TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(424 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,171,752 sequences; 566,364,212 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
gb|AF279275.1|AF279275 Gallus gallus Rbap46 polypeptide mRN... 884 0.0
ref|NM_009031.1| Mus musculus retinoblastoma binding protei... 839 0.0
gb|U35142.1|MMU35142 Mus musculus retinoblastoma-binding pr... 839 0.0
gb|BC003785.1|BC003785 Mus musculus, retinoblastoma binding... 839 0.0
ref|NM_002893.2| Homo sapiens retinoblastoma binding protei... 838 0.0
emb|X72841.1|HSIEF7442 H.sapiens IEF 7442 mRNA 838 0.0
gb|U35143.1|HSU35143 Human retinoblastoma-binding protein (... 838 0.0
ref|NM_031816.1| Rattus norvegicus retinoblastoma binding p... 838 0.0
gb|AF090306.1|AF090306 Rattus norvegicus retinoblastoma bin... 838 0.0
ref|XM_010272.2| Homo sapiens retinoblastoma binding protei... 560 0.0
ref|NM_005610.1| Homo sapiens retinoblastoma binding protei... 801 0.0
emb|X74262.1|HSRBAP48 H.sapiens RbAp48 mRNA encoding retino... 801 0.0
ref|XM_018112.5| Homo sapiens retinoblastoma binding protei... 801 0.0
gb|BC003092.1|BC003092 Homo sapiens, Similar to retinoblast... 801 0.0
ref|NM_009030.1| Mus musculus retinoblastoma binding protei... 799 0.0
gb|U35141.1|MMU35141 Mus musculus retinoblastoma-binding pr... 799 0.0
gb|AF097750.1|AF097750 Gallus gallus chromatin assembly fac... 797 0.0
gb|AF073787.1|AF073787 Xenopus laevis retinoblastoma A asso... 784 0.0
emb|X71810.1|HSIEF9306 H.sapiens IEF 9306 mRNA 776 0.0
gb|U62388.1|DMU62388 Drosophila melanogaster chromatin asse... 773 0.0
ref|NM_079630.1| Drosophila melanogaster Chromatin assembly... 773 0.0
gb|AY061408.1| Drosophila melanogaster LD33761 full length ... 773 0.0
gb|AE003708.2|AE003708 Drosophila melanogaster genomic scaf... 453 0.0
gb|AC009904.7| Drosophila melanogaster, chromosome 3R, regi... 453 0.0
ref|XM_030409.1| Homo sapiens similar to retinoblastoma-bin... 754 0.0
ref|XM_030423.1| Homo sapiens similar to retinoblastoma bin... 729 0.0
gb|BC015123.1|BC015123 Homo sapiens, Similar to retinoblast... 694 0.0
emb|AL390237.9|AL390237 Human DNA sequence from clone RP11-... 360 0.0
gb|AE000658.1|HUAE000658 Homo sapiens T-cell receptor alpha... 576 0.0
ref|NM_060151.1| chromatin assembly factor 1 P55 subunit like 630 e-179
gb|AF116530.1|AF116530 Caenorhabditis elegans synthetic mul... 630 e-179
ref|XM_069157.2| Homo sapiens similar to CHROMATIN ASSEMBLY... 628 e-178
ref|XM_063256.2| Homo sapiens similar to retinoblastoma bin... 621 e-176
gb|AY059874.1| Arabidopsis thaliana WD-40 repeat protein MS... 585 e-165
ref|NM_125208.1| WD-40 repeat protein MSI1 (sp|O22467); als... 585 e-165
gb|AF016846.1|AF016846 Arabidopsis thaliana WD-40 repeat pr... 585 e-165
gb|AF016845.1|AF016845 Lycopersicon esculentum WD-40 repeat... 568 e-160
emb|Z81097.1|CEK07A1 Caenorhabditis elegans cosmid K07A1, c... 302 e-159
gb|AF440219.1|AF440219 Zea mays cultivar B73 MSI type nucle... 564 e-159
emb|AL512427.10|AL512427 Human DNA sequence from clone RP11... 561 e-158
ref|XM_069195.1| Homo sapiens similar to Chromatin assembly... 518 e-145
ref|XM_069182.1| Homo sapiens similar to retinoblastoma A a... 518 e-145
ref|NM_060150.1| retinablastoma-binding protein RBAP46 like 459 e-127
gb|AF297468.1|AF297468 Schistosoma mansoni strain NMRI chro... 442 e-122
gb|AY056814.1| Arabidopsis thaliana At2g16780/T24I21.19 mRN... 440 e-121
ref|NM_127230.1| putative WD-40 repeat protein, MSI2 440 e-121
gb|AF016847.1|AF016847 Arabidopsis thaliana WD-40 repeat pr... 438 e-121
ref|NM_119671.1| WD-40 repeat protein (MSI3) 434 e-120
gb|AF016848.1|AF016848 Arabidopsis thaliana WD-40 repeat pr... 432 e-119
emb|AL031324.2|SPCC1672 S.pombe chromosome III cosmid c1672 353 e-110
emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of E... 315 4e-84
dbj|AB019228.1|AB019228 Arabidopsis thaliana genomic DNA, c... 166 3e-79
emb|Z97210.2|SPAC29A4 S.pombe chromosome I cosmid c29A4 248 5e-76
gb|U18795.1|SCE9669 Saccharomyces cerevisiae chromosome V c... 277 1e-72
gb|AF384037.1|AF384037 Zea mays nucleosome/chromatin assemb... 231 1e-58
gb|AF250047.1|AF250047 Zea mays WD-repeat protein RBAP1 (rb... 230 2e-58
gb|AY057655.1| Arabidopsis thaliana At2g19520/F3P11.12 mRNA... 226 2e-57
ref|NM_127510.1| putative WD-40 repeat protein, MSI4 226 2e-57
gb|AY059799.1| Arabidopsis thaliana putative WD-40 repeat p... 226 2e-57
gb|AF028711.1|AF028711 Arabidopsis thaliana WD-40 repeat pr... 226 3e-57
emb|Y18519.1|SLA18519 Silene latifolia mRNA for X1 protein 221 1e-55
emb|Y18517.1|SLA18517 Silene latifolia mRNA for Y1 protein 221 1e-55
ref|NM_119118.1| WD-40 repeat - like protein 216 3e-54
emb|AL114645.1|CNS01BST Botrytis cinerea strain T4 cDNA lib... 212 6e-53
emb|Z36064.1|SCYBR195C S.cerevisiae chromosome II reading f... 188 9e-46
emb|Z21487.1|SCCHRIIFG S.cerevisiae RIM, MSI1, PGI, and rib... 188 9e-46
gb|M27300.1|YSCMSI1 S.cerevisiae MSI1 gene, complete cds 188 9e-46
emb|Z98944.1|SPAC25H1 S.pombe chromosome I cosmid c25H1 187 1e-45
ref|XM_067237.1| Homo sapiens similar to Rbap46 polypeptide... 172 7e-41
emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosom... 134 3e-39
emb|AL035522.1|ATT12J5 Arabidopsis thaliana DNA chromosome ... 134 3e-39
emb|AL022023.1|ATM4E13 Arabidopsis thaliana DNA chromosome ... 134 3e-39
gb|AC005825.3|AC005825 Arabidopsis thaliana chromosome II s... 154 7e-39
ref|NM_127512.1| putative WD-40 repeat protein 157 1e-36
gb|AF370506.1|AF370506 Arabidopsis thaliana putative WD-40 ... 157 1e-36
emb|AL353012.1|SPBC1711 S.pombe chromosome II cosmid c1711 131 1e-28
gb|AE003785.2|AE003785 Drosophila melanogaster genomic scaf... 128 9e-28
gb|AC007054.24|AC007054 Drosophila melanogaster, chromosome... 128 9e-28
gb|AY071477.1| Drosophila melanogaster RE55020 full length ... 128 9e-28
emb|Z48622.1|SC9553 S.cerevisiae chromosome XIII cosmid 9553 120 2e-25
gb|BC008121.1|BC008121 Mus musculus, Similar to glutamate r... 118 9e-25
ref|NM_065690.1| Caenorhabditis elegans 117 2e-24
gb|AF337808.1|AF337808 Homo sapiens glutamate rich WD repea... 117 2e-24
ref|NM_031485.1| Homo sapiens glutamate rich WD repeat prot... 117 2e-24
gb|BC002440.1|BC002440 Homo sapiens, Similar to CG12792 gen... 117 2e-24
dbj|D30014.1|RICEN20522 Rice mRNA EN205, partial sequence 90 2e-24
gb|M21696.1|YSCPPG S.cerevisiae phosphoglucoisomerase 1 (PG... 104 1e-20
ref|NM_102666.1| peroxisomal targeting signal type 2 receptor 92 7e-17
gb|AF130973.1|AF130973 Arabidopsis thaliana peroxisomal tar... 92 7e-17
gb|AC021043.4|AC021043 Arabidopsis thaliana chromosome I BA... 92 7e-17
gb|AF430070.1|AF430070 Gossypium hirsutum peroxisomal targe... 91 2e-16
gb|AC024818.1| Caenorhabditis elegans cosmid Y54H5A, comple... 91 3e-16
ref|NM_014409.1| Homo sapiens TAF5-like RNA polymerase II, ... 90 4e-16
gb|AF069736.1|AF069736 Homo sapiens PCAF associated factor ... 90 4e-16
emb|AJ009770.1|HSA9770 Homo sapiens mRNA for putative trans... 90 4e-16
ref|XM_050783.1| Homo sapiens similar to TAF5-like RNA poly... 90 4e-16
ref|XM_001872.3| Homo sapiens TAF5-like RNA polymerase II, ... 90 4e-16
dbj|AP003593.1|AP003593 Nostoc sp. PCC 7120 DNA, complete g... 89 6e-16
gb|BC006268.1|BC006268 Homo sapiens, peroxisomal biogenesis... 89 1e-15
gb|U76560.1|HSU76560 Human peroxisome targeting signal 2 re... 89 1e-15
ref|NM_000288.1| Homo sapiens peroxisomal biogenesis factor... 89 1e-15
gb|U88871.1|HSU88871 Human HsPex7p (HsPEX7) mRNA, complete cds 89 1e-15
gb|BC013550.1|BC013550 Mus musculus, Similar to PCAF associ... 88 1e-15
emb|AL023833.1|CEY21F11A Caenorhabditis elegans cosmid Y21F... 88 1e-15
gb|L24437.1|ATHCOP1A Arabidopsis thaliana (COP1) regulatory... 87 2e-15
ref|NM_120923.1| katanin p80 subunit - like protein 87 2e-15
gb|AF443204.1|AF443204 Chlamydomonas reinhardtii WD40-repea... 86 5e-15
gb|AF315714.1|AF315714 Ipomoea nil COP1 mRNA, complete cds 86 5e-15
gb|AE003554.2|AE003554 Drosophila melanogaster genomic scaf... 86 5e-15
gb|AC010019.4| Drosophila melanogaster 3L BAC RP98-6F6 (Ros... 86 5e-15
dbj|AP003581.1|AP003581 Nostoc sp. PCC 7120 DNA, complete g... 86 6e-15
ref|XM_081279.1| similar to LD24014p (D. melanogaster), mRNA 85 1e-14
dbj|AK004687.1|AK004687 Mus musculus adult male lung cDNA, ... 85 1e-14
ref|NM_128855.1| photomorphogenesis repressor (COP1) 85 1e-14
ref|NM_008822.1| Mus musculus peroxisome biogenesis factor ... 85 1e-14
gb|U69171.1|MMU69171 Mus musculus peroxisomal PTS2 receptor... 85 1e-14
gb|AY051695.1| Drosophila melanogaster LD24014 full length ... 85 1e-14
gb|U75309.1|HSU75309 Human TBP-associated factor (hTAFII100... 84 2e-14
ref|NM_128165.1| expressed protein 84 2e-14
ref|NM_122250.1| putative protein 84 2e-14
ref|NM_006951.1| Homo sapiens TATA box binding protein (TBP... 84 2e-14
emb|X95525.1|HSTAFII10 H.sapiens mRNA for TAFII100 protein 84 2e-14
gb|U80191.1|HSU80191 Human TFIID subunit TAFII100 mRNA, com... 84 2e-14
ref|XM_031978.3| Homo sapiens TAF5 RNA polymerase II, TATA ... 84 2e-14
gb|AF242546.1|AF242546 Homo sapiens YTM1 mRNA, complete cds 83 4e-14
gb|AF250048.1|AF250048 Zea mays WD-repeat protein RBAP2 (rb... 83 4e-14
ref|XM_087024.1| Homo sapiens WD repeat domain 12 (WDR12), ... 83 5e-14
ref|NM_018256.2| Homo sapiens WD repeat domain 12 (WDR12), ... 83 5e-14
dbj|AK022782.1|AK022782 Homo sapiens cDNA FLJ12720 fis, clo... 83 5e-14
dbj|AK022781.1|AK022781 Homo sapiens cDNA FLJ12719 fis, clo... 83 5e-14
dbj|AK001743.1|AK001743 Homo sapiens cDNA FLJ10881 fis, clo... 83 5e-14
dbj|AK056092.1|AK056092 Homo sapiens cDNA FLJ31530 fis, clo... 83 5e-14
gb|BC008082.1|BC008082 Homo sapiens, clone MGC:835 IMAGE:30... 83 5e-14
gb|AF029984.1|AF029984 Lycopersicon esculentum COP1 homolog... 82 1e-13
dbj|AK016611.1|AK016611 Mus musculus adult male testis cDNA... 82 1e-13
dbj|AK007500.1|AK007500 Mus musculus 10 day old male pancre... 82 1e-13
gb|BC004748.1|BC004748 Mus musculus, WD repeat domain 12, c... 82 1e-13
gb|AY059432.1| Mus musculus MTA.A10.069 WD repeat domain 12... 82 1e-13
gb|AY059431.1| Mus musculus WD repeat domain 12 (Wdr12) mRN... 82 1e-13
ref|NM_021312.1| Mus musculus WD repeat domain 12 (Wdr12), ... 82 1e-13
dbj|AB041608.1|AB041608 Mus musculus brain cDNA, clone MNCb... 82 1e-13
gb|AF239765.1|AF239765 Mus musculus nuclear protein Ytm1p m... 82 1e-13
ref|NM_106276.1| unknown protein 81 2e-13
gb|AF115313.1|AF115313 Thermomonospora curvata PkwR (pkwR) ... 80 4e-13
dbj|AK003477.1|AK003477 Mus musculus 18 days embryo whole b... 74 5e-13
dbj|AB044749.1|AB044749 Homo sapiens mRNA for WDC146, compl... 79 6e-13
gb|U49437.1|BGU49437 Biomphalaria glabrata RACK mRNA, compl... 79 8e-13
ref|NM_005647.1| Homo sapiens transducin (beta)-like 1 (TBL... 79 1e-12
emb|Y12781.1|HSTBL1 Homo sapiens mRNA for transducin (beta)... 79 1e-12
ref|XM_010334.6| Homo sapiens similar to transducin (beta)-... 79 1e-12
emb|X61480.1|DDCORONIN D.discoideum mRNA for coronin 79 1e-12
dbj|AP003592.1|AP003592 Nostoc sp. PCC 7120 DNA, complete g... 78 2e-12
dbj|AP003588.1|AP003588 Nostoc sp. PCC 7120 DNA, complete g... 78 2e-12
gb|AF025330.1|AF025330 Danio rerio receptor for activated p... 78 2e-12
ref|NM_064584.1| six WD40 repeats 78 2e-12
ref|XM_092154.1| Homo sapiens similar to F-box protein FBW7... 78 2e-12
ref|NM_119703.1| putative protein 77 2e-12
ref|NM_101904.1| hypothetical protein 77 3e-12
gb|AF151110.1|AF151110 Mus musculus COP1 protein (Cop1) mRN... 76 5e-12
ref|NM_057921.1| Drosophila melanogaster Receptor of activa... 76 5e-12
ref|XM_040554.4| Homo sapiens similar to similar to constit... 76 5e-12
dbj|AK001278.1|AK001278 Homo sapiens cDNA FLJ10416 fis, clo... 76 5e-12
gb|AY071661.1| Drosophila melanogaster RE74715 full length ... 76 5e-12
ref|NM_022457.3| Homo sapiens similar to constitutive photo... 76 5e-12
dbj|AK025789.1|AK025789 Homo sapiens cDNA: FLJ22136 fis, cl... 76 5e-12
ref|XM_059513.2| Homo sapiens similar to constitutive photo... 76 5e-12
ref|NG_000668.1| Drosophila melanogaster ebi (ebi) on chrom... 76 7e-12
gb|AC005762.1|AC005762 Drosophila melanogaster DNA sequence... 76 7e-12
ref|NG_000510.1| Drosophila melanogaster alpha-Adaptin (alp... 76 7e-12
ref|NM_057981.1| Drosophila melanogaster ebi (ebi), transcr... 76 7e-12
gb|AE003589.2|AE003589 Drosophila melanogaster genomic scaf... 76 7e-12
gb|AF146345.1|AF146345 Drosophila melanogaster Ebi mRNA, co... 76 7e-12
ref|NG_000079.1| Drosophila melanogaster Ribosomal protein ... 76 7e-12
gb|AY050883.1| Arabidopsis thaliana unknown protein (AT4g18... 75 9e-12
gb|AY056430.1| Arabidopsis thaliana AT4g18900/F13C5_70 mRNA... 75 9e-12
ref|NM_118007.1| Expressed protein 75 9e-12
gb|AF394913.1|AF394913 Rosa hybrid cultivar photoregulatory... 75 9e-12
dbj|AP003597.1|AP003597 Nostoc sp. PCC 7120 DNA, complete g... 75 9e-12
gb|BC018399.1|BC018399 Mus musculus, hypothetical protein s... 75 1e-11
ref|NM_118006.1| putative protein 75 1e-11
ref|NM_018096.1| Homo sapiens hypothetical protein similar ... 75 1e-11
dbj|AK001320.1|AK001320 Homo sapiens cDNA FLJ10458 fis, clo... 75 1e-11
dbj|AB026648.1|AB026648 Arabidopsis thaliana genomic DNA, c... 75 1e-11
emb|X98130.1|AT81KBGEN A.thaliana 81kb genomic sequence 75 1e-11
gb|BC012075.1|BC012075 Homo sapiens, hypothetical protein s... 75 1e-11
emb|X97488.1|ATORF10 A.thaliana mRNA for unknown protein, O... 75 1e-11
gb|BC002884.1|BC002884 Homo sapiens, hypothetical protein s... 75 1e-11
ref|NM_113575.1| transcriptional regulator protein, putative 75 1e-11
dbj|AP003582.1|AP003582 Nostoc sp. PCC 7120 DNA, complete g... 75 1e-11
gb|AC002333.2|AC002333 Arabidopsis thaliana chromosome II s... 75 1e-11
ref|NM_129939.1| putative splicing factor 75 1e-11
gb|AF323585.1|AF323585 Podospora anserina beta transducin-l... 74 3e-11
gb|U72205.1|TBU72205 Trypanosoma brucei activated protein k... 74 3e-11
dbj|D17526.1|TOBARCA Tobacco mRNA for G protein beta subuni... 74 3e-11
gb|AF336287.1|AF336287 Gossypium hirsutum WD1521 (wd1522) m... 74 3e-11
gb|AF323584.1|AF323584 Podospora anserina beta transducin-l... 74 3e-11
gb|AF323583.1|AF323583 Podospora anserina beta transducin-l... 74 3e-11
gb|AF323582.1|AF323582 Podospora anserina beta transducin-l... 74 3e-11
dbj|AB022686.1|AB022686 Lycopersicon esculentum mRNA for Le... 74 3e-11
gb|AF049902.1| Trypanosoma brucei rhodesiense activated pro... 74 3e-11
gb|U96491.1|DMU96491 Drosophila melanogaster RACK1 (rack1) ... 73 4e-11
emb|AJ271728.1|ATH271728 Arabidopsis thaliana oasB gene for... 73 6e-11
ref|NG_000341.1| Drosophila melanogaster cactus (cact) on c... 72 7e-11
gb|AF069737.1|AF069737 Xenopus laevis notchless (nle) mRNA,... 72 7e-11
emb|AL590450.1|CNS07EGH chromosome XI of strain GB-M1 of En... 72 7e-11
ref|NM_058153.1| Drosophila melanogaster fizzy (fzy), trans... 72 7e-11
gb|AC092398.1|AC092398 Drosophila melanogaster, chromosome ... 72 7e-11
ref|NG_000449.1| Drosophila melanogaster cornichon (cni) on... 72 7e-11
ref|NG_000818.1| Drosophila melanogaster fizzy (fzy) on chr... 72 7e-11
gb|AE003415.1|DROSADH09 Drosophila melanogaster, chromosome... 72 7e-11
gb|U22419.1|DMU22419 Drosophila melanogaster fizzy (fzy) mR... 72 7e-11
gb|AE003650.1|AE003650 Drosophila melanogaster genomic scaf... 72 7e-11
gb|BC019093.1|BC019093 Homo sapiens, guanine nucleotide bin... 72 1e-10
dbj|AK012649.1|AK012649 Mus musculus 10, 11 days embryo who... 72 1e-10
gb|BC000366.1|BC000366 Homo sapiens, guanine nucleotide bin... 72 1e-10
gb|BC010119.1|BC010119 Homo sapiens, guanine nucleotide bin... 72 1e-10
gb|BC019362.1|BC019362 Homo sapiens, guanine nucleotide bin... 72 1e-10
emb|AL357152.1|SCH18 Streptomyces coelicolor cosmid H18 72 1e-10
dbj|D38231.1|RICGPBSLP Rice mRNA for q group of receptor fo... 72 1e-10
gb|BC014788.1|BC014788 Homo sapiens, guanine nucleotide bin... 72 1e-10
emb|Z33879.1|SSGBETA S.scrofa mRNA encoding G-beta like pro... 72 1e-10
gb|BC000672.1|BC000672 Homo sapiens, guanine nucleotide bin... 72 1e-10
dbj|AK002493.1|AK002493 Mus musculus adult male kidney cDNA... 72 1e-10
ref|NM_008143.1| Mus musculus guanine nucleotide binding pr... 72 1e-10
emb|X75313.1|MMRNAGM M.musculus (C57BL/6) GB-like mRNA 72 1e-10
ref|XM_098427.1| Homo sapiens guanine nucleotide binding pr... 72 1e-10
gb|BC017287.1|BC017287 Homo sapiens, guanine nucleotide bin... 72 1e-10
gb|M24194.1|HUMMHBA123 Human MHC protein homologous to chic... 72 1e-10
dbj|D29802.1|MUSGPBSL Mouse mRNA for G protein beta subunit... 72 1e-10
gb|BC014256.1|BC014256 Homo sapiens, Similar to guanine nuc... 72 1e-10
ref|XM_057125.1| Homo sapiens similar to guanine nucleotide... 72 1e-10
ref|XM_034958.1| Homo sapiens similar to guanine nucleotide... 72 1e-10
ref|NM_006098.1| Homo sapiens guanine nucleotide binding pr... 72 1e-10
gb|M24193.1|CHKMHB123A Chicken MHC B complex protein (C12-3... 72 1e-10
ref|NM_130734.1| Rattus norvegicus guanine nucleotide bindi... 72 1e-10
gb|BC021993.1|BC021993 Homo sapiens, guanine nucleotide bin... 72 1e-10
gb|BC020322.1|BC020322 Mus musculus, clone IMAGE:4458340, mRNA 72 1e-10
emb|AJ132860.1|BTA132860 Bos taurus mRNA for receptor for a... 72 1e-10
gb|U03390.1|RNU03390 Rattus norvegicus Sprague Dawley prote... 72 1e-10
gb|BC000214.1|BC000214 Homo sapiens, guanine nucleotide bin... 72 1e-10
dbj|AK017772.1|AK017772 Mus musculus 8 days embryo whole bo... 72 1e-10
emb|Z33643.1|BNGNRPR B.napus (Naehan) bgb1 mRNA for guanine... 72 1e-10
emb|AJ131817.1|SCO131817 Streptomyces coelicolor wdpA gene 72 1e-10
dbj|AP003455.2|AP003455 Oryza sativa genomic DNA, chromosom... 72 1e-10
gb|AY061326.1| Drosophila melanogaster LD24373 full length ... 64 1e-10
dbj|AK009972.1|AK009972 Mus musculus adult male tongue cDNA... 72 1e-10
gb|BC023137.1| Mus musculus, RIKEN cDNA 2310058A11 gene, cl... 72 1e-10
gb|BC003199.1|BC003199 Mus musculus, RIKEN cDNA 2310058A11 ... 72 1e-10
emb|AJ289773.1|PSA289773 Pisum sativum mRNA for COP1 regula... 71 2e-10
emb|AJ289774.1|PSA289774 Pisum sativum mRNA for COP1 regula... 71 2e-10
dbj|AP003600.1|AP003600 Nostoc sp. PCC 7120 plasmid pCC7120... 71 2e-10
emb|Y09579.1|PSCOP1PRT P.sativum mRNA for Cop1 protein 71 2e-10
ref|NM_030732.1| Mus musculus IRA1 protein (IRA1), mRNA 71 2e-10
gb|AF268195.1|AF268195 Mus musculus strain BALB/c IRA1 mRNA... 71 2e-10
emb|Z72388.1|NPGPROTB N.plumbaginifolia mRNA for G protein ... 71 2e-10
emb|Y09514.1|NPY09514 N.plumbaginifolia mRNA for G protein ... 71 2e-10
gb|AF021797.1|AF021797 Pichia pastoris peroxisomal receptor... 71 2e-10
ref|NM_007062.1| Homo sapiens nuclear phosphoprotein simila... 70 3e-10
gb|L07758.1|HUM56KDAPR Human IEF SSP 9502 mRNA, complete cds 70 3e-10
ref|NM_116211.1| putative protein 70 3e-10
emb|AJ004807.1|NTAJ4807 Nicotiana tabacum xanthi arcA 3 gen... 70 3e-10
gb|U77381.1|ATU77381 Arabidopsis thaliana WD-40 repeat prot... 70 3e-10
dbj|AB022687.1|AB022687 Lycopersicon esculentum mRNA for Le... 70 4e-10
gb|AY063016.1| Arabidopsis thaliana putative guanine nucleo... 70 4e-10
gb|AE003549.2|AE003549 Drosophila melanogaster genomic scaf... 70 4e-10
gb|AC069551.4|AC069551 Genomic sequence for Arabidopsis tha... 70 4e-10
gb|AC010156.5| Drosophila melanogaster 3L BAC RP98-27H3 (Ro... 70 4e-10
ref|XM_096175.1| Homo sapiens nuclear receptor co-repressor... 70 4e-10
ref|NM_016194.1| Homo sapiens guanine nucleotide binding pr... 70 4e-10
emb|AL117471.1|HSM800984 Homo sapiens mRNA; cDNA DKFZp586O1... 70 4e-10
gb|AY035007.1| Arabidopsis thaliana putative guanine nucleo... 70 4e-10
emb|Y08678.1|MSGB1 M.sativa mRNA for G protein beta subunit... 70 4e-10
emb|X97800.1|HVRACK1 H.vulgaris mRNA for put. activated pro... 70 4e-10
gb|AF314544.1|AF314544 Homo sapiens nuclear receptor co-rep... 70 4e-10
gb|AF268193.1|AF268193 Homo sapiens IRA1 mRNA, complete cds... 70 4e-10
dbj|AB025245.1|AB025245 Xenopus laevis mRNA for coronin hom... 70 4e-10
gb|AE003590.2|AE003590 Drosophila melanogaster genomic scaf... 70 4e-10
ref|NM_080088.1| Drosophila melanogaster cannonball (can), ... 70 4e-10
gb|AF346730.1|AF346730 Drosophila melanogaster cannonball m... 70 4e-10
gb|L37885.2|YSPGNRP Schizosaccharomyces pombe guanine nucle... 70 4e-10
ref|NM_024665.1| Homo sapiens nuclear receptor co-repressor... 70 4e-10
dbj|AK022956.1|AK022956 Homo sapiens cDNA FLJ12894 fis, clo... 70 4e-10
gb|AC008318.7|AC008318 Drosophila melanogaster, chromosome ... 70 4e-10
gb|AC034107.5|T10F20 Sequence of BAC T10F20 from Arabidopsi... 70 4e-10
dbj|AK007246.1|AK007246 Mus musculus adult male testis cDNA... 70 4e-10
gb|BC001652.1|BC001652 Homo sapiens, nuclear phosphoprotein... 70 4e-10
ref|NM_101670.1| WD-40 repeat protein 70 4e-10
gb|AC005334.1|AC005334 Drosophila melanogaster DNA sequence... 70 4e-10
ref|NM_003310.1| Homo sapiens tumor suppressing subtransfer... 70 5e-10
gb|AF019952.1|AF019952 Homo sapiens tumor suppressing STF c... 70 5e-10
dbj|AB042102.1|AB042102 Oryza sativa SEC31 mRNA, complete cds 70 5e-10
gb|BC002485.1|BC002485 Homo sapiens, tumor suppressing subt... 70 5e-10
gb|AY061388.1| Drosophila melanogaster LD31217 full length ... 70 5e-10
gb|AF105259.1|AF105259 Xenopus laevis activated protein kin... 70 5e-10
gb|AE003813.2|AE003813 Drosophila melanogaster genomic scaf... 70 5e-10
dbj|AB020749.1|AB020749 Arabidopsis thaliana genomic DNA, c... 70 5e-10
dbj|AK026522.1|AK026522 Homo sapiens cDNA: FLJ22869 fis, cl... 70 5e-10
ref|NM_065348.1| guanine nucleotide binding protein 70 5e-10
gb|AC010578.5|AC010578 Drosophila melanogaster, chromosome ... 70 5e-10
gb|AF025331.1|AF025331 Tilapia nilotica receptor for activa... 70 5e-10
dbj|AP003590.1|AP003590 Nostoc sp. PCC 7120 DNA, complete g... 70 5e-10
ref|NG_000791.1| Drosophila melanogaster (Ercc1) on chromo... 70 5e-10
gb|AC012187.3|F13K23 Sequence of BAC F13K23 from Arabidopsi... 70 5e-10
ref|XM_010790.5| Homo sapiens tumor suppressing subtransfer... 70 5e-10
ref|NM_101162.1| flower pigmentation protein ATAN11 70 5e-10
ref|NM_112695.1| protein kinase C-receptor/G-protein, putative 70 5e-10
gb|AY050338.1| Arabidopsis thaliana AT3g18130/MRC8_11 mRNA,... 70 5e-10
gb|L28125.2|FLABTLP Podospora anserina beta transducin-like... 69 6e-10
ref|XM_082025.1| CG1523, mRNA 69 6e-10
emb|AJ271374.1|TVA271374 Trichomonas vaginalis cor1 gene fo... 69 6e-10
gb|AY051986.1| Drosophila melanogaster LD45447 full length ... 69 6e-10
ref|NM_104802.1| hypothetical protein 69 6e-10
ref|NM_004814.1| Homo sapiens U5 snRNP-specific 40 kDa prot... 69 8e-10
gb|AF090988.1|AF090988 Homo sapiens U5 snRNP-specific 40 kD... 69 8e-10
gb|AF261992.1|AF261992 Oryza sativa subsp. indica COP1 mRNA... 69 8e-10
ref|XM_079245.1| CG4705, mRNA 69 8e-10
dbj|AB040053.1|AB040053 Oryza sativa subsp. japonica rCOP1 ... 69 8e-10
dbj|AB070895.1|AB070895 Mus musculus mRNA for clipin E/coro... 69 1e-09
dbj|AK016201.1|AK016201 Mus musculus adult male testis cDNA... 69 1e-09
dbj|AK002371.1|AK002371 Mus musculus adult male kidney cDNA... 69 1e-09
ref|XM_010869.5| Homo sapiens similar to WD40 protein Ciao1... 68 1e-09
ref|NM_103759.1| guanine nucleotide-binding protein, putative 68 1e-09
gb|AF140359.1|AF140359 Rattus norvegicus coronin relative p... 68 1e-09
ref|XM_001618.4| Homo sapiens U5 snRNP-specific 40 kDa prot... 68 1e-09
ref|NM_019069.1| Homo sapiens WD repeat domain 5B (WDR5B), ... 68 1e-09
dbj|AK002149.1|AK002149 Homo sapiens cDNA FLJ11287 fis, clo... 68 1e-09
gb|BC001395.1|BC001395 Homo sapiens, WD40 protein Ciao1, cl... 68 1e-09
emb|AL590444.1|CNS07EGB chromosome IV of strain GB-M1 of En... 68 1e-09
gb|BC001494.1|BC001494 Homo sapiens, clone MGC:1910 IMAGE:3... 68 1e-09
ref|NM_004804.1| Homo sapiens WD40 protein Ciao1 (CIAO1), mRNA 68 1e-09
gb|U63810.1|HSU63810 Homo sapiens WD40 protein Ciao 1 mRNA,... 68 1e-09
gb|AF063022.1|AF063022 Crithidia fasciculata CACK protein (... 68 1e-09
gb|U44850.1|GMU44850 Glycine max G beta-like protein mRNA, ... 68 1e-09
gb|AF100286.1|AF100286 Trypanosoma congolense strain IL1180... 68 1e-09
gb|AC073555.9|AC073555 Arabidopsis thaliana chromosome 1 BA... 68 1e-09
gb|AC074308.1|AC074308 Arabidopsis thaliana chromosome 1 BA... 68 1e-09
gb|AY059723.1| Arabidopsis thaliana putative guanine nucleo... 68 1e-09
ref|XM_051882.1| Homo sapiens WD40 protein Ciao1 (CIAO1), mRNA 68 1e-09
dbj|AK010576.1|AK010576 Mus musculus ES cells cDNA, RIKEN f... 68 2e-09
ref|XM_048046.1| Homo sapiens katanin p80 (WD40-containing)... 68 2e-09
dbj|D63999.1|SYCSLRA Synechocystis sp. PCC 6803 DNA, comple... 68 2e-09
emb|AL078635.1|CZA382 Amycolatopsis orientalis cosmid pCZA382 68 2e-09
ref|NM_009684.1| Mus musculus apoptotic protease activating... 68 2e-09
gb|AF064071.1|AF064071 Mus musculus apoptotic protease acti... 68 2e-09
dbj|AK010364.1|AK010364 Mus musculus ES cells cDNA, RIKEN f... 68 2e-09
emb|AJ427222.1|MMU427222 Mus musculus mRNA for cockayne syn... 68 2e-09
ref|NM_124660.1| Notchless protein homolog 68 2e-09
gb|U94746.1|ATU94746 Arabidopsis thaliana WD repeat protein... 68 2e-09
gb|M96642.1|PARRSP126A Paramecium tetraurelia P126 repetiti... 68 2e-09
ref|NM_015426.1| Homo sapiens DKFZP434C245 protein (DKFZP43... 68 2e-09
gb|BC007417.1|BC007417 Homo sapiens, Similar to RIKEN cDNA ... 68 2e-09
gb|BC001353.1|BC001353 Homo sapiens, katanin p80 (WD40-cont... 68 2e-09
gb|BC012827.1|BC012827 Homo sapiens, CDC20 (cell division c... 67 2e-09
gb|BC001088.1|BC001088 Homo sapiens, CDC20 (cell division c... 67 2e-09
gb|BC015998.1|BC015998 Homo sapiens, CDC20 (cell division c... 67 2e-09
gb|BC006272.1|BC006272 Homo sapiens, CDC20 (cell division c... 67 2e-09
dbj|AK014865.1|AK014865 Mus musculus adult male testis cDNA... 67 2e-09
ref|XM_046373.3| Homo sapiens CDC20 cell division cycle 20 ... 67 2e-09
ref|NM_001255.1| Homo sapiens CDC20 cell division cycle 20 ... 67 2e-09
gb|U05340.1|HSU05340 Human p55CDC mRNA, complete cds 67 2e-09
gb|BC010044.1|BC010044 Homo sapiens, CDC20 (cell division c... 67 2e-09
gb|BC000624.1|BC000624 Homo sapiens, CDC20 (cell division c... 67 2e-09
gb|BC009426.1|BC009426 Homo sapiens, CDC20 (cell division c... 67 2e-09
gb|BC009425.1|BC009425 Homo sapiens, CDC20 (cell division c... 67 2e-09
gb|AF099644.1|AF099644 Homo sapiens cell cycle protein CDC2... 67 2e-09
dbj|AK016618.1|AK016618 Mus musculus adult male testis cDNA... 67 2e-09
dbj|AB025246.1|AB025246 Xenopus laevis mRNA for coronin hom... 67 2e-09
gb|BC012803.1|BC012803 Homo sapiens, CDC20 (cell division c... 67 2e-09
gb|BC013303.1|BC013303 Homo sapiens, CDC20 (cell division c... 67 2e-09
ref|NM_129713.1| putative small nuclear ribonucleoprotein P... 67 3e-09
ref|NM_025296.1| Mus musculus WD40 protein Ciao1 (Ciao1-pen... 67 3e-09
dbj|AK002314.1|AK002314 Mus musculus adult male kidney cDNA... 67 3e-09
ref|NM_023979.1| Rattus norvegicus apoptotic protease activ... 67 3e-09
gb|AF320222.1|AF320222 Rattus norvegicus APAF1 (Apaf1) mRNA... 67 3e-09
ref|NM_130197.1| putative photomorphogenesis repressor protein 67 3e-09
gb|AF052433.1|AF052433 Strongylocentrotus purpuratus katani... 67 3e-09
gb|AF135455.1|AF135455 Arabidopsis thaliana phytochrome A s... 67 3e-09
gb|BC016103.1|BC016103 Mus musculus, Similar to hypothetica... 67 4e-09
dbj|AK000552.1|AK000552 Homo sapiens cDNA FLJ20545 fis, clo... 67 4e-09
gb|AF368031.1|AF368031 Heliothis virescens receptor for act... 67 4e-09
ref|NM_080848.1| Mus musculus Bmp2-induced gene (Big-pendin... 67 4e-09
gb|AF416510.1|AF416510 Mus musculus WD repeat protein BIG-3... 67 4e-09
gb|BC001635.1|BC001635 Homo sapiens, Similar to hypothetica... 67 4e-09
ref|XM_035403.3| Homo sapiens coronin, actin binding protei... 67 4e-09
dbj|AK025810.1|AK025810 Homo sapiens cDNA: FLJ22157 fis, cl... 67 4e-09
gb|BC004089.1|BC004089 Mus musculus, WD40 protein Ciao1, cl... 67 4e-09
ref|NM_052821.1| Homo sapiens WD repeat domain 5 (WDR5), tr... 67 4e-09
ref|NM_017588.1| Homo sapiens WD repeat domain 5 (WDR5), tr... 67 4e-09
emb|AJ011376.1|HSA011376 Homo sapiens mRNA for hypothetical... 67 4e-09
ref|NM_000082.1| Homo sapiens Cockayne syndrome 1 (classica... 67 4e-09
gb|U28413.1|HSU28413 Human Cockayne syndrome complementatio... 67 4e-09
dbj|AB023142.1|AB023142 Homo sapiens mRNA for KIAA0925 prot... 67 4e-09
gb|AF277458.1|AF277458 Arabidopsis thaliana LEUNIG (LEUNIG)... 66 5e-09
ref|NM_061344.1| Caenorhabditis elegans 66 5e-09
emb|X59720.2|SCCHRIII S.cerevisiae chromosome III complete ... 66 5e-09
ref|NM_119407.1| putative protein 66 5e-09
gb|AF218388.1|AF218388 Rattus norvegicus apoptotic protease... 66 5e-09
ref|NM_011779.1| Mus musculus coronin, actin binding protei... 66 7e-09
gb|AF143957.1|AF143957 Mus musculus coronin-3 mRNA, complet... 66 7e-09
dbj|AK056931.1|AK056931 Homo sapiens cDNA FLJ32369 fis, clo... 66 7e-09
dbj|AB070894.1|AB070894 Mus musculus mRNA for clipin E/coro... 66 7e-09
gb|AC008260.5|AC008260 Drosophila melanogaster, chromosome ... 66 7e-09
dbj|AK011064.1|AK011064 Mus musculus 13 days embryo liver c... 66 7e-09
ref|NM_057609.1| Drosophila melanogaster TBP-associated fac... 66 7e-09
dbj|AB070896.1|AB070896 Mus musculus mRNA for clipin E/coro... 66 7e-09
ref|NG_000355.1| Drosophila melanogaster TBP-associated fac... 66 7e-09
gb|AY051960.1| Drosophila melanogaster LD42828 full length ... 66 7e-09
gb|AC005437.1|AC005437 Drosophila melanogaster DNA sequence... 66 7e-09
gb|AE003828.2|AE003828 Drosophila melanogaster genomic scaf... 66 7e-09
gb|U06460.1|DMU06460 Drosophila melanogaster transcription ... 66 7e-09
gb|AF052575.1|AF052575 Spisula solidissima Cdc20 mRNA, comp... 66 7e-09
gb|AF083383.1|AF083383 Homo sapiens 38kDa splicing factor m... 65 9e-09
gb|BC019444.1|BC019444 Mus musculus, coronin, actin binding... 65 9e-09
ref|NM_100988.1| hypothetical protein 65 9e-09
dbj|AK009247.1|AK009247 Mus musculus adult male tongue cDNA... 65 9e-09
gb|U27537.1|DDU27537 Dictyostelium discoideum G beta like p... 65 9e-09
ref|NM_126132.1| putative protein 65 9e-09
gb|AY057698.1| Arabidopsis thaliana AT5g67320/K8K14_4 mRNA,... 65 9e-09
emb|Z73603.1|SCYPL247C S.cerevisiae chromosome XVI reading ... 65 1e-08
gb|AF439825.1|AF439825 Arabidopsis thaliana AT4g02730/T5J8_... 65 1e-08
ref|NM_116507.1| putative WD-repeat protein 65 1e-08
dbj|AB010098.1|AB010098 Homo sapiens mRNA for ClipinC, comp... 65 1e-08
emb|Z67751.1|SC38KCXVI S.cerevisiae DNA (chromosome XVI; 38... 65 1e-08
dbj|AB005589.1|AB005589 Schizosaccharomyces pombe mRNA for ... 65 2e-08
ref|NM_106648.1| putative coatomer protein complex, subunit... 65 2e-08
gb|U20939.1|YSCL9576 Saccharomyces cerevisiae chromosome XI... 65 2e-08
emb|Y15054.1|RNY15054 Rattus norvegicus mRNA for 70 kDa tum... 65 2e-08
ref|NM_030581.1| Homo sapiens hypothetical protein FLJ12270... 65 2e-08
gb|BC004519.1|BC004519 Homo sapiens, clone MGC:11230 IMAGE:... 65 2e-08
emb|AL132675.1|SPAC144 S.pombe chromosome I cosmid c144 65 2e-08
dbj|AK012242.1|AK012242 Mus musculus 11 days embryo whole b... 65 2e-08
ref|NM_014325.1| Homo sapiens coronin, actin binding protei... 64 2e-08
dbj|AB030656.1|AB030656 Homo sapiens mRNA for hCRNN4, compl... 64 2e-08
dbj|AK000860.1|AK000860 Homo sapiens cDNA FLJ20853 fis, clo... 64 2e-08
ref|NM_104114.1| coatomer complex subunit, putative 64 2e-08
gb|AY074265.1| Arabidopsis thaliana unknown protein (At1g27... 64 2e-08
dbj|AK023205.1|AK023205 Homo sapiens cDNA FLJ13143 fis, clo... 64 2e-08
gb|AY040023.1| Arabidopsis thaliana unknown protein (F8L10.... 64 2e-08
ref|XM_083885.1| Homo sapiens coronin, actin binding protei... 64 2e-08
gb|AY057556.1| Arabidopsis thaliana At1g27840/F28L5_15 mRNA... 64 2e-08
emb|AL590442.1|CNS07EG9 chromosome II of strain GB-M1 of En... 64 2e-08
gb|BC002342.1|BC002342 Homo sapiens, coronin, actin-binding... 64 2e-08
emb|AJ298991.1|FSY298991 Fagus sylvatica partial mRNA for G... 64 2e-08
emb|AL162070.1|HSM802601 Homo sapiens mRNA; cDNA DKFZp762H1... 64 2e-08
gb|U05341.1|RRU05341 Rattus norvegicus p55CDC mRNA, complet... 64 2e-08
ref|NM_020441.1| Homo sapiens hypothetical protein DKFZp762... 64 2e-08
gb|BC006449.1|BC006449 Homo sapiens, Similar to coronin, ac... 64 2e-08
gb|AF220203.1|AF220203 Malus domestica Ttg1-like protein mR... 64 2e-08
emb|X83704.1|SCDNAPEB1 S.cerevisiae PEB1 gene 64 2e-08
ref|NM_102549.1| hypothetical protein 64 2e-08
emb|X81424.1|SCPAS7 S.cerevisiae PAS7 gene 64 2e-08
ref|NM_104188.1| phytochrome A supressor spa1, putative 64 2e-08
dbj|D89247.1|D89247 Schizosaccharomyces pombe mRNA, partial... 64 3e-08
gb|AF034793.1| Leishmania donovani activated protein kinase... 64 3e-08
gb|U49695.1|LIU49695 Leishmania infantum activated protein ... 64 3e-08
gb|AF363974.1|AF363974 Leishmania donovani strain MHOM/SD/0... 64 3e-08
gb|U27569.1|LCU27569 Leishmania chagasi activated protein k... 64 3e-08
emb|AL133156.1|SPAC227 S.pombe chromosome I cosmid c227 64 3e-08
emb|Z36067.1|SCYBR198C S.cerevisiae chromosome II reading f... 64 3e-08
ref|NM_058924.1| beta transducin 64 3e-08
gb|AC084614.1|CBRG44F10 Caenorhabditis briggsae cosmid G44F... 47 3e-08
gb|AC104609.9| Drosophila melanogaster X BAC RP98-39F18 (Ro... 64 3e-08
ref|NM_019222.1| Rattus norvegicus coronin, actin binding p... 64 3e-08
gb|AE003443.1|AE003443 Drosophila melanogaster genomic scaf... 64 3e-08
emb|AJ006064.1|RNO6064 Rattus norvegicus mRNA for coronin-l... 64 3e-08
gb|AF124742.1|AF124742 Euprymna scolopes guanine nucleotide... 64 3e-08
emb|Z48179.1|SC9302X S.cerevisiae chromosome IV cosmid 9302 64 3e-08
gb|AC007892.4|AC007892 Drosophila melanogaster, chromosome ... 64 3e-08
ref|NM_080245.1| Drosophila melanogaster will die slowly (w... 64 3e-08
ref|XM_081893.1| BcDNA:LD21720, mRNA 64 3e-08
gb|AE003771.2|AE003771 Drosophila melanogaster genomic scaf... 64 3e-08
gb|AF132181.1|AF132181 Drosophila melanogaster clone LD2172... 64 3e-08
emb|AL031907.1|SPCC18 S.pombe chromosome III cosmid c18 64 3e-08
gb|AF125255.1|AF125255 Leishmania panamensis activated prot... 64 3e-08
gb|AF125254.1|AF125254 Leishmania panamensis activated prot... 64 3e-08
gb|AE003767.1|AE003767 Drosophila melanogaster genomic scaf... 63 5e-08
gb|AF357839.1|AF357839 Leishmania donovani LACK protective ... 63 5e-08
gb|AC004044.1|AC004044 Arabidopsis thaliana BAC T5J8 from c... 63 5e-08
ref|NM_011778.1| Mus musculus coronin, actin binding protei... 63 5e-08
gb|AF143956.1|AF143956 Mus musculus coronin-2 mRNA, complet... 63 5e-08
dbj|AK004277.1|AK004277 Mus musculus 18 days embryo whole b... 63 5e-08
gb|AY045860.1| Arabidopsis thaliana putative GTP binding pr... 63 5e-08
emb|AJ427856.1|DDI427856 Dictyostelium discoideum ORF encod... 63 5e-08
gb|AC006170.11|AC006170 Drosophila melanogaster, chromosome... 63 5e-08
gb|AF034578.1|AF034578 Xenopus laevis fizzy1 mRNA, complete... 63 5e-08
gb|U12232.1|ATU12232 Arabidopsis thaliana Columbia GTP bind... 63 5e-08
ref|NM_119611.1| GTP binding protein beta subunit 63 5e-08
emb|AL161495.2|ATCHRIV7 Arabidopsis thaliana DNA chromosome... 63 5e-08
gb|AC002330.1|AC002330 Arabidopsis thaliana BAC T10P11 from... 63 5e-08
dbj|D90915.1|D90915 Synechocystis sp. PCC 6803 DNA, complet... 63 5e-08
gb|AF277893.1|AF277893 Mus musculus G-protein beta-4 subuni... 63 5e-08
ref|NM_013531.1| Mus musculus guanine nucleotide binding pr... 63 5e-08
gb|S86124.1|S86124 GTP-binding protein beta-subunit 4 [mice... 63 5e-08
gb|M87286.1|MUSGTPBETA Mus musculus GTP-binding protein bet... 63 5e-08
gb|M63658.1|MUSGB4A M.musculus G protein beta-subunit mRNA,... 63 5e-08
gb|AE003630.1|AE003630 Drosophila melanogaster genomic scaf... 45 6e-08
gb|AC007147.8|AC007147 Drosophila melanogaster, chromosome ... 45 6e-08
ref|NM_112468.1| putative coatomer complex subunit 63 6e-08
gb|U27568.1|LMU27568 Leishmania major activated protein kin... 63 6e-08
gb|AF332222.1|AF332222 Homo sapiens transducin beta-like 1 ... 63 6e-08
>gb|AF279275.1|AF279275 Gallus gallus Rbap46 polypeptide mRNA, complete cds
Length = 1813
Score = 884 bits (2284), Expect = 0.0
Identities = 424/424 (100%), Positives = 424/424 (100%)
Frame = +3
Query: 1 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY 60
MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY
Sbjct: 114 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY 293
Query: 61 ALHWLVLGTHTSDEQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKIN 120
ALHWLVLGTHTSDEQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKIN
Sbjct: 294 ALHWLVLGTHTSDEQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKIN 473
Query: 121 HEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 180
HEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG
Sbjct: 474 HEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 653
Query: 181 LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 240
LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL
Sbjct: 654 LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 833
Query: 241 FGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 300
FGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD
Sbjct: 834 FGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 1013
Query: 301 LRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG 360
LRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG
Sbjct: 1014LRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG 1193
Query: 361 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAELE 420
PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAELE
Sbjct: 1194PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAELE 1373
Query: 421 GQGT 424
GQGT
Sbjct: 1374GQGT 1385
>ref|NM_009031.1| Mus musculus retinoblastoma binding protein 7 (Rbbp7), mRNA
Length = 1748
Score = 839 bits (2168), Expect = 0.0
Identities = 399/425 (93%), Positives = 414/425 (96%), Gaps = 1/425 (0%)
Frame = +2
Query: 1 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY 60
MASKE+ EDTVEERVI+EEYKIWKKNTPFLYDLVMTHAL+WPSLTVQWLP+V++PEGKDY
Sbjct: 260 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 439
Query: 61 ALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKI 119
ALHWLVLGTHTSDEQNHLVVARV IPNDD QFD S DS+KGEFGGFGSVTGKIE EIKI
Sbjct: 440 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 619
Query: 120 NHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY 179
NHEGEVNRARYMPQNP+IIATKTPS+DVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEGY
Sbjct: 620 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 799
Query: 180 GLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 239
GLSWNSNL GHLLSASDDHTVCLWDI+AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
Sbjct: 800 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 979
Query: 240 LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 299
LFGSVADDQKLMIWDTRSNTTSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 980 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 1159
Query: 300 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 359
DLRNLKLKLH+FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
Sbjct: 1160DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 1339
Query: 360 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAEL 419
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE D+ A+EL
Sbjct: 1340GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL 1519
Query: 420 EGQGT 424
EGQG+
Sbjct: 1520EGQGS 1534
>gb|U35142.1|MMU35142 Mus musculus retinoblastoma-binding protein (mRbAp46) mRNA,
complete cds
Length = 1748
Score = 839 bits (2168), Expect = 0.0
Identities = 399/425 (93%), Positives = 414/425 (96%), Gaps = 1/425 (0%)
Frame = +2
Query: 1 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY 60
MASKE+ EDTVEERVI+EEYKIWKKNTPFLYDLVMTHAL+WPSLTVQWLP+V++PEGKDY
Sbjct: 260 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 439
Query: 61 ALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKI 119
ALHWLVLGTHTSDEQNHLVVARV IPNDD QFD S DS+KGEFGGFGSVTGKIE EIKI
Sbjct: 440 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 619
Query: 120 NHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY 179
NHEGEVNRARYMPQNP+IIATKTPS+DVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEGY
Sbjct: 620 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 799
Query: 180 GLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 239
GLSWNSNL GHLLSASDDHTVCLWDI+AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
Sbjct: 800 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 979
Query: 240 LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 299
LFGSVADDQKLMIWDTRSNTTSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 980 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 1159
Query: 300 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 359
DLRNLKLKLH+FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
Sbjct: 1160DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 1339
Query: 360 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAEL 419
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE D+ A+EL
Sbjct: 1340GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL 1519
Query: 420 EGQGT 424
EGQG+
Sbjct: 1520EGQGS 1534
>gb|BC003785.1|BC003785 Mus musculus, retinoblastoma binding protein 7, clone MGC:6013
IMAGE:3600013, mRNA, complete cds
Length = 1918
Score = 839 bits (2168), Expect = 0.0
Identities = 399/425 (93%), Positives = 414/425 (96%), Gaps = 1/425 (0%)
Frame = +1
Query: 1 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY 60
MASKE+ EDTVEERVI+EEYKIWKKNTPFLYDLVMTHAL+WPSLTVQWLP+V++PEGKDY
Sbjct: 250 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 429
Query: 61 ALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKI 119
ALHWLVLGTHTSDEQNHLVVARV IPNDD QFD S DS+KGEFGGFGSVTGKIE EIKI
Sbjct: 430 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 609
Query: 120 NHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY 179
NHEGEVNRARYMPQNP+IIATKTPS+DVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEGY
Sbjct: 610 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 789
Query: 180 GLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 239
GLSWNSNL GHLLSASDDHTVCLWDI+AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
Sbjct: 790 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 969
Query: 240 LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 299
LFGSVADDQKLMIWDTRSNTTSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 970 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 1149
Query: 300 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 359
DLRNLKLKLH+FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
Sbjct: 1150DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 1329
Query: 360 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAEL 419
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE D+ A+EL
Sbjct: 1330GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL 1509
Query: 420 EGQGT 424
EGQG+
Sbjct: 1510EGQGS 1524
>ref|NM_002893.2| Homo sapiens retinoblastoma binding protein 7 (RBBP7), mRNA
Length = 1946
Score = 838 bits (2164), Expect = 0.0
Identities = 398/425 (93%), Positives = 413/425 (96%), Gaps = 1/425 (0%)
Frame = +3
Query: 1 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY 60
MASKE+ EDTVEERVI+EEYKIWKKNTPFLYDLVMTHAL+WPSLTVQWLP+V++PEGKDY
Sbjct: 288 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 467
Query: 61 ALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKI 119
ALHWLVLGTHTSDEQNHLVVARV IPNDD QFD S DS+KGEFGGFGSVTGKIE EIKI
Sbjct: 468 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 647
Query: 120 NHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY 179
NHEGEVNRARYMPQNP+IIATKTPS+DVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEGY
Sbjct: 648 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 827
Query: 180 GLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 239
GLSWNSNL GHLLSASDDHTVCLWDI+AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
Sbjct: 828 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 1007
Query: 240 LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 299
LFGSVADDQKLMIWDTRSNTTSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 1008LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 1187
Query: 300 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 359
DLRNLKLKLH+FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
Sbjct: 1188DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 1367
Query: 360 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAEL 419
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE D+ +EL
Sbjct: 1368GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 1547
Query: 420 EGQGT 424
EGQG+
Sbjct: 1548EGQGS 1562
>emb|X72841.1|HSIEF7442 H.sapiens IEF 7442 mRNA
Length = 1943
Score = 838 bits (2164), Expect = 0.0
Identities = 398/425 (93%), Positives = 413/425 (96%), Gaps = 1/425 (0%)
Frame = +1
Query: 1 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY 60
MASKE+ EDTVEERVI+EEYKIWKKNTPFLYDLVMTHAL+WPSLTVQWLP+V++PEGKDY
Sbjct: 286 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 465
Query: 61 ALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKI 119
ALHWLVLGTHTSDEQNHLVVARV IPNDD QFD S DS+KGEFGGFGSVTGKIE EIKI
Sbjct: 466 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 645
Query: 120 NHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY 179
NHEGEVNRARYMPQNP+IIATKTPS+DVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEGY
Sbjct: 646 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 825
Query: 180 GLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 239
GLSWNSNL GHLLSASDDHTVCLWDI+AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
Sbjct: 826 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 1005
Query: 240 LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 299
LFGSVADDQKLMIWDTRSNTTSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 1006LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 1185
Query: 300 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 359
DLRNLKLKLH+FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
Sbjct: 1186DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 1365
Query: 360 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAEL 419
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE D+ +EL
Sbjct: 1366GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 1545
Query: 420 EGQGT 424
EGQG+
Sbjct: 1546EGQGS 1560
>gb|U35143.1|HSU35143 Human retinoblastoma-binding protein (RbAp46) mRNA, complete cds
Length = 1929
Score = 838 bits (2164), Expect = 0.0
Identities = 398/425 (93%), Positives = 413/425 (96%), Gaps = 1/425 (0%)
Frame = +1
Query: 1 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY 60
MASKE+ EDTVEERVI+EEYKIWKKNTPFLYDLVMTHAL+WPSLTVQWLP+V++PEGKDY
Sbjct: 262 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 441
Query: 61 ALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKI 119
ALHWLVLGTHTSDEQNHLVVARV IPNDD QFD S DS+KGEFGGFGSVTGKIE EIKI
Sbjct: 442 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 621
Query: 120 NHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY 179
NHEGEVNRARYMPQNP+IIATKTPS+DVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEGY
Sbjct: 622 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 801
Query: 180 GLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 239
GLSWNSNL GHLLSASDDHTVCLWDI+AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
Sbjct: 802 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 981
Query: 240 LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 299
LFGSVADDQKLMIWDTRSNTTSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 982 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 1161
Query: 300 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 359
DLRNLKLKLH+FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
Sbjct: 1162DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 1341
Query: 360 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAEL 419
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE D+ +EL
