRSED 8097
>gb|AC006922.6|AC006922 Arabidopsis thaliana chromosome II section 201 of 255 of the complete
sequence. Sequence from clones T1J8
Length = 114950
Score = 70.9 bits (172), Expect = 8e-11
Identities = 37/96 (38%), Positives = 52/96 (53%), Gaps = 28/96 (29%)
Frame = +2
Query: 150 ELARLAVNSVTAGDYSRPLRISTFINELDSGFRLLNLKNDSLRKRYD------------- 196
E R VN VTAGDY P ++ F+ +L + FR+LNL+ND LRK++D
Sbjct: 107450 EQPRYVVNRVTAGDYDCPRKVMNFLTDLHAAFRMLNLRNDFLRKKFDSKSYISLTALLSP 107629
Query: 197 ---------------GLKYDVKKIEEVVYDLSIRGL 217
G+KYD++++EEV YD+ IRGL
Sbjct: 107630 FAMVT*KKNRF*HVTGMKYDLRRVEEVYYDVKIRGL 107737
>ref|NM_016909.1| Mus musculus translin-associated factor X (Tsnax), mRNA
Length = 2410
Score = 66.6 bits (161), Expect = 1e-09
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 19/233 (8%)
Frame = +3
Query: 3 VSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQKAR 62
V F + Q L A D E + K+ + + ++ + L +H+ D+ + ++
Sbjct: 303 VMLAFKSFQQELDARHDKYERLVKLSRDITVESKRTIFL---LHRITSAPDMEEILTESE 473
Query: 63 EHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAEI 122
VR ++ + + + ++FH LQ V SF +++T +L++ E + +
Sbjct: 474 SKLDGVRQKILQVAQELSGEDMHQFHRAVTTGLQEYVEAVSFQHFIKTRSLISMEEINKQ 653
Query: 123 LGIEAD-------------RERGF-----HLDIEDYLSGVLTLASELARLAVNSVTAGDY 164
L A+ +E+ L DYL GV L EL R+ +NSV GD
Sbjct: 654 LTFTAEDSGKESKTPPAEGQEKQLVTWRLKLTPVDYLLGVADLTGELMRMCINSVGNGDI 833
Query: 165 SRPLRISTFINELDSGFRLL-NLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRG 216
P +S F+ ++ GF + N + K+ LK + K+E Y L +RG
Sbjct: 834 DTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKVENACYALKVRG 992
>gb|AF187040.1|AF187040 Mus musculus translin associated protein X (Trax) mRNA, complete
cds
Length = 2410
Score = 66.6 bits (161), Expect = 1e-09
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 19/233 (8%)
Frame = +3
Query: 3 VSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQKAR 62
V F + Q L A D E + K+ + + ++ + L +H+ D+ + ++
Sbjct: 303 VMLAFKSFQQELDARHDKYERLVKLSRDITVESKRTIFL---LHRITSAPDMEEILTESE 473
Query: 63 EHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAEI 122
VR ++ + + + ++FH LQ V SF +++T +L++ E + +
Sbjct: 474 SKLDGVRQKILQVAQELSGEDMHQFHRAVTTGLQEYVEAVSFQHFIKTRSLISMEEINKQ 653
Query: 123 LGIEAD-------------RERGF-----HLDIEDYLSGVLTLASELARLAVNSVTAGDY 164
L A+ +E+ L DYL GV L EL R+ +NSV GD
Sbjct: 654 LTFTAEDSGKESKTPPAEGQEKQLVTWRLKLTPVDYLLGVADLTGELMRMCINSVGNGDI 833
Query: 165 SRPLRISTFINELDSGFRLL-NLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRG 216
P +S F+ ++ GF + N + K+ LK + K+E Y L +RG
Sbjct: 834 DTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKVENACYALKVRG 992
>gb|BC004611.1|BC004611 Mus musculus, translin-associated factor X, clone MGC:7979
IMAGE:3585400, mRNA, complete cds
Length = 2309
Score = 66.6 bits (161), Expect = 1e-09
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 19/233 (8%)
Frame = +1
Query: 3 VSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQKAR 62
V F + Q L A D E + K+ + + ++ + L +H+ D+ + ++
Sbjct: 205 VMLAFKSFQQELDARHDKYERLVKLSRDITVESKRTIFL---LHRITSAPDMEEILTESE 375
Query: 63 EHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAEI 122