Sbjct: 1342GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 1521
Query: 420 EGQGT 424
EGQG+
Sbjct: 1522EGQGS 1536
>ref|NM_031816.1| Rattus norvegicus retinoblastoma binding protein 7 (Rbbp7), mRNA
Length = 1947
Score = 838 bits (2164), Expect = 0.0
Identities = 398/425 (93%), Positives = 413/425 (96%), Gaps = 1/425 (0%)
Frame = +1
Query: 1 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY 60
MASKE+ EDTVEERVI+EEYKIWKKNTPFLYDLVMTHAL+WPSLTVQWLP+V++PEGKDY
Sbjct: 274 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 453
Query: 61 ALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKI 119
ALHWLVLGTHTSDEQNHLVVARV IPNDD QFD S DS+KGEFGGFGSVTGKIE EIKI
Sbjct: 454 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 633
Query: 120 NHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY 179
NHEGEVNRARYMPQNP+IIATKTPS+DVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEGY
Sbjct: 634 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 813
Query: 180 GLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 239
GLSWNSNL GHLLSASDDHTVCLWDI+AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
Sbjct: 814 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 993
Query: 240 LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 299
LFGSVADDQKLMIWDTRSNTTSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 994 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 1173
Query: 300 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 359
DLRNLKLKLH+FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
Sbjct: 1174DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 1353
Query: 360 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAEL 419
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE D+ +EL
Sbjct: 1354GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 1533
Query: 420 EGQGT 424
EGQG+
Sbjct: 1534EGQGS 1548
>gb|AF090306.1|AF090306 Rattus norvegicus retinoblastoma binding protein mRNA, complete cds
Length = 1947
Score = 838 bits (2164), Expect = 0.0
Identities = 398/425 (93%), Positives = 413/425 (96%), Gaps = 1/425 (0%)
Frame = +1
Query: 1 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY 60
MASKE+ EDTVEERVI+EEYKIWKKNTPFLYDLVMTHAL+WPSLTVQWLP+V++PEGKDY
Sbjct: 274 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 453
Query: 61 ALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKI 119
ALHWLVLGTHTSDEQNHLVVARV IPNDD QFD S DS+KGEFGGFGSVTGKIE EIKI
Sbjct: 454 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 633
Query: 120 NHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY 179
NHEGEVNRARYMPQNP+IIATKTPS+DVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEGY
Sbjct: 634 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 813
Query: 180 GLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 239
GLSWNSNL GHLLSASDDHTVCLWDI+AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
Sbjct: 814 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 993
Query: 240 LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 299
LFGSVADDQKLMIWDTRSNTTSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 994 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 1173
Query: 300 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 359
DLRNLKLKLH+FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
Sbjct: 1174DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 1353
Query: 360 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAEL 419
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE D+ +EL
Sbjct: 1354GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 1533
Query: 420 EGQGT 424
EGQG+
Sbjct: 1534EGQGS 1548
>ref|XM_010272.2| Homo sapiens retinoblastoma binding protein 7 (RBBP7), mRNA
Length = 1642
Score = 560 bits (1443), Expect(2) = 0.0
Identities = 266/284 (93%), Positives = 276/284 (96%), Gaps = 1/284 (0%)
Frame = +3
Query: 8 EDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVL 67
EDTVEERVI+EEYKIWKKNTPFLYDLVMTHAL+WPSLTVQWLP+V++PEGKDYALHWLVL
Sbjct: 6 EDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVL 185
Query: 68 GTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVN 126
GTHTSDEQNHLVVARV IPNDD QFD S DS+KGEFGGFGSVTGKIE EIKINHEGEVN
Sbjct: 186 GTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVN 365
Query: 127 RARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSN 186
RARYMPQNP+IIATKTPS+DVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEGYGLSWNSN
Sbjct: 366 RARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSN 545
Query: 187 LKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVAD 246
L GHLLSASDDHTVCLWDI+AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVAD
Sbjct: 546 LSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVAD 725
Query: 247 DQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
DQKLMIWDTRSNTTSKPSH VDAHTAEVNCLSFNPYSEFILATG
Sbjct: 726 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 857
Score = 273 bits (697), Expect(2) = 0.0
Identities = 127/134 (94%), Positives = 131/134 (96%)
Frame = +2
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 350
SADKTVALWDLRNLKLKLH+FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE
Sbjct: 857 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 1036
Query: 351 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 410
EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE
Sbjct: 1037EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 1216
Query: 411 EPDIAAAELEGQGT 424
E D+ +ELEGQG+
Sbjct: 1217ESDVTTSELEGQGS 1258
Score = 47.4 bits (111), Expect = 0.003
Identities = 34/145 (23%), Positives = 60/145 (40%), Gaps = 9/145 (6%)
Frame = +3
Query: 270 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 320
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 348 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 527
Query: 321 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 380
+ W+ + L S+ D + +WD++ +E DA+ I GH+A + D +W
Sbjct: 528 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 686
Query: 381 NPNEPWVICSVSEDNIMQIWQMAEN 405
+ + SV++D + IW N
Sbjct: 687 HLLHESLFGSVADDQKLMIWDTRSN 761
Score = 46.6 bits (109), Expect = 0.004
Identities = 24/114 (21%), Positives = 54/114 (47%), Gaps = 13/114 (11%)
Frame = +2
Query: 247 DQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL-- 304
D+ + +WD R+ H+ ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 863 DKTVALWDLRN--LKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 1036
Query: 305 KLKLHSFESHKDEIFQVH-----------WSPHNETILASSGTDRRLNVWDLSK 347
+ E E+ +H W+P+ ++ S D + +W +++
Sbjct: 1037EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 1198
Score = 43.5 bits (101), Expect = 0.037
Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 11/118 (9%)
Frame = +2
Query: 195 SDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWD 254
S D TV LWD+ + F H + V W +E++ S D++L +WD
Sbjct: 857 SADKTVALWDLR------NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 1018
Query: 255 TRSNTTSKPSHSVD-----------AHTAEVNCLSFNPYSEFILATGSADKTVALWDL 301
+ + + HTA+++ S+NP +++ + S D + +W +
Sbjct: 1019LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 1192
Score = 41.6 bits (96), Expect = 0.14
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Frame = +2
Query: 174 HQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKA-------IFTGHSA 226
H+ E + + W+ + + L S+ D + +WD+S +E DA+ I GH+A
Sbjct: 926 HKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTA 1105
Query: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSN 258
+ D +W+ + SV++D + IW N
Sbjct: 1106 KISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 1201
>ref|NM_005610.1| Homo sapiens retinoblastoma binding protein 4 (RBBP4), mRNA
Length = 2314
Score = 801 bits (2068), Expect = 0.0
Identities = 382/426 (89%), Positives = 402/426 (93%), Gaps = 2/426 (0%)
Frame = +1
Query: 1 MASKEV-LEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 59
MA KE +D VEERVI+EEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV+RPEGKD
Sbjct: 85 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 264
Query: 60 YALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIK 118
+++H LVLGTHTSDEQNHLV+A VQ+PNDD QFD S YDSEKGEFGGFGSV+GKIE EIK
Sbjct: 265 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 444
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
INHEGEVNRARYMPQNP IIATKTPS+DVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 445 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 624
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
YGLSWN NL GHLLSASDDHT+CLWDISA PKEGK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 625 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 804
Query: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 298
SLFGSVADDQKLMIWDTRSN TSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 805 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 984
Query: 299 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 358
WDLRNLKLKLHSFESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 985 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1164
Query: 359 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAE 418
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+P+ + +
Sbjct: 1165DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPE-GSVD 1341
Query: 419 LEGQGT 424
EGQG+
Sbjct: 1342PEGQGS 1359
>emb|X74262.1|HSRBAP48 H.sapiens RbAp48 mRNA encoding retinoblastoma binding protein
Length = 2314
Score = 801 bits (2068), Expect = 0.0
Identities = 382/426 (89%), Positives = 402/426 (93%), Gaps = 2/426 (0%)
Frame = +1
Query: 1 MASKEV-LEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 59
MA KE +D VEERVI+EEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV+RPEGKD
Sbjct: 85 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 264
Query: 60 YALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIK 118
+++H LVLGTHTSDEQNHLV+A VQ+PNDD QFD S YDSEKGEFGGFGSV+GKIE EIK
Sbjct: 265 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 444
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
INHEGEVNRARYMPQNP IIATKTPS+DVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 445 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 624
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
YGLSWN NL GHLLSASDDHT+CLWDISA PKEGK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 625 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 804
Query: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 298
SLFGSVADDQKLMIWDTRSN TSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 805 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 984
Query: 299 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 358
WDLRNLKLKLHSFESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 985 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1164
Query: 359 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAE 418
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+P+ + +
Sbjct: 1165DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPE-GSVD 1341
Query: 419 LEGQGT 424
EGQG+
Sbjct: 1342PEGQGS 1359
>ref|XM_018112.5| Homo sapiens retinoblastoma binding protein 4 (RBBP4), mRNA
Length = 2361
Score = 801 bits (2068), Expect = 0.0
Identities = 382/426 (89%), Positives = 402/426 (93%), Gaps = 2/426 (0%)
Frame = +2
Query: 1 MASKEV-LEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 59
MA KE +D VEERVI+EEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV+RPEGKD
Sbjct: 137 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 316
Query: 60 YALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIK 118
+++H LVLGTHTSDEQNHLV+A VQ+PNDD QFD S YDSEKGEFGGFGSV+GKIE EIK
Sbjct: 317 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 496
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
INHEGEVNRARYMPQNP IIATKTPS+DVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 497 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 676
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
YGLSWN NL GHLLSASDDHT+CLWDISA PKEGK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 677 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 856
Query: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 298
SLFGSVADDQKLMIWDTRSN TSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 857 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1036
Query: 299 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 358
WDLRNLKLKLHSFESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 1037WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1216
Query: 359 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAE 418
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+P+ + +
Sbjct: 1217DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPE-GSVD 1393
Query: 419 LEGQGT 424
EGQG+
Sbjct: 1394PEGQGS 1411
>gb|BC003092.1|BC003092 Homo sapiens, Similar to retinoblastoma binding protein 4, clone
MGC:1393 IMAGE:3356558, mRNA, complete cds
Length = 2174
Score = 801 bits (2068), Expect = 0.0
Identities = 382/426 (89%), Positives = 402/426 (93%), Gaps = 2/426 (0%)
Frame = +3
Query: 1 MASKEV-LEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 59
MA KE +D VEERVI+EEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV+RPEGKD
Sbjct: 87 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 266
Query: 60 YALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIK 118
+++H LVLGTHTSDEQNHLV+A VQ+PNDD QFD S YDSEKGEFGGFGSV+GKIE EIK
Sbjct: 267 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 446
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
INHEGEVNRARYMPQNP IIATKTPS+DVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 447 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 626
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
YGLSWN NL GHLLSASDDHT+CLWDISA PKEGK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 627 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 806
Query: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 298
SLFGSVADDQKLMIWDTRSN TSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 807 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 986
Query: 299 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 358
WDLRNLKLKLHSFESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 987 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1166
Query: 359 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAE 418
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+P+ + +
Sbjct: 1167DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPE-GSVD 1343
Query: 419 LEGQGT 424
EGQG+
Sbjct: 1344PEGQGS 1361
>ref|NM_009030.1| Mus musculus retinoblastoma binding protein 4 (Rbbp4), mRNA
Length = 1961
Score = 799 bits (2064), Expect = 0.0
Identities = 381/426 (89%), Positives = 402/426 (93%), Gaps = 2/426 (0%)
Frame = +3
Query: 1 MASKEV-LEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 59
MA KE +D VEERVI+EEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV+RPEGKD
Sbjct: 108 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 287
Query: 60 YALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIK 118
+++H LVLGTHTSDEQNHLV+A VQ+PNDD QFD S YDSEKGEFGGFGSV+GKIE EIK
Sbjct: 288 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 467
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
INHEGEVNRARYMPQNP IIATKTPS+DVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 468 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 647
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
YGLSWN NL GHLLSASDDHT+CLWDISA PK+GK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 648 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 827
Query: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 298
SLFGSVADDQKLMIWDTRSN TSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 828 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1007
Query: 299 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 358
WDLRNLKLKLHSFESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 1008WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1187
Query: 359 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAE 418
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+P+ + +
Sbjct: 1188DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPE-GSVD 1364
Query: 419 LEGQGT 424
EGQG+
Sbjct: 1365PEGQGS 1382
>gb|U35141.1|MMU35141 Mus musculus retinoblastoma-binding protein (mRbAp48) mRNA,
complete cds
Length = 1961
Score = 799 bits (2064), Expect = 0.0
Identities = 381/426 (89%), Positives = 402/426 (93%), Gaps = 2/426 (0%)
Frame = +3
Query: 1 MASKEV-LEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 59
MA KE +D VEERVI+EEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV+RPEGKD
Sbjct: 108 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 287
Query: 60 YALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIK 118
+++H LVLGTHTSDEQNHLV+A VQ+PNDD QFD S YDSEKGEFGGFGSV+GKIE EIK
Sbjct: 288 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 467
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
INHEGEVNRARYMPQNP IIATKTPS+DVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 468 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 647
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
YGLSWN NL GHLLSASDDHT+CLWDISA PK+GK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 648 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 827
Query: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 298
SLFGSVADDQKLMIWDTRSN TSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 828 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1007
Query: 299 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 358
WDLRNLKLKLHSFESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 1008WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1187
Query: 359 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAE 418
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+P+ + +
Sbjct: 1188DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPE-GSVD 1364
Query: 419 LEGQGT 424
EGQG+
Sbjct: 1365PEGQGS 1382
>gb|AF097750.1|AF097750 Gallus gallus chromatin assembly factor 1 p48 subunit mRNA,
complete cds
Length = 2400
Score = 797 bits (2059), Expect = 0.0
Identities = 381/426 (89%), Positives = 401/426 (93%), Gaps = 2/426 (0%)
Frame = +2
Query: 1 MASKEV-LEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 59
MA KE +D VEERVI+EEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV+RPEGKD
Sbjct: 80 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 259
Query: 60 YALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIK 118
+++H LVLGTHTSDEQNHLV+A VQ+PNDD QFD S YDSEKGEFGGFGSV+GKIE EIK
Sbjct: 260 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 439
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
INHEGEVNRARYMPQNP IIATKTPS+DVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 440 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 619
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
YGLSWN NL GHLLSASDDHT+CLWDISA PKEGK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 620 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 799
Query: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 298
SLFGSVADDQKLMIWDTRSN TSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 800 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 979
Query: 299 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 358
WDLRNLKLKLHSFESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 980 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1159
Query: 359 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAE 418
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENI NDE+P+ + +
Sbjct: 1160DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENINNDEDPE-GSVD 1336
Query: 419 LEGQGT 424
EGQG+
Sbjct: 1337PEGQGS 1354
>gb|AF073787.1|AF073787 Xenopus laevis retinoblastoma A associated protein mRNA, complete
cds
Length = 1972
Score = 784 bits (2024), Expect = 0.0
Identities = 374/426 (87%), Positives = 398/426 (92%), Gaps = 2/426 (0%)
Frame = +1
Query: 1 MASKEV-LEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 59
MA KE +D VEERVI+EEYKIWKKNTPFLYDLVMTHALEWPSLT QWL DV+RP+GKD
Sbjct: 331 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLSDVTRPDGKD 510
Query: 60 YALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIK 118
+++H LVLGTHTSDEQNHLV+A VQ+PNDD QFD S YDSEKGEFGGFGSV+GKIE EIK
Sbjct: 511 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 690
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
I H+GEVNRARYMPQNP IIATKTP++DVLVFDYTKHPSKPDPSGECNP+LRLRGHQKEG
Sbjct: 691 ITHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPNLRLRGHQKEG 870
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
YGLSWN NL G+LLSASDDHT+CLWDISA PKEGK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 871 YGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 1050
Query: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 298
SLFGSVADDQKLMIWDTRSN TSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 1051SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1230
Query: 299 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 358
WDLRNLKLKLHSFESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 1231WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1410
Query: 359 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAE 418
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+ + +
Sbjct: 1411DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDTE-GGVD 1587
Query: 419 LEGQGT 424
EGQG+
Sbjct: 1588PEGQGS 1605
>emb|X71810.1|HSIEF9306 H.sapiens IEF 9306 mRNA
Length = 1417
Score = 776 bits (2003), Expect = 0.0
Identities = 369/404 (91%), Positives = 384/404 (94%), Gaps = 2/404 (0%)
Frame = +2
Query: 1 MASKEV-LEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 59
MA KE +D VEERVI+EEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV+RPEGKD
Sbjct: 74 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 253
Query: 60 YALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIK 118
+++H LVLGTHTSDEQNHLV+A VQ+PNDD QFD S YDSEKGEFGGFGSV+GKIE EIK
Sbjct: 254 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 433
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
INHEGEVNRARYMPQNP IIATKTPS+DVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 434 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 613
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
YGLSWN NL GHLLSASDDHT+CLWDISA PKEGK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 614 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 793
Query: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 298
SLFGSVADDQKLMIWDTRSN TSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 794 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 973
Query: 299 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 358
WDLRNLKLKLHSFESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 974 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1153
Query: 359 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQM
Sbjct: 1154DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 1285
Score = 57.8 bits (138), Expect = 2e-06
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Frame = +2
Query: 270 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHSFESHKDE 317
H EVN + P + I+AT + V ++D N L+L H+ E
Sbjct: 440 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRG---HQKE 610
Query: 318 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 377
+ + W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D
Sbjct: 611 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVED 769
Query: 378 FSWNPNEPWVICSVSEDNIMQIWQMAEN 405
SW+ + SV++D + IW N
Sbjct: 770 VSWHLLHESLFGSVADDQKLMIWDTRSN 853
>gb|U62388.1|DMU62388 Drosophila melanogaster chromatin assembly factor 1 p55 subunit
(p55) mRNA, complete cds
Length = 1807
Score = 773 bits (1997), Expect = 0.0
Identities = 361/417 (86%), Positives = 393/417 (93%), Gaps = 1/417 (0%)
Frame = +1
Query: 5 EVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHW 64
E +D VEERVI+EEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV++ +GKDY++H
Sbjct: 319 ESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHR 498
Query: 65 LVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEG 123
L+LGTHTSDEQNHL++A VQ+P++D QFD S YD+EKGEFGGFGSV GKIE EIKINHEG
Sbjct: 499 LILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEG 678
Query: 124 EVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSW 183
EVNRARYMPQN +IATKTPS+DVLVFDYTKHPSKP+PSGEC PDLRLRGHQKEGYGLSW
Sbjct: 679 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSW 858
Query: 184 NSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGS 243
N NL G+LLSASDDHT+CLWDI+A PKE +++DAK IFTGH+AVVEDVAWHLLHESLFGS
Sbjct: 859 NPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGS 1038
Query: 244 VADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 303
VADDQKLMIWDTR+N TSKPSH+VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN
Sbjct: 1039VADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 1218
Query: 304 LKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPE 363
LKLKLHSFESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPE
Sbjct: 1219LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 1398
Query: 364 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAELE 420
LLFIHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQ+WQMAEN+YNDEEP+I A+ELE
Sbjct: 1399LLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELE 1569
Score = 53.9 bits (128), Expect = 3e-05
Identities = 39/165 (23%), Positives = 70/165 (41%), Gaps = 10/165 (6%)
Frame = +1
Query: 121 HEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRG---HQKE 177
H EVN + P + +I+AT + V ++D N L+L H+ E
Sbjct: 1117 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHSFESHKDE 1260
Query: 178 GYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKA-------IFTGHSAVVED 230
+ + W+ + + L S+ D + +WD+S +E DA+ I GH+A + D
Sbjct: 1261 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 1440
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVN 275
+W+ + SV++D + +W N + + A E N
Sbjct: 1441 FSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETN 1575
>ref|NM_079630.1| Drosophila melanogaster Chromatin assembly factor 1 subunit (Caf1),
mRNA
Length = 1849
Score = 773 bits (1997), Expect = 0.0
Identities = 361/417 (86%), Positives = 393/417 (93%), Gaps = 1/417 (0%)
Frame = +3
Query: 5 EVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHW 64
E +D VEERVI+EEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV++ +GKDY++H
Sbjct: 345 ESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHR 524
Query: 65 LVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEG 123
L+LGTHTSDEQNHL++A VQ+P++D QFD S YD+EKGEFGGFGSV GKIE EIKINHEG
Sbjct: 525 LILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEG 704
Query: 124 EVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSW 183
EVNRARYMPQN +IATKTPS+DVLVFDYTKHPSKP+PSGEC PDLRLRGHQKEGYGLSW
Sbjct: 705 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSW 884
Query: 184 NSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGS 243
N NL G+LLSASDDHT+CLWDI+A PKE +++DAK IFTGH+AVVEDVAWHLLHESLFGS
Sbjct: 885 NPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGS 1064
Query: 244 VADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 303
VADDQKLMIWDTR+N TSKPSH+VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN
Sbjct: 1065VADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 1244
Query: 304 LKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPE 363
LKLKLHSFESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPE
Sbjct: 1245LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 1424
Query: 364 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAELE 420
LLFIHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQ+WQMAEN+YNDEEP+I A+ELE
Sbjct: 1425LLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELE 1595
Score = 53.9 bits (128), Expect = 3e-05
Identities = 39/165 (23%), Positives = 70/165 (41%), Gaps = 10/165 (6%)
Frame = +3
Query: 121 HEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRG---HQKE 177
H EVN + P + +I+AT + V ++D N L+L H+ E
Sbjct: 1143 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHSFESHKDE 1286
Query: 178 GYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKA-------IFTGHSAVVED 230
+ + W+ + + L S+ D + +WD+S +E DA+ I GH+A + D
Sbjct: 1287 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 1466
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVN 275
+W+ + SV++D + +W N + + A E N
Sbjct: 1467 FSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETN 1601
>gb|AY061408.1| Drosophila melanogaster LD33761 full length cDNA
Length = 1849
Score = 773 bits (1997), Expect = 0.0
Identities = 361/417 (86%), Positives = 393/417 (93%), Gaps = 1/417 (0%)
Frame = +3
Query: 5 EVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHW 64
E +D VEERVI+EEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV++ +GKDY++H
Sbjct: 345 ESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHR 524
Query: 65 LVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEG 123
L+LGTHTSDEQNHL++A VQ+P++D QFD S YD+EKGEFGGFGSV GKIE EIKINHEG
Sbjct: 525 LILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEG 704
Query: 124 EVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSW 183
EVNRARYMPQN +IATKTPS+DVLVFDYTKHPSKP+PSGEC PDLRLRGHQKEGYGLSW
Sbjct: 705 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSW 884
Query: 184 NSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGS 243
N NL G+LLSASDDHT+CLWDI+A PKE +++DAK IFTGH+AVVEDVAWHLLHESLFGS
Sbjct: 885 NPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGS 1064
Query: 244 VADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 303
VADDQKLMIWDTR+N TSKPSH+VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN
Sbjct: 1065VADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 1244
Query: 304 LKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPE 363
LKLKLHSFESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPE
Sbjct: 1245LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 1424
Query: 364 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAELE 420
LLFIHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQ+WQMAEN+YNDEEP+I A+ELE
Sbjct: 1425LLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELE 1595
Score = 53.9 bits (128), Expect = 3e-05
Identities = 39/165 (23%), Positives = 70/165 (41%), Gaps = 10/165 (6%)
Frame = +3
Query: 121 HEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRG---HQKE 177
H EVN + P + +I+AT + V ++D N L+L H+ E
Sbjct: 1143 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHSFESHKDE 1286
Query: 178 GYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKA-------IFTGHSAVVED 230
+ + W+ + + L S+ D + +WD+S +E DA+ I GH+A + D
Sbjct: 1287 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 1466
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVN 275
+W+ + SV++D + +W N + + A E N
Sbjct: 1467 FSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETN 1601
>gb|AE003708.2|AE003708 Drosophila melanogaster genomic scaffold 142000013386035 section 33 of
105, complete sequence
Length = 235457
Score = 453 bits (1165), Expect(2) = 0.0
Identities = 211/234 (90%), Positives = 226/234 (96%)
Frame = +2
Query: 187 LKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVAD 246
L G+LLSASDDHT+CLWDI+A PKE +++DAK IFTGH+AVVEDVAWHLLHESLFGSVAD
Sbjct: 29201 LTGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD 29380
Query: 247 DQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 306
DQKLMIWDTR+N TSKPSH+VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL
Sbjct: 29381 DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 29560
Query: 307 KLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLF 366
KLHSFESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLF
Sbjct: 29561 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 29740
Query: 367 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAELE 420
IHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQ+WQMAEN+YNDEEP+I A+ELE
Sbjct: 29741 IHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELE 29902
Score = 328 bits (841), Expect(2) = 0.0
Identities = 152/186 (81%), Positives = 169/186 (90%), Gaps = 1/186 (0%)
Frame = +3
Query: 5 EVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHW 64
E +D VEERVI+EEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV++ +GKDY++H
Sbjct: 28542 ESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHR 28721
Query: 65 LVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEG 123
L+LGTHTSDEQNHL++A VQ+P++D QFD S YD+EKGEFGGFGSV GKIE EIKINHEG
Sbjct: 28722 LILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEG 28901
Query: 124 EVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSW 183
EVNRARYMPQN +IATKTPS+DVLVFDYTKHPSKP+PSGEC PDLRLRGHQKEGYGLSW
Sbjct: 28902 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSW 29081
Query: 184 NSNLKG 189
N NL G
Sbjct: 29082 NPNLNG 29099
Score = 53.9 bits (128), Expect = 3e-05
Identities = 39/165 (23%), Positives = 70/165 (41%), Gaps = 10/165 (6%)
Frame = +2
Query: 121 HEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRG---HQKE 177
H EVN + P + +I+AT + V ++D N L+L H+ E
Sbjct: 29450 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHSFESHKDE 29593
Query: 178 GYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKA-------IFTGHSAVVED 230
+ + W+ + + L S+ D + +WD+S +E DA+ I GH+A + D
Sbjct: 29594 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 29773
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVN 275
+W+ + SV++D + +W N + + A E N
Sbjct: 29774 FSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETN 29908
>gb|AC009904.7| Drosophila melanogaster, chromosome 3R, region 88E-88E, BAC clone
BACR32A03, complete sequence
Length = 182601
Score = 453 bits (1165), Expect(2) = 0.0
Identities = 211/234 (90%), Positives = 226/234 (96%)
Frame = +3
Query: 187 LKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVAD 246
L G+LLSASDDHT+CLWDI+A PKE +++DAK IFTGH+AVVEDVAWHLLHESLFGSVAD
Sbjct: 136653 LTGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD 136832
Query: 247 DQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 306
DQKLMIWDTR+N TSKPSH+VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL
Sbjct: 136833 DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 137012
Query: 307 KLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLF 366
KLHSFESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLF
Sbjct: 137013 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 137192
Query: 367 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAELE 420
IHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQ+WQMAEN+YNDEEP+I A+ELE
Sbjct: 137193 IHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELE 137354
Score = 328 bits (841), Expect(2) = 0.0
Identities = 152/186 (81%), Positives = 169/186 (90%), Gaps = 1/186 (0%)
Frame = +1
Query: 5 EVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHW 64
E +D VEERVI+EEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV++ +GKDY++H
Sbjct: 135994 ESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHR 136173
Query: 65 LVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEG 123
L+LGTHTSDEQNHL++A VQ+P++D QFD S YD+EKGEFGGFGSV GKIE EIKINHEG
Sbjct: 136174 LILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEG 136353
Query: 124 EVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSW 183
EVNRARYMPQN +IATKTPS+DVLVFDYTKHPSKP+PSGEC PDLRLRGHQKEGYGLSW
Sbjct: 136354 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSW 136533
Query: 184 NSNLKG 189
N NL G
Sbjct: 136534 NPNLNG 136551
Score = 53.9 bits (128), Expect = 3e-05
Identities = 39/165 (23%), Positives = 70/165 (41%), Gaps = 10/165 (6%)
Frame = +3
Query: 121 HEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRG---HQKE 177
H EVN + P + +I+AT + V ++D N L+L H+ E
Sbjct: 136902 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHSFESHKDE 137045
Query: 178 GYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKA-------IFTGHSAVVED 230
+ + W+ + + L S+ D + +WD+S +E DA+ I GH+A + D
Sbjct: 137046 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 137225
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVN 275
+W+ + SV++D + +W N + + A E N
Sbjct: 137226 FSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETN 137360
>ref|XM_030409.1| Homo sapiens similar to retinoblastoma-binding protein 4; RbAp48;
chromatin assembly factor/CAF-1 p48 subunit; MSI1
protein homolog; retinoblastoma-binding protein p48
(LOC115197), mRNA
Length = 2305
Score = 754 bits (1947), Expect = 0.0
Identities = 363/426 (85%), Positives = 392/426 (91%), Gaps = 2/426 (0%)
Frame = +1
Query: 1 MASKEV-LEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 59
MA KE ++TVEE VI++EYKIWKKNTPFLY+LVMTHALEWPSLT QWLPDV+RPEGKD
Sbjct: 85 MADKEAAFDNTVEE*VINKEYKIWKKNTPFLYNLVMTHALEWPSLTAQWLPDVTRPEGKD 264
Query: 60 YALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIK 118
++LH LVLGTHTSDEQNHLV+A VQ+P+DD QFD S YD EKGEFGGFGSV+GKIE EIK
Sbjct: 265 FSLHRLVLGTHTSDEQNHLVIASVQLPDDDAQFDASHYDREKGEFGGFGSVSGKIEIEIK 444
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
INHEG+VNRARYMPQNP II TKTPS+D+LVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 445 INHEGKVNRARYMPQNPCIITTKTPSSDILVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 624
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
YGLSWN NL GHLLSASDDHT+CLWDISA PKEGK+VDAK IFTGH+A+VEDV+WHLL E
Sbjct: 625 YGLSWNLNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAIVEDVSWHLLCE 804
Query: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 298
SLFGSVADDQKLMIWDTRSN TSKPSHSVD HTAEVNCLSF+PYSEFILATGSADKTVAL
Sbjct: 805 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDTHTAEVNCLSFSPYSEFILATGSADKTVAL 984
Query: 299 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 358
WDLRNLKLKLHSFESHKDEIFQV WSPHNETILASSGTD R NV DLSKIGEEQS EDAE
Sbjct: 985 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDHRPNV*DLSKIGEEQSPEDAE 1164
Query: 359 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAE 418
D PPELLFIHGGHTAKI DFSWNP+EP V+CSVSEDNIMQ+WQMAENIYNDE+P+ + +
Sbjct: 1165DRPPELLFIHGGHTAKIPDFSWNPSEP*VMCSVSEDNIMQVWQMAENIYNDEDPE-GSMD 1341
Query: 419 LEGQGT 424
EGQG+
Sbjct: 1342PEGQGS 1359
>ref|XM_030423.1| Homo sapiens similar to retinoblastoma binding protein 4 (H.
sapiens) (LOC153102), mRNA
Length = 1401
Score = 729 bits (1883), Expect = 0.0
Identities = 350/404 (86%), Positives = 374/404 (91%), Gaps = 2/404 (0%)
Frame = +1
Query: 1 MASKEV-LEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 59
MA KE ++TVEE VI++EYKIWKKNTPFLY+LVMTHALEWPSLT QWLPDV+RPEGKD
Sbjct: 64 MADKEAAFDNTVEE*VINKEYKIWKKNTPFLYNLVMTHALEWPSLTAQWLPDVTRPEGKD 243
Query: 60 YALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIK 118
++LH LVLGTHTSDEQNHLV+A VQ+P+DD QFD S YD EKGEFGGFGSV+GKIE EIK
Sbjct: 244 FSLHRLVLGTHTSDEQNHLVIASVQLPDDDAQFDASHYDREKGEFGGFGSVSGKIEIEIK 423
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
INHEG+VNRARYMPQNP II TKTPS+D+LVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 424 INHEGKVNRARYMPQNPCIITTKTPSSDILVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 603
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
YGLSWN NL GHLLSASDDHT+CLWDISA PKEGK+VDAK IFTGH+A+VEDV+WHLL E
Sbjct: 604 YGLSWNLNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAIVEDVSWHLLCE 783
Query: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 298
SLFGSVADDQKLMIWDTRSN TSKPSHSVD HTAEVNCLSF+PYSEFILATGSADKTVAL
Sbjct: 784 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDTHTAEVNCLSFSPYSEFILATGSADKTVAL 963
Query: 299 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 358
WDLRNLKLKLHSFESHKDEIFQV WSPHNETILASSGTD R NV DLSKIGEEQS EDAE
Sbjct: 964 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDHRPNV*DLSKIGEEQSPEDAE 1143
Query: 359 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
D PPELLFIHGGHTAKI DFSWNP+EP V+CSVSEDNIMQ+WQM
Sbjct: 1144DRPPELLFIHGGHTAKIPDFSWNPSEP*VMCSVSEDNIMQVWQM 1275
>gb|BC015123.1|BC015123 Homo sapiens, Similar to retinoblastoma-binding protein 4, clone
IMAGE:3686783, mRNA, partial cds
Length = 2071
Score = 694 bits (1792), Expect = 0.0
Identities = 331/365 (90%), Positives = 347/365 (94%), Gaps = 1/365 (0%)
Frame = +1
Query: 61 ALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKI 119
++H LVLGTHTSDEQNHLV+A VQ+PNDD QFD S YDSEKGEFGGFGSV+GKIE EIKI
Sbjct: 4 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 183
Query: 120 NHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY 179
NHEGEVNRARYMPQNP IIATKTPS+DVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY
Sbjct: 184 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY 363
Query: 180 GLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 239
GLSWN NL GHLLSASDDHT+CLWDISA PKEGK+VDAK IFTGH+AVVEDV+WHLLHES
Sbjct: 364 GLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES 543
Query: 240 LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 299
LFGSVADDQKLMIWDTRSN TSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 544 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 723
Query: 300 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 359
DLRNLKLKLHSFESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAED
Sbjct: 724 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAED 903
Query: 360 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAEL 419
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+P+ + +
Sbjct: 904 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPE-GSVDP 1080
Query: 420 EGQGT 424
EGQG+
Sbjct: 1081EGQGS 1095
>emb|AL390237.9|AL390237 Human DNA sequence from clone RP11-278J20 on chromosome 6. Contains
ESTs, STSs and GSSs. Contains an RBBP4
(retinoblastoma-binding protein 4) pseudogene and a
KIAA0797 pseudogene, complete sequence [Homo sapiens]
Length = 140120
Score = 360 bits (924), Expect(3) = 0.0
Identities = 173/215 (80%), Positives = 187/215 (86%), Gaps = 2/215 (0%)
Frame = +1
Query: 1 MASKEV-LEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 59
MA KE +D VEERVI+EEYK WKKNTPFLYDLV+THALEWPSLT QWLPDV+RPEGKD
Sbjct: 32392 MADKEAAFDDAVEERVINEEYKKWKKNTPFLYDLVLTHALEWPSLTAQWLPDVTRPEGKD 32571
Query: 60 YALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIK 118
+++H LVLGT T DEQNHLV+A VQ+PNDD QFD S Y++EKGEFGGF SV GKIE EI
Sbjct: 32572 FSIHQLVLGTCTLDEQNHLVIASVQLPNDDTQFDASHYNTEKGEFGGFYSVRGKIEIEIN 32751
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
INHEGEVN+ RYMPQNP II+TKTPS+DVLVFDYTKHPSKPDPSGECNPDL L GHQKEG
Sbjct: 32752 INHEGEVNKVRYMPQNPCIISTKTPSSDVLVFDYTKHPSKPDPSGECNPDLCLCGHQKEG 32931
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGK 213
YGLSWN NL GHLL ASDDHT CLWD SA PKEGK
Sbjct: 32932 YGLSWNPNLCGHLLGASDDHTSCLWDSSAVPKEGK 33036
Score = 251 bits (642), Expect(3) = 0.0
Identities = 122/147 (82%), Positives = 132/147 (88%)
Frame = +3
Query: 276 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSG 335
CLSFNPYSEFILATGSADKTVAL DLRNLKLKLHSFE KD+IFQV WSPHNETILASSG
Sbjct: 33234 CLSFNPYSEFILATGSADKTVALRDLRNLKLKLHSFELLKDKIFQVQWSPHNETILASSG 33413
Query: 336 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 395
T+ RLNVWDLSKIGE+QS ED +D PPELLFIHGGHTAKI DFS NPNEPWVICSV EDN
Sbjct: 33414 TNHRLNVWDLSKIGEKQSPEDKKDRPPELLFIHGGHTAKIPDFSGNPNEPWVICSVPEDN 33593
Query: 396 IMQIWQMAENIYNDEEPDIAAAELEGQ 422
IMQ+WQMAENIYN+E+P+ + + EGQ
Sbjct: 33594 IMQVWQMAENIYNNEDPE-GSVDPEGQ 33671
Score = 115 bits (289), Expect(3) = 0.0
Identities = 54/62 (87%), Positives = 58/62 (93%)
Frame = +2
Query: 213 KIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTA 272
K+VD K IFTGH+AVVEDV+WHLLHESLFGSVADDQKLMIWDT SN+ SKPSHSVDAHTA
Sbjct: 33035 KVVDVKIIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTCSNSASKPSHSVDAHTA 33214
Query: 273 EV 274
EV
Sbjct: 33215 EV 33220
Score = 32.0 bits (71), Expect(2) = 0.046
Identities = 14/43 (32%), Positives = 22/43 (50%)
Frame = +2
Query: 363 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 405
++ I GHTA + D SW+ + SV++D + IW N
Sbjct: 33044 DVKIIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTCSN 33172
Score = 30.0 bits (66), Expect(2) = 0.046
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 9/99 (9%)
Frame = +1
Query: 270 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES---------HKDEIFQ 320
H EVN + + P + I++T + V ++D K H+ E +
Sbjct: 32758 HEGEVNKVRYMPQNPCIISTKTPSSDVLVFDYTKHPSKPDPSGECNPDLCLCGHQKEGYG 32937
Query: 321 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 359
+ W+P+ L + D +WD S + +E + ED
Sbjct: 32938 LSWNPNLCGHLLGASDDHTSCLWDSSAVPKEGKSGGCED 33054
>gb|AE000658.1|HUAE000658 Homo sapiens T-cell receptor alpha delta locus from bases 1 to 250529
(section 1 of 5) of the Complete Nucleotide Sequence
Length = 250529
Score = 576 bits (1484), Expect(3) = 0.0
Identities = 284/338 (84%), Positives = 302/338 (89%), Gaps = 1/338 (0%)
Frame = +3
Query: 86 PNDDQ-FDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMPQNPYIIATKTPS 144
PND+ FD S YDSEKGEFGGFGSV+G IE EIKINHEGEVNRARYMPQN II TKTPS
Sbjct: 69849 PNDNA*FDASHYDSEKGEFGGFGSVSGNIEIEIKINHEGEVNRARYMPQNSCIIKTKTPS 70028
Query: 145 ADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWD 204
+DVLVFDYTK+PSKPDPSGECNPDLRL GHQKEGYGLSWN NL GHLLSASDDHTVCLWD
Sbjct: 70029 SDVLVFDYTKYPSKPDPSGECNPDLRLCGHQKEGYGLSWNPNLSGHLLSASDDHTVCLWD 70208
Query: 205 ISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS 264
ISA PKEGK VDA+ IFTGH+AVVEDV W+LLHESLF VADDQKLMIWDTRS TSKPS
Sbjct: 70209 ISAIPKEGK-VDARTIFTGHTAVVEDVFWNLLHESLFRLVADDQKLMIWDTRSKNTSKPS 70385
Query: 265 HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWS 324
HSVDA+TAEVNCLSFNPY EFILATGSADKTVALWDLRNLKLK+HSFESHKDEIFQV WS
Sbjct: 70386 HSVDAYTAEVNCLSFNPYGEFILATGSADKTVALWDLRNLKLKVHSFESHKDEIFQVQWS 70565
Query: 325 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNE 384
PHNETILASSGTD LNVWDLSKI EEQS EDAED PPE LFIHGGHTAKI DFS NP+E
Sbjct: 70566 PHNETILASSGTDHGLNVWDLSKITEEQSPEDAEDRPPE-LFIHGGHTAKIPDFSLNPSE 70742
Query: 385 PWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAELEGQ 422
PW+ICSVSE+NIM++WQMAENI N E+P+ + + EGQ
Sbjct: 70743 PWMICSVSENNIMEVWQMAENISNGEDPE-GSVDPEGQ 70853
Score = 73.2 bits (178), Expect(3) = 0.0
Identities = 33/42 (78%), Positives = 37/42 (87%)
Frame = +1
Query: 43 SLTVQWLPDVSRPEGKDYALHWLVLGTHTSDEQNHLVVARVQ 84
SLTVQWLPD RPEGKD+++H LVLGTHT DEQNHLV+A VQ
Sbjct: 69721 SLTVQWLPDEIRPEGKDFSIHRLVLGTHTLDEQNHLVIASVQ 69846
Score = 57.0 bits (136), Expect(3) = 0.0
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 14 RVISEEYKIWKKNTPFLYDLVMTHALEWPS 43
RVI++EYKI KKNTPFLY LVMTHALEWP+
Sbjct: 69635 RVINDEYKIRKKNTPFLYHLVMTHALEWPA 69724
>ref|NM_060151.1| chromatin assembly factor 1 P55 subunit like
Length = 1254
Score = 630 bits (1626), Expect = e-179
Identities = 297/418 (71%), Positives = 355/418 (84%), Gaps = 2/418 (0%)
Frame = +1
Query: 7 LED-TVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWL 65
LED T E+RV ++EYKIWKKNTPFLYDLVMTHALEWPSL+VQWLPDV++ + D+ +H L
Sbjct: 10 LEDGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAK-DNSDHTIHRL 186
Query: 66 VLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGE 124
+LGTHTSDEQNHL+++++ +P DD QFD S+YD+E+ E+GGFG+V GK+E +I+INHEGE
Sbjct: 187 ILGTHTSDEQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGE 366
Query: 125 VNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWN 184
VNRARYMPQ IIATK+P ADV +FDY KH + P + NP +RL+GH KEGYGLSWN
Sbjct: 367 VNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDN-TFNPLIRLKGHTKEGYGLSWN 543
Query: 185 SNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSV 244
N +G +LSASDD TVC WDI+A + AK +F GH +VVEDVAWH+LH+ +FGSV
Sbjct: 544 PNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSV 723
Query: 245 ADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 304
DD+KL+IWD R TS P H +DAH+AEVNCL+FNPYSEFILATGSADKTVALWDLRNL
Sbjct: 724 GDDKKLLIWDVR---TSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNL 894
Query: 305 KLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 364
++KLHSFESH+DEIFQV WSPHNETILASSGTD+RL+VWDLSKIGE+QSAEDAEDGPPEL
Sbjct: 895 RMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPEL 1074
Query: 365 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAELEGQ 422
LFIHGGHTAKISDFSWNPNEPWV+CSVSEDNI+Q+WQMA+NIYN+ + + A +E Q
Sbjct: 1075LFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPADVVERQ 1248
>gb|AF116530.1|AF116530 Caenorhabditis elegans synthetic multivulva protein LIN-53 p48
(lin-53) mRNA, complete cds
Length = 1470
Score = 630 bits (1626), Expect = e-179
Identities = 297/418 (71%), Positives = 355/418 (84%), Gaps = 2/418 (0%)
Frame = +2
Query: 7 LED-TVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWL 65
LED T E+RV ++EYKIWKKNTPFLYDLVMTHALEWPSL+VQWLPDV++ + D+ +H L
Sbjct: 35 LEDGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAK-DNSDHTIHRL 211
Query: 66 VLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGE 124
+LGTHTSDEQNHL+++++ +P DD QFD S+YD+E+ E+GGFG+V GK+E +I+INHEGE
Sbjct: 212 ILGTHTSDEQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGE 391
Query: 125 VNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWN 184
VNRARYMPQ IIATK+P ADV +FDY KH + P + NP +RL+GH KEGYGLSWN
Sbjct: 392 VNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDN-TFNPLIRLKGHTKEGYGLSWN 568
Query: 185 SNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSV 244
N +G +LSASDD TVC WDI+A + AK +F GH +VVEDVAWH+LH+ +FGSV
Sbjct: 569 PNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSV 748
Query: 245 ADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 304
DD+KL+IWD R TS P H +DAH+AEVNCL+FNPYSEFILATGSADKTVALWDLRNL
Sbjct: 749 GDDKKLLIWDVR---TSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNL 919
Query: 305 KLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 364
++KLHSFESH+DEIFQV WSPHNETILASSGTD+RL+VWDLSKIGE+QSAEDAEDGPPEL
Sbjct: 920 RMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPEL 1099
Query: 365 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAELEGQ 422
LFIHGGHTAKISDFSWNPNEPWV+CSVSEDNI+Q+WQMA+NIYN+ + + A +E Q
Sbjct: 1100LFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPADVVERQ 1273
>ref|XM_069157.2| Homo sapiens similar to CHROMATIN ASSEMBLY FACTOR 1 P48 SUBUNIT
(CAF-1 P48 SUBUNIT) (RETINOBLASTOMA BINDING PROTEIN P48)
(RETINOBLASTOMA-BINDING PROTEIN 4) (MSI1 PROTEIN
HOMOLOG) (LOC135054), mRNA
Length = 1221
Score = 628 bits (1619), Expect = e-178
Identities = 319/427 (74%), Positives = 346/427 (80%), Gaps = 5/427 (1%)
Frame = +1
Query: 1 MASKEV-LEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 59
MA KE +DTVEERVI+EEYK WKKNTPFLYDLV+THA+EWPSLT QWLPDV RPEGKD
Sbjct: 1 MADKEAAFDDTVEERVINEEYKKWKKNTPFLYDLVLTHAVEWPSLTAQWLPDVIRPEGKD 180
Query: 60 YALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIK 118
+++H LVLGT+T DEQNHLV+ VQ+PNDD QFD S Y++EKGEFGGF SV GKIE EIK
Sbjct: 181 FSIHQLVLGTYTLDEQNHLVITSVQLPNDDTQFDASHYNTEKGEFGGFYSVRGKIEIEIK 360
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
INHEGEVN+ RYMPQN II+TKTPS+DVLVFDYTKHPSK DPSGEC+PDL LRGHQKEG
Sbjct: 361 INHEGEVNKVRYMPQNSCIISTKTPSSDVLVFDYTKHPSKQDPSGECDPDLCLRGHQKEG 540
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
YGLSWN NL GHLLSA T W H+AVV DV+WHLLHE
Sbjct: 541 YGLSWNPNLCGHLLSAQMT-TPAAW--------------------HTAVV-DVSWHLLHE 654
Query: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLS---FNPYSEFILATGSADKT 295
SLFGSVA DQKLMIW T S++ SKPSHSVDAHTAEV F EFILATGSADKT
Sbjct: 655 SLFGSVAGDQKLMIWGTCSHSASKPSHSVDAHTAEVTLTLLPLFQSLYEFILATGSADKT 834
Query: 296 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 355
VAL DLRNLKLKLHSFE HKD+IFQ WSPHNETILASSGT+ RLNVWDLSKIGE+QS E
Sbjct: 835 VALRDLRNLKLKLHSFELHKDKIFQFQWSPHNETILASSGTNHRLNVWDLSKIGEKQSPE 1014
Query: 356 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIA 415
D EDGPPELLFIHGGHTAKI DFSWNPNEPWVICSV EDNIMQ+WQMAENIYNDE P+
Sbjct: 1015DKEDGPPELLFIHGGHTAKIPDFSWNPNEPWVICSVPEDNIMQVWQMAENIYNDEYPE-G 1191
Query: 416 AAELEGQ 422
+ + EGQ
Sbjct: 1192SVDPEGQ 1212
>ref|XM_063256.2| Homo sapiens similar to retinoblastoma binding protein 4
(LOC122670), mRNA
Length = 1281
Score = 621 bits (1601), Expect = e-176
Identities = 307/379 (81%), Positives = 332/379 (87%)
Frame = +1
Query: 44 LTVQWLPDVSRPEGKDYALHWLVLGTHTSDEQNHLVVARVQIPNDDQFDTSQYDSEKGEF 103
LTVQWLPD RPEGKD+++H LVLGTHT DEQNHLV+A VQ P +++ + KGEF
Sbjct: 46 LTVQWLPDEIRPEGKDFSIHRLVLGTHTLDEQNHLVIASVQ-PLMIMLSLTRHTTTKGEF 222
Query: 104 GGFGSVTGKIETEIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSG 163
GGFGSV+G IE EIKINHEGEVNRARYMPQN II TKTPS+DVLVFDYTK+PSKPDPSG
Sbjct: 223 GGFGSVSGNIEIEIKINHEGEVNRARYMPQNSCIIKTKTPSSDVLVFDYTKYPSKPDPSG 402
Query: 164 ECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTG 223
ECNPDLRL GHQKEGYGLSWN NL GHLLSASDDHTVCLWDISA PKEGK VDA+ IFTG
Sbjct: 403 ECNPDLRLCGHQKEGYGLSWNPNLSGHLLSASDDHTVCLWDISAIPKEGK-VDARTIFTG 579
Query: 224 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYS 283
H+AVVEDV W+LLHESLF VADDQKLMIWDTRS TSKPSHSVDA+TAEVNCLSFNPY
Sbjct: 580 HTAVVEDVFWNLLHESLFRLVADDQKLMIWDTRSKNTSKPSHSVDAYTAEVNCLSFNPYG 759
Query: 284 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 343
EFILATGSADKTVALWDLRNLKLK+HSFESHKDEIFQV WSPHNETILASSGTD LNVW
Sbjct: 760 EFILATGSADKTVALWDLRNLKLKVHSFESHKDEIFQVQWSPHNETILASSGTDHGLNVW 939
Query: 344 DLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
DLSKI EEQS EDAED PPE LFIHGGHTAKI DFS NP+EPW+ICSVSE+NIM++WQMA
Sbjct: 940 DLSKITEEQSPEDAEDRPPE-LFIHGGHTAKIPDFSLNPSEPWMICSVSENNIMEVWQMA 1116
Query: 404 ENIYNDEEPDIAAAELEGQ 422
ENI N E+P+ + + EGQ
Sbjct: 1117ENISNGEDPE-GSVDPEGQ 1170
>gb|AY059874.1| Arabidopsis thaliana WD-40 repeat protein MSI1 (At5g58230; MCK7.10)
mRNA, complete cds
Length = 1607
Score = 585 bits (1507), Expect = e-165
Identities = 276/410 (67%), Positives = 334/410 (81%), Gaps = 2/410 (0%)
Frame = +3
Query: 4 KEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALH 63
+E + +EER+I+EEYKIWKKNTPFLYDLV+THALEWPSLTV+WLPD P GKDY++
Sbjct: 93 EEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQ 272
Query: 64 WLVLGTHTSD-EQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINH 121
++LGTHTS+ E N+L++A+VQ+P DD + + QYD ++ EFGGFG TGK++ +INH
Sbjct: 273 KMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQQINH 452
Query: 122 EGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGL 181
+GEVNRARYMPQNP+IIATKT +A+V VFDY+KHPSKP G CNPDL+LRGH EGYGL
Sbjct: 453 DGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGL 632
Query: 182 SWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLF 241
SW+ +GHLLS SDD +CLWDI+A PK K +DA+ IF H VVEDVAWHL HE LF
Sbjct: 633 SWSKFKQGHLLSGSDDAQICLWDINATPKN-KSLDAQQIFKAHEGVVEDVAWHLRHEYLF 809
Query: 242 GSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 301
GSV DDQ L+IWD RS + SKP SV AH+ EVNCL+FNP++E+++ATGS DKTV L+DL
Sbjct: 810 GSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDL 989
Query: 302 RNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGP 361
R L LH+F+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGP
Sbjct: 990 RKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGP 1169
Query: 362 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 411
PELLFIHGGHT+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+
Sbjct: 1170PELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 1319
Score = 50.8 bits (120), Expect = 2e-04
Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 12/163 (7%)
Frame = +3
Query: 270 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHSFESHKDE 317
H EVN + P + FI+AT + + V ++D N LKL H E
Sbjct: 450 HDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRG---HSSE 620
Query: 318 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 377
+ + WS + L S D ++ +WD++ + +S + + I H + D
Sbjct: 621 GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQ--------IFKAHEGVVED 776
Query: 378 FSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAELE 420
+W+ ++ SV +D + IW + + + A +E
Sbjct: 777 VAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSME 905
>ref|NM_125208.1| WD-40 repeat protein MSI1 (sp|O22467); also highly similar to G1/S
transition control protein-binding protein RbAp46
Length = 1538
Score = 585 bits (1507), Expect = e-165
Identities = 276/410 (67%), Positives = 334/410 (81%), Gaps = 2/410 (0%)
Frame = +1
Query: 4 KEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALH 63
+E + +EER+I+EEYKIWKKNTPFLYDLV+THALEWPSLTV+WLPD P GKDY++
Sbjct: 88 EEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQ 267
Query: 64 WLVLGTHTSD-EQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINH 121
++LGTHTS+ E N+L++A+VQ+P DD + + QYD ++ EFGGFG TGK++ +INH
Sbjct: 268 KMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQQINH 447
Query: 122 EGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGL 181
+GEVNRARYMPQNP+IIATKT +A+V VFDY+KHPSKP G CNPDL+LRGH EGYGL
Sbjct: 448 DGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGL 627
Query: 182 SWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLF 241
SW+ +GHLLS SDD +CLWDI+A PK K +DA+ IF H VVEDVAWHL HE LF
Sbjct: 628 SWSKFKQGHLLSGSDDAQICLWDINATPKN-KSLDAQQIFKAHEGVVEDVAWHLRHEYLF 804
Query: 242 GSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 301
GSV DDQ L+IWD RS + SKP SV AH+ EVNCL+FNP++E+++ATGS DKTV L+DL
Sbjct: 805 GSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDL 984
Query: 302 RNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGP 361
R L LH+F+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGP
Sbjct: 985 RKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGP 1164
Query: 362 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 411
PELLFIHGGHT+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+
Sbjct: 1165PELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 1314
Score = 50.8 bits (120), Expect = 2e-04
Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 12/163 (7%)
Frame = +1
Query: 270 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHSFESHKDE 317
H EVN + P + FI+AT + + V ++D N LKL H E
Sbjct: 445 HDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRG---HSSE 615
Query: 318 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 377
+ + WS + L S D ++ +WD++ + +S + + I H + D
Sbjct: 616 GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQ--------IFKAHEGVVED 771
Query: 378 FSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAELE 420
+W+ ++ SV +D + IW + + + A +E
Sbjct: 772 VAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSME 900
>gb|AF016846.1|AF016846 Arabidopsis thaliana WD-40 repeat protein (MSI1) mRNA, complete cds
Length = 1538
Score = 585 bits (1507), Expect = e-165
Identities = 276/410 (67%), Positives = 334/410 (81%), Gaps = 2/410 (0%)
Frame = +1
Query: 4 KEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALH 63
+E + +EER+I+EEYKIWKKNTPFLYDLV+THALEWPSLTV+WLPD P GKDY++
Sbjct: 88 EEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQ 267
Query: 64 WLVLGTHTSD-EQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINH 121
++LGTHTS+ E N+L++A+VQ+P DD + + QYD ++ EFGGFG TGK++ +INH
Sbjct: 268 KMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQQINH 447
Query: 122 EGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGL 181
+GEVNRARYMPQNP+IIATKT +A+V VFDY+KHPSKP G CNPDL+LRGH EGYGL
Sbjct: 448 DGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGL 627
Query: 182 SWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLF 241
SW+ +GHLLS SDD +CLWDI+A PK K +DA+ IF H VVEDVAWHL HE LF
Sbjct: 628 SWSKFKQGHLLSGSDDAQICLWDINATPKN-KSLDAQQIFKAHEGVVEDVAWHLRHEYLF 804
Query: 242 GSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 301
GSV DDQ L+IWD RS + SKP SV AH+ EVNCL+FNP++E+++ATGS DKTV L+DL
Sbjct: 805 GSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDL 984
Query: 302 RNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGP 361
R L LH+F+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGP
Sbjct: 985 RKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGP 1164
Query: 362 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 411
PELLFIHGGHT+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+
Sbjct: 1165PELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 1314
Score = 50.8 bits (120), Expect = 2e-04
Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 12/163 (7%)
Frame = +1
Query: 270 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHSFESHKDE 317
H EVN + P + FI+AT + + V ++D N LKL H E
Sbjct: 445 HDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRG---HSSE 615
Query: 318 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 377
+ + WS + L S D ++ +WD++ + +S + + I H + D
Sbjct: 616 GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQ--------IFKAHEGVVED 771
Query: 378 FSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAELE 420
+W+ ++ SV +D + IW + + + A +E
Sbjct: 772 VAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSME 900
>gb|AF016845.1|AF016845 Lycopersicon esculentum WD-40 repeat protein (LeMSI1) mRNA,
complete cds
Length = 1716
Score = 568 bits (1465), Expect = e-160
Identities = 267/410 (65%), Positives = 328/410 (79%), Gaps = 2/410 (0%)
Frame = +1
Query: 4 KEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALH 63
++ + +EER+I+EEYKIWKKNTPFLYDLV+THALEWPSLTV+WLPD P GKDY++
Sbjct: 157 EDEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQ 336
Query: 64 WLVLGTHTSD-EQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINH 121
++LGTHTS+ E N+L++A+VQ+P +D + D YD ++ EFGGFG GK++ +INH
Sbjct: 337 KMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRSEFGGFGCANGKVQIIQQINH 516
Query: 122 EGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGL 181
+GEVNRARYMPQNP+IIATKT SA+V VFDY+KHPSKP G CNPDLRLRGH EGYGL
Sbjct: 517 DGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTEGYGL 696
Query: 182 SWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLF 241
SW+ +GHLLS SDD +CLWDI+A PK K ++A IF H VVEDVAWHL HE LF
Sbjct: 697 SWSQFKQGHLLSGSDDSHICLWDINATPKN-KALEAMQIFKVHEGVVEDVAWHLRHEYLF 873
Query: 242 GSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 301
GSV DDQ L +WD R+ + +KP SV AH +EVNCL+FNP++E+++ATGS DKTV L+DL
Sbjct: 874 GSVGDDQYLHVWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDL 1053
Query: 302 RNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGP 361
R + LH+ + HK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGP
Sbjct: 1054RKISTALHTLDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGP 1233
Query: 362 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 411
PELLFIHGGHT+KISDFSWNP E WV+ SV+EDNI+QIWQMAENIY+DE+
Sbjct: 1234PELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDED 1383
>emb|Z81097.1|CEK07A1 Caenorhabditis elegans cosmid K07A1, complete sequence
Length = 39086
Score = 302 bits (773), Expect(2) = e-159
Identities = 139/172 (80%), Positives = 157/172 (90%)
Frame = -3
Query: 251 MIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 310
+IWD R TS P H +DAH+AEVNCL+FNPYSEFILATGSADKTVALWDLRNL++KLHS
Sbjct: 38331 LIWDVR---TSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHS 38161
Query: 311 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGG 370
FESH+DEIFQV WSPHNETILASSGTD+RL+VWDLSKIGE+QSAEDAEDGPPELLFIHGG
Sbjct: 38160 FESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGG 37981
Query: 371 HTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAELEGQ 422
HTAKISDFSWNPNEPWV+CSVSEDNI+Q+WQMA+NIYN+ + + A +E Q
Sbjct: 37980 HTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPADVVERQ 37825
Score = 295 bits (754), Expect(2) = 5e-95
Identities = 154/321 (47%), Positives = 211/321 (64%), Gaps = 37/321 (11%)
Frame = -3
Query: 54 RPEGKDYALHWLVLGTHT-SDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTG 111
+ E D ++H ++ GTHT QNHL++++ I D +FD +++DSE+ EFGG+G +
Sbjct: 37329 KTENSDSSMHRMIHGTHTCGGVQNHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSA 37150
Query: 112 -KIETEIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLR 170
K +TEIKINH GEV+RARYMP NP+IIA++ PS DV +FDYTKHPS+P + + P LR
Sbjct: 37149 AKWDTEIKINHPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPKDT-KFRPQLR 36973
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTV--------------CLWDISAGPKEGKIVD 216
L+GH+ EGYG+SW++ +GHLL+A DD V C WDI+A +
Sbjct: 36972 LKGHEGEGYGMSWSNTREGHLLTAGDDGMVFLTKDIHKYTFFKICHWDINANQTISGQIV 36793
Query: 217 AKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL--------------------MIWDTR 256
++ F GHS+ EDV++H LH +FGSV DD+KL +WD R
Sbjct: 36792 PQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKL*V*IHHTILSRFQNNFHVFRNLWDLR 36613
Query: 257 SNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD 316
SKP + HTAEVNC++FNP+SE+ILATGS DKTVALWD+RN++ K+++ + H D
Sbjct: 36612 Q---SKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKHHND 36442
Query: 317 EIFQVHWSPHNETILASSGTD 337
EIFQV +SPH ET+LASSG+D
Sbjct: 36441 EIFQVSFSPHYETVLASSGSD 36379
Score = 287 bits (734), Expect(2) = e-159
Identities = 138/237 (58%), Positives = 175/237 (73%), Gaps = 18/237 (7%)
Frame = -1
Query: 32 DLVMTHALEWPSLTVQWLPDVSRP-----------------EGKDYALHWLVLGTHTSDE 74
DLVMTHALEWPSL+VQWLPDV++ + D+ +H L+LGTHTSDE
Sbjct: 39086 DLVMTHALEWPSLSVQWLPDVAKVCVLI*FTTFMK*IQII*DNSDHTIHRLILGTHTSDE 38907
Query: 75 QNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMPQ 133
QNHL+++++ +P DD QFD S+YD+E+ E+GGFG+V GK+E +I+INHEGEVNRARYMPQ
Sbjct: 38906 QNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVNRARYMPQ 38727
Query: 134 NPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLS 193
IIATK+P ADV +FDY KH + P + NP +RL+GH KEGYGLSWN N +G +LS
Sbjct: 38726 KSNIIATKSPHADVYIFDYLKHSAVPRDN-TFNPLIRLKGHTKEGYGLSWNPNKEGLILS 38550
Query: 194 ASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 250
ASDD TVC WDI+A + AK +F GH +VVEDVAWH+LH+ +FGSV DD+KL
Sbjct: 38549 ASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKL 38379
Score = 79.3 bits (194), Expect(2) = 5e-95
Identities = 34/62 (54%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = -1
Query: 339 RLNVWDLSKIGE--EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 396
R+ VWD+SKI + SA ++ PPE++FIH GHT K++DFSWNPN PW ICS E N
Sbjct: 36317 RVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNA 36138
Query: 397 MQ 398
+Q
Sbjct: 36137 LQ 36132
Score = 65.1 bits (157), Expect = 1e-08
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Frame = -1
Query: 1 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPE-GK- 58
M+ E E+T S+E++IWKKN P+LYD V+T +EWPSL+VQW+PDV++ GK
Sbjct: 37517 MSEAESCEET------SKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKVRIGKY 37356
Query: 59 DYALHWLVLGTHT 71
D+A + L T
Sbjct: 37355 DFAFFIIFLRQRT 37317
Score = 50.4 bits (119), Expect = 3e-04
Identities = 36/160 (22%), Positives = 66/160 (40%), Gaps = 7/160 (4%)
Frame = -3
Query: 121 HEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 180
H EVN + P + +I+AT + V ++D K H+ E +
Sbjct: 38283 HSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHS---------FESHRDEIFQ 38131
Query: 181 LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 233
+ W+ + + L S+ D + +WD+S ++ DA+ I GH+A + D +W
Sbjct: 38130 VQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSW 37951
Query: 234 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAE 273
+ + SV++D L +W N ++ A E
Sbjct: 37950 NPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPADVVE 37831
Score = 44.3 bits (103), Expect = 0.022
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Frame = -1
Query: 270 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR--------NLKLKLHSFESHKDEIFQV 321
H EVN + P I+AT S V ++D N L + H E + +
Sbjct: 38765 HEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGL 38586
Query: 322 HWSPHNETILASSGTDRRLNVWDLS---KIGEEQSAEDAEDGPPELLFIHGGHTAKISDF 378
W+P+ E ++ S+ D+ + WD++ + E A+D + GH + + D
Sbjct: 38585 SWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKD----------VFKGHESVVEDV 38436
Query: 379 SWNPNEPWVICSVSED 394
+W+ V SV +D
Sbjct: 38435 AWHVLHDGVFGSVGDD 38388
Score = 43.5 bits (101), Expect = 0.037
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Frame = -1
Query: 258 NTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHS---F 311
+ T P + HT E LS+NP E ++ + S D+TV WD+ +N+ +L + F
Sbjct: 38645 DNTFNPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVF 38466
Query: 312 ESHKDEIFQVHWSPHNETILASSGTDRRL 340
+ H+ + V W ++ + S G D++L
Sbjct: 38465 KGHESVVEDVAWHVLHDGVFGSVGDDKKL 38379
Score = 38.5 bits (88), Expect = 1.2
Identities = 24/93 (25%), Positives = 44/93 (46%)
Frame = -1
Query: 313 SHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT 372
+H+ E+ + + P I+A+ + ++D K SA ++ L+ + G HT
Sbjct: 38768 NHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLK----HSAVPRDNTFNPLIRLKG-HT 38604
Query: 373 AKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 405
+ SWNPN+ +I S S+D + W + N
Sbjct: 38603 KEGYGLSWNPNKEGLILSASDDQTVCHWDINAN 38505
>gb|AF440219.1|AF440219 Zea mays cultivar B73 MSI type nucleosome/chromatin assembly factor
C (nfc103) mRNA, complete cds
Length = 1595
Score = 564 bits (1453), Expect = e-159
Identities = 267/412 (64%), Positives = 325/412 (78%), Gaps = 2/412 (0%)
Frame = +1
Query: 2 ASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYA 61
A +E VEER+I+EEYKIWKKNTPFLYDLV+THALEWPSLTVQWLPD + P GKD++
Sbjct: 79 ADEEEFRAEVEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPDRTEPPGKDHS 258
Query: 62 LHWLVLGTHTSD-EQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKI 119
+ ++LGTHTSD E N+L++A+VQ+P DD + D YD + + GGFG+ +GK++ +I
Sbjct: 259 VQKMILGTHTSDNEPNYLMLAQVQLPLDDAEADARHYDDDHADIGGFGAASGKVQIVQQI 438
Query: 120 NHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY 179
NH+GEVNRARYMPQN +IIATKT SA+V VFDY+KHPSKP G CNPDLRL+GH EGY
Sbjct: 439 NHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLKGHNSEGY 618
Query: 180 GLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 239
GLSW+ +GHLLS SDD +CLWDI A + K +DA IF H VVEDVAWHL HE
Sbjct: 619 GLSWSIFKEGHLLSGSDDAQICLWDIKANSRN-KSLDALQIFKHHDGVVEDVAWHLRHEY 795
Query: 240 LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 299
LFGSV DD L+IWD RS +KP SV AH EVNCL+FNP++E+++ATGS DKTV L+
Sbjct: 796 LFGSVGDDYHLLIWDLRSPAPTKPVQSVVAHQGEVNCLAFNPFNEWVVATGSTDKTVKLF 975
Query: 300 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 359
DLR + LH+F+ HK+E+FQV WSP NET+LAS RRL VWDLS+I +EQ+ EDAED
Sbjct: 976 DLRKIDTSLHTFDCHKEEVFQVGWSPKNETVLASCCLGRRLMVWDLSRIDQEQTPEDAED 1155
Query: 360 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 411
GPPEL+FIHGGHT+KISDFSWNP E WV+ SV+EDNI+QIWQMAENIY+DE+
Sbjct: 1156GPPELMFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDED 1311
>emb|AL512427.10|AL512427 Human DNA sequence from clone RP11-325M4 on chromosome 6, complete
sequence [Homo sapiens]
Length = 201657
Score = 561 bits (1446), Expect = e-158
Identities = 291/442 (65%), Positives = 330/442 (73%), Gaps = 20/442 (4%)
Frame = +3
Query: 1 MASKEV-LEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 59
MA KE +DTVEERVI+EEYK WKKNTPFLYDLV+THA+EWPSLT QWLPDV RPEGKD
Sbjct: 55878 MADKEAAFDDTVEERVINEEYKKWKKNTPFLYDLVLTHAVEWPSLTAQWLPDVIRPEGKD 56057
Query: 60 YALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIK 118
+++H LVLGT+T DEQNHLV+ VQ+PNDD QFD S Y++EKGEFGGF SV GKIE EIK
Sbjct: 56058 FSIHQLVLGTYTLDEQNHLVITSVQLPNDDTQFDASHYNTEKGEFGGFYSVRGKIEIEIK 56237
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
INHEGEVN+ RYMPQN II+TKTPS+DVLVFDYTKHPSK DPSGEC+PDL LRGHQKEG
Sbjct: 56238 INHEGEVNKVRYMPQNSCIISTKTPSSDVLVFDYTKHPSKQDPSGECDPDLCLRGHQKEG 56417
Query: 179 YGLSWNSNLKGHLLSAS-DDHTVCLWDISAGPKEG-----------------KIVDAKAI 220
YGLSWN NL GHLLSA C + +E + + ++
Sbjct: 56418 YGLSWNPNLCGHLLSAQMTTPAACGTSVLFQRREKWWM*RPCLQGIQQ**MFPGICSMSL 56597
Query: 221 FTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFN 280
G V+ ++ + +L ++ + A L + RS+ CLSFN
Sbjct: 56598 CLGQLLVIRNL*FGVLVHTVLPNQAIQLTLTLLK*RSHC----------------CLSFN 56729
Query: 281 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRL 340
PYSEFILATGSADKTVAL DLRNLKLKLHSFE HKD+IFQ WSPHNETILASSGT+ RL
Sbjct: 56730 PYSEFILATGSADKTVALRDLRNLKLKLHSFELHKDKIFQFQWSPHNETILASSGTNHRL 56909
Query: 341 NVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 400
NVWDLSKIGE+QS ED EDGPPELLFIHGGHTAKI DFSWNPNEPWVICSV EDNIMQ+W
Sbjct: 56910 NVWDLSKIGEKQSPEDKEDGPPELLFIHGGHTAKIPDFSWNPNEPWVICSVPEDNIMQVW 57089
Query: 401 QMAENIYNDEEPDIAAAELEGQ 422
QMAENIYNDE P+ + + EGQ
Sbjct: 57090 QMAENIYNDEYPE-GSVDPEGQ 57152
Score = 38.5 bits (88), Expect = 1.2
Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 12/156 (7%)
Frame = +3
Query: 130 YMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRG---HQKEGYGLSWNSN 186
+ P + +I+AT + V + D N L+L H+ + + W+ +
Sbjct: 56724 FNPYSEFILATGSADKTVALRDLR------------NLKLKLHSFELHKDKIFQFQWSPH 56867
Query: 187 LKGHLLSASDDHTVCLWDISA-------GPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 239
+ L S+ +H + +WD+S KE + I GH+A + D +W+
Sbjct: 56868 NETILASSGTNHRLNVWDLSKIGEKQSPEDKEDGPPELLFIHGGHTAKIPDFSWNPNEPW 57047
Query: 240 LFGSVADDQKLMIWDTRSN--TTSKPSHSVDAHTAE 273
+ SV +D + +W N P SVD E
Sbjct: 57048 VICSVPEDNIMQVWQMAENIYNDEYPEGSVDPEGQE 57155
>ref|XM_069195.1| Homo sapiens similar to Chromatin assembly factor 1 subunit;
Nucleosome remodeling factor; Nucleosome remodeling
factor - 55kD (LOC135129), mRNA
Length = 1191
Score = 518 bits (1333), Expect = e-145
Identities = 278/427 (65%), Positives = 313/427 (73%), Gaps = 5/427 (1%)
Frame = +1
Query: 1 MASKEV-LEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 59
MA KE +D VEERVI+EEYK WKKNTPFLYDLV+THALEWPSLT QWLPDV+RPEGKD
Sbjct: 1 MADKEAAFDDAVEERVINEEYKKWKKNTPFLYDLVLTHALEWPSLTAQWLPDVTRPEGKD 180
Query: 60 YALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIK 118
+++H LVLGT T DEQNHLV+A VQ+PNDD QFD S Y++EKGEFGGF SV GKIE EI
Sbjct: 181 FSIHQLVLGTCTLDEQNHLVIASVQLPNDDTQFDASHYNTEKGEFGGFYSVRGKIEIEIN 360
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
INHEGEVN+ I+ V V D+R + G
Sbjct: 361 INHEGEVNK---------ILLESAIQTCVSV------------------DIRRKAMGFLG 459
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
+S + L + + + T L + K+VD K IFTGH+AVVEDV+WHLLHE
Sbjct: 460 TQISVGTYLVLQMTTPAACGTAVL-----SQRREKVVDVKIIFTGHTAVVEDVSWHLLHE 624
Query: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLS---FNPYSEFILATGSADKT 295
SLFGSVADDQKLMIWDT SN+ SKPSHSVDAHTAEV F EFILATGSADKT
Sbjct: 625 SLFGSVADDQKLMIWDTCSNSASKPSHSVDAHTAEVTLTLLPLFQSLYEFILATGSADKT 804
Query: 296 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 355
VAL DLRNLKLKLHSFE KD+IFQV WSPHNETILASSGT+ RLNVWDLSKIGE+QS E
Sbjct: 805 VALRDLRNLKLKLHSFELLKDKIFQVQWSPHNETILASSGTNHRLNVWDLSKIGEKQSPE 984
Query: 356 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIA 415
D +D PPELLFIHGGHTAKI DFS NPNEPWVICSV EDNIMQ+WQMAENIYN+E+P+
Sbjct: 985 DKKDRPPELLFIHGGHTAKIPDFSGNPNEPWVICSVPEDNIMQVWQMAENIYNNEDPE-G 1161
Query: 416 AAELEGQ 422
+ + EGQ
Sbjct: 1162SVDPEGQ 1182
>ref|XM_069182.1| Homo sapiens similar to retinoblastoma A associated protein; RbAp48
(H. sapiens) (LOC135106), mRNA
Length = 1191
Score = 518 bits (1333), Expect = e-145
Identities = 278/427 (65%), Positives = 313/427 (73%), Gaps = 5/427 (1%)
Frame = +1
Query: 1 MASKEV-LEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 59
MA KE +D VEERVI+EEYK WKKNTPFLYDLV+THALEWPSLT QWLPDV+RPEGKD
Sbjct: 1 MADKEAAFDDAVEERVINEEYKKWKKNTPFLYDLVLTHALEWPSLTAQWLPDVTRPEGKD 180
Query: 60 YALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIK 118
+++H LVLGT T DEQNHLV+A VQ+PNDD QFD S Y++EKGEFGGF SV GKIE EI
Sbjct: 181 FSIHQLVLGTCTLDEQNHLVIASVQLPNDDTQFDASHYNTEKGEFGGFYSVRGKIEIEIN 360
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
INHEGEVN+ I+ V V D+R + G
Sbjct: 361 INHEGEVNK---------ILLESAIQTCVSV------------------DIRRKAMGFLG 459
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
+S + L + + + T L + K+VD K IFTGH+AVVEDV+WHLLHE
Sbjct: 460 TQISVGTYLVLQMTTPAACGTAVL-----SQRREKVVDVKIIFTGHTAVVEDVSWHLLHE 624
Query: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLS---FNPYSEFILATGSADKT 295
SLFGSVADDQKLMIWDT SN+ SKPSHSVDAHTAEV F EFILATGSADKT
Sbjct: 625 SLFGSVADDQKLMIWDTCSNSASKPSHSVDAHTAEVTLTLLPLFQSLYEFILATGSADKT 804
Query: 296 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 355
VAL DLRNLKLKLHSFE KD+IFQV WSPHNETILASSGT+ RLNVWDLSKIGE+QS E
Sbjct: 805 VALRDLRNLKLKLHSFELLKDKIFQVQWSPHNETILASSGTNHRLNVWDLSKIGEKQSPE 984
Query: 356 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIA 415
D +D PPELLFIHGGHTAKI DFS NPNEPWVICSV EDNIMQ+WQMAENIYN+E+P+
Sbjct: 985 DKKDRPPELLFIHGGHTAKIPDFSGNPNEPWVICSVPEDNIMQVWQMAENIYNNEDPE-G 1161
Query: 416 AAELEGQ 422
+ + EGQ
Sbjct: 1162SVDPEGQ 1182
>ref|NM_060150.1| retinablastoma-binding protein RBAP46 like
Length = 1239
Score = 459 bits (1182), Expect = e-127
Identities = 217/416 (52%), Positives = 304/416 (72%), Gaps = 5/416 (1%)
Frame = +1
Query: 1 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY 60
M+ E E+T S+E++IWKKN P+LYD V+T +EWPSL+VQW+PDV++ E D
Sbjct: 1 MSEAESCEET------SKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDS 162
Query: 61 ALHWLVLGTHT-SDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTG-KIETEI 117
++H ++ GTHT QNHL++++ I D +FD +++DSE+ EFGG+G + K +TEI
Sbjct: 163 SMHRMIHGTHTCGGVQNHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSAAKWDTEI 342
Query: 118 KINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKE 177
KINH GEV+RARYMP NP+IIA++ PS DV +FDYTKHPS+P + + P LRL+GH+ E
Sbjct: 343 KINHPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPKDT-KFRPQLRLKGHEGE 519
Query: 178 GYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLH 237
GYG+SW++ +GHLL+A DD +C WDI+A + ++ F GHS+ EDV++H LH
Sbjct: 520 GYGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALH 699
Query: 238 ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 297
+FGSV DD+KL +WD R SKP + HTAEVNC++FNP+SE+ILATGS DKTVA
Sbjct: 700 NFVFGSVGDDRKLNLWDLRQ---SKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVA 870
Query: 298 LWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE--EQSAE 355
LWD+RN++ K+++ + H DEIFQV +SPH ET+LASSG+D R+ VWD+SKI + SA
Sbjct: 871 LWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSSSSAA 1050
Query: 356 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 411
++ PPE++FIH GHT K++DFSWNPN PW ICS E N +Q+W+++ ++ + E+
Sbjct: 1051SSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNALQVWEVSNSLVSSEK 1218
Score = 44.3 bits (103), Expect = 0.022
Identities = 37/163 (22%), Positives = 72/163 (43%), Gaps = 13/163 (7%)
Frame = +1
Query: 164 ECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTG 223
+ P L GH E +++N + L + S D TV LWD+ K K+ K
Sbjct: 757 QSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRK--KMYTLKH---- 918
Query: 224 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTR-----SNTTSKPSHSVD--------AH 270
H+ + V++ +E++ S D ++++WD S++++ S SV H
Sbjct: 919 HNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGH 1098
Query: 271 TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES 313
T +V S+NP + + + + +W++ N + +E+
Sbjct: 1099TGKVADFSWNPNRPWTICSSDEFNALQVWEVSNSLVSSEKWET 1227
>gb|AF297468.1|AF297468 Schistosoma mansoni strain NMRI chromatin assembly factor 1 small
subunit-like protein (RBAP48) mRNA, complete cds
Length = 1036
Score = 442 bits (1136), Expect = e-122
Identities = 203/295 (68%), Positives = 243/295 (81%), Gaps = 1/295 (0%)
Frame = +2
Query: 8 EDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVL 67
ED VEERVI+EEYKIWK+NTPFLYD++M+H LEWPSLT QWLP V R G+DY++H L+L
Sbjct: 110 EDIVEERVINEEYKIWKRNTPFLYDMLMSHCLEWPSLTAQWLPSVERT-GRDYSVHRLIL 286
Query: 68 GTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVN 126
GTHTSDEQNHL++ V +PND +FD S YDSE+G+FGGF +GK+E +KINHEGEVN
Sbjct: 287 GTHTSDEQNHLLIVTVHLPNDQAEFDASAYDSERGDFGGFYFPSGKLEISMKINHEGEVN 466
Query: 127 RARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSN 186
RAR+MPQNP IIATKTPS DVL+F+Y +HP K C PDLRL+GHQKEGYGLSWN +
Sbjct: 467 RARFMPQNPDIIATKTPSGDVLIFNYPRHPPKTPSDRGCQPDLRLKGHQKEGYGLSWNVS 646
Query: 187 LKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVAD 246
L GHLLSASDD T+CLWD++A P +G +DA AIFTGH +VVEDV+WHL H +FGSVAD
Sbjct: 647 LNGHLLSASDDQTICLWDVNAAPLDGCDLDAMAIFTGHHSVVEDVSWHLFHGHIFGSVAD 826
Query: 247 DQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 301
D KLM+WDTRS+ +KP H VDAHTAEVNCL+FNP+SEFI+ATGSADK + + L
Sbjct: 827 DNKLMVWDTRSSNRTKPQHQVDAHTAEVNCLAFNPFSEFIIATGSADKVIKYFTL 991
Score = 50.1 bits (118), Expect = 4e-04
Identities = 36/159 (22%), Positives = 63/159 (38%), Gaps = 6/159 (3%)
Frame = +2
Query: 255 TRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------L 308
T S+ +P + H E LS+N L + S D+T+ LWD+ L +
Sbjct: 563 TPSDRGCQPDLRLKGHQKEGYGLSWNVSLNGHLLSASDDQTICLWDVNAAPLDGCDLDAM 742
Query: 309 HSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIH 368
F H + V W + I S D +L VWD + +
Sbjct: 743 AIFTGHHSVVEDVSWHLFHGHIFGSVADDNKLMVWDTRSSNRTKPQHQVD---------- 892
Query: 369 GGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 407
HTA+++ ++NP ++I + S D +++ + + Y
Sbjct: 893 -AHTAEVNCLAFNPFSEFIIATGSADKVIKYFTLVSFFY 1006
Score = 43.9 bits (102), Expect = 0.028
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 9/140 (6%)
Frame = +2
Query: 270 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 320
H EVN F P + I+AT + V +++ K S + H+ E +
Sbjct: 449 HEGEVNRARFMPQNPDIIATKTPSGDVLIFNYPRHPPKTPSDRGCQPDLRLKGHQKEGYG 628
Query: 321 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 380
+ W+ L S+ D+ + +WD++ + DA + I GH + + D SW
Sbjct: 629 LSWNVSLNGHLLSASDDQTICLWDVNAAPLDGCDLDA-------MAIFTGHHSVVEDVSW 787
Query: 381 NPNEPWVICSVSEDNIMQIW 400
+ + SV++DN + +W
Sbjct: 788 HLFHGHIFGSVADDNKLMVW 847
>gb|AY056814.1| Arabidopsis thaliana At2g16780/T24I21.19 mRNA, complete cds
Length = 1463
Score = 440 bits (1132), Expect = e-121
Identities = 220/420 (52%), Positives = 291/420 (68%), Gaps = 11/420 (2%)
Frame = +3
Query: 3 SKEVLEDTVEERV----ISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGK 58
++E++ D +E + E++ +WKKNTPFLYDL+++H LEWPSLTV W+P P
Sbjct: 39 AREIMADEGKEETGMGQVEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVA 218
Query: 59 D--YALHWLVLGTHTSDE-QNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGS--VTGKI 113
D + +H L+LGTHTS Q+ L+VA V P + +E G GG K+
Sbjct: 219 DSYFGVHKLILGTHTSGSAQDFLMVADVVTPTPN--------AEPG-IGGANQDPFIPKV 371
Query: 114 ETEIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRG 173
E +I +GEVNRAR MPQ P ++ KT +V +FDY KH +K S EC+PDLRL G
Sbjct: 372 EIRQRIRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTS-ECDPDLRLVG 548
Query: 174 HQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAW 233
H KEGYGLSW+ +G+LLS S D +CLWD+SA P++ K+++A ++ GH + + DV+W
Sbjct: 549 HDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQD-KVLNAMFVYEGHESAIADVSW 725
Query: 234 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 293
H+ +E+LFGS +D +L+IWDTR+N + H V H EVN LSFNP++E++LAT S+D
Sbjct: 726 HMKNENLFGSAGEDGRLVIWDTRTN---QMQHQVKVHEREVNYLSFNPFNEWVLATASSD 896
Query: 294 KTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ- 352
TVAL+DLR L LH SH+ E+FQV W P++ET+LASSG DRRL VWDL+++GEEQ
Sbjct: 897 STVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQL 1076
Query: 353 -SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 411
DAEDGPPELLF HGGH AKISDF+WN NEPWVI SV+EDN +Q+WQMAE+IY DEE
Sbjct: 1077EIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAESIYRDEE 1256
>ref|NM_127230.1| putative WD-40 repeat protein, MSI2
Length = 1427
Score = 440 bits (1132), Expect = e-121
Identities = 220/420 (52%), Positives = 291/420 (68%), Gaps = 11/420 (2%)
Frame = +3
Query: 3 SKEVLEDTVEERV----ISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGK 58
++E++ D +E + E++ +WKKNTPFLYDL+++H LEWPSLTV W+P P
Sbjct: 18 AREIMADEGKEETGMGQVEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVA 197
Query: 59 D--YALHWLVLGTHTSDE-QNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGS--VTGKI 113
D + +H L+LGTHTS Q+ L+VA V P + +E G GG K+
Sbjct: 198 DSYFGVHKLILGTHTSGSAQDFLMVADVVTPTPN--------AEPG-IGGANQDPFIPKV 350
Query: 114 ETEIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRG 173
E +I +GEVNRAR MPQ P ++ KT +V +FDY KH +K S EC+PDLRL G
Sbjct: 351 EIRQRIRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTS-ECDPDLRLVG 527
Query: 174 HQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAW 233
H KEGYGLSW+ +G+LLS S D +CLWD+SA P++ K+++A ++ GH + + DV+W
Sbjct: 528 HDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQD-KVLNAMFVYEGHESAIADVSW 704
Query: 234 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 293
H+ +E+LFGS +D +L+IWDTR+N + H V H EVN LSFNP++E++LAT S+D
Sbjct: 705 HMKNENLFGSAGEDGRLVIWDTRTN---QMQHQVKVHEREVNYLSFNPFNEWVLATASSD 875
Query: 294 KTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ- 352
TVAL+DLR L LH SH+ E+FQV W P++ET+LASSG DRRL VWDL+++GEEQ
Sbjct: 876 STVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQL 1055
Query: 353 -SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 411
DAEDGPPELLF HGGH AKISDF+WN NEPWVI SV+EDN +Q+WQMAE+IY DEE
Sbjct: 1056EIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAESIYRDEE 1235
>gb|AF016847.1|AF016847 Arabidopsis thaliana WD-40 repeat protein (MSI2) mRNA, complete cds
Length = 1425
Score = 438 bits (1127), Expect = e-121
Identities = 217/403 (53%), Positives = 283/403 (69%), Gaps = 7/403 (1%)
Frame = +3
Query: 16 ISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD--YALHWLVLGTHTSD 73
+ E++ +WKKNTPFLYDL+++H LEWPSLTV W+P P D + +H L+LGTHTS
Sbjct: 45 VEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGVHKLILGTHTSG 224
Query: 74 E-QNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGS--VTGKIETEIKINHEGEVNRARY 130
Q+ L+VA V P + +E G GG K+E +I +GEVNRAR
Sbjct: 225 SAQDFLMVADVVTPTPN--------AEPG-IGGANQDPFIPKVEIRQRIRVDGEVNRARC 377
Query: 131 MPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGH 190
MPQ P ++ KT +V +FDY KH +K S EC+PDLRL GH KEGYGLSW+ +G+
Sbjct: 378 MPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTS-ECDPDLRLVGHDKEGYGLSWSPFKEGY 554
Query: 191 LLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 250
LLS S D +CLWD+SA P++ K+++A ++ GH + + DV+WH+ +E+LFGS +D +L
Sbjct: 555 LLSGSQDQKICLWDVSATPQD-KVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRL 731
Query: 251 MIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 310
+IWDTR+N + H V H EVN LSFNP++E++LAT S+D TVAL+DLR L LH
Sbjct: 732 VIWDTRTN---QMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHV 902
Query: 311 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ--SAEDAEDGPPELLFIH 368
SH+ E+FQV W P++ET+LASSG DRRL VWDL+++GEEQ DAEDGPPELLF H
Sbjct: 903 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSH 1082
Query: 369 GGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 411
GGH AKISDF+WN NEPWVI SV+EDN +Q+WQMAE+IY DEE
Sbjct: 1083GGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAESIYRDEE 1211
>ref|NM_119671.1| WD-40 repeat protein (MSI3)
Length = 1453
Score = 434 bits (1117), Expect = e-120
Identities = 216/420 (51%), Positives = 297/420 (70%), Gaps = 7/420 (1%)
Frame = +1
Query: 1 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD- 59
MA++E ++ ++V EE+ IWK+NTPFLYDL+++H LEWPSLT+ W+P P KD
Sbjct: 4 MAAEEGKDEAGLDQV-EEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDP 180
Query: 60 -YALHWLVLGTHTSD-EQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGS--VTGKIET 115
+A+H L+LGTHTS Q+ L+VA V IP D +E G GG + K+E
Sbjct: 181 YFAVHKLILGTHTSGGAQDFLMVADVVIPTPD--------AEPG-LGGRDQEPIVPKVEI 333
Query: 116 EIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQ 175
+ KI +GEVNRAR MPQ P ++ KT ++V +FDY + KP S EC+PDLRL GH+
Sbjct: 334 KQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRLMGHE 510
Query: 176 KEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHL 235
+EGYGL+W+S +G+LLS S D +CLWD+SA + K+++ ++ GH +++EDVAWH+
Sbjct: 511 QEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATD-KVLNPMHVYEGHQSIIEDVAWHM 687
Query: 236 LHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 295
+E++FGS DD +L+IWD R+N + H V H E+N LSFNP++E++LAT S+D T
Sbjct: 688 KNENIFGSAGDDCQLVIWDLRTN---QMQHQVKVHEREINYLSFNPFNEWVLATASSDST 858
Query: 296 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ--S 353
VAL+DLR L LH H+ E+FQV W P++ET+LASSG DRRL VWD++++G+EQ
Sbjct: 859 VALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEI 1038
Query: 354 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPD 413
DAEDGPPELLF HGGH AKISDF+WN +EPWVI SV+EDN +Q+WQMAE+IY +++ D
Sbjct: 1039ELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDED 1218
>gb|AF016848.1|AF016848 Arabidopsis thaliana WD-40 repeat protein (MSI3) mRNA, complete cds
Length = 1461
Score = 432 bits (1110), Expect = e-119
Identities = 214/420 (50%), Positives = 297/420 (69%), Gaps = 7/420 (1%)
Frame = +1
Query: 1 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD- 59
MA++E ++ ++V EE+ IWK+NTPFLYDL+++H LEWPSLT+ W+P P KD
Sbjct: 4 MAAEEGKDEAGLDQV-EEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDP 180
Query: 60 -YALHWLVLGTHTSD-EQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGS--VTGKIET 115
+A+H L+LGTHTS Q+ L+VA V IP D +E G GG + K+E
Sbjct: 181 YFAVHKLILGTHTSGGAQDFLMVADVVIPTPD--------AEPG-LGGRDQEPIVPKVEI 333
Query: 116 EIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQ 175
+ KI +GEVNRAR MPQ P ++ KT ++V +FDY + KP S EC+PDLRL GH+
Sbjct: 334 KQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRLMGHE 510
Query: 176 KEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHL 235
+EGYGL+W+S +G+LLS S D +CLWD+SA + K+++ ++ GH +++E++AWH+
Sbjct: 511 QEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATD-KVLNPMHVYEGHQSIIEELAWHM 687
Query: 236 LHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 295
+E++FGS DD +L+IWD R+N + H V H E+N LSFNP++E++LAT S+D T
Sbjct: 688 KNENIFGSAGDDCQLVIWDLRTN---QMQHQVKVHEREINYLSFNPFNEWVLATASSDST 858
Query: 296 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ--S 353
VAL+DLR L LH H+ E+FQV W P++ET+LASSG DRRL VWD++++G+EQ
Sbjct: 859 VALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEI 1038
Query: 354 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPD 413
DAEDGPPELLF HGGH AKISDF+WN +EPWVI SV+EDN +Q+WQMAE+IY +++ D
Sbjct: 1039ELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDED 1218
>emb|AL031324.2|SPCC1672 S.pombe chromosome III cosmid c1672
Length = 35999
Score = 353 bits (906), Expect(2) = e-110
Identities = 178/371 (47%), Positives = 244/371 (64%), Gaps = 4/371 (1%)
Frame = +1
Query: 54 RPEGKDYALHWLVLGTHTS-DEQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGK 112
R G DY++ L+LGTHTS ++QN+L +A VQ+PN D+ T S GS T
Sbjct: 25996 RIPGTDYSIQRLILGTHTSGNDQNYLQIASVQLPNFDEDTTEFTPSTIRRAQATGSYT-- 26169
Query: 113 IETEIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLR 172
IE KI H+G+VNRARYMPQ P IIAT + +FD T H + +GE P L+
Sbjct: 26170 IEISQKIPHDGDVNRARYMPQKPEIIATMGEGGNAYIFDTTCHDALT--TGEALPQAVLK 26343
Query: 173 GHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDI---SAGPKEGKIVDAKAIFTGHSAVVE 229
GH EG+GL WN NL G+L + ++D +CLWD+ S E K++ A + H+ +V
Sbjct: 26344 GHTAEGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIVN 26523
Query: 230 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 289
DV +H HE+L SV+DD L I DTR N + + AH+ +N ++ NP+++++LAT
Sbjct: 26524 DVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLAT 26703
Query: 290 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 349
SADKTVALWDLRN +LH+ E H+DE++ + WSPH+E ILASS TDRR+ +WDL KIG
Sbjct: 26704 ASADKTVALWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKIG 26883
Query: 350 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYND 409
EEQ+ EDAEDG PELLF+HGGHT +IS+FSW PNE WV+ S+++DNI+QIW + I+
Sbjct: 26884 EEQTPEDAEDGSPELLFMHGGHTNRISEFSWCPNERWVVGSLADDNILQIWSPSRVIWGR 27063
Query: 410 EEPDIAAAELE 420
+ ++ +LE
Sbjct: 27064 DHVQVSPRDLE 27096
Score = 72.8 bits (177), Expect(2) = e-110
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +3
Query: 15 VISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPD 51
++ EYK+WK+N PFLYDLV+THALEWPSLT+QWLPD
Sbjct: 25791 ILVSEYKLWKQNVPFLYDLVITHALEWPSLTIQWLPD 25901
>emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
Length = 226576
Score = 315 bits (808), Expect = 4e-84
Identities = 160/396 (40%), Positives = 233/396 (58%), Gaps = 2/396 (0%)
Frame = -2
Query: 11 VEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLGTH 70
+E+++++EEYKIWKKN P+LYDL+ +H LEWPSL+VQW PDV R E L+L TH
Sbjct: 96696 LEQKIVNEEYKIWKKNVPYLYDLMFSHTLEWPSLSVQWFPDVRRDEEAGRTTQRLLLSTH 96517
Query: 71 TS-DEQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRAR 129
TS E+ ++++A+V+ P D+FD S + G+ +++ +I+ E NR R
Sbjct: 96516 TSGSEEEYILIAKVEFP--DEFDESLNEEVGGDM--------RLKIIQRISIMDEANRVR 96367
Query: 130 YMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKG 189
Y P ++A ++ D+ V+DYTKH S PD+ LRGH G+GLSWN G
Sbjct: 96366 YNPSACNVLAVRSDLPDIHVYDYTKHLSHEKIP---RPDMVLRGHSAGGFGLSWNHLNPG 96196
Query: 190 HLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQK 249
L + VC++D+S +E + + H V D A+ + L S D
Sbjct: 96195 ELAGCGEGGEVCVFDVS---QESSSISPTVVLRRHETAVNDCAFSFFDKKLLSSAGDGGM 96025
Query: 250 LMIWDTRSNTTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL 308
+++WDTRS H+++ AHT+++ + F+P ++AT S D +V +WD R+L L
Sbjct: 96024 VVLWDTRSEDCI---HAIEEAHTSDILSVRFSPLDGNVIATSSCDGSVKVWDRRSLSQPL 95854
Query: 309 HSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIH 368
H H ++ V WSPHN+ +LAS TDRR+ VWDL + G E E +GPPE+ F+H
Sbjct: 95853 HILLGHSKDVVSVEWSPHNDKVLASGSTDRRVIVWDLGQAGAEVPEEYKAEGPPEMKFLH 95674
Query: 369 GGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 404
GGHT+ + D SWNP EP+ I SVSEDNI+QIWQM +
Sbjct: 95673 GGHTSTVCDISWNPAEPFEIASVSEDNILQIWQMPQ 95566
>dbj|AB019228.1|AB019228 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCK7
Length = 87090
Score = 166 bits (420), Expect(2) = 3e-79
Identities = 99/213 (46%), Positives = 119/213 (55%), Gaps = 55/213 (25%)
Frame = +3
Query: 118 KINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKE 177
+INH+GEVNRARYMPQNP+IIATKT +A+V VFDY+KHPSKP G CNPDL+LRGH E
Sbjct: 29703 QINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSE 29882
Query: 178 GYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGH------------S 225
GYGLSW+ +GHLLS SDD +CLWDI+A PK K +DA+ IF S
Sbjct: 29883 GYGLSWSKFKQGHLLSGSDDAQICLWDINATPK-NKSLDAQQIFKVMLWISIRF*FCFVS 30059
Query: 226 AVVEDVA------------------WHL------------LHESLFGSVA---------- 245
+ E +A W L HE + VA
Sbjct: 30060 SRKEGIAPT*RNQLHL*KLIDRYSGWFLCFPC**LFSELKAHEGVVEDVAWHLRHEYLFG 30239
Query: 246 ---DDQKLMIWDTRSNTTSKPSHSVDAHTAEVN 275
DDQ L+IWD RS + SKP SV AH+ EV+
Sbjct: 30240 SVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVS 30338
Score = 155 bits (392), Expect(2) = 3e-79
Identities = 71/120 (59%), Positives = 95/120 (79%), Gaps = 2/120 (1%)
Frame = +2
Query: 4 KEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALH 63
+E + +EER+I+EEYKIWKKNTPFLYDLV+THALEWPSLTV+WLPD P GKDY++
Sbjct: 29252 EEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQ 29431
Query: 64 WLVLGTHTSD-EQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINH 121
++LGTHTS+ E N+L++A+VQ+P DD + + QYD ++ EFGGFG TGK+ I ++H
Sbjct: 29432 KMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVRFFIFVSH 29611
Score = 119 bits (298), Expect(3) = 5e-47
Identities = 53/65 (81%), Positives = 60/65 (91%)
Frame = +1
Query: 347 KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 406
+I EEQ+ EDAEDGPPELLFIHGGHT+KISDFSWNP E WVI SV+EDNI+QIWQMAENI
Sbjct: 30892 RIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 31071
Query: 407 YNDEE 411
Y+DE+
Sbjct: 31072 YHDED 31086
Score = 65.5 bits (158), Expect(3) = 5e-47
Identities = 28/49 (57%), Positives = 40/49 (81%)
Frame = +2
Query: 274 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVH 322