VR ++ + + + ++FH LQ V SF +++T +L++ E + +
Sbjct: 376 SKLDGVRQKILQVAQELSGEDMHQFHRAVTTGLQEYVEAVSFQHFIKTRSLISMEEINKQ 555
Query: 123 LGIEAD-------------RERGF-----HLDIEDYLSGVLTLASELARLAVNSVTAGDY 164
L A+ +E+ L DYL GV L EL R+ +NSV GD
Sbjct: 556 LTFTAEDSGKESKTPPAEGQEKQLVTWRLKLTPVDYLLGVADLTGELMRMCINSVGNGDI 735
Query: 165 SRPLRISTFINELDSGFRLL-NLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRG 216
P +S F+ ++ GF + N + K+ LK + K+E Y L +RG
Sbjct: 736 DTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKVENACYALKVRG 894
>gb|AF262357.1|AF262357 Rattus norvegicus trax mRNA, complete cds
Length = 1501
Score = 65.5 bits (158), Expect = 3e-09
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 19/233 (8%)
Frame = +2
Query: 3 VSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQKAR 62
V F + Q L D E + K+ + + ++ + L +H+ D+ + ++
Sbjct: 254 VMLAFKSFQQELDTRHDKYERLVKLSRDITVESKRTIFL---LHRITSAPDMEEILTESE 424
Query: 63 EHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAEI 122
VR +M + + + ++FH LQ V SF ++ T +L++ E +
Sbjct: 425 SKLDGVRQKMLQVAQELSGEDMHQFHRAVTTGLQEYVEAVSFQHFIRTRSLISMEEINRQ 604
Query: 123 LGIEADRERG----------------FHLDIE--DYLSGVLTLASELARLAVNSVTAGDY 164
L D + L I DYL GV L EL R+ +NSV GD
Sbjct: 605 LTFTTDDSGKESKAPPADGQDKQLVTWRLKITPVDYLLGVADLTGELMRMCINSVGNGDI 784
Query: 165 SRPLRISTFINELDSGFRLL-NLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRG 216
P +S F+ ++ GF + N + K+ LK + K+E Y L +RG
Sbjct: 785 DTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLSKVENACYALKVRG 943
>ref|NM_022262.1| Rattus norvegicus translin-associated factor X (Tsnax), mRNA
Length = 873
Score = 65.5 bits (158), Expect = 3e-09
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 19/233 (8%)
Frame = +1
Query: 3 VSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQKAR 62
V F + Q L D E + K+ + + ++ + L +H+ D+ + ++
Sbjct: 103 VMLAFKSFQQELDTRHDKYERLVKLSRDITVESKRTIFL---LHRITSAPDMEEILTESE 273
Query: 63 EHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAEI 122
VR +M + + + ++FH LQ V SF ++ T +L++ E +
Sbjct: 274 SKLDGVRQKMLQVAQELSGEDMHQFHRAVTTGLQEYVEAVSFQHFIRTRSLISMEEINRQ 453
Query: 123 LGIEADRERG----------------FHLDIE--DYLSGVLTLASELARLAVNSVTAGDY 164
L D + L I DYL GV L EL R+ +NSV GD
Sbjct: 454 LTFTTDDSGKESKAPPADGQDKQLVTWRLKITPVDYLLGVADLTGELMRMCINSVGNGDI 633
Query: 165 SRPLRISTFINELDSGFRLL-NLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRG 216
P +S F+ ++ GF + N + K+ LK + K+E Y L +RG
Sbjct: 634 DTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLSKVENACYALKVRG 792
>emb|Y12564.1|HSTRANEX3 H.sapiens gene encoding translin, exon 3
Length = 197
Score = 63.2 bits (152), Expect = 2e-08
Identities = 26/34 (76%), Positives = 31/34 (90%)
Frame = +2
Query: 54 IPKKCQKAREHFGTVRTQMESLKTKFPADQYYRF 87
+PK+C KAREHFGTV+T + SLKTKFPA+QYYRF
Sbjct: 50 VPKRCLKAREHFGTVKTHLTSLKTKFPAEQYYRF 151
>ref|XM_094947.1| Homo sapiens similar to translin (LOC168242), mRNA
Length = 374
Score = 63.2 bits (152), Expect = 2e-08
Identities = 43/99 (43%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +3
Query: 101 LASFVVYLETETLVTREAVAEILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVT 160
L V LETET EA+ EI IE D+E+ FH+D+ED LSGV
Sbjct: 135 LPELVACLETET---PEAITEIRVIEPDKEKRFHVDVEDPLSGV---------------- 257
Query: 161 AGDYSRPLRISTFINELDSGFRLLNLKN-DSLRKRYDGL 198
+ PL ++TF NE F LL+LK+ SLRK YDGL
Sbjct: 258 --QFLLPLHVATFNNEWHPNFHLLSLKHYSSLRKPYDGL 368
>gb|BC011797.1|BC011797 Homo sapiens, Similar to translin-associated factor X, clone
MGC:19629 IMAGE:4138517, mRNA, complete cds
Length = 1852
Score = 63.2 bits (152), Expect = 2e-08
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 19/233 (8%)
Frame = +2
Query: 3 VSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQKAR 62
V F + Q L A D E + K+ + + ++ + L + +DI ++
Sbjct: 236 VMLAFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDI---LTESE 406
Query: 63 EHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAEI 122
VR ++ + + + ++FH LQ V SF +++T +L++ + + +
Sbjct: 407 IKLDGVRQKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQ 586
Query: 123 L-------GIE--------ADRERG---FHLDIEDYLSGVLTLASELARLAVNSVTAGDY 164
L G E D++ G + DYL GV L EL R+ +NSV GD
Sbjct: 587 LIFTTEDNGKENKTPSSDAQDKQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGNGDI 766
Query: 165 SRPLRISTFINELDSGFRLL-NLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRG 216
P +S F+ ++ GF + N + K+ LK + K+E Y L +RG
Sbjct: 767 DTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKVENACYALKVRG 925
>ref|NM_005999.1| Homo sapiens translin-associated factor X (TSNAX), mRNA
Length = 2669
Score = 63.2 bits (152), Expect = 2e-08
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 19/233 (8%)
Frame = +2
Query: 3 VSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQKAR 62
V F + Q L A D E + K+ + + ++ + L + +DI ++
Sbjct: 263 VMLAFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDI---LTESE 433
Query: 63 EHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAEI 122
VR ++ + + + ++FH LQ V SF +++T +L++ + + +
Sbjct: 434 IKLDGVRQKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQ 613
Query: 123 L-------GIE--------ADRERG---FHLDIEDYLSGVLTLASELARLAVNSVTAGDY 164
L G E D++ G + DYL GV L EL R+ +NSV GD
Sbjct: 614 LIFTTEDNGKENKTPSSDAQDKQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGNGDI 793
Query: 165 SRPLRISTFINELDSGFRLL-NLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRG 216
P +S F+ ++ GF + N + K+ LK + K+E Y L +RG
Sbjct: 794 DTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKVENACYALKVRG 952
>emb|X95073.1|HSTRAXGEN H.sapiens mRNA for translin associated protein X
Length = 2669
Score = 63.2 bits (152), Expect = 2e-08
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 19/233 (8%)
Frame = +2
Query: 3 VSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQKAR 62
V F + Q L A D E + K+ + + ++ + L + +DI ++
Sbjct: 263 VMLAFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDI---LTESE 433
Query: 63 EHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAEI 122
VR ++ + + + ++FH LQ V SF +++T +L++ + + +
Sbjct: 434 IKLDGVRQKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQ 613
Query: 123 L-------GIE--------ADRERG---FHLDIEDYLSGVLTLASELARLAVNSVTAGDY 164
L G E D++ G + DYL GV L EL R+ +NSV GD
Sbjct: 614 LIFTTEDNGKENKTPSSDAQDKQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGNGDI 793