VNCL+FNP++E+++ATGS DKTV L+DLR L LH+F+SHK E + ++
Sbjct: 30470 VNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHK*E*YAIN 30616
Score = 50.1 bits (118), Expect(3) = 5e-47
Identities = 22/35 (62%), Positives = 27/35 (76%)
Frame = +3
Query: 315 KDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 349
++E+FQV W+P NETILAS RRL VWDLS+ G
Sbjct: 30705 REEVFQVGWNPKNETILASCCLGRRLMVWDLSRFG 30809
Score = 37.0 bits (84), Expect = 3.5
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Frame = +3
Query: 270 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHSFESHKDE 317
H EVN + P + FI+AT + + V ++D N LKL H E
Sbjct: 29712 HDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRG---HSSE 29882
Query: 318 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 355
+ + WS + L S D ++ +WD++ + +S +
Sbjct: 29883 GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLD 29996
>emb|Z97210.2|SPAC29A4 S.pombe chromosome I cosmid c29A4
Length = 44082
Score = 248 bits (634), Expect(2) = 5e-76
Identities = 141/355 (39%), Positives = 202/355 (56%), Gaps = 3/355 (0%)
Frame = -3
Query: 60 YALHWLVLGTHTSDEQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKI 119
Y + LG + L VA +Q+P +Q T + +G G S ++
Sbjct: 8563 YTEQKMFLGVRADVGKYLLAVASIQLPYLNQ--TVPPTTMEGASAGDESSL-RVNISNLY 8393
Query: 120 NHEGEVNRARYMPQNPYIIATK-TPSADVLVFDYTKHPSKPDPS-GECNPDLRLRGHQKE 177
+H V A+ MPQ+ +AT DVLVFD S S P RL H +
Sbjct: 8392 SHPESVCSAKLMPQDDSCVATVGNYHNDVLVFDKESFESYSSASESPLKPKYRLTKHTQP 8213
Query: 178 GYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLH 237
+ WN KG L+S S D T+ WD++A + K + H V DV +H H
Sbjct: 8212 CTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFHYKH 8033
Query: 238 ESLFGSVADDQKLMIWDTRS-NTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTV 296
+ L SV+ DQ L + D R + ++KP+ SV AH+ ++ ++FNP+++FILAT S DKT+
Sbjct: 8032 QDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATCSTDKTI 7853
Query: 297 ALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 356
ALWDLRNL +LH+ E H+D + ++ +SPH E ILAS+ DRR VWDLS+IGE+Q AE+
Sbjct: 7852 ALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLSRIGEDQPAEE 7673
Query: 357 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 411
A+DGPPELLF+HGGHT+ D W PN W + + +EDNI+QIW + +I+ +E+
Sbjct: 7672 AQDGPPELLFMHGGHTSCTIDMDWCPNYNWTMATAAEDNILQIWTPSRSIWGNEQ 7508
Score = 62.4 bits (150), Expect(2) = 5e-76
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = -1
Query: 19 EYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPD 51
EYKIWKKN+PFLYDL++T ALEWP +++QW P+
Sbjct: 8763 EYKIWKKNSPFLYDLIITRALEWPCMSLQWYPE 8665
>gb|U18795.1|SCE9669 Saccharomyces cerevisiae chromosome V cosmids 9669, 8334, 8199, and
lambda clone 1160
Length = 50849
Score = 277 bits (709), Expect = 1e-72
Identities = 145/405 (35%), Positives = 225/405 (54%), Gaps = 2/405 (0%)
Frame = +3
Query: 4 KEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALH 63
+ +E+ + + EEY +WK N P +YD V L WPSLTVQWLP + +
Sbjct: 44682 QSTMENQEKPLSVDEEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLPTPVQELDGGFIKQ 44861
Query: 64 WLVLGTHTS-DEQNHLVVARVQIPNDDQFDTSQYDSEKGEF-GGFGSVTGKIETEIKINH 121
L++GTHTS +E+N+L A + +P + + + E+ + I K H
Sbjct: 44862 ELIIGTHTSGEEENYLKFAEINLPKEILSNEDPQEEAGEEYQSSLPAPRSNIRITAKYEH 45041
Query: 122 EGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGL 181
E E+ RARYMPQ+P I+AT V ++ ++ L+ H+ GY L
Sbjct: 45042 EEEITRARYMPQDPNIVATINGQGTVFLYSRSEGLQST-----------LKFHKDNGYAL 45188
Query: 182 SWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLF 241
S+++ +KG LLS SDDHTV LW++ +G K V + HS ++ D WH ++ LF
Sbjct: 45189 SFSTLVKGRLLSGSDDHTVALWEVGSGGDPTKPV--RTWNDLHSDIINDNKWHNFNKDLF 45362
Query: 242 GSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 301
G+V++D L I D R+N T+ + N L+F+ +S +LA D V L+DL
Sbjct: 45363 GTVSEDSLLKINDVRANNTTIDTVKCPQ---PFNTLAFSHHSSNLLAAAGMDSYVYLYDL 45533
Query: 302 RNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGP 361
RN+K LH H+D + + +S H + ++ SSG+D RL +WDL +IG EQ+ +DAEDG
Sbjct: 45534 RNMKEPLHHMSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGV 45713
Query: 362 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 406
PEL+ +H GH + ++DF NP PW++ S E+NI+Q+W+ + ++
Sbjct: 45714 PELIMVHAGHRSSVNDFDLNPQIPWLVASAEEENILQVWKCSHSL 45848
>gb|AF384037.1|AF384037 Zea mays nucleosome/chromatin assembly factor C (nfc102) mRNA,
complete cds
Length = 1808
Score = 231 bits (589), Expect = 1e-58
Identities = 157/453 (34%), Positives = 222/453 (48%), Gaps = 39/453 (8%)
Frame = +3
Query: 5 EVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHW 64
E+ E + + E Y WK P LYD H L WPSL+ +W P + K+ +
Sbjct: 216 EMKERSGSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCRWGPQFEKATYKNRQRLY 395
Query: 65 LVLGTHTSDEQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGE 124
L T S N LV+A ++ + +++ S+ E V K +T I H GE
Sbjct: 396 LSEQTDGS-VPNTLVIANCEVVKP-RVAAAEHISQFNEEARSPFVK-KYKT---IVHPGE 557
Query: 125 VNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSG--ECNPDLRLRGHQKEGYGLS 182
VNR R +PQN IIAT T S DVL++D P++ G E PDL L GH++
Sbjct: 558 VNRIRELPQNSKIIATHTDSPDVLIWDVEAQPNRHAVLGASESRPDLILTGHKENAEFAL 737
Query: 183 WNSNLKGHLLSASDDHTVCLWDI------------------------SAGPKEGKIVDAK 218
+ ++LS D +V LW I +A KE VD +
Sbjct: 738 AMCPAEPYVLSGGKDKSVVLWSIQDHISALGDSSSSPGASGSKQSIKTANEKESPKVDPR 917
Query: 219 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-AHTAEVNCL 277
IF GH + VEDV + F SV DD L++WD R+ T P+ V+ AH+ +V+C+
Sbjct: 918 GIFHGHDSTVEDVQFCPSSAQEFCSVGDDACLILWDARTGTA--PAVKVEKAHSGDVHCV 1091
Query: 278 SFNPYSEFILATGSADKTVALWDLRNLKL-----KLHSFESHKDEIFQVHWSPHNETILA 332
+NP + TGSAD +V +WD RNL +H FE HK + V WSP ++
Sbjct: 1092DWNPLDVNYILTGSADNSVRMWDRRNLGSGGAGSPIHKFEGHKAAVLCVQWSPDRASVFG 1271
Query: 333 SSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 392
SS D LNVWD K+G+++++ + P L F H GH KI DF WN ++PW I SVS
Sbjct: 1272SSAEDGFLNVWDHEKVGKKKNS----NVPAGLFFQHAGHRDKIVDFHWNSSDPWTIVSVS 1439
Query: 393 ED-------NIMQIWQMAENIYNDEEPDIAAAE 418
+D +QIW+M++ IY E+ +A E
Sbjct: 1440DDGESTGGGGTLQIWRMSDLIYRPEDEVLAELE 1538
>gb|AF250047.1|AF250047 Zea mays WD-repeat protein RBAP1 (rbap1) mRNA, complete cds
Length = 1777
Score = 230 bits (586), Expect = 2e-58
Identities = 157/453 (34%), Positives = 221/453 (48%), Gaps = 39/453 (8%)
Frame = +1
Query: 5 EVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHW 64
E+ E + E Y WK P LYD H L WPSL+ +W P + K+ +
Sbjct: 304 EMKERGGSSAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCRWGPQFEKATYKNRQRLY 483
Query: 65 LVLGTHTSDEQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGE 124
L T S N LV+A ++ + +++ S+ E V K +T I H GE
Sbjct: 484 LSEQTDGS-VPNTLVIANCEVVKP-RVAAAEHISQFNEEARSPFVK-KYKT---IVHPGE 645
Query: 125 VNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSG--ECNPDLRLRGHQKEGYGLS 182
VNR R +PQN IIAT T S DVL++D P++ G E PDL L GH++
Sbjct: 646 VNRIRELPQNSKIIATHTDSPDVLIWDVEAQPNRHAVLGASESRPDLILTGHKENAEFAL 825
Query: 183 WNSNLKGHLLSASDDHTVCLWDI------------------------SAGPKEGKIVDAK 218
+ ++LS D +V LW I +A KE VD +
Sbjct: 826 AMCPAEPYVLSGGKDKSVVLWSIQDHISALGDSSSSPGASGSKQSIKTANEKESPKVDPR 1005
Query: 219 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-AHTAEVNCL 277
IF GH + VEDV + F SV DD L++WD R+ T P+ V+ AH+ +V+C+
Sbjct: 1006GIFHGHDSTVEDVQFCPSSAQEFCSVGDDACLILWDARTGTA--PAVKVEKAHSGDVHCV 1179
Query: 278 SFNPYSEFILATGSADKTVALWDLRNLKL-----KLHSFESHKDEIFQVHWSPHNETILA 332
+NP + TGSAD +V +WD RNL +H FE HK + V WSP ++
Sbjct: 1180DWNPLDVNYILTGSADNSVRMWDRRNLGSGGAGSPIHKFEGHKAAVLCVQWSPDRASVFG 1359
Query: 333 SSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 392
SS D LNVWD K+G+++++ + P L F H GH KI DF WN ++PW I SVS
Sbjct: 1360SSAEDGFLNVWDHEKVGKKKNS----NVPAGLFFQHAGHRDKIVDFHWNSSDPWTIVSVS 1527
Query: 393 ED-------NIMQIWQMAENIYNDEEPDIAAAE 418
+D +QIW+M++ IY E+ +A E
Sbjct: 1528DDGESTGGGGTLQIWRMSDLIYRPEDEVLAELE 1626
>gb|AY057655.1| Arabidopsis thaliana At2g19520/F3P11.12 mRNA, complete cds
Length = 1810
Score = 226 bits (577), Expect = 2e-57
Identities = 153/453 (33%), Positives = 222/453 (48%), Gaps = 38/453 (8%)
Frame = +1
Query: 4 KEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALH 63
KE + T + + E+Y WK P LYD + H L WPSL+ +W P + + K+
Sbjct: 202 KESGKKTQQSPSVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRL 381
Query: 64 WLVLGTHTSDEQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEG 123
+L T S N LV+A ++ + +++ S+ E V K +T I H G
Sbjct: 382 YLSEQTDGS-VPNTLVIANCEVVKP-RVAAAEHISQFNEEARSPFVK-KYKTII---HPG 543
Query: 124 EVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEGYGL 181
EVNR R +PQN I+AT T S DVL++D P++ G N PDL L GHQ
Sbjct: 544 EVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFA 723
Query: 182 SWNSNLKGHLLSASDDHTVCLWDI------------SAGP-----------KEGKIVDAK 218
+ +LS D +V LW I S+G E V +
Sbjct: 724 LAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQTGEGTDKNESPTVGPR 903
Query: 219 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-AHTAEVNCL 277
++ GH VEDVA+ F SV DD L++WD R+ T P V+ AH A+++C+
Sbjct: 904 GVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTN--PVTKVEKAHDADLHCV 1077
Query: 278 SFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVHWSPHNETILA 332
+NP+ + ++ TGSAD TV L+D R L ++ FE HK + V WSP ++
Sbjct: 1078DWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFG 1257
Query: 333 SSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 392
SS D LN+WD ++ ++ ++ A P L F H GH K+ DF WN ++PW I SVS
Sbjct: 1258SSAEDGLLNIWDYDRVSKK--SDRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVS 1431
Query: 393 ED-------NIMQIWQMAENIYNDEEPDIAAAE 418
+D +QIW+M++ IY EE +A E
Sbjct: 1432DDCETTGGGGTLQIWRMSDLIYRPEEEVVAELE 1530
>ref|NM_127510.1| putative WD-40 repeat protein, MSI4
Length = 1790
Score = 226 bits (577), Expect = 2e-57
Identities = 153/453 (33%), Positives = 222/453 (48%), Gaps = 38/453 (8%)
Frame = +1
Query: 4 KEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALH 63
KE + T + + E+Y WK P LYD + H L WPSL+ +W P + + K+
Sbjct: 145 KESGKKTQQSPSVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRL 324
Query: 64 WLVLGTHTSDEQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEG 123
+L T S N LV+A ++ + +++ S+ E V K +T I H G
Sbjct: 325 YLSEQTDGS-VPNTLVIANCEVVKP-RVAAAEHISQFNEEARSPFVK-KYKTII---HPG 486
Query: 124 EVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEGYGL 181
EVNR R +PQN I+AT T S DVL++D P++ G N PDL L GHQ
Sbjct: 487 EVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFA 666
Query: 182 SWNSNLKGHLLSASDDHTVCLWDI------------SAGP-----------KEGKIVDAK 218
+ +LS D +V LW I S+G E V +
Sbjct: 667 LAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQTGEGTDKNESPTVGPR 846
Query: 219 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-AHTAEVNCL 277
++ GH VEDVA+ F SV DD L++WD R+ T P V+ AH A+++C+
Sbjct: 847 GVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTN--PVTKVEKAHDADLHCV 1020
Query: 278 SFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVHWSPHNETILA 332
+NP+ + ++ TGSAD TV L+D R L ++ FE HK + V WSP ++
Sbjct: 1021DWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFG 1200
Query: 333 SSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 392
SS D LN+WD ++ ++ ++ A P L F H GH K+ DF WN ++PW I SVS
Sbjct: 1201SSAEDGLLNIWDYDRVSKK--SDRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVS 1374
Query: 393 ED-------NIMQIWQMAENIYNDEEPDIAAAE 418
+D +QIW+M++ IY EE +A E
Sbjct: 1375DDCETTGGGGTLQIWRMSDLIYRPEEEVVAELE 1473
>gb|AY059799.1| Arabidopsis thaliana putative WD-40 repeat protein, MSI4
(At2g19520; F3P11.12) mRNA, complete cds
Length = 1776
Score = 226 bits (577), Expect = 2e-57
Identities = 153/453 (33%), Positives = 222/453 (48%), Gaps = 38/453 (8%)
Frame = +1
Query: 4 KEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALH 63
KE + T + + E+Y WK P LYD + H L WPSL+ +W P + + K+
Sbjct: 178 KESGKKTQQSPSVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRL 357
Query: 64 WLVLGTHTSDEQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEG 123
+L T S N LV+A ++ + +++ S+ E V K +T I H G
Sbjct: 358 YLSEQTDGS-VPNTLVIANCEVVKP-RVAAAEHISQFNEEARSPFVK-KYKTII---HPG 519
Query: 124 EVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEGYGL 181
EVNR R +PQN I+AT T S DVL++D P++ G N PDL L GHQ
Sbjct: 520 EVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFA 699
Query: 182 SWNSNLKGHLLSASDDHTVCLWDI------------SAGP-----------KEGKIVDAK 218
+ +LS D +V LW I S+G E V +
Sbjct: 700 LAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQTGEGTDKNESPTVGPR 879
Query: 219 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-AHTAEVNCL 277
++ GH VEDVA+ F SV DD L++WD R+ T P V+ AH A+++C+
Sbjct: 880 GVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTN--PVTKVEKAHDADLHCV 1053
Query: 278 SFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVHWSPHNETILA 332
+NP+ + ++ TGSAD TV L+D R L ++ FE HK + V WSP ++
Sbjct: 1054DWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFG 1233
Query: 333 SSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 392
SS D LN+WD ++ ++ ++ A P L F H GH K+ DF WN ++PW I SVS
Sbjct: 1234SSAEDGLLNIWDYDRVSKK--SDRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVS 1407
Query: 393 ED-------NIMQIWQMAENIYNDEEPDIAAAE 418
+D +QIW+M++ IY EE +A E
Sbjct: 1408DDCETTGGGGTLQIWRMSDLIYRPEEEVVAELE 1506
>gb|AF028711.1|AF028711 Arabidopsis thaliana WD-40 repeat protein MSI4 (MSI4) mRNA,
complete cds
Length = 1815
Score = 226 bits (576), Expect = 3e-57
Identities = 154/450 (34%), Positives = 223/450 (49%), Gaps = 38/450 (8%)
Frame = +1
Query: 4 KEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALH 63
KE + T + + E+Y WK P LYD + H L WPSL+ +W P + + K+
Sbjct: 145 KESGKKTQQSPSVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRL 324
Query: 64 WLVLGTHTSDEQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEG 123
+L T S N LV+A ++ + +++ S+ E V K +T I H G
Sbjct: 325 YLSEQTDGS-VPNTLVIANCEVVKP-RVAAAEHISQFNEEARSPFVK-KYKTII---HPG 486
Query: 124 EVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEGYGL 181
EVNR R +PQN I+AT T S DVL++D P++ G N PDL L GHQ
Sbjct: 487 EVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHPVLGAANSRPDLILTGHQDNAEFA 666
Query: 182 SWNSNLKGHLLSASDDHTVCLWDI------------SAG-----PKEGK------IVDAK 218
+ +LS D +V LW I S+G P EG V +
Sbjct: 667 LAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQPGEGTDKNESPTVGPR 846
Query: 219 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-AHTAEVNCL 277
++ GH VEDVA+ F SV DD L++WD R+ T P V+ AH A+++C+
Sbjct: 847 GVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTN--PVTKVEKAHDADLHCV 1020
Query: 278 SFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVHWSPHNETILA 332
+NP+ + ++ TGSAD TV L+D R L ++ FE HK + V WSP ++
Sbjct: 1021DWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFG 1200
Query: 333 SSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 392
SS D LN+WD ++ ++ ++ A P L F H GH K+ DF WN ++PW I SVS
Sbjct: 1201SSAEDGLLNIWDYDRVSKK--SDRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVS 1374
Query: 393 ED-------NIMQIWQMAENIYNDEEPDIA 415
+D +QIW+M++ IY EE +A
Sbjct: 1375DDCETTGGGGTLQIWRMSDLIYRPEEEVVA 1464
>emb|Y18519.1|SLA18519 Silene latifolia mRNA for X1 protein
Length = 1763
Score = 221 bits (563), Expect = 1e-55
Identities = 146/443 (32%), Positives = 212/443 (46%), Gaps = 43/443 (9%)
Frame = +2
Query: 16 ISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLGTHTSDEQ 75
+ E+Y WK P LYD + H L WPSL+ +W P + K+ +L T S
Sbjct: 44 VDEKYSQWKSLVPILYDWLANHNLVWPSLSCRWGPLIEEATYKNRQRLYLSEQTDGS-VP 220
Query: 76 NHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMPQNP 135
N LV+A V++ + +++ S+ E V K +T I H GEVNR R +PQN
Sbjct: 221 NTLVIANVEVVKP-RVAAAEHISKFNEEARSPFVR-KFKTII---HPGEVNRIRELPQNS 385
Query: 136 YIIATKTPSADVLVFDYTKHPSKPDPSG--ECNPDLRLRGHQKEGYGLSWNSNLKGHLLS 193
I+AT T S DV ++D P++P G PDL L GHQ + + +LS
Sbjct: 386 NIVATHTDSPDVYIWDLESQPNRPANLGTPASRPDLTLTGHQDNAEFALAMCSSEPLVLS 565
Query: 194 ASDDHTVCLWDI--------------------------SAGPKEGKIVDAKAIFTGHSAV 227
D +V LW I G + + + I+ GH
Sbjct: 566 GGKDKSVVLWSIHDHISTLATEPGSAKSPNSGSNIKKAGNGNSDNPSIGPRGIYLGHEDT 745
Query: 228 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-AHTAEVNCLSFNPYSEFI 286
VEDV + F SV DD L++WD R+ T P V+ AH A+++C+ +NP+ E +
Sbjct: 746 VEDVQFCPSSAQQFCSVGDDSCLILWDARAGLT--PVTKVEKAHNADLHCVDWNPHDENL 919
Query: 287 LATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVHWSPHNETILASSGTDRRLN 341
+ TGSAD ++ L+D RNL +H F+ H + V WSPHN +I S+ D LN
Sbjct: 920 ILTGSADSSINLFDRRNLTASGVGSPVHKFQGHDAPVLCVQWSPHNRSIFGSAAEDGLLN 1099
Query: 342 VWDLSKIG--EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED----- 394
+WD K+ E +S + P L F H GH K+ DF WN +PW + SVS+D
Sbjct: 1100IWDYEKVSKMETESGGKKSNHPAGLFFRHAGHRDKVVDFHWNSIDPWTLVSVSDDCSSSA 1279
Query: 395 --NIMQIWQMAENIYNDEEPDIA 415
+QIW++ + +Y EE +A
Sbjct: 1280GGGTLQIWRIIDLLYRPEEEVLA 1348
>emb|Y18517.1|SLA18517 Silene latifolia mRNA for Y1 protein
Length = 1814
Score = 221 bits (562), Expect = 1e-55
Identities = 146/443 (32%), Positives = 212/443 (46%), Gaps = 43/443 (9%)
Frame = +3
Query: 16 ISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLGTHTSDEQ 75
+ E+Y WK P LYD + H L WPSL+ +W P + K+ +L T S
Sbjct: 114 VDEKYSQWKSLVPILYDWLANHNLVWPSLSCRWGPLIEEATYKNRQRLYLSEQTDGS-VP 290
Query: 76 NHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMPQNP 135
N LV+A V++ + +++ S+ E V K +T I H GEVNR R +PQN
Sbjct: 291 NTLVIANVEVVKP-RVAAAEHISKFNEEARSPFVR-KFKTII---HPGEVNRIRELPQNS 455
Query: 136 YIIATKTPSADVLVFDYTKHPSKPDPSG--ECNPDLRLRGHQKEGYGLSWNSNLKGHLLS 193
I+AT T S DV ++D P++P G PDL L GHQ + + +LS
Sbjct: 456 NIVATHTDSPDVYIWDLESQPNRPANWGTPASRPDLTLTGHQDNAEFALAMCSSEPLVLS 635
Query: 194 ASDDHTVCLWDI--------------------------SAGPKEGKIVDAKAIFTGHSAV 227
D +V LW I G + + + I+ GH
Sbjct: 636 GGKDKSVVLWSIHDHISTLATEPGSAKSPNSGSNIKKAGNGNSDNPSIGPRGIYLGHEDT 815
Query: 228 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-AHTAEVNCLSFNPYSEFI 286
VEDV + F SV DD L++WD R+ T P V+ AH A+++C+ +NP+ E +
Sbjct: 816 VEDVQFCPSSAQQFCSVGDDSCLILWDARAGLT--PVTKVEKAHNADLHCVDWNPHDENL 989
Query: 287 LATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVHWSPHNETILASSGTDRRLN 341
+ TGSAD ++ L+D RNL +H F+ H + V WSPHN +I S+ D LN
Sbjct: 990 ILTGSADSSINLFDRRNLTASGVGSPVHKFQGHDAPVLCVQWSPHNRSIFGSAAEDGLLN 1169
Query: 342 VWDLSKIG--EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED----- 394
+WD K+ E +S + P L F H GH K+ DF WN +PW + SVS+D
Sbjct: 1170IWDYEKVSKMETESGGKKSNHPAGLFFRHAGHRDKVVDFHWNSIDPWTLVSVSDDCSSSA 1349
Query: 395 --NIMQIWQMAENIYNDEEPDIA 415
+QIW++ + +Y EE +A
Sbjct: 1350GGGTLQIWRIIDLLYGPEEEVLA 1418
>ref|NM_119118.1| WD-40 repeat - like protein
Length = 1491
Score = 216 bits (550), Expect = 3e-54
Identities = 146/448 (32%), Positives = 215/448 (47%), Gaps = 41/448 (9%)
Frame = +1
Query: 12 EERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLGTHT 71
++ + + Y WK P LYD + H L WPSL+ +W P + + K L+ L T
Sbjct: 148 QKATVDDTYSQWKTLLPILYDSFVNHTLVWPSLSCRWGPQLEQAGSKTQRLY---LSEQT 318
Query: 72 SDE-QNHLVVARVQIPNDD--QFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRA 128
+ N LV+A + N F + +EK K +T I H GEVNR
Sbjct: 319 NGSVPNTLVIANCETVNRQVISFSLPKLLNEKAH----SPFVKKYKTII---HPGEVNRI 477
Query: 129 RYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSG--ECNPDLRLRGHQKEGYGLSWNSN 186
R +PQN I+AT T S D+L+++ P + G + PDL L GHQ +
Sbjct: 478 RELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDAEFALAMCP 657
Query: 187 LKGHLLSASDDHTVCLWDIS-----AGPKE------------------GKIVDAKAIFTG 223
+ +LS D +V LW+I AG G V + I+ G
Sbjct: 658 TEPFVLSGGKDKSVILWNIQDHITMAGSDSKSPGSSFKQTGEGSDKTGGPSVGPRGIYNG 837
Query: 224 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-AHTAEVNCLSFNPY 282
H VEDVA+ F SV DD LM+WD R+ T+ P+ V+ AH A+++C+ +NP+
Sbjct: 838 HKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTS--PAMKVEKAHDADLHCVDWNPH 1011
Query: 283 SEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVHWSPHNETILASSGTD 337
++ TGSAD TV ++D RNL ++ FE H+ + V WSP ++ SS D
Sbjct: 1012DNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAED 1191
Query: 338 RRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED--- 394
LN+WD ++G++ +E A P L F H GH K+ DF W+ PW I SVS++
Sbjct: 1192GLLNIWDCDRVGKK--SERATKTPDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVSDNCES 1365
Query: 395 ----NIMQIWQMAENIYNDEEPDIAAAE 418
+QIW+M++ IY E+ + E
Sbjct: 1366IGGGGTLQIWRMSDLIYRPEDEVLTELE 1449
>emb|AL114645.1|CNS01BST Botrytis cinerea strain T4 cDNA library under conditions of
nitrogen deprivation
Length = 720
Score = 212 bits (539), Expect = 6e-53
Identities = 100/205 (48%), Positives = 142/205 (68%), Gaps = 7/205 (3%)
Frame = +1
Query: 9 DTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLG 68
+ +E+++I+EEYK WKKN+PFLYD++++ ALEWP+LT QW PDV P GK+Y++H L++G
Sbjct: 100 EDMEQKIINEEYKTWKKNSPFLYDMILSTALEWPTLTTQWFPDVKEPAGKNYSVHRLLIG 279
Query: 69 THTSD-EQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTG------KIETEIKINH 121
THTS+ QN+L +A V++P + + YD ++ E GG+G + K+ E KI+H
Sbjct: 280 THTSNGAQNYLQIANVELPKNVTPNHVDYDEDREEIGGYGKSSSGEQAAIKMTIEQKIDH 459
Query: 122 EGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGL 181
GEVN+ARY PQNP IIAT VL+FD TKH S P G +P + L GH+KEG+GL
Sbjct: 460 PGEVNKARYQPQNPNIIATMCVDGRVLIFDRTKHSSL--PKGVVSPQIELIGHKKEGFGL 633
Query: 182 SWNSNLKGHLLSASDDHTVCLWDIS 206
WN ++ G L + S+D TV LWD++
Sbjct: 634 GWNPHVAGELATGSEDKTVRLWDLN 708
Score = 41.6 bits (96), Expect = 0.14
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Frame = +1
Query: 224 HSAVVEDVAWHLLHESLFGSVADDQKLMIWD-TRSNTTSK----PSHSVDAHTAEVNCLS 278
H V + + ++ ++ D +++I+D T+ ++ K P + H E L
Sbjct: 457 HPGEVNKARYQPQNPNIIATMCVDGRVLIFDRTKHSSLPKGVVSPQIELIGHKKEGFGLG 636
Query: 279 FNPYSEFILATGSADKTVALWDLRNLK 305
+NP+ LATGS DKTV LWDL L+
Sbjct: 637 WNPHVAGELATGSEDKTVRLWDLNTLQ 717
Score = 40.4 bits (93), Expect = 0.31
Identities = 24/86 (27%), Positives = 39/86 (44%), Gaps = 7/86 (8%)
Frame = +1
Query: 270 HTAEVNCLSFNPYSEFILATGSADKTVALWDL-------RNLKLKLHSFESHKDEIFQVH 322
H EVN + P + I+AT D V ++D + + HK E F +
Sbjct: 457 HPGEVNKARYQPQNPNIIATMCVDGRVLIFDRTKHSSLPKGVVSPQIELIGHKKEGFGLG 636
Query: 323 WSPHNETILASSGTDRRLNVWDLSKI 348
W+PH LA+ D+ + +WDL+ +
Sbjct: 637 WNPHVAGELATGSEDKTVRLWDLNTL 714
Score = 38.5 bits (88), Expect = 1.2
Identities = 23/99 (23%), Positives = 46/99 (46%)
Frame = +1
Query: 304 LKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPE 363
+K+ + H E+ + + P N I+A+ D R+ ++D +K S+ P+
Sbjct: 427 IKMTIEQKIDHPGEVNKARYQPQNPNIIATMCVDGRVLIFDRTK----HSSLPKGVVSPQ 594
Query: 364 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
+ I GH + WNP+ + + SED +++W +
Sbjct: 595 IELI--GHKKEGFGLGWNPHVAGELATGSEDKTVRLWDL 705
>emb|Z36064.1|SCYBR195C S.cerevisiae chromosome II reading frame ORF YBR195c
Length = 1832
Score = 188 bits (477), Expect = 9e-46
Identities = 123/425 (28%), Positives = 201/425 (46%), Gaps = 28/425 (6%)
Frame = -3
Query: 16 ISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLGTHTSD-- 73
+ E Y WKKNT LYD + T++ +WPSLT Q+ PD+ + H ++L + TS
Sbjct: 1422 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDE----HRILLSSFTSSQK 1255
Query: 74 -EQNHLVVARVQIPNDDQFDT-SQYDSEKGEFGGFGSV---TGKIETEIKINH-EGEVNR 127
E + ++++ ++ + + +D ++ EF S + + +I I GE NR
Sbjct: 1254 PEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNR 1075
Query: 128 ARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNP--DLRLRGHQ---------- 175
ARY+PQNP IIA + + +FD TKH S + + + +L G
Sbjct: 1074 ARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMD 895
Query: 176 ------KEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAI-FTGHSAVV 228
E L+WN + LLS+ + V +WDI E I+D + V
Sbjct: 894 TSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINSDGTAV 715
Query: 229 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILA 288
DV W H+SLF + + + + D R+ S+ + H VN FN + ILA
Sbjct: 714 NDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNR-EKHDGGVNSCRFNYKNSLILA 538
Query: 289 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGT-DRRLNVWDLSK 347
+ ++ + LWD+RN+ + H + + WSP+ +T+LA++G D + +WD S
Sbjct: 537 SADSNGRLNLWDIRNMNKSPIATMEHGTSVSTLEWSPNFDTVLATAGQEDGLVKLWDTSC 358
Query: 348 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 407
E +F HGGH ++D SW+ ++PW++CSV+ DN + IW+ A N+
Sbjct: 357 --------------EETIFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHIWKPAGNLV 220
Query: 408 NDEEP 412
P
Sbjct: 219 GHS*P 205
>emb|Z21487.1|SCCHRIIFG S.cerevisiae RIM, MSI1, PGI, and ribosomal protein L21 genes
Length = 30981
Score = 188 bits (477), Expect = 9e-46
Identities = 123/425 (28%), Positives = 201/425 (46%), Gaps = 28/425 (6%)
Frame = -2
Query: 16 ISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLGTHTSD-- 73
+ E Y WKKNT LYD + T++ +WPSLT Q+ PD+ + H ++L + TS
Sbjct: 5054 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDE----HRILLSSFTSSQK 4887
Query: 74 -EQNHLVVARVQIPNDDQFDT-SQYDSEKGEFGGFGSV---TGKIETEIKINH-EGEVNR 127
E + ++++ ++ + + +D ++ EF S + + +I I GE NR
Sbjct: 4886 PEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNR 4707
Query: 128 ARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNP--DLRLRGHQ---------- 175
ARY+PQNP IIA + + +FD TKH S + + + +L G
Sbjct: 4706 ARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMD 4527
Query: 176 ------KEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAI-FTGHSAVV 228
E L+WN + LLS+ + V +WDI E I+D + V
Sbjct: 4526 TSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINSDGTAV 4347
Query: 229 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILA 288
DV W H+SLF + + + + D R+ S+ + H VN FN + ILA
Sbjct: 4346 NDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNR-EKHDGGVNSCRFNYKNSLILA 4170
Query: 289 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGT-DRRLNVWDLSK 347
+ ++ + LWD+RN+ + H + + WSP+ +T+LA++G D + +WD S
Sbjct: 4169 SADSNGRLNLWDIRNMNKSPIATMEHGTSVSTLEWSPNFDTVLATAGQEDGLVKLWDTSC 3990
Query: 348 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 407
E +F HGGH ++D SW+ ++PW++CSV+ DN + IW+ A N+
Sbjct: 3989 --------------EETIFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHIWKPAGNLV 3852
Query: 408 NDEEP 412
P
Sbjct: 3851 GHS*P 3837
Score = 63.9 bits (154), Expect = 3e-08
Identities = 63/241 (26%), Positives = 101/241 (41%), Gaps = 1/241 (0%)
Frame = -3
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
+ H G V + P N Y+++ V ++ H + + +GH
Sbjct: 10186 VGHSGTVYSTSFSPDNKYLLSGSEDKT-VRLWSMDTHTAL----------VSYKGHNHPV 10040
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
+ +S+ S L + +AS D T LW + IF GH V+ V++H
Sbjct: 10039 WDVSF-SPLGHYFATASHDQTARLWSCDH-------IYPLRIFAGHLNDVDCVSFHPNGC 9884
Query: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 298
+F + D+ +WD +T HTA V ++ P + L+TGS D + +
Sbjct: 9883 YVFTG-SSDKTCRMWDV---STGDSVRLFLGHTAPVISIAVCPDGRW-LSTGSEDGIINV 9719
Query: 299 WDLRNLKLKLHSFESH-KDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 357
WD+ K +L H K+ I+ + +S +L S G D + VWDL K E SAE
Sbjct: 9718 WDIGTGK-RLKQMRGHGKNAIYSLSYSKEGN-VLISGGADHTVRVWDLKKATTEPSAEPD 9545
Query: 358 E 358
E
Sbjct: 9544 E 9542
>gb|M27300.1|YSCMSI1 S.cerevisiae MSI1 gene, complete cds
Length = 1574
Score = 188 bits (477), Expect = 9e-46
Identities = 123/425 (28%), Positives = 201/425 (46%), Gaps = 28/425 (6%)
Frame = +1
Query: 16 ISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLGTHTSD-- 73
+ E Y WKKNT LYD + T++ +WPSLT Q+ PD+ + H ++L + TS
Sbjct: 178 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDE----HRILLSSFTSSQK 345
Query: 74 -EQNHLVVARVQIPNDDQFDT-SQYDSEKGEFGGFGSV---TGKIETEIKINH-EGEVNR 127
E + ++++ ++ + + +D ++ EF S + + +I I GE NR
Sbjct: 346 PEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNR 525
Query: 128 ARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNP--DLRLRGHQ---------- 175
ARY+PQNP IIA + + +FD TKH S + + + +L G
Sbjct: 526 ARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMD 705
Query: 176 ------KEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAI-FTGHSAVV 228
E L+WN + LLS+ + V +WDI E I+D + V
Sbjct: 706 TSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINSDGTAV 885
Query: 229 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILA 288
DV W H+SLF + + + + D R+ S+ + H VN FN + ILA
Sbjct: 886 NDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNR-EKHDGGVNSCRFNYKNSLILA 1062
Query: 289 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGT-DRRLNVWDLSK 347
+ ++ + LWD+RN+ + H + + WSP+ +T+LA++G D + +WD S
Sbjct: 1063SADSNGRLNLWDIRNMNKSPIATMEHGTSVSTLEWSPNFDTVLATAGQEDGLVKLWDTSC 1242
Query: 348 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 407
E +F HGGH ++D SW+ ++PW++CSV+ DN + IW+ A N+
Sbjct: 1243--------------EETIFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHIWKPAGNLV 1380
Query: 408 NDEEP 412
P
Sbjct: 1381GHS*P 1395
>emb|Z98944.1|SPAC25H1 S.pombe chromosome I cosmid c25H1
Length = 14220
Score = 187 bits (476), Expect = 1e-45
Identities = 131/407 (32%), Positives = 207/407 (50%), Gaps = 18/407 (4%)
Frame = +1
Query: 13 ERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLGTHTS 72
E ISE++ WKKN+ LY+L++T L WPSL++QWL + K + L+LGTH +
Sbjct: 7156 ENQISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAMESITEKAVLKNRLLLGTHAA 7335
Query: 73 DEQ-NHLVVARVQIPNDDQF---DTSQYDSEKGEFGGFGSVTG-KIETEIKINHEGEVNR 127
+ N L +A + +P+ +Q Y+ + GE GG+ K + +I H G+VNR
Sbjct: 7336 EGMPNFLQLADLDLPDFNQTILDPVKHYNEDTGELGGYSMQHSCKFQISQRILHNGDVNR 7515
Query: 128 ARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNL 187
R+MPQNP IIAT + + +FD TK+ S P + E P++ L GH+KEG+GLSWN
Sbjct: 7516 VRHMPQNPNIIATMSSCGNAYIFDRTKYTSMP--AEEFLPNISLIGHKKEGFGLSWNRQQ 7689
Query: 188 KGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADD 247
L++A++D + WD++ ++ + + F + V DV +H H +L+ +V D+
Sbjct: 7690 NCRLVTAANDSKILEWDLNNFSRDTRCLTPVKDFHYDDSPVNDVEYHPHHTNLYIAVNDN 7869
Query: 248 QKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL-KL 306
I D R T S +V A + + + NP + A GS ++ + LWDLRNL K
Sbjct: 7870 GIAFICDNRLQQTC--SKTVKA-SNPLFSVRHNPSIATLFALGS-EQDLQLWDLRNLNKS 8037
Query: 307 KLHSFESHKDEIFQV-----------HWS-PHNETILASSGTDRRLNVWDLSKIGEEQSA 354
++ E D +V WS H+ I+ S VW+ +K
Sbjct: 8038 VFNTSEDLSDNRLKVPSRLTLGGTSLSWSWRHSGRIV--SACQEYCYVWNFNKAN----- 8196
Query: 355 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 401
L F+H GH +++ ++P E I SV++DN + IW+
Sbjct: 8197 --------PLEFVHAGHKGTVNEVDFDPFEAQCIASVADDNELHIWK 8313
Score = 40.4 bits (93), Expect = 0.31
Identities = 22/77 (28%), Positives = 37/77 (47%)
Frame = -3
Query: 270 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNET 329
H V +S NP + A+G D +WD+ + ++ HKD I + WS + T
Sbjct: 13378 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGE-QICQLTGHKDSIVAIDWS-FDGT 13205
Query: 330 ILASSGTDRRLNVWDLS 346
+A+ G D ++ +W S
Sbjct: 13204 YIATGGMDSQVRLWKSS 13154
>ref|XM_067237.1| Homo sapiens similar to Rbap46 polypeptide (LOC131167), mRNA
Length = 630
Score = 172 bits (435), Expect = 7e-41
Identities = 110/261 (42%), Positives = 131/261 (50%), Gaps = 17/261 (6%)
Frame = +1
Query: 1 MASKEV-LEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 59
M +KE ++ VEE VI EEYKIWK NT F YDLVMT ALEWPSLT QWLPDV+RPEGKD
Sbjct: 40 MTNKEAAFDNAVEEHVIKEEYKIWKNNTSFPYDLVMTQALEWPSLTAQWLPDVTRPEGKD 219
Query: 60 YALHWLVLGTHTSDEQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKI 119
++ H LV GTH T ++
Sbjct: 220 FSSHRLVPGTH--------------------------------------------TSVEQ 267
Query: 120 NHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY 179
NH + PS D + D + + SK GEC DL L GHQK G
Sbjct: 268 NH-----------------LVQLPSDDAQL-DASHYNSK---KGECG-DLHLCGHQKAGC 381
Query: 180 GLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVV----------- 228
GL N NL GHLL SD+HT+CLWDISA E K+++ K IFTGH+AV
Sbjct: 382 GLLRNPNLSGHLLITSDNHTICLWDISAVSNEEKVLNVKTIFTGHTAVFGDRDASSHLYH 561
Query: 229 -----EDVAWHLLHESLFGSV 244
+D + HL HESLFGS+
Sbjct: 562 NLYYGKDASSHLFHESLFGSI 624
>emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 82
Length = 195165
Score = 134 bits (337), Expect(2) = 3e-39
Identities = 65/129 (50%), Positives = 85/129 (65%), Gaps = 29/129 (22%)
Frame = -2
Query: 314 HKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK-------------------------- 347
++ E+FQV W P++ET+LASSG DRRL VWD+++
Sbjct: 137978 YRGEVFQVEWDPNHETVLASSGEDRRLMVWDINRYHSRYFPFHLIQN*NWIS*FQFGGSF 137799
Query: 348 -IGEEQSAE--DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 404
+G+EQ DAEDGPPELLF HGGH AKISDF+WN +EPWVI SV+EDN +Q+WQMAE
Sbjct: 137798 RVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAE 137619
Query: 405 NIYNDEEPD 413
+IY +++ D
Sbjct: 137618 SIYREDDED 137592
Score = 113 bits (282), Expect = 4e-23
Identities = 51/96 (53%), Positives = 70/96 (72%)
Frame = -2
Query: 112 KIETEIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRL 171
++E + KI +GEVNRAR MPQ P ++ KT ++V +FDY + KP S EC+PDLRL
Sbjct: 138947 QVEIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRL 138771
Query: 172 RGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISA 207
GH++EGYGL+W+S +G+LLS S D +CLWD+SA
Sbjct: 138770 MGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSA 138663
Score = 91.3 bits (225), Expect = 2e-16
Identities = 47/92 (51%), Positives = 65/92 (70%), Gaps = 3/92 (3%)
Frame = -3
Query: 1 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD- 59
MA++E ++ ++V EE+ IWK+NTPFLYDL+++H LEWPSLT+ W+P P KD
Sbjct: 139531 MAAEEGKDEAGLDQV-EEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDP 139355
Query: 60 -YALHWLVLGTHTS-DEQNHLVVARVQIPNDD 89
+A+H L+LGTHTS Q+ L+VA V IP D
Sbjct: 139354 YFAVHKLILGTHTSGGAQDFLMVADVVIPTPD 139259
Score = 60.5 bits (145), Expect = 3e-07
Identities = 27/58 (46%), Positives = 39/58 (66%)
Frame = -1
Query: 221 FTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLS 278
F GH +++EDVAWH+ +E++FGS DD +L+IWD R+N + H V H EV +S
Sbjct: 138534 F*GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN---QMQHQVKVHEREV*TIS 138370
Score = 53.5 bits (127), Expect(2) = 3e-39
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = -3
Query: 262 KPS--HSVDAHTA-EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK 315
KPS HS + ++N LSFNP++E++LAT S+D TVAL+DLR L LH H+
Sbjct: 138232 KPSSDHSTTLSSVLQINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHE 138062
Score = 42.7 bits (99), Expect = 0.063
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = -3
Query: 267 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLKLKLHSFESHKDEIFQVHWS 324
++ H VN +SFN + +L +GS D+ V LWD L N+KL HS H + +FQ +
Sbjct: 180955 LEKHKGCVNTVSFNAEGD-VLISGSDDRRVVLWDWQLGNVKLSFHS--GHANNVFQAKFM 180785
Query: 325 PHNE 328
P ++
Sbjct: 180784 PFSD 180773
Score = 39.7 bits (91), Expect = 0.53
Identities = 34/134 (25%), Positives = 55/134 (40%), Gaps = 2/134 (1%)
Frame = -2
Query: 228 VEDVAWHLLHESLFGSVADDQKLMIWD-TRSNTTSKPSHSVDAHTAEVNCLS-FNPYSEF 285
V V W HE++ S +D++LM+WD R ++ P H + N +S F F
Sbjct: 137966 VFQVEWDPNHETVLASSGEDRRLMVWDINRYHSRYFPFHLIQ----N*NWIS*FQFGGSF 137799
Query: 286 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 345
G + L L S HK +I W+ +++S D L VW +
Sbjct: 137798 --RVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQM 137625
Query: 346 SKIGEEQSAEDAED 359
++ + ED +D
Sbjct: 137624 AESIYREDDEDEDD 137583
Score = 32.7 bits (73), Expect(2) = 0.55
Identities = 22/82 (26%), Positives = 35/82 (41%), Gaps = 8/82 (9%)
Frame = -2
Query: 273 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE--------SHKDEIFQVHWS 324
EVN P ++ ++ V L+D L K + E H+ E + + WS
Sbjct: 138911 EVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWS 138732
Query: 325 PHNETILASSGTDRRLNVWDLS 346
E L S D+R+ +WD+S
Sbjct: 138731 SFKEGYLLSGSQDQRICLWDVS 138666
Score = 25.4 bits (54), Expect(2) = 0.55
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -1
Query: 357 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 405
A D PE F GH + I D +W+ + S +D + IW + N
Sbjct: 138561 ASDLIPETWF*--GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN 138421
>emb|AL035522.1|ATT12J5 Arabidopsis thaliana DNA chromosome 4, BAC clone T12J5 (ESSAII
project)
Length = 84499
Score = 134 bits (337), Expect(2) = 3e-39
Identities = 65/129 (50%), Positives = 85/129 (65%), Gaps = 29/129 (22%)
Frame = -3
Query: 314 HKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK-------------------------- 347
++ E+FQV W P++ET+LASSG DRRL VWD+++
Sbjct: 8057 YRGEVFQVEWDPNHETVLASSGEDRRLMVWDINRYHSRYFPFHLIQN*NWIS*FQFGGSF 7878
Query: 348 -IGEEQSAE--DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 404
+G+EQ DAEDGPPELLF HGGH AKISDF+WN +EPWVI SV+EDN +Q+WQMAE
Sbjct: 7877 RVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAE 7698
Query: 405 NIYNDEEPD 413
+IY +++ D
Sbjct: 7697 SIYREDDED 7671
Score = 113 bits (282), Expect = 4e-23
Identities = 51/96 (53%), Positives = 70/96 (72%)
Frame = -3
Query: 112 KIETEIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRL 171
++E + KI +GEVNRAR MPQ P ++ KT ++V +FDY + KP S EC+PDLRL
Sbjct: 9026 QVEIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRL 8850
Query: 172 RGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISA 207
GH++EGYGL+W+S +G+LLS S D +CLWD+SA
Sbjct: 8849 MGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSA 8742
Score = 91.3 bits (225), Expect = 2e-16
Identities = 47/92 (51%), Positives = 65/92 (70%), Gaps = 3/92 (3%)
Frame = -1
Query: 1 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD- 59
MA++E ++ ++V EE+ IWK+NTPFLYDL+++H LEWPSLT+ W+P P KD
Sbjct: 9610 MAAEEGKDEAGLDQV-EEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDP 9434
Query: 60 -YALHWLVLGTHTS-DEQNHLVVARVQIPNDD 89
+A+H L+LGTHTS Q+ L+VA V IP D
Sbjct: 9433 YFAVHKLILGTHTSGGAQDFLMVADVVIPTPD 9338
Score = 60.5 bits (145), Expect = 3e-07
Identities = 27/58 (46%), Positives = 39/58 (66%)
Frame = -2
Query: 221 FTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLS 278
F GH +++EDVAWH+ +E++FGS DD +L+IWD R+N + H V H EV +S
Sbjct: 8613 F*GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN---QMQHQVKVHEREV*TIS 8449
Score = 53.5 bits (127), Expect(2) = 3e-39
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = -1
Query: 262 KPS--HSVDAHTA-EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK 315
KPS HS + ++N LSFNP++E++LAT S+D TVAL+DLR L LH H+
Sbjct: 8311 KPSSDHSTTLSSVLQINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHE 8141
Score = 42.7 bits (99), Expect = 0.063
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = -2
Query: 267 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLKLKLHSFESHKDEIFQVHWS 324
++ H VN +SFN + +L +GS D+ V LWD L N+KL HS H + +FQ +
Sbjct: 51033 LEKHKGCVNTVSFNAEGD-VLISGSDDRRVVLWDWQLGNVKLSFHS--GHANNVFQAKFM 50863
Query: 325 PHNE 328
P ++
Sbjct: 50862 PFSD 50851
Score = 39.7 bits (91), Expect = 0.53
Identities = 34/134 (25%), Positives = 55/134 (40%), Gaps = 2/134 (1%)
Frame = -3
Query: 228 VEDVAWHLLHESLFGSVADDQKLMIWD-TRSNTTSKPSHSVDAHTAEVNCLS-FNPYSEF 285
V V W HE++ S +D++LM+WD R ++ P H + N +S F F
Sbjct: 8045 VFQVEWDPNHETVLASSGEDRRLMVWDINRYHSRYFPFHLIQ----N*NWIS*FQFGGSF 7878
Query: 286 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 345
G + L L S HK +I W+ +++S D L VW +
Sbjct: 7877 --RVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQM 7704
Query: 346 SKIGEEQSAEDAED 359
++ + ED +D
Sbjct: 7703 AESIYREDDEDEDD 7662
Score = 32.7 bits (73), Expect(2) = 0.58
Identities = 22/82 (26%), Positives = 35/82 (41%), Gaps = 8/82 (9%)
Frame = -3
Query: 273 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE--------SHKDEIFQVHWS 324
EVN P ++ ++ V L+D L K + E H+ E + + WS
Sbjct: 8990 EVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWS 8811
Query: 325 PHNETILASSGTDRRLNVWDLS 346
E L S D+R+ +WD+S
Sbjct: 8810 SFKEGYLLSGSQDQRICLWDVS 8745
Score = 25.4 bits (54), Expect(2) = 0.58
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 357 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 405
A D PE F GH + I D +W+ + S +D + IW + N
Sbjct: 8640 ASDLIPETWF*--GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN 8500
>emb|AL022023.1|ATM4E13 Arabidopsis thaliana DNA chromosome 4, BAC clone M4E13 (ESSAII project)
Length = 80346
Score = 134 bits (337), Expect(2) = 3e-39
Identities = 65/129 (50%), Positives = 85/129 (65%), Gaps = 29/129 (22%)
Frame = -2
Query: 314 HKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK-------------------------- 347
++ E+FQV W P++ET+LASSG DRRL VWD+++
Sbjct: 39011 YRGEVFQVEWDPNHETVLASSGEDRRLMVWDINRYHSRYFPFHLIQN*NWIS*FQFGGSF 38832
Query: 348 -IGEEQSAE--DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 404
+G+EQ DAEDGPPELLF HGGH AKISDF+WN +EPWVI SV+EDN +Q+WQMAE
Sbjct: 38831 RVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAE 38652
Query: 405 NIYNDEEPD 413
+IY +++ D
Sbjct: 38651 SIYREDDED 38625
Score = 113 bits (282), Expect = 4e-23
Identities = 51/96 (53%), Positives = 70/96 (72%)
Frame = -2
Query: 112 KIETEIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRL 171
++E + KI +GEVNRAR MPQ P ++ KT ++V +FDY + KP S EC+PDLRL
Sbjct: 39980 QVEIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRL 39804
Query: 172 RGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISA 207
GH++EGYGL+W+S +G+LLS S D +CLWD+SA
Sbjct: 39803 MGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSA 39696
Score = 91.3 bits (225), Expect = 2e-16
Identities = 47/92 (51%), Positives = 65/92 (70%), Gaps = 3/92 (3%)
Frame = -3
Query: 1 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD- 59
MA++E ++ ++V EE+ IWK+NTPFLYDL+++H LEWPSLT+ W+P P KD
Sbjct: 40564 MAAEEGKDEAGLDQV-EEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDP 40388
Query: 60 -YALHWLVLGTHTS-DEQNHLVVARVQIPNDD 89
+A+H L+LGTHTS Q+ L+VA V IP D
Sbjct: 40387 YFAVHKLILGTHTSGGAQDFLMVADVVIPTPD 40292
Score = 60.5 bits (145), Expect = 3e-07
Identities = 27/58 (46%), Positives = 39/58 (66%)
Frame = -1
Query: 221 FTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLS 278
F GH +++EDVAWH+ +E++FGS DD +L+IWD R+N + H V H EV +S
Sbjct: 39567 F*GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN---QMQHQVKVHEREV*TIS 39403
Score = 53.5 bits (127), Expect(2) = 3e-39
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = -3
Query: 262 KPS--HSVDAHTA-EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK 315
KPS HS + ++N LSFNP++E++LAT S+D TVAL+DLR L LH H+
Sbjct: 39265 KPSSDHSTTLSSVLQINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHE 39095
Score = 39.7 bits (91), Expect = 0.53
Identities = 34/134 (25%), Positives = 55/134 (40%), Gaps = 2/134 (1%)
Frame = -2
Query: 228 VEDVAWHLLHESLFGSVADDQKLMIWD-TRSNTTSKPSHSVDAHTAEVNCLS-FNPYSEF 285
V V W HE++ S +D++LM+WD R ++ P H + N +S F F
Sbjct: 38999 VFQVEWDPNHETVLASSGEDRRLMVWDINRYHSRYFPFHLIQ----N*NWIS*FQFGGSF 38832
Query: 286 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 345
G + L L S HK +I W+ +++S D L VW +
Sbjct: 38831 --RVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQM 38658
Query: 346 SKIGEEQSAEDAED 359
++ + ED +D
Sbjct: 38657 AESIYREDDEDEDD 38616
Score = 32.7 bits (73), Expect(2) = 0.58
Identities = 22/82 (26%), Positives = 35/82 (41%), Gaps = 8/82 (9%)
Frame = -2
Query: 273 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE--------SHKDEIFQVHWS 324
EVN P ++ ++ V L+D L K + E H+ E + + WS
Sbjct: 39944 EVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWS 39765
Query: 325 PHNETILASSGTDRRLNVWDLS 346
E L S D+R+ +WD+S
Sbjct: 39764 SFKEGYLLSGSQDQRICLWDVS 39699
Score = 25.4 bits (54), Expect(2) = 0.58
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -1
Query: 357 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 405
A D PE F GH + I D +W+ + S +D + IW + N
Sbjct: 39594 ASDLIPETWF*--GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN 39454
>gb|AC005825.3|AC005825 Arabidopsis thaliana chromosome II section 96 of 255 of the complete
sequence. Sequence from clones T24I21, F12A24
Length = 97380
Score = 154 bits (389), Expect = 1e-35
Identities = 80/193 (41%), Positives = 112/193 (57%), Gaps = 30/193 (15%)
Frame = -3
Query: 112 KIETEIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRL 171
++E +I +GEVNRAR MPQ P ++ KT +V +FDY KH +K S EC+PDLRL
Sbjct: 87430 QVEIRQRIRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTS-ECDPDLRL 87254
Query: 172 RGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAK------------- 218
GH KEGYGLSW+ +G+LLS S D +CLWD+SA P++ K+++A
Sbjct: 87253 VGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQD-KVLNAMFVYEVKGTV*LVS 87077
Query: 219 -----------------AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTS 261
+F GH + + DV+WH+ +E+LFGS +D +L+IWDTR+N
Sbjct: 87076 FFCFQKMWFDTSDFTLLILF*GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTN--- 86906
Query: 262 KPSHSVDAHTAEV 274
+ H V H EV
Sbjct: 86905 QMQHQVKVHEREV 86867
Score = 107 bits (267), Expect(2) = 7e-39
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 2/67 (2%)
Frame = -1
Query: 347 KIGEEQSAE--DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 404
++GEEQ DAEDGPPELLF HGGH AKISDF+WN NEPWVI SV+EDN +Q+WQMAE
Sbjct: 86244 RVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAE 86065
Query: 405 NIYNDEE 411
+IY DEE
Sbjct: 86064 SIYRDEE 86044
Score = 86.3 bits (212), Expect = 5e-15
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 7/91 (7%)
Frame = -3
Query: 3 SKEVLEDTVEERV----ISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGK 58
++E++ D +E + E++ +WKKNTPFLYDL+++H LEWPSLTV W+P P
Sbjct: 87982 AREIMADEGKEETGMGQVEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVA 87803
Query: 59 D--YALHWLVLGTHTS-DEQNHLVVARVQIP 86
D + +H L+LGTHTS Q+ L+VA V P
Sbjct: 87802 DSYFGVHKLILGTHTSGSAQDFLMVADVVTP 87710
Score = 79.3 bits (194), Expect(2) = 7e-39
Identities = 46/127 (36%), Positives = 61/127 (47%), Gaps = 51/127 (40%)
Frame = -2
Query: 272 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH----------------- 314
++VN LSFNP++E++LAT S+D TVAL+DLR L LH SH
Sbjct: 86723 SQVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEYVPLHFLITSALSINC 86544
Query: 315 ----------------------------------KDEIFQVHWSPHNETILASSGTDRRL 340
+ E+FQV W P++ET+LASSG DRRL
Sbjct: 86543 VRTKC*YLWTPVD*VTVKDCLL*KSTFLKKYSDFRGEVFQVEWDPNHETVLASSGEDRRL 86364
Query: 341 NVWDLSK 347
VWDL++
Sbjct: 86363 MVWDLNR 86343
Score = 40.0 bits (92), Expect = 0.41
Identities = 37/165 (22%), Positives = 59/165 (35%), Gaps = 32/165 (19%)
Frame = -3
Query: 273 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE--------SHKDEIFQVHWS 324
EVN P ++ ++ V L+D K + E H E + + WS
Sbjct: 87394 EVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTSECDPDLRLVGHDKEGYGLSWS 87215
Query: 325 PHNETILASSGTDRRLNVWDLSKIGEEQSAE------------------------DAEDG 360
P E L S D+++ +WD+S +++ D D
Sbjct: 87214 PFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEVKGTV*LVSFFCFQKMWFDTSDF 87035
Query: 361 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 405
LL + GH + I+D SW+ + S ED + IW N
Sbjct: 87034 --TLLILF*GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTN 86906
>ref|NM_127512.1| putative WD-40 repeat protein
Length = 1617
Score = 157 bits (398), Expect = 1e-36
Identities = 116/357 (32%), Positives = 171/357 (47%), Gaps = 27/357 (7%)
Frame = +1
Query: 87 NDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMPQNPYIIATKTPSAD 146
++D+ D DS+ + G S T I+ ++ H G VNR R MPQN +I + S
Sbjct: 418 DEDEDDEDDSDSDDDD-GDEASKTPNIQVR-RVAHHGCVNRIRAMPQNSHICVSWADSGH 591
Query: 147 VLVFDYTKH---------PSKPDPSGECN--PDLRLRGHQKEGYGLSWNSNLKGHLLSAS 195
V V+D + H K S N P + GH+ EGY + W+ G LLS
Sbjct: 592 VQVWDMSSHLNALAESETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGD 771
Query: 196 DDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDT 255
+ LW+ P G F GH+A VED+ W E++F S + D + +WD
Sbjct: 772 CKSMIHLWE----PASGSWAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDI 939
Query: 256 RSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK---LKLHSFE 312
R + P+ S AH A+VN +S+N + +LA+GS D T ++ DLR +K + FE
Sbjct: 940 RLGKS--PALSFKAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFE 1113
Query: 313 SHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQSAE----------DAEDGP 361
HK I + WS H + LA + D +L +WDLS + EE+ AE +D P
Sbjct: 1114YHKHPITSIEWSAHEASTLAVTSGDNQLTIWDLSLEKDEEEEAEFNAQTKELVNTPQDLP 1293
Query: 362 PELLFIHGGHTAKISDFSWNPNEPWVICSVSED--NIMQIWQMAENIYNDEEPDIAA 416
P+LLF+H G + + W+ P +I S + D NI+ M NI N ++ A
Sbjct: 1294PQLLFVHQGQ-KDLKELHWHNQIPGMIISTAGDGFNIL----MPYNIQNTLPSELPA 1449
>gb|AF370506.1|AF370506 Arabidopsis thaliana putative WD-40 repeat protein (At2g19540;
F3P11.14) mRNA, complete cds
Length = 1617
Score = 157 bits (398), Expect = 1e-36
Identities = 116/357 (32%), Positives = 171/357 (47%), Gaps = 27/357 (7%)
Frame = +1
Query: 87 NDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMPQNPYIIATKTPSAD 146
++D+ D DS+ + G S T I+ ++ H G VNR R MPQN +I + S
Sbjct: 418 DEDEDDEDDSDSDDDD-GDEASKTPNIQVR-RVAHHGCVNRIRAMPQNSHICVSWADSGH 591
Query: 147 VLVFDYTKH---------PSKPDPSGECN--PDLRLRGHQKEGYGLSWNSNLKGHLLSAS 195
V V+D + H K S N P + GH+ EGY + W+ G LLS
Sbjct: 592 VQVWDMSSHLNALAESETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGD 771
Query: 196 DDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDT 255
+ LW+ P G F GH+A VED+ W E++F S + D + +WD
Sbjct: 772 CKSMIHLWE----PASGSWAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDI 939
Query: 256 RSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK---LKLHSFE 312
R + P+ S AH A+VN +S+N + +LA+GS D T ++ DLR +K + FE
Sbjct: 940 RLGKS--PALSFKAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFE 1113
Query: 313 SHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQSAE----------DAEDGP 361
HK I + WS H + LA + D +L +WDLS + EE+ AE +D P
Sbjct: 1114YHKHPITSIEWSAHEASTLAVTSGDNQLTIWDLSLEKDEEEEAEFNAQTKELVNTPQDLP 1293
Query: 362 PELLFIHGGHTAKISDFSWNPNEPWVICSVSED--NIMQIWQMAENIYNDEEPDIAA 416
P+LLF+H G + + W+ P +I S + D NI+ M NI N ++ A
Sbjct: 1294PQLLFVHQGQ-KDLKELHWHNQIPGMIISTAGDGFNIL----MPYNIQNTLPSELPA 1449
>emb|AL353012.1|SPBC1711 S.pombe chromosome II cosmid c1711
Length = 38000
Score = 131 bits (329), Expect = 1e-28
Identities = 112/394 (28%), Positives = 185/394 (46%), Gaps = 25/394 (6%)
Frame = +3
Query: 28 PFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALH-WLVLGTHTSDEQ-NHLVVARVQI 85
P +Y+++ ++WP L+ L D E + + +LV G+ D N L V ++
Sbjct: 15531 PSVYEMLHNIQVKWPFLSFDILQDSLGEERRAWPHQMYLVGGSQALDSNDNELTVMKLS- 15707
Query: 86 PNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYM--PQNPY---IIAT 140
Q +Q+D I I+ +G NR R P N ++A+
Sbjct: 15708 ----QLYKTQHDENDDASDNSDVEEDPILEHKSISTKGACNRVRSARRPANSSKESLLAS 15875
Query: 141 KTPSADVLVFDYTKHPSKPDPSG------ECNPDLRLRGHQKEGYGLSWNSNLKGHLLSA 194
+ V ++D H D G E +P + H+ EGY L W S + LLS
Sbjct: 15876 FHETGKVHIWDIAPHLRSLDSPGVMVSRKENSPLYTVNRHKTEGYALDW-SPFEYSLLSG 16052
Query: 195 SDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWD 254
+ + + L S G G D+ F H+A VED+ W +++F S + D IWD
Sbjct: 16053 DNANEIFLTKYSNG---GWQTDSSP-FLSHTAAVEDLQWSPSEKNVFSSCSCDGTFRIWD 16220
Query: 255 TRSNTTSKPSHSVDAHTA-EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------ 307
R N + +V+AH +VN LS+N +LATG+ + ++WDLR+LK
Sbjct: 16221 VR-NKQKTSALTVNAHPGVDVNVLSWNTRVPNLLATGADNGVWSVWDLRSLKSSSSVATP 16397
Query: 308 LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQ----SAEDAEDGPP 362
+ SF+ H+ I+ + W P+ ++++ G D ++++WDLS ++ EE+ +AE +D PP
Sbjct: 16398 VASFKWHRAPIYSIEWHPNEDSVIGVVGADNQISLWDLSVELDEEEQDSRAAEGLQDVPP 16577
Query: 363 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 396
+L+FIH G +I + W+ P I S + I
Sbjct: 16578 QLMFIHMGQ-QEIKEMHWHRQIPGTIVSTAMTGI 16676
Score = 59.7 bits (143), Expect = 5e-07
Identities = 54/183 (29%), Positives = 81/183 (43%), Gaps = 3/183 (1%)
Frame = +1
Query: 165 CNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGH 224
CN H + L W S LLS S D T + D+ ++ +A + F
Sbjct: 34141 CNCVKSFTYHSDKVSCLDWYSKAPSVLLSGSYDKTAKIADL-------RLEEAPSSFQVT 34299
Query: 225 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSE 284
S V E+VAW E+ F D+ + D R+ SK + AH ++CLS NP
Sbjct: 34300 SDV-ENVAWDQHSENNFFIGTDNGIVYYCDARN--LSKSVWQLQAHDGPISCLSVNPSVP 34470
Query: 285 FILATGSADKTVALWDLRNLKLKL-HSFESHKDEIFQVHWSPHNETI--LASSGTDRRLN 341
+ATGS D+ V LW+ + K+ S + +F ++ T LA+SG+ +
Sbjct: 34471 SFVATGSTDRVVKLWNTSDSSPKMVVSRDLDVGRVFTCSFTTDESTAFHLAASGSKGVVR 34650
Query: 342 VWD 344
VWD
Sbjct: 34651 VWD 34659
Score = 54.7 bits (130), Expect = 2e-05
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 2/234 (0%)
Frame = +1
Query: 174 HQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAW 233
H LS N N L+S S D T+ LWD+S + FT HS V + W
Sbjct: 34039 HTDAVLALSSNRNAHNLLVSGSADTTLKLWDLST-------CNCVKSFTYHSDKVSCLDW 34197
Query: 234 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 293
+ S+ S + D+ I D R S V T++V ++++ +SE G+ +
Sbjct: 34198 YSKAPSVLLSGSYDKTAKIADLRLEEAPS-SFQV---TSDVENVAWDQHSENNFFIGTDN 34365
Query: 294 KTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 353
V D RNL + ++H I + +P + +A+ TDR + +W+ S
Sbjct: 34366 GIVYYCDARNLSKSVWQLQAHDGPISCLSVNPSVPSFVATGSTDRVVKLWNTS------- 34524
Query: 354 AEDAEDGPPELLFIHGGHTAKISDFSWNPNE--PWVICSVSEDNIMQIWQMAEN 405
D P+++ ++ S+ +E + + + ++++W A N
Sbjct: 34525 -----DSSPKMVVSRDLDVGRVFTCSFTTDESTAFHLAASGSKGVVRVWDTATN 34671
>gb|AE003785.2|AE003785 Drosophila melanogaster genomic scaffold 142000013386052 section 4 of 5,
complete sequence
Length = 296202
Score = 128 bits (322), Expect = 9e-28
Identities = 109/380 (28%), Positives = 173/380 (44%), Gaps = 29/380 (7%)
Frame = +1
Query: 42 PSLTVQWLPDVSRPEGKDYALH-WLVLGTHTSDEQ-NHLVVARVQIPNDDQFDTSQYDSE 99
P L+ +PD + + + ++V GT S N+L+V ++ + Q + D E
Sbjct: 106129 PCLSFDVIPDELGSGRQSFPMTAYIVAGTQASRAHVNNLIVMKMSNLHKTQDNDGDEDEE 106308
Query: 100 KGEFGGFGSVTGKIE------TEIKINHEGEVNRARYMPQ-NPYIIATKTPSADVLVFDY 152
+ VT + E T + H+G VNR R N A+ + V ++D
Sbjct: 106309 LED--DQDDVTDREELKKPQMTCALVKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDL 106482
Query: 153 TK--------HPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWD 204
T+ +K E P GHQ+EG+ + W+ + G L + + +W
Sbjct: 106483 TQPLQAVENAQLAKQYEQSEARPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWT 106662
Query: 205 ISAGPKEGKI--VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSK 262
P E VD + + GHS VED+ W S+ S + D+ + IWD R++
Sbjct: 106663 ----PVEDGTWKVDQRPL-AGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKA 106827
Query: 263 PSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK--LHSFESHKDEIF 319
+ DAH ++VN +S+N FI A+G D + +WDLR + K + +F+ H D I
Sbjct: 106828 CMLTCEDAHQSDVNVISWNRNEPFI-ASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHIT 107004
Query: 320 QVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG-------PPELLFIHGGHT 372
V WSP T+LAS G D ++ +WDL+ + A D PP+LLFIH G
Sbjct: 107005 TVEWSPAEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQ- 107181
Query: 373 AKISDFSWNPNEPWVICSVS 392
+I + W+P P V+ S +
Sbjct: 107182 KEIKELHWHPQLPGVLLSTA 107241
Score = 50.4 bits (119), Expect = 3e-04
Identities = 27/91 (29%), Positives = 42/91 (45%)
Frame = +1
Query: 310 SFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHG 369
+F H+ E F + WSP + +LA+ R ++VW E + P
Sbjct: 106558 TFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWT----PVEDGTWKVDQRPL------A 106707
Query: 370 GHTAKISDFSWNPNEPWVICSVSEDNIMQIW 400
GH+ + D W+PNE V+ S S D ++IW
Sbjct: 106708 GHSQSVEDLQWSPNERSVLASCSVDKTIRIW 106800
>gb|AC007054.24|AC007054 Drosophila melanogaster, chromosome 2R, region 41E-41E, BAC clone
BACR45O18, complete sequence
Length = 176510
Score = 128 bits (322), Expect = 9e-28
Identities = 109/380 (28%), Positives = 173/380 (44%), Gaps = 29/380 (7%)
Frame = +1
Query: 42 PSLTVQWLPDVSRPEGKDYALH-WLVLGTHTSDEQ-NHLVVARVQIPNDDQFDTSQYDSE 99
P L+ +PD + + + ++V GT S N+L+V ++ + Q + D E
Sbjct: 80590 PCLSFDVIPDELGSGRQSFPMTAYIVAGTQASRAHVNNLIVMKMSNLHKTQDNDGDEDEE 80769
Query: 100 KGEFGGFGSVTGKIE------TEIKINHEGEVNRARYMPQ-NPYIIATKTPSADVLVFDY 152
+ VT + E T + H+G VNR R N A+ + V ++D
Sbjct: 80770 LED--DQDDVTDREELKKPQMTCALVKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDL 80943
Query: 153 TK--------HPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWD 204
T+ +K E P GHQ+EG+ + W+ + G L + + +W
Sbjct: 80944 TQPLQAVENAQLAKQYEQSEARPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWT 81123
Query: 205 ISAGPKEGKI--VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSK 262
P E VD + + GHS VED+ W S+ S + D+ + IWD R++
Sbjct: 81124 ----PVEDGTWKVDQRPL-AGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKA 81288
Query: 263 PSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK--LHSFESHKDEIF 319
+ DAH ++VN +S+N FI A+G D + +WDLR + K + +F+ H D I
Sbjct: 81289 CMLTCEDAHQSDVNVISWNRNEPFI-ASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHIT 81465
Query: 320 QVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG-------PPELLFIHGGHT 372
V WSP T+LAS G D ++ +WDL+ + A D PP+LLFIH G
Sbjct: 81466 TVEWSPAEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQ- 81642
Query: 373 AKISDFSWNPNEPWVICSVS 392
+I + W+P P V+ S +
Sbjct: 81643 KEIKELHWHPQLPGVLLSTA 81702
Score = 50.4 bits (119), Expect = 3e-04
Identities = 27/91 (29%), Positives = 42/91 (45%)
Frame = +1
Query: 310 SFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHG 369
+F H+ E F + WSP + +LA+ R ++VW E + P
Sbjct: 81019 TFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWT----PVEDGTWKVDQRPL------A 81168
Query: 370 GHTAKISDFSWNPNEPWVICSVSEDNIMQIW 400
GH+ + D W+PNE V+ S S D ++IW
Sbjct: 81169 GHSQSVEDLQWSPNERSVLASCSVDKTIRIW 81261
>gb|AY071477.1| Drosophila melanogaster RE55020 full length cDNA
Length = 1544
Score = 128 bits (322), Expect = 9e-28
Identities = 109/380 (28%), Positives = 173/380 (44%), Gaps = 29/380 (7%)
Frame = +3
Query: 42 PSLTVQWLPDVSRPEGKDYALH-WLVLGTHTSDEQ-NHLVVARVQIPNDDQFDTSQYDSE 99
P L+ +PD + + + ++V GT S N+L+V ++ + Q + D E
Sbjct: 303 PCLSFDVIPDELGSGRQSFPMTAYIVAGTQASRAHVNNLIVMKMSNLHKTQDNDGDEDEE 482
Query: 100 KGEFGGFGSVTGKIE------TEIKINHEGEVNRARYMPQ-NPYIIATKTPSADVLVFDY 152
+ VT + E T + H+G VNR R N A+ + V ++D
Sbjct: 483 LED--DQDDVTDREELKKPQMTCALVKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDL 656
Query: 153 TK--------HPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWD 204
T+ +K E P GHQ+EG+ + W+ + G L + + +W
Sbjct: 657 TQPLQAVENAQLAKQYEQSEARPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWT 836
Query: 205 ISAGPKEGKI--VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSK 262
P E VD + + GHS VED+ W S+ S + D+ + IWD R++
Sbjct: 837 ----PVEDGTWKVDQRPL-AGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKA 1001
Query: 263 PSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK--LHSFESHKDEIF 319
+ DAH ++VN +S+N FI A+G D + +WDLR + K + +F+ H D I
Sbjct: 1002CMLTCEDAHQSDVNVISWNRNEPFI-ASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHIT 1178
Query: 320 QVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG-------PPELLFIHGGHT 372
V WSP T+LAS G D ++ +WDL+ + A D PP+LLFIH G
Sbjct: 1179TVEWSPAEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQ- 1355
Query: 373 AKISDFSWNPNEPWVICSVS 392
+I + W+P P V+ S +
Sbjct: 1356KEIKELHWHPQLPGVLLSTA 1415
Score = 50.4 bits (119), Expect = 3e-04
Identities = 27/91 (29%), Positives = 42/91 (45%)
Frame = +3
Query: 310 SFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHG 369
+F H+ E F + WSP + +LA+ R ++VW E + P
Sbjct: 732 TFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWT----PVEDGTWKVDQRPL------A 881
Query: 370 GHTAKISDFSWNPNEPWVICSVSEDNIMQIW 400
GH+ + D W+PNE V+ S S D ++IW
Sbjct: 882 GHSQSVEDLQWSPNERSVLASCSVDKTIRIW 974
>emb|Z48622.1|SC9553 S.cerevisiae chromosome XIII cosmid 9553
Length = 16279
Score = 120 bits (302), Expect = 2e-25
Identities = 101/409 (24%), Positives = 180/409 (43%), Gaps = 35/409 (8%)
Frame = -1
Query: 28 PFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLGTHTSD--EQNHLVV----- 80
P +Y+++ + WP LT+ +PD E ++Y L+ S ++N L+V
Sbjct: 15475 PTVYEMLHNVNMPWPCLTLDVIPDTLGSERRNYPQSILLTTATQSSRKKENELMVLALSN 15296
Query: 81 -ARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMP----QNP 135
A+ + +D++ + + D E V IE E I NR + P
Sbjct: 15295 LAKTLLKDDNEGEDDEEDDED-------DVDPVIENE-NIPLRDTTNRLKVSPFAISNQE 15140
Query: 136 YIIATKTPSADVLVFDYTKH------PSKPDPSGECNPDLRLRGHQK-EGYGLSWNSNLK 188
+ AT + + DV +++ P P P ++ H EGYGL W+ +K
Sbjct: 15139 VLTATMSENGDVYIYNLAPQSKAFSTPGYQIPKSAKRPIHTVKNHGNVEGYGLDWSPLIK 14960
Query: 189 GHLLSASDDHTVCLWDISAGPKEGK--IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVAD 246
L + D C I + + D + ++ +ED+ W ++F +
Sbjct: 14959 TGALLSGD----CSGQIYFTQRHTSRWVTDKQPFTVSNNKSIEDIQWSRTESTVFATAGC 14792
Query: 247 DQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK- 305
D + IWDTRS KP+ SV A +VN +S++ ++LA+G + T +WDLR
Sbjct: 14791 DGYIRIWDTRSK-KHKPAISVKASNTDVNVISWSDKIGYLLASGDDNGTWGVWDLRQFTP 14615
Query: 306 ------LKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE-----EQSA 354
+ ++ HK I + ++P +E+I+A D + +WDLS + +Q+A
Sbjct: 14614 SNADAVQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNTVTLWDLSVEADDEEIKQQAA 14435
Query: 355 E--DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 401
E + ++ PP+LLF+H ++ D W+ P + S D + +W+
Sbjct: 14434 ETKELQEIPPQLLFVH--WQKEVKDVKWHKQIPGCLVSTGTDG-LNVWK 14297
>gb|BC008121.1|BC008121 Mus musculus, Similar to glutamate rich WD repeat protein GRWD,
clone IMAGE:3498842, mRNA, partial cds
Length = 1907
Score = 118 bits (296), Expect = 9e-25
Identities = 72/241 (29%), Positives = 114/241 (46%), Gaps = 8/241 (3%)
Frame = +1
Query: 160 DPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKA 219
D P GH EG+ L W+ + G LL+ V LW + G VD +
Sbjct: 580 DEQARIKPIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWN--VDQRP 753
Query: 220 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS-HSVDAHTAEVNCLS 278
F GH+ VED+ W +++F S + D + IWD R+ + AH +VN +S
Sbjct: 754 -FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVIS 930
Query: 279 FNPYSEFILATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVHWSPHNETILASSGT 336
++ F+L+ G D + +WDLR K + +F+ H + V W P + + A+SG
Sbjct: 931 WSRREPFLLSGGD-DGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGA 1107
Query: 337 DRRLNVWDLSKIGEEQSAEDAEDG-----PPELLFIHGGHTAKISDFSWNPNEPWVICSV 391
D ++ WDL+ + +S E D P +LLF+H G T + + W+P P V+ S
Sbjct: 1108DNQITQWDLAVERDPESGETETDPGLAALPQQLLFVHQGET-DLKELHWHPQCPGVLIST 1284
Query: 392 S 392
+
Sbjct: 1285A 1287
Score = 44.3 bits (103), Expect = 0.022
Identities = 26/95 (27%), Positives = 44/95 (45%)
Frame = +1
Query: 308 LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI 367
+ SF H E F + WSP L + + +++W ++ G + + + P F+
Sbjct: 604 IFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEGG----SWNVDQRP----FV 759
Query: 368 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
GHT + D W+P E V S S D ++IW +
Sbjct: 760 --GHTRSVEDLQWSPTEDTVFASCSADASIRIWDI 858
>ref|NM_065690.1| Caenorhabditis elegans
Length = 1362
Score = 117 bits (294), Expect = 2e-24
Identities = 98/391 (25%), Positives = 167/391 (42%), Gaps = 24/391 (6%)
Frame = +1
Query: 28 PFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALH-WLVLGTHTSDEQNHLVVA----- 81
P Y L + +WP L+ + D + ++V GT +++ ++
Sbjct: 181 PSAYKLFHSFNSDWPCLSFDVVKDGLGENRTQFPAECYIVSGTQADKPRDNEIIVMGLKN 360
Query: 82 -----RVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARY-MPQNP 135
+ + D DTS+ +SE + K+ + I H G +NR R +
Sbjct: 361 LTTMRKEKENKGDDSDTSEDESEDEDAEEEKKREPKMHA-VSIPHYGGINRIRSDRLGDS 537
Query: 136 YIIATKTPSADVLVFDYT---------KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSN 186
+ A + V V++ T SK + P G KEGYGL+W+S
Sbjct: 538 TVCACWSDQGRVQVWNITDALNYTHGMSGESKTEVQKIDRPLFTNNGSGKEGYGLAWSSL 717
Query: 187 LKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVAD 246
G L + + LW + G G+ TGH VED+AW L S +
Sbjct: 718 KTGDLATGDIIKKIYLWQMKEG---GQWAVGANPLTGHKKSVEDLAWSPTETGLLASCSA 888
Query: 247 DQKLMIWDTRSNTTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 305
D + +WDTRS +V AH ++VN +S+N + E ++ +G D + +W L+ ++
Sbjct: 889 DGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRH-ENLIVSGGDDGELKIWSLKTIQ 1065
Query: 306 L--KLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPE 363
+ F+ H I V W PH T +SG D + +WD++ + Q+ + E PP+
Sbjct: 1066FGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWDIATEADGQT--NIEGVPPQ 1239
Query: 364 LLFIHGGHTAKISDFSWNPNEPWVICSVSED 394
L+F+H G ++ + W+ P + + S D
Sbjct: 1240LMFVHMGQN-EVKEVHWHQQIPGLAINTSID 1329
>gb|AF337808.1|AF337808 Homo sapiens glutamate rich WD repeat protein (GRWD) mRNA, complete
cds
Length = 2240
Score = 117 bits (293), Expect = 2e-24
Identities = 69/241 (28%), Positives = 117/241 (47%), Gaps = 8/241 (3%)
Frame = +1
Query: 160 DPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKA 219
D + P GH EG+ L W+ + G LL+ + LW + G VD +
Sbjct: 607 DEQAQMKPIFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWH--VDQRP 780
Query: 220 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSK-PSHSVDAHTAEVNCLS 278
F GH+ VED+ W ++F S + D + IWD R+ + + AH +VN +S
Sbjct: 781 -FVGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVIS 957
Query: 279 FNPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVHWSPHNETILASSGT 336
++ F+L +G D + +WDLR K + +F+ H + V W P + + A+SG
Sbjct: 958 WSRREPFLL-SGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGA 1134
Query: 337 DRRLNVWDLS-----KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 391
D ++ WDL+ + G+ ++ D P +LLF+H G T ++ + W+P P ++ S
Sbjct: 1135DHQITQWDLAVERDPEAGDVEADPGLADLPQQLLFVHQGET-ELKELHWHPQCPGLLVST 1311
Query: 392 S 392
+
Sbjct: 1312A 1314
Score = 42.7 bits (99), Expect = 0.063
Identities = 26/95 (27%), Positives = 40/95 (41%)
Frame = +1
Query: 308 LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI 367
+ SF H E F + WSP L + + +++W + G D P +
Sbjct: 631 IFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHV-----DQRPFV--- 786
Query: 368 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
GHT + D W+P E V S S D ++IW +
Sbjct: 787 --GHTRSVEDLQWSPTENTVFASCSADASIRIWDI 885
>ref|NM_031485.1| Homo sapiens glutamate rich WD repeat protein GRWD (GRWD), mRNA
Length = 2262
Score = 117 bits (293), Expect = 2e-24
Identities = 69/241 (28%), Positives = 117/241 (47%), Gaps = 8/241 (3%)
Frame = +3
Query: 160 DPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKA 219
D + P GH EG+ L W+ + G LL+ + LW + G VD +
Sbjct: 612 DEQAQMKPIFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWH--VDQRP 785
Query: 220 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSK-PSHSVDAHTAEVNCLS 278
F GH+ VED+ W ++F S + D + IWD R+ + + AH +VN +S
Sbjct: 786 -FVGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVIS 962
Query: 279 FNPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVHWSPHNETILASSGT 336
++ F+L +G D + +WDLR K + +F+ H + V W P + + A+SG
Sbjct: 963 WSRREPFLL-SGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGA 1139
Query: 337 DRRLNVWDLS-----KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 391
D ++ WDL+ + G+ ++ D P +LLF+H G T ++ + W+P P ++ S
Sbjct: 1140DHQITQWDLAVERDPEAGDVEADPGLADLPQQLLFVHQGET-ELKELHWHPQCPGLLVST 1316
Query: 392 S 392
+
Sbjct: 1317A 1319
Score = 42.7 bits (99), Expect = 0.063
Identities = 26/95 (27%), Positives = 40/95 (41%)
Frame = +3
Query: 308 LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI 367
+ SF H E F + WSP L + + +++W + G D P +
Sbjct: 636 IFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHV-----DQRPFV--- 791
Query: 368 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
GHT + D W+P E V S S D ++IW +
Sbjct: 792 --GHTRSVEDLQWSPTENTVFASCSADASIRIWDI 890
>gb|BC002440.1|BC002440 Homo sapiens, Similar to CG12792 gene product, clone MGC:2600
IMAGE:3347366, mRNA, complete cds
Length = 2262
Score = 117 bits (293), Expect = 2e-24
Identities = 69/241 (28%), Positives = 117/241 (47%), Gaps = 8/241 (3%)
Frame = +3
Query: 160 DPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKA 219
D + P GH EG+ L W+ + G LL+ + LW + G VD +
Sbjct: 612 DEQAQMKPIFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWH--VDQRP 785
Query: 220 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSK-PSHSVDAHTAEVNCLS 278
F GH+ VED+ W ++F S + D + IWD R+ + + AH +VN +S
Sbjct: 786 -FVGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVIS 962
Query: 279 FNPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVHWSPHNETILASSGT 336
++ F+L +G D + +WDLR K + +F+ H + V W P + + A+SG
Sbjct: 963 WSRREPFLL-SGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGA 1139
Query: 337 DRRLNVWDLS-----KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 391
D ++ WDL+ + G+ ++ D P +LLF+H G T ++ + W+P P ++ S
Sbjct: 1140DHQITQWDLAVERDPEAGDVEADPGLADLPQQLLFVHQGET-ELKELHWHPQCPGLLVST 1316
Query: 392 S 392
+
Sbjct: 1317A 1319
Score = 42.7 bits (99), Expect = 0.063
Identities = 26/95 (27%), Positives = 40/95 (41%)
Frame = +3
Query: 308 LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI 367
+ SF H E F + WSP L + + +++W + G D P +
Sbjct: 636 IFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHV-----DQRPFV--- 791
Query: 368 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
GHT + D W+P E V S S D ++IW +
Sbjct: 792 --GHTRSVEDLQWSPTENTVFASCSADASIRIWDI 890
>dbj|D30014.1|RICEN20522 Rice mRNA EN205, partial sequence
Length = 335
Score = 90.1 bits (222), Expect(2) = 2e-24
Identities = 43/63 (68%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = +2
Query: 342 VWDLSKIGEEQSAED-AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 400
VWDLSK+ S AEDGPPELL IHGGHT+KISDFSWNP E +I S +EDNI+QIW
Sbjct: 104 VWDLSKVFPSNSHRSTAEDGPPELLSIHGGHTSKISDFSWNPCEALLIASFAEDNILQIW 283
Query: 401 QMA 403
Q+A
Sbjct: 284 QLA 292
Score = 48.1 bits (113), Expect(2) = 2e-24
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +1
Query: 308 LHSFESHKDEIFQVHWSPHNETILASSGTDRRL 340
LH+F+ HK+E FQV WSP NETILAS RRL
Sbjct: 1 LHTFDCHKEEAFQVGWSPKNETILASCCLGRRL 99
>gb|M21696.1|YSCPPG S.cerevisiae phosphoglucoisomerase 1 (PGI1) gene, complete cds
Length = 3791
Score = 104 bits (260), Expect = 1e-20
Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 27/261 (10%)
Frame = +3
Query: 16 ISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLGTHTSD-- 73
+ E Y WKKNT LYD + T++ +WPSLT Q+ PD+ + H ++L + TS
Sbjct: 3006 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDE----HRILLSSFTSSQK 3173
Query: 74 -EQNHLVVARVQIPNDDQFDT-SQYDSEKGEFGGFGSV---TGKIETEIKINH-EGEVNR 127
E + ++++ ++ + + +D ++ EF S + + +I I GE NR
Sbjct: 3174 PEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNR 3353
Query: 128 ARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNP--DLRLRGHQ---------- 175
ARY+PQNP IIA + + +FD TKH S + + + +L G
Sbjct: 3354 ARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMD 3533
Query: 176 ------KEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAI-FTGHSAVV 228
E L+WN + LLS+ + V LWDI E I+D + V
Sbjct: 3534 TSSADINEATSLAWNLQQEALLLSSHSNGQVQLWDIKQYSHENPIIDLPLVSINSDGTAV 3713
Query: 229 EDVAWHLLHESLFGSVADDQK 249
DV W H+SLF + ++ +
Sbjct: 3714 NDVTWMPTHDSLFAACTEEMR 3776
>ref|NM_102666.1| peroxisomal targeting signal type 2 receptor
Length = 1184
Score = 92.4 bits (228), Expect = 7e-17
Identities = 66/243 (27%), Positives = 106/243 (43%)
Frame = +2
Query: 159 PDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAK 218
P PS NP + H +E + +N + L++S D TV LW + +
Sbjct: 326 PPPS---NPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPA-------SV 475
Query: 219 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLS 278
F H+ V W+ H +F S + D L IWD R ++ + AH E+
Sbjct: 476 RTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTM---IIPAHDFEILSCD 646
Query: 279 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDR 338
+N Y + ILAT S DKTV +WD+R+ ++ L H + +V +SPH +++AS D
Sbjct: 647 WNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDM 826
Query: 339 RLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 398
+ +WD EDA L+ + HT + ++ S D ++
Sbjct: 827 SVCLWD-------YMVEDA------LVGRYDHHTEFAVGIDMSVLVEGLMASTGWDELVY 967
Query: 399 IWQ 401
+WQ
Sbjct: 968 VWQ 976
Score = 76.6 bits (187), Expect = 4e-12
Identities = 45/175 (25%), Positives = 75/175 (42%)
Frame = +2
Query: 228 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFIL 287
V DV W H+S+ + D + I+DT S P S H EV + +NP
Sbjct: 236 VYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSF 415
Query: 288 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
T S D TV LW + + + +F+ H ++Q W+P + + AS+ D L +WD+ +
Sbjct: 416 LTSSWDDTVKLWAM-DRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVRE 592
Query: 348 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
P I H +I WN + ++ + S D +++W +
Sbjct: 593 --------------PGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDV 715
Score = 36.2 bits (82), Expect = 5.9
Identities = 30/144 (20%), Positives = 58/144 (39%), Gaps = 3/144 (2%)
Frame = +2
Query: 264 SHSVDAHTAE-VNCLSFNPYSEFILATGSADKTVALWD--LRNLKLKLHSFESHKDEIFQ 320
+ SV TA+ V + ++ + +L D +V ++D L + SF+ H E+
Sbjct: 203 TESVSYDTADAVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQS 382
Query: 321 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 380
V ++P +S D + +W + + ++ ++ H + W
Sbjct: 383 VDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKE--------------HAYCVYQAVW 520
Query: 381 NPNEPWVICSVSEDNIMQIWQMAE 404
NP V S S D ++IW + E
Sbjct: 521 NPKHGDVFASASGDCTLRIWDVRE 592
>gb|AF130973.1|AF130973 Arabidopsis thaliana peroxisomal targeting signal type 2 receptor
(PEX7) mRNA, complete cds
Length = 1184
Score = 92.4 bits (228), Expect = 7e-17
Identities = 66/243 (27%), Positives = 106/243 (43%)
Frame = +2
Query: 159 PDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAK 218
P PS NP + H +E + +N + L++S D TV LW + +
Sbjct: 326 PPPS---NPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPA-------SV 475
Query: 219 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLS 278
F H+ V W+ H +F S + D L IWD R ++ + AH E+
Sbjct: 476 RTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTM---IIPAHDFEILSCD 646
Query: 279 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDR 338
+N Y + ILAT S DKTV +WD+R+ ++ L H + +V +SPH +++AS D
Sbjct: 647 WNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDM 826
Query: 339 RLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 398
+ +WD EDA L+ + HT + ++ S D ++
Sbjct: 827 SVCLWD-------YMVEDA------LVGRYDHHTEFAVGIDMSVLVEGLMASTGWDELVY 967
Query: 399 IWQ 401
+WQ
Sbjct: 968 VWQ 976
Score = 76.3 bits (186), Expect = 5e-12
Identities = 45/175 (25%), Positives = 75/175 (42%)
Frame = +2
Query: 228 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFIL 287
V DV W H+S+ + D + I+DT S P S H EV + +NP
Sbjct: 236 VYDVCWSESHDSVLIAANGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSF 415
Query: 288 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
T S D TV LW + + + +F+ H ++Q W+P + + AS+ D L +WD+ +
Sbjct: 416 LTSSWDDTVKLWAM-DRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVRE 592
Query: 348 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
P I H +I WN + ++ + S D +++W +
Sbjct: 593 --------------PGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDV 715
Score = 37.4 bits (85), Expect = 2.6
Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 3/144 (2%)
Frame = +2
Query: 264 SHSVDAHTAE-VNCLSFNPYSEFILATGSADKTVALWD--LRNLKLKLHSFESHKDEIFQ 320
+ SV TA+ V + ++ + +L + D +V ++D L + SF+ H E+
Sbjct: 203 TESVSYDTADAVYDVCWSESHDSVLIAANGDGSVKIYDTALPPPSNPIRSFQEHAREVQS 382
Query: 321 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 380
V ++P +S D + +W + + ++ ++ H + W
Sbjct: 383 VDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKE--------------HAYCVYQAVW 520
Query: 381 NPNEPWVICSVSEDNIMQIWQMAE 404
NP V S S D ++IW + E
Sbjct: 521 NPKHGDVFASASGDCTLRIWDVRE 592
>gb|AC021043.4|AC021043 Arabidopsis thaliana chromosome I BAC F28N24 genomic sequence, complete
sequence
Length = 154716
Score = 92.4 bits (228), Expect = 7e-17
Identities = 66/243 (27%), Positives = 106/243 (43%)
Frame = -3
Query: 159 PDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAK 218
P PS NP + H +E + +N + L++S D TV LW + +
Sbjct: 38191 PPPS---NPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPA-------SV 38042
Query: 219 AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLS 278
F H+ V W+ H +F S + D L IWD R ++ + AH E+
Sbjct: 38041 RTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTM---IIPAHDFEILSCD 37871
Query: 279 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDR 338
+N Y + ILAT S DKTV +WD+R+ ++ L H + +V +SPH +++AS D
Sbjct: 37870 WNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDM 37691
Query: 339 RLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 398
+ +WD EDA L+ + HT + ++ S D ++
Sbjct: 37690 SVCLWD-------YMVEDA------LVGRYDHHTEFAVGIDMSVLVEGLMASTGWDELVY 37550
Query: 399 IWQ 401
+WQ
Sbjct: 37549 VWQ 37541
Score = 76.6 bits (187), Expect = 4e-12
Identities = 45/175 (25%), Positives = 75/175 (42%)
Frame = -3
Query: 228 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFIL 287
V DV W H+S+ + D + I+DT S P S H EV + +NP
Sbjct: 38281 VYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSF 38102
Query: 288 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
T S D TV LW + + + +F+ H ++Q W+P + + AS+ D L +WD+ +
Sbjct: 38101 LTSSWDDTVKLWAM-DRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVRE 37925
Query: 348 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
P I H +I WN + ++ + S D +++W +
Sbjct: 37924 --------------PGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDV 37802
Score = 36.2 bits (82), Expect = 5.9
Identities = 30/144 (20%), Positives = 58/144 (39%), Gaps = 3/144 (2%)
Frame = -3
Query: 264 SHSVDAHTAE-VNCLSFNPYSEFILATGSADKTVALWD--LRNLKLKLHSFESHKDEIFQ 320
+ SV TA+ V + ++ + +L D +V ++D L + SF+ H E+
Sbjct: 38314 TESVSYDTADAVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQS 38135
Query: 321 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 380
V ++P +S D + +W + + ++ ++ H + W
Sbjct: 38134 VDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKE--------------HAYCVYQAVW 37997
Query: 381 NPNEPWVICSVSEDNIMQIWQMAE 404
NP V S S D ++IW + E
Sbjct: 37996 NPKHGDVFASASGDCTLRIWDVRE 37925
>gb|AF430070.1|AF430070 Gossypium hirsutum peroxisomal targeting signal 2 receptor mRNA,
complete cds
Length = 1314
Score = 90.9 bits (224), Expect = 2e-16
Identities = 51/184 (27%), Positives = 86/184 (46%)
Frame = +3
Query: 161 PSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAI 220
P NP L+ H +E +GL +N + LSAS D +V LW + +
Sbjct: 351 PPPHSNPLRSLKEHAREVHGLDYNPTRRDSFLSASLDDSVKLWTLDRPA-------SLRT 509
Query: 221 FTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFN 280
F H+ V VAW+ H +F S + D + IWD R ++ + H E+ +N
Sbjct: 510 FREHAYCVYSVAWNPKHADVFASASGDCTVRIWDVREPGSTM---IIPGHEHEILSCDWN 680
Query: 281 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRL 340
E ++A+ S DK++ +WD+RN ++ + H + + +SPH ++ S D +
Sbjct: 681 KCDECLIASASVDKSIKIWDVRNYRVPVSVLNGHGYAVRKFKFSPHRRNLIVSCSYDMTV 860
Query: 341 NVWD 344
+WD
Sbjct: 861 CLWD 872
Score = 82.4 bits (202), Expect = 7e-14
Identities = 49/175 (28%), Positives = 78/175 (44%)
Frame = +3
Query: 228 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFIL 287
V DVAW H+S+ + D + ++DT S P S+ H EV+ L +NP
Sbjct: 264 VYDVAWSESHDSVLVAAVADGSIKVYDTAPPPHSNPLRSLKEHAREVHGLDYNPTRRDSF 443
Query: 288 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
+ S D +V LW L + L +F H ++ V W+P + + AS+ D + +WD+ +
Sbjct: 444 LSASLDDSVKLWTL-DRPASLRTFREHAYCVYSVAWNPKHADVFASASGDCTVRIWDVRE 620
Query: 348 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
P I GH +I WN + +I S S D ++IW +
Sbjct: 621 --------------PGSTMIIPGHEHEILSCDWNKCDECLIASASVDKSIKIWDV 743
Score = 68.9 bits (167), Expect = 8e-10
Identities = 46/172 (26%), Positives = 74/172 (42%)
Frame = +3
Query: 172 RGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDV 231
R H Y ++WN SAS D TV +WD+ + + I GH +
Sbjct: 513 REHAYCVYSVAWNPKHADVFASASGDCTVRIWDV-------REPGSTMIIPGHEHEILSC 671
Query: 232 AWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 291
W+ E L S + D+ + IWD R+ P ++ H V F+P+ ++ + S
Sbjct: 672 DWNKCDECLIASASVDKSIKIWDVRNYRV--PVSVLNGHGYAVRKFKFSPHRRNLIVSCS 845
Query: 292 ADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 343
D TV LWD + ++ H + V S + ++AS+G D + VW
Sbjct: 846 YDMTVCLWDFMIEDALVGRYDHHTEFAVGVDLSVLVDGLMASTGWDELVYVW 1001
>gb|AC024818.1| Caenorhabditis elegans cosmid Y54H5A, complete sequence
Length = 22200
Score = 90.5 bits (223), Expect = 3e-16
Identities = 53/178 (29%), Positives = 90/178 (49%), Gaps = 3/178 (1%)
Frame = +3
Query: 220 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-AHTAEVNCLS 278
IF S VED+AW L S + D + +WDTRS +V AH ++VN +S
Sbjct: 17391 IFQYFSESVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVIS 17570
Query: 279 FNPYSEFILATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVHWSPHNETILASSGT 336
+N + E ++ +G D + +W L+ ++ + F+ H I V W PH T +SG
Sbjct: 17571 WNRH-ENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGE 17747
Query: 337 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 394
D + +WD++ + Q+ + E PP+L+F+H G ++ + W+ P + + S D
Sbjct: 17748 DDQTTIWDIATEADGQT--NIEGVPPQLMFVHMGQN-EVKEVHWHQQIPGLAINTSID 17912
Score = 59.7 bits (143), Expect = 5e-07
Identities = 39/181 (21%), Positives = 77/181 (41%), Gaps = 15/181 (8%)
Frame = +3
Query: 181 LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 240
L+W+ G L S S D ++ LWD + PK+ + + H + V ++W+ HE+L
Sbjct: 17424 LAWSPTETGLLASCSADGSIKLWDTRSAPKDACVC---TVQKAHESDVNVISWN-RHENL 17591
Query: 241 FGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 300
S DD +L IW ++ +P H + + + ++P+ D +WD
Sbjct: 17592 IVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWD 17771
Query: 301 ----------LRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTD-----RRLNVWDL 345
+ + +L ++E+ +VHW + ++ D + +N+ D+
Sbjct: 17772 IATEADGQTNIEGVPPQLMFVHMGQNEVKEVHWHQQIPGLAINTSIDGFNVFKTINI*DV 17951
Query: 346 S 346
S
Sbjct: 17952 S 17954
Score = 58.5 bits (140), Expect = 1e-06
Identities = 37/133 (27%), Positives = 64/133 (47%), Gaps = 3/133 (2%)
Frame = +3
Query: 274 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVHWSPHNETI 330
V L+++P +LA+ SAD ++ LWD R+ ++H+ ++ + W+ H E +
Sbjct: 17415 VEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRH-ENL 17591
Query: 331 LASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 390
+ S G D L +W L I + G P LF + H + I+ W+P+E +
Sbjct: 17592 IVSGGDDGELKIWSLKTI---------QFGQPVALFKY--HNSPITSVDWHPHETTTFMA 17738
Query: 391 VSEDNIMQIWQMA 403
ED+ IW +A
Sbjct: 17739 SGEDDQTTIWDIA 17777
Score = 36.6 bits (83), Expect = 4.5
Identities = 21/99 (21%), Positives = 43/99 (43%)
Frame = +3
Query: 304 LKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPE 363
L + + F+ + + + WSP +LAS D + +WD ++
Sbjct: 17373 LSIFQYIFQYFSESVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDAC---------- 17522
Query: 364 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
+ + H + ++ SWN +E +I S +D ++IW +
Sbjct: 17523 VCTVQKAHESDVNVISWNRHEN-LIVSGGDDGELKIWSL 17636
>ref|NM_014409.1| Homo sapiens TAF5-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65 kD (TAF5L), mRNA
Length = 1770
Score = 89.7 bits (221), Expect = 4e-16
Identities = 74/251 (29%), Positives = 119/251 (46%)
Frame = +1
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
LRGH Y + ++ G LLS S+D ++ WD+ + ++ GH+ V D
Sbjct: 1012 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNT-------VLYQGHAYPVWD 1167
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
+ + F S + D+ +W S + P H A+V+C+ F+P S + LATG
Sbjct: 1168 LDISP-YSLYFASGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATG 1332
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 350
S DKTV LW + + F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 1333 STDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLAS--- 1497
Query: 351 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 410
L GHT I+ +++P + +I S S DN +++W + N Y
Sbjct: 1498 -----------GTLYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDI-RNTYCSA 1638
Query: 411 EPDIAAAELEG 421
D +++EL G
Sbjct: 1639 PADGSSSELVG 1671
>gb|AF069736.1|AF069736 Homo sapiens PCAF associated factor 65 beta mRNA, complete cds
Length = 1770
Score = 89.7 bits (221), Expect = 4e-16
Identities = 74/251 (29%), Positives = 119/251 (46%)
Frame = +1
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
LRGH Y + ++ G LLS S+D ++ WD+ + ++ GH+ V D
Sbjct: 1012 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNT-------VLYQGHAYPVWD 1167
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
+ + F S + D+ +W S + P H A+V+C+ F+P S + LATG
Sbjct: 1168 LDISP-YSLYFASGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATG 1332
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 350
S DKTV LW + + F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 1333 STDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLAS--- 1497
Query: 351 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 410
L GHT I+ +++P + +I S S DN +++W + N Y
Sbjct: 1498 -----------GTLYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDI-RNTYCSA 1638
Query: 411 EPDIAAAELEG 421
D +++EL G
Sbjct: 1639 PADGSSSELVG 1671
>emb|AJ009770.1|HSA9770 Homo sapiens mRNA for putative transcription factor, partial
Length = 1981
Score = 89.7 bits (221), Expect = 4e-16
Identities = 74/251 (29%), Positives = 119/251 (46%)
Frame = +1
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
LRGH Y + ++ G LLS S+D ++ WD+ + ++ GH+ V D
Sbjct: 25 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNT-------VLYQGHAYPVWD 180
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
+ + F S + D+ +W S + P H A+V+C+ F+P S + LATG
Sbjct: 181 LDISP-YSLYFASGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATG 345
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 350
S DKTV LW + + F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 346 STDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLAS--- 510
Query: 351 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 410
L GHT I+ +++P + +I S S DN +++W + N Y
Sbjct: 511 -----------GTLYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDI-RNTYCSA 651
Query: 411 EPDIAAAELEG 421
D +++EL G
Sbjct: 652 PADGSSSELVG 684
>ref|XM_050783.1| Homo sapiens similar to TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor, 65
kD (H. sapiens) (LOC146638), mRNA
Length = 1050
Score = 89.7 bits (221), Expect = 4e-16
Identities = 74/251 (29%), Positives = 119/251 (46%)
Frame = +1
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
LRGH Y + ++ G LLS S+D ++ WD+ + ++ GH+ V D
Sbjct: 25 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNT-------VLYQGHAYPVWD 180
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
+ + F S + D+ +W S + P H A+V+C+ F+P S + LATG
Sbjct: 181 LDISP-YSLYFASGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATG 345
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 350
S DKTV LW + + F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 346 STDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLAS--- 510
Query: 351 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 410
L GHT I+ +++P + +I S S DN +++W + N Y
Sbjct: 511 -----------GTLYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDI-RNTYCSA 651
Query: 411 EPDIAAAELEG 421
D +++EL G
Sbjct: 652 PADGSSSELVG 684
>ref|XM_001872.3| Homo sapiens TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor, 65 kD (TAF5L), mRNA
Length = 1959
Score = 89.7 bits (221), Expect = 4e-16
Identities = 74/251 (29%), Positives = 119/251 (46%)
Frame = +1
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
LRGH Y + ++ G LLS S+D ++ WD+ + ++ GH+ V D
Sbjct: 25 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNT-------VLYQGHAYPVWD 180
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
+ + F S + D+ +W S + P H A+V+C+ F+P S + LATG
Sbjct: 181 LDISP-YSLYFASGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATG 345
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 350
S DKTV LW + + F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 346 STDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLAS--- 510
Query: 351 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 410
L GHT I+ +++P + +I S S DN +++W + N Y
Sbjct: 511 -----------GTLYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDI-RNTYCSA 651
Query: 411 EPDIAAAELEG 421
D +++EL G
Sbjct: 652 PADGSSSELVG 684
>dbj|AP003593.1|AP003593 Nostoc sp. PCC 7120 DNA, complete genome, section 13/19
Length = 333550
Score = 89.4 bits (220), Expect = 6e-16
Identities = 65/213 (30%), Positives = 111/213 (51%)
Frame = +3
Query: 191 LLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 250
L S S D TV LWDIS+ I GH++ V V ++ S S + DQ +
Sbjct: 66021 LASGSGDQTVRLWDISSSK-------CLYILQGHTSWVNSVVFNP-DGSTLASGSSDQTV 66176
Query: 251 MIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 310
+W+ S SK + HT+ VN + FNP +LA+GS+DKTV LWD+ + K LH+
Sbjct: 66177 RLWEINS---SKCLCTFQGHTSWVNSVVFNPDGS-MLASGSSDKTVRLWDISSSKC-LHT 66341
Query: 311 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGG 370
F+ H + + V ++P + ++LAS D+ + +W++S + L G
Sbjct: 66342 FQGHTNWVNSVAFNP-DGSMLASGSGDQTVRLWEISS--------------SKCLHTFQG 66476
Query: 371 HTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
HT+ +S +++P + ++ S S+D +++W ++
Sbjct: 66477 HTSWVSSVTFSP-DGTMLASGSDDQTVRLWSIS 66572
Score = 85.9 bits (211), Expect = 6e-15
Identities = 62/212 (29%), Positives = 107/212 (50%)
Frame = +3
Query: 191 LLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 250
L S SDD TV LWDIS+G + GH++ V V + ++ S DDQ +
Sbjct: 65643 LASGSDDQTVRLWDISSG-------NCLYTLQGHTSCVRSVVFS-PDGAMLASGGDDQIV 65798
Query: 251 MIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 310
+WD S +++ +T+ V L F+P + LA GS+D+ V LWD+ + K L++
Sbjct: 65799 RLWDISSGNC---LYTLQGYTSWVRFLVFSP-NGVTLANGSSDQIVRLWDISSKKC-LYT 65963
Query: 311 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGG 370
+ H + + V +SP T+ + SG D+ + +WD+S + L+I G
Sbjct: 65964 LQGHTNWVNAVAFSPDGATLASGSG-DQTVRLWDISS--------------SKCLYILQG 66098
Query: 371 HTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
HT+ ++ +NP+ + S S D +++W++
Sbjct: 66099 HTSWVNSVVFNPDGS-TLASGSSDQTVRLWEI 66191
Score = 77.4 bits (189), Expect = 2e-12
Identities = 64/235 (27%), Positives = 111/235 (47%)
Frame = +3
Query: 169 LRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVV 228
L +GH + ++ + K L S SDD TV LWDIS+G F GH++ V
Sbjct: 65202 LTCKGHNSWVNSVGFSQDGK-MLASGSDDQTVRLWDISSG-------QCLKTFKGHTSRV 65357
Query: 229 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILA 288
V + + + S + DQ + +WD S + + HT V ++FN +LA
Sbjct: 65358 RSVVFS-PNSLMLASGSSDQTVRLWDISS---GECLYIFQGHTGWVYSVAFN-LDGSMLA 65522
Query: 289 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 348
TGS D+TV LWD+ + + + F+ H + V +S + +LAS D+ + +WD+S
Sbjct: 65523 TGSGDQTVRLWDISSSQC-FYIFQGHTSCVRSVVFS-SDGAMLASGSDDQTVRLWDISS- 65693
Query: 349 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
L+ GHT+ + ++P+ ++ S +D I+++W ++
Sbjct: 65694 -------------GNCLYTLQGHTSCVRSVVFSPDGA-MLASGGDDQIVRLWDIS 65816
Score = 62.0 bits (149), Expect = 1e-07
Identities = 50/160 (31%), Positives = 82/160 (51%)
Frame = +3
Query: 191 LLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 250
L S SDD TV LW IS+G + F GH+ V V + ++ S + DQ +
Sbjct: 66525 LASGSDDQTVRLWSISSG-------ECLYTFLGHTNWVGSVIFS-PDGAILASGSGDQTV 66680
Query: 251 MIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 310
+W S ++ K +++ H V + F+P +LA+GS D+TV LW++ + + L++
Sbjct: 66681 RLW---SISSGKCLYTLQGHNNWVGSIVFSP-DGTLLASGSDDQTVRLWNISSGEC-LYT 66845
Query: 311 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 350
H + + V +S + ILAS D + +WD+ K GE
Sbjct: 66846 LHGHINSVRSVAFS-SDGLILASGSDDETIKLWDV-KTGE 66959
>gb|BC006268.1|BC006268 Homo sapiens, peroxisomal biogenesis factor 7, clone MGC:10385
IMAGE:3948721, mRNA, complete cds
Length = 1113
Score = 88.6 bits (218), Expect = 1e-15
Identities = 65/231 (28%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Frame = +3
Query: 174 HQKEGYGLSWNSNLKGHLL-SASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVA 232
H +E Y + W+ L+ S S D TV LWD P GK + F GH +++
Sbjct: 372 HAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD----PTVGKSL---CTFRGHESIIYSTI 530
Query: 233 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 292
W F S + DQ L IWD ++ + + AH AE+ + Y+E +L TG+
Sbjct: 531 WSPHIPGCFASASGDQTLRIWDVKA---AGVRIVIPAHQAEILSCDWCKYNENLLVTGAV 701
Query: 293 DKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ 352
D ++ WDLRN++ + H I +V +SP + ++LAS D + W+ SK
Sbjct: 702 DCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK----- 866
Query: 353 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
P LL HT ++ P + S D ++I+ A
Sbjct: 867 --------PDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYDPA 995
Score = 75.5 bits (184), Expect = 9e-12
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 3/229 (1%)
Frame = +3
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDI--SAGPKEGKIVDAKAIFTGHSAVVEDVAWHLL 236
+ ++W+ N + L++ S D ++ LWD +AGP + ++ H+ V V W
Sbjct: 255 FDVTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQ--------VYKEHAQEVYSVDWSQT 410
Query: 237 H-ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 295
E L S + DQ + +WD T K + H + + ++P+ A+ S D+T
Sbjct: 411 RGEQLVVSGSWDQTVKLWDP---TVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQT 581
Query: 296 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 355
+ +WD++ +++ +H+ EI W +NE +L + D L WDL + +
Sbjct: 582 LRIWDVKAAGVRI-VIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVF-- 752
Query: 356 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 404
ELL GHT I ++P V+ S S D ++ W ++
Sbjct: 753 -------ELL----GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 866
Score = 72.4 bits (176), Expect = 7e-11
Identities = 45/173 (26%), Positives = 77/173 (44%)
Frame = +3
Query: 172 RGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDV 231
RGH+ Y W+ ++ G SAS D T+ +WD+ K + + H A +
Sbjct: 498 RGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV-------KAAGVRIVIPAHQAEILSC 656
Query: 232 AWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 291
W +E+L + A D L WD R+ +P + HT + + F+P+ +LA+ S
Sbjct: 657 DWCKYNENLLVTGAVDCSLRGWDLRN--VRQPVFELLGHTYAIRRVKFSPFHASVLASCS 830
Query: 292 ADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 344
D TV W+ L + E H + + +S + T +A D + ++D
Sbjct: 831 YDFTVRFWNFSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 989
Score = 43.1 bits (100), Expect = 0.048
Identities = 39/162 (24%), Positives = 59/162 (36%), Gaps = 38/162 (23%)
Frame = +3
Query: 279 FNPYSEFILATGSADK-------TVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETIL 331
F+PY LA +A T+ + D L+L D +F V WS +NE +L
Sbjct: 114 FSPYLPGRLACATAQHYGIAGCGTLLILDPDEAGLRLFRSFDWNDGLFDVTWSENNEHVL 293
Query: 332 ASSGTDRRLNVWDLSKI----------GEEQSAEDAEDGPPELLFIHG------------ 369
+ D L +WD +K +E + D E L + G
Sbjct: 294 ITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPT 473
Query: 370 ---------GHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
GH + I W+P+ P S S D ++IW +
Sbjct: 474 VGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV 599
>gb|U76560.1|HSU76560 Human peroxisome targeting signal 2 receptor (Pex7) mRNA, complete
cds
Length = 1434
Score = 88.6 bits (218), Expect = 1e-15
Identities = 65/231 (28%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Frame = +1
Query: 174 HQKEGYGLSWNSNLKGHLL-SASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVA 232
H +E Y + W+ L+ S S D TV LWD P GK + F GH +++
Sbjct: 376 HAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD----PTVGKSL---CTFRGHESIIYSTI 534
Query: 233 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 292
W F S + DQ L IWD ++ + + AH AE+ + Y+E +L TG+
Sbjct: 535 WSPHIPGCFASASGDQTLRIWDVKA---AGVRIVIPAHQAEILSCDWCKYNENLLVTGAV 705
Query: 293 DKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ 352
D ++ WDLRN++ + H I +V +SP + ++LAS D + W+ SK
Sbjct: 706 DCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK----- 870
Query: 353 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
P LL HT ++ P + S D ++I+ A