Query: 165 SRPLRISTFINELDSGFRLL-NLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRG 216
P +S F+ ++ GF + N + K+ LK + K+E Y L +RG
Sbjct: 794 DTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKVENACYALKVRG 952
>gb|BC010376.1|BC010376 Homo sapiens, translin-associated factor X, clone MGC:13527
IMAGE:4283594, mRNA, complete cds
Length = 1837
Score = 63.2 bits (152), Expect = 2e-08
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 19/233 (8%)
Frame = +3
Query: 3 VSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQKAR 62
V F + Q L A D E + K+ + + ++ + L + +DI ++
Sbjct: 219 VMLAFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDI---LTESE 389
Query: 63 EHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAEI 122
VR ++ + + + ++FH LQ V SF +++T +L++ + + +
Sbjct: 390 IKLDGVRQKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQ 569
Query: 123 L-------GIE--------ADRERG---FHLDIEDYLSGVLTLASELARLAVNSVTAGDY 164
L G E D++ G + DYL GV L EL R+ +NSV GD
Sbjct: 570 LIFTTEDNGKENKTPSSDAQDKQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGNGDI 749
Query: 165 SRPLRISTFINELDSGFRLL-NLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRG 216
P +S F+ ++ GF + N + K+ LK + K+E Y L +RG
Sbjct: 750 DTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKVENACYALKVRG 908
>emb|Y12569.1|MMTRANEX3 M.musculus gene encoding translin, exon 3
Length = 197
Score = 60.8 bits (146), Expect = 8e-08
Identities = 25/34 (73%), Positives = 30/34 (87%)
Frame = +2
Query: 54 IPKKCQKAREHFGTVRTQMESLKTKFPADQYYRF 87
+PK+C KAREHF TV+T + SLKTKFPA+QYYRF
Sbjct: 50 VPKRCLKAREHFSTVKTHLTSLKTKFPAEQYYRF 151
>emb|Y12563.1|HSTRANEX2 H.sapiens gene encoding translin, exon 2 (and joined CDS)
Length = 194
Score = 57.8 bits (138), Expect = 7e-07
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +3
Query: 23 EIRKVVQALEQTAREMLTLPQGVHQGAGFQD 53
EIRKVVQ+LEQTARE+LTL QGVHQGAGFQD
Sbjct: 51 EIRKVVQSLEQTAREILTLLQGVHQGAGFQD 143
>emb|Y12568.1|MMTRANEX2 M.musculus gene encoding translin, exon 2 (and joined CDS)
Length = 172
Score = 56.2 bits (134), Expect = 2e-06
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +1
Query: 23 EIRKVVQALEQTAREMLTLPQGVHQGAGFQD 53
EIRKVVQ+LEQTARE+LTL QGVHQG GFQD
Sbjct: 43 EIRKVVQSLEQTAREILTLLQGVHQGTGFQD 135
>gb|AF271269.1|AF271267S3 Homo sapiens translin-like protein (TRAX) gene, exons 4, 5, 6, and
complete cds
Length = 24360
Score = 54.3 bits (129), Expect = 7e-06
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 139 DYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSGFRLL-NLKNDSLRKRYDG 197
DYL GV L EL R+ +NSV GD P +S F+ ++ GF + N + K+
Sbjct: 22272 DYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYT 22451
Query: 198 LKYDVKKIEEVVYDLSIRG 216
LK + K+E Y L +RG
Sbjct: 22452 LKQSLAKVENACYALKVRG 22508
>emb|Y12571.1|MMTRANEX5 M.musculus gene encoding translin, exon 5
Length = 180
Score = 52.0 bits (123), Expect = 4e-05
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +2
Query: 125 IEADRERGFHLDIEDYLSGVLTLASELAR 153
+E DRE+GFHLD+EDYLSGVL LASEL R
Sbjct: 50 VEPDREKGFHLDVEDYLSGVLILASELVR 136
>emb|Y12566.1|HSTRANEX5 H.sapiens gene encoding translin, exon 5
Length = 180
Score = 51.6 bits (122), Expect = 5e-05
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +2