Sbjct: 871 --------PDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYDPA 999
Score = 75.5 bits (184), Expect = 9e-12
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 3/229 (1%)
Frame = +1
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDI--SAGPKEGKIVDAKAIFTGHSAVVEDVAWHLL 236
+ ++W+ N + L++ S D ++ LWD +AGP + ++ H+ V V W
Sbjct: 259 FDVTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQ--------VYKEHAQEVYSVDWSQT 414
Query: 237 H-ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 295
E L S + DQ + +WD T K + H + + ++P+ A+ S D+T
Sbjct: 415 RGEQLVVSGSWDQTVKLWDP---TVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQT 585
Query: 296 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 355
+ +WD++ +++ +H+ EI W +NE +L + D L WDL + +
Sbjct: 586 LRIWDVKAAGVRI-VIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVF-- 756
Query: 356 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 404
ELL GHT I ++P V+ S S D ++ W ++
Sbjct: 757 -------ELL----GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 870
Score = 72.4 bits (176), Expect = 7e-11
Identities = 45/173 (26%), Positives = 77/173 (44%)
Frame = +1
Query: 172 RGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDV 231
RGH+ Y W+ ++ G SAS D T+ +WD+ K + + H A +
Sbjct: 502 RGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV-------KAAGVRIVIPAHQAEILSC 660
Query: 232 AWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 291
W +E+L + A D L WD R+ +P + HT + + F+P+ +LA+ S
Sbjct: 661 DWCKYNENLLVTGAVDCSLRGWDLRN--VRQPVFELLGHTYAIRRVKFSPFHASVLASCS 834
Query: 292 ADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 344
D TV W+ L + E H + + +S + T +A D + ++D
Sbjct: 835 YDFTVRFWNFSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 993
Score = 43.1 bits (100), Expect = 0.048
Identities = 39/162 (24%), Positives = 59/162 (36%), Gaps = 38/162 (23%)
Frame = +1
Query: 279 FNPYSEFILATGSADK-------TVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETIL 331
F+PY LA +A T+ + D L+L D +F V WS +NE +L
Sbjct: 118 FSPYLPGRLACATAQHYGIAGCGTLLILDPDEAGLRLFRSFDWNDGLFDVTWSENNEHVL 297
Query: 332 ASSGTDRRLNVWDLSKI----------GEEQSAEDAEDGPPELLFIHG------------ 369
+ D L +WD +K +E + D E L + G
Sbjct: 298 ITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPT 477
Query: 370 ---------GHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
GH + I W+P+ P S S D ++IW +
Sbjct: 478 VGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV 603
>ref|NM_000288.1| Homo sapiens peroxisomal biogenesis factor 7 (PEX7), mRNA
Length = 1451
Score = 88.6 bits (218), Expect = 1e-15
Identities = 65/231 (28%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Frame = +1
Query: 174 HQKEGYGLSWNSNLKGHLL-SASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVA 232
H +E Y + W+ L+ S S D TV LWD P GK + F GH +++
Sbjct: 409 HAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD----PTVGKSL---CTFRGHESIIYSTI 567
Query: 233 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 292
W F S + DQ L IWD ++ + + AH AE+ + Y+E +L TG+
Sbjct: 568 WSPHIPGCFASASGDQTLRIWDVKA---AGVRIVIPAHQAEILSCDWCKYNENLLVTGAV 738
Query: 293 DKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ 352
D ++ WDLRN++ + H I +V +SP + ++LAS D + W+ SK
Sbjct: 739 DCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK----- 903
Query: 353 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
P LL HT ++ P + S D ++I+ A
Sbjct: 904 --------PDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYDPA 1032
Score = 75.5 bits (184), Expect = 9e-12
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 3/229 (1%)
Frame = +1
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDI--SAGPKEGKIVDAKAIFTGHSAVVEDVAWHLL 236
+ ++W+ N + L++ S D ++ LWD +AGP + ++ H+ V V W
Sbjct: 292 FDVTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQ--------VYKEHAQEVYSVDWSQT 447
Query: 237 H-ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 295
E L S + DQ + +WD T K + H + + ++P+ A+ S D+T
Sbjct: 448 RGEQLVVSGSWDQTVKLWDP---TVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQT 618
Query: 296 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 355
+ +WD++ +++ +H+ EI W +NE +L + D L WDL + +
Sbjct: 619 LRIWDVKAAGVRI-VIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVF-- 789
Query: 356 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 404
ELL GHT I ++P V+ S S D ++ W ++
Sbjct: 790 -------ELL----GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 903
Score = 72.4 bits (176), Expect = 7e-11
Identities = 45/173 (26%), Positives = 77/173 (44%)
Frame = +1
Query: 172 RGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDV 231
RGH+ Y W+ ++ G SAS D T+ +WD+ K + + H A +
Sbjct: 535 RGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV-------KAAGVRIVIPAHQAEILSC 693
Query: 232 AWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 291
W +E+L + A D L WD R+ +P + HT + + F+P+ +LA+ S
Sbjct: 694 DWCKYNENLLVTGAVDCSLRGWDLRN--VRQPVFELLGHTYAIRRVKFSPFHASVLASCS 867
Query: 292 ADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 344
D TV W+ L + E H + + +S + T +A D + ++D
Sbjct: 868 YDFTVRFWNFSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 1026
Score = 43.1 bits (100), Expect = 0.048
Identities = 39/162 (24%), Positives = 59/162 (36%), Gaps = 38/162 (23%)
Frame = +1
Query: 279 FNPYSEFILATGSADK-------TVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETIL 331
F+PY LA +A T+ + D L+L D +F V WS +NE +L
Sbjct: 151 FSPYLPGRLACATAQHYGIAGCGTLLILDPDEAGLRLFRSFDWNDGLFDVTWSENNEHVL 330
Query: 332 ASSGTDRRLNVWDLSKI----------GEEQSAEDAEDGPPELLFIHG------------ 369
+ D L +WD +K +E + D E L + G
Sbjct: 331 ITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPT 510
Query: 370 ---------GHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
GH + I W+P+ P S S D ++IW +
Sbjct: 511 VGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV 636
>gb|U88871.1|HSU88871 Human HsPex7p (HsPEX7) mRNA, complete cds
Length = 1451
Score = 88.6 bits (218), Expect = 1e-15
Identities = 65/231 (28%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Frame = +1
Query: 174 HQKEGYGLSWNSNLKGHLL-SASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVA 232
H +E Y + W+ L+ S S D TV LWD P GK + F GH +++
Sbjct: 409 HAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD----PTVGKSL---CTFRGHESIIYSTI 567
Query: 233 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 292
W F S + DQ L IWD ++ + + AH AE+ + Y+E +L TG+
Sbjct: 568 WSPHIPGCFASASGDQTLRIWDVKA---AGVRIVIPAHQAEILSCDWCKYNENLLVTGAV 738
Query: 293 DKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ 352
D ++ WDLRN++ + H I +V +SP + ++LAS D + W+ SK
Sbjct: 739 DCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK----- 903
Query: 353 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
P LL HT ++ P + S D ++I+ A
Sbjct: 904 --------PDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYDPA 1032
Score = 75.5 bits (184), Expect = 9e-12
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 3/229 (1%)
Frame = +1
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDI--SAGPKEGKIVDAKAIFTGHSAVVEDVAWHLL 236
+ ++W+ N + L++ S D ++ LWD +AGP + ++ H+ V V W
Sbjct: 292 FDVTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQ--------VYKEHAQEVYSVDWSQT 447
Query: 237 H-ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 295
E L S + DQ + +WD T K + H + + ++P+ A+ S D+T
Sbjct: 448 RGEQLVVSGSWDQTVKLWDP---TVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQT 618
Query: 296 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 355
+ +WD++ +++ +H+ EI W +NE +L + D L WDL + +
Sbjct: 619 LRIWDVKAAGVRI-VIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVF-- 789
Query: 356 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 404
ELL GHT I ++P V+ S S D ++ W ++
Sbjct: 790 -------ELL----GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 903
Score = 72.4 bits (176), Expect = 7e-11
Identities = 45/173 (26%), Positives = 77/173 (44%)
Frame = +1
Query: 172 RGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDV 231
RGH+ Y W+ ++ G SAS D T+ +WD+ K + + H A +
Sbjct: 535 RGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV-------KAAGVRIVIPAHQAEILSC 693
Query: 232 AWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 291
W +E+L + A D L WD R+ +P + HT + + F+P+ +LA+ S
Sbjct: 694 DWCKYNENLLVTGAVDCSLRGWDLRN--VRQPVFELLGHTYAIRRVKFSPFHASVLASCS 867
Query: 292 ADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 344
D TV W+ L + E H + + +S + T +A D + ++D
Sbjct: 868 YDFTVRFWNFSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 1026
Score = 43.1 bits (100), Expect = 0.048
Identities = 39/162 (24%), Positives = 59/162 (36%), Gaps = 38/162 (23%)
Frame = +1
Query: 279 FNPYSEFILATGSADK-------TVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETIL 331
F+PY LA +A T+ + D L+L D +F V WS +NE +L
Sbjct: 151 FSPYLPGRLACATAQHYGIAGCGTLLILDPDEAGLRLFRSFDWNDGLFDVTWSENNEHVL 330
Query: 332 ASSGTDRRLNVWDLSKI----------GEEQSAEDAEDGPPELLFIHG------------ 369
+ D L +WD +K +E + D E L + G
Sbjct: 331 ITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPT 510
Query: 370 ---------GHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
GH + I W+P+ P S S D ++IW +
Sbjct: 511 VGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV 636
>gb|BC013550.1|BC013550 Mus musculus, Similar to PCAF associated factor 65 beta, clone
MGC:19341 IMAGE:4222283, mRNA, complete cds
Length = 2900
Score = 88.2 bits (217), Expect = 1e-15
Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 1/252 (0%)
Frame = +2
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
LRGH Y + ++ G LLS S+D ++ WD+ + ++ GH+ V D
Sbjct: 1136 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNT-------VLYQGHAYPVWD 1291
Query: 231 VAWHLLHESL-FGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 289
V + SL F S + D+ +W S + P H A+V+C+ F+P S + LAT
Sbjct: 1292 V--DISPFSLYFASGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LAT 1453
Query: 290 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 349
GS DKTV LW + + F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 1454 GSTDKTVRLWSAQQGN-SVRLFTGHRGPVLSLSFSP-NGKYLASAGEDQRLKLWDLAS-- 1621
Query: 350 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYND 409
L GHT I+ +++P + +I S S DN +++W + N
Sbjct: 1622 ------------GTLFKELRGHTDSITSLAFSP-DSGLIASASMDNSVRVWDIRSTCCN- 1759
Query: 410 EEPDIAAAELEG 421
D ++ EL G
Sbjct: 1760 TPADGSSGELVG 1795
>emb|AL023833.1|CEY21F11A Caenorhabditis elegans cosmid Y21F11A, complete sequence
Length = 699
Score = 88.2 bits (217), Expect = 1e-15
Identities = 40/49 (81%), Positives = 46/49 (93%), Gaps = 1/49 (2%)
Frame = -3
Query: 7 LED-TVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSR 54
LED T E+RV ++EYKIWKKNTPFLYDLVMTHALEWPSL+VQWLPDV++
Sbjct: 178 LEDGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAK 32
>gb|L24437.1|ATHCOP1A Arabidopsis thaliana (COP1) regulatory protein, complete cds
Length = 2331
Score = 87.4 bits (215), Expect = 2e-15
Identities = 74/282 (26%), Positives = 126/282 (44%)
Frame = +1
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
I H + + ++ + AT S + VFD++ ++P +C P + + K
Sbjct: 1141 IFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSFVNEPADM-QC-PIVEMSTRSKLS 1314
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
LSWN + K H+ S+ + V +WD++ ++ + H V +
Sbjct: 1315 C-LSWNKHEKNHIASSDYEGIVTVWDVTTR-------QSRMEYEEHEKRAWSVDFSRTEP 1470
Query: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 298
S+ S +DD K+ +W TR + ++D A + C+ +NP S +A GSAD +
Sbjct: 1471 SMLVSGSDDCKVKVWCTRQEASVI---NIDMK-ANICCVKYNPGSSNYIAVGSADHHIHY 1638
Query: 299 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 358
+DLRN+ LH F HK + V + +NE LAS+ TD L +WD+ +
Sbjct: 1639 YDLRNISQPLHVFSGHKKAVSYVKFLSNNE--LASASTDSTLRLWDV------------K 1776
Query: 359 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 400
D P F GHT + + N ++ C SE N + ++
Sbjct: 1777 DNLPVRTF--RGHTNEKNFVGLTVNSEYLACG-SETNEVYVY 1893
>ref|NM_120923.1| katanin p80 subunit - like protein
Length = 2616
Score = 87.4 bits (215), Expect = 2e-15
Identities = 75/258 (29%), Positives = 117/258 (45%)
Frame = +1
Query: 144 SADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLW 203
S+ VLV H G+ N L L GH ++++++ +G + + + T+ LW
Sbjct: 361 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDAS-EGLVAAGAASGTIKLW 537
Query: 204 DISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 263
D+ +E K+V TGH + V +H E F S + D L IWD R
Sbjct: 538 DL----EEAKVVRT---LTGHRSNCVSVNFHPFGE-FFASGSLDTNLKIWDIRKKGCI-- 687
Query: 264 SHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHW 323
H+ HT VN L F P +I++ G D V +WDL KL LH F+SH+ +I + +
Sbjct: 688 -HTYKGHTRGVNVLRFTPDGRWIVS-GGEDNVVKVWDLTAGKL-LHEFKSHEGKIQSLDF 858
Query: 324 SPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPN 383
PH E +LA+ D+ + WDL EL+ G T + ++NP+
Sbjct: 859 HPH-EFLLATGSADKTVKFWDLETF--------------ELIGSGGTETTGVRCLTFNPD 993
Query: 384 EPWVICSVSEDNIMQIWQ 401
V+C + E + W+
Sbjct: 994 GKSVLCGLQESLKIFSWE 1047
Score = 53.5 bits (127), Expect = 4e-05
Identities = 40/176 (22%), Positives = 66/176 (36%), Gaps = 42/176 (23%)
Frame = +1
Query: 269 AHTAEVNCLSFN------------------------------------------PYSEFI 286
AH+A VNCL SE +
Sbjct: 319 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGL 498
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 346
+A G+A T+ LWDL K+ + + H+ V++ P E AS D L +WD+
Sbjct: 499 VAAGAASGTIKLWDLEEAKV-VRTLTGHRSNCVSVNFHPFGE-FFASGSLDTNLKIWDIR 672
Query: 347 KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
K G + + GHT ++ + P+ W++ S EDN++++W +
Sbjct: 673 KKG--------------CIHTYKGHTRGVNVLRFTPDGRWIV-SGGEDNVVKVWDL 795
>gb|AF443204.1|AF443204 Chlamydomonas reinhardtii WD40-repeat-containing protein (Mut11)
mRNA, complete cds
Length = 1113
Score = 86.3 bits (212), Expect = 5e-15
Identities = 69/248 (27%), Positives = 117/248 (46%), Gaps = 1/248 (0%)
Frame = +1
Query: 157 SKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLL-SASDDHTVCLWDISAGPKEGKIV 215
S P+P+ L GH K + ++ + G LL S S D TV LWD + G + +
Sbjct: 64 STPNPTVAFRCTHALSGHTKAVAAVKFSPD--GSLLASGSADRTVALWDAATGARVNTLA 237
Query: 216 DAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVN 275
GHS V DVAW+ L + ADD L +WD + + ++ HT V
Sbjct: 238 -------GHSCGVSDVAWNPNGRYL-ATAADDHSLKLWDAETGACLR---TLTGHTNYVF 384
Query: 276 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSG 335
C +F+ + +LA+GS D+T+ LWD+R+ + L +H D + +S ++ +++ +S
Sbjct: 385 CCNFDGAAGHLLASGSFDETLRLWDVRSGRC-LREVPAHSDPVTSAAFS-YDGSMVVTSS 558
Query: 336 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 395
D + +WD ++ G D PP +S ++ PN +V+C+ + D
Sbjct: 559 LDGLIRLWD-TQTGHCLKTLFDRDSPP------------VSFAAFTPNAKYVLCN-TLDG 696
Query: 396 IMQIWQMA 403
++W A
Sbjct: 697 RAKLWDYA 720
>gb|AF315714.1|AF315714 Ipomoea nil COP1 mRNA, complete cds
Length = 2312
Score = 86.3 bits (212), Expect = 5e-15
Identities = 74/285 (25%), Positives = 126/285 (43%)
Frame = +3
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
I H + + ++ + AT S + VFD++ ++P C P + + K
Sbjct: 1152 IFHSANIVSSIEFDRDDELFATAGVSRRIKVFDFSSVVNEP-ADAHC-PVVEMSTRSKLS 1325
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
LSWN K H+ S+ D V +WD++ + + H V +
Sbjct: 1326 C-LSWNKYTKNHIASSDYDGIVTVWDVTTRQSVME-------YEEHEKRAWSVDFSRTDP 1481
Query: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 298
S+ S +DD K+ +W T+ ++ ++D A + C+ +NP S F +A GSAD +
Sbjct: 1482 SMLVSGSDDCKVKVWCTKQEASAL---NIDMK-ANICCVKYNPGSSFHVAVGSADHHIHY 1649
Query: 299 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 358
+DLRN LH F HK + V + +E LAS+ TD L +WD+ +
Sbjct: 1650 YDLRNTSAPLHIFSGHKKAVSYVKFLSSHE--LASASTDSTLRLWDV------------K 1787
Query: 359 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
D P +F GHT + + + + ++ C SE N + ++ A
Sbjct: 1788 DNSPVRVF--RGHTNEKNFVGLSVSNEFISCG-SETNEVFVYHKA 1913
>gb|AE003554.2|AE003554 Drosophila melanogaster genomic scaffold 142000013386050 section 14 of
54, complete sequence
Length = 285752
Score = 86.3 bits (212), Expect = 5e-15
Identities = 56/174 (32%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
Frame = +3
Query: 167 PDLRLRGHQKEGYGLSWNSNLKGH-LLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHS 225
P + L+ H+ E Y L W H LLS S D T+ LWD + ++ I F GH+
Sbjct: 33420 PLICLQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKLWDCN---RQNSITT----FVGHN 33578
Query: 226 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEF 285
++ + L +LF SV+ D L +W++ + KP S++AH +E C ++ +
Sbjct: 33579 DLIYGAKFSPLIANLFASVSTDGHLNLWNSL-DFAGKPLMSIEAHASEALCCDWSHFDRN 33755
Query: 286 ILATGSADKTVALWDLRNLKLKLHSFESHKDE--IFQVHWSPHNETILASSGTD 337
+L TG +D + WDLR K++ H FE + E + ++ SPH+ +LAS+ D
Sbjct: 33756 VLVTGGSDGLIRGWDLR--KMRTHVFELYSGEFAVRRLACSPHSAAVLASANYD 33911
>gb|AC010019.4| Drosophila melanogaster 3L BAC RP98-6F6 (Roswell Park Cancer Institute
Drosophila BAC Library) complete sequence
Length = 195136
Score = 86.3 bits (212), Expect = 5e-15
Identities = 56/174 (32%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
Frame = -3
Query: 167 PDLRLRGHQKEGYGLSWNSNLKGH-LLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHS 225
P + L+ H+ E Y L W H LLS S D T+ LWD + ++ I F GH+
Sbjct: 37523 PLICLQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKLWDCN---RQNSITT----FVGHN 37365
Query: 226 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEF 285
++ + L +LF SV+ D L +W++ + KP S++AH +E C ++ +
Sbjct: 37364 DLIYGAKFSPLIANLFASVSTDGHLNLWNSL-DFAGKPLMSIEAHASEALCCDWSHFDRN 37188
Query: 286 ILATGSADKTVALWDLRNLKLKLHSFESHKDE--IFQVHWSPHNETILASSGTD 337
+L TG +D + WDLR K++ H FE + E + ++ SPH+ +LAS+ D
Sbjct: 37187 VLVTGGSDGLIRGWDLR--KMRTHVFELYSGEFAVRRLACSPHSAAVLASANYD 37032
>dbj|AP003581.1|AP003581 Nostoc sp. PCC 7120 DNA, complete genome, section 1/19
Length = 348050
Score = 85.9 bits (211), Expect = 6e-15
Identities = 67/244 (27%), Positives = 115/244 (46%), Gaps = 3/244 (1%)
Frame = +2
Query: 162 SGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIF 221
+GEC L ++ S + + L SAS D T+ LWDI+ G + +
Sbjct: 26372 TGECLKTLSKNTNKVYSVAFSPDGRI---LASASQDQTIKLWDIATG-------NCQQTL 26521
Query: 222 TGHSAVVEDVAWHLLHES---LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLS 278
GH V V + + + L S + DQ + +WD T K ++ HT EV+ +S
Sbjct: 26522 IGHDDWVWSVTFSPVTDDRPLLLASSSADQHIKLWDV---ATGKCLKTLKGHTREVHSVS 26692
Query: 279 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDR 338
F+P + LA+ D TV LWD++ + FE H +++ V +SP +T LAS G DR
Sbjct: 26693 FSPDGQ-TLASSGEDSTVRLWDVKTGQC-WQIFEGHSKKVYSVRFSPDGQT-LASCGEDR 26863
Query: 339 RLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 398
+ +WD+ + E + GH++++ +++P+ +I S S+D +
Sbjct: 26864 SIKLWDIQR--------------GECVNTLWGHSSQVWAIAFSPDGRTLI-SCSDDQTAR 26998
Query: 399 IWQM 402
+W +
Sbjct: 26999 LWDV 27010
Score = 79.3 bits (194), Expect = 6e-13
Identities = 62/231 (26%), Positives = 119/231 (50%), Gaps = 1/231 (0%)
Frame = -3
Query: 171 LRGHQKEGYGLSWNSNLKGHLL-SASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVE 229
L+GH + +S++ N G ++ S S DHT+ LW + GK++ GHS V
Sbjct: 318069 LKGHDQGVKSVSFSPN--GEIIASGSSDHTINLWS-----RAGKLL---LSLNGHSQGVN 317920
Query: 230 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 289
+ + +++ S +DD + +W + +P ++ +HT +V ++F+P + I++
Sbjct: 317919 SIKFSPEGDTI-ASASDDGTIRLW----SLDGRPLITIPSHTKQVLAVTFSPDGQTIVSA 317755
Query: 290 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 349
G AD TV LW RN L L + E H + ++QV +SP ++A++ D+ + +W
Sbjct: 317754 G-ADNTVKLWS-RNGTL-LTTLEGHNEAVWQVIFSPDGR-LIATASADKTITLW------ 317605
Query: 350 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 400
+ DG +L GH +++ S++P+ ++ S S+DN +++W
Sbjct: 317604 -------SRDG--NILGTFAGHNHEVNSLSFSPDGN-ILASGSDDNTVRLW 317482
Score = 77.0 bits (188), Expect = 3e-12
Identities = 66/243 (27%), Positives = 118/243 (48%), Gaps = 2/243 (0%)
Frame = +2
Query: 163 GECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFT 222
GEC L GH + + ++++ + + L+S SDD T LWD+ G ++ I
Sbjct: 26891 GECVNTLW--GHSSQVWAIAFSPDGRT-LISCSDDQTARLWDVITG-------NSLNILR 27040
Query: 223 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPY 282
G++ V VA+ + S DD + +W+ ++ H + H + ++F+P
Sbjct: 27041 GYTRDVYSVAFSP-DSQILASGRDDYTIGLWNLKTGEC----HPLRGHQGRIRSVAFHPD 27205
Query: 283 SEFILATGSADKTVALWDL--RNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRL 340
+ ILA+GSAD T+ LWD+ N + + H + ++ V +SP T LASS DR +
Sbjct: 27206 GK-ILASGSADNTIKLWDISDTNHSKYIRTLTGHTNWVWTVVFSPDKHT-LASSSEDRTI 27379
Query: 341 NVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 400
+WD +D D +L GH+ + +++P + ++ S S D+ ++IW
Sbjct: 27380 RLWD----------KDTGDCLQKL----KGHSHWVWTVAFSP-DGRILASGSADSEIKIW 27514
Query: 401 QMA 403
+A
Sbjct: 27515 DVA 27523
Score = 73.2 bits (178), Expect = 4e-11
Identities = 66/243 (27%), Positives = 123/243 (50%), Gaps = 9/243 (3%)
Frame = +1
Query: 169 LRLRGHQKEGYG-----LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTG 223
L L+GH K + ++++ N K L SASDD T+ LWD++ G +I+ FTG
Sbjct: 264559 LILKGHGKSSWSGGVNSIAFSPNGKT-LASASDDKTIKLWDVNTG---AEII----AFTG 264714
Query: 224 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYS 283
H V V++ ++L S + D+ + +W S T + +S+ H +V ++F+P
Sbjct: 264715 HEEAVYSVSFSPDGKTLV-SGSKDKSVKLW---SLATGRELYSLKGHLDDVLSVAFSPDG 264882
Query: 284 EFILATGSA-DKTVALWDLRNLKLKLHSFESHKD---EIFQVHWSPHNETILASSGTDRR 339
+ + + G+ DKT+ +W L K K+ + H + I + +SP + ILAS D+
Sbjct: 264883 QVVASGGAGNDKTIKIWHL--AKQKVQTITGHSEWFGGINSLAFSP-DGNILASGSWDKN 265053
Query: 340 LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQI 399
+ +W + Q++E+ + GH+ + S++PN ++ S S+D +++
Sbjct: 265054 IKLW------QWQNSEE--------ICTLTGHSDHVCCVSFSPNGN-ILASASKDKSIKL 265188
Query: 400 WQM 402
WQ+
Sbjct: 265189 WQV 265197
Score = 72.8 bits (177), Expect = 6e-11
Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 41/282 (14%)
Frame = +2
Query: 162 SGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIF 221
+GEC+P LRGHQ ++++ + K L S S D+T+ LWDIS K +
Sbjct: 27140 TGECHP---LRGHQGRIRSVAFHPDGK-ILASGSADNTIKLWDIS-DTNHSKYIRT---L 27295
Query: 222 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNP 281
TGH+ V V + +L S ++D+ + +WD T + H+ V ++F+P
Sbjct: 27296 TGHTNWVWTVVFSPDKHTLASS-SEDRTIRLWD---KDTGDCLQKLKGHSHWVWTVAFSP 27463
Query: 282 YSEFILATGSADKTVALWD---------------------------------------LR 302
ILA+GSAD + +WD L
Sbjct: 27464 DGR-ILASGSADSEIKIWDVASGKCLQTLTDPQGMIWSVAFSLDGTLLASASEDQTVKLW 27640
Query: 303 NLKLK--LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG 360
NLK +H+ + H+ +++ V +SP N I AS D + +WD+S S D
Sbjct: 27641 NLKTGECVHTLKGHEKQVYSVAFSP-NGQIAASGSEDTTVKLWDIS----TGSCVDT--- 27796
Query: 361 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
+ GHTA I +++P + ++ S SED +Q+W M
Sbjct: 27797 ------LKHGHTAAIRSVAFSP-DGRLLASGSEDEKIQLWDM 27901
Score = 67.8 bits (164), Expect = 2e-09
Identities = 55/175 (31%), Positives = 89/175 (50%)
Frame = -1
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
L GH E ++++ + + L S S D+TV +W +G+++ TGH +
Sbjct: 311735 LTGHNDEVTSVNFSPDGQ-FLASGSTDNTVKIWQT-----DGRLIKN---ITGHGLAIAS 311583
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
V + +L S + D + +W T K ++++ H V LSF+P E ILA+G
Sbjct: 311582 VKFSPDSHTL-ASASWDNTIKLWQV---TDGKLINNLNGHIDGVTSLSFSPDGE-ILASG 311418
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 345
SAD T+ LW+L N L L + H +I + +SP +T+L S G D + VW+L
Sbjct: 311417 SADNTIKLWNLPNATL-LKTLLGHPGKINTLAFSPDGKTLL-SGGEDAGVMVWNL 311259
Score = 62.8 bits (151), Expect = 6e-08
Identities = 46/161 (28%), Positives = 81/161 (49%)
Frame = -1
Query: 241 FGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 300
F S D + IW + S S ++ + + +S++P + I AT SAD T+ LWD
Sbjct: 312062 FASAGWDGNITIWQRETLAHSSLS-TIQKNQNIITTVSYSPDGKTI-ATASADNTIKLWD 311889
Query: 301 LRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG 360
+ +L + + HKD I + + P N+TI AS D+ + +W ++ DG
Sbjct: 311888 SQTQQL-IKTLTGHKDRITTLSFHPDNQTI-ASGSADKTIKIWRVN------------DG 311751
Query: 361 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 401
+LL GH +++ +++P+ + + S S DN ++IWQ
Sbjct: 311750 --QLLRTLTGHNDEVTSVNFSPDGQF-LASGSTDNTVKIWQ 311637
Score = 62.4 bits (150), Expect = 8e-08
Identities = 49/159 (30%), Positives = 84/159 (52%)
Frame = -3
Query: 190 HLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQK 249
+++SAS D T+ +W + +G+++ GHSA V V ++L S + D+
Sbjct: 317031 NIVSASADKTIKIWSL-----DGRLIRT---LQGHSASVWSVNLSPDGQTL-ASTSQDET 316879
Query: 250 LMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH 309
+ +W N + +++ H+ V LSF+P + I A+ S D T+ LW++ N L L
Sbjct: 316878 IKLW----NLNGELIYTLRGHSDVVYNLSFSPDGKTI-ASASDDGTIKLWNVPNGTL-LK 316717
Query: 310 SFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 348
+F+ H+ + V +SP + ILAS G D + VW+L I
Sbjct: 316716 TFQGHRGGVRSVSFSPDGK-ILASGGHDTTVKVWNLEGI 316603
Score = 60.5 bits (145), Expect = 3e-07
Identities = 66/278 (23%), Positives = 117/278 (41%), Gaps = 45/278 (16%)
Frame = -1
Query: 170 RLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWD--------ISAGPKE---------- 211
RL+GH ++ +S++ + K L SASDD TV LWD I+A K
Sbjct: 313007 RLQGHAQQVNAVSFSPDGKV-LASASDDRTVKLWDIHGQLITTITASQKRVTAIAFSHNG 312831
Query: 212 ---------------------------GKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSV 244
K + F GH+ +V DV + +++ S
Sbjct: 312830 KYLATANADYTIKLYALDTSCLIVNNLQKCIQLIKTFPGHTDIVTDVVFSPDSKTIVSS- 312654
Query: 245 ADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 304
+ D+ + +W + ++ +AH VN +SF+P + I A+G D V LW N
Sbjct: 312653 SLDKTIKLWRIDGSII----NTWNAHNGWVNSISFSPDGKMI-ASGGEDNLVKLWQATNG 312489
Query: 305 KLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 364
L + + HK+ I V +SP + ILAS+ D+ + W+ DG +
Sbjct: 312488 HL-IKTLTGHKERITSVKFSPDGK-ILASASGDKTIKFWN-------------TDG--KF 312360
Query: 365 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
L H +++ +++ + ++ S D+ M++W++
Sbjct: 312359 LKTIAAHNQQVNSINFSSDSKTLV-SAGADSTMKVWKI 312249
Score = 60.1 bits (144), Expect = 4e-07
Identities = 52/179 (29%), Positives = 88/179 (49%)
Frame = -3
Query: 224 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYS 283
H+A V V++ E + S + D + +W K ++ H VN +SF+P
Sbjct: 318306 HNAWVTSVSYSPDGE-VIASGSVDNTIHLW----RRDGKLLTTLTGHNDGVNSVSFSPDG 318142
Query: 284 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 343
E ILA+ SAD T+ LW RN +L + + + H + V +SP+ E I+AS +D +N+W
Sbjct: 318141 E-ILASASADSTIKLWQ-RNGQL-ITTLKGHDQGVKSVSFSPNGE-IIASGSSDHTINLW 317974
Query: 344 DLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
S+ G +LL GH+ ++ ++P E I S S+D +++W +
Sbjct: 317973 --SRAG-------------KLLLSLNGHSQGVNSIKFSP-EGDTIASASDDGTIRLWSL 317845
Score = 58.5 bits (140), Expect = 1e-06
Identities = 42/155 (27%), Positives = 79/155 (50%)
Frame = +2
Query: 249 KLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL 308
++ +W T N K HTA V +F+P S +LA+GSAD T+ LWD+ + L
Sbjct: 26222 EIRLWQTSDN---KQLRIYKGHTAWVWAFAFSPDSR-MLASGSADSTIKLWDVHTGEC-L 26386
Query: 309 HSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIH 368
+ + ++++ V +SP ILAS+ D+ + +WD++ +Q+ +D + F
Sbjct: 26387 KTLSKNTNKVYSVAFSPDGR-ILASASQDQTIKLWDIATGNCQQTLIGHDDWVWSVTF-- 26557
Query: 369 GGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
+ ++D + P ++ S S D +++W +A
Sbjct: 26558 ----SPVTD-----DRPLLLASSSADQHIKLWDVA 26635
Score = 57.8 bits (138), Expect = 2e-06
Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 31/266 (11%)
Frame = -3
Query: 173 GHQKEGYGLSWNSNLKGHLL-SASDDHTVCLWDISAG-PK-----EGKIV------DAKA 219
GH E LS++ + G++L S SDD+TV LW ++ PK +G + D K
Sbjct: 317571 GHNHEVNSLSFSPD--GNILASGSDDNTVRLWTVNRTLPKTFYGHKGSVSYVRFSNDGKK 317398
Query: 220 IFTGHSAVVEDVAWHL---LHESLFGSVADDQKLMIW-DTRSNTTSKPSH---------- 265
I T S W L L ++L + D + D + + P H
Sbjct: 317397 I-TSLSTDSTMKTWSLDGKLLQTLSSPLPDVTSISFTPDNKIVALASPDHTIHLYNRQGG 317221
Query: 266 ---SVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVH 322
S+ H + LSF+P + ILA+GSADKT+ LW + LK + H + +
Sbjct: 317220 LLRSLPGHNHWITSLSFSPNKQ-ILASGSADKTIKLWSVNGRLLK--TLLGHNGWVTDIK 317050
Query: 323 WSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 382
+S + I+++S D+ + +W L DG L+ GH+A + + +P
Sbjct: 317049 FSADGKNIVSAS-ADKTIKIWSL-------------DG--RLIRTLQGHSASVWSVNLSP 316918
Query: 383 NEPWVICSVSEDNIMQIWQM-AENIY 407
+ + S S+D +++W + E IY
Sbjct: 316917 -DGQTLASTSQDETIKLWNLNGELIY 316843
Score = 56.6 bits (135), Expect = 4e-06
Identities = 51/212 (24%), Positives = 98/212 (46%)
Frame = -1
Query: 191 LLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 250
++S+S D T+ LW I +G I++ + H+ V +++ + S +D +
Sbjct: 312665 IVSSSLDKTIKLWRI-----DGSIINT---WNAHNGWVNSISFSP-DGKMIASGGEDNLV 312513
Query: 251 MIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 310
+W + K ++ H + + F+P + ILA+ S DKT+ W+ LK +
Sbjct: 312512 KLWQATNGHLIK---TLTGHKERITSVKFSPDGK-ILASASGDKTIKFWNTDGKFLK--T 312351
Query: 311 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGG 370
+H ++ +++S ++T L S+G D + VW + DG L+ G
Sbjct: 312350 IAAHNQQVNSINFSSDSKT-LVSAGADSTMKVWKI-------------DG--TLIKTISG 312219
Query: 371 HTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
+I D +++P+ VI S S D ++I Q+
Sbjct: 312218 RGEQIRDVTFSPDNK-VIASASSDKTVRIRQL 312126
Score = 55.8 bits (133), Expect = 7e-06
Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Frame = +1
Query: 266 SVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN---LKLKLHSFESHKDEIFQVH 322
++ H+ +V + F+P + LA+GSADKTV +W+L N L LK H S + +
Sbjct: 264439 TLKGHSDKVMSVMFSPDGQR-LASGSADKTVRVWNLANEETLILKGHGKSSWSGGVNSIA 264615
Query: 323 WSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 382
+SP+ +T LAS+ D+ + +WD++ E + GH + S++P
Sbjct: 264616 FSPNGKT-LASASDDKTIKLWDVNTGAE--------------IIAFTGHEEAVYSVSFSP 264750
Query: 383 NEPWVICSVSEDNIMQIWQMA 403
+ ++ S S+D +++W +A
Sbjct: 264751 DGKTLV-SGSKDKSVKLWSLA 264810
Score = 50.8 bits (120), Expect = 2e-04
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 6/137 (4%)
Frame = -3
Query: 177 EGYGLS-WNSNLKGH---LLSASDDHTVCLWDISAGPKEGKIVDAKAIFT--GHSAVVED 230
+G+ S W+ NL L S S D T+ LW+++ + I+T GHS VV +
Sbjct: 316959 QGHSASVWSVNLSPDGQTLASTSQDETIKLWNLNG----------ELIYTLRGHSDVVYN 316810
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
+++ +++ S +DD + +W+ + T K + H V +SF+P + ILA+G
Sbjct: 316809 LSFSPDGKTI-ASASDDGTIKLWNVPNGTLLK---TFQGHRGGVRSVSFSPDGK-ILASG 316645
Query: 291 SADKTVALWDLRNLKLK 307
D TV +W+L ++L+
Sbjct: 316644 GHDTTVKVWNLEGIELQ 316594
Score = 48.1 bits (113), Expect = 0.001
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +2
Query: 162 SGECNPDLRLRGHQKEGYGLSWNSNLKGHLL-SASDDHTVCLWDISAGPKEGKIVDAKAI 220
+GEC L+ GH+K+ Y ++++ N G + S S+D TV LWDIS G VD +
Sbjct: 27650 TGECVHTLK--GHEKQVYSVAFSPN--GQIAASGSEDTTVKLWDISTG----SCVDT--L 27799
Query: 221 FTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS 257
GH+A + VA+ L S ++D+K+ +WD ++
Sbjct: 27800 KHGHTAAIRSVAFSP-DGRLLASGSEDEKIQLWDMQN 27907
>ref|XM_081279.1| similar to LD24014p (D. melanogaster), mRNA
Length = 2783
Score = 85.1 bits (209), Expect = 1e-14
Identities = 63/230 (27%), Positives = 106/230 (45%), Gaps = 1/230 (0%)
Frame = +1
Query: 172 RGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDV 231
+ H++ G+S+ S +S SDD T+ +WD +E + GH A V+ V
Sbjct: 904 QAHKEAIRGISF-SPTDSKFVSGSDDGTLRIWDFMRCQEE-------RVLRGHGADVKCV 1059
Query: 232 AWHLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
WH + GS + Q + IWD +S H AH + V L +N + L T
Sbjct: 1060 HWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLH---AHKSTVMDLKWNDNGNW-LVTA 1227
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 350
S D + L+D+RNL+ ++ F HK E V W P +E + S G+D + W+ +G
Sbjct: 1228 SRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWN---VGT 1398
Query: 351 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 400
++ E+ + H + + +W+P ++CS S D+ ++ W
Sbjct: 1399 DK----------EIGCVETAHDSIVWTLAWHP-LGHILCSGSNDHTIKFW 1515
Score = 58.5 bits (140), Expect = 1e-06
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 2/176 (1%)
Frame = +1
Query: 238 ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD--KT 295
+S F S +DD L IWD + + H A+V C+ ++P I++ GS D +
Sbjct: 949 DSKFVSGSDDGTLRIWDFMR---CQEERVLRGHGADVKCVHWHPQKGMIVS-GSKDNQQP 1116
Query: 296 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 355
+ +WD ++ + L + +HK + + W+ + ++ +S D L ++D+ + EE
Sbjct: 1117 IKIWDPKS-GIALATLHAHKSTVMDLKWNDNGNWLVTAS-RDHLLKLFDIRNLREEVQ-- 1284
Query: 356 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 411
+ GH + S SW+P + CS D + W N+ D+E
Sbjct: 1285 -----------VFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFW----NVGTDKE 1407
Score = 44.3 bits (103), Expect = 0.022
Identities = 28/117 (23%), Positives = 52/117 (43%), Gaps = 1/117 (0%)
Frame = +1
Query: 172 RGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDV 231
RGH+KE +SW+ +G S D ++ W++ + G + T H ++V +
Sbjct: 1291 RGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIG------CVETAHDSIVWTL 1452
Query: 232 AWHLLHESLFGSVADDQKLMIWD-TRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFIL 287
AWH L L S ++D + W R + ++++ A + L Y + I+
Sbjct: 1453 AWHPLGHILC-SGSNDHTIKFWTRNRPGDLMRDKYNLNTLPASLAALDECEYDDAII 1620
>dbj|AK004687.1|AK004687 Mus musculus adult male lung cDNA, RIKEN full-length enriched
library, clone:1200010C05:peroxisome biogenesis factor
7, full insert sequence
Length = 1441
Score = 85.1 bits (209), Expect = 1e-14
Identities = 52/175 (29%), Positives = 84/175 (47%), Gaps = 1/175 (0%)
Frame = +3
Query: 174 HQKEGYGLSWNSNLKGHLL-SASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVA 232
H +E Y + W+ L+ S S D TV +WD + G ++ F GH +V+
Sbjct: 399 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVG-------NSLCTFRGHESVIYSTI 557
Query: 233 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 292
W F S + DQ L IWD + T+ + AH E+ + Y+E ++ TG+
Sbjct: 558 WSPHIPGCFASASGDQTLRIWDVK---TTGVRIVIPAHQTEILSCDWCKYNENLVVTGAV 728
Query: 293 DKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
D ++ WDLRN++ + H I +V +SP + ++LAS D + W+ SK
Sbjct: 729 DCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 893
Score = 72.8 bits (177), Expect = 6e-11
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 1/227 (0%)
Frame = +3
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLH- 237
+ ++W+ N + L++ S D ++ LWD + K ++ H+ V V W
Sbjct: 282 FDVTWSENNEHVLVTCSGDGSLQLWDTA------KATGPLQVYKEHTQEVYSVDWSQTRG 443
Query: 238 ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 297
E L S + DQ + +WD T + H + + ++P+ A+ S D+T+
Sbjct: 444 EQLVVSGSWDQTVKVWDP---TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLR 614
Query: 298 LWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 357
+WD++ +++ +H+ EI W +NE ++ + D L WDL + +
Sbjct: 615 IWDVKTTGVRI-VIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVF---- 779
Query: 358 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 404
ELL GHT I ++P V+ S S D ++ W ++
Sbjct: 780 -----ELL----GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 893
Score = 69.3 bits (168), Expect = 6e-10
Identities = 44/173 (25%), Positives = 75/173 (42%)
Frame = +3
Query: 172 RGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDV 231
RGH+ Y W+ ++ G SAS D T+ +WD+ K + + H +
Sbjct: 525 RGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV-------KTTGVRIVIPAHQTEILSC 683
Query: 232 AWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 291
W +E+L + A D L WD R+ +P + HT + + F+P+ +LA+ S
Sbjct: 684 DWCKYNENLVVTGAVDCSLRGWDLRN--VRQPVFELLGHTYAIRRVKFSPFHASVLASCS 857
Query: 292 ADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 344
D TV W+ L + E H + + S + T +A D + ++D
Sbjct: 858 YDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCSWDETIKIYD 1016
Score = 42.4 bits (98), Expect = 0.082
Identities = 39/162 (24%), Positives = 61/162 (37%), Gaps = 38/162 (23%)
Frame = +3
Query: 279 FNPYSEFILATGSADK-------TVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETIL 331
F+PY LA +A T+ + D L++ D +F V WS +NE +L
Sbjct: 141 FSPYLPGRLACAAAHDYGIAGCGTLLVLDQNESGLQIFRSFDWNDGLFDVTWSENNEHVL 320
Query: 332 ASSGTDRRLNVWDLSK------IGEEQSAE----DAEDGPPELLFIHG------------ 369
+ D L +WD +K + +E + E D E L + G
Sbjct: 321 VTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPT 500
Query: 370 ---------GHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
GH + I W+P+ P S S D ++IW +
Sbjct: 501 VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 626
>ref|NM_128855.1| photomorphogenesis repressor (COP1)
Length = 2323
Score = 85.1 bits (209), Expect = 1e-14
Identities = 74/282 (26%), Positives = 125/282 (44%)
Frame = +1
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 178
I H + + ++ + AT S + VFD++ ++P +C P + + K
Sbjct: 1141 IFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADM-QC-PIVEMSTRSKLS 1314
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 238
LSWN + K H+ S+ + V +WD++ + + H V +
Sbjct: 1315 C-LSWNKHEKNHIASSDYEGIVTVWDVTTR-------QSLMEYEEHEKRAWSVDFSRTEP 1470
Query: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 298
S+ S +DD K+ +W TR + ++D A + C+ +NP S +A GSAD +
Sbjct: 1471 SMLVSGSDDCKVKVWCTRQEASVI---NIDMK-ANICCVKYNPGSSNYIAVGSADHHIHY 1638
Query: 299 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 358
+DLRN+ LH F HK + V + +NE LAS+ TD L +WD+ +
Sbjct: 1639 YDLRNISQPLHVFSGHKKAVSYVKFLSNNE--LASASTDSTLRLWDV------------K 1776
Query: 359 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 400
D P F GHT + + N ++ C SE N + ++
Sbjct: 1777 DNLPVRTF--RGHTNEKNFVGLTVNSEYLACG-SETNEVYVY 1893
>ref|NM_008822.1| Mus musculus peroxisome biogenesis factor 7 (Pex7), mRNA
Length = 1468
Score = 85.1 bits (209), Expect = 1e-14
Identities = 52/175 (29%), Positives = 84/175 (47%), Gaps = 1/175 (0%)
Frame = +3
Query: 174 HQKEGYGLSWNSNLKGHLL-SASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVA 232
H +E Y + W+ L+ S S D TV +WD + G ++ F GH +V+
Sbjct: 405 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVG-------NSLCTFRGHESVIYSTI 563
Query: 233 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 292
W F S + DQ L IWD + T+ + AH E+ + Y+E ++ TG+
Sbjct: 564 WSPHIPGCFASASGDQTLRIWDVK---TTGVRIVIPAHQTEILSCDWCKYNENLVVTGAV 734
Query: 293 DKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
D ++ WDLRN++ + H I +V +SP + ++LAS D + W+ SK
Sbjct: 735 DCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 899
Score = 72.8 bits (177), Expect = 6e-11
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 1/227 (0%)
Frame = +3
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLH- 237
+ ++W+ N + L++ S D ++ LWD + K ++ H+ V V W
Sbjct: 288 FDVTWSENNEHVLVTCSGDGSLQLWDTA------KATGPLQVYKEHTQEVYSVDWSQTRG 449
Query: 238 ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 297
E L S + DQ + +WD T + H + + ++P+ A+ S D+T+
Sbjct: 450 EQLVVSGSWDQTVKVWDP---TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLR 620
Query: 298 LWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 357
+WD++ +++ +H+ EI W +NE ++ + D L WDL + +
Sbjct: 621 IWDVKTTGVRI-VIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVF---- 785
Query: 358 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 404
ELL GHT I ++P V+ S S D ++ W ++
Sbjct: 786 -----ELL----GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 899
Score = 69.3 bits (168), Expect = 6e-10
Identities = 44/173 (25%), Positives = 75/173 (42%)
Frame = +3
Query: 172 RGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDV 231
RGH+ Y W+ ++ G SAS D T+ +WD+ K + + H +
Sbjct: 531 RGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV-------KTTGVRIVIPAHQTEILSC 689
Query: 232 AWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 291
W +E+L + A D L WD R+ +P + HT + + F+P+ +LA+ S
Sbjct: 690 DWCKYNENLVVTGAVDCSLRGWDLRN--VRQPVFELLGHTYAIRRVKFSPFHASVLASCS 863
Query: 292 ADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 344
D TV W+ L + E H + + S + T +A D + ++D
Sbjct: 864 YDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCSWDETIKIYD 1022
Score = 42.7 bits (99), Expect = 0.063
Identities = 39/162 (24%), Positives = 61/162 (37%), Gaps = 38/162 (23%)
Frame = +3
Query: 279 FNPYSEFILATGSADK-------TVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETIL 331
F+PY LA +A T+ + D L++ D +F V WS +NE +L
Sbjct: 147 FSPYLPGRLACAAAQHYGIAGCGTLLVLDQNESGLQIFRSFDWNDGLFDVTWSENNEHVL 326
Query: 332 ASSGTDRRLNVWDLSK------IGEEQSAE----DAEDGPPELLFIHG------------ 369
+ D L +WD +K + +E + E D E L + G
Sbjct: 327 VTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPT 506
Query: 370 ---------GHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
GH + I W+P+ P S S D ++IW +
Sbjct: 507 VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 632
>gb|U69171.1|MMU69171 Mus musculus peroxisomal PTS2 receptor mRNA, complete cds
Length = 1468
Score = 85.1 bits (209), Expect = 1e-14
Identities = 52/175 (29%), Positives = 84/175 (47%), Gaps = 1/175 (0%)
Frame = +3
Query: 174 HQKEGYGLSWNSNLKGHLL-SASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVA 232
H +E Y + W+ L+ S S D TV +WD + G ++ F GH +V+
Sbjct: 405 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVG-------NSLCTFRGHESVIYSTI 563
Query: 233 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 292
W F S + DQ L IWD + T+ + AH E+ + Y+E ++ TG+
Sbjct: 564 WSPHIPGCFASASGDQTLRIWDVK---TTGVRIVIPAHQTEILSCDWCKYNENLVVTGAV 734
Query: 293 DKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
D ++ WDLRN++ + H I +V +SP + ++LAS D + W+ SK
Sbjct: 735 DCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 899
Score = 72.8 bits (177), Expect = 6e-11
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 1/227 (0%)
Frame = +3
Query: 179 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLH- 237
+ ++W+ N + L++ S D ++ LWD + K ++ H+ V V W
Sbjct: 288 FDVTWSENNEHVLVTCSGDGSLQLWDTA------KATGPLQVYKEHTQEVYSVDWSQTRG 449
Query: 238 ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 297
E L S + DQ + +WD T + H + + ++P+ A+ S D+T+
Sbjct: 450 EQLVVSGSWDQTVKVWDP---TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLR 620
Query: 298 LWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 357
+WD++ +++ +H+ EI W +NE ++ + D L WDL + +
Sbjct: 621 IWDVKTTGVRI-VIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVF---- 785
Query: 358 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 404
ELL GHT I ++P V+ S S D ++ W ++
Sbjct: 786 -----ELL----GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 899
Score = 69.3 bits (168), Expect = 6e-10
Identities = 44/173 (25%), Positives = 75/173 (42%)
Frame = +3
Query: 172 RGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDV 231
RGH+ Y W+ ++ G SAS D T+ +WD+ K + + H +
Sbjct: 531 RGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV-------KTTGVRIVIPAHQTEILSC 689
Query: 232 AWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 291
W +E+L + A D L WD R+ +P + HT + + F+P+ +LA+ S
Sbjct: 690 DWCKYNENLVVTGAVDCSLRGWDLRN--VRQPVFELLGHTYAIRRVKFSPFHASVLASCS 863
Query: 292 ADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 344
D TV W+ L + E H + + S + T +A D + ++D
Sbjct: 864 YDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCSWDETIKIYD 1022
Score = 42.7 bits (99), Expect = 0.063
Identities = 39/162 (24%), Positives = 61/162 (37%), Gaps = 38/162 (23%)
Frame = +3
Query: 279 FNPYSEFILATGSADK-------TVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETIL 331
F+PY LA +A T+ + D L++ D +F V WS +NE +L
Sbjct: 147 FSPYLPGRLACAAAQHYGIAGCGTLLVLDQNESGLQIFRSFDWNDGLFDVTWSENNEHVL 326
Query: 332 ASSGTDRRLNVWDLSK------IGEEQSAE----DAEDGPPELLFIHG------------ 369
+ D L +WD +K + +E + E D E L + G
Sbjct: 327 VTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPT 506
Query: 370 ---------GHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
GH + I W+P+ P S S D ++IW +
Sbjct: 507 VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 632
>gb|AY051695.1| Drosophila melanogaster LD24014 full length cDNA
Length = 2740
Score = 85.1 bits (209), Expect = 1e-14
Identities = 63/230 (27%), Positives = 106/230 (45%), Gaps = 1/230 (0%)
Frame = +1
Query: 172 RGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDV 231
+ H++ G+S+ S +S SDD T+ +WD +E + GH A V+ V
Sbjct: 841 QAHKEAIRGISF-SPTDSKFVSGSDDGTLRIWDFMRCQEE-------RVLRGHGADVKCV 996
Query: 232 AWHLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
WH + GS + Q + IWD +S H AH + V L +N + L T
Sbjct: 997 HWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLH---AHKSTVMDLKWNDNGNW-LVTA 1164
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 350
S D + L+D+RNL+ ++ F HK E V W P +E + S G+D + W+ +G
Sbjct: 1165 SRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWN---VGT 1335
Query: 351 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 400
++ E+ + H + + +W+P ++CS S D+ ++ W
Sbjct: 1336 DK----------EIGCVETAHDSIVWTLAWHP-LGHILCSGSNDHTIKFW 1452
Score = 58.5 bits (140), Expect = 1e-06
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 2/176 (1%)
Frame = +1
Query: 238 ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD--KT 295
+S F S +DD L IWD + + H A+V C+ ++P I++ GS D +
Sbjct: 886 DSKFVSGSDDGTLRIWDFMR---CQEERVLRGHGADVKCVHWHPQKGMIVS-GSKDNQQP 1053
Query: 296 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 355
+ +WD ++ + L + +HK + + W+ + ++ +S D L ++D+ + EE
Sbjct: 1054 IKIWDPKS-GIALATLHAHKSTVMDLKWNDNGNWLVTAS-RDHLLKLFDIRNLREEVQ-- 1221
Query: 356 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 411
+ GH + S SW+P + CS D + W N+ D+E
Sbjct: 1222 -----------VFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFW----NVGTDKE 1344
Score = 44.3 bits (103), Expect = 0.022
Identities = 28/117 (23%), Positives = 52/117 (43%), Gaps = 1/117 (0%)
Frame = +1
Query: 172 RGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDV 231
RGH+KE +SW+ +G S D ++ W++ + G + T H ++V +
Sbjct: 1228 RGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIG------CVETAHDSIVWTL 1389
Query: 232 AWHLLHESLFGSVADDQKLMIWD-TRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFIL 287
AWH L L S ++D + W R + ++++ A + L Y + I+
Sbjct: 1390 AWHPLGHILC-SGSNDHTIKFWTRNRPGDLMRDKYNLNTLPASLAALDECEYDDAII 1557
>gb|U75309.1|HSU75309 Human TBP-associated factor (hTAFII100) mRNA, partial cds
Length = 2443
Score = 84.0 bits (206), Expect = 2e-14
Identities = 72/250 (28%), Positives = 113/250 (44%), Gaps = 3/250 (1%)
Frame = +1
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
L GH YG S++ + + +LLS+S+D TV LW + + GH+ V D
Sbjct: 1618 LYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQT-------FTCLVGYKGHNYPVWD 1773
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
+ + F S D+ +W T +P H A+VNC F+P S ++ ATG
Sbjct: 1774 TQFSP-YGYYFVSGGHDRVARLWATDHY---QPLRIFAGHLADVNCTRFHPNSNYV-ATG 1938
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS---K 347
SAD+TV LWD+ N + F HK I + +SP N LA+ TD R+ +WD+
Sbjct: 1939 SADRTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLM 2112
Query: 348 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 407
+GE + GHT + ++ + ++ S S DN +++W +
Sbjct: 2113 VGELK-----------------GHTDTVCSLRFS-RDGEILASGSMDNTVRLWDAIKAFE 2238
Query: 408 NDEEPDIAAA 417
+ E D A
Sbjct: 2239 DLETDDFTTA 2268
>ref|NM_128165.1| expressed protein
Length = 1338
Score = 84.0 bits (206), Expect = 2e-14
Identities = 69/252 (27%), Positives = 118/252 (46%), Gaps = 19/252 (7%)
Frame = +1
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
L GH+ E +SWN++ L + S D +V +W++ EG D A+ TGH+ V+
Sbjct: 439 LEGHENEVKSVSWNAS-GSCLATCSRDKSVWIWEVL----EGNEYDCAAVLTGHTQDVKM 603
Query: 231 VAWHLLHESLFGSVADDQKLMIW-----DTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEF 285
V WH + LF S + D + +W D S + H++ V +SFN +
Sbjct: 604 VQWHPTMDVLF-SCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGD- 777
Query: 286 ILATGSADKTVALW--DLRNLK--------LKLHSFESHKDE-IFQVHWSPHNETILASS 334
+ T S D T+ +W D+ ++ + L + + D I+ HWS + I+AS
Sbjct: 778 KMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWS--RDDIIASG 951
Query: 335 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI--HGGHTAKISDFSWNPNE-PWVICSV 391
D + ++ SK D+ DGP L + + H ++ W+P E ++ S
Sbjct: 952 AGDNAIRLFVDSK-------HDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASA 1110
Query: 392 SEDNIMQIWQMA 403
S+D +++IWQ+A