Query: 125 IEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTA 161
+E DRE+GFHLD+EDYLSGVL LASEL V+SVT+
Sbjct: 50 VEPDREKGFHLDVEDYLSGVLILASEL----VSSVTS 148
>emb|AL023705.1|SPCC736 S.pombe chromosome III cosmid c736
Length = 44042
Score = 45.4 bits (106), Expect = 0.003
Identities = 44/217 (20%), Positives = 89/217 (40%), Gaps = 4/217 (1%)
Frame = -2
Query: 7 FVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQKAREHFG 66
F++ + L DQD RE+I ++ + + ++ M+ L GF +PK +
Sbjct: 18904 FLSFKNFLQEDQDKREKIIRLSREITIQSKRMIFLLHQTSSSDGFP-LPKDFDRTSIFEK 18728
Query: 67 TVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVAEILGIE 126
+ ++ESLK + +F LQ V +F +L+T TL++ +
Sbjct: 18727 KIHKELESLKRELAGLNADKFSSACTHGLQEYVEAVTFKFWLQTGTLLSCK--------- 18575
Query: 127 ADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSGF----R 182
D ++ DY+ GV + E+ R V + + + + F+ L
Sbjct: 18574 -DSSFRISINFIDYVLGVCDMTGEIMRFLVTNGSKFSVQQLTQQVKFLRGLHKNCSEIEH 18398
Query: 183 LLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNK 219
L + L+++ ++ + K+E + Y +R +K
Sbjct: 18397 LPSKVKSELQQKLSVMENSISKVEGICYSKILREADK 18287
>emb|AL627362.1|CNS07TIX DNA centromeric region sequence from BAC DP15B03, DP38F06 of chromosome 5
of Podospora anserina
Length = 156244
Score = 44.7 bits (104), Expect = 0.006
Identities = 43/162 (26%), Positives = 67/162 (40%), Gaps = 40/162 (24%)
Frame = +2
Query: 95 LQRLVFLASFVVYLETETLVTREAVAEIL------GIEADRERGF--------------- 133
L+ LV +F+ YL+T+TL+T E + I+ GI +
Sbjct: 100649 LEELVEALTFLHYLKTQTLITPEQLTPIMEDLVRKGITPSEDVAMTDASEPAAAAPEQPL 100828
Query: 134 -------HLDIEDYLSGVLTLASELARLAVNSVT---------AGDYSRPLRISTFINEL 177
L +DYL GV L E+ R A S AG +P I ++EL
Sbjct: 100829 EKETPKVSLTQDDYLYGVFDLTGEMMRFATTSTALTGTMAGGGAGGDEQPRTIVEDMHEL 101008
Query: 178 DSGFRLLNLKNDSL---RKRYDGLKYDVKKIEEVVYDLSIRG 216
S F +L + + K+ + + V+K+E + YD +IRG
Sbjct: 101009 GSFFEMLPVGQGNRFQWEKKLEVTRQSVQKVERLGYDRTIRG 101134
>emb|Z81536.1|CEF40D4 Caenorhabditis elegans cosmid F40D4, complete sequence
Length = 37994
Score = 34.7 bits (78), Expect = 6.0
Identities = 19/48 (39%), Positives = 30/48 (61%)
Frame = -1
Query: 174 INELDSGFRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKEA 221
++E++ FR N K D +K YD +K DV I +VYD+ RG+N ++
Sbjct: 4928 LDEIEKRFR--NAKID--QKNYDQMKLDVGTITSLVYDMKHRGMNVDS 4797
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 12, 2002 2:19 AM
Number of letters in database: 566,364,212
Number of sequences in database: 1,171,752
Lambda K H
0.320 0.137 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 927,211,050
Number of Sequences: 1171752
Number of extensions: 11075746
Number of successful extensions: 45486
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 23440
Number of HSP's successfully gapped in prelim test: 2195
Number of HSP's that attempted gapping in prelim test: 19308
Number of HSP's gapped (non-prelim): 31029
length of query: 229
length of database: 1,620,443,836
effective HSP length: 130
effective length of query: 99
effective length of database: 1,468,116,076
effective search space: 145343491524
effective search space used: 145343491524
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)