Sbjct: 1111SDDGMVKIWQLA 1146
Score = 44.7 bits (104), Expect = 0.017
Identities = 38/148 (25%), Positives = 63/148 (41%), Gaps = 10/148 (6%)
Frame = +1
Query: 267 VDAHTAEVNCLSFNPYSEF------ILATGSADKTVALWDLRNLK----LKLHSFESHKD 316
++ HT V +++NP S ILA+ S D TV +W+ +L K E+H
Sbjct: 145 LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTR 324
Query: 317 EIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKIS 376
+ WSP + +LA++ D +W G E E + GH ++
Sbjct: 325 TVRSCAWSPSGQ-LLATASFDGTTGIW--KNYGSEF----------ECISTLEGHENEVK 465
Query: 377 DFSWNPNEPWVICSVSEDNIMQIWQMAE 404
SWN + + + S D + IW++ E
Sbjct: 466 SVSWNASGS-CLATCSRDKSVWIWEVLE 546
Score = 38.1 bits (87), Expect = 1.6
Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Frame = +1
Query: 302 RNLKL-KLHSFESHKDEIFQVHWSPHN------ETILASSGTDRRLNVWDLSKIGEEQSA 354
+NL+L ++ E H D ++ V W+P + ILAS D + +W+ S + +
Sbjct: 115 KNLELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTC 294
Query: 355 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 401
+ + HT + +W+P+ ++ + S D IW+
Sbjct: 295 KTV---------LEETHTRTVRSCAWSPSGQ-LLATASFDGTTGIWK 405
>ref|NM_122250.1| putative protein
Length = 2769
Score = 84.0 bits (206), Expect = 2e-14
Identities = 76/258 (29%), Positives = 116/258 (44%)
Frame = +1
Query: 144 SADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLW 203
S+ VLV H G+ N L L GH ++++++ + + + + T+ LW
Sbjct: 82 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDAS-EVLVAAGAASGTIKLW 258
Query: 204 DISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 263
D+ +E KIV TGH + V +H E F S + D L IWD R
Sbjct: 259 DL----EEAKIVRT---LTGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRKKGCI-- 408
Query: 264 SHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHW 323
H+ HT VN L F P ++++ G D V +WDL KL L F+SH+ +I + +
Sbjct: 409 -HTYKGHTRGVNVLRFTPDGRWVVS-GGEDNIVKVWDLTAGKL-LTEFKSHEGQIQSLDF 579
Query: 324 SPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPN 383
PH E +LA+ DR + WDL EL+ G TA + S+NP+
Sbjct: 580 HPH-EFLLATGSADRTVKFWDLETF--------------ELIGSGGPETAGVRCLSFNPD 714
Query: 384 EPWVICSVSEDNIMQIWQ 401
V+C + E + W+
Sbjct: 715 GKTVLCGLQESLKIFSWE 768
Score = 55.1 bits (131), Expect = 1e-05
Identities = 42/176 (23%), Positives = 65/176 (36%), Gaps = 42/176 (23%)
Frame = +1
Query: 269 AHTAEVNCLSFN------------------------------------------PYSEFI 286
AH+A VNCL SE +
Sbjct: 40 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVL 219
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 346
+A G+A T+ LWDL K+ + + H+ V + P E AS D L +WD+
Sbjct: 220 VAAGAASGTIKLWDLEEAKI-VRTLTGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIR 393
Query: 347 KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
K G + + GHT ++ + P+ WV+ S EDNI+++W +
Sbjct: 394 KKG--------------CIHTYKGHTRGVNVLRFTPDGRWVV-SGGEDNIVKVWDL 516
>ref|NM_006951.1| Homo sapiens TATA box binding protein (TBP)-associated factor, RNA
polymerase II, D, 100kD (TAF2D), mRNA
Length = 3089
Score = 84.0 bits (206), Expect = 2e-14
Identities = 72/250 (28%), Positives = 113/250 (44%), Gaps = 3/250 (1%)
Frame = +3
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
L GH YG S++ + + +LLS+S+D TV LW + + GH+ V D
Sbjct: 1638 LYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQT-------FTCLVGYKGHNYPVWD 1793
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
+ + F S D+ +W T +P H A+VNC F+P S ++ ATG
Sbjct: 1794 TQFSP-YGYYFVSGGHDRVARLWATDHY---QPLRIFAGHLADVNCTRFHPNSNYV-ATG 1958
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS---K 347
SAD+TV LWD+ N + F HK I + +SP N LA+ TD R+ +WD+
Sbjct: 1959 SADRTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLM 2132
Query: 348 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 407
+GE + GHT + ++ + ++ S S DN +++W +
Sbjct: 2133 VGELK-----------------GHTDTVCSLRFS-RDGEILASGSMDNTVRLWDAIKAFE 2258
Query: 408 NDEEPDIAAA 417
+ E D A
Sbjct: 2259 DLETDDFTTA 2288
>emb|X95525.1|HSTAFII10 H.sapiens mRNA for TAFII100 protein
Length = 3089
Score = 84.0 bits (206), Expect = 2e-14
Identities = 72/250 (28%), Positives = 113/250 (44%), Gaps = 3/250 (1%)
Frame = +3
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
L GH YG S++ + + +LLS+S+D TV LW + + GH+ V D
Sbjct: 1638 LYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQT-------FTCLVGYKGHNYPVWD 1793
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
+ + F S D+ +W T +P H A+VNC F+P S ++ ATG
Sbjct: 1794 TQFSP-YGYYFVSGGHDRVARLWATDHY---QPLRIFAGHLADVNCTRFHPNSNYV-ATG 1958
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS---K 347
SAD+TV LWD+ N + F HK I + +SP N LA+ TD R+ +WD+
Sbjct: 1959 SADRTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLM 2132
Query: 348 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 407
+GE + GHT + ++ + ++ S S DN +++W +
Sbjct: 2133 VGELK-----------------GHTDTVCSLRFS-RDGEILASGSMDNTVRLWDAIKAFE 2258
Query: 408 NDEEPDIAAA 417
+ E D A
Sbjct: 2259 DLETDDFTTA 2288
>gb|U80191.1|HSU80191 Human TFIID subunit TAFII100 mRNA, complete cds
Length = 2751
Score = 84.0 bits (206), Expect = 2e-14
Identities = 72/250 (28%), Positives = 113/250 (44%), Gaps = 3/250 (1%)
Frame = +3
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
L GH YG S++ + + +LLS+S+D TV LW + + GH+ V D
Sbjct: 1629 LYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQT-------FTCLVGYKGHNYPVWD 1784
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
+ + F S D+ +W T +P H A+VNC F+P S ++ ATG
Sbjct: 1785 TQFSP-YGYYFVSGGHDRVARLWATDHY---QPLRIFAGHLADVNCTRFHPNSNYV-ATG 1949
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS---K 347
SAD+TV LWD+ N + F HK I + +SP N LA+ TD R+ +WD+
Sbjct: 1950 SADRTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLM 2123
Query: 348 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 407
+GE + GHT + ++ + ++ S S DN +++W +
Sbjct: 2124 VGELK-----------------GHTDTVCSLRFS-RDGEILASGSMDNTVRLWDAIKAFE 2249
Query: 408 NDEEPDIAAA 417
+ E D A
Sbjct: 2250 DLETDDFTTA 2279
>ref|XM_031978.3| Homo sapiens TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 100 kD (TAF5), mRNA
Length = 3083
Score = 84.0 bits (206), Expect = 2e-14
Identities = 72/250 (28%), Positives = 113/250 (44%), Gaps = 3/250 (1%)
Frame = +3
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
L GH YG S++ + + +LLS+S+D TV LW + + GH+ V D
Sbjct: 1638 LYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQT-------FTCLVGYKGHNYPVWD 1793
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
+ + F S D+ +W T +P H A+VNC F+P S ++ ATG
Sbjct: 1794 TQFSP-YGYYFVSGGHDRVARLWATDHY---QPLRIFAGHLADVNCTRFHPNSNYV-ATG 1958
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS---K 347
SAD+TV LWD+ N + F HK I + +SP N LA+ TD R+ +WD+
Sbjct: 1959 SADRTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLM 2132
Query: 348 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 407
+GE + GHT + ++ + ++ S S DN +++W +
Sbjct: 2133 VGELK-----------------GHTDTVCSLRFS-RDGEILASGSMDNTVRLWDAIKAFE 2258
Query: 408 NDEEPDIAAA 417
+ E D A
Sbjct: 2259 DLETDDFTTA 2288
>gb|AF242546.1|AF242546 Homo sapiens YTM1 mRNA, complete cds
Length = 1663
Score = 83.2 bits (204), Expect = 4e-14
Identities = 53/174 (30%), Positives = 89/174 (50%)
Frame = +2
Query: 167 PDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSA 226
P + L GH + + W+ + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 878 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVESG-------SLKSTLTGNK- 1027
Query: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 286
V +++ L + L S + D+ + +WD R+ S S S+ +HT V + ++P E
Sbjct: 1028 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSMVSLSLTSHTGWVTSVKWSPTHEQQ 1204
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRL 340
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1205 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1360
Score = 57.8 bits (138), Expect = 2e-06
Identities = 45/170 (26%), Positives = 70/170 (40%), Gaps = 9/170 (5%)
Frame = +2
Query: 222 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNP 281
+GH V V W E S + D + +WD S + S NC+S++P
Sbjct: 893 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVESGSLK----STLTGNKVFNCISYSP 1054
Query: 282 YSEFILATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVHWSPHNETILASSGTDRR 339
+ LA+GS D+ + LWD R + S SH + V WSP +E L S D
Sbjct: 1055 LCKR-LASGSTDRHIRLWDPRTKDGSMVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1231
Query: 340 LNVWD-------LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 382
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1232 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1381
Score = 55.1 bits (131), Expect = 1e-05
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Frame = +2
Query: 173 GHQKEGYGLSW--NSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
GH ++W +L LLSAS D T+ LW+ + E V A GH+ V+
Sbjct: 545 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNV---ERNKVKALHCCRGHAGSVDS 715
Query: 231 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHSV 267
+A + F S + D+ L IW T + T P ++
Sbjct: 716 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 892
Query: 268 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VHWSPH 326
H V+ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 893 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESGSLK-STLTGNK--VFNCISYSPL 1057
Query: 327 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 386
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1058CKR-LASGSTDRHIRLWD----------PRTKDGSMVSLSLTS-HTGWVTSVKWSPTHEQ 1201
Query: 387 VICSVSEDNIMQIW 400
+ S S DNI+++W
Sbjct: 1202QLISGSLDNIVKLW 1243
>gb|AF250048.1|AF250048 Zea mays WD-repeat protein RBAP2 (rbap2) gene, partial cds
Length = 851
Score = 83.2 bits (204), Expect = 4e-14
Identities = 62/175 (35%), Positives = 86/175 (48%), Gaps = 2/175 (1%)
Frame = +2
Query: 5 EVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHW 64
E+ E + + E Y WK P LYD H L WPSL+ +W P + K+ +
Sbjct: 302 EMKERSSSSAAVDERYPQWKSLIPVLYDWFANHNLVWPSLSCRWGPQFEKATYKNRQRLY 481
Query: 65 LVLGTHTSDEQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGE 124
L T S N LV+A ++ + +++ S+ E V K +T I H GE
Sbjct: 482 LSEQTDGS-VPNTLVIANCEVVKP-RVAAAEHISQFNEEARSPFVK-KYKT---IVHPGE 643
Query: 125 VNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSG--ECNPDLRLRGHQKE 177
VNR R +PQN IIAT T S DVLV+D P++ G E PDL L GH+++
Sbjct: 644 VNRIRELPQNSKIIATHTDSPDVLVWDVEAQPNRHAVLGASESRPDLILTGHKED 808
>ref|XM_087024.1| Homo sapiens WD repeat domain 12 (WDR12), mRNA
Length = 1720
Score = 82.8 bits (203), Expect = 5e-14
Identities = 53/174 (30%), Positives = 89/174 (50%)
Frame = +1
Query: 167 PDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSA 226
P + L GH + + W+ + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 940 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVESG-------SLKSTLTGNK- 1089
Query: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 286
V +++ L + L S + D+ + +WD R+ S S S+ +HT V + ++P E
Sbjct: 1090 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1266
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRL 340
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1267 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1422
Score = 58.5 bits (140), Expect = 1e-06
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 9/170 (5%)
Frame = +1
Query: 222 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNP 281
+GH V V W E S + D + +WD S + S NC+S++P
Sbjct: 955 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVESGSLK----STLTGNKVFNCISYSP 1116
Query: 282 YSEFILATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVHWSPHNETILASSGTDRR 339
+ LA+GS D+ + LWD R L S SH + V WSP +E L S D
Sbjct: 1117 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1293
Query: 340 LNVWD-------LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 382
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1294 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1443
Score = 54.7 bits (130), Expect = 2e-05
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Frame = +1
Query: 173 GHQKEGYGLSW--NSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
GH ++W +L LLSAS D T+ LW+ + E V A GH+ V+
Sbjct: 607 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNV---ERNKVKALHCCRGHAGSVDS 777
Query: 231 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHSV 267
+A + F S + D+ L IW T + T P ++
Sbjct: 778 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 954
Query: 268 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VHWSPH 326
H V+ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 955 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESGSLK-STLTGNK--VFNCISYSPL 1119
Query: 327 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 386
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1120CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1263
Query: 387 VICSVSEDNIMQIW 400
+ S S DNI+++W
Sbjct: 1264QLISGSLDNIVKLW 1305
>ref|NM_018256.2| Homo sapiens WD repeat domain 12 (WDR12), mRNA
Length = 1720
Score = 82.8 bits (203), Expect = 5e-14
Identities = 53/174 (30%), Positives = 89/174 (50%)
Frame = +1
Query: 167 PDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSA 226
P + L GH + + W+ + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 940 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVGSG-------SLKSTLTGNK- 1089
Query: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 286
V +++ L + L S + D+ + +WD R+ S S S+ +HT V + ++P E
Sbjct: 1090 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1266
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRL 340
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1267 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1422
Score = 57.8 bits (138), Expect = 2e-06
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 9/170 (5%)
Frame = +1
Query: 222 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNP 281
+GH V V W E S + D + +WD S + S NC+S++P
Sbjct: 955 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVGSGSLK----STLTGNKVFNCISYSP 1116
Query: 282 YSEFILATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVHWSPHNETILASSGTDRR 339
+ LA+GS D+ + LWD R L S SH + V WSP +E L S D
Sbjct: 1117 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1293
Query: 340 LNVWD-------LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 382
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1294 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1443
Score = 53.9 bits (128), Expect = 3e-05
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Frame = +1
Query: 173 GHQKEGYGLSW--NSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
GH ++W +L LLSAS D T+ LW+ + E V A GH+ V+
Sbjct: 607 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNV---ERNKVKALHCCRGHAGSVDS 777
Query: 231 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHSV 267
+A + F S + D+ L IW T + T P ++
Sbjct: 778 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 954
Query: 268 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VHWSPH 326
H V+ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 955 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVGSGSLK-STLTGNK--VFNCISYSPL 1119
Query: 327 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 386
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1120CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1263
Query: 387 VICSVSEDNIMQIW 400
+ S S DNI+++W
Sbjct: 1264QLISGSLDNIVKLW 1305
>dbj|AK022782.1|AK022782 Homo sapiens cDNA FLJ12720 fis, clone NT2RP1001302, weakly similar to
MICROTUBULE-ASSOCIATED PROTEIN YTM1
Length = 1720
Score = 82.8 bits (203), Expect = 5e-14
Identities = 53/174 (30%), Positives = 89/174 (50%)
Frame = +1
Query: 167 PDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSA 226
P + L GH + + W+ + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 940 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVGSG-------SLKSTLTGNK- 1089
Query: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 286
V +++ L + L S + D+ + +WD R+ S S S+ +HT V + ++P E
Sbjct: 1090 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1266
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRL 340
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1267 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1422
Score = 57.8 bits (138), Expect = 2e-06
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 9/170 (5%)
Frame = +1
Query: 222 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNP 281
+GH V V W E S + D + +WD S + S NC+S++P
Sbjct: 955 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVGSGSLK----STLTGNKVFNCISYSP 1116
Query: 282 YSEFILATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVHWSPHNETILASSGTDRR 339
+ LA+GS D+ + LWD R L S SH + V WSP +E L S D
Sbjct: 1117 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1293
Query: 340 LNVWD-------LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 382
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1294 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1443
Score = 53.9 bits (128), Expect = 3e-05
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Frame = +1
Query: 173 GHQKEGYGLSW--NSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
GH ++W +L LLSAS D T+ LW+ + E V A GH+ V+
Sbjct: 607 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNV---ERNKVKALHCCRGHAGSVDS 777
Query: 231 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHSV 267
+A + F S + D+ L IW T + T P ++
Sbjct: 778 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 954
Query: 268 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VHWSPH 326
H V+ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 955 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVGSGSLK-STLTGNK--VFNCISYSPL 1119
Query: 327 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 386
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1120CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1263
Query: 387 VICSVSEDNIMQIW 400
+ S S DNI+++W
Sbjct: 1264QLISGSLDNIVKLW 1305
>dbj|AK022781.1|AK022781 Homo sapiens cDNA FLJ12719 fis, clone NT2RP1001294, weakly similar to
MICROTUBULE-ASSOCIATED PROTEIN YTM1
Length = 1720
Score = 82.8 bits (203), Expect = 5e-14
Identities = 53/174 (30%), Positives = 89/174 (50%)
Frame = +1
Query: 167 PDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSA 226
P + L GH + + W+ + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 940 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVGSG-------SLKSTLTGNK- 1089
Query: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 286
V +++ L + L S + D+ + +WD R+ S S S+ +HT V + ++P E
Sbjct: 1090 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1266
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRL 340
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1267 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1422
Score = 57.8 bits (138), Expect = 2e-06
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 9/170 (5%)
Frame = +1
Query: 222 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNP 281
+GH V V W E S + D + +WD S + S NC+S++P
Sbjct: 955 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVGSGSLK----STLTGNKVFNCISYSP 1116
Query: 282 YSEFILATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVHWSPHNETILASSGTDRR 339
+ LA+GS D+ + LWD R L S SH + V WSP +E L S D
Sbjct: 1117 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1293
Query: 340 LNVWD-------LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 382
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1294 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1443
Score = 53.9 bits (128), Expect = 3e-05
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Frame = +1
Query: 173 GHQKEGYGLSW--NSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
GH ++W +L LLSAS D T+ LW+ + E V A GH+ V+
Sbjct: 607 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNV---ERNKVKALHCCRGHAGSVDS 777
Query: 231 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHSV 267
+A + F S + D+ L IW T + T P ++
Sbjct: 778 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 954
Query: 268 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VHWSPH 326
H V+ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 955 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVGSGSLK-STLTGNK--VFNCISYSPL 1119
Query: 327 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 386
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1120CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1263
Query: 387 VICSVSEDNIMQIW 400
+ S S DNI+++W
Sbjct: 1264QLISGSLDNIVKLW 1305
>dbj|AK001743.1|AK001743 Homo sapiens cDNA FLJ10881 fis, clone NT2RP4001927, weakly similar to
MICROTUBULE-ASSOCIATED PROTEIN YTM1
Length = 1707
Score = 82.8 bits (203), Expect = 5e-14
Identities = 53/174 (30%), Positives = 89/174 (50%)
Frame = +2
Query: 167 PDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSA 226
P + L GH + + W+ + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 932 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVESG-------SLKSTLTGNK- 1081
Query: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 286
V +++ L + L S + D+ + +WD R+ S S S+ +HT V + ++P E
Sbjct: 1082 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1258
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRL 340
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1259 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1414
Score = 58.5 bits (140), Expect = 1e-06
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 9/170 (5%)
Frame = +2
Query: 222 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNP 281
+GH V V W E S + D + +WD S + S NC+S++P
Sbjct: 947 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVESGSLK----STLTGNKVFNCISYSP 1108
Query: 282 YSEFILATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVHWSPHNETILASSGTDRR 339
+ LA+GS D+ + LWD R L S SH + V WSP +E L S D
Sbjct: 1109 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1285
Query: 340 LNVWD-------LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 382
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1286 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1435
Score = 54.7 bits (130), Expect = 2e-05
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Frame = +2
Query: 173 GHQKEGYGLSW--NSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
GH ++W +L LLSAS D T+ LW+ + E V A GH+ V+
Sbjct: 599 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNV---ERNKVKALHCCRGHAGSVDS 769
Query: 231 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHSV 267
+A + F S + D+ L IW T + T P ++
Sbjct: 770 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 946
Query: 268 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VHWSPH 326
H V+ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 947 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESGSLK-STLTGNK--VFNCISYSPL 1111
Query: 327 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 386
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1112CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1255
Query: 387 VICSVSEDNIMQIW 400
+ S S DNI+++W
Sbjct: 1256QLISGSLDNIVKLW 1297
>dbj|AK056092.1|AK056092 Homo sapiens cDNA FLJ31530 fis, clone NT2RI2000578, highly similar to
Homo sapiens YTM1 mRNA
Length = 2275
Score = 82.8 bits (203), Expect = 5e-14
Identities = 53/174 (30%), Positives = 89/174 (50%)
Frame = +1
Query: 167 PDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSA 226
P + L GH + + W+ + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 1495 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVESG-------SLKSTLTGNK- 1644
Query: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 286
V +++ L + L S + D+ + +WD R+ S S S+ +HT V + ++P E
Sbjct: 1645 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1821
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRL 340
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1822 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1977
Score = 58.5 bits (140), Expect = 1e-06
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 9/170 (5%)
Frame = +1
Query: 222 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNP 281
+GH V V W E S + D + +WD S + S NC+S++P
Sbjct: 1510 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVESGSLK----STLTGNKVFNCISYSP 1671
Query: 282 YSEFILATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVHWSPHNETILASSGTDRR 339
+ LA+GS D+ + LWD R L S SH + V WSP +E L S D
Sbjct: 1672 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1848
Query: 340 LNVWD-------LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 382
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1849 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1998
Score = 54.7 bits (130), Expect = 2e-05
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Frame = +1
Query: 173 GHQKEGYGLSW--NSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
GH ++W +L LLSAS D T+ LW+ + E V A GH+ V+
Sbjct: 1162 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNV---ERNKVKALHCCRGHAGSVDS 1332
Query: 231 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHSV 267
+A + F S + D+ L IW T + T P ++
Sbjct: 1333 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 1509
Query: 268 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VHWSPH 326
H V+ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 1510 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESGSLK-STLTGNK--VFNCISYSPL 1674
Query: 327 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 386
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1675 CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1818
Query: 387 VICSVSEDNIMQIW 400
+ S S DNI+++W
Sbjct: 1819 QLISGSLDNIVKLW 1860
>gb|BC008082.1|BC008082 Homo sapiens, clone MGC:835 IMAGE:3050219, mRNA, complete cds
Length = 1681
Score = 82.8 bits (203), Expect = 5e-14
Identities = 53/174 (30%), Positives = 89/174 (50%)
Frame = +2
Query: 167 PDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSA 226
P + L GH + + W+ + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 884 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVESG-------SLKSTLTGNK- 1033
Query: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 286
V +++ L + L S + D+ + +WD R+ S S S+ +HT V + ++P E
Sbjct: 1034 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1210
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRL 340
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1211 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1366
Score = 58.5 bits (140), Expect = 1e-06
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 9/170 (5%)
Frame = +2
Query: 222 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNP 281
+GH V V W E S + D + +WD S + S NC+S++P
Sbjct: 899 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVESGSLK----STLTGNKVFNCISYSP 1060
Query: 282 YSEFILATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVHWSPHNETILASSGTDRR 339
+ LA+GS D+ + LWD R L S SH + V WSP +E L S D
Sbjct: 1061 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1237
Query: 340 LNVWD-------LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 382
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1238 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1387
Score = 54.7 bits (130), Expect = 2e-05
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Frame = +2
Query: 173 GHQKEGYGLSW--NSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
GH ++W +L LLSAS D T+ LW+ + E V A GH+ V+
Sbjct: 551 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNV---ERNKVKALHCCRGHAGSVDS 721
Query: 231 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHSV 267
+A + F S + D+ L IW T + T P ++
Sbjct: 722 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 898
Query: 268 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VHWSPH 326
H V+ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 899 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESGSLK-STLTGNK--VFNCISYSPL 1063
Query: 327 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 386
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1064CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1207
Query: 387 VICSVSEDNIMQIW 400
+ S S DNI+++W
Sbjct: 1208QLISGSLDNIVKLW 1249
>gb|AF029984.1|AF029984 Lycopersicon esculentum COP1 homolog (COP1) mRNA, complete cds
Length = 2373
Score = 81.6 bits (200), Expect = 1e-13
Identities = 60/225 (26%), Positives = 102/225 (44%)
Frame = +1
Query: 121 HEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 180
H + + ++ + AT S + VFD++ ++P C P + + K
Sbjct: 1144 HSANIVSSIEFDRDDELFATAGVSRRIKVFDFSSVVNEP-ADAHC-PVVEMSTRSKLSC- 1314
Query: 181 LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 240
LSWN K H+ S+ D V +WD++ + + H V + S+
Sbjct: 1315 LSWNKYTKNHIASSDYDGIVTVWDVTTRQSVME-------YEEHEKRAWSVDFSRTEPSM 1473
Query: 241 FGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 300
S +DD K+ +W T+ + ++D A + C+ +NP S +A GSAD + +D
Sbjct: 1474 LVSGSDDCKVKVWCTKQEASVL---NIDMK-ANICCVKYNPGSSVHIAVGSADHHIHYYD 1641
Query: 301 LRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 345
LRN +H F H+ + V + +NE LAS+ TD L +WD+
Sbjct: 1642 LRNTSQPVHIFSGHRKAVSYVKFLSNNE--LASASTDSTLRLWDV 1770
>dbj|AK016611.1|AK016611 Mus musculus adult male testis cDNA, RIKEN full-length enriched
library, clone:4933402C23:WD repeat domain 12, full
insert sequence
Length = 2781
Score = 81.6 bits (200), Expect = 1e-13
Identities = 54/180 (30%), Positives = 91/180 (50%)
Frame = +2
Query: 167 PDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSA 226
P + L GH + + W+ + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 959 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESG-------GLKSTLTGNK- 1108
Query: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 286
V +++ L + L S + D+ + +WD R+ S S S+ +HT V + ++P E
Sbjct: 1109 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1285
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 346
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1286 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1459
Score = 55.1 bits (131), Expect = 1e-05
Identities = 64/254 (25%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +2
Query: 173 GHQKEGYGLSW--NSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
GH ++W +L LL+AS D TV LW+ + E V A GH+ V+
Sbjct: 626 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNV---EKNKVKALHCCRGHAGSVDA 796
Query: 231 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHSV 267
+A + F S + D+ L IW T + T P ++
Sbjct: 797 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 973
Query: 268 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VHWSPH 326
HT ++ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 974 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 1138
Query: 327 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 386
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1139CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1282
Query: 387 VICSVSEDNIMQIW 400
+ S S DNI+++W
Sbjct: 1283QLISGSLDNIVKLW 1324
>dbj|AK007500.1|AK007500 Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
enriched library, clone:1810014N03:WD repeat domain 12,
full insert sequence
Length = 1427
Score = 81.6 bits (200), Expect = 1e-13
Identities = 54/180 (30%), Positives = 91/180 (50%)
Frame = +3
Query: 167 PDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSA 226
P + L GH + + W+ + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 882 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESG-------GLKSTLTGNK- 1031
Query: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 286
V +++ L + L S + D+ + +WD R+ S S S+ +HT V + ++P E
Sbjct: 1032 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1208
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 346
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1209 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1382
Score = 55.1 bits (131), Expect = 1e-05
Identities = 64/254 (25%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +3
Query: 173 GHQKEGYGLSW--NSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
GH ++W +L LL+AS D TV LW+ + E V A GH+ V+
Sbjct: 549 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNV---EKNKVKALHCCRGHAGSVDA 719
Query: 231 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHSV 267
+A + F S + D+ L IW T + T P ++
Sbjct: 720 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 896
Query: 268 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VHWSPH 326
HT ++ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 897 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 1061
Query: 327 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 386
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1062CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1205
Query: 387 VICSVSEDNIMQIW 400
+ S S DNI+++W
Sbjct: 1206QLISGSLDNIVKLW 1247
>gb|BC004748.1|BC004748 Mus musculus, WD repeat domain 12, clone MGC:7936 IMAGE:3583955,
mRNA, complete cds
Length = 1512
Score = 81.6 bits (200), Expect = 1e-13
Identities = 54/180 (30%), Positives = 91/180 (50%)
Frame = +3
Query: 167 PDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSA 226
P + L GH + + W+ + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 939 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESG-------GLKSTLTGNK- 1088
Query: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 286
V +++ L + L S + D+ + +WD R+ S S S+ +HT V + ++P E
Sbjct: 1089 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1265
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 346
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1266 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1439
Score = 55.1 bits (131), Expect = 1e-05
Identities = 64/254 (25%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +3
Query: 173 GHQKEGYGLSW--NSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
GH ++W +L LL+AS D TV LW+ + E V A GH+ V+
Sbjct: 606 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNV---EKNKVKALHCCRGHAGSVDA 776
Query: 231 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHSV 267
+A + F S + D+ L IW T + T P ++
Sbjct: 777 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 953
Query: 268 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VHWSPH 326
HT ++ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 954 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 1118
Query: 327 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 386
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1119CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1262
Query: 387 VICSVSEDNIMQIW 400
+ S S DNI+++W
Sbjct: 1263QLISGSLDNIVKLW 1304
>gb|AY059432.1| Mus musculus MTA.A10.069 WD repeat domain 12 (Wdr12) mRNA, partial
cds
Length = 650
Score = 81.6 bits (200), Expect = 1e-13
Identities = 54/180 (30%), Positives = 91/180 (50%)
Frame = +2
Query: 167 PDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSA 226
P + L GH + + W+ + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 101 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESG-------GLKSTLTGNK- 250
Query: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 286
V +++ L + L S + D+ + +WD R+ S S S+ +HT V + ++P E
Sbjct: 251 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 427
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 346
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 428 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 601
Score = 44.7 bits (104), Expect = 0.017
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
Frame = +2
Query: 260 TSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIF 319
T P ++ HT ++ + ++ E + + S D T+ +WD+ + LK + +K +F
Sbjct: 92 TRTPLVTLSGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VF 256
Query: 320 Q-VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF 378
+ +SP + LAS TDR + +WD +DG L + HT ++
Sbjct: 257 NCISYSPLCKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSV 400
Query: 379 SWNPNEPWVICSVSEDNIMQIW 400
W+P + S S DNI+++W
Sbjct: 401 KWSPTHEQQLISGSLDNIVKLW 466
>gb|AY059431.1| Mus musculus WD repeat domain 12 (Wdr12) mRNA, complete cds
Length = 1346
Score = 81.6 bits (200), Expect = 1e-13
Identities = 54/180 (30%), Positives = 91/180 (50%)
Frame = +1
Query: 167 PDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSA 226
P + L GH + + W+ + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 796 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESG-------GLKSTLTGNK- 945
Query: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 286
V +++ L + L S + D+ + +WD R+ S S S+ +HT V + ++P E
Sbjct: 946 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1122
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 346
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1123LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1296
Score = 55.1 bits (131), Expect = 1e-05
Identities = 64/254 (25%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +1
Query: 173 GHQKEGYGLSW--NSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
GH ++W +L LL+AS D TV LW+ + E V A GH+ V+
Sbjct: 463 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNV---EKNKVKALHCCRGHAGSVDA 633
Query: 231 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHSV 267
+A + F S + D+ L IW T + T P ++
Sbjct: 634 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 810
Query: 268 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VHWSPH 326
HT ++ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 811 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 975
Query: 327 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 386
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 976 CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1119
Query: 387 VICSVSEDNIMQIW 400
+ S S DNI+++W
Sbjct: 1120QLISGSLDNIVKLW 1161
>ref|NM_021312.1| Mus musculus WD repeat domain 12 (Wdr12), mRNA
Length = 1859
Score = 81.6 bits (200), Expect = 1e-13
Identities = 54/180 (30%), Positives = 91/180 (50%)
Frame = +3
Query: 167 PDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSA 226
P + L GH + + W+ + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 1284 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESG-------GLKSTLTGNK- 1433
Query: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 286
V +++ L + L S + D+ + +WD R+ S S S+ +HT V + ++P E
Sbjct: 1434 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1610
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 346
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1611 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1784
Score = 55.1 bits (131), Expect = 1e-05
Identities = 64/254 (25%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +3
Query: 173 GHQKEGYGLSW--NSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
GH ++W +L LL+AS D TV LW+ + E V A GH+ V+
Sbjct: 951 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNV---EKNKVKALHCCRGHAGSVDA 1121
Query: 231 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHSV 267
+A + F S + D+ L IW T + T P ++
Sbjct: 1122 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 1298
Query: 268 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VHWSPH 326
HT ++ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 1299 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 1463
Query: 327 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 386
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1464 CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1607
Query: 387 VICSVSEDNIMQIW 400
+ S S DNI+++W
Sbjct: 1608 QLISGSLDNIVKLW 1649
>dbj|AB041608.1|AB041608 Mus musculus brain cDNA, clone MNCb-5414, similar to Mus musculus
nuclear protein Ytm1p mRNA
Length = 1859
Score = 81.6 bits (200), Expect = 1e-13
Identities = 54/180 (30%), Positives = 91/180 (50%)
Frame = +3
Query: 167 PDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSA 226
P + L GH + + W+ + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 1284 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESG-------GLKSTLTGNK- 1433
Query: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 286
V +++ L + L S + D+ + +WD R+ S S S+ +HT V + ++P E
Sbjct: 1434 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1610
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 346
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1611 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1784
Score = 55.1 bits (131), Expect = 1e-05
Identities = 64/254 (25%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +3
Query: 173 GHQKEGYGLSW--NSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
GH ++W +L LL+AS D TV LW+ + E V A GH+ V+
Sbjct: 951 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNV---EKNKVKALHCCRGHAGSVDA 1121
Query: 231 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHSV 267
+A + F S + D+ L IW T + T P ++
Sbjct: 1122 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 1298
Query: 268 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VHWSPH 326
HT ++ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 1299 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 1463
Query: 327 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 386
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1464 CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1607
Query: 387 VICSVSEDNIMQIW 400
+ S S DNI+++W
Sbjct: 1608 QLISGSLDNIVKLW 1649
>gb|AF239765.1|AF239765 Mus musculus nuclear protein Ytm1p mRNA, complete cds
Length = 1304
Score = 81.6 bits (200), Expect = 1e-13
Identities = 54/180 (30%), Positives = 91/180 (50%)
Frame = +2
Query: 167 PDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSA 226
P + L GH + + W+ + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 761 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESG-------GLKSTLTGNK- 910
Query: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFI 286
V +++ L + L S + D+ + +WD R+ S S S+ +HT V + ++P E
Sbjct: 911 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1087
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 346
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1088LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1261
Score = 55.1 bits (131), Expect = 1e-05
Identities = 64/254 (25%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +2
Query: 173 GHQKEGYGLSW--NSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
GH ++W +L LL+AS D TV LW+ + E V A GH+ V+
Sbjct: 428 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNV---EKNKVKALHCCRGHAGSVDA 598
Query: 231 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHSV 267
+A + F S + D+ L IW T + T P ++
Sbjct: 599 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 775
Query: 268 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VHWSPH 326
HT ++ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 776 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 940
Query: 327 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 386
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 941 CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1084
Query: 387 VICSVSEDNIMQIW 400
+ S S DNI+++W
Sbjct: 1085QLISGSLDNIVKLW 1126
>ref|NM_106276.1| unknown protein
Length = 1159
Score = 81.3 bits (199), Expect = 2e-13
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 9/245 (3%)
Frame = +1
Query: 159 PDPSGECNPDL-----RLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGK 213
P+P G+ N L H + + W + L + D+ + W + + K +
Sbjct: 295 PEPYGQSNSSTLECVASLDAHVGKINCVLWCPSGNSDKLISMDEQNLVFWSLDSSKKSAE 474
Query: 214 IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAE 273
++ ++ HS + AW+ H+ + + + WD R T K ++S++ A
Sbjct: 475 VLSKESAGMRHS--LSGGAWNP-HDVNSVAATSESSIQFWDLR---TMKKNNSIER--AH 630
Query: 274 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILAS 333
V + +N E IL + + + LWDLR K + H + V +P E ++ S
Sbjct: 631 VRNVDYNLKREHILVSADDESGIHLWDLRKTKFPVQELPGHTHWTWAVRCNPEYEELILS 810
Query: 334 SGTDRRLNVWDLSKIGEEQSAEDAEDGPPE----LLFIHGGHTAKISDFSWNPNEPWVIC 389
GTD +N+W S E +++E + + LL + + + +W+ EPW+
Sbjct: 811 VGTDSAVNLWFASASSEHKTSESPVEASRQRVNPLLNSYTDYEDSVYGLAWSSREPWIFA 990
Query: 390 SVSED 394
S+S D
Sbjct: 991 SLSYD 1005
Score = 45.8 bits (107), Expect = 0.007
Identities = 49/214 (22%), Positives = 86/214 (39%), Gaps = 4/214 (1%)
Frame = +1
Query: 191 LLSASDDHTVCLWDISA--GPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQ 248
+ S D + +W I G ++ A H + V W S D+Q
Sbjct: 250 VFSTGDSYGAAIWQIPEPYGQSNSSTLECVASLDAHVGKINCVLWCPSGNSDKLISMDEQ 429
Query: 249 KLMIWDTRSNTTSKPSHSVDAHTAEVNCL--SFNPYSEFILATGSADKTVALWDLRNLKL 306
L+ W S+ S S ++ + ++NP+ +A S + ++ WDLR +K
Sbjct: 430 NLVFWSLDSSKKSAEVLSKESAGMRHSLSGGAWNPHDVNSVAATS-ESSIQFWDLRTMK- 603
Query: 307 KLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLF 366
K +S E + + V ++ E IL S+ + +++WDL K + ++ P
Sbjct: 604 KNNSIE--RAHVRNVDYNLKREHILVSADDESGIHLWDLRK-----TKFPVQELP----- 747
Query: 367 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 400
GHT NP +I SV D+ + +W
Sbjct: 748 ---GHTHWTWAVRCNPEYEELILSVGTDSAVNLW 840
>gb|AF115313.1|AF115313 Thermomonospora curvata PkwR (pkwR) and PkwA (pkwA) genes, complete
cds
Length = 4619
Score = 80.1 bits (196), Expect = 4e-13
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 41/254 (16%)
Frame = +1
Query: 191 LLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 250
L S SDD TV LWD++A + +A+F GH+ V D+A+ S+ S + D
Sbjct: 3595 LASGSDDATVRLWDVAAA-------EERAVFEGHTHYVLDIAFSP-DGSMVASGSRDGTA 3750
Query: 251 MIWDTRSNTTSKPSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-- 307
+W+ + T H+V HT V ++F+P + A+GS D T+ LWD+ K +
Sbjct: 3751 RLWNVATGT----EHAVLKGHTDYVYAVAFSPDGSMV-ASGSRDGTIRLWDVATGKERDV 3915
Query: 308 --------------------------------------LHSFESHKDEIFQVHWSPHNET 329
LH+FE H D + V +SP
Sbjct: 3916 LQAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDG-A 4092
Query: 330 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 389
+LAS DR + +WD++ E + E GHT + +++P E +
Sbjct: 4093 LLASGSDDRTIRLWDVAAQEEHTTLE--------------GHTEPVHSVAFHP-EGTTLA 4227
Query: 390 SVSEDNIMQIWQMA 403
S SED ++IW +A
Sbjct: 4228 SASEDGTIRIWPIA 4269
Score = 63.9 bits (154), Expect = 3e-08
Identities = 50/176 (28%), Positives = 88/176 (49%)
Frame = +1
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
L+GH Y ++++ + + S S D T+ LWD++ G KE ++ A A A D
Sbjct: 3790 LKGHTDYVYAVAFSPD-GSMVASGSRDGTIRLWDVATG-KERDVLQAPAENVVSLAFSPD 3963
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
+ L+H S D + +WD S + H+ + HT V ++F+P +LA+G
Sbjct: 3964 GSM-LVHGS-------DSTVHLWDVASG---EALHTFEGHTDWVRAVAFSPDGA-LLASG 4107
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 346
S D+T+ LWD+ + + + E H + + V + P T LAS+ D + +W ++
Sbjct: 4108 SDDRTIRLWDVA-AQEEHTTLEGHTEPVHSVAFHPEG-TTLASASEDGTIRIWPIA 4269
Score = 58.2 bits (139), Expect = 1e-06
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Frame = +1
Query: 256 RSNTTSKPSHSVDAHTA----------EVNCLSFNPYSEFILATGSADKTVALWDLRNLK 305
R ++++ PS S D H E ++F+P +LA GS DK + +WD+ +
Sbjct: 3349 RPDSSTAPSESADPHELNEPRILTTDREAVAVAFSPGGS-LLAGGSGDKLIHVWDVASGD 3525
Query: 306 LKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELL 365
+LH+ E H D + V +SP + +LAS D + +WD++ E E
Sbjct: 3526 -ELHTLEGHTDWVRAVAFSP-DGALLASGSDDATVRLWDVAAAEERAVFE---------- 3669
Query: 366 FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
GHT + D +++P+ ++ S S D ++W +A
Sbjct: 3670 ----GHTHYVLDIAFSPDGS-MVASGSRDGTARLWNVA 3768
>dbj|AK003477.1|AK003477 Mus musculus 18 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:1110005N04:homolog to PCAF
ASSOCIATED FACTOR 65 BETA (PUTATIVE TRANSCRIPTION
FACTOR), full insert sequence
Length = 2010
Score = 73.6 bits (179), Expect(2) = 5e-13
Identities = 55/179 (30%), Positives = 87/179 (47%)
Frame = +3
Query: 243 SVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 302
S + D+ +W S + P H A+V+C+ F+P S + LATGS DKTV LW +
Sbjct: 450 SGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQ 617
Query: 303 NLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPP 362
+ F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 618 QGN-SVRLFTGHRGPVLSLSFSP-NGKYLASAGEDQRLKLWDLAS--------------G 749
Query: 363 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAELEG 421
L GHT I+ +++P + +I S S DN +++W + N D +++EL G
Sbjct: 750 TLFKELRGHTDSITSLAFSP-DSGLIASASMDNSVRVWDIRSTCCN-TPADGSSSELVG 920
Score = 45.1 bits (105), Expect = 0.013
Identities = 32/119 (26%), Positives = 56/119 (46%), Gaps = 1/119 (0%)
Frame = +3
Query: 286 ILATGSADKTVALWDL-RNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 344
+L +GS D+T LW R L++++ H ++ V + P N LA+ TD+ + +W
Sbjct: 441 VLCSGSHDRTARLWSFDRTYPLRIYA--GHLADVDCVKFHP-NSNYLATGSTDKTVRLW- 608
Query: 345 LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
A+ G LF GH + S++PN + + S ED +++W +A
Sbjct: 609 -----------SAQQGNSVRLFT--GHRGPVLSLSFSPNGKY-LASAGEDQRLKLWDLA 743
Score = 26.2 bits (56), Expect(2) = 5e-13
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
LRGH Y + ++ G LLS S+D ++ WD+ + ++ GH+ V D
Sbjct: 262 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGS-------FTNTVLYQGHAYPVWD 417
Query: 231 V 231
V
Sbjct: 418 V 420
>dbj|AB044749.1|AB044749 Homo sapiens mRNA for WDC146, complete cds
Length = 4602
Score = 79.3 bits (194), Expect = 6e-13
Identities = 65/209 (31%), Positives = 92/209 (43%), Gaps = 1/209 (0%)
Frame = +1
Query: 193 SASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLF-GSVADDQKLM 251
+ SDD TV +WD +E I GH A V+ V WH + GS Q +
Sbjct: 814 TCSDDGTVRIWDFLRCHEE-------RILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIK 972
Query: 252 IWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 311
WD ++ + H AH V + N ++L T S D L+D+RNLK +L F
Sbjct: 973 FWDPKTGQSLATLH---AHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIRNLKEELQVF 1140
Query: 312 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 371
HK E V W P +E + AS G+D L W +G E+ E G E+ H
Sbjct: 1141RGHKKEATAVAWHPVHEGLFASGGSDGSLLFW---HVGVEK-----EVGGMEM-----AH 1281
Query: 372 TAKISDFSWNPNEPWVICSVSEDNIMQIW 400
I +W+P ++CS S D+ + W
Sbjct: 1282EGMIWSLAWHP-LGHILCSGSNDHTSKFW 1365
Score = 47.0 bits (110), Expect = 0.003
Identities = 47/255 (18%), Positives = 105/255 (40%), Gaps = 2/255 (0%)
Frame = +1
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
L+ H ++W+ N +L+A V W + ++ +F H + +
Sbjct: 628 LQAHDSPVRAMTWSHN-DMWMLTADHGGYVKYWQSN--------MNNVKMFQAHKEAIRE 780
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
++ ++ F + +DD + IWD + H A+V C+ ++P ++ ++ +G
Sbjct: 781 ASFSPT-DNKFATCSDDGTVRIWDF---LRCHEERILRGHGADVKCVDWHP-TKGLVVSG 945
Query: 291 SAD--KTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 348
S D + + WD + + L + +HK+ + +V + + +L +S D ++D+ +
Sbjct: 946 SKDSQQPIKFWDPKTGQ-SLATLHAHKNTVMEVKLNLNGNWLLTAS-RDHLCKLFDIRNL 1119
Query: 349 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYN 408
EE L + GH + + +W+P + S D + W +
Sbjct: 1120KEE-------------LQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVG----- 1245
Query: 409 DEEPDIAAAELEGQG 423
E ++ E+ +G
Sbjct: 1246-VEKEVGGMEMAHEG 1287
>gb|U49437.1|BGU49437 Biomphalaria glabrata RACK mRNA, complete cds
Length = 1235
Score = 79.0 bits (193), Expect = 8e-13
Identities = 78/296 (26%), Positives = 136/296 (45%), Gaps = 2/296 (0%)
Frame = +2
Query: 121 HEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 180
H G V + PQ P +I + + ++V+ T+ D S P L GH
Sbjct: 101 HGGWVTQIATTPQYPDMILSASRDKSLIVWRLTR-----DESSYGVPQKSLHGHGHFVSD 265
Query: 181 LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 240
+ +S+ + LS S DHT+ LWD+S G + F GH+ V VA+ + +
Sbjct: 266 VILSSDGQ-FALSGSWDHTLRLWDLSTGQTTRR-------FVGHTKDVLSVAFSADNRQI 421
Query: 241 FGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEF-ILATGSADKTVALW 299
S + D+ + +W+T K + D HT +C+ F+P ++ I+ + D+ V +W
Sbjct: 422 V-SGSRDKTIKLWNTLG--VCKYTIQDDCHTDWTSCVRFSPNTQNPIIVSSGWDRLVKVW 592
Query: 300 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 359
+L N KLK + + H + V SP + ++ AS G D + +WDL++ + + A D
Sbjct: 593 NLTNCKLKTNHY-GHTGYVNTVTVSP-DGSLCASGGKDSQAMLWDLNEGKHLYTLDGAGD 766
Query: 360 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE-EPDI 414
I+ ++PN W +C S +I +IW + + DE +P++
Sbjct: 767 --------------TINALCFSPNRYW-LCVASGPSI-KIWDLEGKVVVDELKPEV 886
>ref|NM_005647.1| Homo sapiens transducin (beta)-like 1 (TBL1), mRNA
Length = 5887
Score = 78.6 bits (192), Expect = 1e-12
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Frame = +2
Query: 174 HQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAW 233
H+ + L WN ++LSA D T +WD G +AK F HSA DV W
Sbjct: 1628 HKGPIFALKWNRK-GNYILSAGVDKTTIIWDAHTG-------EAKQQFPFHSAPALDVDW 1783
Query: 234 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 293
+ + F S + D + + + +P + HT EVN + ++P S +LA+ S D
Sbjct: 1784 Q--NNTTFASCSTDMCIHVCRLGCD---RPVKTFQGHTNEVNAIKWDP-SGMLLASCSDD 1945
Query: 294 KTVALWDLRNLKLKLHSFESHKDEIFQVHWSP--------HNETILASSGTDRRLNVWDL 345
T+ +W ++ ++ +H ++H EI+ + WSP ++ +LAS+ D + +WD+
Sbjct: 1946 MTLKIWSMKQ-EVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDI 2122
Query: 346 SK 347
+
Sbjct: 2123 ER 2128
Score = 67.4 bits (163), Expect = 2e-09
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 7/243 (2%)
Frame = +2
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEG--KIVDAKAIFTGHSAV- 227
LRGH+ E + +WN + L S S D T +W+++ G ++V I G V
Sbjct: 1328 LRGHESEVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 1504
Query: 228 ----VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYS 283
V + W+ + +L + + D IW N S ++ H + L +N
Sbjct: 1505 SNKDVTSLDWN-TNGTLLATGSYDGFARIWTEDGNLAS----TLGQHKGPIFALKWNRKG 1669
Query: 284 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 343
+IL+ G DKT +WD + K F H V W N T AS TD ++V
Sbjct: 1670 NYILSAG-VDKTTIIWDAHTGEAK-QQFPFHSAPALDVDW--QNNTTFASCSTDMCIHV- 1834
Query: 344 DLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
++G ++ + + GHT +++ W+P+ ++ S S+D ++IW M
Sbjct: 1835 --CRLGCDRPVKTFQ-----------GHTNEVNAIKWDPS-GMLLASCSDDMTLKIWSMK 1972
Query: 404 ENI 406
+ +
Sbjct: 1973 QEV 1981
>emb|Y12781.1|HSTBL1 Homo sapiens mRNA for transducin (beta) like 1 protein
Length = 5887
Score = 78.6 bits (192), Expect = 1e-12
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Frame = +2
Query: 174 HQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAW 233
H+ + L WN ++LSA D T +WD G +AK F HSA DV W
Sbjct: 1628 HKGPIFALKWNRK-GNYILSAGVDKTTIIWDAHTG-------EAKQQFPFHSAPALDVDW 1783
Query: 234 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 293
+ + F S + D + + + +P + HT EVN + ++P S +LA+ S D
Sbjct: 1784 Q--NNTTFASCSTDMCIHVCRLGCD---RPVKTFQGHTNEVNAIKWDP-SGMLLASCSDD 1945
Query: 294 KTVALWDLRNLKLKLHSFESHKDEIFQVHWSP--------HNETILASSGTDRRLNVWDL 345
T+ +W ++ ++ +H ++H EI+ + WSP ++ +LAS+ D + +WD+
Sbjct: 1946 MTLKIWSMKQ-EVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDI 2122
Query: 346 SK 347
+
Sbjct: 2123 ER 2128
Score = 67.4 bits (163), Expect = 2e-09
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 7/243 (2%)
Frame = +2
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEG--KIVDAKAIFTGHSAV- 227
LRGH+ E + +WN + L S S D T +W+++ G ++V I G V
Sbjct: 1328 LRGHESEVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 1504
Query: 228 ----VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYS 283
V + W+ + +L + + D IW N S ++ H + L +N
Sbjct: 1505 SNKDVTSLDWN-TNGTLLATGSYDGFARIWTEDGNLAS----TLGQHKGPIFALKWNRKG 1669
Query: 284 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 343
+IL+ G DKT +WD + K F H V W N T AS TD ++V
Sbjct: 1670 NYILSAG-VDKTTIIWDAHTGEAK-QQFPFHSAPALDVDW--QNNTTFASCSTDMCIHV- 1834
Query: 344 DLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
++G ++ + + GHT +++ W+P+ ++ S S+D ++IW M
Sbjct: 1835 --CRLGCDRPVKTFQ-----------GHTNEVNAIKWDPS-GMLLASCSDDMTLKIWSMK 1972
Query: 404 ENI 406
+ +
Sbjct: 1973 QEV 1981
>ref|XM_010334.6| Homo sapiens similar to transducin (beta)-like 1 (H. sapiens)
(LOC159035), mRNA
Length = 5839
Score = 78.6 bits (192), Expect = 1e-12
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Frame = +3
Query: 174 HQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAW 233
H+ + L WN ++LSA D T +WD G +AK F HSA DV W
Sbjct: 1596 HKGPIFALKWNRK-GNYILSAGVDKTTIIWDAHTG-------EAKQQFPFHSAPALDVDW 1751
Query: 234 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 293
+ + F S + D + + + +P + HT EVN + ++P S +LA+ S D
Sbjct: 1752 Q--NNTTFASCSTDMCIHVCRLGCD---RPVKTFQGHTNEVNAIKWDP-SGMLLASCSDD 1913
Query: 294 KTVALWDLRNLKLKLHSFESHKDEIFQVHWSP--------HNETILASSGTDRRLNVWDL 345
T+ +W ++ ++ +H ++H EI+ + WSP ++ +LAS+ D + +WD+
Sbjct: 1914 MTLKIWSMKQ-EVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDI 2090
Query: 346 SK 347
+
Sbjct: 2091 ER 2096
Score = 67.4 bits (163), Expect = 2e-09
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 7/243 (2%)
Frame = +3
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEG--KIVDAKAIFTGHSAV- 227
LRGH+ E + +WN + L S S D T +W+++ G ++V I G V
Sbjct: 1296 LRGHESEVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 1472
Query: 228 ----VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYS 283
V + W+ + +L + + D IW N S ++ H + L +N
Sbjct: 1473 SNKDVTSLDWN-TNGTLLATGSYDGFARIWTEDGNLAS----TLGQHKGPIFALKWNRKG 1637
Query: 284 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 343
+IL+ G DKT +WD + K F H V W N T AS TD ++V
Sbjct: 1638 NYILSAG-VDKTTIIWDAHTGEAK-QQFPFHSAPALDVDW--QNNTTFASCSTDMCIHV- 1802
Query: 344 DLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
++G ++ + + GHT +++ W+P+ ++ S S+D ++IW M
Sbjct: 1803 --CRLGCDRPVKTFQ-----------GHTNEVNAIKWDPS-GMLLASCSDDMTLKIWSMK 1940
Query: 404 ENI 406
+ +
Sbjct: 1941 QEV 1949
>emb|X61480.1|DDCORONIN D.discoideum mRNA for coronin
Length = 1430
Score = 78.6 bits (192), Expect = 1e-12
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 12/175 (6%)
Frame = +1
Query: 182 SWNSNLKGHLLSASDDHTVCLWDISAG------PKE--GKIVDAKAIFTGHSAVVEDVAW 233
+W+SN ++A+ + +WD + G P E GK +F GH + V D+A+
Sbjct: 103 AWDSNY----VAANTRYFGVIWDAAGGGSFAVIPHEASGKTTSVP-LFNGHKSAVLDIAF 267
Query: 234 HLLHESLFGSVADDQKLMIWDT----RSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 289
H +E+L GSV++D + IW +++ S P ++ H +V +SF P ++ + T
Sbjct: 268 HPFNENLVGSVSEDCNICIWGIPEGGLTDSISTPLQTLSGHKRKVGTISFGPVADNVAVT 447
Query: 290 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 344
S D V WD+ K L + E H D I W+ HN + + ++ D++ V+D
Sbjct: 448 SSGDFLVKTWDVEQGK-NLTTVEGHSDMITSCEWN-HNGSQIVTTCKDKKARVFD 606
Score = 42.4 bits (98), Expect = 0.082
Identities = 29/162 (17%), Positives = 65/162 (39%), Gaps = 6/162 (3%)
Frame = +1
Query: 254 DTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR------NLKLK 307
+ TTS P + H + V ++F+P++E ++ + S D + +W + ++
Sbjct: 196 EASGKTTSVPLFN--GHKSAVLDIAFHPFNENLVGSVSEDCNICIWGIPEGGLTDSISTP 369
Query: 308 LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI 367
L + HK ++ + + P + + +S D + WD+ + + E
Sbjct: 370 LQTLSGHKRKVGTISFGPVADNVAVTSSGDFLVKTWDVEQGKNLTTVE------------ 513
Query: 368 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYND 409
GH+ I+ WN N ++ + + +I N+
Sbjct: 514 --GHSDMITSCEWNHNGSQIVTTCKDKKARVFDPRTNSIVNE 633
>dbj|AP003592.1|AP003592 Nostoc sp. PCC 7120 DNA, complete genome, section 12/19
Length = 348250
Score = 77.8 bits (190), Expect = 2e-12
Identities = 60/232 (25%), Positives = 117/232 (49%)
Frame = +3
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
L GH + ++++ + K L S D T+ LW+++ G + + GHS V
Sbjct: 4629 LPGHSGWVWAIAFSPDGKT-LASTGADKTIKLWNLATGKEIRHL-------KGHSQGVAS 4784
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
VA+ ++L S + D+ + +W+ T K ++ H++ V ++F+P + LA+G
Sbjct: 4785 VAFSPDGKTL-ASGSLDKTIKLWNP---ATGKEIRTLQEHSSGVANVAFSPDGK-TLASG 4949
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 350
S DKT+ LW+L K+ +H+ + H D + V ++ ++T LAS D+ + +W+LS
Sbjct: 4950 SWDKTIKLWNLTTSKV-IHTLKGHSDLVMSVAFNSDSQT-LASGSKDKTIKLWNLSTGKT 5123
Query: 351 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
++ GH+ K++ ++ P + V+ S S DN +++W +
Sbjct: 5124 IRTLR--------------GHSDKVNSVAYVPRDSTVLASGSNDNTIKLWNL 5237
Score = 73.6 bits (179), Expect = 3e-11
Identities = 53/176 (30%), Positives = 96/176 (54%)
Frame = +3
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
L+GH + ++++ + K L S S D T+ LW+ + G + + + HS+ V +
Sbjct: 4755 LKGHSQGVASVAFSPDGKT-LASGSLDKTIKLWNPATGKEIRTLQE-------HSSGVAN 4910
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
VA+ ++L S + D+ + +W+ TTSK H++ H+ V ++FN S+ LA+G
Sbjct: 4911 VAFSPDGKTL-ASGSWDKTIKLWNL---TTSKVIHTLKGHSDLVMSVAFNSDSQ-TLASG 5075
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 346
S DKT+ LW+L K + + H D++ V + P + T+LAS D + +W+L+
Sbjct: 5076 SKDKTIKLWNLSTGKT-IRTLRGHSDKVNSVAYVPRDSTVLASGSNDNTIKLWNLT 5240
Score = 72.4 bits (176), Expect = 7e-11
Identities = 41/133 (30%), Positives = 72/133 (53%), Gaps = 5/133 (3%)
Frame = +3
Query: 255 TRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH 314
T+ + S +++ H ++VN ++F+P EF LA+GS DKT+ +W+L+N K K+H+ H
Sbjct: 4467 TKFSEISTQPYTLKGHASDVNSVAFSPNGEF-LASGSDDKTIKVWNLKN-KQKIHTLPGH 4640
Query: 315 KDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAK 374
++ + +SP +T LAS+G D+ + +W+L+ E + + G + F G T
Sbjct: 4641 SGWVWAIAFSPDGKT-LASTGADKTIKLWNLATGKEIRHLKGHSQGVASVAFSPDGKTLA 4817
Query: 375 ISDFS-----WNP 382
WNP
Sbjct: 4818 SGSLDKTIKLWNP 4856
Score = 65.5 bits (158), Expect = 9e-09
Identities = 44/161 (27%), Positives = 84/161 (51%), Gaps = 5/161 (3%)
Frame = -1
Query: 191 LLSASDDHTVCLWDISAGPKEGKIVDAKAIFT--GHSAVVEDVAWHLLHESLFGSVADDQ 248
L +ASDD T+ LW + + +FT GH+ V+ V++ + + S + D+
Sbjct: 65101 LATASDDKTIKLWHLPT---------SSEVFTLNGHTNPVKSVSFS-PNGQILASGSWDK 64952
Query: 249 KLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK- 307
++ +WD TT K +++ AH +V+ ++F+P E ILA+ S D+T+ LW + +
Sbjct: 64951 QVKLWDV---TTGKEIYALKAHQLQVSAVAFSPQGE-ILASASFDRTIRLWQITQNHPRY 64784
Query: 308 --LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 346
+ + H + + +SP + ILA+ D + +WD++
Sbjct: 64783 TLIKTLSGHTRAVLAIAFSPDGK-ILATGSDDNTIKLWDIN 64664
Score = 65.1 bits (157), Expect = 1e-08
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 2/234 (0%)
Frame = -1
Query: 171 LRGHQKEGYGLSWNSNLKGHLL-SASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVE 229
L GH +S++ N G +L S S D V LWD++ G + I KA H V
Sbjct: 65032 LNGHTNPVKSVSFSPN--GQILASGSWDKQVKLWDVTTGKE---IYALKA----HQLQVS 64880
Query: 230 DVAWHLLHESLFGSVADDQKLMIWD-TRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILA 288
VA+ E L S + D+ + +W T+++ ++ HT V ++F+P + ILA
Sbjct: 64879 AVAFSPQGEIL-ASASFDRTIRLWQITQNHPRYTLIKTLSGHTRAVLAIAFSPDGK-ILA 64706
Query: 289 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 348
TGS D T+ LWD+ +L + + H + V ++ N+T++++S D+ + +W +S
Sbjct: 64705 TGSDDNTIKLWDINTGQL-IATLLGHSWSVVAVTFTADNKTLISAS-WDKTIKLWKVSTT 64532
Query: 349 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
E + H + + NP VI S S D +++WQ+
Sbjct: 64531 EE--------------IVTLASHLDSVCAVAVNP-VTQVIASSSRDKTIKLWQL 64415
Score = 64.7 bits (156), Expect = 2e-08
Identities = 46/163 (28%), Positives = 82/163 (50%)
Frame = -1
Query: 243 SVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 302
S DD+ + +W+ T K H+ V +SF+P E ILAT S DKT+ LW L
Sbjct: 65221 SGGDDKIIRLWELN---TQKLLACFSGHSQAVTSVSFSPQGE-ILATASDDKTIKLWHLP 65054
Query: 303 NLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPP 362
++ + H + + V +SP N ILAS D+++ +WD++ G+E
Sbjct: 65053 T-SSEVFTLNGHTNPVKSVSFSP-NGQILASGSWDKQVKLWDVT-TGKE----------- 64916
Query: 363 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 405
++ H ++S +++P + ++ S S D +++WQ+ +N
Sbjct: 64915 --IYALKAHQLQVSAVAFSP-QGEILASASFDRTIRLWQITQN 64796
>dbj|AP003588.1|AP003588 Nostoc sp. PCC 7120 DNA, complete genome, section 8/19
Length = 334520
Score = 77.8 bits (190), Expect = 2e-12
Identities = 68/227 (29%), Positives = 117/227 (50%), Gaps = 3/227 (1%)
Frame = -3
Query: 179 YGLSWNSNLKGHLL-SASDDHTVCLWDISAGPKEGKIVDAKAIFT--GHSAVVEDVAWHL 235
YG+S+ +G L+ SA+ D TV +W ++ D KA+ T GH V V +
Sbjct: 131166 YGISFTP--QGDLIASANADKTVKIW---------RVRDGKALKTLIGHDNEVNKVNFSP 131020
Query: 236 LHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 295
++L S + D + +W+ K ++ HT EV +SF+P + I+A+ SADKT
Sbjct: 131019 DGKTL-ASASRDNTVKLWNVSDGKFKK---TLKGHTDEVFWVSFSPDGK-IIASASADKT 130855
Query: 296 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 355
+ LWD + L + S +H D ++ V+++P + ++LAS+ D+ + +W
Sbjct: 130854 IRLWDSFSGNL-IKSLPAHNDLVYSVNFNP-DGSMLASTSADKTVKLW------------ 130717
Query: 356 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
+ DG LL GH+ + S++P+ + I S SED ++IWQ+
Sbjct: 130716 RSHDG--HLLHTFSGHSNVVYSSSFSPDGRY-IASASEDKTVKIWQI 130585
Score = 75.9 bits (185), Expect = 7e-12
Identities = 62/231 (26%), Positives = 115/231 (48%)
Frame = -3
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
+ GH++ + ++ + K +L SAS DH++ LWD ++G TGHSA V
Sbjct: 131937 ITGHEQTVNNVYFSPDGK-NLASASSDHSIKLWDTTSG-------QLLMTLTGHSAGVIT 131782
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
V + +++ + ++D+ + +W + K +++ H VN LSF+P + LA+
Sbjct: 131781 VRFSPDGQTI-AAGSEDKTVKLWHRQDGKLLK---TLNGHQDWVNSLSFSPDGK-TLASA 131617
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 350
SADKT+ LW + + KL + + + H D ++ V++S + I AS+ D + +W+ I
Sbjct: 131616 SADKTIKLWRIADGKL-VKTLKGHNDSVWDVNFSSDGKAI-ASASRDNTIKLWNRHGIEL 131443
Query: 351 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 401
E GH+ + ++ P+ +I S S DN +++WQ
Sbjct: 131442 ETFT---------------GHSGGVYAVNFLPDSN-IIASASLDNTIRLWQ 131338
Score = 50.1 bits (118), Expect = 4e-04
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 28/142 (19%)
Frame = -3
Query: 287 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 346
+A+GS DKT+ LW R+ +L + H+D ++ V +SP +TI AS G+D+ + +W S
Sbjct: 132129 IASGSLDKTIKLWS-RDGRL-FRTLNGHEDAVYSVSFSPDGQTI-ASGGSDKTIKLWQTS 131959
Query: 347 K-------IGEEQSAEDAEDGPP---------------------ELLFIHGGHTAKISDF 378
G EQ+ + P +LL GH+A +
Sbjct: 131958 DGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITV 131779
Query: 379 SWNPNEPWVICSVSEDNIMQIW 400
++P + I + SED +++W
Sbjct: 131778 RFSP-DGQTIAAGSEDKTVKLW 131716
>gb|AF025330.1|AF025330 Danio rerio receptor for activated protein kinase C (RACK1) mRNA,
complete cds
Length = 1069
Score = 77.8 bits (190), Expect = 2e-12
Identities = 79/291 (27%), Positives = 134/291 (45%), Gaps = 1/291 (0%)
Frame = +1
Query: 121 HEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 180
H G V + PQ P +I + + ++++ T+ D + P LRGH
Sbjct: 97 HSGWVTQIATTPQFPDMILSASRDKTIIMWKLTR-----DETNYGIPQRALRGHSHFVSD 261
Query: 181 LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 240
+ +S+ + LS S D T+ LWD++ G + F GH+ V VA+ + +
Sbjct: 262 VVISSDGQ-FALSGSWDGTLRLWDLTTGTTTRR-------FVGHTKDVLSVAFSADNRQI 417
Query: 241 FGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEF-ILATGSADKTVALW 299
S + D+ + +W+T K + D+HT V+C+ F+P S I+ + DK V +W
Sbjct: 418 V-SGSRDKTIKLWNTLG--VCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVW 588
Query: 300 DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 359
+L N KLK + H + V SP + ++ AS G D + +WDL++
Sbjct: 589 NLANCKLKTNHI-GHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNE------------ 726
Query: 360 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 410
L + GG T I+ ++PN W +C+ + +I +IW + I DE
Sbjct: 727 -GKHLYTLDGGDT--INALCFSPNRYW-LCAATGPSI-KIWDLEGKIIVDE 864
>ref|NM_064584.1| six WD40 repeats
Length = 2430
Score = 77.8 bits (190), Expect = 2e-12
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 1/223 (0%)
Frame = +1
Query: 193 SASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLF-GSVADDQKLM 251
+ASDD T +WD + +E + GH A V + WH + GS Q +
Sbjct: 700 TASDDGTARVWDFARYTEE-------RVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVK 858
Query: 252 IWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 311
IWD +S + ++ H + V + FN ++L TG D V ++D+R +K ++ ++
Sbjct: 859 IWDPKSGSCLA---TLQEHKSSVMAVEFNKNGNWLL-TGGRDHLVKMYDIRMMK-EMRTY 1023
Query: 312 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 371
+HK E+ + W P +E + S G D + W + DG E+ + H
Sbjct: 1024RAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMV-------------DGEKEIGLLEHAH 1164
Query: 372 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDI 414
I W+P ++ + S DN + W A N D DI
Sbjct: 1165DQAIWSMKWHP-LGHILATGSNDNNTKFW--ARNRPGDTVEDI 1284
>ref|XM_092154.1| Homo sapiens similar to F-box protein FBW7, isoform 2; hypothetical
protein FLJ11071; archipelago, Drosophila, homolog of;
F-box protein FBW7; F-box protein SEL-10; homolog of C
elegans sel-10 (LOC164781), mRNA
Length = 1341
Score = 77.8 bits (190), Expect = 2e-12
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 3/212 (1%)
Frame = +1
Query: 192 LSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 251
++ S D T LWD ++G + + GH VV +A++ + + + D+
Sbjct: 73 ITGSYDRTCKLWDTASGEELNTL-------EGHRNVVYAIAFNNPYGDKIATGSFDKTCK 231
Query: 252 IWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 311
+W T K H+ HTAE+ CLSFNP S ++ATGS D T LWD++N + ++++
Sbjct: 232 LWSVE---TGKCYHTFRGHTAEIVCLSFNPQST-LVATGSMDTTAKLWDIQNGE-EVYTL 396
Query: 312 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 371
H EI + ++ + I+ S D + VW DA+ G + I GH
Sbjct: 397 RGHSAEIISLSFNTSGDRIITGS-FDHTVVVW------------DADTGRKVNILI--GH 531
Query: 372 TAKISDFSWNPNEPW---VICSVSEDNIMQIW 400
A+IS S+N W +I + S D ++W
Sbjct: 532 CAEISSASFN----WDCSLILTGSMDKTCKLW 615
Score = 59.7 bits (143), Expect = 5e-07
Identities = 52/184 (28%), Positives = 76/184 (41%), Gaps = 35/184 (19%)
Frame = +1
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEG------------------ 212
LRGH E LS+N++ +++ S DHTV +WD G K
Sbjct: 394 LRGHSAEIISLSFNTS-GDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDC 570
Query: 213 ------------KIVDAK-----AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDT 255
K+ DA A TGH + D + + + + AD +
Sbjct: 571 SLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIF--- 741
Query: 256 RSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK 315
S T K ++ H E++ +SFNP +L TGS+DKT +WD + + L E H
Sbjct: 742 -SAATRKCIAKLEGHEGEISKISFNPQGNHLL-TGSSDKTARIWDAQTGQC-LQVLEGHT 912
Query: 316 DEIF 319
DEIF
Sbjct: 913 DEIF 924
Score = 59.3 bits (142), Expect = 7e-07
Identities = 74/272 (27%), Positives = 113/272 (41%), Gaps = 7/272 (2%)
Frame = +1
Query: 136 YIIATKTPSADVLV---FDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLL 192
Y IA P D + FD T + +G+C R GH E LS+N +
Sbjct: 163 YAIAFNNPYGDKIATGSFDKTCKLWSVE-TGKCYHTFR--GHTAEIVCLSFNPQ-STLVA 330
Query: 193 SASDDHTVCLWDISAGPKEGKIVDAKAIFT--GHSAVVEDVAWHLLHESLFGSVADDQKL 250
+ S D T LWDI G + ++T GHSA + ++++ + + + D +
Sbjct: 331 TGSMDTTAKLWDIQNGEE---------VYTLRGHSAEIISLSFNTSGDRIITG-SFDHTV 480
Query: 251 MIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 310
++WD T + + + H AE++ SFN IL TGS DKT LWD N K + +
Sbjct: 481 VVWDA---DTGRKVNILIGHCAEISSASFNWDCSLIL-TGSMDKTCKLWDATNGKC-VAT 645
Query: 311 FESHKDEIFQVHWSPHNETILASS--GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIH 368
H DEI + + I +S GT R + I + +
Sbjct: 646 LTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLE---------------- 777
Query: 369 GGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 400
GH +IS S+NP ++ S D +IW
Sbjct: 778 -GHEGEISKISFNPQGNHLLTG-SSDKTARIW 867
Score = 55.8 bits (133), Expect = 7e-06
Identities = 45/174 (25%), Positives = 81/174 (45%)
Frame = +1
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
L GH+ Y +++N+ + + S D T LW + G F GH+A +
Sbjct: 139 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETG-------KCYHTFRGHTAEIVC 297
Query: 231 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 290
++++ +L + + D +WD ++ + +++ H+AE+ LSFN + I+ TG
Sbjct: 298 LSFN-PQSTLVATGSMDTTAKLWDIQN---GEEVYTLRGHSAEIISLSFNTSGDRII-TG 462
Query: 291 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 344
S D TV +WD + K++ H EI ++ IL S D+ +WD
Sbjct: 463 SFDHTVVVWD-ADTGRKVNILIGHCAEISSASFNWDCSLILTGS-MDKTCKLWD 618
>ref|NM_119703.1| putative protein
Length = 1245
Score = 77.4 bits (189), Expect = 2e-12
Identities = 55/171 (32%), Positives = 88/171 (51%)
Frame = +1
Query: 133 QNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLL 192
+N I+A+ + V V+D +G+C + + H+K+ + ++WN+ LL
Sbjct: 673 ENRNIVASGSEDKKVKVWDVA--------TGKCK--VTMEHHEKKVHAVAWNNYTPEVLL 822
Query: 193 SASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 252
S S D TV L K+G+ + A VE +AW E F D +
Sbjct: 823 SGSRDRTVVL-------KDGRDPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKG 981
Query: 253 WDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 303
+DTR++ S PS + AH +EV+ +S+N ++ +LATGSAD++V LWDL N
Sbjct: 982 FDTRASDLS-PSFIIHAHDSEVSSISYNIHAPNLLATGSADESVKLWDLSN 1131
Score = 50.8 bits (120), Expect = 2e-04
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 33/162 (20%)
Frame = +1
Query: 277 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGT 336
L+FN + I+A+GS DK V +WD+ K K+ + E H+ ++ V W+ + +L S
Sbjct: 658 LTFNWENRNIVASGSEDKKVKVWDVATGKCKV-TMEHHEKKVHAVAWNNYTPEVLLSGSR 834
Query: 337 DRRLNVWD----------------LSKIGEEQSAED-----------------AEDGPPE 363
DR + + D + K+ + +E A D P
Sbjct: 835 DRTVVLKDGRDPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPS 1014
Query: 364 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 405
FI H +++S S+N + P ++ + S D +++W ++ N
Sbjct: 1015--FIIHAHDSEVSSISYNIHAPNLLATGSADESVKLWDLSNN 1134
>ref|NM_101904.1| hypothetical protein
Length = 1140
Score = 77.0 bits (188), Expect = 3e-12
Identities = 55/219 (25%), Positives = 92/219 (41%), Gaps = 5/219 (2%)
Frame = +1
Query: 181 LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 240
L W S L+S D+ + LW + K +++ + HS + AW H+
Sbjct: 463 LWWPSGRCDKLISI-DEQNIFLWSLDCSKKSAEVLSKDSAGMLHS--LSGGAWDP-HDVN 630
Query: 241 FGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 300
+ + + WD R T K +S++ A V + +NP E IL T + + +WD
Sbjct: 631 AVAATGESSVQFWDLR---TMKKVNSIEH--AHVRGVDYNPKREHILVTAEDESGIHVWD 795
Query: 301 LRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG-----EEQSAE 355
LR K+ + H + V +P + ++ S+GTD +N+W S E E
Sbjct: 796 LRKAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLWYASATSSDDKTSESPVE 975
Query: 356 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 394
LL + + + +W+ EPWV S+S D
Sbjct: 976 STRQRVNPLLNSYTDYEDSVYGLAWSSREPWVFASLSYD 1092
Score = 44.3 bits (103), Expect = 0.022
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 4/169 (2%)
Frame = +1
Query: 246 DDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLS---FNPYS-EFILATGSADKTVALWDL 301
D+Q + +W + S S D+ ++ LS ++P+ + ATG + +V WDL
Sbjct: 505 DEQNIFLWSLDCSKKSAEVLSKDS-AGMLHSLSGGAWDPHDVNAVAATG--ESSVQFWDL 675
Query: 302 RNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGP 361
R +K K++S E + V ++P E IL ++ + ++VWDL K A+
Sbjct: 676 RTMK-KVNSIEHA--HVRGVDYNPKREHILVTAEDESGIHVWDLRK---------AKVPV 819
Query: 362 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 410
EL GHT NP +I S D+++ +W + +D+
Sbjct: 820 QEL----PGHTHWTWAVRCNPEYDGLILSAGTDSVVNLWYASATSSDDK 954
Score = 40.4 bits (93), Expect = 0.31
Identities = 28/143 (19%), Positives = 56/143 (38%), Gaps = 6/143 (4%)
Frame = +1
Query: 266 SVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVH--- 322
S+DAH ++NC+ + P ++ + LW L K KD +H
Sbjct: 427 SLDAHVGKINCVLWWPSGRCDKLISIDEQNIFLWSLDCSKKSAEVLS--KDSAGMLHSLS 600
Query: 323 ---WSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFS 379
W PH+ +A++G + + WDL + + S E A +
Sbjct: 601 GGAWDPHDVNAVAATG-ESSVQFWDLRTMKKVNSIEHAH----------------VRGVD 729
Query: 380 WNPNEPWVICSVSEDNIMQIWQM 402
+NP ++ + +++ + +W +
Sbjct: 730 YNPKREHILVTAEDESGIHVWDL 798
Score = 35.8 bits (81), Expect = 7.7
Identities = 35/154 (22%), Positives = 58/154 (36%), Gaps = 14/154 (9%)
Frame = +1
Query: 113 IETEIKIN--HEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLR 170
+ T K+N V Y P+ +I+ T + + V+D K P
Sbjct: 673 LRTMKKVNSIEHAHVRGVDYNPKREHILVTAEDESGIHVWDLRKAKV---------PVQE 825
Query: 171 LRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKA----------- 219
L GH + + N G +LSA D V LW SA + K ++
Sbjct: 826 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLWYASATSSDDKTSESPVESTRQRVNPLL 1005
Query: 220 -IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 252
+T + V +AW +F S++ D +++I
Sbjct: 1006NSYTDYEDSVYGLAWSSREPWVFASLSYDGRVII 1107
>gb|AF151110.1|AF151110 Mus musculus COP1 protein (Cop1) mRNA, partial cds
Length = 2411
Score = 76.3 bits (186), Expect = 5e-12
Identities = 51/167 (30%), Positives = 82/167 (48%)
Frame = +2
Query: 181 LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 240
+SW+S K L S+ + TV LWD G + ++ H V ++L+ L
Sbjct: 1214 ISWSSYHKNLLASSDYEGTVILWDGFTGQRS-------KVYQEHEKRCWSVDFNLMDPKL 1372
Query: 241 FGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 300
S +DD K+ +W T + + S++A A V C+ F+P S + LA G AD V +D
Sbjct: 1373 LASGSDDAKVKLWSTNLDNSVA---SIEAK-ANVCCVKFSPSSRYHLAFGCADHCVHYYD 1540
Query: 301 LRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
LRN K + F+ H+ + + E + AS TD +L +W++ K
Sbjct: 1541 LRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSAS--TDSQLKLWNVGK 1675
Score = 38.1 bits (87), Expect = 1.6
Identities = 18/73 (24%), Positives = 42/73 (56%), Gaps = 1/73 (1%)
Frame = +2
Query: 272 AEVNCLSFNPYSEFILATGSADKTVALWD-LRNLKLKLHSFESHKDEIFQVHWSPHNETI 330
++++C+S++ Y + +LA+ + TV LWD + K+ ++ H+ + V ++ + +
Sbjct: 1199 SKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKV--YQEHEKRCWSVDFNLMDPKL 1372
Query: 331 LASSGTDRRLNVW 343
LAS D ++ +W
Sbjct: 1373 LASGSDDAKVKLW 1411
>ref|NM_057921.1| Drosophila melanogaster Receptor of activated protein kinase C 1
(Rack1), transcript variant Rack1-P1|CDS, mRNA
Length = 957
Score = 76.3 bits (186), Expect = 5e-12
Identities = 76/288 (26%), Positives = 131/288 (45%), Gaps = 3/288 (1%)
Frame = +1
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQK-- 176
I H G V + P++P I + + ++V+ T+ + + P RL GH
Sbjct: 34 IGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRD----EDTNYGYPQKRLYGHSHFI 201
Query: 177 EGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLL 236
LS + N + LS S D T+ LWD++AG + F GH+ V VA+
Sbjct: 202 SDVVLSSDGN---YALSGSWDQTLRLWDLAAGKTTRR-------FEGHTKDVLSVAFSAD 351
Query: 237 HESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNP-YSEFILATGSADKT 295
+ + S + D+ + +W+T + K + D HT V+C+ F+P +S I+ + D+T
Sbjct: 352 NRQIV-SGSRDKTIKLWNTLAEC--KFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRT 522
Query: 296 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 355
V +W+L N KLK ++ H + V SP + ++ S G D + +WDL+ + E
Sbjct: 523 VKVWNLANCKLK-NNHHGHNGYLNTVTVSP-DGSLCTSGGKDSKALLWDLNDGKNLYTLE 696
Query: 356 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
H I+ ++PN W+ V+ ++IW +A
Sbjct: 697 ---------------HNDIINALCFSPNRYWL--CVAYGPSIKIWDLA 789
>ref|XM_040554.4| Homo sapiens similar to similar to constitutive photomorphogenic
protein 1 (Arabidopsis) (H. sapiens) (LOC148588), mRNA
Length = 859
Score = 76.3 bits (186), Expect = 5e-12
Identities = 51/167 (30%), Positives = 82/167 (48%)
Frame = +2
Query: 181 LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 240
+SW+S K L S+ + TV LWD G + ++ H V ++L+ L
Sbjct: 149 ISWSSYHKNLLASSDYEGTVILWDGFTGQRS-------KVYQEHEKRCWSVDFNLMDPKL 307
Query: 241 FGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 300
S +DD K+ +W T + + S++A A V C+ F+P S + LA G AD V +D
Sbjct: 308 LASGSDDAKVKLWSTNLDNSVA---SIEAK-ANVCCVKFSPSSRYHLAFGCADHCVHYYD 475
Query: 301 LRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
LRN K + F+ H+ + + E + AS TD +L +W++ K
Sbjct: 476 LRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSAS--TDSQLKLWNVGK 610
Score = 38.1 bits (87), Expect = 1.6
Identities = 18/73 (24%), Positives = 42/73 (56%), Gaps = 1/73 (1%)
Frame = +2
Query: 272 AEVNCLSFNPYSEFILATGSADKTVALWD-LRNLKLKLHSFESHKDEIFQVHWSPHNETI 330
++++C+S++ Y + +LA+ + TV LWD + K+ ++ H+ + V ++ + +
Sbjct: 134 SKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKV--YQEHEKRCWSVDFNLMDPKL 307
Query: 331 LASSGTDRRLNVW 343
LAS D ++ +W
Sbjct: 308 LASGSDDAKVKLW 346
>dbj|AK001278.1|AK001278 Homo sapiens cDNA FLJ10416 fis, clone NT2RP1000111, moderately
similar to COP1 REGULATORY PROTEIN
Length = 2021
Score = 76.3 bits (186), Expect = 5e-12
Identities = 51/167 (30%), Positives = 82/167 (48%)
Frame = +3
Query: 181 LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 240
+SW+S K L S+ + TV LWD G + ++ H V ++L+ L
Sbjct: 930 ISWSSYHKNLLASSDYEGTVILWDGFTGQRS-------KVYQEHEKRCWSVDFNLMDPKL 1088
Query: 241 FGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 300
S +DD K+ +W T + + S++A A V C+ F+P S + LA G AD V +D
Sbjct: 1089 LASGSDDAKVKLWSTNLDNSVA---SIEAK-ANVCCVKFSPSSRYHLAFGCADHCVHYYD 1256
Query: 301 LRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
LRN K + F+ H+ + + E + AS TD +L +W++ K
Sbjct: 1257 LRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSAS--TDSQLKLWNVGK 1391
Score = 38.1 bits (87), Expect = 1.6
Identities = 18/73 (24%), Positives = 42/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 272 AEVNCLSFNPYSEFILATGSADKTVALWD-LRNLKLKLHSFESHKDEIFQVHWSPHNETI 330
++++C+S++ Y + +LA+ + TV LWD + K+ ++ H+ + V ++ + +
Sbjct: 915 SKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKV--YQEHEKRCWSVDFNLMDPKL 1088
Query: 331 LASSGTDRRLNVW 343
LAS D ++ +W
Sbjct: 1089LASGSDDAKVKLW 1127
>gb|AY071661.1| Drosophila melanogaster RE74715 full length cDNA
Length = 1155
Score = 76.3 bits (186), Expect = 5e-12
Identities = 76/288 (26%), Positives = 131/288 (45%), Gaps = 3/288 (1%)
Frame = +3
Query: 119 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQK-- 176
I H G V + P++P I + + ++V+ T+ + + P RL GH
Sbjct: 144 IGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRD----EDTNYGYPQKRLYGHSHFI 311
Query: 177 EGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLL 236
LS + N + LS S D T+ LWD++AG + F GH+ V VA+
Sbjct: 312 SDVVLSSDGN---YALSGSWDQTLRLWDLAAGKTTRR-------FEGHTKDVLSVAFSAD 461
Query: 237 HESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNP-YSEFILATGSADKT 295
+ + S + D+ + +W+T + K + D HT V+C+ F+P +S I+ + D+T
Sbjct: 462 NRQIV-SGSRDKTIKLWNTLAEC--KFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRT 632
Query: 296 VALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 355
V +W+L N KLK ++ H + V SP + ++ S G D + +WDL+ + E
Sbjct: 633 VKVWNLANCKLK-NNHHGHNGYLNTVTVSP-DGSLCTSGGKDSKALLWDLNDGKNLYTLE 806
Query: 356 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
H I+ ++PN W+ V+ ++IW +A
Sbjct: 807 ---------------HNDIINALCFSPNRYWL--CVAYGPSIKIWDLA 899
>ref|NM_022457.3| Homo sapiens similar to constitutive photomorphogenic protein 1
(Arabidopsis) (FLJ10416), mRNA
Length = 2009
Score = 76.3 bits (186), Expect = 5e-12
Identities = 51/167 (30%), Positives = 82/167 (48%)
Frame = +2
Query: 181 LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 240
+SW+S K L S+ + TV LWD G + ++ H V ++L+ L
Sbjct: 896 ISWSSYHKNLLASSDYEGTVILWDGFTGQRS-------KVYQEHEKRCWSVDFNLMDPKL 1054
Query: 241 FGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 300
S +DD K+ +W T + + S++A A V C+ F+P S + LA G AD V +D
Sbjct: 1055 LASGSDDAKVKLWSTNLDNSVA---SIEAK-ANVCCVKFSPSSRYHLAFGCADHCVHYYD 1222
Query: 301 LRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
LRN K + F+ H+ + + E + AS TD +L +W++ K
Sbjct: 1223 LRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSAS--TDSQLKLWNVGK 1357
Score = 38.1 bits (87), Expect = 1.6
Identities = 18/73 (24%), Positives = 42/73 (56%), Gaps = 1/73 (1%)
Frame = +2
Query: 272 AEVNCLSFNPYSEFILATGSADKTVALWD-LRNLKLKLHSFESHKDEIFQVHWSPHNETI 330
++++C+S++ Y + +LA+ + TV LWD + K+ ++ H+ + V ++ + +
Sbjct: 881 SKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKV--YQEHEKRCWSVDFNLMDPKL 1054
Query: 331 LASSGTDRRLNVW 343
LAS D ++ +W
Sbjct: 1055LASGSDDAKVKLW 1093
>dbj|AK025789.1|AK025789 Homo sapiens cDNA: FLJ22136 fis, clone HEP20890
Length = 2009
Score = 76.3 bits (186), Expect = 5e-12
Identities = 51/167 (30%), Positives = 82/167 (48%)
Frame = +2
Query: 181 LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 240
+SW+S K L S+ + TV LWD G + ++ H V ++L+ L
Sbjct: 896 ISWSSYHKNLLASSDYEGTVILWDGFTGQRS-------KVYQEHEKRCWSVDFNLMDPKL 1054
Query: 241 FGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 300
S +DD K+ +W T + + S++A A V C+ F+P S + LA G AD V +D
Sbjct: 1055 LASGSDDAKVKLWSTNLDNSVA---SIEAK-ANVCCVKFSPSSRYHLAFGCADHCVHYYD 1222
Query: 301 LRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
LRN K + F+ H+ + + E + AS TD +L +W++ K
Sbjct: 1223 LRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSAS--TDSQLKLWNVGK 1357
Score = 38.1 bits (87), Expect = 1.6
Identities = 18/73 (24%), Positives = 42/73 (56%), Gaps = 1/73 (1%)
Frame = +2
Query: 272 AEVNCLSFNPYSEFILATGSADKTVALWD-LRNLKLKLHSFESHKDEIFQVHWSPHNETI 330
++++C+S++ Y + +LA+ + TV LWD + K+ ++ H+ + V ++ + +
Sbjct: 881 SKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKV--YQEHEKRCWSVDFNLMDPKL 1054
Query: 331 LASSGTDRRLNVW 343
LAS D ++ +W
Sbjct: 1055LASGSDDAKVKLW 1093
>ref|XM_059513.2| Homo sapiens similar to constitutive photomorphogenic protein 1
(Arabidopsis) (FLJ10416), mRNA
Length = 1429
Score = 76.3 bits (186), Expect = 5e-12
Identities = 51/167 (30%), Positives = 82/167 (48%)
Frame = +1
Query: 181 LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 240
+SW+S K L S+ + TV LWD G + ++ H V ++L+ L
Sbjct: 535 ISWSSYHKNLLASSDYEGTVILWDGFTGQRS-------KVYQEHEKRCWSVDFNLMDPKL 693
Query: 241 FGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 300
S +DD K+ +W T + + S++A A V C+ F+P S + LA G AD V +D
Sbjct: 694 LASGSDDAKVKLWSTNLDNSVA---SIEAK-ANVCCVKFSPSSRYHLAFGCADHCVHYYD 861
Query: 301 LRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
LRN K + F+ H+ + + E + AS TD +L +W++ K
Sbjct: 862 LRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSAS--TDSQLKLWNVGK 996
Score = 38.1 bits (87), Expect = 1.6
Identities = 18/73 (24%), Positives = 42/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 272 AEVNCLSFNPYSEFILATGSADKTVALWD-LRNLKLKLHSFESHKDEIFQVHWSPHNETI 330
++++C+S++ Y + +LA+ + TV LWD + K+ ++ H+ + V ++ + +
Sbjct: 520 SKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKV--YQEHEKRCWSVDFNLMDPKL 693
Query: 331 LASSGTDRRLNVW 343
LAS D ++ +W
Sbjct: 694 LASGSDDAKVKLW 732
>ref|NG_000668.1| Drosophila melanogaster ebi (ebi) on chromosome 2
Length = 13455
Score = 75.9 bits (185), Expect = 7e-12
Identities = 53/182 (29%), Positives = 82/182 (44%), Gaps = 8/182 (4%)
Frame = +2
Query: 174 HQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAW 233
H+ + L WN ++LSA D T +WD S G F HSA DV W
Sbjct: 6809 HKGPIFALKWNK-CGNYILSAGVDKTTIIWDASTG-------QCTQQFAFHSAPALDVDW 6964
Query: 234 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 293
F S + DQ++ + N +P + HT EVN + + P + +LA+ S D
Sbjct: 6965 QT--NQAFASCSTDQRIHVCRLGVN---EPIKTFKGHTNEVNAIKWCPQGQ-LLASCSDD 7126
Query: 294 KTVALWDLRNLKLKLHSFESHKDEIFQVHWS--------PHNETILASSGTDRRLNVWDL 345
T+ +W + N H ++H EI+ + WS P+ ILAS+ D + +WD+
Sbjct: 7127 MTLKIWSM-NRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDV 7303
Query: 346 SK 347
+
Sbjct: 7304 ER 7309
Score = 63.9 bits (154), Expect = 3e-08
Identities = 82/355 (23%), Positives = 130/355 (36%), Gaps = 35/355 (9%)
Frame = +2
Query: 83 VQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMPQNPYIIATK- 141
V N D + + G G+VT ++ + G N P +T
Sbjct: 6176 VSTSNPDAAASGGASTATGSKAPSGAVTIRVGAQGNNVQSGSSNAQSSAPSGTISSSTSG 6355
Query: 142 ---TPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDH 198
TP+A ++ D ++ P+ LRGH+ E + +WN + + L S S D
Sbjct: 6356 GAGTPAA-LVPMDIDENIEIPESKARV-----LRGHESEVFICAWNPS-RDLLASGSGDS 6514
Query: 199 TVCLWDIS-AGPKEGKIVDAKAIFTGHSAV------------VEDVAWHL---------- 235
T +WD+S A ++V I G + V V +WHL
Sbjct: 6515 TARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNVSRRSWHLSLAKFDF*SL 6694
Query: 236 --------LHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFIL 287
SL + + D IW T S ++ H + L +N +IL
Sbjct: 6695 LNLFSFLQCDGSLLATGSYDGYARIWKTDGRLAS----TLGQHKGPIFALKWNKCGNYIL 6862
Query: 288 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
+ G DKT +WD + F H V W + AS TD+R++V L
Sbjct: 6863 SAG-VDKTTIIWDASTGQC-TQQFAFHSAPALDVDWQTNQ--AFASCSTDQRIHVCRL-- 7024
Query: 348 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
G E + GHT +++ W P + ++ S S+D ++IW M
Sbjct: 7025 ------------GVNEPIKTFKGHTNEVNAIKWCP-QGQLLASCSDDMTLKIWSM 7150
>gb|AC005762.1|AC005762 Drosophila melanogaster DNA sequence (P1s DS00679 (D272) and DS05054
(D135)), complete sequence
Length = 81053
Score = 75.9 bits (185), Expect = 7e-12
Identities = 53/182 (29%), Positives = 82/182 (44%), Gaps = 8/182 (4%)
Frame = +3
Query: 174 HQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAW 233
H+ + L WN ++LSA D T +WD S G F HSA DV W
Sbjct: 56265 HKGPIFALKWNK-CGNYILSAGVDKTTIIWDASTG-------QCTQQFAFHSAPALDVDW 56420
Query: 234 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 293
F S + DQ++ + N +P + HT EVN + + P + +LA+ S D
Sbjct: 56421 QT--NQAFASCSTDQRIHVCRLGVN---EPIKTFKGHTNEVNAIKWCPQGQ-LLASCSDD 56582
Query: 294 KTVALWDLRNLKLKLHSFESHKDEIFQVHWS--------PHNETILASSGTDRRLNVWDL 345
T+ +W + N H ++H EI+ + WS P+ ILAS+ D + +WD+
Sbjct: 56583 MTLKIWSM-NRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDV 56759
Query: 346 SK 347
+
Sbjct: 56760 ER 56765
Score = 63.9 bits (154), Expect = 3e-08
Identities = 82/355 (23%), Positives = 130/355 (36%), Gaps = 35/355 (9%)
Frame = +3
Query: 83 VQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMPQNPYIIATK- 141
V N D + + G G+VT ++ + G N P +T
Sbjct: 55632 VSTSNPDAAASGGASTATGSKAPSGAVTIRVGAQGNNVQSGSSNAQSSAPSGTISSSTSG 55811
Query: 142 ---TPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDH 198
TP+A ++ D ++ P+ LRGH+ E + +WN + + L S S D
Sbjct: 55812 GAGTPAA-LVPMDIDENIEIPESKARV-----LRGHESEVFICAWNPS-RDLLASGSGDS 55970
Query: 199 TVCLWDIS-AGPKEGKIVDAKAIFTGHSAV------------VEDVAWHL---------- 235
T +WD+S A ++V I G + V V +WHL
Sbjct: 55971 TARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNVSRRSWHLSLAKFDF*SL 56150
Query: 236 --------LHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFIL 287
SL + + D IW T S ++ H + L +N +IL
Sbjct: 56151 LNLFSFLQCDGSLLATGSYDGYARIWKTDGRLAS----TLGQHKGPIFALKWNKCGNYIL 56318
Query: 288 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
+ G DKT +WD + F H V W + AS TD+R++V L
Sbjct: 56319 SAG-VDKTTIIWDASTGQC-TQQFAFHSAPALDVDWQTNQ--AFASCSTDQRIHVCRL-- 56480
Query: 348 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
G E + GHT +++ W P + ++ S S+D ++IW M
Sbjct: 56481 ------------GVNEPIKTFKGHTNEVNAIKWCP-QGQLLASCSDDMTLKIWSM 56606
>ref|NG_000510.1| Drosophila melanogaster alpha-Adaptin (alpha-Adaptin) on chromosome 2
Length = 13001
Score = 75.9 bits (185), Expect = 7e-12
Identities = 53/182 (29%), Positives = 82/182 (44%), Gaps = 8/182 (4%)
Frame = -1
Query: 174 HQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAW 233
H+ + L WN ++LSA D T +WD S G F HSA DV W
Sbjct: 1736 HKGPIFALKWNK-CGNYILSAGVDKTTIIWDASTG-------QCTQQFAFHSAPALDVDW 1581
Query: 234 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 293
F S + DQ++ + N +P + HT EVN + + P + +LA+ S D
Sbjct: 1580 QT--NQAFASCSTDQRIHVCRLGVN---EPIKTFKGHTNEVNAIKWCPQGQ-LLASCSDD 1419
Query: 294 KTVALWDLRNLKLKLHSFESHKDEIFQVHWS--------PHNETILASSGTDRRLNVWDL 345
T+ +W + N H ++H EI+ + WS P+ ILAS+ D + +WD+
Sbjct: 1418 MTLKIWSM-NRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDV 1242
Query: 346 SK 347
+
Sbjct: 1241 ER 1236
Score = 63.9 bits (154), Expect = 3e-08
Identities = 82/355 (23%), Positives = 130/355 (36%), Gaps = 35/355 (9%)
Frame = -1
Query: 83 VQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMPQNPYIIATK- 141
V N D + + G G+VT ++ + G N P +T
Sbjct: 2369 VSTSNPDAAASGGASTATGSKAPSGAVTIRVGAQGNNVQSGSSNAQSSAPSGTISSSTSG 2190
Query: 142 ---TPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDH 198
TP+A ++ D ++ P+ LRGH+ E + +WN + + L S S D
Sbjct: 2189 GAGTPAA-LVPMDIDENIEIPESKARV-----LRGHESEVFICAWNPS-RDLLASGSGDS 2031
Query: 199 TVCLWDIS-AGPKEGKIVDAKAIFTGHSAV------------VEDVAWHL---------- 235
T +WD+S A ++V I G + V V +WHL
Sbjct: 2030 TARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNVSRRSWHLSLAKFDF*SL 1851
Query: 236 --------LHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFIL 287
SL + + D IW T S ++ H + L +N +IL
Sbjct: 1850 LNLFSFLQCDGSLLATGSYDGYARIWKTDGRLAS----TLGQHKGPIFALKWNKCGNYIL 1683
Query: 288 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
+ G DKT +WD + F H V W + AS TD+R++V L
Sbjct: 1682 SAG-VDKTTIIWDASTGQC-TQQFAFHSAPALDVDWQTNQ--AFASCSTDQRIHVCRL-- 1521
Query: 348 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
G E + GHT +++ W P + ++ S S+D ++IW M
Sbjct: 1520 ------------GVNEPIKTFKGHTNEVNAIKWCP-QGQLLASCSDDMTLKIWSM 1395
>ref|NM_057981.1| Drosophila melanogaster ebi (ebi), transcript variant ebi-P1|CDS,
mRNA
Length = 2103
Score = 75.9 bits (185), Expect = 7e-12
Identities = 53/182 (29%), Positives = 82/182 (44%), Gaps = 8/182 (4%)
Frame = +1
Query: 174 HQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAW 233
H+ + L WN ++LSA D T +WD S G F HSA DV W
Sbjct: 1348 HKGPIFALKWNK-CGNYILSAGVDKTTIIWDASTG-------QCTQQFAFHSAPALDVDW 1503
Query: 234 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 293
F S + DQ++ + N +P + HT EVN + + P + +LA+ S D
Sbjct: 1504 QT--NQAFASCSTDQRIHVCRLGVN---EPIKTFKGHTNEVNAIKWCPQGQ-LLASCSDD 1665
Query: 294 KTVALWDLRNLKLKLHSFESHKDEIFQVHWS--------PHNETILASSGTDRRLNVWDL 345
T+ +W + N H ++H EI+ + WS P+ ILAS+ D + +WD+
Sbjct: 1666 MTLKIWSM-NRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDV 1842
Query: 346 SK 347
+
Sbjct: 1843 ER 1848
Score = 64.7 bits (156), Expect = 2e-08
Identities = 78/370 (21%), Positives = 138/370 (37%), Gaps = 50/370 (13%)
Frame = +1
Query: 83 VQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMPQNPYIIATK- 141
V N D + + G G+VT ++ + G N P +T
Sbjct: 793 VSTSNPDAAASGGASTATGSKAPSGAVTIRVGAQGNNVQSGSSNAQSSAPSGTISSSTSG 972
Query: 142 ---TPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDH 198
TP+A ++ D ++ P+ LRGH+ E + +WN + + L S S D
Sbjct: 973 GAGTPAA-LVPMDIDENIEIPESKARV-----LRGHESEVFICAWNPS-RDLLASGSGDS 1131
Query: 199 TVCLWDIS-AGPKEGKIVDAKAIFTGHSAV-----VEDVAWHLLHESLFGSVADDQKLMI 252
T +WD+S A ++V I G + V V + W+ SL + + D I
Sbjct: 1132 TARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNC-DGSLLATGSYDGYARI 1308
Query: 253 WDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN--------- 303
W T S ++ H + L +N +IL+ G DKT +WD
Sbjct: 1309 WKTDGRLAS----TLGQHKGPIFALKWNKCGNYILSAG-VDKTTIIWDASTGQCTQQFAF 1473
Query: 304 -------------------------------LKLKLHSFESHKDEIFQVHWSPHNETILA 332
+ + +F+ H +E+ + W P + +LA
Sbjct: 1474 HSAPALDVDWQTNQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQ-LLA 1650
Query: 333 SSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 392
S D L +W +++ ++ D + E+ I T ++ NPN ++ S S
Sbjct: 1651 SCSDDMTLKIWSMNR---DRCCHDLQAHSKEIYTIKWSPTGPGTN---NPNTNLILASAS 1812
Query: 393 EDNIMQIWQM 402
D+ +++W +
Sbjct: 1813 FDSTVRLWDV 1842
>gb|AE003589.2|AE003589 Drosophila melanogaster genomic scaffold 142000013386046 section 2 of 16,
complete sequence
Length = 302473
Score = 75.9 bits (185), Expect = 7e-12
Identities = 53/182 (29%), Positives = 82/182 (44%), Gaps = 8/182 (4%)
Frame = +2
Query: 174 HQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAW 233
H+ + L WN ++LSA D T +WD S G F HSA DV W
Sbjct: 107435 HKGPIFALKWNK-CGNYILSAGVDKTTIIWDASTG-------QCTQQFAFHSAPALDVDW 107590
Query: 234 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 293
F S + DQ++ + N +P + HT EVN + + P + +LA+ S D
Sbjct: 107591 QT--NQAFASCSTDQRIHVCRLGVN---EPIKTFKGHTNEVNAIKWCPQGQ-LLASCSDD 107752
Query: 294 KTVALWDLRNLKLKLHSFESHKDEIFQVHWS--------PHNETILASSGTDRRLNVWDL 345
T+ +W + N H ++H EI+ + WS P+ ILAS+ D + +WD+
Sbjct: 107753 MTLKIWSM-NRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDV 107929
Query: 346 SK 347
+
Sbjct: 107930 ER 107935
Score = 63.9 bits (154), Expect = 3e-08
Identities = 82/355 (23%), Positives = 130/355 (36%), Gaps = 35/355 (9%)
Frame = +2
Query: 83 VQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMPQNP