TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(555 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,171,752 sequences; 566,364,212 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
gb|M81846.1|CHKIL1REC Gallus gallus IL-1 receptor I mRNA, c... 1039 0.0
ref|NM_000877.1| Homo sapiens interleukin 1 receptor, type ... 409 e-112
gb|M27492.1|HUMIL1RA Human interleukin 1 receptor mRNA, com... 409 e-112
ref|XM_002686.6| Homo sapiens interleukin 1 receptor, type ... 409 e-112
emb|X16896.1|HSIL1RFT Human mRNA for interleukin-1 receptor... 409 e-112
gb|M95578.1|RATIL1R Rattus notvegicus Sprague-Dawley interl... 393 e-107
ref|NM_008362.1| Mus musculus interleukin 1 receptor, type ... 384 e-104
gb|M20658.1|MUSIL1TCR Mouse interleukin-1 receptor mRNA, co... 384 e-104
dbj|AB020338.1|AB020338 Equus caballus mRNA for interleukin... 383 e-104
gb|U49066.1|RNU49066 Rattus norvegicus interleukin-1 recept... 341 1e-91
gb|AF284433.1|AF284433 Mus musculus IL-1Rrp2 mRNA, complete... 337 1e-90
gb|AF284434.1|AF284434 Homo sapiens IL-1Rrp2 mRNA, complete... 337 2e-90
ref|NM_003854.1| Homo sapiens interleukin 1 receptor-like 2... 337 2e-90
gb|U49065.1|HSU49065 Human interleukin-1 receptor-related p... 337 2e-90
ref|XM_002685.2| Homo sapiens interleukin 1 receptor-like 2... 337 2e-90
dbj|AB041738.2|AB041738 Gallus gallus mRNA for ST2L, comple... 227 2e-57
dbj|AB041739.2|AB041739 Gallus gallus mRNA for ST2LV, compl... 204 2e-50
dbj|D13695.1|MUSST2L Mus musculus mRNA for ST2L protein, co... 202 5e-50
dbj|AB012701.2|AB012701 Homo sapiens mRNA for ST2L, 5' nonc... 201 1e-49
ref|NM_016232.2| Homo sapiens interleukin 1 receptor-like 1... 201 1e-49
gb|U04317.1|RNU04317 Rattus norvegicus Fit-1M (Fit-1) mRNA,... 197 2e-48
ref|NM_013123.1| Rattus norvegicus Interleukin 1 receptor, ... 177 2e-42
gb|U14010.1|RNU14010 Rattus norvegicus soluble IL-1 recepto... 177 2e-42
ref|NM_030688.1| Mus musculus interkeukin 1 receptor access... 176 4e-42
gb|AF284437.1|AF284437 Mus musculus TIGIRR-1 mRNA, complete... 176 4e-42
gb|S70238.1|S70238 type I interleukin-1 receptor [rats, int... 175 9e-42
ref|NM_017416.1| Homo sapiens interleukin 1 receptor access... 174 3e-41
emb|AJ272208.1|HSA272208 Homo sapiens mRNA for IL-1 recepto... 174 3e-41
gb|AF181285.1|AF181285 Homo sapiens X-linked interleukin-1 ... 174 3e-41
emb|AJ290436.1|HSA290436 Homo sapiens mRNA for IL1RAPL-2 re... 174 3e-41
gb|AF212016.1|AF212016 Homo sapiens interleukin-1 receptor ... 174 3e-41
ref|XM_034808.1| Homo sapiens interleukin 1 receptor access... 174 3e-41
gb|AF284436.1|AF284436 Homo sapiens TIGIRR-1 mRNA, complete... 174 3e-41
gb|AF181284.1|AF181284 Homo sapiens X-linked interleukin-1 ... 167 3e-39
ref|NM_014271.1| Homo sapiens interleukin 1 receptor access... 167 3e-39
emb|AJ243874.1|HSA243874 Homo sapiens mRNA for oligophrenin... 167 3e-39
gb|AF284435.1|AF284435 Homo sapiens TIGIRR-2 mRNA, complete... 167 3e-39
ref|NM_008364.1| Mus musculus interleukin 1 receptor access... 150 3e-34
emb|X85999.1|MMIL1RACP M.musculus mRNA for interleukin 1 re... 150 3e-34
ref|NM_002182.1| Homo sapiens interleukin 1 receptor access... 149 5e-34
dbj|AB006537.1|AB006537 Homo sapiens mRNA for interleukin 1... 149 5e-34
gb|AF029213.1|AF029213 Homo sapiens IL-1 receptor accessory... 149 5e-34
ref|NM_003855.1| Homo sapiens interleukin 18 receptor 1 (IL... 143 5e-32
gb|U43672.1|HSU43672 Human putative transmembrane receptor ... 143 5e-32
gb|U48592.1|RNU48592 Rattus norvegicus interleukin-1 recept... 141 1e-31
ref|NM_012968.1| Rattus norvegicus Interleukin 1 receptor a... 141 1e-31
gb|U64094.1|HSU64094 Human soluble type II interleukin-1 re... 138 2e-30
emb|X59770.1|HSIL1R2II H.sapiens IL-1R2 mRNA for type II in... 138 2e-30
ref|NM_004633.1| Homo sapiens interleukin 1 receptor, type ... 138 2e-30
gb|U64092.1|CGU64092 Cercopithecidae gen. sp. type II inter... 137 3e-30
gb|U64093.1|CGU64093 Cercopithecidae gen. sp. soluble type ... 137 3e-30
gb|U74649.1|HSU74649 Human interleukin-1 receptor type II m... 133 4e-29
ref|NM_008365.1| Mus musculus interleukin 18 receptor 1 (Il... 132 1e-28
gb|U43673.1|MMU43673 Mus musculus putative transmembrane re... 132 1e-28
gb|AC007271.3|AC007271 Homo sapiens BAC clone RP11-4B12 fro... 122 7e-26
gb|BC012346.1|BC012346 Homo sapiens, Similar to interleukin... 121 2e-25
emb|AJ277831.1|MMU277831 Mus musculus mRNA for IL1RAPL-2 re... 121 2e-25
gb|AC007248.3|AC007248 Homo sapiens BAC clone RP11-315O22 f... 121 2e-25
emb|X59769.1|MMIL1R2 Mouse Il-1r2 mRNA for type II interleu... 120 3e-25
ref|NM_010555.1| Mus musculus interleukin 1 receptor, type ... 120 3e-25
dbj|AK026803.1|AK026803 Homo sapiens cDNA: FLJ23150 fis, cl... 118 1e-24
ref|NM_003853.1| Homo sapiens interleukin 18 receptor acces... 117 4e-24
gb|AF077346.1|AF077346 Homo sapiens interleukin-18 receptor... 117 4e-24
ref|NM_053953.1| Rattus norvegicus interleukin 1 receptor, ... 117 4e-24
emb|Z22812.1|RNINL1R2A R.norvegicus interleukin-1 receptor ... 117 4e-24
dbj|AB033415.1|AB033415 Equus caballus IL-1RII mRNA for int... 113 5e-23
ref|NM_010743.1| Mus musculus interleukin 1 receptor-like 1... 112 7e-23
emb|Y07519.1|MMST2 Mouse ST2 gene 112 7e-23
gb|M24843.1|MUST1A Mouse T1 protein mRNA, complete cds 112 7e-23
ref|NM_013037.1| Rattus norvegicus Interleukin 1 receptor-l... 110 4e-22
gb|U04319.1|RNU04319 Rattus norvegicus Fit-1S (Fit-1) mRNA,... 110 4e-22
dbj|AB041737.2|AB041737 Gallus gallus mRNA for ST2, complet... 110 5e-22
ref|NM_003856.1| Homo sapiens interleukin 1 receptor-like 1... 109 6e-22
dbj|D12763.1|HUMST2M Homo sapiens mRNA for ST2 protein 109 6e-22
ref|NM_010553.1| Mus musculus interleukin 18 receptor acces... 107 3e-21
gb|AF077347.1|AF077347 Mus musculus interleukin-18 receptor... 107 3e-21
gb|BC021159.1|BC021159 Mus musculus, Similar to interleukin... 96 1e-17
dbj|AB029084.1|AB029084 Homo sapiens ST2V mRNA, complete cds 94 3e-17
ref|XM_036436.4| Homo sapiens interleukin 1 receptor access... 90 5e-16
gb|BC012580.1|BC012580 Homo sapiens, Similar to interleukin... 90 5e-16
gb|BC016141.1|BC016141 Homo sapiens, interleukin 1 receptor... 90 5e-16
gb|AF167343.1|AF167343 Homo sapiens soluble interleukin-1 r... 90 5e-16
gb|AF380138.1|AF380138 Monkeypox virus strain Zaire-96-I-16... 84 3e-14
gb|M35027.1|VACCG Vaccinia virus, complete genome 84 3e-14
emb|Y15035.1|CVY15035 Cowpox virus strain GRI-90 DNA (49 kb... 81 2e-13
gb|U94848.1|U94848 Vaccinia virus strain Ankara, complete g... 80 4e-13
gb|AF095689.1|AF095689 Vaccinia virus (strain Tian Tan) com... 80 4e-13
dbj|D11079.1|VACRHF Vaccinia virus genomic DNA, 42kbp from ... 80 7e-13
emb|X56121.1|VVB15RG Vaccinia virus B15R gene for 36.5 kDa ... 80 7e-13
dbj|D01018.1|VACB15RW Vaccinia virus DNA for B15R protein, ... 80 7e-13
gb|M95202.1|PXRIL1XX Poxvirus interleukin-1 binding protein... 79 9e-13
gb|BC004628.1|BC004628 Mus musculus, clone IMAGE:3585952, mRNA 77 4e-12
ref|XM_013114.2| Homo sapiens interleukin 1 receptor access... 74 5e-11
emb|AJ276474.2|OMY276474 Oncorhynchus mykiss mRNA for inter... 73 6e-11
dbj|AB041748.1|AB041740S9 Gallus gallus gene for ST2L, ST2L... 72 1e-10
emb|AJ277110.1|EVI277110 Ectromelia virus IL1RB for Interle... 72 2e-10
gb|AF012825.1|AF012825 Ectromelia virus envelope glycoprote... 72 2e-10
gb|BC020296.1|BC020296 Mus musculus, clone IMAGE:4008181, mRNA 67 5e-09
dbj|AB041747.1|AB041740S8 Gallus gallus st2 gene, exon 11 61 2e-07
gb|AC007165.3|AC007165 Homo sapiens BAC clone RP11-451C2, c... 57 6e-06
gb|AF325528.1|AF325528 Lumpy skin disease virus isolate Nee... 55 1e-05
ref|XM_053531.3| Homo sapiens fibulin 6 (FIBL-6), mRNA 54 4e-05
dbj|AK056557.1|AK056557 Homo sapiens cDNA FLJ31995 fis, clo... 53 7e-05
gb|AF156100.1|AF156100 Homo sapiens hemicentin mRNA, comple... 52 1e-04
gb|AF157560.1|AF157560 Danio rerio fibroblast growth factor... 52 2e-04
emb|Z81144.1|HSU129B7 Human DNA sequence from cosmid U129B7... 52 2e-04
gb|M35195.1|CHKCEK2 Chicken tyrosine kinase (cek2) mRNA, co... 51 3e-04
ref|NM_058889.1| immunoglobin-like protein 51 3e-04
gb|AF003131.1| Caenorhabditis elegans cosmid C09D1, complet... 51 3e-04
gb|U33058.1|CEU33058 Caenorhabditis elegans UNC-89 (unc-89)... 51 3e-04
emb|AJ309935.1|GGA309935 Gallus gallus mRNA for FAR-2 protein 51 3e-04
dbj|AK057278.1|AK057278 Homo sapiens cDNA FLJ32716 fis, clo... 50 4e-04
gb|S78201.1|S78201 Sheeppox virus strain KS-1 Q2/1L (Q2/1L)... 50 4e-04
ref|XM_087430.1| Homo sapiens similar to axonal-associated ... 50 4e-04
emb|X60184.1|MMST2G Mouse ST2 gene for growth-associated pr... 50 6e-04
ref|NM_021805.1| Homo sapiens single Ig IL-1R-related molec... 50 7e-04
dbj|AK025099.1|AK025099 Homo sapiens cDNA: FLJ21446 fis, cl... 50 7e-04
gb|BC003591.1|BC003591 Homo sapiens, single Ig IL-1R-relate... 50 7e-04
gb|AC087076.1|AC087076 Caenorhabditis briggsae cosmid CB032... 49 0.001
emb|X90569.1|HSTITINN2 H.sapiens mRNA for titin protein (cl... 49 0.001
ref|NM_053879.1| Rattus norvegicus axonal-associated cell a... 49 0.001
gb|U35371.1|RNU35371 Rattus norvegicus neural cell adhesion... 49 0.001
emb|X63101.1|GDAXONIN G.domesticus mRNA for axonin-1 49 0.001
emb|Y14852.1|OCY14852 Oryctolagus cuniculus mRNA for tintin... 49 0.002
ref|XM_080991.1| off-track, mRNA 49 0.002
ref|NM_011248.1| Mus musculus retinoblastoma inhibiting gen... 48 0.002
gb|AF060570.1|AF060570 Mus musculus rig-1 protein mRNA, com... 48 0.002
emb|X75603.1|PWFGFR3 P.waltlii mRNA for fibroblast growth f... 48 0.003
ref|NM_078981.1| Drosophila melanogaster off-track (otk), mRNA 47 0.004
emb|X63453.1|DMDTRK D.melanogaster mRNA for gp160-Dtrk 47 0.004
gb|L08960.1|CHKBRVO Chicken cell adhesion molecule (Bravo) ... 47 0.004
emb|AL031575.1|HS127F18 Human DNA sequence from clone 127F1... 47 0.004
ref|XM_070947.1| Homo sapiens hypothetical gene LOC138524 (... 47 0.004
dbj|AB013803.2|AB013803 Homo sapiens mRNA for hNB-2s, compl... 47 0.005
gb|AF438165.1| Camelpox virus isolate M-96 from Kazakhstan,... 47 0.005
ref|NM_014361.1| Homo sapiens contactin 5 (CNTN5), mRNA 47 0.005
dbj|AB013802.2|AB013802 Homo sapiens mRNA for hNB-2, comple... 47 0.005
ref|XM_012030.4| Homo sapiens contactin 5 (CNTN5), mRNA 47 0.005
dbj|AK018522.1|AK018522 Mus musculus adult male colon cDNA,... 47 0.006
ref|XM_046812.4| Homo sapiens contactin 2 (axonal) (CNTN2),... 47 0.006
ref|NM_017383.1| Mus musculus contactin 6 (Cntn6), mRNA 47 0.006
dbj|AB032602.1|AB032602 Mus musculus mNB-3 mRNA for neural ... 47 0.006
emb|X58482.1|GGNRCAM Chicken mRNA for neuronal transmembran... 47 0.006
ref|NM_005076.1| Homo sapiens contactin 2 (axonal) (CNTN2),... 47 0.006
emb|X67734.1|HSTAG1A H.sapiens mRNA for transient axonal gl... 47 0.006
ref|XM_093169.1| Homo sapiens similar to dA127F18.1 (PUTATI... 47 0.006
emb|X68274.1|HSTAG1 H.sapiens mRNA for TAG-1/axonin-1 47 0.006
ref|NM_077235.1| Ig superfamily repeats (I-type) 46 0.011
gb|AF461119.1|AF461119 Xenopus laevis roundabout-1 (robo1) ... 46 0.011
gb|AF064799.1|AF064799 Danio rerio transiently expressed ax... 46 0.011
ref|NM_077234.1| IG (immunoglobulin) superfamily (47 domains) 46 0.011
gb|AF074901.1|AF074901 Caenorhabditis elegans hemicentin pr... 46 0.011
dbj|AB050468.1|AB050468 Homo sapiens mRNA for membrane glyc... 45 0.018
gb|AF176552.1|AF176552 Mus musculus fibroblast growth facto... 45 0.018
emb|AL117666.1|HSM801204 Homo sapiens mRNA; cDNA DKFZp586O1... 45 0.018
ref|NM_023059.1| Mus musculus single Ig IL-1 receptor relat... 45 0.018
gb|AF113795.1|AF113795 Mus musculus toll/interleukin-1 rece... 45 0.018
ref|NM_013225.1| Rattus norvegicus contactin 6 (Cntn6), mRNA 45 0.018
gb|AF381545.1|AF381545 Homo sapiens membrane glycoprotein L... 45 0.018
gb|AF336128.1|AF336128S1 Lumpy skin disease virus strain Ne... 45 0.018
dbj|D87248.1|D87248 Rattus norvegicus mRNA for NB-3, comple... 45 0.018
ref|XM_033712.3| Homo sapiens ortholog of mouse integral me... 45 0.018
ref|NM_080531.1| Drosophila melanogaster leak (lea), mRNA 44 0.031
gb|AF312579.1|AF312579 Drosophila melanogaster roundabout 2... 44 0.031
dbj|D85084.1|D85084 Cynops pyrrhogaster mRNA for NCAM-180, ... 44 0.041
ref|NM_013062.1| Rattus norvegicus FLK1 kinase insert domai... 44 0.041
gb|U93306.1|RNU93306 Rattus norvegicus VEGF receptor-2/FLK-... 44 0.041
dbj|D11474.1|CHKMP Chicken mRNA for M-protein, complete cds 44 0.041
gb|U93307.1|RNU93307 Rattus norvegicus C-terminal truncated... 44 0.041
emb|Y16780.1|VMVY16780 variola minor virus complete genome 32 0.050
dbj|AB007035.1|AB007035 Xenopus laevis mRNA for FGF recepto... 44 0.053
gb|AF389400.1|AF389400 Danio rerio fibroblast growth factor... 44 0.053
dbj|AK056544.1|AK056544 Homo sapiens cDNA FLJ31982 fis, clo... 44 0.053
gb|U18339.1|VVU18339 Variola virus Garcia-1966 right near-t... 32 0.055
emb|X72086.1|VMVGEN Variola minor virus complete genome 32 0.056
gb|U80022.2| Caenorhabditis elegans cosmid F12F3, complete ... 43 0.070
ref|NM_072181.1| titin 43 0.070
gb|AY060635.1| Drosophila melanogaster GH05059 full length ... 43 0.070
gb|BC010806.1|BC010806 Mus musculus, Similar to single Ig I... 43 0.070
emb|Z68328.1|HSU72E5 Human DNA sequence from cosmid cU72E5,... 43 0.091
emb|X57790.1|MMFGFRLA M.musculus fibroblast growth factor r... 43 0.091
emb|X99043.1|MMBIG2A M.musculus mRNA for brain-derived immu... 43 0.091
ref|NM_010206.1| Mus musculus fibroblast growth factor rece... 43 0.091
gb|M28998.1|MUSBFGFR Mouse basic fibroblast growth factor r... 43 0.091
emb|AJ312133.1|DME312133 Drosophila melanogaster mRNA for t... 43 0.091
emb|AJ312135.1|DME312135 Drosophila melanogaster mRNA for t... 43 0.091
ref|NM_007518.1| Mus musculus axonal-associated cell adhesi... 43 0.091
dbj|AB041742.1|AB041740S3 Gallus gallus st2 gene, exon 3, 4, 5 43 0.091
gb|M65053.1|MUSFGFBC Mouse fibroblast growth factor mRNA, c... 43 0.091
emb|AJ312134.1|DME312134 Drosophila melanogaster mRNA for t... 43 0.091
ref|NM_010612.1| Mus musculus kinase insert domain protein ... 42 0.12
emb|X59397.1|MMFLK1 Mouse Flk-1 mRNA for a tyrosine kinase ... 42 0.12
gb|BC020530.1|BC020530 Mus musculus, kinase insert domain p... 42 0.12
ref|NM_053746.1| Rattus norvegicus contactin 5 (Cntn5), mRNA 42 0.12
dbj|D87212.1|D87212 Rattus norvegicus mRNA for NB-2, comple... 42 0.12
gb|AF388035.1|AF388035 Xenopus laevis membrane protein CDO ... 42 0.12
emb|X70842.1|MMFLK1M M.musculus Flk-1 mRNA 42 0.12
gb|AY075492.1| Drosophila melanogaster RE47547 full length ... 42 0.12
ref|NM_004540.1| Homo sapiens neural cell adhesion molecule... 42 0.12
gb|U75330.1|HSU75330 Human neural cell adhesion protein (NC... 42 0.12
ref|NM_008377.1| Mus musculus integral membrane glycoprotei... 42 0.16
dbj|D78572.1|D78572 Mus musculus mRNA for membrane glycopro... 42 0.16
ref|NM_003319.1| Homo sapiens titin (TTN), mRNA 42 0.20
emb|X90568.1|HSTITIN2B H.sapiens mRNA for titin protein (cl... 42 0.20
gb|AF461120.1|AF461120 Danio rerio brother of CDO (boc) mRN... 42 0.20
emb|X65224.1|GGNEUFASC G.gallus mRNA for neurofascin 42 0.20
ref|NM_069872.1| Fibronectin type III domain (31 domains), ... 42 0.20
gb|AC084594.1|CBRG42E21 Caenorhabditis briggsae cosmid G42E... 42 0.20
ref|NM_069873.1| Fibronectin type III domain (31 domains), ... 42 0.20
ref|NM_016952.1| Homo sapiens cell adhesion molecule-relate... 42 0.20
gb|AF004841.1|AF004841 Homo sapiens CDO mRNA, complete cds 42 0.20
gb|S53103.1|S53103 NYK/FLK-1= platelet-derived growth facto... 42 0.20
ref|XM_009705.5| Homo sapiens neural cell adhesion molecule... 42 0.20
ref|XM_038278.4| Homo sapiens titin (TTN), mRNA 42 0.20
ref|NM_008664.1| Mus musculus myomesin 2 (Myom2), mRNA 41 0.27
ref|NM_021339.1| Mus musculus cell adhesion molecule-relate... 41 0.27
gb|AF090866.1|AF090866 Mus musculus CDO (Cdo) mRNA, complet... 41 0.27
emb|AJ001038.1|MMMPROT Mus musculus mRNA for M-protein 41 0.27
gb|AF167341.1|F167333S09 Homo sapiens membrane interleukin ... 41 0.27
gb|L22579.1|VARCG Variola major virus (strain Bangladesh-19... 41 0.35
gb|AF200348.1|AF200348 Homo sapiens melanoma-associated ant... 41 0.35
ref|XM_081958.1| Poly-glutamine tract binding protein 1, mRNA 41 0.35
ref|XM_056455.1| Homo sapiens Melanoma associated gene (D2S... 41 0.35
gb|M77196.1|MUSHPVRA Mouse hepatitis virus receptor mRNA, c... 41 0.35
emb|AJ278495.1|DME278495 Drosophila melanogaster mRNA for P... 41 0.35
gb|BC016891.1|BC016891 Mus musculus, clone MGC:18556 IMAGE:... 41 0.35
gb|U81035.1|RNU81035 Rattus norvegicus ankyrin binding cell... 41 0.35
emb|X67279.1|MMBGPD M.musculus Bgpd mRNA for biliary glycop... 41 0.35
dbj|D86983.1|D86983 Human mRNA for KIAA0230 gene, partial cds 41 0.35
gb|L11002.1|RATANKBIND Rat ankyrin binding glycoprotein-1 r... 41 0.35
emb|X15351.1|MMMCEA1 Mouse mRNA fragment for carcinoembryon... 41 0.35
emb|X78568.1|MMEMRK2 M.musculus EmRK2 cDNA 41 0.35
gb|M18216.1|HUMANTNCA Human nonspecific crossreacting antig... 41 0.35
gb|U81036.1|RNU81036 Rattus norvegicus ankyrin binding cell... 41 0.35
ref|NM_002483.1| Homo sapiens carcinoembryonic antigen-rela... 41 0.35
gb|M29541.1|HUMNCB Human normal cross-reacting antigen mRNA... 41 0.35
emb|X15423.1|CEUNC22 Caenorhabditis elegans unc-22 gene for... 40 0.45
ref|NM_010228.1| Mus musculus FMS-like tyrosine kinase 1 (F... 40 0.45
gb|L07297.1|MUSRTKB Mus musculus receptor tyrosine kinase (... 40 0.45
gb|AE003473.1|AE003473 Drosophila melanogaster genomic scaf... 40 0.45
gb|AC010063.6| Drosophila melanogaster 3L BAC RPCI98-16A3 (... 40 0.45
dbj|D88689.1|D88689 Mus musculus mRNA for flt-1, complete cds 40 0.45
gb|L10351.1|CELTWIMUSC Caenorhabditis elegans gene, exons 1... 40 0.45
emb|AJ271740.1|DME271740 Drosophila melanogaster D-Titin ge... 40 0.45
gb|AF239957.1|AF239957 Mus musculus single Ig IL-1R-related... 40 0.45
gb|M24637.1|CHKCEK1 Chicken tyrosine kinase (cek1) mRNA, co... 40 0.45
ref|NM_019306.1| Rattus norvegicus Fms-related tyrosine kin... 40 0.45
emb|Z73897.1|CEZK617 Caenorhabditis elegans cosmid ZK617, c... 40 0.45
dbj|D28498.1|RATFLT1 Rat mRNA for Flt-1 tyrosine kinase rec... 40 0.45
ref|XM_039993.2| Homo sapiens fms-related tyrosine kinase 1... 40 0.59
gb|AY061639.1| Rattus norvegicus neurofascin 155 kDa isofor... 40 0.59
gb|AF001287.1|AF001287 Mus musculus OCAM-TM protein precurs... 40 0.59
gb|AF001286.1|AF001286 Mus musculus OCAM-GPI protein precur... 40 0.59
ref|NM_002019.1| Homo sapiens fms-related tyrosine kinase 1... 40 0.59
emb|X51602.1|HSFLT Human flt mRNA for receptor-related tyro... 40 0.59
gb|AF063657.1|AF063657 Homo sapiens vascular endothelial gr... 40 0.59
ref|NM_010954.1| Mus musculus neural cell adhesion molecule... 40 0.59
gb|AF016619.1|AF016619 Mus musculus Rb-8 neural cell adhesi... 40 0.59
emb|X65943.1|XLFGFR2 X.laevis mRNA for fibroblast growth fa... 40 0.77
ref|NM_008011.1| Mus musculus fibroblast growth factor rece... 40 0.77
emb|X59927.1|MMFGFR4M M.musculus mRNA for fibroblast growth... 40 0.77
ref|NM_072787.1| peroxidase 40 0.77
gb|AF304131.1|AF304131 Danio rerio transmembrane receptor R... 39 1.0
gb|AC084686.1|CBRMM39H11 Caenorhabditis briggsae cosmid MM3... 39 1.0
gb|AF337036.1|AF337036 Danio rerio roundabout3 (robo3) mRNA... 39 1.0
gb|M34641.1|HUMFGF1A Human fibroblast growth factor (FGF) r... 39 1.0
dbj|D88690.1|D88690 Mus musculus mRNA for sFlt-1, complete cds 39 1.0
dbj|AK005502.1|AK005502 Mus musculus adult female placenta ... 39 1.0
ref|NM_007831.1| Mus musculus deleted in colorectal carcino... 39 1.0
emb|X85788.1|MMDCCTSG M.musculus mRNA for DCC tumour suppre... 39 1.0
gb|M96934.1|MUSHEPVR Mus musculus hepatitis virus receptor ... 39 1.0
ref|NM_017358.1| Rattus norvegicus immunoglobulin superfami... 39 1.0
gb|AF004840.1|AF004840 Rattus norvegicus CDO (cdo) mRNA, co... 39 1.0
emb|X69198.1|VVCGAA Variola virus DNA complete genome 35 1.3
gb|AC103548.7| Drosophila melanogaster X BAC RP98-19J1 (Ros... 39 1.3
ref|NM_057942.1| Drosophila melanogaster sidekick (sdk), tr... 39 1.3
emb|AJ250859.1|DME250859 Drosophila melanogaster mRNA for P... 39 1.3
gb|U07820.1|HSU07820 Human contactin 2 precursor (CNTN1) mR... 39 1.3
gb|AY069789.1| Drosophila melanogaster SD03187 full length ... 39 1.3
gb|BC008124.1|BC008124 Homo sapiens, clone IMAGE:4149230, m... 39 1.3
ref|NM_001843.1| Homo sapiens contactin 1 (CNTN1), mRNA 39 1.3
gb|U07819.1|HSU07819 Human contactin 1 precursor (CNTN1) mR... 39 1.3
emb|Z21488.1|HSCNTCTNA H.sapiens contactin mRNA, 39 1.3
ref|XM_046808.4| Homo sapiens KIAA0756 protein (KIAA0756), ... 39 1.3
ref|NM_012841.1| Rattus norvegicus Deleted in colcorectal c... 39 1.3
emb|Z74477.1|HSU42H12 Human DNA sequence from cosmid U42H12... 39 1.3
gb|U68725.1|RNU68725 Rattus norvegicus Deleted in colorecta... 39 1.3
gb|U88578.1|DMU88578 Drosophila melanogaster sdk mRNA, comp... 39 1.3
gb|M63437.1|CHKKLGG Chicken KLG gene, complete cds 39 1.3
ref|NG_000633.1| Drosophila melanogaster sidekick (sdk) on ... 39 1.3
ref|NM_078785.1| Drosophila melanogaster PDGF- and VEGF-rec... 39 1.3
dbj|AB018299.1|AB018299 Homo sapiens mRNA for KIAA0756 prot... 39 1.3
ref|NM_014813.1| Homo sapiens KIAA0806 gene product (KIAA08... 39 1.3
ref|NM_057941.1| Drosophila melanogaster sidekick (sdk), tr... 39 1.3
gb|AE003418.1|AE003418 Drosophila melanogaster genomic scaf... 39 1.3
dbj|AB040929.1|AB040929 Homo sapiens mRNA for KIAA1496 prot... 39 1.3
dbj|AB018349.1|AB018349 Homo sapiens mRNA for KIAA0806 prot... 39 1.3
emb|AL132792.2|DMBR19J1 Drosophila melanogaster BAC clone B... 39 1.3
emb|X67117.1|VVXHOIFOH Variola virus (XhoI-F,O,H,P,Q genome... 35 1.5
ref|NM_023108.1| Homo sapiens fibroblast growth factor rece... 39 1.7
gb|M34188.1|HUMFGF5H Human fibroblast growth factor recepto... 39 1.7
emb|X66945.1|HSNSAMTK H.sapiens N-sam mRNA for fibroblast g... 39 1.7
gb|M34185.1|HUMFGF2H Human fibroblast growth factor recepto... 39 1.7
ref|XM_049463.1| Homo sapiens fibroblast growth factor rece... 39 1.7
ref|NM_023106.1| Homo sapiens fibroblast growth factor rece... 39 1.7
gb|U23445.1|MMU23445 Mus musculus fibroblast growth factor ... 39 1.7
gb|M37722.1|HUMBFGFS Human shorter form basic fibroblast gr... 39 1.7
ref|NM_000604.2| Homo sapiens fibroblast growth factor rece... 39 1.7
dbj|AB056413.1|AB056413 Macaca fascicularis brain cDNA, clo... 39 1.7
gb|M18728.1|HUMNCA Human nonspecific crossreacting antigen ... 39 1.7
gb|M60485.1|HUMFGFAA Human fibroblast growth factor recepto... 39 1.7
gb|M63889.1|HUMHBGFC Human heparin-binding growth factor re... 39 1.7
gb|U70354.1|HMU70354 Halichoeres maculipinna clone CL142 un... 39 1.7
emb|X57121.1|HSFGR3IGA Human mRNA for fibroblast growth rec... 39 1.7
gb|M63888.1|HUMHBGFBV Human heparin-binding growth factor r... 39 1.7
ref|NM_015850.2| Homo sapiens fibroblast growth factor rece... 39 1.7
emb|X51803.1|HSFGFR Human mRNA for fibroblast growth factor... 39 1.7
ref|NM_023111.1| Homo sapiens fibroblast growth factor rece... 39 1.7
emb|X51893.1|MMFGF Mouse fms-like gene (mflg) mRNA for fibr... 39 1.7
emb|X57122.1|HSFGR2IG Human mRNA for fibroblast growth rece... 39 1.7
gb|M34187.1|HUMFGF4H Human fibroblast growth factor recepto... 39 1.7
ref|NM_023107.1| Homo sapiens fibroblast growth factor rece... 39 1.7
emb|X57119.1|HSFGR2IGA Human mRNA for fibroblast growth rec... 39 1.7
emb|X52833.1|HSFGFRFL Human flg mRNA for fibroblast growth ... 39 1.7
gb|M63887.1|HUMHBGFA Human heparin-binding growth factor re... 39 1.7
dbj|AB056375.1|AB056375 Macaca fascicularis brain cDNA, clo... 39 1.7
gb|BC005008.1|BC005008 Homo sapiens, carcinoembryonic antig... 39 1.7
gb|U22324.1|MMU22324 Mus musculus fibroblast growth factor ... 39 1.7
ref|NM_023105.1| Homo sapiens fibroblast growth factor rece... 39 1.7
emb|X57120.1|HSFGR3IG Human mRNA for fibroblast growth rece... 39 1.7
ref|NM_023109.1| Homo sapiens fibroblast growth factor rece... 39 1.7
emb|AL445834.1|CNS07EEC Homo sapiens (human) Human Heparan ... 39 1.7
emb|AJ306906.1|HSA306906 Homo sapiens partial mRNA for fibu... 38 2.2
gb|AC007579.4|AC007579 Drosophila melanogaster, chromosome ... 38 2.2
gb|AC004516.1|AC004516 Drosophila melanogaster DNA sequence... 38 2.2
dbj|D32135.1|BOVF3F11C Bovine mRNA for F3/F11/contactin, co... 38 2.2
gb|AE003808.2|AE003808 Drosophila melanogaster genomic scaf... 38 2.2
dbj|D14977.1|DROFGFR2 D.melanogaster mRNA for fibroblast gr... 38 2.9
emb|X74030.1|DMDFR1 D.melanogaster mRNA for DFR1 protein (F... 38 2.9
gb|AY029401.1| Danio rerio cell adhesion molecule PCAM mRNA... 38 2.9
gb|AF368288.1|AF368288 Bos taurus fibroblast growth factor ... 38 2.9
emb|X16455.1|HSCEAASP Human mRNA for carcinoembryonic antig... 38 2.9
ref|NM_079670.1| Drosophila melanogaster heartless (htl), mRNA 38 2.9
dbj|D14976.1|DROFGFR1 D.melanogaster mRNA for fibroblast gr... 38 2.9
gb|U70361.1|TMU70361 Tropheus moorii clone TMO unknown prot... 38 2.9
gb|U70358.1|OLU70358 Oreochromis leucostrictus clone TIL485... 38 2.9
gb|U70338.1|CLU70338 Cyprichromis leptosoma clone LT4.80 un... 38 2.9
gb|U70355.1|ASU70355 Abudefduf saxatilis clone B1.60 unknow... 38 2.9
gb|AF244066.1|AF244066 Pseudotylosurus angusticeps isolate ... 38 2.9
gb|AF244046.1|AF244046 Pseudotylosurus angusticeps isolate ... 38 2.9
gb|AF244045.1|AF244045 Pseudotylosurus angusticeps isolate ... 38 2.9
ref|NM_019329.1| Rattus norvegicus Plasmacytoma-associated ... 38 2.9
gb|U11031.1|RNU11031 Rattus norvegicus neural cell adhesion... 38 2.9
gb|AC008361.8|AC008361 Drosophila melanogaster, chromosome ... 37 3.8
gb|AE003765.2|AE003765 Drosophila melanogaster genomic scaf... 37 3.8
gb|U23839.1|DRU23839 Danio rerio fibroblast growth factor r... 37 3.8
ref|NM_002338.1| Homo sapiens limbic system-associated memb... 37 3.8
gb|U41901.1|HSU41901 Human limbic system-associated membran... 37 3.8
gb|AF040989.1|AF040989 Drosophila melanogaster roundabout 1... 37 3.8
emb|Y00813.1|GGCONTAC Chicken mRNA for contactin 37 3.8
ref|NM_079906.1| Drosophila melanogaster Papilin (Ppn), mRNA 37 3.8
gb|AC009213.5|AC009213 Drosophila melanogaster, chromosome ... 37 3.8
gb|AF205357.1|AF205357 Drosophila melanogaster extracellula... 37 3.8
gb|AF024638.1|AF024638 Mus musculus fibroblast growth facto... 37 3.8
emb|X93601.1|SAREGA1PT S.americana mRNA for REGA-1 protein 37 3.8
gb|U31554.1|RNU31554 Rattus norvegicus limbic system-associ... 37 3.8
gb|U70341.1|JRU70341 Julidochromis regani clone LT9.2.61 un... 37 3.8
gb|U70340.1|HSU70340 Haplochromis sp. clone LVH79.7 unknown... 37 3.8
gb|U70339.1|AAU70339 Astatoreochromis alluaudi clone LVAA1.... 37 3.8
gb|AY051812.1| Drosophila melanogaster LD32130 full length ... 37 3.8
ref|NM_002465.1| Homo sapiens myosin binding protein C, slo... 37 3.8
ref|NM_057551.1| Drosophila melanogaster roundabout (robo),... 37 3.8
emb|X73114.1|HSSMYBPC H.sapiens mRNA for slow MyBP-C 37 3.8
ref|NM_057118.1| Rattus norvegicus contactin 1 (Cntn1), mRNA 37 3.8
dbj|D38492.1|RATF3A Rat mRNA for neural adhesion molecule F... 37 3.8
emb|X14877.1|GGF11 Gallus gallus mRNA for neural cell recog... 37 3.8
ref|XM_003036.5| Homo sapiens limbic system-associated memb... 37 3.8
ref|XM_082187.1| heartless, mRNA 37 3.8
ref|XM_017524.4| Homo sapiens myosin binding protein C, slo... 37 3.8
gb|AF244065.1|AF244065 Strongylura senegalensis isolate N39... 37 3.8
gb|AF244064.1|AF244064 Strongylura senegalensis isolate N39... 37 3.8
gb|AF244027.1|AF244027 Platybelone argalus isolate N12b TMO... 37 3.8
gb|AF244021.1|AF244021 Parexocoetus brachypterus isolate N9... 37 3.8
gb|AF244020.1|AF244020 Parexocoetus brachypterus isolate N9... 37 3.8
gb|AF244015.1|AF244015 Strongylura timucu isolate N4b TMO-4... 37 3.8
ref|NM_007727.1| Mus musculus contactin 1 (Cntn1), mRNA 37 3.8
emb|X14943.1|MMF3 Mouse mRNA for neuronal cell surface prot... 37 3.8
gb|AC008362.5|AC008362 Drosophila melanogaster, chromosome ... 37 3.8
gb|AE003720.2|AE003720 Drosophila melanogaster genomic scaf... 37 3.8
ref|NM_008479.1| Mus musculus lymphocyte-activation gene 3 ... 37 5.0
gb|AF364048.1|AF364048 Gallus gallus Roundabout2 protein (R... 37 5.0
emb|X98113.1|MMLAG3 M.musculus mRNA for LAG-3-like cell sur... 37 5.0
gb|AF287911.1|AF287911 Mus musculus CEA-related cell adhesi... 37 5.0
gb|L19870.1|NVIKGFR Notophthalmus viridescens keratinocyte ... 37 5.0
gb|U70356.1|HBU70356 Hemichromis bimaculatus clone WAF38.15... 37 5.0
ref|XM_082643.1| bent, mRNA 37 5.0
gb|AF016687.1| Caenorhabditis elegans cosmid T21D12, comple... 37 5.0
emb|X67280.1|MMBGPE M.musculus Bgpe mRNA for biliary glycop... 37 5.0
gb|M34186.1|HUMFGF3H Human fibroblast growth factor recepto... 37 5.0
gb|AF244069.1|AF244069 Strongylura scapularis TMO-4C4 gene,... 37 5.0
gb|AF244050.1|AF244050 Strongylura hubbsi isolate N30b TMO-... 37 5.0
gb|AF244049.1|AF244049 Strongylura hubbsi isolate N30a TMO-... 37 5.0
gb|AF244048.1|AF244048 Strongylura fluviatilis isolate N29b... 37 5.0
gb|AF244047.1|AF244047 Strongylura fluviatilis isolate N29a... 37 5.0
gb|AF244014.1|AF244014 Strongylura timucu isolate N4a TMO-4... 37 5.0
emb|X74332.1|PWFGFR2 P.waltl mRNA for fibroblast growth fac... 37 5.0
emb|X67281.1|MMBGPF M.musculus Bgpf mRNA for biliary glycop... 37 5.0
ref|NM_067494.1| Caenorhabditis elegans 37 6.5
ref|XM_050674.2| Homo sapiens kinase insert domain receptor... 37 6.5
dbj|AB046788.1|AB046788 Homo sapiens mRNA for KIAA1568 prot... 37 6.5
gb|AC092242.1|AC092242 Drosophila melanogaster, chromosome ... 37 6.5
ref|NM_024146.1| Rattus norvegicus FGF receptor-1 (Fgfr1), ... 37 6.5
gb|AF244037.1|AF244037 Strongylura incisa isolate N20 TMO-4... 37 6.5
gb|U70331.1|SRU70331 Serranochromis robustus clone EAF27.37... 37 6.5
dbj|D12498.1|RATFGFR1 Rat mRNA for FGF receptor-1, complete... 37 6.5
ref|XM_081921.1| Papilin, mRNA 37 6.5
ref|NM_002253.1| Homo sapiens kinase insert domain receptor... 37 6.5
gb|AF035121.1|AF035121 Homo sapiens KDR/flk-1 protein mRNA,... 37 6.5
gb|S54008.1|S54008 fibroblast growth factor receptor 1 beta... 37 6.5
ref|NM_067495.1| Caenorhabditis elegans 37 6.5
gb|AE003577.2|AE003577 Drosophila melanogaster genomic scaf... 37 6.5
gb|AF157595.1|AF157595 Rattus norvegicus soluble FLT-1 mRNA... 37 6.5
gb|AF063658.1|AF063658 Homo sapiens vascular endothelial gr... 37 6.5
gb|AF244077.1|AF244077 Nomorhamphus ravnaki isolate N52b TM... 37 6.5
gb|AF244054.1|AF244054 Strongylura leiura isolate N32b TMO-... 37 6.5
gb|AF244053.1|AF244053 Strongylura leiura isolate N32a TMO-... 37 6.5
gb|AF244036.1|AF244036 Strongylura incisa isolate N19 TMO-4... 37 6.5
gb|AF244026.1|AF244026 Platybelone argalus isolate N12a TMO... 37 6.5
gb|AF244009.1|AF244009 Strongylura notata notata TMO-4C4 ge... 37 6.5
gb|AF244008.1|AF244008 Strongylura notata forsythia TMO-4C4... 37 6.5
emb|X61656.1|HSGFRTK H.sapiens mRNA for growth factor recep... 37 6.5
gb|L04947.1|HUMKDRZ Homo sapiens (clones BT3.081.8, BT3.129... 37 6.5
gb|AC005270.1|AC005270 Drosophila melanogaster DNA sequence... 37 6.5
ref|NM_004363.1| Homo sapiens carcinoembryonic antigen-rela... 36 8.5
gb|M29540.1|HUMCEAF Human carcinoembryonic antigen mRNA (CE... 36 8.5
ref|XM_012777.2| Homo sapiens carcinoembryonic antigen-rela... 36 8.5
gb|AF103900.1|AF103900 Manduca sexta fasciclin II transmemb... 36 8.5
gb|U70349.1|PTU70349 Pseudotropheus sp. 'Pseudotropheus tro... 36 8.5
gb|U70347.1|ACU70347 Astatotilapia calliptera clone EAF31.2... 36 8.5
emb|Z14119.1|RNPDGFRBE R.norvegicus mRNA for platelet-deriv... 36 8.5
gb|M15042.1|HUMCEA Human carcinoembryonic antigen mRNA 36 8.5
gb|U10986.1|XLU10986 Xenopus laevis deleted in colorectal c... 36 8.5
gb|AF244082.1|AF244082 Belonion apodion TMO-4C4 gene, parti... 36 8.5
gb|AF244079.1|AF244079 Dermogenys weberi isolate N53b TMO-4... 36 8.5
gb|AF244078.1|AF244078 Dermogenys weberi isolate N53a TMO-4... 36 8.5
gb|AF244073.1|AF244073 Zenarchopterus sp. CU-77844 isolate ... 36 8.5
gb|AF244072.1|AF244072 Zenarchopterus sp. CU-77844 isolate ... 36 8.5
gb|AF244044.1|AF244044 Potamorrhaphis petersi TMO-4C4 gene,... 36 8.5
gb|AF244043.1|AF244043 Xenentodon cancila isolate N26 TMO-4... 36 8.5
gb|AF244042.1|AF244042 Xenentodon cancila isolate N25 TMO-4... 36 8.5
gb|AF244035.1|AF244035 Potamorrhaphis eigenmanni isolate N1... 36 8.5
gb|AF244034.1|AF244034 Potamorrhaphis eigenmanni isolate N1... 36 8.5
gb|AF244031.1|AF244031 Belonion dibranchodon isolate N14b T... 36 8.5
gb|AF244030.1|AF244030 Belonion dibranchodon isolate N14a T... 36 8.5
gb|AF244029.1|AF244029 Potamorrhaphis guianensis isolate N1... 36 8.5
gb|AF244028.1|AF244028 Potamorrhaphis guianensis isolate N1... 36 8.5
emb|Z47070.1|CET09B9 Caenorhabditis elegans cosmid T09B9, c... 36 8.5
gb|M17303.1|HUMANTCE Human carcinoembryonic antigen gene, c... 36 8.5
gb|AF103899.1|AF103899 Manduca sexta fasciclin II GPI-linke... 36 8.5
>gb|M81846.1|CHKIL1REC Gallus gallus IL-1 receptor I mRNA, complete cds
Length = 1860
Score = 1039 bits (2686), Expect = 0.0
Identities = 510/555 (91%), Positives = 510/555 (91%)
Frame = +1
Query: 1 MHKMTSTFXXXXXXXXXXXXFSAEECVICNYFVLVGEPTAISCPVITLPMLHSDYNLTWY 60
MHKMTSTF FSAEECVICNYFVLVGEPTAISCPVITLPMLHSDYNLTWY
Sbjct: 175 MHKMTSTFLLIGHLILLIPLFSAEECVICNYFVLVGEPTAISCPVITLPMLHSDYNLTWY 354
Query: 61 RNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDN 120
RNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDN
Sbjct: 355 RNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDN 534
Query: 121 GLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAE 180
GLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAE
Sbjct: 535 GLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAE 714
Query: 181 GENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTI 240
GENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTI
Sbjct: 715 GENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTI 894
Query: 241 EVELGSHVVMECNVSSGVYGLLPYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFN 300
EVELGSHVVMECNVSSGVYGLLPYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFN
Sbjct: 895 EVELGSHVVMECNVSSGVYGLLPYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFN 1074
Query: 301 ISEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYK 360
ISEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPVQN VYK
Sbjct: 1075ISEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPVQNIRGYLIGGGISLIFLLFLILIVYK 1254
Query: 361 IFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLYPKNRESCLYSSDIFALKILPEVLERQ 420
IFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLYPKNRESCLYSSDIFALKILPEVLERQ
Sbjct: 1255IFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLYPKNRESCLYSSDIFALKILPEVLERQ 1434
Query: 421 CGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNAL 480
CGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNAL
Sbjct: 1435CGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNAL 1614
Query: 481 IQDGXXXXXXXXXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHM 540
IQDG DYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHM
Sbjct: 1615IQDGIKIILIELEKIEDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHM 1794
Query: 541 PSRKHGSSSGFHLSS 555
PSRKHGSSSGFHLSS
Sbjct: 1795PSRKHGSSSGFHLSS 1839
>ref|NM_000877.1| Homo sapiens interleukin 1 receptor, type I (IL1R1), mRNA
Length = 4910
Score = 409 bits (1050), Expect = e-112
Identities = 212/502 (42%), Positives = 300/502 (59%), Gaps = 3/502 (0%)
Frame = +2
Query: 57 LTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVF 116
+TWY++ S P++TE+ +RIHQ K LWF+PA +EDSG Y C VR+ + + I+ K
Sbjct: 245 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 424
Query: 117 KNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRL 176
+N+ LC+N + + Q + A G ++CP +E FK+E+N P++ WYK+CK L++ +
Sbjct: 425 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN--I 598
Query: 177 VLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPN 236
+ ++ ++++NV + +GNYTC YTY+GKQY ++R + E RP + P
Sbjct: 599 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA 778
Query: 237 NNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSG 296
N T+EV+LGS + + CNV+ G + YW+ N +D D E +Y P S
Sbjct: 779 NETMEVDLGSQIQLICNVT-GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRST 955
Query: 297 --TKFNISEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXX 354
T NISE++ + Y + F C +YI+L +PV N
Sbjct: 956 LITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVC 1135
Query: 355 XXXVYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLYPKN-RESCLYSSDIFALKIL 413
+YKIFKIDIVLWYR SC+ L K SDGK YDAY+LYPK E DIF K+L
Sbjct: 1136SVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVL 1315
Query: 414 PEVLERQCGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKH 473
PEVLE+QCGY LFI+GR+D GE +++V +E + +SRR+IIILV E S + L +SE+
Sbjct: 1316PEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQ 1495
Query: 474 LAVYNALIQDGXXXXXXXXXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFW 533
+A+YNAL+QDG DY MPESIK++KQK+GAIRW+GDF++ SA TRFW
Sbjct: 1496IAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFW 1675
Query: 534 KKVRYHMPSRKHGSSSGFHLSS 555
K VRYHMP ++ SS L S
Sbjct: 1676KNVRYHMPVQRRSPSSKHQLLS 1741
>gb|M27492.1|HUMIL1RA Human interleukin 1 receptor mRNA, complete cds
Length = 4910
Score = 409 bits (1050), Expect = e-112
Identities = 212/502 (42%), Positives = 300/502 (59%), Gaps = 3/502 (0%)
Frame = +2
Query: 57 LTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVF 116
+TWY++ S P++TE+ +RIHQ K LWF+PA +EDSG Y C VR+ + + I+ K
Sbjct: 245 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 424
Query: 117 KNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRL 176
+N+ LC+N + + Q + A G ++CP +E FK+E+N P++ WYK+CK L++ +
Sbjct: 425 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN--I 598
Query: 177 VLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPN 236
+ ++ ++++NV + +GNYTC YTY+GKQY ++R + E RP + P
Sbjct: 599 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA 778
Query: 237 NNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSG 296
N T+EV+LGS + + CNV+ G + YW+ N +D D E +Y P S
Sbjct: 779 NETMEVDLGSQIQLICNVT-GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRST 955
Query: 297 --TKFNISEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXX 354
T NISE++ + Y + F C +YI+L +PV N
Sbjct: 956 LITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVC 1135
Query: 355 XXXVYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLYPKN-RESCLYSSDIFALKIL 413
+YKIFKIDIVLWYR SC+ L K SDGK YDAY+LYPK E DIF K+L
Sbjct: 1136SVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVL 1315
Query: 414 PEVLERQCGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKH 473
PEVLE+QCGY LFI+GR+D GE +++V +E + +SRR+IIILV E S + L +SE+
Sbjct: 1316PEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQ 1495
Query: 474 LAVYNALIQDGXXXXXXXXXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFW 533
+A+YNAL+QDG DY MPESIK++KQK+GAIRW+GDF++ SA TRFW
Sbjct: 1496IAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFW 1675
Query: 534 KKVRYHMPSRKHGSSSGFHLSS 555
K VRYHMP ++ SS L S
Sbjct: 1676KNVRYHMPVQRRSPSSKHQLLS 1741
>ref|XM_002686.6| Homo sapiens interleukin 1 receptor, type I (IL1R1), mRNA
Length = 5177
Score = 409 bits (1050), Expect = e-112
Identities = 212/502 (42%), Positives = 300/502 (59%), Gaps = 3/502 (0%)
Frame = +2
Query: 57 LTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVF 116
+TWY++ S P++TE+ +RIHQ K LWF+PA +EDSG Y C VR+ + + I+ K
Sbjct: 515 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 694
Query: 117 KNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRL 176
+N+ LC+N + + Q + A G ++CP +E FK+E+N P++ WYK+CK L++ +
Sbjct: 695 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN--I 868
Query: 177 VLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPN 236
+ ++ ++++NV + +GNYTC YTY+GKQY ++R + E RP + P
Sbjct: 869 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA 1048
Query: 237 NNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSG 296
N T+EV+LGS + + CNV+ G + YW+ N +D D E +Y P S
Sbjct: 1049 NETMEVDLGSQIQLICNVT-GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRST 1225
Query: 297 --TKFNISEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXX 354
T NISE++ + Y + F C +YI+L +PV N
Sbjct: 1226 LITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVC 1405
Query: 355 XXXVYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLYPKN-RESCLYSSDIFALKIL 413
+YKIFKIDIVLWYR SC+ L K SDGK YDAY+LYPK E DIF K+L
Sbjct: 1406 SVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVL 1585
Query: 414 PEVLERQCGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKH 473
PEVLE+QCGY LFI+GR+D GE +++V +E + +SRR+IIILV E S + L +SE+
Sbjct: 1586 PEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQ 1765
Query: 474 LAVYNALIQDGXXXXXXXXXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFW 533
+A+YNAL+QDG DY MPESIK++KQK+GAIRW+GDF++ SA TRFW
Sbjct: 1766 IAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFW 1945
Query: 534 KKVRYHMPSRKHGSSSGFHLSS 555
K VRYHMP ++ SS L S
Sbjct: 1946 KNVRYHMPVQRRSPSSKHQLLS 2011
>emb|X16896.1|HSIL1RFT Human mRNA for interleukin-1 receptor (fibroblast type)
Length = 2156
Score = 409 bits (1050), Expect = e-112
Identities = 212/502 (42%), Positives = 300/502 (59%), Gaps = 3/502 (0%)
Frame = +3
Query: 57 LTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVF 116
+TWY++ S P++TE+ +RIHQ K LWF+PA +EDSG Y C VR+ + + I+ K
Sbjct: 471 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 650
Query: 117 KNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRL 176
+N+ LC+N + + Q + A G ++CP +E FK+E+N P++ WYK+CK L++ +
Sbjct: 651 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN--I 824
Query: 177 VLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPN 236
+ ++ ++++NV + +GNYTC YTY+GKQY ++R + E RP + P
Sbjct: 825 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA 1004
Query: 237 NNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSG 296
N T+EV+LGS + + CNV+ G + YW+ N +D D E +Y P S
Sbjct: 1005NETMEVDLGSQIQLICNVT-GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRST 1181
Query: 297 --TKFNISEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXX 354
T NISE++ + Y + F C +YI+L +PV N
Sbjct: 1182LITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVC 1361
Query: 355 XXXVYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLYPKN-RESCLYSSDIFALKIL 413
+YKIFKIDIVLWYR SC+ L K SDGK YDAY+LYPK E DIF K+L
Sbjct: 1362SVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVL 1541
Query: 414 PEVLERQCGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKH 473
PEVLE+QCGY LFI+GR+D GE +++V +E + +SRR+IIILV E S + L +SE+
Sbjct: 1542PEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQ 1721
Query: 474 LAVYNALIQDGXXXXXXXXXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFW 533
+A+YNAL+QDG DY MPESIK++KQK+GAIRW+GDF++ SA TRFW
Sbjct: 1722IAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFW 1901
Query: 534 KKVRYHMPSRKHGSSSGFHLSS 555
K VRYHMP ++ SS L S
Sbjct: 1902KNVRYHMPVQRRSPSSKHQLLS 1967
>gb|M95578.1|RATIL1R Rattus notvegicus Sprague-Dawley interleukin-1 receptor type I
mRNA, complete cds
Length = 2187
Score = 393 bits (1009), Expect = e-107
Identities = 212/525 (40%), Positives = 299/525 (56%), Gaps = 3/525 (0%)
Frame = +1
Query: 32 FVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALE 91
F V E SCP +T +H + WY+N S PI+ ++ +RIHQ+ LWF+PA +E
Sbjct: 466 FSSVNEIDIRSCP-LTPNEMHGG-TIIWYKNDSKTPISADKDSRIHQQNEHLWFVPAKME 639
Query: 92 DSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFK 151
DSG Y C +R+ + I + V +ND GLC+N + + Q + A G ++CP L+ FK
Sbjct: 640 DSGYYYCIMRNSTYCLKTKITMSVLENDPGLCYNTQASFIQRLHVAGDGSLVCPYLDFFK 819
Query: 152 DEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQY 211
DE+N P++ WYK CK L+D +N ++++NV + +GNYTCR YTY GKQY
Sbjct: 820 DENNELPKVQWYKNCKPLPLDDGNFF--GFKNKLMVMNVAEEHRGNYTCRTSYTYQGKQY 993
Query: 212 NVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDED 271
V+R + + + RP + P N T+E + GS + + CNV+ G + L YW+ N +
Sbjct: 994 PVTRVITFITIDDSKRDRPVIMSPRNETMEADPGSTIQLICNVT-GQFTDLVYWKWNGSE 1170
Query: 272 VDSFDSTYRE--QFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHFIYDSQEFTSYIK 329
++ D E QF E T N+SEVK + Y Y F C T++++
Sbjct: 1171IEWDDPILAEDYQFLEHPSAKRKYTLITTLNVSEVKSQFYRYPFICFVKNTHILETAHVR 1350
Query: 330 LEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYD 389
L +PV + +YK+FK+DIVLWYR SC L +K SDG+ YD
Sbjct: 1351LVYPVPDFKNYLIGGFAIFTATAVFCACIYKVFKVDIVLWYRDSCSDFLPRKASDGRTYD 1530
Query: 390 AYVLYPKNR-ESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLAGEAVIDVTDEKIHQ 448
AYVLYPK E D F K+LPEVLE Q GY LFI GR+D GE I+VT+E + +
Sbjct: 1531AYVLYPKTYGEGSFAYLDTFVFKLLPEVLEGQFGYKLFICGRDDYVGEDTIEVTNENVKR 1710
Query: 449 SRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXXXXDYANMPESIKYV 508
SRR+IIILV + + L +SE+ +A+Y+ALI++G DY MPESI+++
Sbjct: 1711SRRLIIILVRDMGSFSCLGQSSEEQIAIYDALIREGIKIILLELEKIQDYEKMPESIQFI 1890
Query: 509 KQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRKHGSSSGFHL 553
KQK+GAI W+GDF ER SA TRFWK +RY MP+++ S HL
Sbjct: 1891KQKHGAICWSGDFKERPQSAKTRFWKNLRYQMPAQRRSPLSKHHL 2025
>ref|NM_008362.1| Mus musculus interleukin 1 receptor, type I (Il1r1), mRNA
Length = 4740
Score = 384 bits (987), Expect = e-104
Identities = 209/525 (39%), Positives = 298/525 (55%), Gaps = 3/525 (0%)
Frame = +3
Query: 32 FVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALE 91
F+ V E CP +T +H D + WY+N S PI+ +R +RIHQ+ LWF+PA +E
Sbjct: 327 FLSVNEIDIRKCP-LTPNKMHGD-TIIWYKNDSKTPISADRDSRIHQQNEHLWFVPAKVE 500
Query: 92 DSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFK 151
DSG Y C VR+ + + + V +ND GLC++ + + Q + A G ++CP + FK
Sbjct: 501 DSGYYYCIVRNSTYCLKTKVTVTVLENDPGLCYSTQATFPQRLHIAGDGSLVCPYVSYFK 680
Query: 152 DEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQY 211
DE+N PE+ WYK CK L++ + + +L+ NV + +G+Y CRM YT+ GKQY
Sbjct: 681 DENNELPEVQWYKNCKPLLLDNVSFFGVKDK--LLVRNVAEEHRGDYICRMSYTFRGKQY 854
Query: 212 NVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDED 271
V+R + + + RP + P N TIE + GS + + CNV+ G + L YW+ N +
Sbjct: 855 PVTRVIQFITIDENKRDRPVILSPRNETIEADPGSMIQLICNVT-GQFSDLVYWKWNGSE 1031
Query: 272 VDSFDSTYRE--QFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHFIYDSQEFTSYIK 329
++ D E QF E T NISEVK + Y Y F C + +++++
Sbjct: 1032IEWNDPFLAEDYQFVEHPSTKRKYTLITTLNISEVKSQFYRYPFICVVKNTNIFESAHVQ 1211
Query: 330 LEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYD 389
L +PV + +YK+FK+DIVLWYR SC L K SDGK YD
Sbjct: 1212LIYPVPDFKNYLIGGFIILTATIVCCVCIYKVFKVDIVLWYRDSCSGFLPSKASDGKTYD 1391
Query: 390 AYVLYPKNRESCLYSS-DIFALKILPEVLERQCGYNLFIFGRNDLAGEAVIDVTDEKIHQ 448
AY+LYPK +S D F K+LPEVLE Q GY LFI+GR+D GE I+VT+E + +
Sbjct: 1392AYILYPKTLGEGSFSDLDTFVFKLLPEVLEGQFGYKLFIYGRDDYVGEDTIEVTNENVKK 1571
Query: 449 SRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXXXXDYANMPESIKYV 508
SRR+IIILV + + L +SE+ +A+YNALIQ+G DY MP+SI+++
Sbjct: 1572SRRLIIILVRDMGGFSWLGQSSEEQIAIYNALIQEGIKIVLLELEKIQDYEKMPDSIQFI 1751
Query: 509 KQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRKHGSSSGFHL 553
KQK+G I W+GDF ER SA TRFWK +RY MP+++ S L
Sbjct: 1752KQKHGVICWSGDFQERPQSAKTRFWKNLRYQMPAQRRSPLSKHRL 1886
>gb|M20658.1|MUSIL1TCR Mouse interleukin-1 receptor mRNA, complete cds
Length = 4740
Score = 384 bits (987), Expect = e-104
Identities = 209/525 (39%), Positives = 298/525 (55%), Gaps = 3/525 (0%)
Frame = +3
Query: 32 FVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALE 91
F+ V E CP +T +H D + WY+N S PI+ +R +RIHQ+ LWF+PA +E
Sbjct: 327 FLSVNEIDIRKCP-LTPNKMHGD-TIIWYKNDSKTPISADRDSRIHQQNEHLWFVPAKVE 500
Query: 92 DSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFK 151
DSG Y C VR+ + + + V +ND GLC++ + + Q + A G ++CP + FK
Sbjct: 501 DSGYYYCIVRNSTYCLKTKVTVTVLENDPGLCYSTQATFPQRLHIAGDGSLVCPYVSYFK 680
Query: 152 DEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQY 211
DE+N PE+ WYK CK L++ + + +L+ NV + +G+Y CRM YT+ GKQY
Sbjct: 681 DENNELPEVQWYKNCKPLLLDNVSFFGVKDK--LLVRNVAEEHRGDYICRMSYTFRGKQY 854
Query: 212 NVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDED 271
V+R + + + RP + P N TIE + GS + + CNV+ G + L YW+ N +
Sbjct: 855 PVTRVIQFITIDENKRDRPVILSPRNETIEADPGSMIQLICNVT-GQFSDLVYWKWNGSE 1031
Query: 272 VDSFDSTYRE--QFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHFIYDSQEFTSYIK 329
++ D E QF E T NISEVK + Y Y F C + +++++
Sbjct: 1032IEWNDPFLAEDYQFVEHPSTKRKYTLITTLNISEVKSQFYRYPFICVVKNTNIFESAHVQ 1211
Query: 330 LEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYD 389
L +PV + +YK+FK+DIVLWYR SC L K SDGK YD
Sbjct: 1212LIYPVPDFKNYLIGGFIILTATIVCCVCIYKVFKVDIVLWYRDSCSGFLPSKASDGKTYD 1391
Query: 390 AYVLYPKNRESCLYSS-DIFALKILPEVLERQCGYNLFIFGRNDLAGEAVIDVTDEKIHQ 448
AY+LYPK +S D F K+LPEVLE Q GY LFI+GR+D GE I+VT+E + +
Sbjct: 1392AYILYPKTLGEGSFSDLDTFVFKLLPEVLEGQFGYKLFIYGRDDYVGEDTIEVTNENVKK 1571
Query: 449 SRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXXXXDYANMPESIKYV 508
SRR+IIILV + + L +SE+ +A+YNALIQ+G DY MP+SI+++
Sbjct: 1572SRRLIIILVRDMGGFSWLGQSSEEQIAIYNALIQEGIKIVLLELEKIQDYEKMPDSIQFI 1751
Query: 509 KQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRKHGSSSGFHL 553
KQK+G I W+GDF ER SA TRFWK +RY MP+++ S L
Sbjct: 1752KQKHGVICWSGDFQERPQSAKTRFWKNLRYQMPAQRRSPLSKHRL 1886
>dbj|AB020338.1|AB020338 Equus caballus mRNA for interleukin-1 receptor type I, complete cds
Length = 3090
Score = 383 bits (984), Expect = e-104
Identities = 207/520 (39%), Positives = 297/520 (56%), Gaps = 6/520 (1%)
Frame = +1
Query: 42 SCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVR 101
SCP L S+ + WY+N S P++ ER +RIHQ K LWF+PA +EDSG Y C VR
Sbjct: 523 SCP---LNPNESNGTIIWYKNDSETPVSMERDSRIHQYKDKLWFVPAKIEDSGHYYCAVR 693
Query: 102 SLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIH 161
+ + I + +++ LC+N + + Q + G ++CP LE F+DE+N P+I
Sbjct: 694 NSTYCLKVKITARFVQHEPDLCYNAQAIFTQKLPLGEDGLLVCPYLEVFRDENNELPKIQ 873
Query: 162 WYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEV 221
WYK+C+ L++ + + +++ NVT KG+YTC + YT++GKQY ++R + L
Sbjct: 874 WYKDCQPLLLDNINFI--GKTDKLIVANVTEAHKGHYTCHISYTHLGKQYPITRVIGLIT 1047
Query: 222 KESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVDSFDSTYRE 281
+ +P + P N T+EV+LGS V + CNV+ G++ YW+ N +D D E
Sbjct: 1048 LDEIRPTKPLIVSPVNETMEVDLGSQVQLICNVT-GMFTDFVYWRWNGSLIDDSDPVLVE 1224
Query: 282 QFYEEGMP-----HGIAVSGTKFNISEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPVQN 336
++ P H + T NIS V+ + Y Y F C +Y++L PV +
Sbjct: 1225 EYKPVENPSLKRRHTLI---TVLNISAVESRFYLYPFTCLAKNSYGRSAAYVQLRQPVPD 1395
Query: 337 XXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLYPK 396
+YK+FK+D+VLWYR SC+ K SDGK YDAY+LYPK
Sbjct: 1396 FQKHVIGIFVLLTVAITCSVFIYKLFKVDLVLWYRDSCYDFRSPKASDGKTYDAYILYPK 1575
Query: 397 NR-ESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIII 455
E +SDIF K+LPEVLE+QCGY LFI+GR+D GE +++VT+E I +SRR+III
Sbjct: 1576 ILGEGSTSNSDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVTNENIKKSRRLIII 1755
Query: 456 LVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXXXXDYANMPESIKYVKQKYGAI 515
LV E S L +SE+ +A+YNAL+QDG DY MPESIK++K+K+GA+
Sbjct: 1756 LVRETSGLSWLGSSSEEQIAMYNALVQDGIKIILLELEKIQDYEKMPESIKFIKRKHGAL 1935
Query: 516 RWTGDFSERSHSASTRFWKKVRYHMPSRKHGSSSGFHLSS 555
RW+GD + SA RFWK VRY MP ++ SS L S
Sbjct: 1936 RWSGDSRKGPQSAKARFWKNVRYRMPVQRQLPSSKCQLLS 2055
>gb|U49066.1|RNU49066 Rattus norvegicus interleukin-1 receptor-related protein mRNA,
complete cds
Length = 2044
Score = 341 bits (874), Expect = 1e-91
Identities = 190/527 (36%), Positives = 289/527 (54%), Gaps = 14/527 (2%)
Frame = +2
Query: 36 GEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGL 95
G+P +C P+ + NLTW+R S PI+ R RIHQ + + F+P ALEDSG+
Sbjct: 197 GQPFPFNCTYP--PVTNGAVNLTWHRTPSKSPISINRHVRIHQDQSWILFLPLALEDSGI 370
Query: 96 YECEVRSLNRSKQKIINLKVFK------NDNGLCFNGEMKYDQIVKSANAGKIICPDLEN 149
Y+C ++ + + INL VF+ ++ N +Y Q + +G + C
Sbjct: 371 YQCVIKDAHSCYRIAINLTVFRKHWCDSSNEESSINSSDEYQQWLPIGKSGSLTC---HL 541
Query: 150 FKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGK 209
+ E + I WYK C+ + K +L+ N+ ++D G+Y C T++G+
Sbjct: 542 YFPESCVLDSIKWYKGCEEIKVSKK---FCPTGTKLLVNNIDVEDSGSYACSARLTHLGR 712
Query: 210 QYNVSRTMNLEVKESPLKMR-PEFIYPNNNTIEVELGSHVVMECNVSSGVYGL-LPYWQV 267
+ V + + KE R P YP NN+IEV+LGS ++++CN++ L W+V
Sbjct: 713 IFTVRNYIAVNTKEVGSGGRIPNITYPKNNSIEVQLGSTLIVDCNITDTKENTNLRCWRV 892
Query: 268 NDEDVDSFDSTYREQFYEEGMPHGIAVSG-----TKFNISEVKLKDYAYKFFCHFIYDSQ 322
N+ VD + + ++ +EG+ +++ EVK++DY + F CH +
Sbjct: 893 NNTLVDDYYNDFKR--IQEGIETNLSLRNHILYTVNITFLEVKMEDYGHPFTCHAAVSA- 1063
Query: 323 EFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKV 382
+YI L+ P + +Y FK+DIVLWYRS+ H +
Sbjct: 1064---AYIILKRPAPDFRAYLIGGLMAFLLLAVSILYIYNTFKVDIVLWYRSTFHT--AQAP 1228
Query: 383 SDGKIYDAYVLYPKN-RESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLAGEAVIDV 441
D K+YDAYVLYPK RES + D LKILPEVLE+QCGY LFIFGR++ G+AV V
Sbjct: 1229DDEKLYDAYVLYPKYPRESQGHDVDTLVLKILPEVLEKQCGYKLFIFGRDEFPGQAVASV 1408
Query: 442 TDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXXXXDYANM 501
DE I RR+++++ PE S + L++ +E+ +AVYNAL+QDG DY+ M
Sbjct: 1409IDENIKLCRRLMVLVAPETSSFSFLKNLTEEQIAVYNALVQDGMKVILIELERVKDYSTM 1588
Query: 502 PESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRKHGSS 548
PESI+Y++QK+GAI+W GDF+E++ A T+FWKKVRYHMP R++ +S
Sbjct: 1589PESIQYIRQKHGAIQWDGDFTEQAQCAKTKFWKKVRYHMPPRRYPAS 1729
>gb|AF284433.1|AF284433 Mus musculus IL-1Rrp2 mRNA, complete cds
Length = 1955
Score = 337 bits (865), Expect = 1e-90
Identities = 197/546 (36%), Positives = 290/546 (53%), Gaps = 14/546 (2%)
Frame = +1
Query: 22 SAEECVICNYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKG 81
+ E+ + N + G+P +C P + NLTWY+ S P++ R R+HQ +
Sbjct: 271 TCEDIFMHNVIISEGQPFPFNCTYP--PETNGAVNLTWYKTPSKSPVSNNRHLRVHQDQT 444
Query: 82 LLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKND------NGLCFNGEMKYDQIVK 135
+ F+P LEDSG+Y+C +R+ + Q +NL V KN G N Y QI+
Sbjct: 445 WILFLPLTLEDSGIYQCVIRNAHNCYQIAVNLTVLKNHWCDSSMEGSPVNSPDVYQQILP 624
Query: 136 SANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDK 195
+G + C + E I WYK C+ ++ + G +L+ NV ++D
Sbjct: 625 IGKSGSLNC---HLYFPESCALDSIKWYKGCEE--IKAGKKYSPSGAK-LLVNNVAVEDG 786
Query: 196 GNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMR-PEFIYPNNNTIEVELGSHVVMECNV 254
G+Y C T++G+ + + + + KE R P YP NN+IEV LGS +++ CN+
Sbjct: 787 GSYACSARLTHLGRHFTIRNYIAVNTKEVEYGRRIPNITYPKNNSIEVPLGSTLIVNCNI 966
Query: 255 SSGVYGL-LPYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSG-----TKFNISEVKLKD 308
+ L W+VN+ VD + + +EG+ +++ +VK++D
Sbjct: 967 TDTKENTNLRCWRVNNTLVDDYYKDSKR--IQEGIETNVSLRDQIRYTVNITFLKVKMED 1140
Query: 309 YAYKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVL 368
Y F CH + +YI L +PV + +Y FKIDI+L
Sbjct: 1141YGRPFTCH----AGVSAAYIILIYPVPDFRAYLLGGLMAFLLLVVSVLFIYNSFKIDIML 1308
Query: 369 WYRSSCHPLLGKKVSDGKIYDAYVLYPKN-RESCLYSSDIFALKILPEVLERQCGYNLFI 427
WYRS+ H + D K+YDAYVLYPK R S + D LKILPEVLE+QCGY LFI
Sbjct: 1309WYRSAFHT--AQAPDDEKLYDAYVLYPKYPRGSQGHDVDTLVLKILPEVLEKQCGYKLFI 1482
Query: 428 FGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXX 487
FGR++ G+AV V DE I RR+++ + PE S +G L++ SE+ +AVYNALIQ G
Sbjct: 1483FGRDEFPGQAVASVIDENIKLCRRLMVFVAPESSSFGFLKNLSEEQIAVYNALIQHGMKV 1662
Query: 488 XXXXXXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRKHGS 547
DY+ MPESI+Y++QK+GAI+W GDF+E+S A T+FWKKVRYHMP R++ +
Sbjct: 1663ILIELEKVKDYSTMPESIQYIRQKHGAIQWDGDFTEQSQCAKTKFWKKVRYHMPPRRYPA 1842
Query: 548 SSGFHL 553
SS L
Sbjct: 1843SSPVQL 1860
>gb|AF284434.1|AF284434 Homo sapiens IL-1Rrp2 mRNA, complete cds
Length = 1972
Score = 337 bits (863), Expect = 2e-90
Identities = 198/530 (37%), Positives = 298/530 (55%), Gaps = 15/530 (2%)
Frame = +3
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N + +P A +C P+ + ++TWY+N S +P++ ++RIHQ + + F+P
Sbjct: 219 NEILSASQPFAFNCTFP--PITSGEVSVTWYKNSSKIPVSKIIQSRIHQDETWILFLPME 392
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKN-----DNGLCFNGEMKYDQIVKSANAGKIIC 144
DSG+Y+C ++ + + +NL VF+ G N +Y QI+ + C
Sbjct: 393 WGDSGVYQCVIKGRDSCHRIHVNLTVFEKHWCDTSIGGLPNLSDEYKQILHLGKDDSLTC 572
Query: 145 PDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVY 204
+F + P I WYK+C ++ +R + E +L+ NV+ +D+GNY C+ +
Sbjct: 573 H--LHFPKSCVLGP-IKWYKDCNE--IKGERFTVLE--TRLLVSNVSAEDRGNYACQAIL 731
Query: 205 TYMGKQYNVSRTMNLEVKESPLK--MRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGL- 261
T+ GKQY V + + + E P+ IYP N++IEV+LG+ ++++CNV+
Sbjct: 732 THSGKQYEVLNGITVSITERAGYGGSVPKIIYPKNHSIEVQLGTTLIVDCNVTDTKDNTN 911
Query: 262 LPYWQVNDEDVDSF-DSTYREQFYEEGMPHGIA-----VSGTKFNISEVKLKDYAYKFFC 315
L W+VN+ VD + D + R EG+ ++ + EVK++DY F C
Sbjct: 912 LRCWRVNNTLVDDYYDESKR---IREGVETHVSFREHNLYTVNITFLEVKMEDYGLPFMC 1082
Query: 316 HFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCH 375
H + T+YI L+ P + +Y IFKIDIVLWYRS+ H
Sbjct: 1083H----AGVSTAYIILQLPAPDFRAYLIGGLIALVAVAVSVVYIYNIFKIDIVLWYRSAFH 1250
Query: 376 PLLGKKVSDGKIYDAYVLYPK-NRESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLA 434
+ + DGK+YDAYVLYPK ++ES ++ D L ILPEVLERQCGY LFIFGR++
Sbjct: 1251ST--ETIVDGKLYDAYVLYPKPHKESQRHAVDALVLNILPEVLERQCGYKLFIFGRDEFP 1424
Query: 435 GEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXX 494
G+AV +V DE + RR+I+I+VPE +G+L++ SE+ +AVY+ALIQDG
Sbjct: 1425GQAVANVIDENVKLCRRLIVIVVPESLGFGLLKNLSEEQIAVYSALIQDGMKVILVELEK 1604
Query: 495 XXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRK 544
DY MPESI+Y+KQK+GAIRW GDF+E+S T+FWK VRYHMP R+
Sbjct: 1605IEDYTVMPESIQYIKQKHGAIRWHGDFTEQSQCMKTKFWKTVRYHMPPRR 1754
>ref|NM_003854.1| Homo sapiens interleukin 1 receptor-like 2 (IL1RL2), mRNA
Length = 1971
Score = 337 bits (863), Expect = 2e-90
Identities = 198/530 (37%), Positives = 298/530 (55%), Gaps = 15/530 (2%)
Frame = +3
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N + +P A +C P+ + ++TWY+N S +P++ ++RIHQ + + F+P
Sbjct: 219 NEILSASQPFAFNCTFP--PITSGEVSVTWYKNSSKIPVSKIIQSRIHQDETWILFLPME 392
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKN-----DNGLCFNGEMKYDQIVKSANAGKIIC 144
DSG+Y+C ++ + + +NL VF+ G N +Y QI+ + C
Sbjct: 393 WGDSGVYQCVIKGRDSCHRIHVNLTVFEKHWCDTSIGGLPNLSDEYKQILHLGKDDSLTC 572
Query: 145 PDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVY 204
+F + P I WYK+C ++ +R + E +L+ NV+ +D+GNY C+ +
Sbjct: 573 H--LHFPKSCVLGP-IKWYKDCNE--IKGERFTVLE--TRLLVSNVSAEDRGNYACQAIL 731
Query: 205 TYMGKQYNVSRTMNLEVKESPLK--MRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGL- 261
T+ GKQY V + + + E P+ IYP N++IEV+LG+ ++++CNV+
Sbjct: 732 THSGKQYEVLNGITVSITERAGYGGSVPKIIYPKNHSIEVQLGTTLIVDCNVTDTKDNTN 911
Query: 262 LPYWQVNDEDVDSF-DSTYREQFYEEGMPHGIA-----VSGTKFNISEVKLKDYAYKFFC 315
L W+VN+ VD + D + R EG+ ++ + EVK++DY F C
Sbjct: 912 LRCWRVNNTLVDDYYDESKR---IREGVETHVSFREHNLYTVNITFLEVKMEDYGLPFMC 1082
Query: 316 HFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCH 375
H + T+YI L+ P + +Y IFKIDIVLWYRS+ H
Sbjct: 1083H----AGVSTAYIILQLPAPDFRAYLIGGLIALVAVAVSVVYIYNIFKIDIVLWYRSAFH 1250
Query: 376 PLLGKKVSDGKIYDAYVLYPK-NRESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLA 434
+ + DGK+YDAYVLYPK ++ES ++ D L ILPEVLERQCGY LFIFGR++
Sbjct: 1251ST--ETIVDGKLYDAYVLYPKPHKESQRHAVDALVLNILPEVLERQCGYKLFIFGRDEFP 1424
Query: 435 GEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXX 494
G+AV +V DE + RR+I+I+VPE +G+L++ SE+ +AVY+ALIQDG
Sbjct: 1425GQAVANVIDENVKLCRRLIVIVVPESLGFGLLKNLSEEQIAVYSALIQDGMKVILIELEK 1604
Query: 495 XXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRK 544
DY MPESI+Y+KQK+GAIRW GDF+E+S T+FWK VRYHMP R+
Sbjct: 1605IEDYTVMPESIQYIKQKHGAIRWHGDFTEQSQCMKTKFWKTVRYHMPPRR 1754
>gb|U49065.1|HSU49065 Human interleukin-1 receptor-related protein mRNA, complete cds
Length = 1971
Score = 337 bits (863), Expect = 2e-90
Identities = 198/530 (37%), Positives = 298/530 (55%), Gaps = 15/530 (2%)
Frame = +3
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N + +P A +C P+ + ++TWY+N S +P++ ++RIHQ + + F+P
Sbjct: 219 NEILSASQPFAFNCTFP--PITSGEVSVTWYKNSSKIPVSKIIQSRIHQDETWILFLPME 392
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKN-----DNGLCFNGEMKYDQIVKSANAGKIIC 144
DSG+Y+C ++ + + +NL VF+ G N +Y QI+ + C
Sbjct: 393 WGDSGVYQCVIKGRDSCHRIHVNLTVFEKHWCDTSIGGLPNLSDEYKQILHLGKDDSLTC 572
Query: 145 PDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVY 204
+F + P I WYK+C ++ +R + E +L+ NV+ +D+GNY C+ +
Sbjct: 573 H--LHFPKSCVLGP-IKWYKDCNE--IKGERFTVLE--TRLLVSNVSAEDRGNYACQAIL 731
Query: 205 TYMGKQYNVSRTMNLEVKESPLK--MRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGL- 261
T+ GKQY V + + + E P+ IYP N++IEV+LG+ ++++CNV+
Sbjct: 732 THSGKQYEVLNGITVSITERAGYGGSVPKIIYPKNHSIEVQLGTTLIVDCNVTDTKDNTN 911
Query: 262 LPYWQVNDEDVDSF-DSTYREQFYEEGMPHGIA-----VSGTKFNISEVKLKDYAYKFFC 315
L W+VN+ VD + D + R EG+ ++ + EVK++DY F C
Sbjct: 912 LRCWRVNNTLVDDYYDESKR---IREGVETHVSFREHNLYTVNITFLEVKMEDYGLPFMC 1082
Query: 316 HFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCH 375
H + T+YI L+ P + +Y IFKIDIVLWYRS+ H
Sbjct: 1083H----AGVSTAYIILQLPAPDFRAYLIGGLIALVAVAVSVVYIYNIFKIDIVLWYRSAFH 1250
Query: 376 PLLGKKVSDGKIYDAYVLYPK-NRESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLA 434
+ + DGK+YDAYVLYPK ++ES ++ D L ILPEVLERQCGY LFIFGR++
Sbjct: 1251ST--ETIVDGKLYDAYVLYPKPHKESQRHAVDALVLNILPEVLERQCGYKLFIFGRDEFP 1424
Query: 435 GEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXX 494
G+AV +V DE + RR+I+I+VPE +G+L++ SE+ +AVY+ALIQDG
Sbjct: 1425GQAVANVIDENVKLCRRLIVIVVPESLGFGLLKNLSEEQIAVYSALIQDGMKVILIELEK 1604
Query: 495 XXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRK 544
DY MPESI+Y+KQK+GAIRW GDF+E+S T+FWK VRYHMP R+
Sbjct: 1605IEDYTVMPESIQYIKQKHGAIRWHGDFTEQSQCMKTKFWKTVRYHMPPRR 1754
>ref|XM_002685.2| Homo sapiens interleukin 1 receptor-like 2 (IL1RL2), mRNA
Length = 1964
Score = 337 bits (863), Expect = 2e-90
Identities = 198/530 (37%), Positives = 298/530 (55%), Gaps = 15/530 (2%)
Frame = +1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N + +P A +C P+ + ++TWY+N S +P++ ++RIHQ + + F+P
Sbjct: 211 NEILSASQPFAFNCTFP--PITSGEVSVTWYKNSSKIPVSKIIQSRIHQDETWILFLPME 384
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKN-----DNGLCFNGEMKYDQIVKSANAGKIIC 144
DSG+Y+C ++ + + +NL VF+ G N +Y QI+ + C
Sbjct: 385 WGDSGVYQCVIKGRDSCHRIHVNLTVFEKHWCDTSIGGLPNLSDEYKQILHLGKDDSLTC 564
Query: 145 PDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVY 204
+F + P I WYK+C ++ +R + E +L+ NV+ +D+GNY C+ +
Sbjct: 565 H--LHFPKSCVLGP-IKWYKDCNE--IKGERFTVLE--TRLLVSNVSAEDRGNYACQAIL 723
Query: 205 TYMGKQYNVSRTMNLEVKESPLK--MRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGL- 261
T+ GKQY V + + + E P+ IYP N++IEV+LG+ ++++CNV+
Sbjct: 724 THSGKQYEVLNGITVSITERAGYGGSVPKIIYPKNHSIEVQLGTTLIVDCNVTDTKDNTN 903
Query: 262 LPYWQVNDEDVDSF-DSTYREQFYEEGMPHGIA-----VSGTKFNISEVKLKDYAYKFFC 315
L W+VN+ VD + D + R EG+ ++ + EVK++DY F C
Sbjct: 904 LRCWRVNNTLVDDYYDESKR---IREGVETHVSFREHNLYTVNITFLEVKMEDYGLPFMC 1074
Query: 316 HFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCH 375
H + T+YI L+ P + +Y IFKIDIVLWYRS+ H
Sbjct: 1075H----AGVSTAYIILQLPAPDFRAYLIGGLIALVAVAVSVVYIYNIFKIDIVLWYRSAFH 1242
Query: 376 PLLGKKVSDGKIYDAYVLYPK-NRESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLA 434
+ + DGK+YDAYVLYPK ++ES ++ D L ILPEVLERQCGY LFIFGR++
Sbjct: 1243ST--ETIVDGKLYDAYVLYPKPHKESQRHAVDALVLNILPEVLERQCGYKLFIFGRDEFP 1416
Query: 435 GEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXX 494
G+AV +V DE + RR+I+I+VPE +G+L++ SE+ +AVY+ALIQDG
Sbjct: 1417GQAVANVIDENVKLCRRLIVIVVPESLGFGLLKNLSEEQIAVYSALIQDGMKVILIELEK 1596
Query: 495 XXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRK 544
DY MPESI+Y+KQK+GAIRW GDF+E+S T+FWK VRYHMP R+
Sbjct: 1597IEDYTVMPESIQYIKQKHGAIRWHGDFTEQSQCMKTKFWKTVRYHMPPRR 1746
>dbj|AB041738.2|AB041738 Gallus gallus mRNA for ST2L, complete cds
Length = 2971
Score = 227 bits (579), Expect = 2e-57
Identities = 156/531 (29%), Positives = 255/531 (47%), Gaps = 11/531 (2%)
Frame = +2
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERR-ARIHQRKGLLWFIPA 88
+Y + GE + CP L +TW+ G+ I E +R+ + LWF+P
Sbjct: 161 SYDTMEGEALVVRCPHSVLSA-----KVTWHHTGTRKRIPEEEEGSRVFSKGIFLWFLPT 325
Query: 89 ALEDSGLYECEVRSLNRSK-QKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDL 147
+LEDSG Y C + + SK ++ +N++V G CF + Y GKI CP
Sbjct: 326 SLEDSGNYTCVINYPDGSKKERKMNVQVHPYKQGTCFPSRILY---ANETRKGKISCPTF 496
Query: 148 ENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYM 207
N+++ I WYK+C+ ++ +R + + I I N+ +D G YTC+ YT+
Sbjct: 497 RNYENATIIQ----WYKDCRP--IQGERYFMHDPY--IFIENLNKEDDGYYTCQFTYTHR 652
Query: 208 GKQYNVSRTMNL--EVKESPLKMRPEFIYPNN-NTIEVELGSHVVMECNVSSGVYG---L 261
G+ +NVS T E K S L + + ++P + + +EVELG+ ++C G+
Sbjct: 653 GRVFNVSATRIFVSEAKHSSLPV--QILFPKDEDVLEVELGAAFSLKCQARLGIKKQPIA 826
Query: 262 LPYWQVNDEDVDSFDST-YREQF-YEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHFIY 319
+ W VN + D R++F Y EG H IS ++ D F C +
Sbjct: 827 VVTWDVNKMPAEYADEEKIRQEFSYFEGQ-HQEYYGEATLTISNIEHTDLQSSFSCVAMN 1003
Query: 320 DSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXV-YKIFKIDIVLWYRSSCHPLL 378
+ + + L ++ V Y+ F++DIVL YR
Sbjct: 1004EMGNTRTTVTLRLKKKSGPNVLMIAGFLVFLMSVAVSVVLYQSFRVDIVLLYRDLFQAYS 1183
Query: 379 GKKVSDGKIYDAYVLYPKNRESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLAGEAV 438
K DGKIYDAYV+YP++ + + F +I+P++LE +CGY L I+GR+ GE
Sbjct: 1184VK--DDGKIYDAYVIYPRSHSTEATFVEYFVYQIMPDILENKCGYTLCIYGRDTYPGEDK 1357
Query: 439 IDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXXXXDY 498
+ +++I +SRR+II+L + E ++H+A+YNALIQ+ Y
Sbjct: 1358ANAIEKRIQKSRRLIILLTQQ--LINCQELNYDQHIALYNALIQNDTKVILLEMEKMGSY 1531
Query: 499 ANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRKHGSSS 549
N+ ES++Y+ ++ G ++W + S++++FWK VRYHMP S S
Sbjct: 1532ENLQESLRYIIKQQGTVKWKEQHTVHPQSSNSKFWKHVRYHMPVTLRSSDS 1684
>dbj|AB041739.2|AB041739 Gallus gallus mRNA for ST2LV, complete cds
Length = 2830
Score = 204 bits (518), Expect = 2e-50
Identities = 148/530 (27%), Positives = 242/530 (44%), Gaps = 10/530 (1%)
Frame = +2
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERR-ARIHQRKGLLWFIPA 88
+Y + GE + CP L +TW+ G+ I E +R+ + LWF+P
Sbjct: 161 SYDTMEGEALVVRCPHSVLSA-----KVTWHHTGTRKRIPEEEEGSRVFSKGIFLWFLPT 325
Query: 89 ALEDSGLYECEVRSLNRSK-QKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDL 147
+LEDSG Y C + + SK ++ +N++V G CF + Y GKI CP
Sbjct: 326 SLEDSGNYTCVINYPDGSKKERKMNVQVHPYKQGTCFPSRILY---ANETRKGKISCPTF 496
Query: 148 ENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYM 207
N+++ I WYK+C+ ++ +R + + I I N+ +D G YTC+ YT+
Sbjct: 497 RNYENATIIQ----WYKDCRP--IQGERYFMHDPY--IFIENLNKEDDGYYTCQFTYTHR 652
Query: 208 GKQYNVSRTMNL--EVKESPLKMRPEFIYPNN-NTIEVELGSHVVMECNVSSGVYG---L 261
G+ +NVS T E K S L + + ++P + + +EVELG+ ++C G+
Sbjct: 653 GRVFNVSATRIFVSEAKHSSLPV--QILFPKDEDVLEVELGAAFSLKCQARLGIKKQPIA 826
Query: 262 LPYWQVNDEDVDSFDST-YREQF-YEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHFIY 319
+ W VN + D R++F Y EG H IS ++ D F C +
Sbjct: 827 VVTWDVNKMPAEYADEEKIRQEFSYFEGQ-HQEYYGEATLTISNIEHTDLQSSFSCVAMN 1003
Query: 320 DSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCHPLLG 379
+ + + L L
Sbjct: 1004EMGNTRTTVTLR----------------------------------------------LK 1045
Query: 380 KKVSDGKIYDAYVLYPKNRESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLAGEAVI 439
KK GKIYDAYV+YP++ + + F +I+P++LE +CGY L I+GR+ GE
Sbjct: 1046KKY--GKIYDAYVIYPRSHSTEATFVEYFVYQIMPDILENKCGYTLCIYGRDTYPGEDKA 1219
Query: 440 DVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXXXXDYA 499
+ +++I +SRR+II+L + E ++H+A+YNALIQ+ Y
Sbjct: 1220NAIEKRIQKSRRLIILLTQQ--LINCQELNYDQHIALYNALIQNDTKVILLEMEKMGSYE 1393
Query: 500 NMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRKHGSSS 549
N+ ES++Y+ ++ G ++W + S++++FWK VRYHMP S S
Sbjct: 1394NLQESLRYIIKQQGTVKWKEQHTVHPQSSNSKFWKHVRYHMPVTLRSSDS 1543
>dbj|D13695.1|MUSST2L Mus musculus mRNA for ST2L protein, complete cds
Length = 4989
Score = 202 bits (515), Expect = 5e-50
Identities = 148/533 (27%), Positives = 245/533 (45%), Gaps = 17/533 (3%)
Frame = +1
Query: 34 LVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDS 93
L E + CP S Y + WY + +N I T++R RI + L F+PA +EDS
Sbjct: 139 LENEALIVRCP----QRGRSTYPVEWYYSDTNESIPTQKRNRIFVSRDRLKFLPARVEDS 306
Query: 94 GLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDE 153
G+Y C +RS N +K +N+ + K + Y + S KI CP ++ +
Sbjct: 307 GIYACVIRSPNLNKTGYLNVTIHKKPPSCNIPDYLMYSTVRGSDKNFKITCPTIDLY--- 477
Query: 154 DNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNV 213
N + W+K CK+ L++ R + + I NVT D+G+YTC+ + G Y V
Sbjct: 478 -NWTAPVQWFKNCKA--LQEPR--FRAHRSYLFIDNVTHDDEGDYTCQFTHAENGTNYIV 642
Query: 214 SRTMNLEVKESPLKMRPEFIY-PNNNTIEVELGSHVVMECNV--SSGVYGLLP-YWQVND 269
+ T + V+E M P P N+T+EVE+G + C+ G + L WQ+N
Sbjct: 643 TATRSFTVEEKGFSMFPVITNPPYNHTMEVEIGKPASIACSACFGKGSHFLADVLWQINK 822
Query: 270 EDVDSFDST--YREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHF--IYDSQEFT 325
V +F E+ E + + + I+ V KD + ++ C ++ T
Sbjct: 823 TVVGNFGEARIQEEEGRNESSSNDMDCLTSVLRITGVTEKDLSLEYDCLALNLHGMIRHT 1002
Query: 326 SYIKLEHPVQNXXXXXXXXX-XXXXXXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVSD 384
++ + P+ + V K+F I++ L++R P K +D
Sbjct: 1003IRLRRKQPIDHRSIYYIVAGCSLLLMFINVLVIVLKVFWIEVALFWRDIVTPY--KTRND 1176
Query: 385 GKIYDAYVLYP---KNRESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLAGEAVIDV 441
GK+YDAY++YP + + +S + F LP+VLE +CGY L I+GR+ L G+ V
Sbjct: 1177GKLYDAYIIYPRVFRGSAAGTHSVEYFVHHTLPDVLENKCGYKLCIYGRDLLPGQDAATV 1356
Query: 442 TDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXX-----XXXXXXX 496
+ I SRR + +L P E A E+ +A+++ALIQ+
Sbjct: 1357VESSIQNSRRQVFVLAPH--MMHSKEFAYEQEIALHSALIQNNSKVILIEMEPLGEASRL 1530
Query: 497 DYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRKHGSSS 549
++ +S++++ + G I+W D S S++FWK VRY MP + S +
Sbjct: 1531QVGDLQDSLQHLVKIQGTIKWREDHVADKQSLSSKFWKHVRYQMPVPERASKT 1689
>dbj|AB012701.2|AB012701 Homo sapiens mRNA for ST2L, 5' noncoding region including distal
exon (exon 1a), complete cds
Length = 2058
Score = 201 bits (512), Expect = 1e-49
Identities = 146/526 (27%), Positives = 247/526 (46%), Gaps = 18/526 (3%)
Frame = +2
Query: 34 LVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDS 93
L E + CP P Y + WY + +N I T+ R R+ LL F+PA + DS
Sbjct: 350 LENEALIVRCPRQGKP----SYTVDWYYSQTNKSIPTQERNRVFASGQLLKFLPAEVADS 517
Query: 94 GLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDE 153
G+Y C VRS ++ N+ ++K + + Y + S KI CP ++ +
Sbjct: 518 GIYTCIVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYSTVSGSEKNSKIYCPTIDLY--- 688
Query: 154 DNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNV 213
N + W+K C++ L+ R ++ ++I NV +D G+YTC+ ++ G Y+V
Sbjct: 689 -NWTAPLEWFKNCQA--LQGSR--YRAHKSFLVIDNVMTEDAGDYTCKFIHNENGANYSV 853
Query: 214 SRTMNLEVK-ESPLKMRPEFIYPNNNTI-EVELGSHVVMECNVSSG---VYGLLPYWQVN 268
+ T + VK E + P P N I EVE+G + + C+ G + WQ+N
Sbjct: 854 TATRSFTVKDEQGFSLFPVIGAPAQNEIKEVEIGKNANLTCSACFGKGTQFLAAVLWQLN 1033
Query: 269 DEDVDSFDS--TYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHF--IYDSQEF 324
+ F +E+ + +G+A I++VK +D ++ C ++ +
Sbjct: 1034GTKITDFGEPRIQQEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQYDCLALNLHGLRRH 1213
Query: 325 TSYIKLEHPVQNXXXX-XXXXXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVS 383
T + ++P+ + + K+F I+ L +R P K +
Sbjct: 1214TVRLSRKNPIDHHSIYCIIAVCSVFLMLINVLVIILKMFWIEATLLWRDIAKPY--KTRN 1387
Query: 384 DGKIYDAYVLYPKNRESCLYSS---DIFALKILPEVLERQCGYNLFIFGRNDLAGEAVID 440
DGK+YDAYV+YP+N +S + + F +ILP+VLE +CGY L I+GR+ L GE V+
Sbjct: 1388DGKLYDAYVVYPRNYKSSTDGASRVEHFVHQILPDVLENKCGYTLCIYGRDMLPGEDVVT 1567
Query: 441 VTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXXXXDY-- 498
+ I +SRR I IL P+ + E A E+ +A++ ALIQ+ +
Sbjct: 1568AVETNIRKSRRHIFILTPQIT--HNKEFAYEQEVALHCALIQNDAKVILIEMEALSELDM 1741
Query: 499 ---ANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMP 541
+ +S++++ + G I+W D S +++FWK VRY MP
Sbjct: 1742LQAEALQDSLQHLMKVQGTIKWREDHIANKRSLNSKFWKHVRYQMP 1879
>ref|NM_016232.2| Homo sapiens interleukin 1 receptor-like 1 (IL1RL1), mRNA
Length = 1671
Score = 201 bits (512), Expect = 1e-49
Identities = 146/526 (27%), Positives = 247/526 (46%), Gaps = 18/526 (3%)
Frame = +1
Query: 34 LVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDS 93
L E + CP P Y + WY + +N I T+ R R+ LL F+PA + DS
Sbjct: 79 LENEALIVRCPRQGKP----SYTVDWYYSQTNKSIPTQERNRVFASGQLLKFLPAEVADS 246
Query: 94 GLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDE 153
G+Y C VRS ++ N+ ++K + + Y + S KI CP ++ +
Sbjct: 247 GIYTCIVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYSTVSGSEKNSKIYCPTIDLY--- 417
Query: 154 DNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNV 213
N + W+K C++ L+ R ++ ++I NV +D G+YTC+ ++ G Y+V
Sbjct: 418 -NWTAPLEWFKNCQA--LQGSR--YRAHKSFLVIDNVMTEDAGDYTCKFIHNENGANYSV 582
Query: 214 SRTMNLEVK-ESPLKMRPEFIYPNNNTI-EVELGSHVVMECNVSSG---VYGLLPYWQVN 268
+ T + VK E + P P N I EVE+G + + C+ G + WQ+N
Sbjct: 583 TATRSFTVKDEQGFSLFPVIGAPAQNEIKEVEIGKNANLTCSACFGKGTQFLAAVLWQLN 762
Query: 269 DEDVDSFDS--TYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHF--IYDSQEF 324
+ F +E+ + +G+A I++VK +D ++ C ++ +
Sbjct: 763 GTKITDFGEPRIQQEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQYDCLALNLHGLRRH 942
Query: 325 TSYIKLEHPVQNXXXX-XXXXXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVS 383
T + ++P+ + + K+F I+ L +R P K +
Sbjct: 943 TVRLSRKNPIDHHSIYCIIAVCSVFLMLINVLVIILKMFWIEATLLWRDIAKPY--KTRN 1116
Query: 384 DGKIYDAYVLYPKNRESCLYSS---DIFALKILPEVLERQCGYNLFIFGRNDLAGEAVID 440
DGK+YDAYV+YP+N +S + + F +ILP+VLE +CGY L I+GR+ L GE V+
Sbjct: 1117DGKLYDAYVVYPRNYKSSTDGASRVEHFVHQILPDVLENKCGYTLCIYGRDMLPGEDVVT 1296
Query: 441 VTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXXXXDY-- 498
+ I +SRR I IL P+ + E A E+ +A++ ALIQ+ +
Sbjct: 1297AVETNIRKSRRHIFILTPQIT--HNKEFAYEQEVALHCALIQNDAKVILIEMEALSELDM 1470
Query: 499 ---ANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMP 541
+ +S++++ + G I+W D S +++FWK VRY MP
Sbjct: 1471LQAEALQDSLQHLMKVQGTIKWREDHIANKRSLNSKFWKHVRYQMP 1608
>gb|U04317.1|RNU04317 Rattus norvegicus Fit-1M (Fit-1) mRNA, complete cds
Length = 2065
Score = 197 bits (502), Expect = 2e-48
Identities = 143/508 (28%), Positives = 228/508 (44%), Gaps = 22/508 (4%)
Frame = +2
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
WY + +N I T++R RI + L F+PA +EDSG+Y C +RS K +N+ ++K
Sbjct: 434 WYYSNTNERIPTQKRNRIFVSRDRLKFLPAKVEDSGIYTCVIRSPESIKTGSLNVTIYKR 613
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
M Y + S KI CP + + N + W+K CK+ L+ R
Sbjct: 614 PPNCKIPDYMMYSTVDGSDKNSKITCPTIALY----NWTAPVQWFKNCKA--LQGPR--F 769
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIY-PNN 237
+ + I V+ D+G+YTCR +T G Y V+ T + V+E P P+N
Sbjct: 770 RAHMSYLFIDKVSHVDEGDYTCRFTHTENGTNYIVTATRSFTVEEKGFSTFPVITNPPHN 949
Query: 238 NTIEVELGSHVVMECNVSSGVYG--LLPYWQVNDEDVDSFDST--YREQFYEEGMPHGIA 293
T+EVE+G + C+ G + WQ+N + SF E+ + +G+
Sbjct: 950 YTVEVEIGKTANIACSACFGTASQFVAVLWQINKTRIGSFGKARIQEEKGPNKSSSNGMI 1129
Query: 294 VSGTKFNISEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPVQ---------NXXXXXXXX 344
+ I+ V KD++ K YD + + HPV+
Sbjct: 1130CLTSLLRITGVTDKDFSLK------YDCVAMNHHGVIRHPVRLRRKQPIDHQSTYYIVAG 1291
Query: 345 XXXXXXXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLYP---KNRESC 401
V K+F I++ L++R P K +DGK+YDAY++YP + +
Sbjct: 1292CSLLLMFINVLVIVLKVFWIEVALFWRDIMAPY--KTQNDGKLYDAYIIYPRVFRGSAAG 1465
Query: 402 LYSSDIFALKILPEVLERQCGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPS 461
S + F LP+VLE +CGY L I+GR+ L G+ V + I SRR + +L P
Sbjct: 1466TGSVEYFVHYTLPDVLENKCGYKLCIYGRDLLPGQDAATVVESSIQNSRRQVFVLAPH-- 1639
Query: 462 CYGILEDASEKHLAVYNALIQDGXXXXX-----XXXXXXXDYANMPESIKYVKQKYGAIR 516
E A E+ +A+++ALIQ+ ++ +S++++ + G I+
Sbjct: 1640MMHSKEFAYEQEIALHSALIQNNSKVILIEMEPMGEASRLQLGDLQDSLQHLVKMQGTIK 1819
Query: 517 WTGDFSERSHSASTRFWKKVRYHMPSRK 544
W D S S++FWK VRY MP K
Sbjct: 1820WREDHVADKQSLSSKFWKHVRYQMPVPK 1903
>ref|NM_013123.1| Rattus norvegicus Interleukin 1 receptor, type I (Il1r1), mRNA
Length = 1048
Score = 177 bits (450), Expect = 2e-42
Identities = 93/252 (36%), Positives = 143/252 (55%)
Frame = +1
Query: 32 FVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALE 91
F V E SCP +T +H + WY+N S PI+ ++ +RIHQ+ LWF+PA +E
Sbjct: 94 FSSVNEIDIRSCP-LTPNEMHGG-TIIWYKNDSKTPISADKDSRIHQQNEHLWFVPAKME 267
Query: 92 DSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFK 151
DSG Y C +R+ + I + V +ND GLC+N + + Q + A G ++CP L+ FK
Sbjct: 268 DSGYYYCIMRNSTYCLKTKITMSVLENDPGLCYNTQASFIQRLHVAGDGSLVCPYLDFFK 447
Query: 152 DEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQY 211
DE+N P++ WYK CK L+D +N ++++NV + +GNYTCR YTY GKQY
Sbjct: 448 DENNELPKVQWYKNCKPLPLDDGNFF--GFKNKLMVMNVAEEHRGNYTCRTSYTYQGKQY 621
Query: 212 NVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDED 271
V+R + + + RP + P N T+E + GS + + CNV +G + L YW+ N +
Sbjct: 622 PVTRVITFITIDDSKRDRPVIMSPRNETMEADPGSTIQLICNV-TGQFTDLVYWKWNGSE 798
Query: 272 VDSFDSTYREQF 283
++ D E +
Sbjct: 799 IEWDDPILAEDY 834
>gb|U14010.1|RNU14010 Rattus norvegicus soluble IL-1 receptor type I mRNA, complete cds
Length = 1048
Score = 177 bits (450), Expect = 2e-42
Identities = 93/252 (36%), Positives = 143/252 (55%)
Frame = +1
Query: 32 FVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALE 91
F V E SCP +T +H + WY+N S PI+ ++ +RIHQ+ LWF+PA +E
Sbjct: 94 FSSVNEIDIRSCP-LTPNEMHGG-TIIWYKNDSKTPISADKDSRIHQQNEHLWFVPAKME 267
Query: 92 DSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFK 151
DSG Y C +R+ + I + V +ND GLC+N + + Q + A G ++CP L+ FK
Sbjct: 268 DSGYYYCIMRNSTYCLKTKITMSVLENDPGLCYNTQASFIQRLHVAGDGSLVCPYLDFFK 447
Query: 152 DEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQY 211
DE+N P++ WYK CK L+D +N ++++NV + +GNYTCR YTY GKQY
Sbjct: 448 DENNELPKVQWYKNCKPLPLDDGNFF--GFKNKLMVMNVAEEHRGNYTCRTSYTYQGKQY 621
Query: 212 NVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDED 271
V+R + + + RP + P N T+E + GS + + CNV +G + L YW+ N +
Sbjct: 622 PVTRVITFITIDDSKRDRPVIMSPRNETMEADPGSTIQLICNV-TGQFTDLVYWKWNGSE 798
Query: 272 VDSFDSTYREQF 283
++ D E +
Sbjct: 799 IEWDDPILAEDY 834
>ref|NM_030688.1| Mus musculus interkeukin 1 receptor accessory protein-like 2
(Il1rapl2), mRNA
Length = 2518
Score = 176 bits (447), Expect = 4e-42
Identities = 151/552 (27%), Positives = 246/552 (44%), Gaps = 29/552 (5%)
Frame = +1
Query: 31 YFVLVGEPTAISCPVITLPMLHSDYN--------LTWYRNGSNM--PITTERRARIHQRK 80
Y L GEP + C + + ++Y+ L WYRN ++ PI R+ + +
Sbjct: 241 YMALAGEPVRVKCALF-YSYIRTNYSMAQSTGLRLMWYRNKGDLEEPIIFSE-VRMSKEE 414
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAG 140
+WF A +DSG Y C +R+ + ++L V +N++GLC+N ++Y + +
Sbjct: 415 DAIWFHSAEEQDSGFYTCVLRNSTYCMKVSMSLTVAENESGLCYNSRIRYLEKSEVTKRK 594
Query: 141 KIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+I CPD+++FK D P++ WYKECK R ++ + NA+LI V +D GNYTC
Sbjct: 595 EISCPDMDDFKKSDQ-EPDVVWYKECKPKMW---RSIIIQKGNALLIQEVQEEDGGNYTC 762
Query: 201 RMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN---TIEVELGSHVVMECNV--- 254
+ Y GK V RT L+V P+ ++P N I+V+LG + + C
Sbjct: 763 EL--KYEGKL--VRRTTELKVTALLTDKPPKPLFPMENQPSVIDVQLGKPLNIPCKAFFG 930
Query: 255 SSGVYGLLPYWQVNDEDVDSFDSTYRE---QFYEEGM-PHGIAVSGTKFNISEVKLKDYA 310
SG G + YW ++ ++ RE + +E + + ++ ++ E L +Y
Sbjct: 931 FSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLGEKEVELTLIFDSVVEADLANYT 1110
Query: 311 YKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWY 370
CH + + + L VYK + I+++L+Y
Sbjct: 1111----CHVENRNGRKHASVLLRKKDLIYKIELAGGLGAIFLLLILLLVVYKCYNIELMLFY 1278
Query: 371 RSSCHPLLGKKVSDGKIYDAYVLYPKNRESCL----YSSDIFALKILPEVLERQCGYNLF 426
R + D K YDAY+ Y K + L + FAL+ILP+VLE+ GY LF
Sbjct: 1279RQRFGG--DETTDDNKEYDAYLSYTKVDQDTLDCDNTEEEQFALEILPDVLEKHYGYKLF 1452
Query: 427 IFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPE---PSCYGILEDASEKHLAVYNALIQD 483
I R+ + I+ + QSRR+II+L P+ + I E S H N L+
Sbjct: 1453IPERDLIPSGTYIEDLTRCVEQSRRLIIVLTPDYILRRGWSIFELESRLH----NMLVSG 1620
Query: 484 GXXXXXXXXXXXXDYANMP--ESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMP 541
N ES+K+ + I+W G +S +++FWK + Y MP
Sbjct: 1621EIKVILIECTELKGKVNCQEVESLKHNIKLLSLIKWKG---PKSSKLNSKFWKHLVYEMP 1791
Query: 542 SRKHGSSSGFHL 553
+K S H+
Sbjct: 1792IKKKEMLSHCHV 1827
>gb|AF284437.1|AF284437 Mus musculus TIGIRR-1 mRNA, complete cds
Length = 2518
Score = 176 bits (447), Expect = 4e-42
Identities = 151/552 (27%), Positives = 246/552 (44%), Gaps = 29/552 (5%)
Frame = +1
Query: 31 YFVLVGEPTAISCPVITLPMLHSDYN--------LTWYRNGSNM--PITTERRARIHQRK 80
Y L GEP + C + + ++Y+ L WYRN ++ PI R+ + +
Sbjct: 241 YMALAGEPVRVKCALF-YSYIRTNYSMAQSTGLRLMWYRNKGDLEEPIIFSE-VRMSKEE 414
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAG 140
+WF A +DSG Y C +R+ + ++L V +N++GLC+N ++Y + +
Sbjct: 415 DAIWFHSAEEQDSGFYTCVLRNSTYCMKVSMSLTVAENESGLCYNSRIRYLEKSEVTKRK 594
Query: 141 KIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+I CPD+++FK D P++ WYKECK R ++ + NA+LI V +D GNYTC
Sbjct: 595 EISCPDMDDFKKSDQ-EPDVVWYKECKPKMW---RSIIIQKGNALLIQEVQEEDGGNYTC 762
Query: 201 RMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN---TIEVELGSHVVMECNV--- 254
+ Y GK V RT L+V P+ ++P N I+V+LG + + C
Sbjct: 763 EL--KYEGKL--VRRTTELKVTALLTDKPPKPLFPMENQPSVIDVQLGKPLNIPCKAFFG 930
Query: 255 SSGVYGLLPYWQVNDEDVDSFDSTYRE---QFYEEGM-PHGIAVSGTKFNISEVKLKDYA 310
SG G + YW ++ ++ RE + +E + + ++ ++ E L +Y
Sbjct: 931 FSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLGEKEVELTLIFDSVVEADLANYT 1110
Query: 311 YKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWY 370
CH + + + L VYK + I+++L+Y
Sbjct: 1111----CHVENRNGRKHASVLLRKKDLIYKIELAGGLGAIFLLLILLLVVYKCYNIELMLFY 1278
Query: 371 RSSCHPLLGKKVSDGKIYDAYVLYPKNRESCL----YSSDIFALKILPEVLERQCGYNLF 426
R + D K YDAY+ Y K + L + FAL+ILP+VLE+ GY LF
Sbjct: 1279RQRFGG--DETTDDNKEYDAYLSYTKVDQDTLDCDNTEEEQFALEILPDVLEKHYGYKLF 1452
Query: 427 IFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPE---PSCYGILEDASEKHLAVYNALIQD 483
I R+ + I+ + QSRR+II+L P+ + I E S H N L+
Sbjct: 1453IPERDLIPSGTYIEDLTRCVEQSRRLIIVLTPDYILRRGWSIFELESRLH----NMLVSG 1620
Query: 484 GXXXXXXXXXXXXDYANMP--ESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMP 541
N ES+K+ + I+W G +S +++FWK + Y MP
Sbjct: 1621EIKVILIECTELKGKVNCQEVESLKHNIKLLSLIKWKG---PKSSKLNSKFWKHLVYEMP 1791
Query: 542 SRKHGSSSGFHL 553
+K S H+
Sbjct: 1792IKKKEMLSHCHV 1827
>gb|S70238.1|S70238 type I interleukin-1 receptor [rats, intestinal epithelial IEC-18
cells, ATCC 1589, mRNA Partial, 509 nt]
Length = 509
Score = 175 bits (444), Expect = 9e-42
Identities = 90/169 (53%), Positives = 111/169 (65%), Gaps = 1/169 (0%)
Frame = +3
Query: 365 DIVLWYRSSCHPLLGKKVSDGKIYDAYVLYPKNR-ESCLYSSDIFALKILPEVLERQCGY 423
DIVLWYR SC L K SDGK YDAYVLYPK E D F K+LPEVLE Q GY
Sbjct: 3 DIVLWYRDSCSDFLPPKASDGKTYDAYVLYPKTYGEGSFAYLDTFVFKLLPEVLEGQFGY 182
Query: 424 NLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQD 483
LFI GR+D GE I+VT+E + +SRR+IIILV + + L +SE+ +A+Y+ALI++
Sbjct: 183 KLFICGRDDYVGEDTIEVTNENVKRSRRLIIILVRDMGSFSCLGQSSEEQIAIYDALIRE 362
Query: 484 GXXXXXXXXXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRF 532
G DY MPESI+++KQK+GAI W+GDF ER SA TRF
Sbjct: 363 GIKIILLELEEIQDYEKMPESIQFIKQKHGAICWSGDFKERPQSAKTRF 509
>ref|NM_017416.1| Homo sapiens interleukin 1 receptor accessory protein-like 2
(IL1RAPL2), mRNA
Length = 2985
Score = 174 bits (440), Expect = 3e-41
Identities = 147/543 (27%), Positives = 241/543 (44%), Gaps = 29/543 (5%)
Frame = +1
Query: 31 YFVLVGEPTAISCPVITLPMLHSDYN--------LTWYRNGSNM--PITTERRARIHQRK 80
Y L GEP + C + + ++Y+ L WY+N ++ PI R+ + +
Sbjct: 877 YMALAGEPVRVKCALF-YSYIRTNYSTAQSTGLRLMWYKNKGDLEEPIIFSE-VRMSKEE 1050
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAG 140
+WF A +DSG Y C +R+ + ++L V +N++GLC+N ++Y + +
Sbjct: 1051 DSIWFHSAEAQDSGFYTCVLRNSTYCMKVSMSLTVAENESGLCYNSRIRYLEKSEVTKRK 1230
Query: 141 KIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+I CPD+++FK D P++ WYKECK R ++ + NA+LI V +D GNYTC
Sbjct: 1231 EISCPDMDDFKKSDQ-EPDVVWYKECKPKMW---RSIIIQKGNALLIQEVQEEDGGNYTC 1398
Query: 201 RMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN---TIEVELGSHVVMECNV--- 254
+ Y GK V RT L+V P+ ++P N I+V+LG + + C
Sbjct: 1399 EL--KYEGKL--VRRTTELKVTALLTDKPPKPLFPMENQPSVIDVQLGKPLNIPCKAFFG 1566
Query: 255 SSGVYGLLPYWQVNDEDVDSFDSTYRE---QFYEEGMPHGIAVSGTKF-NISEVKLKDYA 310
SG G + YW ++ ++ RE + +E + F ++ E L +Y
Sbjct: 1567 FSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLGEKEVELALIFDSVVEADLANYT 1746
Query: 311 YKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWY 370
CH + + + L +YK + I+++L+Y
Sbjct: 1747 ----CHVENRNGRKHASVLLRKKDLIYKIELAGGLGAIFLLLVLLVVIYKCYNIELMLFY 1914
Query: 371 RSSCHPLLGKKVSDGKIYDAYVLYPKNRESCL----YSSDIFALKILPEVLERQCGYNLF 426
R H + D K YDAY+ Y K + L + FAL++LP+VLE+ GY LF
Sbjct: 1915 RQ--HFGADETNDDNKEYDAYLSYTKVDQDTLDCDNPEEEQFALEVLPDVLEKHYGYKLF 2088
Query: 427 IFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPE---PSCYGILEDASEKHLAVYNALIQD 483
I R+ + ++ + QSRR+II+L P+ + I E S H N L+
Sbjct: 2089 IPERDLIPSGTYMEDLTRYVEQSRRLIIVLTPDYILRRGWSIFELESRLH----NMLVSG 2256
Query: 484 GXXXXXXXXXXXXDYANMP--ESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMP 541
N ES+K + I+W G +S +++FWK + Y MP
Sbjct: 2257 EIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKWKG---SKSSKLNSKFWKHLVYEMP 2427
Query: 542 SRK 544
+K
Sbjct: 2428 IKK 2436
>emb|AJ272208.1|HSA272208 Homo sapiens mRNA for IL-1 receptor accessory protein-like 2
(IL1RAPL-2 gene)
Length = 2985
Score = 174 bits (440), Expect = 3e-41
Identities = 147/543 (27%), Positives = 241/543 (44%), Gaps = 29/543 (5%)
Frame = +1
Query: 31 YFVLVGEPTAISCPVITLPMLHSDYN--------LTWYRNGSNM--PITTERRARIHQRK 80
Y L GEP + C + + ++Y+ L WY+N ++ PI R+ + +
Sbjct: 877 YMALAGEPVRVKCALF-YSYIRTNYSTAQSTGLRLMWYKNKGDLEEPIIFSE-VRMSKEE 1050
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAG 140
+WF A +DSG Y C +R+ + ++L V +N++GLC+N ++Y + +
Sbjct: 1051 DSIWFHSAEAQDSGFYTCVLRNSTYCMKVSMSLTVAENESGLCYNSRIRYLEKSEVTKRK 1230
Query: 141 KIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+I CPD+++FK D P++ WYKECK R ++ + NA+LI V +D GNYTC
Sbjct: 1231 EISCPDMDDFKKSDQ-EPDVVWYKECKPKMW---RSIIIQKGNALLIQEVQEEDGGNYTC 1398
Query: 201 RMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN---TIEVELGSHVVMECNV--- 254
+ Y GK V RT L+V P+ ++P N I+V+LG + + C
Sbjct: 1399 EL--KYEGKL--VRRTTELKVTALLTDKPPKPLFPMENQPSVIDVQLGKPLNIPCKAFFG 1566
Query: 255 SSGVYGLLPYWQVNDEDVDSFDSTYRE---QFYEEGMPHGIAVSGTKF-NISEVKLKDYA 310
SG G + YW ++ ++ RE + +E + F ++ E L +Y
Sbjct: 1567 FSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLGEKEVELALIFDSVVEADLANYT 1746
Query: 311 YKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWY 370
CH + + + L +YK + I+++L+Y
Sbjct: 1747 ----CHVENRNGRKHASVLLRKKDLIYKIELAGGLGAIFLLLVLLVVIYKCYNIELMLFY 1914
Query: 371 RSSCHPLLGKKVSDGKIYDAYVLYPKNRESCL----YSSDIFALKILPEVLERQCGYNLF 426
R H + D K YDAY+ Y K + L + FAL++LP+VLE+ GY LF
Sbjct: 1915 RQ--HFGADETNDDNKEYDAYLSYTKVDQDTLDCDNPEEEQFALEVLPDVLEKHYGYKLF 2088
Query: 427 IFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPE---PSCYGILEDASEKHLAVYNALIQD 483
I R+ + ++ + QSRR+II+L P+ + I E S H N L+
Sbjct: 2089 IPERDLIPSGTYMEDLTRYVEQSRRLIIVLTPDYILRRGWSIFELESRLH----NMLVSG 2256
Query: 484 GXXXXXXXXXXXXDYANMP--ESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMP 541
N ES+K + I+W G +S +++FWK + Y MP
Sbjct: 2257 EIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKWKG---SKSSKLNSKFWKHLVYEMP 2427
Query: 542 SRK 544
+K
Sbjct: 2428 IKK 2436
>gb|AF181285.1|AF181285 Homo sapiens X-linked interleukin-1 receptor accessory protein-like
2 (IL1RAPL2) mRNA, partial cds
Length = 1979
Score = 174 bits (440), Expect = 3e-41
Identities = 147/543 (27%), Positives = 241/543 (44%), Gaps = 29/543 (5%)
Frame = +3
Query: 31 YFVLVGEPTAISCPVITLPMLHSDYN--------LTWYRNGSNM--PITTERRARIHQRK 80
Y L GEP + C + + ++Y+ L WY+N ++ PI R+ + +
Sbjct: 39 YMALAGEPVRVKCALF-YSYIRTNYSTAQSTGLRLMWYKNKGDLEEPIIFSE-VRMSKEE 212
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAG 140
+WF A +DSG Y C +R+ + ++L V +N++GLC+N ++Y + +
Sbjct: 213 DSIWFHSAEAQDSGFYTCVLRNSTYCMKVSMSLTVAENESGLCYNSRIRYLEKSEVTKRK 392
Query: 141 KIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+I CPD+++FK D P++ WYKECK R ++ + NA+LI V +D GNYTC
Sbjct: 393 EISCPDMDDFKKSDQ-EPDVVWYKECKPKMW---RSIIIQKGNALLIQEVQEEDGGNYTC 560
Query: 201 RMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN---TIEVELGSHVVMECNV--- 254
+ Y GK V RT L+V P+ ++P N I+V+LG + + C
Sbjct: 561 EL--KYEGKL--VRRTTELKVTALLTDKPPKPLFPMENQPSVIDVQLGKPLNIPCKAFFG 728
Query: 255 SSGVYGLLPYWQVNDEDVDSFDSTYRE---QFYEEGMPHGIAVSGTKF-NISEVKLKDYA 310
SG G + YW ++ ++ RE + +E + F ++ E L +Y
Sbjct: 729 FSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLGEKEVELALIFDSVVEADLANYT 908
Query: 311 YKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWY 370
CH + + + L +YK + I+++L+Y
Sbjct: 909 ----CHVENRNGRKHASVLLRKKDLIYKIELAGGLGAIFLLLVLLVVIYKCYNIELMLFY 1076
Query: 371 RSSCHPLLGKKVSDGKIYDAYVLYPKNRESCL----YSSDIFALKILPEVLERQCGYNLF 426
R H + D K YDAY+ Y K + L + FAL++LP+VLE+ GY LF
Sbjct: 1077RQ--HFGADETNDDNKEYDAYLSYTKVDQDTLDCDNPEEEQFALEVLPDVLEKHYGYKLF 1250
Query: 427 IFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPE---PSCYGILEDASEKHLAVYNALIQD 483
I R+ + ++ + QSRR+II+L P+ + I E S H N L+
Sbjct: 1251IPERDLIPSGTYMEDLTRYVEQSRRLIIVLTPDYILRRGWSIFELESRLH----NMLVSG 1418
Query: 484 GXXXXXXXXXXXXDYANMP--ESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMP 541
N ES+K + I+W G +S +++FWK + Y MP
Sbjct: 1419EIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKWKG---SKSSKLNSKFWKHLVYEMP 1589
Query: 542 SRK 544
+K
Sbjct: 1590IKK 1598
>emb|AJ290436.1|HSA290436 Homo sapiens mRNA for IL1RAPL-2 related protein
Length = 2080
Score = 174 bits (440), Expect = 3e-41
Identities = 147/543 (27%), Positives = 241/543 (44%), Gaps = 29/543 (5%)
Frame = +2
Query: 31 YFVLVGEPTAISCPVITLPMLHSDYN--------LTWYRNGSNM--PITTERRARIHQRK 80
Y L GEP + C + + ++Y+ L WY+N ++ PI R+ + +
Sbjct: 140 YMALAGEPVRVKCALF-YSYIRTNYSTAQSTGLRLMWYKNKGDLEEPIIFSE-VRMSKEE 313
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAG 140
+WF A +DSG Y C +R+ + ++L V +N++GLC+N ++Y + +
Sbjct: 314 DSIWFHSAEAQDSGFYTCVLRNSTYCMKVSMSLTVAENESGLCYNSRIRYLEKSEVTKRK 493
Query: 141 KIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+I CPD+++FK D P++ WYKECK R ++ + NA+LI V +D GNYTC
Sbjct: 494 EISCPDMDDFKKSDQ-EPDVVWYKECKPKMW---RSIIIQKGNALLIQEVQEEDGGNYTC 661
Query: 201 RMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN---TIEVELGSHVVMECNV--- 254
+ Y GK V RT L+V P+ ++P N I+V+LG + + C
Sbjct: 662 EL--KYEGKL--VRRTTELKVTALLTDKPPKPLFPMENQPSVIDVQLGKPLNIPCKAFFG 829
Query: 255 SSGVYGLLPYWQVNDEDVDSFDSTYRE---QFYEEGMPHGIAVSGTKF-NISEVKLKDYA 310
SG G + YW ++ ++ RE + +E + F ++ E L +Y
Sbjct: 830 FSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLGEKEVELALIFDSVVEADLANYT 1009
Query: 311 YKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWY 370
CH + + + L +YK + I+++L+Y
Sbjct: 1010----CHVENRNGRKHASVLLRKKDLIYKIELAGGLGAIFLLLVLLVVIYKCYNIELMLFY 1177
Query: 371 RSSCHPLLGKKVSDGKIYDAYVLYPKNRESCL----YSSDIFALKILPEVLERQCGYNLF 426
R H + D K YDAY+ Y K + L + FAL++LP+VLE+ GY LF
Sbjct: 1178RQ--HFGADETNDDNKEYDAYLSYTKVDQDTLDCDNPEEEQFALEVLPDVLEKHYGYKLF 1351
Query: 427 IFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPE---PSCYGILEDASEKHLAVYNALIQD 483
I R+ + ++ + QSRR+II+L P+ + I E S H N L+
Sbjct: 1352IPERDLIPSGTYMEDLTRYVEQSRRLIIVLTPDYILRRGWSIFELESRLH----NMLVSG 1519
Query: 484 GXXXXXXXXXXXXDYANMP--ESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMP 541
N ES+K + I+W G +S +++FWK + Y MP
Sbjct: 1520EIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKWKG---SKSSKLNSKFWKHLVYEMP 1690
Query: 542 SRK 544
+K
Sbjct: 1691IKK 1699
>gb|AF212016.1|AF212016 Homo sapiens interleukin-1 receptor 9 (IL1R9) mRNA, complete cds
Length = 2061
Score = 174 bits (440), Expect = 3e-41
Identities = 147/543 (27%), Positives = 241/543 (44%), Gaps = 29/543 (5%)
Frame = +1
Query: 31 YFVLVGEPTAISCPVITLPMLHSDYN--------LTWYRNGSNM--PITTERRARIHQRK 80
Y L GEP + C + + ++Y+ L WY+N ++ PI R+ + +
Sbjct: 121 YMALAGEPVRVKCALF-YSYIRTNYSTAQSTGLRLMWYKNKGDLEEPIIFSE-VRMSKEE 294
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAG 140
+WF A +DSG Y C +R+ + ++L V +N++GLC+N ++Y + +
Sbjct: 295 DSIWFHSAEAQDSGFYTCVLRNSTYCMKVSMSLTVAENESGLCYNSRIRYLEKSEVTKRK 474
Query: 141 KIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+I CPD+++FK D P++ WYKECK R ++ + NA+LI V +D GNYTC
Sbjct: 475 EISCPDMDDFKKSDQ-EPDVVWYKECKPKMW---RSIIIQKGNALLIQEVQEEDGGNYTC 642
Query: 201 RMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN---TIEVELGSHVVMECNV--- 254
+ Y GK V RT L+V P+ ++P N I+V+LG + + C
Sbjct: 643 EL--KYEGKL--VRRTTELKVTALLTDKPPKPLFPMENQPSVIDVQLGKPLNIPCKAFFG 810
Query: 255 SSGVYGLLPYWQVNDEDVDSFDSTYRE---QFYEEGMPHGIAVSGTKF-NISEVKLKDYA 310
SG G + YW ++ ++ RE + +E + F ++ E L +Y
Sbjct: 811 FSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLGEKEVELALIFDSVVEADLANYT 990
Query: 311 YKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWY 370
CH + + + L +YK + I+++L+Y
Sbjct: 991 ----CHVENRNGRKHASVLLRKKDLIYKIELAGGLGAIFLLLVLLVVIYKCYNIELMLFY 1158
Query: 371 RSSCHPLLGKKVSDGKIYDAYVLYPKNRESCL----YSSDIFALKILPEVLERQCGYNLF 426
R H + D K YDAY+ Y K + L + FAL++LP+VLE+ GY LF
Sbjct: 1159RQ--HFGADETNDDNKEYDAYLSYTKVDQDTLDCDNPEEEQFALEVLPDVLEKHYGYKLF 1332
Query: 427 IFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPE---PSCYGILEDASEKHLAVYNALIQD 483
I R+ + ++ + QSRR+II+L P+ + I E S H N L+
Sbjct: 1333IPERDLIPSGTYMEDLTRYVEQSRRLIIVLTPDYILRRGWSIFELESRLH----NMLVSG 1500
Query: 484 GXXXXXXXXXXXXDYANMP--ESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMP 541
N ES+K + I+W G +S +++FWK + Y MP
Sbjct: 1501EIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKWKG---SKSSKLNSKFWKHLVYEMP 1671
Query: 542 SRK 544
+K
Sbjct: 1672IKK 1680
>ref|XM_034808.1| Homo sapiens interleukin 1 receptor accessory protein-like 2
(IL1RAPL2), mRNA
Length = 2152
Score = 174 bits (440), Expect = 3e-41
Identities = 147/543 (27%), Positives = 241/543 (44%), Gaps = 29/543 (5%)
Frame = +2
Query: 31 YFVLVGEPTAISCPVITLPMLHSDYN--------LTWYRNGSNM--PITTERRARIHQRK 80
Y L GEP + C + + ++Y+ L WY+N ++ PI R+ + +
Sbjct: 44 YMALAGEPVRVKCALF-YSYIRTNYSTAQSTGLRLMWYKNKGDLEEPIIFSE-VRMSKEE 217
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAG 140
+WF A +DSG Y C +R+ + ++L V +N++GLC+N ++Y + +
Sbjct: 218 DSIWFHSAEAQDSGFYTCVLRNSTYCMKVSMSLTVAENESGLCYNSRIRYLEKSEVTKRK 397
Query: 141 KIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+I CPD+++FK D P++ WYKECK R ++ + NA+LI V +D GNYTC
Sbjct: 398 EISCPDMDDFKKSDQ-EPDVVWYKECKPKMW---RSIIIQKGNALLIQEVQEEDGGNYTC 565
Query: 201 RMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN---TIEVELGSHVVMECNV--- 254
+ Y GK V RT L+V P+ ++P N I+V+LG + + C
Sbjct: 566 EL--KYEGKL--VRRTTELKVTALLTDKPPKPLFPMENQPSVIDVQLGKPLNIPCKAFFG 733
Query: 255 SSGVYGLLPYWQVNDEDVDSFDSTYRE---QFYEEGMPHGIAVSGTKF-NISEVKLKDYA 310
SG G + YW ++ ++ RE + +E + F ++ E L +Y
Sbjct: 734 FSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLGEKEVELALIFDSVVEADLANYT 913
Query: 311 YKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWY 370
CH + + + L +YK + I+++L+Y
Sbjct: 914 ----CHVENRNGRKHASVLLRKKDLIYKIELAGGLGAIFLLLVLLVVIYKCYNIELMLFY 1081
Query: 371 RSSCHPLLGKKVSDGKIYDAYVLYPKNRESCL----YSSDIFALKILPEVLERQCGYNLF 426
R H + D K YDAY+ Y K + L + FAL++LP+VLE+ GY LF
Sbjct: 1082RQ--HFGADETNDDNKEYDAYLSYTKVDQDTLDCDNPEEEQFALEVLPDVLEKHYGYKLF 1255
Query: 427 IFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPE---PSCYGILEDASEKHLAVYNALIQD 483
I R+ + ++ + QSRR+II+L P+ + I E S H N L+
Sbjct: 1256IPERDLIPSGTYMEDLTRYVEQSRRLIIVLTPDYILRRGWSIFELESRLH----NMLVSG 1423
Query: 484 GXXXXXXXXXXXXDYANMP--ESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMP 541
N ES+K + I+W G +S +++FWK + Y MP
Sbjct: 1424EIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKWKG---SKSSKLNSKFWKHLVYEMP 1594
Query: 542 SRK 544
+K
Sbjct: 1595IKK 1603
>gb|AF284436.1|AF284436 Homo sapiens TIGIRR-1 mRNA, complete cds
Length = 2212
Score = 174 bits (440), Expect = 3e-41
Identities = 147/543 (27%), Positives = 241/543 (44%), Gaps = 29/543 (5%)
Frame = +2
Query: 31 YFVLVGEPTAISCPVITLPMLHSDYN--------LTWYRNGSNM--PITTERRARIHQRK 80
Y L GEP + C + + ++Y+ L WY+N ++ PI R+ + +
Sbjct: 272 YMALAGEPVRVKCALF-YSYIRTNYSTAQSTGLRLMWYKNKGDLEEPIIFSE-VRMSKEE 445
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAG 140
+WF A +DSG Y C +R+ + ++L V +N++GLC+N ++Y + +
Sbjct: 446 DSIWFHSAEAQDSGFYTCVLRNSTYCMKVSMSLTVAENESGLCYNSRIRYLEKSEVTKRK 625
Query: 141 KIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+I CPD+++FK D P++ WYKECK R ++ + NA+LI V +D GNYTC
Sbjct: 626 EISCPDMDDFKKSDQ-EPDVVWYKECKPKMW---RSIIIQKGNALLIQEVQEEDGGNYTC 793
Query: 201 RMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN---TIEVELGSHVVMECNV--- 254
+ Y GK V RT L+V P+ ++P N I+V+LG + + C
Sbjct: 794 EL--KYEGKL--VRRTTELKVTALLTDKPPKPLFPMENQPSVIDVQLGKPLNIPCKAFFG 961
Query: 255 SSGVYGLLPYWQVNDEDVDSFDSTYRE---QFYEEGMPHGIAVSGTKF-NISEVKLKDYA 310
SG G + YW ++ ++ RE + +E + F ++ E L +Y
Sbjct: 962 FSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLGEKEVELALIFDSVVEADLANYT 1141
Query: 311 YKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWY 370
CH + + + L +YK + I+++L+Y
Sbjct: 1142----CHVENRNGRKHASVLLRKKDLIYKIELAGGLGAIFLLLVLLVVIYKCYNIELMLFY 1309
Query: 371 RSSCHPLLGKKVSDGKIYDAYVLYPKNRESCL----YSSDIFALKILPEVLERQCGYNLF 426
R H + D K YDAY+ Y K + L + FAL++LP+VLE+ GY LF
Sbjct: 1310RQ--HFGADETNDDNKEYDAYLSYTKVDQDTLDCDNPEEEQFALEVLPDVLEKHYGYKLF 1483
Query: 427 IFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPE---PSCYGILEDASEKHLAVYNALIQD 483
I R+ + ++ + QSRR+II+L P+ + I E S H N L+
Sbjct: 1484IPERDLIPSGTYMEDLTRYVEQSRRLIIVLTPDYILRRGWSIFELESRLH----NMLVSG 1651
Query: 484 GXXXXXXXXXXXXDYANMP--ESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMP 541
N ES+K + I+W G +S +++FWK + Y MP
Sbjct: 1652EIKVILIECTELKGKVNCQEVESLKRSIKLLSLIKWKG---SKSSKLNSKFWKHLVYEMP 1822
Query: 542 SRK 544
+K
Sbjct: 1823IKK 1831
>gb|AF181284.1|AF181284 Homo sapiens X-linked interleukin-1 receptor accessory protein-like 1
(IL1RAPL1) mRNA, complete cds
Length = 2722
Score = 167 bits (422), Expect = 3e-39
Identities = 150/565 (26%), Positives = 250/565 (43%), Gaps = 42/565 (7%)
Frame = +2
Query: 22 SAEECV-----ICNYFVLVGEPTAISCPVITLPMLHSDYNLT--------WYRNGS---- 64
SA+ C I Y VLVGEP I C + + ++Y+L WY++
Sbjct: 710 SADGCTDWSIDIKKYQVLVGEPVRIKCALF-YGYIRTNYSLAQSAGLSLMWYKSSGPGDF 886
Query: 65 NMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCF 124
PI + +R+ + + +WF P L+DSGLY C +R+ + I+L V +ND GLC+
Sbjct: 887 EEPIAFDG-SRMSKEEDSIWFRPTLLQDSGLYACVIRNSTYCMKVSISLTVGENDTGLCY 1063
Query: 125 NGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENA 184
N +MKY + + + + +I C D+E+F PEI WYKEC++ + R + +
Sbjct: 1064 NSKMKYFEKAELSKSKEISCRDIEDFLLPTR-EPEILWYKECRT---KTWRPSIVFKRDT 1231
Query: 185 ILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTI---E 241
+LI V D GNYTC + Y + V RT L V P+ +YP + + E
Sbjct: 1232 LLIREVREDDIGNYTCELKY----GGFVVRRTTELTVTAPLTDKPPKLLYPMESKLTIQE 1399
Query: 242 VELGSHVVMECNVSSGVYG---LLPYWQVNDEDVDSFDST---------YREQFYEEGMP 289
+LG + C G G L YW ++ ++ D +E E+ +
Sbjct: 1400 TQLGDSANLTCRAFFGYSGDVSPLIYWMKGEKFIEDLDENRVWESDIRILKEHLGEQEVS 1579
Query: 290 HGIAVSGTKFNISEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXX 349
+ V ++ E L +Y+ C+ + + + L
Sbjct: 1580 ISLIVD----SVEEGDLGNYS----CYVENGNGRRHASVLLHKRELMYTVELAGGLGAIL 1735
Query: 350 XXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLYPK------NRESCLY 403
+YK +KI+I+L+YR+ H + D K YDAY+ Y K N+E+
Sbjct: 1736 LLLVCLVTIYKCYKIEIMLFYRN--HFGAEELDGDNKDYDAYLSYTKVDPDQWNQET--G 1903
Query: 404 SSDIFALKILPEVLERQCGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCY 463
+ FAL+ILP++LE+ GY LFI R+ + I+ + QS+R+II++ P Y
Sbjct: 1904 EEERFALEILPDMLEKHYGYKLFIPDRDLIPTGTYIEDVARCVDQSKRLIIVMTPN---Y 2074
Query: 464 GILEDAS--EKHLAVYNALIQDGXXXXXXXXXXXXDYANMP--ESIKYVKQKYGAIRWTG 519
+ S E + N L+ N E++K+ + I+W G
Sbjct: 2075 VVRRGWSIFELETRLRNMLVTGEIKVILIECSELRGIMNYQEVEALKHTIKLLTVIKWHG 2254
Query: 520 DFSERSHSASTRFWKKVRYHMPSRK 544
+ + +++FWK+++Y MP ++
Sbjct: 2255 ---PKCNKLNSKFWKRLQYEMPFKR 2320
>ref|NM_014271.1| Homo sapiens interleukin 1 receptor accessory protein-like 1
(IL1RAPL1), mRNA
Length = 3504
Score = 167 bits (422), Expect = 3e-39
Identities = 150/565 (26%), Positives = 250/565 (43%), Gaps = 42/565 (7%)
Frame = +1
Query: 22 SAEECV-----ICNYFVLVGEPTAISCPVITLPMLHSDYNLT--------WYRNGS---- 64
SA+ C I Y VLVGEP I C + + ++Y+L WY++
Sbjct: 589 SADGCTDWSIDIKKYQVLVGEPVRIKCALF-YGYIRTNYSLAQSAGLSLMWYKSSGPGDF 765
Query: 65 NMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCF 124
PI + +R+ + + +WF P L+DSGLY C +R+ + I+L V +ND GLC+
Sbjct: 766 EEPIAFDG-SRMSKEEDSIWFRPTLLQDSGLYACVIRNSTYCMKVSISLTVGENDTGLCY 942
Query: 125 NGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENA 184
N +MKY + + + + +I C D+E+F PEI WYKEC++ + R + +
Sbjct: 943 NSKMKYFEKAELSKSKEISCRDIEDFLLPTR-EPEILWYKECRT---KTWRPSIVFKRDT 1110
Query: 185 ILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTI---E 241
+LI V D GNYTC + Y + V RT L V P+ +YP + + E
Sbjct: 1111 LLIREVREDDIGNYTCELKY----GGFVVRRTTELTVTAPLTDKPPKLLYPMESKLTIQE 1278
Query: 242 VELGSHVVMECNVSSGVYG---LLPYWQVNDEDVDSFDST---------YREQFYEEGMP 289
+LG + C G G L YW ++ ++ D +E E+ +
Sbjct: 1279 TQLGDSANLTCRAFFGYSGDVSPLIYWMKGEKFIEDLDENRVWESDIRILKEHLGEQEVS 1458
Query: 290 HGIAVSGTKFNISEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXX 349
+ V ++ E L +Y+ C+ + + + L
Sbjct: 1459 ISLIVD----SVEEGDLGNYS----CYVENGNGRRHASVLLHKRELMYTVELAGGLGAIL 1614
Query: 350 XXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLYPK------NRESCLY 403
+YK +KI+I+L+YR+ H + D K YDAY+ Y K N+E+
Sbjct: 1615 LLLVCLVTIYKCYKIEIMLFYRN--HFGAEELDGDNKDYDAYLSYTKVDPDQWNQET--G 1782
Query: 404 SSDIFALKILPEVLERQCGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCY 463
+ FAL+ILP++LE+ GY LFI R+ + I+ + QS+R+II++ P Y
Sbjct: 1783 EEERFALEILPDMLEKHYGYKLFIPDRDLIPTGTYIEDVARCVDQSKRLIIVMTPN---Y 1953
Query: 464 GILEDAS--EKHLAVYNALIQDGXXXXXXXXXXXXDYANMP--ESIKYVKQKYGAIRWTG 519
+ S E + N L+ N E++K+ + I+W G
Sbjct: 1954 VVRRGWSIFELETRLRNMLVTGEIKVILIECSELRGIMNYQEVEALKHTIKLLTVIKWHG 2133
Query: 520 DFSERSHSASTRFWKKVRYHMPSRK 544
+ + +++FWK+++Y MP ++
Sbjct: 2134 ---PKCNKLNSKFWKRLQYEMPFKR 2199
>emb|AJ243874.1|HSA243874 Homo sapiens mRNA for oligophrenin-4 (OPHN4 gene)
Length = 3504
Score = 167 bits (422), Expect = 3e-39
Identities = 150/565 (26%), Positives = 250/565 (43%), Gaps = 42/565 (7%)
Frame = +1
Query: 22 SAEECV-----ICNYFVLVGEPTAISCPVITLPMLHSDYNLT--------WYRNGS---- 64
SA+ C I Y VLVGEP I C + + ++Y+L WY++
Sbjct: 589 SADGCTDWSIDIKKYQVLVGEPVRIKCALF-YGYIRTNYSLAQSAGLSLMWYKSSGPGDF 765
Query: 65 NMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCF 124
PI + +R+ + + +WF P L+DSGLY C +R+ + I+L V +ND GLC+
Sbjct: 766 EEPIAFDG-SRMSKEEDSIWFRPTLLQDSGLYACVIRNSTYCMKVSISLTVGENDTGLCY 942
Query: 125 NGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENA 184
N +MKY + + + + +I C D+E+F PEI WYKEC++ + R + +
Sbjct: 943 NSKMKYFEKAELSKSKEISCRDIEDFLLPTR-EPEILWYKECRT---KTWRPSIVFKRDT 1110
Query: 185 ILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTI---E 241
+LI V D GNYTC + Y + V RT L V P+ +YP + + E
Sbjct: 1111 LLIREVREDDIGNYTCELKY----GGFVVRRTTELTVTAPLTDKPPKLLYPMESKLTIQE 1278
Query: 242 VELGSHVVMECNVSSGVYG---LLPYWQVNDEDVDSFDST---------YREQFYEEGMP 289
+LG + C G G L YW ++ ++ D +E E+ +
Sbjct: 1279 TQLGDSANLTCRAFFGYSGDVSPLIYWMKGEKFIEDLDENRVWESDIRILKEHLGEQEVS 1458
Query: 290 HGIAVSGTKFNISEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXX 349
+ V ++ E L +Y+ C+ + + + L
Sbjct: 1459 ISLIVD----SVEEGDLGNYS----CYVENGNGRRHASVLLHKRELMYTVELAGGLGAIL 1614
Query: 350 XXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLYPK------NRESCLY 403
+YK +KI+I+L+YR+ H + D K YDAY+ Y K N+E+
Sbjct: 1615 LLLVCLVTIYKCYKIEIMLFYRN--HFGAEELDGDNKDYDAYLSYTKVDPDQWNQET--G 1782
Query: 404 SSDIFALKILPEVLERQCGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCY 463
+ FAL+ILP++LE+ GY LFI R+ + I+ + QS+R+II++ P Y
Sbjct: 1783 EEERFALEILPDMLEKHYGYKLFIPDRDLIPTGTYIEDVARCVDQSKRLIIVMTPN---Y 1953
Query: 464 GILEDAS--EKHLAVYNALIQDGXXXXXXXXXXXXDYANMP--ESIKYVKQKYGAIRWTG 519
+ S E + N L+ N E++K+ + I+W G
Sbjct: 1954 VVRRGWSIFELETRLRNMLVTGEIKVILIECSELRGIMNYQEVEALKHTIKLLTVIKWHG 2133
Query: 520 DFSERSHSASTRFWKKVRYHMPSRK 544
+ + +++FWK+++Y MP ++
Sbjct: 2134 ---PKCNKLNSKFWKRLQYEMPFKR 2199
>gb|AF284435.1|AF284435 Homo sapiens TIGIRR-2 mRNA, complete cds
Length = 2258
Score = 167 bits (422), Expect = 3e-39
Identities = 150/565 (26%), Positives = 250/565 (43%), Gaps = 42/565 (7%)
Frame = +1
Query: 22 SAEECV-----ICNYFVLVGEPTAISCPVITLPMLHSDYNLT--------WYRNGS---- 64
SA+ C I Y VLVGEP I C + + ++Y+L WY++
Sbjct: 166 SADGCTDWSIDIKKYQVLVGEPVRIKCALF-YGYIRTNYSLAQSAGLSLMWYKSSGPGDF 342
Query: 65 NMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCF 124
PI + +R+ + + +WF P L+DSGLY C +R+ + I+L V +ND GLC+
Sbjct: 343 EEPIAFDG-SRMSKEEDSIWFRPTLLQDSGLYACVIRNSTYCMKVSISLTVGENDTGLCY 519
Query: 125 NGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENA 184
N +MKY + + + + +I C D+E+F PEI WYKEC++ + R + +
Sbjct: 520 NSKMKYFEKAELSKSKEISCRDIEDFLLPTR-EPEILWYKECRT---KTWRPSIVFKRDT 687
Query: 185 ILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTI---E 241
+LI V D GNYTC + Y + V RT L V P+ +YP + + E
Sbjct: 688 LLIREVREDDIGNYTCELKY----GGFVVRRTTELTVTAPLTDKPPKLLYPMESKLTIQE 855
Query: 242 VELGSHVVMECNVSSGVYG---LLPYWQVNDEDVDSFDST---------YREQFYEEGMP 289
+LG + C G G L YW ++ ++ D +E E+ +
Sbjct: 856 TQLGDSANLTCRAFFGYSGDVSPLIYWMKGEKFIEDLDENRVWESDIRILKEHLGEQEVS 1035
Query: 290 HGIAVSGTKFNISEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXXXXXXXX 349
+ V ++ E L +Y+ C+ + + + L
Sbjct: 1036ISLIVD----SVEEGDLGNYS----CYVENGNGRRHASVLLHKRELMYTVELAGGLGAIL 1191
Query: 350 XXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLYPK------NRESCLY 403
+YK +KI+I+L+YR+ H + D K YDAY+ Y K N+E+
Sbjct: 1192LLLVCLVTIYKCYKIEIMLFYRN--HFGAEELDGDNKDYDAYLSYTKVDPDQWNQET--G 1359
Query: 404 SSDIFALKILPEVLERQCGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCY 463
+ FAL+ILP++LE+ GY LFI R+ + I+ + QS+R+II++ P Y
Sbjct: 1360EEERFALEILPDMLEKHYGYKLFIPDRDLIPTGTYIEDVARCVDQSKRLIIVMTPN---Y 1530
Query: 464 GILEDAS--EKHLAVYNALIQDGXXXXXXXXXXXXDYANMP--ESIKYVKQKYGAIRWTG 519
+ S E + N L+ N E++K+ + I+W G
Sbjct: 1531VVRRGWSIFELETRLRNMLVTGEIKVILIECSELRGIMNYQEVEALKHTIKLLTVIKWHG 1710
Query: 520 DFSERSHSASTRFWKKVRYHMPSRK 544
+ + +++FWK+++Y MP ++
Sbjct: 1711---PKCNKLNSKFWKRLQYEMPFKR 1776
>ref|NM_008364.1| Mus musculus interleukin 1 receptor accessory protein (Il1rap),
mRNA
Length = 3355
Score = 150 bits (379), Expect = 3e-34
Identities = 142/545 (26%), Positives = 230/545 (42%), Gaps = 33/545 (6%)
Frame = +3
Query: 33 VLVGEPTAISCPVITLPMLH-------SDYNLTWY--RNGSNMPITTERRA---RIHQRK 80
V EP I CP+ + + S L WY R ++ R RI + K
Sbjct: 243 VFEDEPARIKCPLFEHFLKYNYSTAHSSGLTLIWYWTRQDRDLEEPINFRLPENRISKEK 422
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKY--DQIVKSAN 138
+LWF P L D+G Y C +R+ + L+V + D+ CFN M++ ++
Sbjct: 423 DVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDS--CFNSAMRFPVHKMYIEHG 596
Query: 139 AGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNY 198
KI CP+++ + ++ P + WYK C + D VL EG N + + + + GNY
Sbjct: 597 IHKITCPNVDGY-FPSSVKPSVTWYKGCTE--IVDFHNVLPEGMNLSFFIPL-VSNNGNY 764
Query: 199 TCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTI--EVELGSHVVMECNVSS 256
TC + Y G+ ++++RT+ ++V SP P IY N+ + E E G +V+ C V
Sbjct: 765 TCVVTYPENGRLFHLTRTVTVKVVGSPKDALPPQIYSPNDRVVYEKEPGEELVIPCKV-- 938
Query: 257 GVYGLL------PYWQVNDEDVD--SFDSTYREQFYEEGMPHGIAVSGTK-------FNI 301
+ + +W ++ + D + D T E ++ S T+ +I
Sbjct: 939 -YFSFIMDSHNEVWWTIDGKKPDDVTVDITINE---------SVSYSSTEDETRTQILSI 1088
Query: 302 SEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPV--QNXXXXXXXXXXXXXXXXXXXXXVY 359
+V +D + CH E K++ V VY
Sbjct: 1089KKVTPEDLRRNYVCHARNTKGEAEQAAKVKQKVIPPRYTVELACGFGATVFLVVVLIVVY 1268
Query: 360 KIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLYPKNRESCLYSSDIFALKILPEVLER 419
++ +++VL+YR+ H + + DGK YD YV Y +N E + F L L VLE
Sbjct: 1269HVYWLEMVLFYRA--HFGTDETILDGKEYDIYVSYARNVE-----EEEFVLLTLRGVLEN 1427
Query: 420 QCGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNA 479
+ GY L IF R+ L G V D T I +SRR++++L P G + E + N
Sbjct: 1428EFGYKLCIFDRDSLPGGIVTDETLSFIQKSRRLLVVLSPNYVLQG-TQALLELKAGLENM 1604
Query: 480 LIQDGXXXXXXXXXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYH 539
+ D + +K K I+W G E+S RFWK+++
Sbjct: 1605ASRGNINVILVQYKAVKDM--KVKELKRAKTVLTVIKWKG---EKSKYPQGRFWKQLQVA 1769
Query: 540 MPSRK 544
MP +K
Sbjct: 1770MPVKK 1784
>emb|X85999.1|MMIL1RACP M.musculus mRNA for interleukin 1 receptor accessory protein
Length = 3355
Score = 150 bits (379), Expect = 3e-34
Identities = 142/545 (26%), Positives = 230/545 (42%), Gaps = 33/545 (6%)
Frame = +3
Query: 33 VLVGEPTAISCPVITLPMLH-------SDYNLTWY--RNGSNMPITTERRA---RIHQRK 80
V EP I CP+ + + S L WY R ++ R RI + K
Sbjct: 243 VFEDEPARIKCPLFEHFLKYNYSTAHSSGLTLIWYWTRQDRDLEEPINFRLPENRISKEK 422
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKY--DQIVKSAN 138
+LWF P L D+G Y C +R+ + L+V + D+ CFN M++ ++
Sbjct: 423 DVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDS--CFNSAMRFPVHKMYIEHG 596
Query: 139 AGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNY 198
KI CP+++ + ++ P + WYK C + D VL EG N + + + + GNY
Sbjct: 597 IHKITCPNVDGY-FPSSVKPSVTWYKGCTE--IVDFHNVLPEGMNLSFFIPL-VSNNGNY 764
Query: 199 TCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTI--EVELGSHVVMECNVSS 256
TC + Y G+ ++++RT+ ++V SP P IY N+ + E E G +V+ C V
Sbjct: 765 TCVVTYPENGRLFHLTRTVTVKVVGSPKDALPPQIYSPNDRVVYEKEPGEELVIPCKV-- 938
Query: 257 GVYGLL------PYWQVNDEDVD--SFDSTYREQFYEEGMPHGIAVSGTK-------FNI 301
+ + +W ++ + D + D T E ++ S T+ +I
Sbjct: 939 -YFSFIMDSHNEVWWTIDGKKPDDVTVDITINE---------SVSYSSTEDETRTQILSI 1088
Query: 302 SEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPV--QNXXXXXXXXXXXXXXXXXXXXXVY 359
+V +D + CH E K++ V VY
Sbjct: 1089KKVTPEDLRRNYVCHARNTKGEAEQAAKVKQKVIPPRYTVELACGFGATVFLVVVLIVVY 1268
Query: 360 KIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLYPKNRESCLYSSDIFALKILPEVLER 419
++ +++VL+YR+ H + + DGK YD YV Y +N E + F L L VLE
Sbjct: 1269HVYWLEMVLFYRA--HFGTDETILDGKEYDIYVSYARNVE-----EEEFVLLTLRGVLEN 1427
Query: 420 QCGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNA 479
+ GY L IF R+ L G V D T I +SRR++++L P G + E + N
Sbjct: 1428EFGYKLCIFDRDSLPGGIVTDETLSFIQKSRRLLVVLSPNYVLQG-TQALLELKAGLENM 1604
Query: 480 LIQDGXXXXXXXXXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYH 539
+ D + +K K I+W G E+S RFWK+++
Sbjct: 1605ASRGNINVILVQYKAVKDM--KVKELKRAKTVLTVIKWKG---EKSKYPQGRFWKQLQVA 1769
Query: 540 MPSRK 544
MP +K
Sbjct: 1770MPVKK 1784
>ref|NM_002182.1| Homo sapiens interleukin 1 receptor accessory protein (IL1RAP),
mRNA
Length = 4724
Score = 149 bits (377), Expect = 5e-34
Identities = 141/539 (26%), Positives = 228/539 (42%), Gaps = 27/539 (5%)
Frame = +3
Query: 33 VLVGEPTAISCPVI------TLPMLHS-DYNLTWY--RNGSNMPITTERRA---RIHQRK 80
V EP I CP+ HS L WY R ++ R RI + K
Sbjct: 315 VFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEK 494
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYD--QIVKSAN 138
+LWF P L D+G Y C +R+ + L+V + D+ CFN MK ++
Sbjct: 495 DVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDS--CFNSPMKLPVHKLYIEYG 668
Query: 139 AGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNY 198
+I CP+++ + ++ P I WY C +++ V+ EG N ++ + I + GNY
Sbjct: 669 IQRITCPNVDGYFPS-SVKPTITWYMGCYK--IQNFNNVIPEGMNLSFLIAL-ISNNGNY 836
Query: 199 TCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIY-PNNNTI-EVELGSHVVMECNVSS 256
TC + Y G+ ++++RT+ ++V SP P I+ PN++ + E E G +++ C V
Sbjct: 837 TCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTV-- 1010
Query: 257 GVYGLLP------YWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTK---FNISEVKLK 307
+ L +W ++ + D + E + H T+ +I +V +
Sbjct: 1011-YFSFLMDSRNEVWWTIDGKKPDDITI---DVTINESISHSRTEDETRTQILSIKKVTSE 1178
Query: 308 DYAYKFFCHFIYDSQEFTSYIKLEH--PVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKID 365
D + CH E K++ P VY ++ ++
Sbjct: 1179DLKRSYVCHARSAKGEVAKAAKVKQKVPAPRYTVELACGFGATVLLVVILIVVYHVYWLE 1358
Query: 366 IVLWYRSSCHPLLGKKVSDGKIYDAYVLYPKNRESCLYSSDIFALKILPEVLERQCGYNL 425
+VL+YR+ H + + DGK YD YV Y +N E + F L L VLE + GY L
Sbjct: 1359MVLFYRA--HFGTDETILDGKEYDIYVSYARNAEE-----EEFVLLTLRGVLENEFGYKL 1517
Query: 426 FIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGX 485
IF R+ L G V D T I +SRR++++L P G A + A + G
Sbjct: 1518CIFDRDSLPGGIVTDETLSFIQKSRRLLVVLSPNYVLQG--TQALLELKAGLENMASRGN 1691
Query: 486 XXXXXXXXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRK 544
+ E +K K I+W G E+S RFWK+++ MP +K
Sbjct: 1692INVILVQYKAVKETKVKE-LKRAKTVLTVIKWKG---EKSKYPQGRFWKQLQVAMPVKK 1856
>dbj|AB006537.1|AB006537 Homo sapiens mRNA for interleukin 1 receptor accessory protein,
complete cds
Length = 4724
Score = 149 bits (377), Expect = 5e-34
Identities = 141/539 (26%), Positives = 228/539 (42%), Gaps = 27/539 (5%)
Frame = +3
Query: 33 VLVGEPTAISCPVI------TLPMLHS-DYNLTWY--RNGSNMPITTERRA---RIHQRK 80
V EP I CP+ HS L WY R ++ R RI + K
Sbjct: 315 VFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEK 494
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYD--QIVKSAN 138
+LWF P L D+G Y C +R+ + L+V + D+ CFN MK ++
Sbjct: 495 DVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDS--CFNSPMKLPVHKLYIEYG 668
Query: 139 AGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNY 198
+I CP+++ + ++ P I WY C +++ V+ EG N ++ + I + GNY
Sbjct: 669 IQRITCPNVDGYFPS-SVKPTITWYMGCYK--IQNFNNVIPEGMNLSFLIAL-ISNNGNY 836
Query: 199 TCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIY-PNNNTI-EVELGSHVVMECNVSS 256
TC + Y G+ ++++RT+ ++V SP P I+ PN++ + E E G +++ C V
Sbjct: 837 TCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTV-- 1010
Query: 257 GVYGLLP------YWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTK---FNISEVKLK 307
+ L +W ++ + D + E + H T+ +I +V +
Sbjct: 1011-YFSFLMDSRNEVWWTIDGKKPDDITI---DVTINESISHSRTEDETRTQILSIKKVTSE 1178
Query: 308 DYAYKFFCHFIYDSQEFTSYIKLEH--PVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKID 365
D + CH E K++ P VY ++ ++
Sbjct: 1179DLKRSYVCHARSAKGEVAKAAKVKQKVPAPRYTVELACGFGATVLLVVILIVVYHVYWLE 1358
Query: 366 IVLWYRSSCHPLLGKKVSDGKIYDAYVLYPKNRESCLYSSDIFALKILPEVLERQCGYNL 425
+VL+YR+ H + + DGK YD YV Y +N E + F L L VLE + GY L
Sbjct: 1359MVLFYRA--HFGTDETILDGKEYDIYVSYARNAEE-----EEFVLLTLRGVLENEFGYKL 1517
Query: 426 FIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGX 485
IF R+ L G V D T I +SRR++++L P G A + A + G
Sbjct: 1518CIFDRDSLPGGIVTDETLSFIQKSRRLLVVLSPNYVLQG--TQALLELKAGLENMASRGN 1691
Query: 486 XXXXXXXXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRK 544
+ E +K K I+W G E+S RFWK+++ MP +K
Sbjct: 1692INVILVQYKAVKETKVKE-LKRAKTVLTVIKWKG---EKSKYPQGRFWKQLQVAMPVKK 1856
>gb|AF029213.1|AF029213 Homo sapiens IL-1 receptor accessory protein mRNA, complete cds
Length = 1740
Score = 149 bits (377), Expect = 5e-34
Identities = 141/539 (26%), Positives = 228/539 (42%), Gaps = 27/539 (5%)
Frame = +1
Query: 33 VLVGEPTAISCPVI------TLPMLHS-DYNLTWY--RNGSNMPITTERRA---RIHQRK 80
V EP I CP+ HS L WY R ++ R RI + K
Sbjct: 118 VFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEK 297
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYD--QIVKSAN 138
+LWF P L D+G Y C +R+ + L+V + D+ CFN MK ++
Sbjct: 298 DVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDS--CFNSPMKLPVHKLYIEYG 471
Query: 139 AGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNY 198
+I CP+++ + ++ P I WY C +++ V+ EG N ++ + I + GNY
Sbjct: 472 IQRITCPNVDGYFPS-SVKPTITWYMGCYK--IQNFNNVIPEGMNLSFLIAL-ISNNGNY 639
Query: 199 TCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIY-PNNNTI-EVELGSHVVMECNVSS 256
TC + Y G+ ++++RT+ ++V SP P I+ PN++ + E E G +++ C V
Sbjct: 640 TCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTV-- 813
Query: 257 GVYGLLP------YWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTK---FNISEVKLK 307
+ L +W ++ + D + E + H T+ +I +V +
Sbjct: 814 -YFSFLMDSRNEVWWTIDGKKPDDITI---DVTINESISHSRTEDETRTQILSIKKVTSE 981
Query: 308 DYAYKFFCHFIYDSQEFTSYIKLEH--PVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKID 365
D + CH E K++ P VY ++ ++
Sbjct: 982 DLKRSYVCHARSAKGEVAKAAKVKQKVPAPRYTVELACGFGATVLLVVILIVVYHVYWLE 1161
Query: 366 IVLWYRSSCHPLLGKKVSDGKIYDAYVLYPKNRESCLYSSDIFALKILPEVLERQCGYNL 425
+VL+YR+ H + + DGK YD YV Y +N E + F L L VLE + GY L
Sbjct: 1162MVLFYRA--HFGTDETILDGKEYDIYVSYARNAEE-----EEFVLLTLRGVLENEFGYKL 1320
Query: 426 FIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGX 485
IF R+ L G V D T I +SRR++++L P G A + A + G
Sbjct: 1321CIFDRDSLPGGIVTDETLSFIQKSRRLLVVLSPNYVLQG--TQALLELKAGLENMASRGN 1494
Query: 486 XXXXXXXXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRK 544
+ E +K K I+W G E+S RFWK+++ MP +K
Sbjct: 1495INVILVQYKAVKETKVKE-LKRAKTVLTVIKWKG---EKSKYPQGRFWKQLQVAMPVKK 1659
>ref|NM_003855.1| Homo sapiens interleukin 18 receptor 1 (IL18R1), mRNA
Length = 3522
Score = 143 bits (360), Expect = 5e-32
Identities = 131/532 (24%), Positives = 229/532 (42%), Gaps = 10/532 (1%)
Frame = +1
Query: 22 SAEECVICNYFVLV-GEPTAISCPVITLPMLHSDYNLTWYRNGSN---MPITTERRARIH 77
+AE C + +V GEP + +L +WY++ + + + +RI
Sbjct: 76 TAESCTSRPHITVVEGEPFYLKHCSCSLAHEIETTTKSWYKSSGSQEHVELNPRSSSRIA 255
Query: 78 QRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSA 137
+L F P L D+G Y ++++ + + L V + + CF +IV+
Sbjct: 256 LHDCVLEFWPVELNDTGSYFFQMKNYTQKWK----LNVIRRNKHSCFTERQVTSKIVEVK 423
Query: 138 NAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGN 197
+I C EN + +N YK CK +L+L +N + N +D+G
Sbjct: 424 KFFQITC---ENSYYQTLVN-STSLYKNCK-------KLLLENNKNPTIKKNAEFEDQGY 570
Query: 198 YTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSG 257
Y+C + GK +N+++T N+ + E + P + P N + VELG +V + C+
Sbjct: 571 YSCVHFLHHNGKLFNITKTFNITIVEDRSNIVPVLLGPKLNHVAVELGKNVRLNCSALLN 750
Query: 258 VYGLLPYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHF 317
++ YW +E+ S + + E+ P G + I + + + C
Sbjct: 751 EEDVI-YWMFGEEN-GSDPNIHEEKEMRIMTPEGKWHASKVLRIENIGESNLNVLYNCTV 924
Query: 318 IY----DSQEFTSYIKLEHP--VQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWYR 371
D++ F K + + V I+++D+VL+YR
Sbjct: 925 ASTGGTDTKSFILVRKADMADIPGHVFTRGMIIAVLILVAVVCLVTVCVIYRVDLVLFYR 1104
Query: 372 SSCHPLLGKKVSDGKIYDAYVLYPKNRESCLYSSDIFALKILPEVLERQCGYNLFIFGRN 431
+ ++DGK YDA+V Y K FA++ILP VLE+ GY L IF R+
Sbjct: 1105HLTRR--DETLTDGKTYDAFVSYLKECRPENGEEHTFAVEILPRVLEKHFGYKLCIFERD 1278
Query: 432 DLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXX 491
+ G AV+D I +SRR+II+L Y E E ++ AL++
Sbjct: 1279VVPGGAVVDEIHSLIEKSRRLIIVL---SKSYMSNEVRYELESGLHEALVERKIKIILIE 1449
Query: 492 XXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSR 543
D+ +P+S+K +K + ++W D +S S ++RFWK + Y MP++
Sbjct: 1450FTPVTDFTFLPQSLKLLK-SHRVLKWKAD---KSLSYNSRFWKNLLYLMPAK 1593
>gb|U43672.1|HSU43672 Human putative transmembrane receptor IL-1Rrp mRNA, complete cds
Length = 3522
Score = 143 bits (360), Expect = 5e-32
Identities = 131/532 (24%), Positives = 229/532 (42%), Gaps = 10/532 (1%)
Frame = +1
Query: 22 SAEECVICNYFVLV-GEPTAISCPVITLPMLHSDYNLTWYRNGSN---MPITTERRARIH 77
+AE C + +V GEP + +L +WY++ + + + +RI
Sbjct: 76 TAESCTSRPHITVVEGEPFYLKHCSCSLAHEIETTTKSWYKSSGSQEHVELNPRSSSRIA 255
Query: 78 QRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSA 137
+L F P L D+G Y ++++ + + L V + + CF +IV+
Sbjct: 256 LHDCVLEFWPVELNDTGSYFFQMKNYTQKWK----LNVIRRNKHSCFTERQVTSKIVEVK 423
Query: 138 NAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGN 197
+I C EN + +N YK CK +L+L +N + N +D+G
Sbjct: 424 KFFQITC---ENSYYQTLVN-STSLYKNCK-------KLLLENNKNPTIKKNAEFEDQGY 570
Query: 198 YTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSG 257
Y+C + GK +N+++T N+ + E + P + P N + VELG +V + C+
Sbjct: 571 YSCVHFLHHNGKLFNITKTFNITIVEDRSNIVPVLLGPKLNHVAVELGKNVRLNCSALLN 750
Query: 258 VYGLLPYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHF 317
++ YW +E+ S + + E+ P G + I + + + C
Sbjct: 751 EEDVI-YWMFGEEN-GSDPNIHEEKEMRIMTPEGKWHASKVLRIENIGESNLNVLYNCTV 924
Query: 318 IY----DSQEFTSYIKLEHP--VQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWYR 371
D++ F K + + V I+++D+VL+YR
Sbjct: 925 ASTGGTDTKSFILVRKADMADIPGHVFTRGMIIAVLILVAVVCLVTVCVIYRVDLVLFYR 1104
Query: 372 SSCHPLLGKKVSDGKIYDAYVLYPKNRESCLYSSDIFALKILPEVLERQCGYNLFIFGRN 431
+ ++DGK YDA+V Y K FA++ILP VLE+ GY L IF R+
Sbjct: 1105HLTRR--DETLTDGKTYDAFVSYLKECRPENGEEHTFAVEILPRVLEKHFGYKLCIFERD 1278
Query: 432 DLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXX 491
+ G AV+D I +SRR+II+L Y E E ++ AL++
Sbjct: 1279VVPGGAVVDEIHSLIEKSRRLIIVL---SKSYMSNEVRYELESGLHEALVERKIKIILIE 1449
Query: 492 XXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSR 543
D+ +P+S+K +K + ++W D +S S ++RFWK + Y MP++
Sbjct: 1450FTPVTDFTFLPQSLKLLK-SHRVLKWKAD---KSLSYNSRFWKNLLYLMPAK 1593
>gb|U48592.1|RNU48592 Rattus norvegicus interleukin-1 receptor accessory protein (IL-1)
mRNA, complete cds
Length = 1862
Score = 141 bits (356), Expect = 1e-31
Identities = 138/545 (25%), Positives = 225/545 (40%), Gaps = 33/545 (6%)
Frame = +1
Query: 33 VLVGEPTAISCPVITLPMLH-------SDYNLTWY--RNGSNMPITTERRA---RIHQRK 80
V EP I CP+ + + S L WY R ++ R RI + K
Sbjct: 211 VFEDEPARIKCPLFEHFLKYNYSTAHSSGLTLIWYWTRQDRDLEEPINFRLPENRISKEK 390
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYD--QIVKSAN 138
+LWF P L D+G Y C +R+ + L+V + D+ CFN M+ ++
Sbjct: 391 DVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDS--CFNSPMRLPVHRLYIEQG 564
Query: 139 AGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNY 198
I CP+++ + ++ P + WYK C + + V +G N + + + + GNY
Sbjct: 565 IHNITCPNVDGYFPS-SVKPSVTWYKGCTE--IVNFHNVQPKGMNLSFFIPL-VSNNGNY 732
Query: 199 TCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTI--EVELGSHVVMECNVSS 256
TC + Y G+ ++++RTM ++V SP P IY N+ + E E G +V+ C V
Sbjct: 733 TCVVTYLENGRLFHLTRTMTVKVVGSPKDAVPPHIYSPNDRVVYEKEPGEELVIPCKV-- 906
Query: 257 GVYGLLP------YWQVNDEDVDS--FDSTYREQFYEEGMPHGIAVSGTK-------FNI 301
+ + +W ++ + D D T E ++ S T+ +I
Sbjct: 907 -YFSFIMDSHNEIWWTIDGKKPDDVPVDITIIE---------SVSYSSTEDETRTQILSI 1056
Query: 302 SEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPV--QNXXXXXXXXXXXXXXXXXXXXXVY 359
+V +D + CH E K++ V VY
Sbjct: 1057KKVTPEDLKRNYVCHARNAEGEAEQAAKVKQKVIPPRYTVELACGFGATVFLVVVLIVVY 1236
Query: 360 KIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLYPKNRESCLYSSDIFALKILPEVLER 419
++ +++VL+YR+ H + + DGK YD YV Y +N E + F L L VLE
Sbjct: 1237HVYWLEMVLFYRA--HFGTDETILDGKEYDIYVSYARNAE-----EEEFVLLTLRGVLEN 1395
Query: 420 QCGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNA 479
+ GY L IF R+ G V D T I +SRR++++L P G + E + N
Sbjct: 1396EFGYKLCIFDRDSFPGGIVTDETLSFIQKSRRLLVVLSPNYVLQG-TQALLELKAGLENM 1572
Query: 480 LIQDGXXXXXXXXXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYH 539
+ D + +K K I+W G E+S RFWK+++
Sbjct: 1573ASRGNINVILVQYKAVKDL--KVKELKRAKSVLTVIKWKG---EKSKYPQGRFWKQLQVA 1737
Query: 540 MPSRK 544
MP +K
Sbjct: 1738MPVKK 1752
>ref|NM_012968.1| Rattus norvegicus Interleukin 1 receptor accessory protein
(Il1rap), mRNA
Length = 1862
Score = 141 bits (356), Expect = 1e-31
Identities = 138/545 (25%), Positives = 225/545 (40%), Gaps = 33/545 (6%)
Frame = +1
Query: 33 VLVGEPTAISCPVITLPMLH-------SDYNLTWY--RNGSNMPITTERRA---RIHQRK 80
V EP I CP+ + + S L WY R ++ R RI + K
Sbjct: 211 VFEDEPARIKCPLFEHFLKYNYSTAHSSGLTLIWYWTRQDRDLEEPINFRLPENRISKEK 390
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYD--QIVKSAN 138
+LWF P L D+G Y C +R+ + L+V + D+ CFN M+ ++
Sbjct: 391 DVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDS--CFNSPMRLPVHRLYIEQG 564
Query: 139 AGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNY 198
I CP+++ + ++ P + WYK C + + V +G N + + + + GNY
Sbjct: 565 IHNITCPNVDGYFPS-SVKPSVTWYKGCTE--IVNFHNVQPKGMNLSFFIPL-VSNNGNY 732
Query: 199 TCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTI--EVELGSHVVMECNVSS 256
TC + Y G+ ++++RTM ++V SP P IY N+ + E E G +V+ C V
Sbjct: 733 TCVVTYLENGRLFHLTRTMTVKVVGSPKDAVPPHIYSPNDRVVYEKEPGEELVIPCKV-- 906
Query: 257 GVYGLLP------YWQVNDEDVDS--FDSTYREQFYEEGMPHGIAVSGTK-------FNI 301
+ + +W ++ + D D T E ++ S T+ +I
Sbjct: 907 -YFSFIMDSHNEIWWTIDGKKPDDVPVDITIIE---------SVSYSSTEDETRTQILSI 1056
Query: 302 SEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPV--QNXXXXXXXXXXXXXXXXXXXXXVY 359
+V +D + CH E K++ V VY
Sbjct: 1057KKVTPEDLKRNYVCHARNAEGEAEQAAKVKQKVIPPRYTVELACGFGATVFLVVVLIVVY 1236
Query: 360 KIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLYPKNRESCLYSSDIFALKILPEVLER 419
++ +++VL+YR+ H + + DGK YD YV Y +N E + F L L VLE
Sbjct: 1237HVYWLEMVLFYRA--HFGTDETILDGKEYDIYVSYARNAE-----EEEFVLLTLRGVLEN 1395
Query: 420 QCGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNA 479
+ GY L IF R+ G V D T I +SRR++++L P G + E + N
Sbjct: 1396EFGYKLCIFDRDSFPGGIVTDETLSFIQKSRRLLVVLSPNYVLQG-TQALLELKAGLENM 1572
Query: 480 LIQDGXXXXXXXXXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYH 539
+ D + +K K I+W G E+S RFWK+++
Sbjct: 1573ASRGNINVILVQYKAVKDL--KVKELKRAKSVLTVIKWKG---EKSKYPQGRFWKQLQVA 1737
Query: 540 MPSRK 544
MP +K
Sbjct: 1738MPVKK 1752
>gb|U64094.1|HSU64094 Human soluble type II interleukin-1 receptor mRNA, complete cds
Length = 1037
Score = 138 bits (347), Expect = 2e-30
Identities = 78/249 (31%), Positives = 129/249 (51%), Gaps = 6/249 (2%)
Frame = +2
Query: 32 FVLVGEPTAISCPVITLPMLHS---DYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPA 88
F L GEP A+ CP + + S NLTW++N S + E R+ + G LW +PA
Sbjct: 176 FRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPA 355
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
EDSG Y C R+ + + I L+VF+N + F + Y QI+ + +G ++CPDL
Sbjct: 356 LQEDSGTYVCTTRNASYCDKMSIELRVFENTD--AFLPFISYPQILTLSTSGVLVCPDLS 529
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
F D + +I WYK+ ++++ + G +L+ +V ++D G Y C + + + G
Sbjct: 530 EF-TRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEG 706
Query: 209 KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGV---YGLLPYW 265
+QYN++R++ L +K+ + P I P TI LGS + + C V G + +W
Sbjct: 707 QQYNITRSIELRIKKKKEETIPVIISP-LKTISASLGSRLTIPCKVFLGTGTPLTTMLWW 883
Query: 266 QVNDEDVDS 274
ND ++S
Sbjct: 884 TANDTHIES 910
>emb|X59770.1|HSIL1R2II H.sapiens IL-1R2 mRNA for type II interleukin-1 receptor, (cell
line CB23)
Length = 1308
Score = 138 bits (347), Expect = 2e-30
Identities = 78/249 (31%), Positives = 129/249 (51%), Gaps = 6/249 (2%)
Frame = +2
Query: 32 FVLVGEPTAISCPVITLPMLHS---DYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPA 88
F L GEP A+ CP + + S NLTW++N S + E R+ + G LW +PA
Sbjct: 176 FRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPA 355
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
EDSG Y C R+ + + I L+VF+N + F + Y QI+ + +G ++CPDL
Sbjct: 356 LQEDSGTYVCTTRNASYCDKMSIELRVFENTD--AFLPFISYPQILTLSTSGVLVCPDLS 529
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
F D + +I WYK+ ++++ + G +L+ +V ++D G Y C + + + G
Sbjct: 530 EF-TRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEG 706
Query: 209 KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGV---YGLLPYW 265
+QYN++R++ L +K+ + P I P TI LGS + + C V G + +W
Sbjct: 707 QQYNITRSIELRIKKKKEETIPVIISP-LKTISASLGSRLTIPCKVFLGTGTPLTTMLWW 883
Query: 266 QVNDEDVDS 274
ND ++S
Sbjct: 884 TANDTHIES 910
>ref|NM_004633.1| Homo sapiens interleukin 1 receptor, type II (IL1R2), mRNA
Length = 1286
Score = 138 bits (347), Expect = 2e-30
Identities = 78/249 (31%), Positives = 129/249 (51%), Gaps = 6/249 (2%)
Frame = +2
Query: 32 FVLVGEPTAISCPVITLPMLHS---DYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPA 88
F L GEP A+ CP + + S NLTW++N S + E R+ + G LW +PA
Sbjct: 176 FRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPA 355
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
EDSG Y C R+ + + I L+VF+N + F + Y QI+ + +G ++CPDL
Sbjct: 356 LQEDSGTYVCTTRNASYCDKMSIELRVFENTD--AFLPFISYPQILTLSTSGVLVCPDLS 529
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
F D + +I WYK+ ++++ + G +L+ +V ++D G Y C + + + G
Sbjct: 530 EF-TRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEG 706
Query: 209 KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGV---YGLLPYW 265
+QYN++R++ L +K+ + P I P TI LGS + + C V G + +W
Sbjct: 707 QQYNITRSIELRIKKKKEETIPVIISP-LKTISASLGSRLTIPCKVFLGTGTPLTTMLWW 883
Query: 266 QVNDEDVDS 274
ND ++S
Sbjct: 884 TANDTHIES 910
>gb|U64092.1|CGU64092 Cercopithecidae gen. sp. type II interleukin-1 receptor mRNA,
complete cds
Length = 1257
Score = 137 bits (345), Expect = 3e-30
Identities = 81/250 (32%), Positives = 128/250 (50%), Gaps = 7/250 (2%)
Frame = +3
Query: 32 FVLVGEPTAISCPVITLPMLHS---DYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPA 88
F L GEP A+ CP + + S NLTW++N S + E R+ + G LW +PA
Sbjct: 135 FRLEGEPVALRCPQVPYQLWASVSPHINLTWHKNDSARMVPGEEETRMWAQDGALWLLPA 314
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKN-DNGLCFNGEMKYDQIVKSANAGKIICPDL 147
EDSG Y C R+ + + I L+VF+N D L F + Y QI+ + G ++CPDL
Sbjct: 315 LQEDSGTYICTTRNASYCDKVSIELRVFENTDASLPF---ISYPQILTLSTFGVLVCPDL 485
Query: 148 ENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYM 207
F D + +I WYK+ ++++ + G +L+ +V ++D G Y C + + +
Sbjct: 486 REF-TRDKTDGKIQWYKDFLPLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHE 662
Query: 208 GKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGV---YGLLPY 264
G+QYN++R + L +K+ + P I P TI LGS + + C V G + +
Sbjct: 663 GQQYNITRNIELRIKKKKEETIPVIISP-LKTISASLGSRLTIPCKVFLGTGTPLTTMLW 839
Query: 265 WQVNDEDVDS 274
W ND V+S
Sbjct: 840 WTANDTHVES 869
>gb|U64093.1|CGU64093 Cercopithecidae gen. sp. soluble type II interleukin-1 receptor
mRNA, complete cds
Length = 1084
Score = 137 bits (345), Expect = 3e-30
Identities = 81/250 (32%), Positives = 128/250 (50%), Gaps = 7/250 (2%)
Frame = +3
Query: 32 FVLVGEPTAISCPVITLPMLHS---DYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPA 88
F L GEP A+ CP + + S NLTW++N S + E R+ + G LW +PA
Sbjct: 135 FRLEGEPVALRCPQVPYQLWASVSPHINLTWHKNDSARMVPGEEETRMWAQDGALWLLPA 314
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKN-DNGLCFNGEMKYDQIVKSANAGKIICPDL 147
EDSG Y C R+ + + I L+VF+N D L F + Y QI+ + G ++CPDL
Sbjct: 315 LQEDSGTYICTTRNASYCDKVSIELRVFENTDASLPF---ISYPQILTLSTFGVLVCPDL 485
Query: 148 ENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYM 207
F D + +I WYK+ ++++ + G +L+ +V ++D G Y C + + +
Sbjct: 486 REF-TRDKTDGKIQWYKDFLPLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHE 662
Query: 208 GKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGV---YGLLPY 264
G+QYN++R + L +K+ + P I P TI LGS + + C V G + +
Sbjct: 663 GQQYNITRNIELRIKKKKEETIPVIISP-LKTISASLGSRLTIPCKVFLGTGTPLTTMLW 839
Query: 265 WQVNDEDVDS 274
W ND V+S
Sbjct: 840 WTANDTHVES 869
>gb|U74649.1|HSU74649 Human interleukin-1 receptor type II mRNA, complete cds
Length = 1264
Score = 133 bits (335), Expect = 4e-29
Identities = 76/249 (30%), Positives = 127/249 (50%), Gaps = 6/249 (2%)
Frame = +3
Query: 32 FVLVGEPTAISCPVITLPMLHS---DYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPA 88
F L GEP A+ CP + + S NLTW++N S + E R+ + G LW +PA
Sbjct: 150 FRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPA 329
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
EDSG Y C R+ + + I +VF+N + F + Y QI+ + +G ++CPDL
Sbjct: 330 LQEDSGTYVCTTRNASYCDKMSIEFRVFENTD--AFLPFISYPQILTLSTSGVLVCPDLS 503
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
F D + +I WY++ ++++ + G +L+ +V +D G Y C + + + G
Sbjct: 504 EF-TRDKTDVKIQWYRDSLLLDKDNEKFLSVRGTTHLLVHDVAQEDAGYYRCVLTFAHEG 680
Query: 209 KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGV---YGLLPYW 265
+QYN++R++ L +K+ + P I P TI LGS + + C V G + +W
Sbjct: 681 QQYNITRSIELRIKKKKEETIPVIISP-LKTISASLGSRLTIPCKVFLGTGTPLTTMLWW 857
Query: 266 QVNDEDVDS 274
ND ++S
Sbjct: 858 TANDTHIES 884
>ref|NM_008365.1| Mus musculus interleukin 18 receptor 1 (Il18r1), mRNA
Length = 2830
Score = 132 bits (331), Expect = 1e-28
Identities = 130/531 (24%), Positives = 225/531 (41%), Gaps = 20/531 (3%)
Frame = +3
Query: 33 VLVGEPTAISCPVITLPMLHSDY-NLTWYRNGSN---MPITTERRARIHQRKGLLWFIPA 88
V+ GEP + I+ P+ ++ + W++ ++ + R+ L F P
Sbjct: 468 VVEGEPFYLKPCGISAPVHRNETATMRWFKGSASHEYRELNNRSSPRVTFHDHTLEFWPV 647
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
+ED G Y +V + R+ L V K + CF+ ++ + V+ + I C +
Sbjct: 648 EMEDEGTYISQVGNDRRNW----TLNVTKRNKHSCFSDKLVTSRDVEVNKSLHITCKN-- 809
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
+ + + + YK CK + +L + E D+G Y+C + G
Sbjct: 810 --PNYEELIQDTWLYKNCKE--ISKTPRILKDAE---------FGDEGYYSCVFSVHHNG 950
Query: 209 KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVN 268
+YN+++T+N+ V E K+ P + P + VELG V + C+ S L YW +
Sbjct: 951 TRYNITKTVNITVIEGRSKVTPAILGPKCEKVGVELGKDVELNCSASLNKDDLF-YWSIR 1127
Query: 269 DEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHFIY--------- 319
ED S D +E E +S K + S++ + + + +Y
Sbjct: 1128KED--SSDPNVQEDRKETTT----WISEGKLHASKILRFQKITENYLNVLYNCTVANEEA 1289
Query: 320 -DSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVY-KIFKIDIVLWYRSSCHPL 377
D++ F K + + I+K+D+VL+YR
Sbjct: 1290IDTKSFVLVRKEIPDIPGHVFTGGVTVLVLASVAAVCIVILCVIYKVDLVLFYRRIAER- 1466
Query: 378 LGKKVSDGKIYDAYVLY-----PKNRESCLYSSDIFALKILPEVLERQCGYNLFIFGRND 432
+ ++DGK YDA+V Y P+N+E FA++ LP VLE+Q GY L IF R+
Sbjct: 1467-DETLTDGKTYDAFVSYLKECHPENKEEYT-----FAVETLPRVLEKQFGYKLCIFERDV 1628
Query: 433 LAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXX 492
+ G AV++ I +SRR+II+L G E ++ AL++
Sbjct: 1629VPGGAVVEEIHSLIEKSRRLIIVLSQSYLTNGA---RRELESGLHEALVERKIKIILIEF 1799
Query: 493 XXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSR 543
+ +P S+K +K Y ++W D S S ++RFWK + Y MP++
Sbjct: 1800TPASNITFLPPSLKLLK-SYRVLKWRAD----SPSMNSRFWKNLVYLMPAK 1937
>gb|U43673.1|MMU43673 Mus musculus putative transmembrane receptor IL-1Rrp mRNA, complete
cds
Length = 2830
Score = 132 bits (331), Expect = 1e-28
Identities = 130/531 (24%), Positives = 225/531 (41%), Gaps = 20/531 (3%)
Frame = +3
Query: 33 VLVGEPTAISCPVITLPMLHSDY-NLTWYRNGSN---MPITTERRARIHQRKGLLWFIPA 88
V+ GEP + I+ P+ ++ + W++ ++ + R+ L F P
Sbjct: 468 VVEGEPFYLKPCGISAPVHRNETATMRWFKGSASHEYRELNNRSSPRVTFHDHTLEFWPV 647
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
+ED G Y +V + R+ L V K + CF+ ++ + V+ + I C +
Sbjct: 648 EMEDEGTYISQVGNDRRNW----TLNVTKRNKHSCFSDKLVTSRDVEVNKSLHITCKN-- 809
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
+ + + + YK CK + +L + E D+G Y+C + G
Sbjct: 810 --PNYEELIQDTWLYKNCKE--ISKTPRILKDAE---------FGDEGYYSCVFSVHHNG 950
Query: 209 KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVN 268
+YN+++T+N+ V E K+ P + P + VELG V + C+ S L YW +
Sbjct: 951 TRYNITKTVNITVIEGRSKVTPAILGPKCEKVGVELGKDVELNCSASLNKDDLF-YWSIR 1127
Query: 269 DEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHFIY--------- 319
ED S D +E E +S K + S++ + + + +Y
Sbjct: 1128KED--SSDPNVQEDRKETTT----WISEGKLHASKILRFQKITENYLNVLYNCTVANEEA 1289
Query: 320 -DSQEFTSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVY-KIFKIDIVLWYRSSCHPL 377
D++ F K + + I+K+D+VL+YR
Sbjct: 1290IDTKSFVLVRKEIPDIPGHVFTGGVTVLVLASVAAVCIVILCVIYKVDLVLFYRRIAER- 1466
Query: 378 LGKKVSDGKIYDAYVLY-----PKNRESCLYSSDIFALKILPEVLERQCGYNLFIFGRND 432
+ ++DGK YDA+V Y P+N+E FA++ LP VLE+Q GY L IF R+
Sbjct: 1467-DETLTDGKTYDAFVSYLKECHPENKEEYT-----FAVETLPRVLEKQFGYKLCIFERDV 1628
Query: 433 LAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXX 492
+ G AV++ I +SRR+II+L G E ++ AL++
Sbjct: 1629VPGGAVVEEIHSLIEKSRRLIIVLSQSYLTNGA---RRELESGLHEALVERKIKIILIEF 1799
Query: 493 XXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSR 543
+ +P S+K +K Y ++W D S S ++RFWK + Y MP++
Sbjct: 1800TPASNITFLPPSLKLLK-SYRVLKWRAD----SPSMNSRFWKNLVYLMPAK 1937
>gb|AC007271.3|AC007271 Homo sapiens BAC clone RP11-4B12 from 2, complete sequence
Length = 179954
Score = 122 bits (307), Expect = 7e-26
Identities = 59/118 (50%), Positives = 80/118 (67%)
Frame = -1
Query: 438 VIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXXXXD 497
+++V +E + +SRR+IIILV E S + L +SE+ +A+YNAL+QDG D
Sbjct: 51086 IVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQD 50907
Query: 498 YANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRKHGSSSGFHLSS 555
Y MPESIK++KQK+GAIRW+GDF++ SA TRFWK VRYHMP ++ SS L S
Sbjct: 50906 YEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQLLS 50733
Score = 75.9 bits (185), Expect = 1e-11
Identities = 36/64 (56%), Positives = 43/64 (66%), Gaps = 1/64 (1%)
Frame = -2
Query: 383 SDGKIYDAYVLYPKN-RESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLAGEAVIDV 441
SDGK YDAY+LYPK E DIF K+LPEVLE+QCGY LFI+GR+D GE + +
Sbjct: 51961 SDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEGMCVM 51782
Query: 442 TDEK 445
K
Sbjct: 51781 EQSK 51770
Score = 62.0 bits (149), Expect = 1e-07
Identities = 25/45 (55%), Positives = 34/45 (75%)
Frame = -2
Query: 57 LTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVR 101
+TWY++ S P++TE+ +RIHQ K LWF+PA +EDSG Y C VR
Sbjct: 62566 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVR 62432
Score = 51.2 bits (121), Expect = 3e-04
Identities = 22/72 (30%), Positives = 42/72 (57%)
Frame = -1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N + +P A +C P+ + ++TWY+N S +P++ ++RIHQ + + F+P
Sbjct: 38339 NEILSASQPFAFNCTFP--PITSGEVSVTWYKNSSKIPVSKIIQSRIHQDETWILFLPME 38166
Query: 90 LEDSGLYECEVR 101
DSG+Y+C ++
Sbjct: 38165 WGDSGVYQCVIK 38130
Score = 48.9 bits (115), Expect = 0.001
Identities = 20/54 (37%), Positives = 34/54 (62%)
Frame = -3
Query: 111 INLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYK 164
I+ K +N+ LC+N + + Q + A G ++CP +E FK+E+N P++ WYK
Sbjct: 62298 ISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYK 62137
Score = 46.6 bits (109), Expect = 0.006
Identities = 20/63 (31%), Positives = 38/63 (59%), Gaps = 6/63 (9%)
Frame = -1
Query: 161 HWYKECKSGFLEDKRLVLAEG------ENAILILNVTIQDKGNYTCRMVYTYMGKQYNVS 214
+W+ S F+ D + +L + ++ ++++NV + +GNYTC YTY+GKQY ++
Sbjct: 61364 YWFSMLLSPFI*DCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPIT 61185
Query: 215 RTM 217
R +
Sbjct: 61184 RVI 61176
Score = 41.6 bits (96), Expect = 0.20
Identities = 15/42 (35%), Positives = 27/42 (63%)
Frame = -2
Query: 182 ENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKE 223
E +L+ NV+ +D+GNY C+ + T+ GKQY V + + + +
Sbjct: 25846 ETRLLVSNVSAEDRGNYACQAILTHSGKQYEVLNGITVSISK 25721
Score = 40.4 bits (93), Expect = 0.45
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2
Query: 358 VYKIFKIDIVLWYRSSCHPLL 378
+YKIFKIDIVLWYR SC+ L
Sbjct: 52783 IYKIFKIDIVLWYRDSCYDFL 52721
>gb|BC012346.1|BC012346 Homo sapiens, Similar to interleukin 1 receptor, type II, clone
IMAGE:4562827, mRNA
Length = 1430
Score = 121 bits (304), Expect = 2e-25
Identities = 63/195 (32%), Positives = 107/195 (54%), Gaps = 3/195 (1%)
Frame = +2
Query: 32 FVLVGEPTAISCPVITLPMLHS---DYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPA 88
F L GEP A+ CP + + S NLTW++N S + E R+ + G LW +PA
Sbjct: 296 FRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPA 475
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
EDSG Y C R+ + + I L+VF+N + F + Y QI+ + +G ++CPDL
Sbjct: 476 LQEDSGTYVCTTRNASYCDKMSIELRVFENTD--AFLPFISYPQILTLSTSGVLVCPDLS 649
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
F D + +I WYK+ ++++ + G +L+ +V ++D G Y C + + + G
Sbjct: 650 EF-TRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEG 826
Query: 209 KQYNVSRTMNLEVKE 223
+QYN++R++ L +K+
Sbjct: 827 QQYNITRSIELRIKK 871
>emb|AJ277831.1|MMU277831 Mus musculus mRNA for IL1RAPL-2 related protein
Length = 2028
Score = 121 bits (304), Expect = 2e-25
Identities = 81/267 (30%), Positives = 132/267 (49%), Gaps = 16/267 (5%)
Frame = +3
Query: 31 YFVLVGEPTAISCPVITLPMLHSDYN--------LTWYRNGSNM--PITTERRARIHQRK 80
Y L GEP + C + + ++Y+ L WYRN ++ PI R+ + +
Sbjct: 999 YMALAGEPVRVKCALF-YSYIRTNYSMAQSTGLRLMWYRNKGDLEEPIIFSE-VRMSKEE 1172
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAG 140
+WF A +DSG Y C +R+ + ++L V +N++GLC+N ++Y + +
Sbjct: 1173 DAIWFHSAEEQDSGFYTCVLRNSTYCMKVSMSLTVAENESGLCYNSRIRYLEKSEVTKRK 1352
Query: 141 KIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+I CPD+++FK D P++ WYKECK R ++ + NA+LI V +D GNYTC
Sbjct: 1353 EISCPDMDDFKKSDQ-EPDVVWYKECKPKMW---RSIIIQKGNALLIQEVQEEDGGNYTC 1520
Query: 201 RMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN---TIEVELGSHVVMECNV--- 254
+ Y GK V RT L+V P+ ++P N I+V+LG + + C
Sbjct: 1521 EL--KYEGKL--VRRTTELKVTALLTDKPPKPLFPMENQPSVIDVQLGKPLNIPCKAFFG 1688
Query: 255 SSGVYGLLPYWQVNDEDVDSFDSTYRE 281
SG G + YW ++ ++ RE
Sbjct: 1689 FSGESGPMIYWMKGEKFIEELAGHIRE 1769
>gb|AC007248.3|AC007248 Homo sapiens BAC clone RP11-315O22 from 2, complete sequence
Length = 201535
Score = 121 bits (303), Expect = 2e-25
Identities = 57/108 (52%), Positives = 76/108 (69%)
Frame = -3
Query: 437 AVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXXXX 496
AV +V DE + RR+I+I+VPE +G+L++ SE+ +AVY+ALIQDG
Sbjct: 193880 AVANVIDENVKLCRRLIVIVVPESLGFGLLKNLSEEQIAVYSALIQDGMKVILIELEKIE 193701
Query: 497 DYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRK 544
DY MPESI+Y+KQK+GAIRW GDF+E+S T+FWK VRYHMP R+
Sbjct: 193700 DYTVMPESIQYIKQKHGAIRWHGDFTEQSQCMKTKFWKTVRYHMPPRR 193557
Score = 77.0 bits (188), Expect = 4e-12
Identities = 37/60 (61%), Positives = 45/60 (74%), Gaps = 1/60 (1%)
Frame = -1
Query: 378 LGKKVSDGKIYDAYVLYPK-NRESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLAGE 436
L SDGK+YDAYVLYPK ++ES ++ D L ILPEVLERQCGY LFIFGR++ G+
Sbjct: 195832 LSNSFSDGKLYDAYVLYPKPHKESQRHAVDALVLNILPEVLERQCGYKLFIFGRDEFPGQ 195653
Score = 61.6 bits (148), Expect = 2e-07
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Frame = -2
Query: 383 SDGKIYDAYVLYPKNRESCLYSS---DIFALKILPEVLERQCGYNLFIFGRNDLAGEA-V 438
SDGK+YDAYV+YP+N +S + + F +ILP+VLE +CGY L I+GR+ L GE
Sbjct: 79701 SDGKLYDAYVVYPRNYKSSTDGASRVEHFVHQILPDVLENKCGYTLCIYGRDMLPGEGKA 79522
Query: 439 IDV 441
ID+
Sbjct: 79521 IDI 79513
Score = 49.7 bits (117), Expect = 7e-04
Identities = 35/121 (28%), Positives = 58/121 (47%)
Frame = -3
Query: 423 YNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQ 482
+ L R LA AV+D I +SRR+II+L Y E E ++ AL++
Sbjct: 32288 FQLS*INRGYLAFSAVVDEIHSLIEKSRRLIIVL---SKSYMSNEVRYELESGLHEALVE 32118
Query: 483 DGXXXXXXXXXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPS 542
D+ +P+S+K +K + ++W D +S S ++RFWK + Y MP+
Sbjct: 32117 RKIKIILIEFTPVTDFTFLPQSLKLLKS-HRVLKWKAD---KSLSYNSRFWKNLLYLMPA 31950
Query: 543 R 543
+
Sbjct: 31949 K 31947
Score = 48.9 bits (115), Expect = 0.001
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Frame = -2
Query: 438 VIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXXXXD 497
V+ + I +SRR I IL P+ + E A E+ +A++ ALIQ+ +
Sbjct: 77238 VVTAVETNIRKSRRHIFILTPQITHNK--EFAYEQEVALHCALIQNDAKVILIEMEALSE 77065
Query: 498 Y-----ANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMP 541
+ +S++++ + G I+W D S +++FWK VRY MP
Sbjct: 77064 LDMLQAEALQDSLQHLMKVQGTIKWREDHIANKRSLNSKFWKHVRYQMP 76918
Score = 47.8 bits (112), Expect = 0.003
Identities = 26/68 (38%), Positives = 35/68 (51%)
Frame = -2
Query: 34 LVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDS 93
L E + CP P Y + WY + +N I T+ R R+ LL F+PAA+ DS
Sbjct: 89922 LENEALIVRCPRQGKP----SYTVDWYYSQTNKSIPTQERNRVFASGQLLKFLPAAVADS 89755
Query: 94 GLYECEVR 101
G+Y C VR
Sbjct: 89754 GIYTCIVR 89731
Score = 44.3 bits (103), Expect = 0.031
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = -2
Query: 384 DGKIYDAYVLYPKNRESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLAG 435
DGK YDA+V Y K FA++ILP VLE+ GY L IF R+ + G
Sbjct: 34308 DGKTYDAFVSYLKECRPENGEEHTFAVEILPRVLEKHFGYKLCIFERDVVPG 34153
Score = 38.1 bits (87), Expect = 2.2
Identities = 16/56 (28%), Positives = 31/56 (54%)
Frame = -2
Query: 174 KRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMR 229
K+L+L +N + N +D+G Y+C + GK +N+++T N+ + E +R
Sbjct: 52863 KKLLLENNKNPTIKKNAEFEDQGYYSCVHFLHHNGKLFNITKTFNITIVEGKGNLR 52696
>emb|X59769.1|MMIL1R2 Mouse Il-1r2 mRNA for type II interleukin-1 receptor, (cell line
70Z/3)
Length = 1360
Score = 120 bits (301), Expect = 3e-25
Identities = 82/266 (30%), Positives = 125/266 (46%), Gaps = 9/266 (3%)
Frame = +3
Query: 34 LVGEPTAISCPVITLPMLHSDYN------LTWYRNGSNMPITTERRARIHQRKGLLWFIP 87
L GEP + CP+ HSD + LTW + S+ I + R+ + +LW +P
Sbjct: 255 LEGEPVVLRCPLAP----HSDISSSSHSFLTWSKLDSSQLIPRDE-PRMWVKGNILWILP 419
Query: 88 AALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDL 147
A +DSG Y C R+ + +Q + LKVFKN + Y QI + G ++CPDL
Sbjct: 420 AVQQDSGTYICTFRNASHCEQMSVELKVFKNTEASL--PHVSYLQISALSTTGLLVCPDL 593
Query: 148 ENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYM 207
+ F N + +I WYK +K + A +LI N ++ D G Y C M +TY
Sbjct: 594 KEFISS-NADGKIQWYKGAILLDKGNKEFLSAGDPTRLLISNTSMDDAGYYRCVMTFTYN 770
Query: 208 GKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGV---YGLLPY 264
G++YN++R + L VK + + P I P TI LGS +++ C V G + +
Sbjct: 771 GQEYNITRNIELRVKGTTTEPIPVIISP-LETIPASLGSRLIVPCKVFLGTGTSSNTIVW 947
Query: 265 WQVNDEDVDSFDSTYREQFYEEGMPH 290
W N + + Y EG+ H
Sbjct: 948 WLANSTFI---SAAYPRGRVTEGLHH 1016
>ref|NM_010555.1| Mus musculus interleukin 1 receptor, type II (Il1r2), mRNA
Length = 1341
Score = 120 bits (301), Expect = 3e-25
Identities = 82/266 (30%), Positives = 125/266 (46%), Gaps = 9/266 (3%)
Frame = +3
Query: 34 LVGEPTAISCPVITLPMLHSDYN------LTWYRNGSNMPITTERRARIHQRKGLLWFIP 87
L GEP + CP+ HSD + LTW + S+ I + R+ + +LW +P
Sbjct: 255 LEGEPVVLRCPLAP----HSDISSSSHSFLTWSKLDSSQLIPRDE-PRMWVKGNILWILP 419
Query: 88 AALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDL 147
A +DSG Y C R+ + +Q + LKVFKN + Y QI + G ++CPDL
Sbjct: 420 AVQQDSGTYICTFRNASHCEQMSVELKVFKNTEASL--PHVSYLQISALSTTGLLVCPDL 593
Query: 148 ENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYM 207
+ F N + +I WYK +K + A +LI N ++ D G Y C M +TY
Sbjct: 594 KEFISS-NADGKIQWYKGAILLDKGNKEFLSAGDPTRLLISNTSMDDAGYYRCVMTFTYN 770
Query: 208 GKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGV---YGLLPY 264
G++YN++R + L VK + + P I P TI LGS +++ C V G + +
Sbjct: 771 GQEYNITRNIELRVKGTTTEPIPVIISP-LETIPASLGSRLIVPCKVFLGTGTSSNTIVW 947
Query: 265 WQVNDEDVDSFDSTYREQFYEEGMPH 290
W N + + Y EG+ H
Sbjct: 948 WLANSTFI---SAAYPRGRVTEGLHH 1016
>dbj|AK026803.1|AK026803 Homo sapiens cDNA: FLJ23150 fis, clone LNG09358
Length = 1897
Score = 118 bits (296), Expect = 1e-24
Identities = 55/104 (52%), Positives = 74/104 (70%)
Frame = +1
Query: 438 VIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXXXXD 497
+++V +E + +SRR+IIILV E S + L +SE+ +A+YNAL+QDG D
Sbjct: 1546 IVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQD 1725
Query: 498 YANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMP 541
Y MPESIK++KQK+GAIRW+GDF++ SA TRFWK VRYHMP
Sbjct: 1726 YEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMP 1857
Score = 75.9 bits (185), Expect = 1e-11
Identities = 36/64 (56%), Positives = 43/64 (66%), Gaps = 1/64 (1%)
Frame = +2
Query: 383 SDGKIYDAYVLYPKN-RESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLAGEAVIDV 441
SDGK YDAY+LYPK E DIF K+LPEVLE+QCGY LFI+GR+D GE + +
Sbjct: 671 SDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEGMCVM 850
Query: 442 TDEK 445
K
Sbjct: 851 EQSK 862
>ref|NM_003853.1| Homo sapiens interleukin 18 receptor accessory protein (IL18RAP),
mRNA
Length = 2681
Score = 117 bits (292), Expect = 4e-24
Identities = 130/536 (24%), Positives = 214/536 (39%), Gaps = 32/536 (5%)
Frame = +1
Query: 48 LPMLHSD--YNLTWYRNGSNM-PITTERRARIH--QRKGLLWFIPAALEDSGLYECEVRS 102
LP + S+ ++ WY+ SN P+ R++ H Q K L F+ + +SG Y C +
Sbjct: 694 LPFMGSNDLSDVQWYQQPSNGDPLEDIRKSYPHIIQDKCTLHFLTPGVNNSGSYICRPKM 873
Query: 103 LNRSKQ-----KIINLKVFKNDNGLC-FNGEMKYDQIVKSANAGKIICPDLENFKDEDNI 156
+ K+I L+V N C ++ K D ++ S G I CP L D +
Sbjct: 874 IKSPYDVACCVKMI-LEVKPQTNASCEYSASHKQDLLLGST--GSISCPSLSCQSDAQS- 1041
Query: 157 NPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRT 216
P + WYK K L+ E N I++ V +G Y C + + V
Sbjct: 1042 -PAVTWYKNGK--------LLSVERSNRIVVDEVYDYHQGTYVCDYTQSDTVSSWTVRAV 1194
Query: 217 MNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSG---VYGLLPYWQVNDEDVD 273
+ + K++P+ + P +T+EVELG + + C G V+ + W + D D++
Sbjct: 1195 VQVRTIVGDTKLKPDILDPVEDTLEVELGKPLTISCKARFGFERVFNPVIKWYIKDSDLE 1374
Query: 274 ---------SFDSTYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHFIYDSQEF 324
S ST +++ E + + +V +D KF C
Sbjct: 1375 WEVSVPEAKSIKSTLKDEIIERNII-----------LEKVTQRDLRRKFVCFVQNSIGNT 1521
Query: 325 TSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVSD 384
T ++L+ + I+IVL YR+ + + + D
Sbjct: 1522 TQSVQLKEKRGVVLLYILLGTIGTLVAVLAASALLYRHWIEIVLLYRT--YQSKDQTLGD 1695
Query: 385 GKIYDAYVLYPK-----NRESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLAGEAVI 439
K +DA+V Y K + + S + AL + P+VLE + GY+L + R+ G
Sbjct: 1696 KKDFDAFVSYAKWSSFPSEATSSLSEEHLALSLFPDVLENKYGYSLCLLERDVAPGGVYA 1875
Query: 440 DVTDEKIHQSRRVIIILVPE----PSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXXX 495
+ I +SRR I IL P PS + E AV AL
Sbjct: 1876 EDIVSIIKRSRRGIFILSPNYVNGPSIF-------ELQAAVNLALDDQTLKLILIKFCYF 2034
Query: 496 XDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRKHGSSSGF 551
+ ++P +K + + W G +S ++RFW K+RYHMP + +S GF
Sbjct: 2035 QEPESLPHLVKKALRVLPTVTWRG---LKSVPPNSRFWAKMRYHMPVK---NSQGF 2184
>gb|AF077346.1|AF077346 Homo sapiens interleukin-18 receptor accessory protein-like mRNA,
complete cds
Length = 2681
Score = 117 bits (292), Expect = 4e-24
Identities = 130/536 (24%), Positives = 214/536 (39%), Gaps = 32/536 (5%)
Frame = +1
Query: 48 LPMLHSD--YNLTWYRNGSNM-PITTERRARIH--QRKGLLWFIPAALEDSGLYECEVRS 102
LP + S+ ++ WY+ SN P+ R++ H Q K L F+ + +SG Y C +
Sbjct: 694 LPFMGSNDLSDVQWYQQPSNGDPLEDIRKSYPHIIQDKCTLHFLTPGVNNSGSYICRPKM 873
Query: 103 LNRSKQ-----KIINLKVFKNDNGLC-FNGEMKYDQIVKSANAGKIICPDLENFKDEDNI 156
+ K+I L+V N C ++ K D ++ S G I CP L D +
Sbjct: 874 IKSPYDVACCVKMI-LEVKPQTNASCEYSASHKQDLLLGST--GSISCPSLSCQSDAQS- 1041
Query: 157 NPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRT 216
P + WYK K L+ E N I++ V +G Y C + + V
Sbjct: 1042 -PAVTWYKNGK--------LLSVERSNRIVVDEVYDYHQGTYVCDYTQSDTVSSWTVRAV 1194
Query: 217 MNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSG---VYGLLPYWQVNDEDVD 273
+ + K++P+ + P +T+EVELG + + C G V+ + W + D D++
Sbjct: 1195 VQVRTIVGDTKLKPDILDPVEDTLEVELGKPLTISCKARFGFERVFNPVIKWYIKDSDLE 1374
Query: 274 ---------SFDSTYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHFIYDSQEF 324
S ST +++ E + + +V +D KF C
Sbjct: 1375 WEVSVPEAKSIKSTLKDEIIERNII-----------LEKVTQRDLRRKFVCFVQNSIGNT 1521
Query: 325 TSYIKLEHPVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVSD 384
T ++L+ + I+IVL YR+ + + + D
Sbjct: 1522 TQSVQLKEKRGVVLLYILLGTIGTLVAVLAASALLYRHWIEIVLLYRT--YQSKDQTLGD 1695
Query: 385 GKIYDAYVLYPK-----NRESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLAGEAVI 439
K +DA+V Y K + + S + AL + P+VLE + GY+L + R+ G
Sbjct: 1696 KKDFDAFVSYAKWSSFPSEATSSLSEEHLALSLFPDVLENKYGYSLCLLERDVAPGGVYA 1875
Query: 440 DVTDEKIHQSRRVIIILVPE----PSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXXX 495
+ I +SRR I IL P PS + E AV AL
Sbjct: 1876 EDIVSIIKRSRRGIFILSPNYVNGPSIF-------ELQAAVNLALDDQTLKLILIKFCYF 2034
Query: 496 XDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRKHGSSSGF 551
+ ++P +K + + W G +S ++RFW K+RYHMP + +S GF
Sbjct: 2035 QEPESLPHLVKKALRVLPTVTWRG---LKSVPPNSRFWAKMRYHMPVK---NSQGF 2184
>ref|NM_053953.1| Rattus norvegicus interleukin 1 receptor, type II (Il1r2), mRNA
Length = 1380
Score = 117 bits (292), Expect = 4e-24
Identities = 78/244 (31%), Positives = 119/244 (47%), Gaps = 9/244 (3%)
Frame = +1
Query: 34 LVGEPTAISCPVITLPMLHSDYN------LTWYRNGSNMPITTERRARIHQRKGLLWFIP 87
L GEP + CP++ HSD + LTW ++ S+ I + R+ + LW +P
Sbjct: 286 LEGEPVVLRCPLVP----HSDTSSSSRSLLTWSKSDSSQLIPGDE-PRMWVKDDTLWVLP 450
Query: 88 AALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDL 147
A +DSG Y C R+ + +Q + LKVFKN + Y QI ++ G ++CPDL
Sbjct: 451 AVQQDSGTYICTFRNASHCEQMSLELKVFKNTEASF--PLVSYLQISALSSTGLLVCPDL 624
Query: 148 ENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYM 207
+ F + +I WYK +K+ + A +LI N ++ D G Y C M +TY
Sbjct: 625 KEFISS-RTDGKIQWYKGSILLDKGNKKFLSAGDPTRLLISNTSMGDAGYYRCVMTFTYE 801
Query: 208 GKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGV---YGLLPY 264
GK+YN++R + L VK + P I P TI LGS +++ C V G + +
Sbjct: 802 GKEYNITRNIELRVKGITTEPIPVIISP-LETIPASLGSRLIVPCKVFLGTGTSSNTIVW 978
Query: 265 WQVN 268
W N
Sbjct: 979 WMAN 990
>emb|Z22812.1|RNINL1R2A R.norvegicus interleukin-1 receptor type 2
Length = 1380
Score = 117 bits (292), Expect = 4e-24
Identities = 78/244 (31%), Positives = 119/244 (47%), Gaps = 9/244 (3%)
Frame = +1
Query: 34 LVGEPTAISCPVITLPMLHSDYN------LTWYRNGSNMPITTERRARIHQRKGLLWFIP 87
L GEP + CP++ HSD + LTW ++ S+ I + R+ + LW +P
Sbjct: 286 LEGEPVVLRCPLVP----HSDTSSSSRSLLTWSKSDSSQLIPGDE-PRMWVKDDTLWVLP 450
Query: 88 AALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDL 147
A +DSG Y C R+ + +Q + LKVFKN + Y QI ++ G ++CPDL
Sbjct: 451 AVQQDSGTYICTFRNASHCEQMSLELKVFKNTEASF--PLVSYLQISALSSTGLLVCPDL 624
Query: 148 ENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYM 207
+ F + +I WYK +K+ + A +LI N ++ D G Y C M +TY
Sbjct: 625 KEFISS-RTDGKIQWYKGSILLDKGNKKFLSAGDPTRLLISNTSMGDAGYYRCVMTFTYE 801
Query: 208 GKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGV---YGLLPY 264
GK+YN++R + L VK + P I P TI LGS +++ C V G + +
Sbjct: 802 GKEYNITRNIELRVKGITTEPIPVIISP-LETIPASLGSRLIVPCKVFLGTGTSSNTIVW 978
Query: 265 WQVN 268
W N
Sbjct: 979 WMAN 990
>dbj|AB033415.1|AB033415 Equus caballus IL-1RII mRNA for interleukin-1 receptor type II,
complete cds
Length = 1347
Score = 113 bits (282), Expect = 5e-23
Identities = 68/244 (27%), Positives = 120/244 (48%), Gaps = 7/244 (2%)
Frame = +2
Query: 37 EPTAISCPVIT---LPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDS 93
EP + CP L S N+TW +N S + E R+ + LW +PA DS
Sbjct: 257 EPVVLRCPQAWYRWLDSASSHVNVTWRKNDSTRMVPEEEETRMWVQDNALWILPALQGDS 436
Query: 94 GLYECEVRSLNRSKQKIINLKVF-KNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKD 152
G Y C VR+ + + L+VF K + L + + Y QI+ + +G ++CP+L F
Sbjct: 437 GTYICTVRNASYCYEMSTELRVFEKTEAALTY---ISYPQILTLSTSGLLVCPELSEFT- 604
Query: 153 EDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYN 212
+ + E+ WYK+ ++++ + G +L+ NV+++D G Y+C M + G + N
Sbjct: 605 RNKTDVEVQWYKDSVLLDQDNEKFLSVAGPPRLLVQNVSMEDAGYYSCVMTLIHNGTRVN 784
Query: 213 VSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGV---YGLLPYWQVND 269
++R + L V++ + P + P TI LGS +++ C V G + +W N+
Sbjct: 785 ITRNIELRVQKRREETVPVIVSP-RQTILASLGSRLIIPCKVFLGAGTQWTTDLWWMANN 961
Query: 270 EDVD 273
++D
Sbjct: 962 TNID 973
>ref|NM_010743.1| Mus musculus interleukin 1 receptor-like 1 (Il1rl1), mRNA
Length = 2667
Score = 112 bits (281), Expect = 7e-23
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 6/288 (2%)
Frame = +2
Query: 34 LVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDS 93
L E + CP S Y + WY + +N I T++R RI + L F+PA +EDS
Sbjct: 314 LENEALIVRCP----QRGRSTYPVEWYYSDTNESIPTQKRNRIFVSRDRLKFLPARVEDS 481
Query: 94 GLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDE 153
G+Y C +RS N +K +N+ + K + Y + S KI CP ++ +
Sbjct: 482 GIYACVIRSPNLNKTGYLNVTIHKKPPSCNIPDYLMYSTVRGSDKNFKITCPTIDLY--- 652
Query: 154 DNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNV 213
N + W+K CK+ L++ R + + I NVT D+G+YTC+ + G Y V
Sbjct: 653 -NWTAPVQWFKNCKA--LQEPR--FRAHRSYLFIDNVTHDDEGDYTCQFTHVENGTNYIV 817
Query: 214 SRTMNLEVKESPLKMRPEFIY-PNNNTIEVELGSHVVMECNV--SSGVYGLLP-YWQVND 269
+ T + V+E M P P N+T+EVE+G + C+ G + L WQ+N
Sbjct: 818 TATRSFTVEEKGFSMFPVITNPPYNHTMEVEIGKPASIACSACFGKGSHFLADVLWQINK 997
Query: 270 EDVDSFDST--YREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFC 315
V +F E+ E + + + I+ V KD + ++ C
Sbjct: 998 TVVGNFGEARIQEEEGRNESSSNDMDCLTSVLRITGVTEKDLSLEYDC 1141
>emb|Y07519.1|MMST2 Mouse ST2 gene
Length = 2646
Score = 112 bits (281), Expect = 7e-23
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 6/288 (2%)
Frame = +3
Query: 34 LVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDS 93
L E + CP S Y + WY + +N I T++R RI + L F+PA +EDS
Sbjct: 291 LENEALIVRCP----QRGRSTYPVEWYYSDTNESIPTQKRNRIFVSRDRLKFLPARVEDS 458
Query: 94 GLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDE 153
G+Y C +RS N +K +N+ + K + Y + S KI CP ++ +
Sbjct: 459 GIYACVIRSPNLNKTGYLNVTIHKKPPSCNIPDYLMYSTVRGSDKNFKITCPTIDLY--- 629
Query: 154 DNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNV 213
N + W+K CK+ L++ R + + I NVT D+G+YTC+ + G Y V
Sbjct: 630 -NWTAPVQWFKNCKA--LQEPR--FRAHRSYLFIDNVTHDDEGDYTCQFTHAENGTNYIV 794
Query: 214 SRTMNLEVKESPLKMRPEFIY-PNNNTIEVELGSHVVMECNV--SSGVYGLLP-YWQVND 269
+ T + V+E M P P N+T+EVE+G + C+ G + L WQ+N
Sbjct: 795 TATRSFTVEEKGFSMFPVITNPPYNHTMEVEIGKPASIACSACFGKGSHFLADVLWQINK 974
Query: 270 EDVDSFDST--YREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFC 315
V +F E+ E + + + I+ V KD + ++ C
Sbjct: 975 TVVGNFGEARIQEEEGRNESSSNDMDCLTSVLRITGVTEKDLSLEYDC 1118
>gb|M24843.1|MUST1A Mouse T1 protein mRNA, complete cds
Length = 2653
Score = 112 bits (281), Expect = 7e-23
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 6/288 (2%)
Frame = +3
Query: 34 LVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDS 93
L E + CP S Y + WY + +N I T++R RI + L F+PA +EDS
Sbjct: 288 LENEALIVRCP----QRGRSTYPVEWYYSDTNESIPTQKRNRIFVSRDRLKFLPARVEDS 455
Query: 94 GLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDE 153
G+Y C +RS N +K +N+ + K + Y + S KI CP ++ +
Sbjct: 456 GIYACVIRSPNLNKTGYLNVTIHKKPPSCNIPDYLMYSTVRGSDKNFKITCPTIDLY--- 626
Query: 154 DNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNV 213
N + W+K CK+ L++ R + + I NVT D+G+YTC+ + G Y V
Sbjct: 627 -NWTAPVQWFKNCKA--LQEPR--FRAHRSYLFIDNVTHDDEGDYTCQFTHVENGTNYIV 791
Query: 214 SRTMNLEVKESPLKMRPEFIY-PNNNTIEVELGSHVVMECNV--SSGVYGLLP-YWQVND 269
+ T + V+E M P P N+T+EVE+G + C+ G + L WQ+N
Sbjct: 792 TATRSFTVEEKGFSMFPVITNPPYNHTMEVEIGKPASIACSACFGKGSHFLADVLWQINK 971
Query: 270 EDVDSFDST--YREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFC 315
V +F E+ E + + + I+ V KD + ++ C
Sbjct: 972 TVVGNFGEARIQEEEGRNESSSNDMDCLTSVLRITGVTEKDLSLEYDC 1115
>ref|NM_013037.1| Rattus norvegicus Interleukin 1 receptor-like 1 (Fos-responsive
gene 1) (St2), mRNA
Length = 2586
Score = 110 bits (275), Expect = 4e-22
Identities = 75/262 (28%), Positives = 121/262 (45%), Gaps = 5/262 (1%)
Frame = +1
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
WY + +N I T++R RI + L F+PA +EDSG+Y C +RS K +N+ ++K
Sbjct: 361 WYYSNTNERIPTQKRNRIFVSRDRLKFLPAKVEDSGIYTCVIRSPESIKTGSLNVTIYKR 540
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
M Y + S KI CP + + N + W+K CK+ L+ R
Sbjct: 541 PPNCKIPDYMMYSTVDGSDKNSKITCPTIALY----NWTAPVQWFKNCKA--LQGPR--F 696
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIY-PNN 237
+ + I V+ D+G+YTCR +T G Y V+ T + V+E P P+N
Sbjct: 697 RAHMSYLFIDKVSHVDEGDYTCRFTHTENGTNYIVTATRSFTVEEKGFSTFPVITNPPHN 876
Query: 238 NTIEVELGSHVVMECNVSSGVYG--LLPYWQVNDEDVDSFDST--YREQFYEEGMPHGIA 293
T+EVE+G + C+ G + WQ+N + SF E+ + +G+
Sbjct: 877 YTVEVEIGKTANIACSACFGTASQFVAVLWQINKTRIGSFGKARIQEEKGPNKSSSNGMI 1056
Query: 294 VSGTKFNISEVKLKDYAYKFFC 315
+ I+ V KD++ K+ C
Sbjct: 1057CLTSLLRITGVTDKDFSLKYDC 1122
>gb|U04319.1|RNU04319 Rattus norvegicus Fit-1S (Fit-1) mRNA, complete cds
Length = 2586
Score = 110 bits (275), Expect = 4e-22
Identities = 75/262 (28%), Positives = 121/262 (45%), Gaps = 5/262 (1%)
Frame = +1
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
WY + +N I T++R RI + L F+PA +EDSG+Y C +RS K +N+ ++K
Sbjct: 361 WYYSNTNERIPTQKRNRIFVSRDRLKFLPAKVEDSGIYTCVIRSPESIKTGSLNVTIYKR 540
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
M Y + S KI CP + + N + W+K CK+ L+ R
Sbjct: 541 PPNCKIPDYMMYSTVDGSDKNSKITCPTIALY----NWTAPVQWFKNCKA--LQGPR--F 696
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIY-PNN 237
+ + I V+ D+G+YTCR +T G Y V+ T + V+E P P+N
Sbjct: 697 RAHMSYLFIDKVSHVDEGDYTCRFTHTENGTNYIVTATRSFTVEEKGFSTFPVITNPPHN 876
Query: 238 NTIEVELGSHVVMECNVSSGVYG--LLPYWQVNDEDVDSFDST--YREQFYEEGMPHGIA 293
T+EVE+G + C+ G + WQ+N + SF E+ + +G+
Sbjct: 877 YTVEVEIGKTANIACSACFGTASQFVAVLWQINKTRIGSFGKARIQEEKGPNKSSSNGMI 1056
Query: 294 VSGTKFNISEVKLKDYAYKFFC 315
+ I+ V KD++ K+ C
Sbjct: 1057CLTSLLRITGVTDKDFSLKYDC 1122
>dbj|AB041737.2|AB041737 Gallus gallus mRNA for ST2, complete cds
Length = 1352
Score = 110 bits (274), Expect = 5e-22
Identities = 85/296 (28%), Positives = 137/296 (45%), Gaps = 10/296 (3%)
Frame = +2
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERR-ARIHQRKGLLWFIPA 88
+Y + GE + CP L +TW+ G+ I E +R+ + LWF+P
Sbjct: 161 SYDTMEGEALVVRCPHSVLSA-----KVTWHHTGTRKRIPEEEEGSRVFSKGIFLWFLPT 325
Query: 89 ALEDSGLYECEVRSLNRSK-QKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDL 147
+LEDSG Y C + + SK ++ +N++V G CF + Y GKI CP
Sbjct: 326 SLEDSGNYTCVINYPDGSKKERKMNVQVHPYKQGTCFPSRILY---ANETRKGKISCPTF 496
Query: 148 ENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYM 207
N+++ I WYK+C+ ++ +R + + I I N+ +D G YTC+ YT+
Sbjct: 497 RNYENATIIQ----WYKDCRP--IQGERYFMHDPY--IFIENLNKEDDGYYTCQFTYTHR 652
Query: 208 GKQYNVSRTMNL--EVKESPLKMRPEFIYP-NNNTIEVELGSHVVMECNVSSGVYG---L 261
G+ +NVS T E K S L + + ++P + + +EVELG+ ++C G+
Sbjct: 653 GRVFNVSATRIFVSEAKHSSLPV--QILFPKDEDVLEVELGAAFSLKCQARLGIKKQPIA 826
Query: 262 LPYWQVNDEDVDSFD-STYREQF-YEEGMPHGIAVSGTKFNISEVKLKDYAYKFFC 315
+ W VN + D R++F Y EG H IS ++ D F C
Sbjct: 827 VVTWDVNKMPAEYADEEKIRQEFSYFEGQ-HQEYYGEATLTISNIEHTDLQSSFSC 991
>ref|NM_003856.1| Homo sapiens interleukin 1 receptor-like 1 (IL1RL1), mRNA
Length = 1357
Score = 109 bits (273), Expect = 6e-22
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 7/289 (2%)
Frame = +2
Query: 34 LVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDS 93
L E + CP P Y + WY + +N I T+ R R+ LL F+PA + DS
Sbjct: 125 LENEALIVRCPRQGKP----SYTVDWYYSQTNKSIPTQERNRVFASGQLLKFLPAEVADS 292
Query: 94 GLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDE 153
G+Y C VRS ++ N+ ++K + + Y + S KI CP ++ +
Sbjct: 293 GIYTCIVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYSTVSGSEKNSKIYCPTIDLY--- 463
Query: 154 DNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNV 213
N + W+K C++ L+ R ++ ++I NV +D G+YTC+ ++ G Y+V
Sbjct: 464 -NWTAPLEWFKNCQA--LQGSR--YRAHKSFLVIDNVMTEDAGDYTCKFIHNENGANYSV 628
Query: 214 SRTMNLEVK-ESPLKMRPEFIYPNNNTI-EVELGSHVVMECNVSSG---VYGLLPYWQVN 268
+ T + VK E + P P N I EVE+G + + C+ G + WQ+N
Sbjct: 629 TATRSFTVKDEQGFSLFPVIGAPAQNEIKEVEIGKNANLTCSACFGKGTQFLAAVLWQLN 808
Query: 269 DEDVDSFDS--TYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFC 315
+ F +E+ + +G+A I++VK +D ++ C
Sbjct: 809 GTKITDFGEPRIQQEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQYDC 955
>dbj|D12763.1|HUMST2M Homo sapiens mRNA for ST2 protein
Length = 1357
Score = 109 bits (273), Expect = 6e-22
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 7/289 (2%)
Frame = +2
Query: 34 LVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDS 93
L E + CP P Y + WY + +N I T+ R R+ LL F+PA + DS
Sbjct: 125 LENEALIVRCPRQGKP----SYTVDWYYSQTNKSIPTQERNRVFASGQLLKFLPAEVADS 292
Query: 94 GLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDE 153
G+Y C VRS ++ N+ ++K + + Y + S KI CP ++ +
Sbjct: 293 GIYTCIVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYSTVSGSEKNSKIYCPTIDLY--- 463
Query: 154 DNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNV 213
N + W+K C++ L+ R ++ ++I NV +D G+YTC+ ++ G Y+V
Sbjct: 464 -NWTAPLEWFKNCQA--LQGSR--YRAHKSFLVIDNVMTEDAGDYTCKFIHNENGANYSV 628
Query: 214 SRTMNLEVK-ESPLKMRPEFIYPNNNTI-EVELGSHVVMECNVSSG---VYGLLPYWQVN 268
+ T + VK E + P P N I EVE+G + + C+ G + WQ+N
Sbjct: 629 TATRSFTVKDEQGFSLFPVIGAPAQNEIKEVEIGKNANLTCSACFGKGTQFLAAVLWQLN 808
Query: 269 DEDVDSFDS--TYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFC 315
+ F +E+ + +G+A I++VK +D ++ C
Sbjct: 809 GTKITDFGEPRIQQEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQYDC 955
>ref|NM_010553.1| Mus musculus interleukin 18 receptor accessory protein (Il18rap),
mRNA
Length = 2499
Score = 107 bits (267), Expect = 3e-21
Identities = 124/503 (24%), Positives = 200/503 (39%), Gaps = 17/503 (3%)
Frame = +2
Query: 56 NLTWY---RNGSNMPITTERRARIH-QRKGLLWFIPAALEDSGLYECEVRSLNRSKQKII 111
++ WY R+GS P+ R H Q +G+L + Y C R RS Q +
Sbjct: 680 DVQWYMQPRSGS--PLEEISRNSPHMQSEGMLHILAPQTNSIWSYICRPRI--RSPQDMA 847
Query: 112 N-----LKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKEC 166
L+V N C N +Q++ + G I CP L D + PE+ WYK
Sbjct: 848 CCIKTVLEVKPQRNVSCGNTAQD-EQVLLLGSTGSIHCPSLSCQSDVQS--PEMTWYK-- 1012
Query: 167 KSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPL 226
D RL+ +N I + ++ + ++G Y C + + V + + +
Sbjct: 1013 ------DGRLLPEHKKNPIEMADIYVFNQGLYVCDYTQSDNVSSWTVRAVVKVRTIGKDI 1174
Query: 227 KMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGL---LPYWQVNDEDVDSFDSTYREQF 283
++PE + P +T++VELG + + C V G L + W V + + S + E+
Sbjct: 1175 NVKPEILDPITDTLDVELGKPLTLPCRVQFGFQRLSKPVIKWYVKESTQEWEMSVFEEKR 1354
Query: 284 YEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXX 343
+ + + + T F + EV +D + KF C T I+L +
Sbjct: 1355 IQSTFKNEV-IERTIF-LREVTQRDLSRKFVCFAQNSIGNTTRTIRLRKKEEVVFVYILL 1528
Query: 344 XXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLY-----PKNR 398
+ I++VL R+ + + + D K +DA+V Y P+
Sbjct: 1529 GTALMLVGVLVAAAFLYWYWIEVVLLCRT--YKNKDETLGDKKEFDAFVSYSNWSSPETD 1702
Query: 399 ESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVP 458
S + AL + PEVLE GY L + R+ G D I +SRR I IL P
Sbjct: 1703 AVGSLSEEHLALNLFPEVLEDTYGYRLCLLDRDVTPGGVYADDIVSIIKKSRRGIFILSP 1882
Query: 459 EPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXXXXDYANMPESIKYVKQKYGAIRWT 518
Y E AV AL+ + ++P +K + + W
Sbjct: 1883 S---YLNGPRVFELQAAVNLALVDQTLKLILIKFCSFQEPESLPYLVKKALRVLPTVTWK 2053
Query: 519 GDFSERSHSASTRFWKKVRYHMP 541
G +S AS+RFW ++RYHMP
Sbjct: 2054 G---LKSVHASSRFWTQIRYHMP 2113
>gb|AF077347.1|AF077347 Mus musculus interleukin-18 receptor accessory protein-like mRNA,
complete cds
Length = 2499
Score = 107 bits (267), Expect = 3e-21
Identities = 124/503 (24%), Positives = 200/503 (39%), Gaps = 17/503 (3%)
Frame = +2
Query: 56 NLTWY---RNGSNMPITTERRARIH-QRKGLLWFIPAALEDSGLYECEVRSLNRSKQKII 111
++ WY R+GS P+ R H Q +G+L + Y C R RS Q +
Sbjct: 680 DVQWYMQPRSGS--PLEEISRNSPHMQSEGMLHILAPQTNSIWSYICRPRI--RSPQDMA 847
Query: 112 N-----LKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKEC 166
L+V N C N +Q++ + G I CP L D + PE+ WYK
Sbjct: 848 CCIKTVLEVKPQRNVSCGNTAQD-EQVLLLGSTGSIHCPSLSCQSDVQS--PEMTWYK-- 1012
Query: 167 KSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPL 226
D RL+ +N I + ++ + ++G Y C + + V + + +
Sbjct: 1013 ------DGRLLPEHKKNPIEMADIYVFNQGLYVCDYTQSDNVSSWTVRAVVKVRTIGKDI 1174
Query: 227 KMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGL---LPYWQVNDEDVDSFDSTYREQF 283
++PE + P +T++VELG + + C V G L + W V + + S + E+
Sbjct: 1175 NVKPEILDPITDTLDVELGKPLTLPCRVQFGFQRLSKPVIKWYVKESTQEWEMSVFEEKR 1354
Query: 284 YEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHFIYDSQEFTSYIKLEHPVQNXXXXXXX 343
+ + + + T F + EV +D + KF C T I+L +
Sbjct: 1355 IQSTFKNEV-IERTIF-LREVTQRDLSRKFVCFAQNSIGNTTRTIRLRKKEEVVFVYILL 1528
Query: 344 XXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLY-----PKNR 398
+ I++VL R+ + + + D K +DA+V Y P+
Sbjct: 1529 GTALMLVGVLVAAAFLYWYWIEVVLLCRT--YKNKDETLGDKKEFDAFVSYSNWSSPETD 1702
Query: 399 ESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVP 458
S + AL + PEVLE GY L + R+ G D I +SRR I IL P
Sbjct: 1703 AVGSLSEEHLALNLFPEVLEDTYGYRLCLLDRDVTPGGVYADDIVSIIKKSRRGIFILSP 1882
Query: 459 EPSCYGILEDASEKHLAVYNALIQDGXXXXXXXXXXXXDYANMPESIKYVKQKYGAIRWT 518
Y E AV AL+ + ++P +K + + W
Sbjct: 1883 S---YLNGPRVFELQAAVNLALVDQTLKLILIKFCSFQEPESLPYLVKKALRVLPTVTWK 2053
Query: 519 GDFSERSHSASTRFWKKVRYHMP 541
G +S AS+RFW ++RYHMP
Sbjct: 2054 G---LKSVHASSRFWTQIRYHMP 2113
>gb|BC021159.1|BC021159 Mus musculus, Similar to interleukin 1 receptor accessory protein,
clone MGC:14036 IMAGE:4161899, mRNA, complete cds
Length = 1916
Score = 95.5 bits (236), Expect = 1e-17
Identities = 69/238 (28%), Positives = 112/238 (46%), Gaps = 16/238 (6%)
Frame = +1
Query: 33 VLVGEPTAISCPVITLPMLH-------SDYNLTWY--RNGSNMPITTERRA---RIHQRK 80
V EP I CP+ + + S L WY R ++ R RI + K
Sbjct: 241 VFEDEPARIKCPLFEHFLKYNYSTAHSSGLTLIWYWTRQDRDLEEPINFRLPENRISKEK 420
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKY--DQIVKSAN 138
+LWF P L D+G Y C +R+ + L+V + D+ CFN M++ ++
Sbjct: 421 DVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDS--CFNSAMRFPVHKMYIEHG 594
Query: 139 AGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNY 198
KI CP+++ + ++ P + WYK C + D VL EG N + + + + GNY
Sbjct: 595 IHKITCPNVDGY-FPSSVKPSVTWYKGCTE--IVDFHNVLPEGMNLSFFIPL-VSNNGNY 762
Query: 199 TCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTI--EVELGSHVVMECNV 254
TC + Y G+ ++++RT+ ++V SP P IY N+ + E E G +V+ C V
Sbjct: 763 TCVVTYPENGRLFHLTRTVTVKVVGSPKDALPPQIYSPNDRVVYEKEPGEELVIPCKV 936
>dbj|AB029084.1|AB029084 Homo sapiens ST2V mRNA, complete cds
Length = 1680
Score = 94.0 bits (232), Expect = 3e-17
Identities = 59/211 (27%), Positives = 102/211 (47%), Gaps = 3/211 (1%)
Frame = +2
Query: 34 LVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDS 93
L E + CP P Y + WY + +N I T+ R R+ LL F+PA + DS
Sbjct: 278 LENEALIVRCPRQGKP----SYTVDWYYSQTNKSIPTQERNRVFASGRLLKFLPAEVADS 445
Query: 94 GLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDE 153
G+Y C VRS ++ N+ ++K + + Y + S KI CP ++ +
Sbjct: 446 GIYTCIVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYSTVSGSEKNSKIYCPTIDLY--- 616
Query: 154 DNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNV 213
N + W+K C++ L+ R ++ ++I NV +D G+YTC+ ++ G Y+V
Sbjct: 617 -NWTAPLEWFKNCQA--LQGSR--YRAHKSFLVIDNVMTEDAGDYTCKFIHNENGANYSV 781
Query: 214 SRTMNLEVK---ESPLKMRPEFIYPNNNTIE 241
+ T + VK +S K++ I+ N + I+
Sbjct: 782 TATRSFTVKVWCQSFCKLKKSLIFSNTHWIQ 874
>ref|XM_036436.4| Homo sapiens interleukin 1 receptor accessory protein (IL1RAP),
mRNA
Length = 2041
Score = 90.1 bits (222), Expect = 5e-16
Identities = 69/238 (28%), Positives = 112/238 (46%), Gaps = 16/238 (6%)
Frame = +3
Query: 33 VLVGEPTAISCPVI------TLPMLHS-DYNLTWY--RNGSNMPITTERRA---RIHQRK 80
V EP I CP+ HS L WY R ++ R RI + K
Sbjct: 315 VFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEK 494
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMK--YDQIVKSAN 138
+LWF P L D+G Y C +R+ + L+V + D+ CFN MK ++
Sbjct: 495 DVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDS--CFNSPMKLPVHKLYIEYG 668
Query: 139 AGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNY 198
+I CP+++ + ++ P I WY C +++ V+ EG N + L I + GNY
Sbjct: 669 IQRITCPNVDGY-FPSSVKPTITWYMGCYK--IQNFNNVIPEGMN-LSFLIALISNNGNY 836
Query: 199 TCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIY-PNNNTI-EVELGSHVVMECNV 254
TC + Y G+ ++++RT+ ++V SP P I+ PN++ + E E G +++ C V
Sbjct: 837 TCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTV 1010
>gb|BC012580.1|BC012580 Homo sapiens, Similar to interleukin 1 receptor-like 1, clone
IMAGE:4043930, mRNA
Length = 918
Score = 90.1 bits (222), Expect = 5e-16
Identities = 54/190 (28%), Positives = 92/190 (48%)
Frame = +3
Query: 34 LVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDS 93
L E + CP P Y + WY + +N I T+ R R+ LL F+PA + DS
Sbjct: 312 LENEALIVRCPRQGKP----SYTVDWYYSQTNKSIPTQERNRVFASGQLLKFLPAEVADS 479
Query: 94 GLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDE 153
G+Y C VRS ++ N+ ++K + + Y + S KI CP ++ +
Sbjct: 480 GIYTCIVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYSTVSGSEKNSKIYCPTIDLY--- 650
Query: 154 DNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNV 213
N + W+K C++ L+ R ++ ++I NV +D G+YTC+ ++ G Y+V
Sbjct: 651 -NWTAPLEWFKNCQA--LQGSR--YRAHKSFLVIDNVMTEDAGDYTCKFIHNENGANYSV 815
Query: 214 SRTMNLEVKE 223
+ T + VK+
Sbjct: 816 TATRSFTVKD 845
>gb|BC016141.1|BC016141 Homo sapiens, interleukin 1 receptor accessory protein, clone
IMAGE:3920152, mRNA
Length = 1549
Score = 90.1 bits (222), Expect = 5e-16
Identities = 69/238 (28%), Positives = 112/238 (46%), Gaps = 16/238 (6%)
Frame = +2
Query: 33 VLVGEPTAISCPVI------TLPMLHS-DYNLTWY--RNGSNMPITTERRA---RIHQRK 80
V EP I CP+ HS L WY R ++ R RI + K
Sbjct: 314 VFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEK 493
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMK--YDQIVKSAN 138
+LWF P L D+G Y C +R+ + L+V + D+ CFN MK ++
Sbjct: 494 DVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDS--CFNSPMKLPVHKLYIEYG 667
Query: 139 AGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNY 198
+I CP+++ + ++ P I WY C +++ V+ EG N + L I + GNY
Sbjct: 668 IQRITCPNVDGY-FPSSVKPTITWYMGCYK--IQNFNNVIPEGMN-LSFLIALISNNGNY 835
Query: 199 TCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIY-PNNNTI-EVELGSHVVMECNV 254
TC + Y G+ ++++RT+ ++V SP P I+ PN++ + E E G +++ C V
Sbjct: 836 TCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTV 1009
>gb|AF167343.1|AF167343 Homo sapiens soluble interleukin-1 receptor accessory protein
(IL1RAP) mRNA, complete cds
Length = 1857
Score = 90.1 bits (222), Expect = 5e-16
Identities = 69/238 (28%), Positives = 112/238 (46%), Gaps = 16/238 (6%)
Frame = +1
Query: 33 VLVGEPTAISCPVI------TLPMLHS-DYNLTWY--RNGSNMPITTERRA---RIHQRK 80
V EP I CP+ HS L WY R ++ R RI + K
Sbjct: 109 VFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEK 288
Query: 81 GLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMK--YDQIVKSAN 138
+LWF P L D+G Y C +R+ + L+V + D+ CFN MK ++
Sbjct: 289 DVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDS--CFNSPMKLPVHKLYIEYG 462
Query: 139 AGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNY 198
+I CP+++ + ++ P I WY C +++ V+ EG N + L I + GNY
Sbjct: 463 IQRITCPNVDGY-FPSSVKPTITWYMGCYK--IQNFNNVIPEGMN-LSFLIALISNNGNY 630
Query: 199 TCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIY-PNNNTI-EVELGSHVVMECNV 254
TC + Y G+ ++++RT+ ++V SP P I+ PN++ + E E G +++ C V
Sbjct: 631 TCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTV 804
>gb|AF380138.1|AF380138 Monkeypox virus strain Zaire-96-I-16, complete genome
Length = 196858
Score = 84.3 bits (207), Expect = 3e-14
Identities = 86/313 (27%), Positives = 139/313 (43%), Gaps = 18/313 (5%)
Frame = +2
Query: 21 FSAEECV-----ICNYFVLVGEPTAISCPVITLPMLHSDYNLT---WYRNGSNMPITTER 72
F+ EC+ ++ L EP + CP I L S YN+ W + G++ +R
Sbjct: 172463 FNVPECIDKGQYFASFMELENEPVILPCPQINT--LSSGYNILDILWEKRGAD----NDR 172624
Query: 73 RARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFK-NDNGLCFNGEMKYD 131
+I +L P DSG+Y C + +NL + +++ + + Y
Sbjct: 172625 IIQIDNGSNMLILNPTQ-SDSGIYICITTNETYCDMMSLNLTIVSVSESNIDL---ISYP 172792
Query: 132 QIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVT 191
QIV + G+++CP++ F N+N +I W + L +KRL I I +V
Sbjct: 172793 QIVNERSTGEMVCPNINAFISS-NVNADIIWSGHRR---LRNKRLK-QRTPGIITIEDVR 172957
Query: 192 IQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVME 251
D G YTC + Y YMGK YNV+R + LEV++ + P P + +GS++ +
Sbjct: 172958 KNDAGYYTCVLEYIYMGKTYNVTRIIKLEVRDRIIP--PTMKLPEG--VVTSIGSNLTIT 173125
Query: 252 CNVS-------SGVYGLL--PYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNIS 302
C VS + V+ + Y++ DED D S + + M V + NI+
Sbjct: 173126 CRVSLRLPTTDADVFWISNGMYYEEEDEDGDGRISVANKIY----MTDKRRVITSWLNIN 173293
Query: 303 EVKLKDYAYKFFC 315
VK +D A F C
Sbjct: 173294 PVKEED-ATTFTC 173329
>gb|M35027.1|VACCG Vaccinia virus, complete genome
Length = 191737
Score = 84.3 bits (207), Expect = 3e-14
Identities = 86/313 (27%), Positives = 140/313 (44%), Gaps = 18/313 (5%)
Frame = +2
Query: 21 FSAEECV-----ICNYFVLVGEPTAISCPVITLPMLHSDYNLT---WYRNGSNMPITTER 72
F+A EC+ ++ L EP + CP I L S YN+ W + G++ +R
Sbjct: 174224 FNASECIDKG*YFASFMELENEPVILPCPQINT--LSSGYNILDILWEKRGAD----NDR 174385
Query: 73 RARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFK-NDNGLCFNGEMKYD 131
I +L P DSG+Y C + +NL + +++ + F + Y
Sbjct: 174386 IIPIDNGSNMLILNPTQ-SDSGIYICITTNETYCDMMSLNLTIVSVSESNIDF---ISYP 174553
Query: 132 QIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVT 191
QIV + G+++CP++ F N+N +I W + L +KRL I I +V
Sbjct: 174554 QIVNERSTGEMVCPNINAFI-ASNVNADIIWSGHRR---LRNKRLK-QRTPGIITIEDVR 174718
Query: 192 IQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVME 251
D G YTC + Y Y GK YNV+R + LEV++ + P P + +GS++ +
Sbjct: 174719 KNDAGYYTCVLEYIYGGKTYNVTRIVKLEVRDKII--HPTMQLPEG--VVTSIGSNLTIA 174886
Query: 252 CNVS-------SGVYGLL--PYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNIS 302
C VS + V+ + Y++ +D D D S + + M V ++ NI+
Sbjct: 174887 CRVSLRPPTTDADVFWISNGMYYEEDDGDGDGRISVANKIY----MTDKRRVITSRLNIN 175054
Query: 303 EVKLKDYAYKFFC 315
VK +D A F C
Sbjct: 175055 PVKEED-ATTFTC 175090
>emb|Y15035.1|CVY15035 Cowpox virus strain GRI-90 DNA (49 kb fragment)
Length = 49649
Score = 81.3 bits (199), Expect = 2e-13
Identities = 69/244 (28%), Positives = 111/244 (45%), Gaps = 9/244 (3%)
Frame = +2
Query: 21 FSAEECV-----ICNYFVLVGEPTAISCPVITLPMLHSDYNLT---WYRNGSNMPITTER 72
F+A EC+ ++ L EP + CP I L S YN+ W + G++ +R
Sbjct: 19490 FNAPECIDKGQYFASFMELENEPVILPCPQINT--LSSGYNILDILWEKRGAD----NDR 19651
Query: 73 RARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFK-NDNGLCFNGEMKYD 131
I +L P DSG+Y C + +NL + +++ + + Y
Sbjct: 19652 IIPIDNGSNMLILNPTQ-SDSGIYICITTNETYCDMMSLNLTIVSVSESNIDL---ISYP 19819
Query: 132 QIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVT 191
QIV + G+++CP++ F N+N +I W + L +KRL I I +V
Sbjct: 19820 QIVNERSTGEMVCPNINAFI-ASNVNADIIWSGHRR---LRNKRLK-QRTPGIITIEDVR 19984
Query: 192 IQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVME 251
D G YTC + Y Y GK YNV+R + LEV++ + P P + +GS++ +
Sbjct: 19985 KNDAGYYTCVLEYIYRGKTYNVTRIVKLEVRDRII--HPTMQLPEG--VVTSIGSNLTIA 20152
Query: 252 CNVS 255
C VS
Sbjct: 20153 CRVS 20164
>gb|U94848.1|U94848 Vaccinia virus strain Ankara, complete genomic sequence
Length = 177923
Score = 80.5 bits (197), Expect = 4e-13
Identities = 85/313 (27%), Positives = 140/313 (44%), Gaps = 18/313 (5%)
Frame = +3
Query: 21 FSAEECV-----ICNYFVLVGEPTAISCPVITLPMLHSDYNLT---WYRNGSNMPITTER 72
F+A EC+ ++ L EP + CP I L S YN+ W + G++ +R
Sbjct: 162081 FNAPECIDKGQYFASFMELENEPVILPCPQINT--LSSGYNILDILWEKRGAD----NDR 162242
Query: 73 RARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFK-NDNGLCFNGEMKYD 131
I +L P DSG+Y C + +NL + +++ + + Y
Sbjct: 162243 IIPIDNGSNMLILNPTQ-SDSGIYICITTNETYCDMMSLNLTIVSVSESNIDL---ISYP 162410
Query: 132 QIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVT 191
QIV + G+++CP++ F N+N +I W + L +KRL I I +V
Sbjct: 162411 QIVNERSTGEMVCPNINAFI-ASNVNADIIWSGHRR---LRNKRLK-QRTPGIITIEDVR 162575
Query: 192 IQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVME 251
D G YTC + Y Y GK YNV+R + LEV++ K+ P + + +GS++ +
Sbjct: 162576 KNDAGYYTCVLEYIYGGKTYNVTRIVKLEVRD---KIIPSTMQLPEGVV-TSIGSNLTIA 162743
Query: 252 CNVS-------SGVYGLL--PYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNIS 302
C VS + V+ + Y++ +D D D S + + M V ++ NI+
Sbjct: 162744 CRVSLRPPTTDADVFWISNGMYYEEDDGDGDGRISVANKIY----MTDKRRVITSRLNIN 162911
Query: 303 EVKLKDYAYKFFC 315
VK +D A F C
Sbjct: 162912 PVKEED-ATTFTC 162947
>gb|AF095689.1|AF095689 Vaccinia virus (strain Tian Tan) complete genome
Length = 189274
Score = 80.5 bits (197), Expect = 4e-13
Identities = 70/246 (28%), Positives = 111/246 (44%), Gaps = 11/246 (4%)
Frame = +1
Query: 21 FSAEECV-----ICNYFVLVGEPTAISCPVITLPMLHSDYNLT---WYRNGSNMPITTER 72
F+A EC+ ++ L EP + CP I L S YN+ W + G++ +R
Sbjct: 174874 FNASECIDKGQYFASFMELENEPVILPCPQINT--LSSGYNILDILWEKRGAD----NDR 175035
Query: 73 RARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINL---KVFKNDNGLCFNGEMK 129
I +L P DSG+Y C + +NL V +++ L +
Sbjct: 175036 IIPIDNGSNMLILNPTQ-SDSGIYICITTNETYCDMMSLNLTIVSVLESNIDL-----IS 175197
Query: 130 YDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILN 189
Y QIV + G+++CP++ F N+N +I W + L +KRL I I +
Sbjct: 175198 YPQIVNERSTGEMVCPNINAFI-ASNVNADIIWSGHRR---LRNKRLK-QRTPGIITIED 175362
Query: 190 VTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVV 249
V D G YTC + Y Y GK YNV+R + LEV++ + + + I +GS++
Sbjct: 175363 VRKNDAGYYTCVLEYIYRGKTYNVTRIVKLEVRDKIIPSTMQL----PDGIVTSIGSNLT 175530
Query: 250 MECNVS 255
+ C VS
Sbjct: 175531 IACRVS 175548
>dbj|D11079.1|VACRHF Vaccinia virus genomic DNA, 42kbp from near the right ITR
Length = 42090
Score = 79.7 bits (195), Expect = 7e-13
Identities = 68/244 (27%), Positives = 111/244 (44%), Gaps = 9/244 (3%)
Frame = +3
Query: 21 FSAEECV-----ICNYFVLVGEPTAISCPVITLPMLHSDYNLT---WYRNGSNMPITTER 72
F+A EC+ ++ L EP + CP I L S YN+ W + G++ +R
Sbjct: 33162 FNAPECIDKGQYFASFMELENEPVILPCPQINT--LSSGYNILDILWEKRGAD----NDR 33323
Query: 73 RARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFK-NDNGLCFNGEMKYD 131
I +L P DSG+Y C + +NL + +++ + + Y
Sbjct: 33324 IIPIDNGSNMLILNPTQ-SDSGIYICITTNETYCDMMSLNLTIVSVSESNIDL---ISYP 33491
Query: 132 QIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVT 191
QIV + G+++CP++ F N+N +I W + L +KRL I I +V
Sbjct: 33492 QIVNERSTGEMVCPNINAFI-ASNVNADIIWSGHRR---LRNKRLK-QRTPGIITIEDVR 33656
Query: 192 IQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVME 251
D G YTC + Y Y GK YNV+R + LEV++ + + + I +GS++ +
Sbjct: 33657 KNDAGYYTCVLEYIYGGKTYNVTRIVKLEVRDKIIPSTMQL----PDGIVTSIGSNLTIA 33824
Query: 252 CNVS 255
C VS
Sbjct: 33825 CRVS 33836
>emb|X56121.1|VVB15RG Vaccinia virus B15R gene for 36.5 kDa protein
Length = 1200
Score = 79.7 bits (195), Expect = 7e-13
Identities = 68/244 (27%), Positives = 111/244 (44%), Gaps = 9/244 (3%)
Frame = +1
Query: 21 FSAEECV-----ICNYFVLVGEPTAISCPVITLPMLHSDYNLT---WYRNGSNMPITTER 72
F+A EC+ ++ L EP + CP I L S YN+ W + G++ +R
Sbjct: 181 FNAPECIDKGQYFASFMELENEPVILPCPQINT--LSSGYNILDILWEKRGAD----NDR 342
Query: 73 RARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFK-NDNGLCFNGEMKYD 131
I +L P DSG+Y C + +NL + +++ + + Y
Sbjct: 343 IIPIDNGSNMLILNPTQ-SDSGIYICITTNETYCDMMSLNLTIVSVSESNIDL---ISYP 510
Query: 132 QIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVT 191
QIV + G+++CP++ F N+N +I W + L +KRL I I +V
Sbjct: 511 QIVNERSTGEMVCPNINAFI-ASNVNADIIWSGHRR---LRNKRLK-QRTPGIITIEDVR 675
Query: 192 IQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVME 251
D G YTC + Y Y GK YNV+R + LEV++ + + + I +GS++ +
Sbjct: 676 KNDAGYYTCVLEYIYGGKTYNVTRIVKLEVRDKIIPSTMQL----PDGIVTSIGSNLTIA 843
Query: 252 CNVS 255
C VS
Sbjct: 844 CRVS 855
>dbj|D01018.1|VACB15RW Vaccinia virus DNA for B15R protein, complete cds
Length = 1200
Score = 79.7 bits (195), Expect = 7e-13
Identities = 68/244 (27%), Positives = 111/244 (44%), Gaps = 9/244 (3%)
Frame = +1
Query: 21 FSAEECV-----ICNYFVLVGEPTAISCPVITLPMLHSDYNLT---WYRNGSNMPITTER 72
F+A EC+ ++ L EP + CP I L S YN+ W + G++ +R
Sbjct: 181 FNAPECIDKGQYFASFMELENEPVILPCPQINT--LSSGYNILDILWEKRGAD----NDR 342
Query: 73 RARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFK-NDNGLCFNGEMKYD 131
I +L P DSG+Y C + +NL + +++ + + Y
Sbjct: 343 IIPIDNGSNMLILNPTQ-SDSGIYICITTNETYCDMMSLNLTIVSVSESNIDL---ISYP 510
Query: 132 QIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVT 191
QIV + G+++CP++ F N+N +I W + L +KRL I I +V
Sbjct: 511 QIVNERSTGEMVCPNINAFI-ASNVNADIIWSGHRR---LRNKRLK-QRTPGIITIEDVR 675
Query: 192 IQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVME 251
D G YTC + Y Y GK YNV+R + LEV++ + + + I +GS++ +
Sbjct: 676 KNDAGYYTCVLEYIYGGKTYNVTRIVKLEVRDKIIPSTMQL----PDGIVTSIGSNLTIA 843
Query: 252 CNVS 255
C VS
Sbjct: 844 CRVS 855
>gb|M95202.1|PXRIL1XX Poxvirus interleukin-1 binding protein (IL1) gene, complete cds
Length = 1102
Score = 79.3 bits (194), Expect = 9e-13
Identities = 73/271 (26%), Positives = 124/271 (44%), Gaps = 18/271 (6%)
Frame = +3
Query: 21 FSAEECV-----ICNYFVLVGEPTAISCPVITLPMLHSDYNLT---WYRNGSNMPITTER 72
F+A EC+ ++ L EP + CP I + S YN+ W + G++ +R
Sbjct: 117 FNAPECIDKGQYFASFMELENEPVILPCPQINT--ISSGYNILDILWEKRGAD----NDR 278
Query: 73 RARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFK-NDNGLCFNGEMKYD 131
I +L P DSG+Y C ++ +NL + +++ + + Y
Sbjct: 279 IIPIDNGSNMLILNPTQ-SDSGIYICITKNETYCDMMSLNLTIVSVSESNIDL---ISYT 446
Query: 132 QIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVT 191
QIV G+++CP++ F N+N +I W + L +KRL I I +V
Sbjct: 447 QIVNERTTGEMVCPNINAFI-ASNVNADIIWSGHRR---LRNKRL-RQRTPGIITIEDVR 611
Query: 192 IQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVME 251
D G YTC + YTY K Y+V+R + LEV++ + P P+ + +GS++ +
Sbjct: 612 KNDAGYYTCVLKYTYGDKTYDVTRIVKLEVRDRMIP--PTMQLPDG--VVTSIGSNLTIA 779
Query: 252 CNVS-------SGVYGLL--PYWQVNDEDVD 273
C VS + V+ + Y++ +DED D
Sbjct: 780 CRVSLRPPTTDADVFWISNGMYYEEDDEDGD 872
>gb|BC004628.1|BC004628 Mus musculus, clone IMAGE:3585952, mRNA
Length = 728
Score = 77.0 bits (188), Expect = 4e-12
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Frame = +2
Query: 22 SAEECVICNYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKG 81
+ E+ + N + G+P +C P + NLTWY+ S P++ R R+HQ +
Sbjct: 260 TCEDIFMHNVIISEGQPFPFNCTYP--PETNGAVNLTWYKTPSKSPVSNNRHLRVHQDQT 433
Query: 82 LLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKND------NGLCFNGEMKYDQIVK 135
+ F+P LEDSG+Y+C +R+ + Q +NL V KN G N Y QI+
Sbjct: 434 WILFLPLTLEDSGIYQCVIRNAHNCYQIAVNLTVLKNHWCDSSMEGSPVNSPDVYQQILP 613
Query: 136 SANAGKIICPDLENFKDEDNINPEIHWYK 164
+G + C + E I WYK
Sbjct: 614 IGKSGSLNC---HLYFPESCALDSIKWYK 691
>ref|XM_013114.2| Homo sapiens interleukin 1 receptor accessory protein-like 1
(IL1RAPL1), mRNA
Length = 2217
Score = 73.6 bits (179), Expect = 5e-11
Identities = 57/197 (28%), Positives = 98/197 (48%), Gaps = 10/197 (5%)
Frame = +1
Query: 358 VYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLYPK------NRESCLYSSDIFALK 411
+YK +KI+I+L+YR+ H + D K YDAY+ Y K N+E+ + FAL+
Sbjct: 352 IYKCYKIEIMLFYRN--HFGAEELDGDNKDYDAYLSYTKVDPDQWNQETG--EEERFALE 519
Query: 412 ILPEVLERQCGYNLFIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDAS- 470
ILP++LE+ GY LFI R+ + I+ + QS+R+II++ P Y + S
Sbjct: 520 ILPDMLEKHYGYKLFIPDRDLIPTGTYIEDVARCVDQSKRLIIVMTPN---YVVRRGWSI 690
Query: 471 -EKHLAVYNALIQDGXXXXXXXXXXXXDYANMP--ESIKYVKQKYGAIRWTGDFSERSHS 527
E + N L+ N E++K+ + I+W G + +
Sbjct: 691 FELETRLRNMLVTGEIKVILIECSELRGIMNYQEVEALKHTIKLLTVIKWHG---PKCNK 861
Query: 528 ASTRFWKKVRYHMPSRK 544
+++FWK+++Y MP ++
Sbjct: 862 LNSKFWKRLQYEMPFKR 912
>emb|AJ276474.2|OMY276474 Oncorhynchus mykiss mRNA for interleukin-1 receptor type II
(IL-1rII gene)
Length = 1560
Score = 73.2 bits (178), Expect = 6e-11
Identities = 73/253 (28%), Positives = 100/253 (38%), Gaps = 50/253 (19%)
Frame = +1
Query: 72 RRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNG----- 126
+ R+ QR+ LW +PA DSG Y C +++ND LC G
Sbjct: 352 KEGRVLQRERQLWLLPARTSDSGAYSC----------------IYRNDT-LCVIGSFTLQ 480
Query: 127 --EMKYDQIVK-----SANAGK---IICPDLENFKDEDNINPEIHWYKECKSGFLE-DKR 175
E K I K S GK I CP L++F D EI WYK+ L
Sbjct: 481 VYETKQTDIEKLSYPISTPVGKKLSIRCPHLKDFNRTD----EIEWYKDSSPTVLPVGSG 648
Query: 176 LVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVK------------- 222
+ ++ ILI +V D+G YTC++ QY VSRT+NL VK
Sbjct: 649 RYQRQRQDVILISDVRPADQGLYTCQLRVHVNNLQYTVSRTINLNVKVPDPVPYIQTTRP 828
Query: 223 -----------------ESPLKMRPEFIYPNNNTI-EVELGSHVVMECNVSSG---VYGL 261
E P + P+ + P N TI E LGS + + C V +G
Sbjct: 829 IFDPDTTLTPNPGLSTVEPPAVVSPKIVSPANGTIFESPLGSVLEISCQVFTGSQSADAT 1008
Query: 262 LPYWQVNDEDVDS 274
+ W V+ +DS
Sbjct: 1009MVTWLVDGHSLDS 1047
>dbj|AB041748.1|AB041740S9 Gallus gallus gene for ST2L, ST2LV, complete cds
Length = 1858
Score = 72.0 bits (175), Expect = 1e-10
Identities = 36/108 (33%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Frame = +2
Query: 443 DEKIHQSRRVIIILVPEP-SCYGILEDASEKHLAVYNALIQDGXXXXXXXXXXXXDYANM 501
+++I +SRR+II+L + +C + D +H+A+YNALIQ+ Y N+
Sbjct: 257 EKRIQKSRRLIILLTQQLINCQELNYD---QHIALYNALIQNDTKVILLEMEKMGSYENL 427
Query: 502 PESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRKHGSSS 549
ES++Y+ ++ G ++W + S++++FWK VRYHMP S S
Sbjct: 428 QESLRYIIKQQGTVKWKEQHTVHPQSSNSKFWKHVRYHMPVTLRSSDS 571
>emb|AJ277110.1|EVI277110 Ectromelia virus IL1RB for Interleukin 1 beta receptor
Length = 987
Score = 71.6 bits (174), Expect = 2e-10
Identities = 81/313 (25%), Positives = 136/313 (42%), Gaps = 18/313 (5%)
Frame = +1
Query: 21 FSAEECV-----ICNYFVLVGEPTAISCPVITLPMLHSDYN---LTWYRNGSNMPITTER 72
F+ EC+ ++ L EP + CP I L S YN + W + G++ +
Sbjct: 61 FNNIECIDNGLYFTSFMELEKEPVILPCPQINT--LSSGYNVLDIIWEKRGAD----NDN 222
Query: 73 RARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQ 132
I +L P DSG+Y C ++ +NL + + + Y Q
Sbjct: 223 IIPIDNGTNMLILNPTQT-DSGIYICITKNETYCDMMSLNLTIVTDTESNI--DLISYPQ 393
Query: 133 IVKSANAGKIICPDLENFKDED-NINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVT 191
IV + G+++CP++ F + +++ ++ W + L +KRL I I +V
Sbjct: 394 IVNERSTGEMVCPNINAFIARNKDVDVDVIWRGHPR---LRNKRLT-QRPIGIITIEDVR 561
Query: 192 IQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVME 251
D G YTC + YTY K Y V+R + LEV++ + P P + LGS++ +
Sbjct: 562 KNDAGYYTCVLKYTYRDKTYEVTRIVKLEVRDRIIP--PTMQLP--VVVMTSLGSNLTIA 729
Query: 252 CNVS-------SGVYGLL--PYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNIS 302
C VS + V+ + Y++ +DED D T R ++ V ++ NI+
Sbjct: 730 CRVSLRPPTIDADVFWISNNEYYEEDDEDSDGRSVTNRIFTIDKR-----RVITSRLNIN 894
Query: 303 EVKLKDYAYKFFC 315
VK +D A F C
Sbjct: 895 PVK-EDDATTFTC 930
>gb|AF012825.1|AF012825 Ectromelia virus envelope glycoprotein C1R (C1R), C2R (C2R), C3R
(C3R), IFN-gamma binding protein C4R (C4R), C5R (C5R),
protein kinase C6R (C6R), serpin C7R (C7R), C8R (C8R),
IL-1 beta binding protein C9R (C9R), C10L (C10L), C11R
(C11R), IFN-alpha/beta>
Length = 32318
Score = 71.6 bits (174), Expect = 2e-10
Identities = 81/313 (25%), Positives = 136/313 (42%), Gaps = 18/313 (5%)
Frame = +3
Query: 21 FSAEECV-----ICNYFVLVGEPTAISCPVITLPMLHSDYN---LTWYRNGSNMPITTER 72
F+ EC+ ++ L EP + CP I L S YN + W + G++ +
Sbjct: 7968 FNNIECIDNGLYFTSFMELEKEPVILPCPQINT--LSSGYNVLDIIWEKRGAD----NDN 8129
Query: 73 RARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQ 132
I +L P DSG+Y C ++ +NL + + + Y Q
Sbjct: 8130 IIPIDNGTNMLILNPTQT-DSGIYICITKNETYCDMMSLNLTIVTDTESNI--DLISYPQ 8300
Query: 133 IVKSANAGKIICPDLENFKDED-NINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVT 191
IV + G+++CP++ F + +++ ++ W + L +KRL I I +V
Sbjct: 8301 IVNERSTGEMVCPNINAFIARNKDVDVDVIWRGHPR---LRNKRLT-QRPIGIITIEDVR 8468
Query: 192 IQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVME 251
D G YTC + YTY K Y V+R + LEV++ + P P + LGS++ +
Sbjct: 8469 KNDAGYYTCVLKYTYRDKTYEVTRIVKLEVRDRIIP--PTMQLP--VVVMTSLGSNLTIA 8636
Query: 252 CNVS-------SGVYGLL--PYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNIS 302
C VS + V+ + Y++ +DED D T R ++ V ++ NI+
Sbjct: 8637 CRVSLRPPTIDADVFWISNNEYYEEDDEDSDGRSVTNRIFTIDKR-----RVITSRLNIN 8801
Query: 303 EVKLKDYAYKFFC 315
VK +D A F C
Sbjct: 8802 PVK-EDDATTFTC 8837
>gb|BC020296.1|BC020296 Mus musculus, clone IMAGE:4008181, mRNA
Length = 1664
Score = 67.0 bits (162), Expect = 5e-09
Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 4/243 (1%)
Frame = +2
Query: 33 VLVGEPTAISCPVITLPMLHSDY-NLTWYRNGSN---MPITTERRARIHQRKGLLWFIPA 88
V+ GEP + I+ P+ ++ + W++ ++ + R+ L F P
Sbjct: 230 VVEGEPFYLKPCGISAPVHRNETATMRWFKGSASHEYRELNNRSSPRVTFHDHTLEFWPV 409
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
+ED G Y +V + R+ L V K + CF+ ++ + V+ + I C +
Sbjct: 410 EMEDEGTYISQVGNDRRNW----TLNVTKRNKHSCFSDKLVTSRDVEVNKSLHITCKN-- 571
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
+ + + + YK CK + +L + E D+G Y+C + G
Sbjct: 572 --PNYEELIQDTWLYKNCKE--ISKTPRILKDAE---------FGDEGYYSCVFSVHHNG 712
Query: 209 KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVN 268
YN+++T+N+ V E K+ P + P + VELG +V + C+ S L YW +
Sbjct: 713 TWYNITKTVNITVIEGRSKVTPAILGPKCEKVGVELGKNVELNCSASLNKDDLF-YWSIR 889
Query: 269 DED 271
ED
Sbjct: 890 KED 898
>dbj|AB041747.1|AB041740S8 Gallus gallus st2 gene, exon 11
Length = 545
Score = 61.2 bits (147), Expect = 2e-07
Identities = 25/60 (41%), Positives = 40/60 (66%)
Frame = +3
Query: 382 VSDGKIYDAYVLYPKNRESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLAGEAVIDV 441
++DGKIYDAYV+YP++ + + F +I+P++LE +CGY L I+GR+ GE +
Sbjct: 243 LADGKIYDAYVIYPRSHSTEATFVEYFVYQIMPDILENKCGYTLCIYGRDTYPGEGKFQI 422
>gb|AC007165.3|AC007165 Homo sapiens BAC clone RP11-451C2, complete sequence
Length = 45813
Score = 56.6 bits (135), Expect = 6e-06
Identities = 29/73 (39%), Positives = 38/73 (51%), Gaps = 3/73 (4%)
Frame = -1
Query: 32 FVLVGEPTAISCPVITLPMLHS---DYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPA 88
F L GEP A+ CP + + S NLTW++N S + E R+ + G LW +PA
Sbjct: 38076 FRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPA 37897
Query: 89 ALEDSGLYECEVR 101
EDSG Y C R
Sbjct: 37896 LQEDSGTYVCTTR 37858
Score = 44.7 bits (104), Expect = 0.024
Identities = 16/58 (27%), Positives = 36/58 (61%)
Frame = -1
Query: 172 EDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMR 229
++++ + G +L+ +V ++D G Y C + + + G+QYN++R++ L +K L +R
Sbjct: 28026 DNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKSKYLPLR 27853
Score = 39.7 bits (91), Expect = 0.77
Identities = 21/65 (32%), Positives = 36/65 (55%)
Frame = -3
Query: 100 VRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPE 159
+R+ + + I L+VF+N + F + Y QI+ + +G ++CPDL F D + +
Sbjct: 31819 IRNASYCDKMSIELRVFENTDA--FLPFISYPQILTLSTSGVLVCPDLSEF-TRDKTDVK 31649
Query: 160 IHWYK 164
I WYK
Sbjct: 31648 IQWYK 31634
>gb|AF325528.1|AF325528 Lumpy skin disease virus isolate Neethling 2490, complete genome
Length = 150773
Score = 55.5 bits (132), Expect = 1e-05
Identities = 44/205 (21%), Positives = 79/205 (38%), Gaps = 20/205 (9%)
Frame = -2
Query: 37 EPTAISCPV------ITLPMLHSDYNLTW--------------YRNGSNMPITTERRARI 76
+P + CP+ I + Y++TW Y+N + + E +R+
Sbjct: 3553 DPAFLKCPLDNYKKSIFFKKNITSYDITWFQTNSLSFVRNYNDYKNFKKIEVNNENASRV 3374
Query: 77 HQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKS 136
LW P D G+Y C RS N ++ I L + + + ++++ + S
Sbjct: 3373 QLIGNNLWLYPVINIDDGIYICRFRSHNICEEMSIKLTFLDKEETITY----RFNEGLNS 3206
Query: 137 ANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKG 196
+ C D++ N + WYK +D+ + E ++I N T D G
Sbjct: 3205 T----VHCMDIDLISSYFK-NKTLDWYKNNNKVLYDDR---IQSNELKLVIKNTTHDDSG 3050
Query: 197 NYTCRMVYTYMGKQYNVSRTMNLEV 221
YTC + Y++ R N+ V
Sbjct: 3049 IYTCNLRINKDSINYDIKRNYNVVV 2975
Score = 50.4 bits (119), Expect = 4e-04
Identities = 63/300 (21%), Positives = 121/300 (40%), Gaps = 24/300 (8%)
Frame = -3
Query: 41 ISCPVITLPMLHSDYNLTWYRNGSNMPITT----------ERRARIHQRKGLLWFIPAAL 90
+ CP + L+ + + W+ N + T + R++ LW
Sbjct: 9798 VKCPYVDT--LNYNTTVKWFLVNYNKYVKTGDVKKSFHEFKNTDRVYSVGHSLWINNITK 9625
Query: 91 EDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENF 150
DSG+Y C V + + L V+K + + ++ +++C + +NF
Sbjct: 9624 NDSGIYACNVHNSTYYFTSSVMLDVYKKET---------INSVI--GTNYELLCINTKNF 9478
Query: 151 KDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMV------- 203
+ N + E++W+K+ + + + + +LI N++ D+G Y C +
Sbjct: 9477 INTFNCSYEVNWFKDREK---INNNFKYKKSKEKLLIRNISKSDEGVYLCSITTDTRCNP 9307
Query: 204 YTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSS----GVY 259
K+Y + + K+ + + F+ N+TI LG + +MEC S VY
Sbjct: 9306 KNLALKRYYHNNVIKKRFKDD-INLTVNFL---NSTI--ALGKNFLMECIGESKNIQRVY 9145
Query: 260 GLLPYWQVNDEDVDSFD---STYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCH 316
G +W +N +V +D + Y + G + IA+ I EVK K + F C+
Sbjct: 9144 GSSIFWLINGVNVLDYDRSKNIYLGREMYVGNSYKIALI-----IKEVKRKYLSANFTCN 8980
Score = 45.8 bits (107), Expect = 0.011
Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 11/229 (4%)
Frame = +1
Query: 37 EPTAISCPVITLP------MLHSDYNLTW--YRNGSNMPITTERRARIHQRKGLLWFIPA 88
EP ++ CP++ M DY + W RN + I + + G L + A
Sbjct: 128533 EPLSLKCPLLNEYGLKWPYMEKDDYEIKWEVVRNYTKKSINNNTNNYLIE-DGKLLILKA 128709
Query: 89 ALED-SGLYECEV--RSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICP 145
L + Y C + + N Q I+ L ++N N NG +K IV +
Sbjct: 128710 NLNTLNSKYLCTITRKRDNDCDQSIVRLSRYRNKNCYKLNG-LKGRNIVIECGVRHVEYD 128886
Query: 146 DLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYT 205
+E WYK+ K+ ++ + + I+I N+T D G Y C+ Y+
Sbjct: 128887 TVE-------------WYKQNKTSIIKLNN----DSKRRIIIRNITKGDSGKYYCKGHYS 129015
Query: 206 YMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNV 254
+ Y +SR L V S E +Y I V +G + + C+V
Sbjct: 129016 KLNISYTISRCTYLSV-FSLSHYEYELVY-MPTIINVTIGEPMTVNCSV 129156
>ref|XM_053531.3| Homo sapiens fibulin 6 (FIBL-6), mRNA
Length = 18206
Score = 53.9 bits (128), Expect = 4e-05
Identities = 56/238 (23%), Positives = 91/238 (37%), Gaps = 13/238 (5%)
Frame = +3
Query: 28 ICNYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIP 87
+ N VL+ + T + C V P + WY++ N+ +T + +L
Sbjct: 4329 VTNVSVLLNQLTNLFCEVEGTP----SPIIMWYKD--NVQVTESSTIQTVNNGKILKLFR 4490
Query: 88 AALEDSGLYECEVRSLNRSKQKIINLKV----------FKNDNGLCFNGEMKYDQIVKSA 137
A ED+G Y C+ ++ + QK N+ V F N+ + N ++ + VK
Sbjct: 4491 ATPEDAGRYSCKAINIAGTSQKYFNIDVLVPPTIIGTNFPNEVSVVLNRDVALECQVKGT 4670
Query: 138 NAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGN 197
P+IHW+K+ K FL D + L + + + N DKG
Sbjct: 4671 PF------------------PDIHWFKDGKPLFLGDPNVELLDRGQVLHLKNARRNDKGR 4796
Query: 198 YTCRMVYTYMGKQYNVSRTMNLEVKESPLKM-RPEFIYPNNNT--IEVELGSHVVMEC 252
Y C VS + K+ L + P I N T I V + S + +EC
Sbjct: 4797 YQC-----------TVSNAAGKQAKDIKLTIYNPPSIKGGNVTTDISVLINSLIKLEC 4937
Score = 53.5 bits (127), Expect = 5e-05
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 1/197 (0%)
Frame = +2
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N V+ +++C +P+ ++TW+++G P++ RI +L +
Sbjct: 7412 NISVVEKNSVSLTCEASGIPLP----SITWFKDG--WPVSLSNSVRILSGGRMLRLMQTT 7573
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQI-VKSANAGKIICPDLE 148
+ED+G Y C VR+ ++KI L V + GE + + VK + + C
Sbjct: 7574 MEDAGQYTCVVRNAAGEERKIFGLSVLVPPH---IVGENTLEDVKVKEKQSVTLTC---- 7732
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
+ N PEI W+K+ + ED+ + G + I NV + G YTC + + G
Sbjct: 7733 --EVTGNPVPEITWHKDGQP-LQEDEAHHIISGGRFLQITNVQVPHTGRYTC-LASSPAG 7900
Query: 209 KQYNVSRTMNLEVKESP 225
+ SR+ +L V SP
Sbjct: 7901 HK---SRSFSLNVFVSP 7942
Score = 47.4 bits (111), Expect = 0.004
Identities = 48/186 (25%), Positives = 81/186 (42%), Gaps = 4/186 (2%)
Frame = +2
Query: 33 VLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITT-ERRARIHQRKGLLWFIPAALE 91
V+V P + C +P +LTW ++GS P+++ ++ +L A +
Sbjct: 6296 VVVNNPVRLECEARGIPAP----SLTWLKDGS--PVSSFSNGLQVLSGGRILALTSAQIS 6457
Query: 92 DSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFK 151
D+G Y C + KQ+ I+L+V+ N + GE + N +I +E
Sbjct: 6458 DTGRYTCVAVNAAGEKQRDIDLRVYVPPNIM---GEEQ--------NVSVLISQAVELLC 6604
Query: 152 DEDNINPE-IHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRM--VYTYMG 208
D I P + W K+ L+ L ++E + + I + +QD G YTC V
Sbjct: 6605 QSDAIPPPTLTWLKDGHP-LLKKPGLSISENRSVLKIEDAQVQDTGRYTCEATNVAGKTE 6781
Query: 209 KQYNVS 214
K YNV+
Sbjct: 6782 KNYNVN 6799
Score = 38.1 bits (87), Expect = 2.2
Identities = 42/169 (24%), Positives = 69/169 (39%), Gaps = 1/169 (0%)
Frame = +2
Query: 33 VLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALED 92
VL G T+++C P ++ W R+G P+ + + +L + A ED
Sbjct: 10568 VLKGSSTSMACITDGTPAP----SMAWLRDGQ--PLGLDAHLTVSTHGMVLQLLKAETED 10729
Query: 93 SGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKD 152
SG Y C + K LKV + + NG ++++I I+ LE
Sbjct: 10730 SGKYTCIASNEAGEVSKHFILKVLEPPH---INGSEEHEEI------SVIVNNPLELTCI 10882
Query: 153 EDNI-NPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
I P++ W K+ + D+ L GE + I ++D G YTC
Sbjct: 10883 ASGIPAPKMTWMKDGRPLPQTDQVQTLGGGE-VLRISTAQVEDTGRYTC 11026
Score = 37.7 bits (86), Expect = 2.9
Identities = 52/249 (20%), Positives = 94/249 (36%), Gaps = 4/249 (1%)
Frame = +2
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N V+V T ++C +P ++ W +NG + + + + G L I +
Sbjct: 11663 NMTVIVNVQTTLACEATGIPKP----SINWRKNGHLLNVDQNQNSYRLLSSGSLVIISPS 11830
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKV----FKNDNGLCFNGEMKYDQIVKSANAGKIICP 145
++D+ YEC V + ++ ++L V D F K+ V + A + P
Sbjct: 11831 VDDTATYECTVTNGAGDDKRTVDLTVQVPPSIADEPTDFL-VTKHAPAVITCTASGVPFP 12007
Query: 146 DLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYT 205
+ K+ + P Y+ SG AI IL + G YTC
Sbjct: 12008 SIHWTKNGIRLLPRGDGYRILSSG--------------AIEILATQLNHAGRYTC----V 12133
Query: 206 YMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYW 265
+ R + L V E P+ I P + + V L + +++ C ++G W
Sbjct: 12134 ARNAAGSAHRHVTLHVHEPPV------IQPQPSELHVILNNPILLPCE-ATGTPSPFITW 12292
Query: 266 QVNDEDVDS 274
Q +V++
Sbjct: 12293 QKEGINVNT 12319
Score = 36.6 bits (83), Expect = 6.5
Identities = 53/228 (23%), Positives = 79/228 (34%), Gaps = 2/228 (0%)
Frame = +3
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N V GE ++C +I+ DYNLTW RN ++ + R R L
Sbjct: 1812 NVTVTPGERAVLTCLIISAV----DYNLTWQRNDRDVRLAEPARIRTLANLS-LELKSVK 1976
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLEN 149
D+G Y C V S S + L V + M +Q + I+C
Sbjct: 1977 FNDAGEYHCMVSSEGGSSAASVFLTVQEPPKVTV----MPKNQSFTGGSEVSIMCSATGY 2144
Query: 150 FKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGK 209
K P+I W F+ + + I N +D G Y C
Sbjct: 2145 PK------PKIAW--TVNDMFIVGSHRYRMTSDGTLFIKNAAPKDAGIYGCL-------- 2276
Query: 210 QYNVSRTMNLEVKESPLKM--RPEFIYPNNNTIEVELGSHVVMECNVS 255
S + + + S L+ P+ + + + V LG VMEC S
Sbjct: 2277 ---ASNSAGTDKQNSTLRYIEAPKLMVVQSELL-VALGDITVMECKTS 2408
Score = 36.2 bits (82), Expect = 8.5
Identities = 50/232 (21%), Positives = 89/232 (37%), Gaps = 7/232 (3%)
Frame = +2
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N VL+ + + C +P LTW ++G P+ + I + + +L A
Sbjct: 6563 NVSVLISQAVELLCQSDAIP----PPTLTWLKDGH--PLLKKPGLSISENRSVLKIEDAQ 6724
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQI-VKSANAGKIICPDLE 148
++D+G Y CE ++ +K N+ ++ N G + Q+ V N ++C
Sbjct: 6725 VQDTGRYTCEATNVAGKTEKNYNVNIWVPPN---IGGSDELTQLTVIEGNLISLLC---- 6883
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDK--RLVLAEGENAILILNVTIQDKGNYTC--RMVY 204
+ I P +K+ S L D R+ + G + I D Y+C V
Sbjct: 6884 ---ESSGIPPPNLIWKKKGSPVLTDSMGRVRILSGGRQLQISIAEKSDAALYSCVASNVA 7054
Query: 205 TYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIE--VELGSHVVMECNV 254
K+YN+ + +RP ++ E V G + +EC V
Sbjct: 7055 GTAKKEYNLQ-----------VYIRPTITNSGSHPTEIIVTRGKSISLECEV 7177
>dbj|AK056557.1|AK056557 Homo sapiens cDNA FLJ31995 fis, clone NT2RP7009236, weakly similar to
BASEMENT MEMBRANE-SPECIFIC HEPARAN SULFATE PROTEOGLYCAN
CORE PROTEIN PRECURSOR
Length = 3870
Score = 53.1 bits (126), Expect = 7e-05
Identities = 56/238 (23%), Positives = 91/238 (37%), Gaps = 13/238 (5%)
Frame = +2
Query: 28 ICNYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIP 87
+ N VL+ + T + C V P + WY++ N+ +T + +L
Sbjct: 1427 VTNVSVLLNQLTNLFCEVEGTP----SPIIMWYKD--NVQVTESSTIQTVNNGRILKLFR 1588
Query: 88 AALEDSGLYECEVRSLNRSKQKIINLKV----------FKNDNGLCFNGEMKYDQIVKSA 137
A ED+G Y C+ ++ + QK N+ V F N+ + N ++ + VK
Sbjct: 1589 ATPEDAGRYSCKAINIAGTSQKYFNIDVLVPPTIIGTNFPNEVSVVLNRDVALECQVKGT 1768
Query: 138 NAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGN 197
P+IHW+K+ K FL D + L + + + N DKG
Sbjct: 1769 PF------------------PDIHWFKDGKPLFLGDPNVELLDRGQVLHLKNARRNDKGR 1894
Query: 198 YTCRMVYTYMGKQYNVSRTMNLEVKESPLKMR-PEFIYPNNNT--IEVELGSHVVMEC 252
Y C VS + K+ L + P I N T I V + S + +EC
Sbjct: 1895 YQC-----------TVSNAAGKQAKDIKLTIYIPPSIKGGNVTTDISVLINSLIKLEC 2035
Score = 45.8 bits (107), Expect = 0.011
Identities = 43/170 (25%), Positives = 75/170 (43%), Gaps = 2/170 (1%)
Frame = +2
Query: 33 VLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITT-ERRARIHQRKGLLWFIPAALE 91
V+V P + C +P +LTW ++GS P+++ ++ +L A +
Sbjct: 3395 VVVNNPVRLECEARGIPAP----SLTWLKDGS--PVSSFSNGLQVLSGGRILALTSAQIS 3556
Query: 92 DSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFK 151
D+G Y C + KQ+ I+L+V+ N + GE + N +I +E
Sbjct: 3557 DTGRYTCVAVNAAGEKQRDIDLRVYVPPNIM---GEEQ--------NVSVLISQAVELLC 3703
Query: 152 DEDNINPE-IHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
D I P + W K+ L+ L ++E + + I + +QD G YTC
Sbjct: 3704 QSDAIPPPTLTWLKDGHP-LLKKPGLSISENRSVLKIEDAQVQDTGRYTC 3850
Score = 39.7 bits (91), Expect = 0.77
Identities = 58/242 (23%), Positives = 100/242 (40%), Gaps = 1/242 (0%)
Frame = +2
Query: 37 EPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTER-RARIHQRKGLLWFIPAALEDSGL 95
+P A+ C +P + ++TW ++ + P+ T + +I +L LED+G
Sbjct: 2852 KPVALQCIANGIP----NPSITWLKD--DQPVNTAQGNLKIQSSGRVLQIAKTLLEDAGR 3013
Query: 96 YECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDN 155
Y C + Q+ I L V + + L G+M + ++ S N ++ C K N
Sbjct: 3014 YTCVATNAAGETQQHIQLHVHEPPS-LEDAGKMLNETVLVS-NPVQLEC------KAAGN 3169
Query: 156 INPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSR 215
P I WYK+ + L G+ I I + I D G Y C + + + S
Sbjct: 3170 PVPVITWYKDNRLLSGSTSMTFLNRGQ-IIDIESAQISDAGIYKCVAINSAGATELFYS- 3343
Query: 216 TMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVDSF 275
L+V +P I +NN + V + + V +EC + G+ W + V SF
Sbjct: 3344 ---LQVHVAP------SISGSNNMVAVVVNNPVRLECE-ARGIPAPSLTWLKDGSPVSSF 3493
Query: 276 DS 277
+
Sbjct: 3494 SN 3499
>gb|AF156100.1|AF156100 Homo sapiens hemicentin mRNA, complete cds
Length = 18207
Score = 52.4 bits (124), Expect = 1e-04
Identities = 50/197 (25%), Positives = 87/197 (43%), Gaps = 1/197 (0%)
Frame = +2
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N V+ +++C +P+ + TW+++G P++ RI +L +
Sbjct: 7415 NISVVEKNSVSLTCEASGIPLPST----TWFKDG--WPVSLSNSVRILSGGRMLRLMQTT 7576
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQI-VKSANAGKIICPDLE 148
+ED+G Y C VR+ ++KI L V + GE + + VK + + C
Sbjct: 7577 MEDAGQYTCVVRNAAGEERKIFGLSVLVPPH---IVGENTLEDVKVKEKQSVTLTC---- 7735
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
+ N PEI W+K+ + ED+ + G + I NV + G YTC + + G
Sbjct: 7736 --EVTGNPVPEITWHKDGQP-LQEDEAHHIISGGRFLQITNVQVPHTGRYTC-LASSPAG 7903
Query: 209 KQYNVSRTMNLEVKESP 225
+ SR+ +L V SP
Sbjct: 7904 HK---SRSFSLNVFVSP 7945
Score = 50.8 bits (120), Expect = 3e-04
Identities = 55/238 (23%), Positives = 90/238 (37%), Gaps = 13/238 (5%)
Frame = +2
Query: 28 ICNYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIP 87
+ N VL+ + T + C V P + WY++ N+ +T + +L
Sbjct: 4328 VSNVSVLLNQLTNLFCEVEGTP----SPIIMWYKD--NVQVTESSTIQTVNNGKILKLFR 4489
Query: 88 AALEDSGLYECEVRSLNRSKQKIINLKV----------FKNDNGLCFNGEMKYDQIVKSA 137
A ED+G Y C+ ++ + QK N+ V F + + N ++ + VK
Sbjct: 4490 ATPEDAGRYSCKAINIAGTSQKYFNIDVLVPPTIIGTNFPKEVSVVLNRDVALECQVKGT 4669
Query: 138 NAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGN 197
P+IHW+K+ K FL D + L + + + N DKG
Sbjct: 4670 PF------------------PDIHWFKDGKPLFLGDPNVELLDRGQVLHLKNARRNDKGR 4795
Query: 198 YTCRMVYTYMGKQYNVSRTMNLEVKESPLKMR-PEFIYPNNNT--IEVELGSHVVMEC 252
Y C VS + K+ L + P I N T I V + S + +EC
Sbjct: 4796 YQC-----------TVSNAAGKQAKDIKLTIYIPPSIKGGNVTTDISVLINSLIKLEC 4936
Score = 44.3 bits (103), Expect = 0.031
Identities = 42/170 (24%), Positives = 74/170 (42%), Gaps = 2/170 (1%)
Frame = +2
Query: 33 VLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITT-ERRARIHQRKGLLWFIPAALE 91
V+V P + C +P +LTW ++GS P+++ ++ +L +
Sbjct: 6296 VVVNNPVRLECEARGIPAP----SLTWLKDGS--PVSSFSNGLQVLSGGRILALTSTQIS 6457
Query: 92 DSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFK 151
D+G Y C + KQ+ I+L+V+ N + GE + N +I +E
Sbjct: 6458 DTGRYTCVAVNAAGEKQRDIDLRVYVPPNIM---GEEQ--------NVSVLISQAVELLC 6604
Query: 152 DEDNINPE-IHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
D I P + W K+ L+ L ++E + + I + +QD G YTC
Sbjct: 6605 QSDAIPPPTLTWLKDGHP-LLKKPGLSISENRSVLKIEDAQVQDTGRYTC 6751
Score = 38.1 bits (87), Expect = 2.2
Identities = 42/169 (24%), Positives = 69/169 (39%), Gaps = 1/169 (0%)
Frame = +2
Query: 33 VLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALED 92
VL G T+++C P ++ W R+G P+ + + +L + A ED
Sbjct: 10571 VLKGSSTSMACITDGTPAP----SMAWLRDGQ--PLGLDAHLTVSTHGMVLQLLKAETED 10732
Query: 93 SGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKD 152
SG Y C + K LKV + + NG ++++I I+ LE
Sbjct: 10733 SGKYTCIASNEAGEVSKHFILKVLEPPH---INGSEEHEEI------SVIVNNPLELTCI 10885
Query: 153 EDNI-NPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
I P++ W K+ + D+ L GE + I ++D G YTC
Sbjct: 10886 ASGIPAPKMTWMKDGRPLPQTDQVQTLGGGE-VLRISTAQVEDTGRYTC 11029
Score = 37.7 bits (86), Expect = 2.9
Identities = 58/242 (23%), Positives = 99/242 (39%), Gaps = 1/242 (0%)
Frame = +2
Query: 37 EPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTER-RARIHQRKGLLWFIPAALEDSGL 95
+P A+ C +P + ++TW ++ + P+ T + +I +L LED+G
Sbjct: 5753 KPVALQCIANGIP----NPSITWLKD--DQPVNTAQGNLKIQSSGRVLQIAKTLLEDAGR 5914
Query: 96 YECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDN 155
Y C + Q+ I L V + + L G+M + ++ S N ++ C K N
Sbjct: 5915 YTCVATNAAGETQQHIQLHVHEPPS-LEDAGKMLNETVLVS-NPVQLEC------KAAGN 6070
Query: 156 INPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSR 215
P I WYK+ L G+ I I + I D G Y C + + + S
Sbjct: 6071 PVPVITWYKDNCLLSGSTSMTFLNRGQ-IIDIESAQISDAGIYKCVAINSAGATELFYS- 6244
Query: 216 TMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVDSF 275
L+V +P I +NN + V + + V +EC + G+ W + V SF
Sbjct: 6245 ---LQVHVAP------SISGSNNMVAVVVNNPVRLECE-ARGIPAPSLTWLKDGSPVSSF 6394
Query: 276 DS 277
+
Sbjct: 6395 SN 6400
Score = 37.7 bits (86), Expect = 2.9
Identities = 52/249 (20%), Positives = 94/249 (36%), Gaps = 4/249 (1%)
Frame = +2
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N V+V T ++C +P ++ W +NG + + + + G L I +
Sbjct: 11666 NMTVIVNVQTTLACEATGIPKP----SINWRKNGHLLNVDQNQNSYRLLSSGSLVIISPS 11833
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKV----FKNDNGLCFNGEMKYDQIVKSANAGKIICP 145
++D+ YEC V + ++ ++L V D F K+ V + A + P
Sbjct: 11834 VDDTATYECTVTNGAGDDKRTVDLTVQVPPSIADEPTDFL-VTKHAPAVITCTASGVPFP 12010
Query: 146 DLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYT 205
+ K+ + P Y+ SG AI IL + G YTC
Sbjct: 12011 SIHWTKNGIRLLPRGDGYRILSSG--------------AIEILATQLNHAGRYTC----V 12136
Query: 206 YMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYW 265
+ R + L V E P+ I P + + V L + +++ C ++G W
Sbjct: 12137 ARNAAGSAHRHVTLHVHEPPV------IQPQPSELHVILNNPILLPCE-ATGTPSPFITW 12295
Query: 266 QVNDEDVDS 274
Q +V++
Sbjct: 12296 QKEGINVNT 12322
Score = 36.6 bits (83), Expect = 6.5
Identities = 53/228 (23%), Positives = 79/228 (34%), Gaps = 2/228 (0%)
Frame = +2
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N V GE ++C +I+ DYNLTW RN ++ + R R L
Sbjct: 1811 NVTVTPGERAVLTCLIISAV----DYNLTWQRNDRDVRLAEPARIRTLANLS-LELKSVK 1975
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLEN 149
D+G Y C V S S + L V + M +Q + I+C
Sbjct: 1976 FNDAGEYHCMVSSEGGSSAASVFLTVQEPPKVTV----MPKNQSFTGGSEVSIMCSATGY 2143
Query: 150 FKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGK 209
K P+I W F+ + + I N +D G Y C
Sbjct: 2144 PK------PKIAW--TVNDMFIVGSHRYRMTSDGTLFIKNAAPKDAGIYGCL-------- 2275
Query: 210 QYNVSRTMNLEVKESPLKM--RPEFIYPNNNTIEVELGSHVVMECNVS 255
S + + + S L+ P+ + + + V LG VMEC S
Sbjct: 2276 ---ASNSAGTDKQNSTLRYIEAPKLMVVQSELL-VALGDITVMECKTS 2407
>gb|AF157560.1|AF157560 Danio rerio fibroblast growth factor receptor 3 (fgfr3) mRNA,
complete cds
Length = 3002
Score = 52.0 bits (123), Expect = 2e-04
Identities = 66/267 (24%), Positives = 105/267 (38%), Gaps = 32/267 (11%)
Frame = +1
Query: 22 SAEECVICNYFVLVGEPTAISCPV--ITLPMLHSDYNLTWYRNGSNMPITTERRARIHQR 79
S E + +Y VG+ +SC LP++ W ++G +++ R R+ Q+
Sbjct: 649 SEVEVFLEDYVAGVGDTVVLSCTPQDFLLPIV-------WQKDGD--AVSSSNRTRVGQK 801
Query: 80 KGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQ------- 132
L I + EDSG+Y C + K +++ K + L + YD+
Sbjct: 802 A--LRIINVSYEDSGVYSCR----HAHKSMLLSNYTVKVIDSLSSGDDEDYDEDEDEAGN 963
Query: 133 -------------------IVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLED 173
V +AN K CP N P IHW K K F +
Sbjct: 964 GNAEAPYWTRSDRMEKKLLAVPAANTVKFRCPAA------GNPTPSIHWLKNGKE-FKGE 1122
Query: 174 KRL---VLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKE-SPLKMR 229
+R+ L + ++++ + D+GNYTC K ++ T L+V E SP +
Sbjct: 1123QRMGGIKLRHQQWSLVMESAVPSDRGNYTC----VVQNKYGSIKHTYQLDVLERSPHRPI 1290
Query: 230 PEFIYPNNNTIEVELGSHVVMECNVSS 256
+ P N T+ V GS V C V S
Sbjct: 1291LQAGLPANQTVVV--GSDVEFHCKVYS 1365
>emb|Z81144.1|HSU129B7 Human DNA sequence from cosmid U129B7, between markers DXS366 and DXS87
on chromosome X contains EST
Length = 22388
Score = 51.6 bits (122), Expect = 2e-04
Identities = 23/75 (30%), Positives = 43/75 (56%)
Frame = +2
Query: 95 LYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDED 154
L+ C R+ + ++L V +N++GLC+N ++Y + + +I CPD+++FK D
Sbjct: 11867 LFLCSYRNSTYCMKVSMSLTVAENESGLCYNSRIRYLEKSEVTKRKEISCPDMDDFKKSD 12046
Query: 155 NINPEIHWYKECKSG 169
P++ WYK + G
Sbjct: 12047 Q-EPDVVWYKVTQHG 12088
>gb|M35195.1|CHKCEK2 Chicken tyrosine kinase (cek2) mRNA, complete cds
Length = 3694
Score = 51.2 bits (121), Expect = 3e-04
Identities = 62/228 (27%), Positives = 95/228 (41%), Gaps = 24/228 (10%)
Frame = +1
Query: 53 SDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIIN 112
S ++ W+++G + I R I Q+ LL I + +DSGLY C+ R S + + N
Sbjct: 346 SSVSVFWFKDG--IGIAPSNRTHIGQK--LLKIINVSYDDSGLYSCKPR---HSNEVLGN 504
Query: 113 LKVFKNDNGLCFNGEMKYDQ--------------------IVKSANAGKIICPDLENFKD 152
V D+ + E D+ V +AN + CP
Sbjct: 505 FTVRVTDSPSSGDDEDDDDESEDTGVPFWTRPDKMEKKLLAVPAANTVRFRCP------A 666
Query: 153 EDNINPEIHWYKECKSGFLEDKR---LVLAEGENAILILNVTIQDKGNYTCRMVYTYMGK 209
N P I+W K K F + R + L + ++++ +V D+GNYTC K
Sbjct: 667 GGNPTPTIYWLKNGKE-FKGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC----VVENK 831
Query: 210 QYNVSRTMNLEVKE-SPLKMRPEFIYPNNNTIEVELGSHVVMECNVSS 256
N+ T L+V E SP + + P N T+ V GS+V C V S
Sbjct: 832 YGNIRHTYQLDVLERSPHRPILQAGLPANQTVVV--GSNVEFHCKVYS 969
>ref|NM_058889.1| immunoglobin-like protein
Length = 19929
Score = 50.8 bits (120), Expect = 3e-04
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 8/226 (3%)
Frame = +1
Query: 56 NLTWYRNGSNMPITTERRARIHQRKG--LLWFIPAALEDSGLYECEVRSLNRSKQKIINL 113
N+ W+++ + I + G L A ED G+Y C+ + + N+
Sbjct: 10564 NVEWFKDDKPINIDNSHIFAKDEGSGHHTLTIKQARGEDVGVYTCKATNEAGEAKTTANM 10743
Query: 114 KVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLED 173
V + F +K ++ + A ++ + E PE+ W+K+ +++
Sbjct: 10744 AVQEEIEAPLFVQGLKPYEVEQGKPAELVV-------RVEGKPEPEVKWFKDGVPIAIDN 10902
Query: 174 KRLVLAEGEN---AILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEV---KESPLK 227
+ ++ +GEN ++I + D G YTC+ GK V + K++ +
Sbjct: 10903 QHVIEKKGENGSHTLVIKDTNNADFGKYTCQAT-NKAGKDETVGELKIPKYSFEKQTAEE 11079
Query: 228 MRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVD 273
++P FI P T VE G VV+EC V+ + + +++ ND+ V+
Sbjct: 11080 VKPLFIEPLKETFAVE-GDTVVLECKVNKESHPQIKFFK-NDQPVE 11211
>gb|AF003131.1| Caenorhabditis elegans cosmid C09D1, complete sequence
Length = 53848
Score = 50.8 bits (120), Expect = 3e-04
Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 8/226 (3%)
Frame = +1
Query: 56 NLTWYRNGSNMPITTERRARIHQRKG--LLWFIPAALEDSGLYECEVRSLNRSKQKIINL 113
N+ W+++ + I + G L A ED G+Y C+ + + N+
Sbjct: 38908 NVEWFKDDKPINIDNSHIFAKDEGSGHHTLTIKQARGEDVGVYTCKATNEAGEAKTTANM 39087
Query: 114 KVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLED 173
V + F +K ++ + A ++ + E PE+ W+K+ +++
Sbjct: 39088 AVQEEIEAPLFVQGLKPYEVEQGKPAELVV-------RVEGKPEPEVKWFKDGVPIAIDN 39246
Query: 174 KRLVLAEGEN---AILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEV---KESPLK 227
+ ++ +GEN ++I + D G YTC+ GK V + K++ +
Sbjct: 39247 QHVIEKKGENGSHTLVIKDTNNADFGKYTCQAT-NKAGKDETVGELKIPKYSFEKQTAEE 39423
Query: 228 MRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVD 273
++P FI P T VE G VV+EC V+ + + +++ ND+ V+
Sbjct: 39424 VKPLFIEPLKETFAVE-GDTVVLECKVNKESHPQIKFFK-NDQPVE 39555
>gb|U33058.1|CEU33058 Caenorhabditis elegans UNC-89 (unc-89) gene, complete cds
Length = 46638
Score = 50.8 bits (120), Expect = 3e-04
Identities = 51/228 (22%), Positives = 101/228 (43%), Gaps = 10/228 (4%)
Frame = +2
Query: 56 NLTWYRNGSNMPITTERRARIHQRKG----LLWFIPAALEDSGLYECEVRSLNRSKQKII 111
N+ W+++ + PI + + +G L A ED G+Y C+ + +
Sbjct: 32999 NVEWFKD--DKPINIDNSHIFGKDEGSGHHTLTIKQARGEDVGVYTCKATNEAGEAKTTA 33172
Query: 112 NLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFL 171
N+ V + F +K ++ + A ++ + E PE+ W+K+ +
Sbjct: 33173 NMAVQEEIEAPLFVQGLKPYEVEQGKPAELVV-------RVEGKPEPEVKWFKDGVPIAI 33331
Query: 172 EDKRLVLAEGEN---AILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEV---KESP 225
+++ ++ +GEN ++I + D G YTC+ GK V + K++
Sbjct: 33332 DNQHVIEKKGENGSHTLVIKDTNNADFGKYTCQAT-NKAGKDETVGELKIPKYSFEKQTA 33508
Query: 226 LKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVD 273
+++P FI P T VE G VV+EC V+ + + +++ ND+ V+
Sbjct: 33509 EEVKPLFIEPLKETFAVE-GDTVVLECKVNKESHPQIKFFK-NDQPVE 33646
>emb|AJ309935.1|GGA309935 Gallus gallus mRNA for FAR-2 protein
Length = 4233
Score = 50.8 bits (120), Expect = 3e-04
Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 1/216 (0%)
Frame = +3
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W +NG +P+ + +RI +L + D+G+Y+C + + LK+ +
Sbjct: 1401 WLKNG--VPLWPQ--SRIEMINSVLMIRTVNISDAGMYQCLAENKYGTIYASAELKILAS 1568
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
N +M+ I+ I C K + + P I W K K+ L + + V
Sbjct: 1569 APTFPLN-QMRKTIIITKGQEVVIEC------KPQASPKPTITWKKGDKA--LRESKRVT 1721
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN 238
+ ++ ILN + D+G Y+CR V + + S + VKE P I
Sbjct: 1722 ILPQGSLRILNASKSDEGRYSCRGVNVFGSAEIVAS----VSVKE------PTRIELTPK 1871
Query: 239 TIEVELGSHVVMECN-VSSGVYGLLPYWQVNDEDVD 273
IE+ +G +V+ C + + YW +N + +D
Sbjct: 1872 KIELTVGESIVLSCKALHDSTLDVTFYWTLNGQPID 1979
>dbj|AK057278.1|AK057278 Homo sapiens cDNA FLJ32716 fis, clone TESTI2000808, highly similar
to Rattus norvegicus neural cell adhesion protein BIG-2
precursor (BIG-2) mRNA
Length = 2300
Score = 50.4 bits (119), Expect = 4e-04
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 3/200 (1%)
Frame = +3
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKII--NLKVF 116
W +NG P+ T R +I Q G L L D+G+Y+C L +K +I N ++
Sbjct: 129 WLKNGE--PLLTRDRIQIEQ--GTLNITIVNLSDAGMYQC----LAENKHGVIFSNAELS 284
Query: 117 KNDNGLCFNGEM-KYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKR 175
G F+ + K +VK I C K + + P W K+ + E++R
Sbjct: 285 VIAVGPDFSRTLLKRVTLVKVGGEVVIEC------KPKASPKPVYTW-KKGRDILKENER 443
Query: 176 LVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYP 235
+ ++E N + I+NVT D G+YTC + + G S T NL VK+ M P
Sbjct: 444 ITISEDGN-LRIINVTKSDAGSYTC-IATNHFG---TASSTGNLVVKDPTRVMVPP---- 596
Query: 236 NNNTIEVELGSHVVMECNVS 255
++++V +G +V+ C V+
Sbjct: 597 --SSMDVTVGESIVLPCQVT 650
>gb|S78201.1|S78201 Sheeppox virus strain KS-1 Q2/1L (Q2/1L) gene, partial cds; and
Q2/2L (Q2/2L) and Q2/3L (Q2/3L) genes, complete cds
Length = 2910
Score = 50.4 bits (119), Expect = 4e-04
Identities = 63/300 (21%), Positives = 121/300 (40%), Gaps = 24/300 (8%)
Frame = +2
Query: 41 ISCPVITLPMLHSDYNLTWYRNGSNMPITT----------ERRARIHQRKGLLWFIPAAL 90
+ CP + L+ + + W+ N + T + R++ LW
Sbjct: 56 VKCPYVDT--LNYNTTVKWFLVNYNKYVKTGDVKKSFHEFKNTDRVYSVGHSLWINNITK 229
Query: 91 EDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENF 150
DSG+Y C V + + L V+K + + ++ +++C + +NF
Sbjct: 230 NDSGIYACNVHNSTYYFTSSVMLDVYKKET---------INSVI--GTNYELLCINTKNF 376
Query: 151 KDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMV------- 203
+ N + E++W+K+ + + + + +LI N++ D+G Y C +
Sbjct: 377 INTFNCSYEVNWFKDREK---INNNFKYKKSKEKLLIRNISKSDEGVYLCSITTDTRCNP 547
Query: 204 YTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSS----GVY 259
K+Y + + K+ + + F+ N+TI LG + +MEC S VY
Sbjct: 548 KNLALKRYYHNNVIKKRFKDD-INLTVNFL---NSTI--ALGKNFLMECIGESKNIQRVY 709
Query: 260 GLLPYWQVNDEDVDSFD---STYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCH 316
G +W +N +V +D + Y + G + IA+ I EVK K + F C+
Sbjct: 710 GSSIFWLINGVNVLDYDRSKNIYLGREMYVGNSYKIALI-----IKEVKRKYLSANFTCN 874
>ref|XM_087430.1| Homo sapiens similar to axonal-associated cell adhesion molecule
(LOC152330), mRNA
Length = 2763
Score = 50.4 bits (119), Expect = 4e-04
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 3/200 (1%)
Frame = +1
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKII--NLKVF 116
W +NG P+ T R +I Q G L L D+G+Y+C L +K +I N ++
Sbjct: 592 WLKNGE--PLLTRDRIQIEQ--GTLNITIVNLSDAGMYQC----LAENKHGVIFSNAELS 747
Query: 117 KNDNGLCFNGEM-KYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKR 175
G F+ + K +VK I C K + + P W K+ + E++R
Sbjct: 748 VIAVGPDFSRTLLKRVTLVKVGGEVVIEC------KPKASPKPVYTW-KKGRDILKENER 906
Query: 176 LVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYP 235
+ ++E N + I+NVT D G+YTC + + G S T NL VK+ M P
Sbjct: 907 ITISEDGN-LRIINVTKSDAGSYTC-IATNHFG---TASSTGNLVVKDPTRVMVPP---- 1059
Query: 236 NNNTIEVELGSHVVMECNVS 255
++++V +G +V+ C V+
Sbjct: 1060--SSMDVTVGESIVLPCQVT 1113
>emb|X60184.1|MMST2G Mouse ST2 gene for growth-associated protein
Length = 9169
Score = 50.1 bits (118), Expect = 6e-04
Identities = 29/81 (35%), Positives = 41/81 (49%), Gaps = 8/81 (9%)
Frame = +3
Query: 29 CNYFVLVG--------EPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRK 80
C+Y LVG E + CP S Y + WY + +N I T++R RI +
Sbjct: 2391 CSYL*LVGKSSWGLENEALIVRCP----QRGRSTYPVEWYYSDTNESIPTQKRNRIFVSR 2558
Query: 81 GLLWFIPAALEDSGLYECEVR 101
L F+PA +EDSG+Y C +R
Sbjct: 2559 DRLKFLPARVEDSGIYACVIR 2621
>ref|NM_021805.1| Homo sapiens single Ig IL-1R-related molecule (SIGIRR), mRNA
Length = 1695
Score = 49.7 bits (117), Expect = 7e-04
Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 21/248 (8%)
Frame = +2
Query: 230 PEFIYPNNNTI-EVELGSHVVMECN--VSSGVYGLLPYWQVNDEDVDSFDSTYREQFYEE 286
P+F+ P+ + + LGS V + C V SG + LP Q+ ++
Sbjct: 251 PDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLP----------------SVQWLKD 382
Query: 287 GMPHGIA-------VSGTKFNISEVKLKDY------AYKFFCHFIYDSQEFT-SYIKLEH 332
G+P GI S K N+SEV + + + + F Q + S L+
Sbjct: 383 GLPLGIGGHYSLHEYSWVKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNISFSSFTLQR 562
Query: 333 PVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYV 392
+Y +++++LWY+ + + +++DGK+YDAYV
Sbjct: 563 AGPTSHVAAVLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEV---EINDGKLYDAYV 733
Query: 393 LY---PKNRESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDL-AGEAVIDVTDEKIHQ 448
Y P++R+ F IL LER+ GY LF+ R+ L E D+ + +
Sbjct: 734 SYSDCPEDRK--------FVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLL-VNLSR 886
Query: 449 SRRVIIIL 456
RR+I++L
Sbjct: 887 CRRLIVVL 910
>dbj|AK025099.1|AK025099 Homo sapiens cDNA: FLJ21446 fis, clone COL04458
Length = 1695
Score = 49.7 bits (117), Expect = 7e-04
Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 21/248 (8%)
Frame = +2
Query: 230 PEFIYPNNNTI-EVELGSHVVMECN--VSSGVYGLLPYWQVNDEDVDSFDSTYREQFYEE 286
P+F+ P+ + + LGS V + C V SG + LP Q+ ++
Sbjct: 251 PDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLP----------------SVQWLKD 382
Query: 287 GMPHGIA-------VSGTKFNISEVKLKDY------AYKFFCHFIYDSQEFT-SYIKLEH 332
G+P GI S K N+SEV + + + + F Q + S L+
Sbjct: 383 GLPLGIGGHYSLHEYSWVKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNISFSSFTLQR 562
Query: 333 PVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYV 392
+Y +++++LWY+ + + +++DGK+YDAYV
Sbjct: 563 AGPTSHVAAVLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEV---EINDGKLYDAYV 733
Query: 393 LY---PKNRESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDL-AGEAVIDVTDEKIHQ 448
Y P++R+ F IL LER+ GY LF+ R+ L E D+ + +
Sbjct: 734 SYSDCPEDRK--------FVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLL-VNLSR 886
Query: 449 SRRVIIIL 456
RR+I++L
Sbjct: 887 CRRLIVVL 910
>gb|BC003591.1|BC003591 Homo sapiens, single Ig IL-1R-related molecule, clone MGC:4338
IMAGE:2821373, mRNA, complete cds
Length = 1627
Score = 49.7 bits (117), Expect = 7e-04
Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 21/248 (8%)
Frame = +1
Query: 230 PEFIYPNNNTI-EVELGSHVVMECN--VSSGVYGLLPYWQVNDEDVDSFDSTYREQFYEE 286
P+F+ P+ + + LGS V + C V SG + LP Q+ ++
Sbjct: 181 PDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLP----------------SVQWLKD 312
Query: 287 GMPHGIA-------VSGTKFNISEVKLKDY------AYKFFCHFIYDSQEFT-SYIKLEH 332
G+P GI S K N+SEV + + + + F Q + S L+
Sbjct: 313 GLPLGIGGHYSLHEYSWVKANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNISFSSFTLQR 492
Query: 333 PVQNXXXXXXXXXXXXXXXXXXXXXVYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYV 392
+Y +++++LWY+ + + +++DGK+YDAYV
Sbjct: 493 AGPTSHVAAVLASLLVLLALLLAALLYVKCRLNVLLWYQDAYGEV---EINDGKLYDAYV 663
Query: 393 LY---PKNRESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDL-AGEAVIDVTDEKIHQ 448
Y P++R+ F IL LER+ GY LF+ R+ L E D+ + +
Sbjct: 664 SYSDCPEDRK--------FVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLL-VNLSR 816
Query: 449 SRRVIIIL 456
RR+I++L
Sbjct: 817 CRRLIVVL 840
>gb|AC087076.1|AC087076 Caenorhabditis briggsae cosmid CB032N22, complete sequence
Length = 83495
Score = 49.3 bits (116), Expect = 0.001
Identities = 55/231 (23%), Positives = 105/231 (44%), Gaps = 13/231 (5%)
Frame = -1
Query: 56 NLTWYRNGSNMPITTERRARIHQRKG----LLWFIPAALEDSGLYECEVRSLNRSKQKII 111
N+ W+++ + PI + + +G L A ED G+Y C+ + +
Sbjct: 2348 NVEWFKD--DKPINIDNAHIFAKDEGSGHHTLTIKQARGEDVGVYTCKATNEAGEAKTTA 2175
Query: 112 NLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFL 171
N+ V + F +K ++ + GK + +LE + E PE+ W+K+ +
Sbjct: 2174 NMAVQEEIEAPLFVQGLKPYEVEQ----GKPV--ELE-VRVEGKPEPEVKWFKDGAPIAI 2016
Query: 172 EDKRLVLAEGEN---AILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEV------K 222
++K ++ +GEN ++I + D G YTC+ GK + L+V K
Sbjct: 2015 DNKHVIEKKGENGSHTLIIKDTNSADFGKYTCQAT-NKAGKDETIG---ELKVPKYSFEK 1848
Query: 223 ESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVD 273
++ +++P FI P T E G VV+EC V+ + + +++ ND+ V+
Sbjct: 1847 QTAEEVKPLFIEPLKETFANE-GDTVVLECKVNKDSHPQIKFFK-NDQPVE 1701
>emb|X90569.1|HSTITINN2 H.sapiens mRNA for titin protein (clone hsk1-hsk19)
Length = 23887
Score = 49.3 bits (116), Expect = 0.001
Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 1/170 (0%)
Frame = +1
Query: 33 VLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALED 92
V G+P + V P L WY++G + + + R L F A L D
Sbjct: 2077 VTAGDPATLEYTVAGTPELKPK----WYKDGRPLVASKKYRISFKNNVAQLKFYSAELHD 2244
Query: 93 SGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKD 152
SG Y E+ + S V D F ++ V + ++ C K
Sbjct: 2245 SGQYTFEISNEVGSSSCETTFTVLDRDIAPFFTKPLRNVDSVVNGTC-RLDC------KI 2403
Query: 153 EDNINPEIHWYKECKSGFLEDK-RLVLAEGENAILILNVTIQDKGNYTCR 201
++ + W+K+ K D+ R+ EG ++ I+ V + D GN+TCR
Sbjct: 2404 AGSLPMRVSWFKDGKEIAASDRYRIAFVEGTASLEIIRVDMNDAGNFTCR 2553
Score = 37.4 bits (85), Expect = 3.8
Identities = 63/250 (25%), Positives = 102/250 (40%), Gaps = 6/250 (2%)
Frame = +1
Query: 36 GEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWF--IPAALEDS 93
G+ T C + P + ++WY +G+ IT ++ I GL F A +E+S
Sbjct: 4621 GQSTTFECQITGTPKIR----VSWYLDGNE--ITAIQKHGISFIDGLATFQISGARVENS 4782
Query: 94 GLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDE 153
G Y CE R+ + I LKV + F E+K ++VK + D+E +
Sbjct: 4783 GTYVCEARNDAGTASCSIELKVKEPPT---FIRELKPVEVVKYS--------DVELECEV 4929
Query: 154 DNINP-EIHWYKECKSGFLEDKRLVLAEGENAILILNVT---IQDKGNYTCRMVYTYMGK 209
P E+ W K + K+ L + ++ L++T D G Y C + + G
Sbjct: 4930 TGTPPFEVTWLKNNRE-IRSSKKYTLTD-RVSVFNLHITKCDPSDTGEYQC--IVSNEGG 5097
Query: 210 QYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVND 269
+ S + LK P FI NT V L S + V +G + W +D
Sbjct: 5098 SCSCSTRV-------ALKEPPSFIKKIENTTTV-LKSSATFQSTV-AGSPPISITWLKDD 5250
Query: 270 EDVDSFDSTY 279
+ +D D+ Y
Sbjct: 5251 QILDEDDNVY 5280
Score = 37.4 bits (85), Expect = 3.8
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 9/176 (5%)
Frame = +1
Query: 36 GEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGL 95
G+ T ++C V P + +TW+ N + +++ R + +L +EDSG
Sbjct: 2935 GDATQLACKVTGTPPI----KITWFANDREIKESSKHRMSFVESTAVLRLTDVGIEDSGE 3102
Query: 96 YECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDN 155
Y CE ++ ++ + K F E K +++K D+ +
Sbjct: 3103 YMCEAQN-EAGSDHCSSIVIVKESP--YFTKEFKPIEVLKEY--------DVMLLAEVAG 3249
Query: 156 INP-EIHWYKE---CKSG-----FLEDKRLVLAEGENAILILNVTIQDKGNYTCRM 202
P EI W+K+ +SG F++D + ++ IL D G Y CR+
Sbjct: 3250 TPPFEITWFKDNTILRSGRKYKTFIQDHLV-------SLQILKFVAADAGEYQCRV 3396
>ref|NM_053879.1| Rattus norvegicus axonal-associated cell adhesion molecule (Axcam),
mRNA
Length = 4609
Score = 49.3 bits (116), Expect = 0.001
Identities = 52/197 (26%), Positives = 85/197 (42%)
Frame = +2
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W +NG P+ T R +I Q G L L D+G+Y+C + + L V
Sbjct: 1463 WLKNGD--PLLTRERIQIEQ--GTLNITIVNLSDAGMYQCVAENKHGVIYASAELSVIAE 1630
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
+K +VK I C K + + P W K + E++R+ +
Sbjct: 1631 SPDFS-RTLLKRVTLVKVGGEVVIEC------KPKASPRPVYTWRKG-REILRENERITI 1786
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN 238
+E N + I+NVT D G+YTC + + G S T N+ VK+ M P +
Sbjct: 1787 SEDGN-LRIINVTKSDAGSYTC-IATNHFG---TASSTGNVVVKDPTKVMVPP------S 1933
Query: 239 TIEVELGSHVVMECNVS 255
+++V +G +V+ C V+
Sbjct: 1934 SMDVTVGESIVLPCQVT 1984
>gb|U35371.1|RNU35371 Rattus norvegicus neural cell adhesion protein BIG-2 precursor
(BIG-2) mRNA, complete cds
Length = 4609
Score = 49.3 bits (116), Expect = 0.001
Identities = 52/197 (26%), Positives = 85/197 (42%)
Frame = +2
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W +NG P+ T R +I Q G L L D+G+Y+C + + L V
Sbjct: 1463 WLKNGD--PLLTRERIQIEQ--GTLNITIVNLSDAGMYQCVAENKHGVIYASAELSVIAE 1630
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
+K +VK I C K + + P W K + E++R+ +
Sbjct: 1631 SPDFS-RTLLKRVTLVKVGGEVVIEC------KPKASPRPVYTWRKG-REILRENERITI 1786
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN 238
+E N + I+NVT D G+YTC + + G S T N+ VK+ M P +
Sbjct: 1787 SEDGN-LRIINVTKSDAGSYTC-IATNHFG---TASSTGNVVVKDPTKVMVPP------S 1933
Query: 239 TIEVELGSHVVMECNVS 255
+++V +G +V+ C V+
Sbjct: 1934 SMDVTVGESIVLPCQVT 1984
>emb|X63101.1|GDAXONIN G.domesticus mRNA for axonin-1
Length = 3967
Score = 48.9 bits (115), Expect = 0.001
Identities = 51/234 (21%), Positives = 101/234 (42%), Gaps = 4/234 (1%)
Frame = +1
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W R+G P+ ++ R + G L F LEDSG+Y+C + + + L V
Sbjct: 1195 WLRDGQ--PLASQNRIEVSG--GELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQAL 1362
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
N +++ +A +GK+I P + + W K + L + V
Sbjct: 1363 APDFRLN---PVKRLIPAARSGKVIIP----CQPRAAPKATVLWTKGTE--LLTNSSRVT 1515
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKE-SPLKMRPEFIYPNN 237
+ +++ N++ D+G YTC +MGK + T L V++ + + + P
Sbjct: 1516 ITADGTLILQNISKSDEGKYTC-FAENFMGK---ANSTGILSVRDATKITLAP------- 1662
Query: 238 NTIEVELGSHVVMECNVS-SGVYGLLPYWQVND--EDVDSFDSTYREQFYEEGM 288
++ ++ +G ++ ++C+ S L W ++D D+D + YR +E +
Sbjct: 1663 SSADINVGENLTLQCHASHDPTMDLTFTWSLDDFPIDLDKSEGHYRRASVKEAV 1824
>emb|Y14852.1|OCY14852 Oryctolagus cuniculus mRNA for tintin (N2A)
Length = 18848
Score = 48.5 bits (114), Expect = 0.002
Identities = 42/170 (24%), Positives = 66/170 (38%), Gaps = 1/170 (0%)
Frame = +1
Query: 33 VLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALED 92
V G+P + V P L WY++G + + + R L F A L D
Sbjct: 2908 VTAGDPATLEYTVSGTPELKPK----WYKDGRPLVASKKYRLSFKNNVAQLKFYSAELHD 3075
Query: 93 SGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKD 152
SG Y E+ + S V D F ++ V S ++ C K
Sbjct: 3076 SGQYTFEISNEVGSSSCETTFTVLDRDIAPFFTKPLRNVDSVVSGTC-RLDC------KI 3234
Query: 153 EDNINPEIHWYKECKSGFLEDK-RLVLAEGENAILILNVTIQDKGNYTCR 201
++ + W+K+ K D+ R+ EG ++ I V + D GN+TCR
Sbjct: 3235 AGSLPMRVSWFKDGKEIAASDRYRIAFVEGTASLEISRVDMNDAGNFTCR 3384
Score = 41.6 bits (96), Expect = 0.20
Identities = 43/179 (24%), Positives = 67/179 (37%), Gaps = 10/179 (5%)
Frame = +1
Query: 33 VLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALED 92
V G+ + C + P + +TWYRN +P + + R ++ ED
Sbjct: 7129 VKAGDSARLECKITGSP----EIRVTWYRNEHELPASDKYRMTFXDSVAVIQMNNLGTED 7296
Query: 93 SGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKD 152
SG + CE + N + + KV IVK P +E K+
Sbjct: 7297 SGDFICEAQ--NPAGSTSSSTKV-----------------IVKEPPVFSSFPPVVETLKN 7419
Query: 153 EDNINP---------EIHWYKECKSGFLEDKRLVLAEGENA-ILILNVTIQDKGNYTCR 201
+ I E+ WYK+ + K + ++ NA I ILNV D G Y C+
Sbjct: 7420 SEVILECELSGTPPFEVVWYKDKRQLRSSKKYKIASKNFNASIHILNVDSSDIGEYHCK 7596
Score = 38.5 bits (88), Expect = 1.7
Identities = 41/200 (20%), Positives = 83/200 (41%), Gaps = 1/200 (0%)
Frame = +1
Query: 57 LTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVF 116
+TW ++G +P + + + L A L+DSG Y C + S ++ V
Sbjct: 1849 VTWNKDGQKLPPGKDYKIYFEDKIASLEIPLAKLKDSGTYVCTASNEAGSSSSSTSVTVR 2028
Query: 117 KNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKS-GFLEDKR 175
+ + F ++ ++ + ++ C K + + ++ W+K K R
Sbjct: 2029 EPPS---FVKKVDPSYLMLPGESARLHC------KLKGSPVIQVTWFKNNKELSESNTVR 2181
Query: 176 LVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYP 235
+ E + I +V ++D GNY+C V +G S + + +KE P +R
Sbjct: 2182 MSFVHSEAILDITDVKVEDSGNYSCEAV-NDVGSD---SCSTEIVIKEPPSFIR------ 2331
Query: 236 NNNTIEVELGSHVVMECNVS 255
+V G++ +++C VS
Sbjct: 2332 TLEPTDVVRGANALLQCEVS 2391
Score = 38.1 bits (87), Expect = 2.2
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 9/176 (5%)
Frame = +1
Query: 36 GEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGL 95
G+ T ++C V P + +TW+ N + +++ + + +L A+EDSG
Sbjct: 3766 GDATQLACKVTGSPPI----KITWFANDRELKESSKHKMSFVESTAILRLTDIAIEDSGE 3933
Query: 96 YECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDN 155
Y CE ++ ++ + K F E K +++K D+ +
Sbjct: 3934 YMCEAQN-EAGSDHCSSIVIVKESP--YFTKEFKPVEVLKEY--------DVMLLAEVAG 4080
Query: 156 INP-EIHWYKE---CKSG-----FLEDKRLVLAEGENAILILNVTIQDKGNYTCRM 202
P EI W+K+ +SG F++D+ + ++ IL D G Y CR+
Sbjct: 4081 TPPFEITWFKDNTILRSGRKYKTFIQDQLV-------SLQILKFVAVDAGEYQCRV 4227
Score = 36.6 bits (83), Expect = 6.5
Identities = 50/227 (22%), Positives = 93/227 (40%), Gaps = 7/227 (3%)
Frame = +1
Query: 35 VGEPTAISCPVI-TLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDS 93
+GE C V T P+ +TW ++ + + + + L + D+
Sbjct: 12499 LGESGTFKCHVTGTAPI-----KITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDA 12663
Query: 94 GLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDE 153
G Y C + V D+ G + + +K +I+ D E+ + E
Sbjct: 12664 GQYTCYASN------------VAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQD-EHTRYE 12804
Query: 154 DNI--NPEIH--WYKECKSGFLEDK-RLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
I +PEI WYK+ K R+ E + + N++++D G+YTC + G
Sbjct: 12805 CKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCE-AHNAAG 12981
Query: 209 KQYNVSRTMNLEVKESPL-KMRPEFIYPNNNTIEVELGSHVVMECNV 254
+ S + +L+VKE P+ + +P + +E G+ V +EC +
Sbjct: 12982 ---SASSSTSLKVKEPPVFRKKP-------HPVETLKGADVHLECEL 13092
Score = 36.2 bits (82), Expect = 8.5
Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 2/182 (1%)
Frame = +1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
+Y +L GE + C + P++ +TW++N + + R + +L
Sbjct: 2062 SYLMLPGESARLHCKLKGSPVIQ----VTWFKNNKELSESNTVRMSFVHSEAILDITDVK 2229
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLEN 149
+EDSG Y CE + S + + + + F ++ +V+ ANA + C
Sbjct: 2230 VEDSGNYSCEAVNDVGSDSCSTEIVIKEPPS---FIRTLEPTDVVRGANA-LLQC----- 2382
Query: 150 FKDEDNINP-EIHWYKECKSGFLEDK-RLVLAEGENAILILNVTIQDKGNYTCRMVYTYM 207
+ P EI W+K K K RL + ++ I + D G Y C +V +
Sbjct: 2383 --EVSGTGPFEISWFKNKKQIRSSKKYRLFSQKSLVSLEIFSFNSADVGEYEC-VVANEV 2553
Query: 208 GK 209
GK
Sbjct: 2554 GK 2559
>ref|XM_080991.1| off-track, mRNA
Length = 4638
Score = 48.5 bits (114), Expect = 0.002
Identities = 57/241 (23%), Positives = 96/241 (39%), Gaps = 24/241 (9%)
Frame = +2
Query: 36 GEPTAISCPVITLP--MLHSDYNLTWYRNGS---------NMPIT-------------TE 71
GEPTA++C + LP + + L W ++G + PI +
Sbjct: 1700 GEPTALTC-LYELPDELKNQRIQLRWRKDGKLLRQVELGGSAPIPGHSFDSGKDALLRED 1876
Query: 72 RRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYD 131
R +H++ G L F D+G Y+C+++ L + + + L F +
Sbjct: 1877 ARLVLHKQNGTLSFASIIASDAGQYQCQLQ-LEAHAPINSSPGILEVIEQLKFVPQPTSK 2053
Query: 132 QIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVT 191
+ A K+ C K + P++ W ++ ++ L D V A G ++ NV
Sbjct: 2054 NLELDAVVAKVHC------KAQGTPTPQVQWVRDGENTTLPDHVEVDANG--TLIFRNVN 2209
Query: 192 IQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVME 251
+ +GNYTC + T Q N + +N+ V P+F P IE VVM
Sbjct: 2210 SEHRGNYTC--LATNSQGQINATVAINVVV-------TPKFSVPPVGPIETSEQGTVVMH 2362
Query: 252 C 252
C
Sbjct: 2363 C 2365
>ref|NM_011248.1| Mus musculus retinoblastoma inhibiting gene 1 (Rbig1), mRNA
Length = 5259
Score = 48.1 bits (113), Expect = 0.002
Identities = 66/284 (23%), Positives = 115/284 (40%), Gaps = 2/284 (0%)
Frame = +2
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N V VGEP + C P H + +TW + + E RI R G L
Sbjct: 680 NVVVAVGEPAVMEC---VPPKGHPEPLVTWKKGKIKLK---EEEGRITIRGGKLMMSHTF 841
Query: 90 LEDSGLYECEVRSLNRSKQK-IINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
D+G+Y C ++ ++ L V + + L +Q+V + +C
Sbjct: 842 KSDAGMYMCVASNMAGERESGAAELVVLERPSFL----RRPINQVVLADAPVNFLC---- 997
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
+ + + P +HW K+ G L R + ++++ I V+ +D+G YTC + +G
Sbjct: 998 --EVQGDPQPNLHWRKD--DGELPAGRYEI-RSDHSLWIDQVSSEDEGTYTC-VAENSVG 1159
Query: 209 KQYNVSRTMNLEVKESPLKMRPEFI-YPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQV 267
+ S ++++ V P+F+ P N T V G++V +C + +WQ
Sbjct: 1160RA-EASGSLSVHVP-------PQFVTKPQNQT--VAPGANVSFQCETKGNPPPAI-FWQK 1306
Query: 268 NDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAY 311
V F S + M + + NI+EVK+ D Y
Sbjct: 1307EGSQVLLFPSQSLQP-----MGRLLVSPRGQLNITEVKIGDGGY 1423
>gb|AF060570.1|AF060570 Mus musculus rig-1 protein mRNA, complete cds
Length = 5259
Score = 48.1 bits (113), Expect = 0.002
Identities = 66/284 (23%), Positives = 115/284 (40%), Gaps = 2/284 (0%)
Frame = +2
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N V VGEP + C P H + +TW + + E RI R G L
Sbjct: 680 NVVVAVGEPAVMEC---VPPKGHPEPLVTWKKGKIKLK---EEEGRITIRGGKLMMSHTF 841
Query: 90 LEDSGLYECEVRSLNRSKQK-IINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
D+G+Y C ++ ++ L V + + L +Q+V + +C
Sbjct: 842 KSDAGMYMCVASNMAGERESGAAELVVLERPSFL----RRPINQVVLADAPVNFLC---- 997
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
+ + + P +HW K+ G L R + ++++ I V+ +D+G YTC + +G
Sbjct: 998 --EVQGDPQPNLHWRKD--DGELPAGRYEI-RSDHSLWIDQVSSEDEGTYTC-VAENSVG 1159
Query: 209 KQYNVSRTMNLEVKESPLKMRPEFI-YPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQV 267
+ S ++++ V P+F+ P N T V G++V +C + +WQ
Sbjct: 1160RA-EASGSLSVHVP-------PQFVTKPQNQT--VAPGANVSFQCETKGNPPPAI-FWQK 1306
Query: 268 NDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAY 311
V F S + M + + NI+EVK+ D Y
Sbjct: 1307EGSQVLLFPSQSLQP-----MGRLLVSPRGQLNITEVKIGDGGY 1423
>emb|X75603.1|PWFGFR3 P.waltlii mRNA for fibroblast growth factor receptor 3
Length = 2763
Score = 47.8 bits (112), Expect = 0.003
Identities = 62/240 (25%), Positives = 102/240 (41%), Gaps = 19/240 (7%)
Frame = +1
Query: 36 GEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGL 95
G+ +SC T P S ++ W+++G I+ + H + LL I + +DSG+
Sbjct: 148 GDTIELSC---TTP--GSSVSVVWFKDG----ISVDPPTWSHTGQKLLKIINVSYDDSGV 300
Query: 96 YECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFK---- 151
Y C+ R +S + + N+ V D+ + E D+ +SANA K P+ K
Sbjct: 301 YSCKAR---QSSEVLRNVTVRVTDSPSSGDDE-DDDEESESANAPKFTRPEWMEKKLLAV 468
Query: 152 -----------DEDNINPEIHWYKECKSGFLEDKR---LVLAEGENAILILNVTIQDKGN 197
P I W K K F + R + L + ++++ +V D+GN
Sbjct: 469 PAANTVRFRCPAAGKPTPSITWLKNGKE-FKGEHRIGGIKLRHQQWSLVMESVVPSDRGN 645
Query: 198 YTCRMVYTYMGKQYNVSRTMNLEVKE-SPLKMRPEFIYPNNNTIEVELGSHVVMECNVSS 256
YTC K + T L+V E +P + + + +N T+ V GS V C V S
Sbjct: 646 YTC----VVANKYGTIRETYTLDVLERTPHRPILQAGFRSNKTVVV--GSDVEFHCKVYS 807
>ref|NM_078981.1| Drosophila melanogaster off-track (otk), mRNA
Length = 4640
Score = 47.4 bits (111), Expect = 0.004
Identities = 45/193 (23%), Positives = 80/193 (41%)
Frame = +2
Query: 60 YRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKND 119
+ +G + + + R +H++ G L F D+G Y+C+++ L + + +
Sbjct: 1829 FDSGKDALLREDARLVLHKQNGTLSFASIIASDAGQYQCQLQ-LEAHAPINSSPGILEVI 2005
Query: 120 NGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLA 179
L F + + A K+ C K + P++ W ++ ++ L D V A
Sbjct: 2006 EQLKFVPQPTSKNLELDAVVAKVHC------KAQGTPTPQVQWVRDGENTTLPDHVEVDA 2167
Query: 180 EGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNT 239
G ++ NV + +GNYTC + T Q N + +N+ V P+F P
Sbjct: 2168 NG--TLIFRNVNSEHRGNYTC--LATNSQGQINATVAINVVV-------TPKFSVPPVGP 2314
Query: 240 IEVELGSHVVMEC 252
IE VVM C
Sbjct: 2315 IETSEQGTVVMHC 2353
>emb|X63453.1|DMDTRK D.melanogaster mRNA for gp160-Dtrk
Length = 4640
Score = 47.4 bits (111), Expect = 0.004
Identities = 45/193 (23%), Positives = 80/193 (41%)
Frame = +2
Query: 60 YRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKND 119
+ +G + + + R +H++ G L F D+G Y+C+++ L + + +
Sbjct: 1829 FDSGKDALLREDARLVLHKQNGTLSFASIIASDAGQYQCQLQ-LEAHAPINSSPGILEVI 2005
Query: 120 NGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLA 179
L F + + A K+ C K + P++ W ++ ++ L D V A
Sbjct: 2006 EQLKFVPQPTSKNLELDAVVAKVHC------KAQGTPTPQVQWVRDGENTTLPDHVEVDA 2167
Query: 180 EGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNT 239
G ++ NV + +GNYTC + T Q N + +N+ V P+F P
Sbjct: 2168 NG--TLIFRNVNSEHRGNYTC--LATNSQGQINATVAINVVV-------TPKFSVPPVGP 2314
Query: 240 IEVELGSHVVMEC 252
IE VVM C
Sbjct: 2315 IETSEQGTVVMHC 2353
>gb|L08960.1|CHKBRVO Chicken cell adhesion molecule (Bravo) mRNA, 3'end
Length = 3942
Score = 47.4 bits (111), Expect = 0.004
Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 4/287 (1%)
Frame = +1
Query: 31 YFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAAL 90
Y V+ P I C P + W+R G I H L IP A
Sbjct: 1246 YQVIADSPALIDCAYFGSPKPE----IEWFR-GVKGSILRGNEYVFHDNGTLE--IPVAQ 1404
Query: 91 EDS-GLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLEN 149
+DS G Y C R+ Q + L+V D + + +Y I +SA A C
Sbjct: 1405 KDSTGTYTCVARNKLGKTQNEVQLEV--KDPTMIIK-QPQYKVIQRSAQAS-FECV---- 1560
Query: 150 FKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGK 209
K + + P + W K+ + +D+R ++ G++ + I+NVT +D G YTC +V T +
Sbjct: 1561 IKHDPTLIPTVIWLKD-NNELPDDERFLV--GKDNLTIMNVTDKDDGTYTC-IVNTTLD- 1725
Query: 210 QYNVSRTMNLEVKESPLKMRPEFIYPN-NNTIEVELGSHVVMECNVSSGVYGLLPYWQVN 268
+VS + L V +P P IY N +++EL + + S V G + N
Sbjct: 1726 --SVSASAVLTVVAAP--PTPAIIYARPNPPLDLELTGQLERSIEL-SWVPG-----EEN 1875
Query: 269 DEDVDSFDSTYREQFYEEGMPH-GIAVSGTKFNISEVKLKDYA-YKF 313
+ + +F Y + +E G+ H V G++ + ++KL Y Y F
Sbjct: 1876 NSPITNFVIEYEDGLHEPGVWHYQTEVPGSQTTV-QLKLSPYVNYSF 2013
>emb|AL031575.1|HS127F18 Human DNA sequence from clone 127F18 on chromosome Xp11.4-21.3.
Contains part of a novel gene with some similarity to
parts of chicken Myosin Light Chain and various species'
Interleukin-1 Receptor Type 1 (IL1-R-1). Contains GSSs,
complete sequence [H>
Length = 77439
Score = 47.4 bits (111), Expect = 0.004
Identities = 24/59 (40%), Positives = 36/59 (60%)
Frame = +2
Query: 111 INLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSG 169
I+L V +ND GLC+N +MKY + + + + +I C D+E+F PEI WYK +G
Sbjct: 54338 ISLTVGENDTGLCYNSKMKYFEKAELSKSKEISCRDIEDFLLPTR-EPEILWYKVWTAG 54511
>ref|XM_070947.1| Homo sapiens hypothetical gene LOC138524 (LOC138524), mRNA
Length = 2467
Score = 47.4 bits (111), Expect = 0.004
Identities = 52/227 (22%), Positives = 88/227 (37%), Gaps = 1/227 (0%)
Frame = +1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRK-GLLWFIPA 88
N V GE +SC V+ + YNLTW R+ +P +T R A++ + IP
Sbjct: 1690 NVTVSPGETAVLSCRVLG----EAPYNLTWVRDWRVLPASTGRVAQLADLSLEISGIIPT 1857
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
D G Y+C + N + + L V + + Q V+ K+ C
Sbjct: 1858 ---DGGRYQCVASNANGVTRASVWLLVREAPQVSIHTSSQHFSQGVEV----KVSC---- 2004
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
P I W +E ++ L++ + + + ++I V +D GNY+C+
Sbjct: 2005 --SASGYPTPHISWSRESQA--LQEDSRIHVDAQGTLIIQGVAPEDAGNYSCQATNEVGT 2172
Query: 209 KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVS 255
Q T+ L + P + N + V +G V+ C S
Sbjct: 2173 DQ----ETVTLYYTD------PPSVSAVNAVVLVAVGEEAVLVCEAS 2283
>dbj|AB013803.2|AB013803 Homo sapiens mRNA for hNB-2s, complete cds
Length = 3682
Score = 47.0 bits (110), Expect = 0.005
Identities = 49/216 (22%), Positives = 89/216 (40%), Gaps = 1/216 (0%)
Frame = +2
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W +NG +P++ + +R+ G+L D+G+Y+C + + LK+ +
Sbjct: 1124 WLKNG--VPLSPQ--SRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILAS 1291
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
N ++K IV I C K + + P I W K ++ E+KR+ +
Sbjct: 1292 APTFALN-QLKKTIIVTKDQEVVIEC------KPQGSPKPTISWKKGDRA-VRENKRIAI 1447
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN 238
+ ++ ILN + D+G Y CR + + S L VKE P I
Sbjct: 1448 LP-DGSLRILNASKSDEGKYVCRGENVFGSAEIIAS----LSVKE------PTRIELTPK 1594
Query: 239 TIEVELGSHVVMECN-VSSGVYGLLPYWQVNDEDVD 273
E+ +G +V+ C + + YW + + +D
Sbjct: 1595 RTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPID 1702
>gb|AF438165.1| Camelpox virus isolate M-96 from Kazakhstan, complete genome
Length = 205719
Score = 47.0 bits (110), Expect = 0.005
Identities = 36/128 (28%), Positives = 61/128 (47%)
Frame = +3
Query: 128 MKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILI 187
+ Y QIV + G+++CP++ F N+N +I W + L +KRL I I
Sbjct: 181194 ISYPQIVNERSTGEMMCPNINAF-IASNVNADIIWSGHRR---LRNKRL-KQRTPGIITI 181358
Query: 188 LNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSH 247
+V D G YTC +Y Y+ ++ ++ N ++ + + P P I LGS+
Sbjct: 181359 EDVRKNDAGYYTCVYIYIYI*VKH-ITTNQNCKIIGTDRIIPPTMQLPEG--IVTSLGSN 181529
Query: 248 VVMECNVS 255
+ + C VS
Sbjct: 181530 LTITCRVS 181553
>ref|NM_014361.1| Homo sapiens contactin 5 (CNTN5), mRNA
Length = 3904
Score = 47.0 bits (110), Expect = 0.005
Identities = 49/216 (22%), Positives = 89/216 (40%), Gaps = 1/216 (0%)
Frame = +2
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W +NG +P++ + +R+ G+L D+G+Y+C + + LK+ +
Sbjct: 1346 WLKNG--VPLSPQ--SRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILAS 1513
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
N ++K IV I C K + + P I W K ++ E+KR+ +
Sbjct: 1514 APTFALN-QLKKTIIVTKDQEVVIEC------KPQGSPKPTISWKKGDRA-VRENKRIAI 1669
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN 238
+ ++ ILN + D+G Y CR + + S L VKE P I
Sbjct: 1670 LP-DGSLRILNASKSDEGKYVCRGENVFGSAEIIAS----LSVKE------PTRIELTPK 1816
Query: 239 TIEVELGSHVVMECN-VSSGVYGLLPYWQVNDEDVD 273
E+ +G +V+ C + + YW + + +D
Sbjct: 1817 RTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPID 1924
>dbj|AB013802.2|AB013802 Homo sapiens mRNA for hNB-2, complete cds
Length = 3904
Score = 47.0 bits (110), Expect = 0.005
Identities = 49/216 (22%), Positives = 89/216 (40%), Gaps = 1/216 (0%)
Frame = +2
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W +NG +P++ + +R+ G+L D+G+Y+C + + LK+ +
Sbjct: 1346 WLKNG--VPLSPQ--SRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILAS 1513
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
N ++K IV I C K + + P I W K ++ E+KR+ +
Sbjct: 1514 APTFALN-QLKKTIIVTKDQEVVIEC------KPQGSPKPTISWKKGDRA-VRENKRIAI 1669
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN 238
+ ++ ILN + D+G Y CR + + S L VKE P I
Sbjct: 1670 LP-DGSLRILNASKSDEGKYVCRGENVFGSAEIIAS----LSVKE------PTRIELTPK 1816
Query: 239 TIEVELGSHVVMECN-VSSGVYGLLPYWQVNDEDVD 273
E+ +G +V+ C + + YW + + +D
Sbjct: 1817 RTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPID 1924
>ref|XM_012030.4| Homo sapiens contactin 5 (CNTN5), mRNA
Length = 3779
Score = 47.0 bits (110), Expect = 0.005
Identities = 49/216 (22%), Positives = 89/216 (40%), Gaps = 1/216 (0%)
Frame = +3
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W +NG +P++ + +R+ G+L D+G+Y+C + + LK+ +
Sbjct: 1221 WLKNG--VPLSPQ--SRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILAS 1388
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
N ++K IV I C K + + P I W K ++ E+KR+ +
Sbjct: 1389 APTFALN-QLKKTIIVTKDQEVVIEC------KPQGSPKPTISWKKGDRA-VRENKRIAI 1544
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN 238
+ ++ ILN + D+G Y CR + + S L VKE P I
Sbjct: 1545 LP-DGSLRILNASKSDEGKYVCRGENVFGSAEIIAS----LSVKE------PTRIELTPK 1691
Query: 239 TIEVELGSHVVMECN-VSSGVYGLLPYWQVNDEDVD 273
E+ +G +V+ C + + YW + + +D
Sbjct: 1692 RTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPID 1799
>dbj|AK018522.1|AK018522 Mus musculus adult male colon cDNA, RIKEN full-length enriched
library, clone:9030421L11:similar to MEMBRANE
GLYCOPROTEIN, full insert sequence
Length = 2530
Score = 46.6 bits (109), Expect = 0.006
Identities = 41/186 (22%), Positives = 73/186 (39%), Gaps = 1/186 (0%)
Frame = +1
Query: 52 HSDYNLTWYRNG-SNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKI 110
H + W ++G ++ P ERR + + + + +ED G+Y C ++ S
Sbjct: 955 HPAPQIAWQKDGGTDFPAARERRMHVMPEDDVFFIVDVKIEDIGVYSCTAQNSAGSVSAN 1134
Query: 111 INLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGF 170
L V + + L D+ V + C + P ++W K+ S
Sbjct: 1135 ATLTVLETPSFL----RPLLDRTVTKGETAVLQC------IAGGSPPPRLNWTKD-DSPL 1281
Query: 171 LEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRP 230
+ +R A G ++I++ + D G YTC M T ++ NV L V +P P
Sbjct: 1282 VVTERHFFAAGNQLLIIVDSDVSDAGKYTCEMSNTLGTERGNV----RLSVIPTPTCDSP 1449
Query: 231 EFIYPN 236
P+
Sbjct: 1450 HMTAPS 1467
>ref|XM_046812.4| Homo sapiens contactin 2 (axonal) (CNTN2), mRNA
Length = 4495
Score = 46.6 bits (109), Expect = 0.006
Identities = 49/217 (22%), Positives = 94/217 (42%), Gaps = 2/217 (0%)
Frame = +2
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W RNG P+ ++ R + G L F +LEDSG+Y+C + + + L V
Sbjct: 1259 WLRNGE--PLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQAL 1426
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
N +++ +A G+I+ P + + W K + L + V
Sbjct: 1427 APDFRLN---PVRRLIPAARGGEILIP----CQPRAAPKAVVLWSKGTE--ILVNSSRVT 1579
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKE-SPLKMRPEFIYPNN 237
+ ++I N++ D+G YTC +MGK + T L V++ + + + P
Sbjct: 1580 VTPDGTLIIRNISRSDEGKYTC-FAENFMGK---ANSTGILSVRDATKITLAP------- 1726
Query: 238 NTIEVELGSHVVMECNVS-SGVYGLLPYWQVNDEDVD 273
++ ++ LG ++ ++C+ S L W ++D +D
Sbjct: 1727 SSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPID 1837
>ref|NM_017383.1| Mus musculus contactin 6 (Cntn6), mRNA
Length = 3087
Score = 46.6 bits (109), Expect = 0.006
Identities = 55/219 (25%), Positives = 90/219 (40%), Gaps = 3/219 (1%)
Frame = +1
Query: 58 TWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFK 117
TW +NG + TE R +I G L + DSG+Y+C + ++ L+V
Sbjct: 1048 TWLKNGQRL--NTEERIQIEN--GTLIITMLNISDSGIYQCAAENKYQTIYANAELRVLA 1215
Query: 118 NDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPE--IHWYKECKSGFLEDKR 175
+ N +K +V+ I C + N P+ I W K + KR
Sbjct: 1216 SAPDFSKN-PIKKISVVQVGGDISIEC--------KPNAFPKASISW-KRGTENLKQSKR 1365
Query: 176 LVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYP 235
++ E + ++ I NVT D G+YTC + N + L VKE + P
Sbjct: 1366 VLFLE-DGSLKICNVTRADAGSYTCVATNQF----GNGKSSGGLVVKERTIITVPP---- 1518
Query: 236 NNNTIEVELGSHVVMECNVS-SGVYGLLPYWQVNDEDVD 273
+ ++V +G +V+ C VS +L W N + +D
Sbjct: 1519 --SKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDIID 1629
>dbj|AB032602.1|AB032602 Mus musculus mNB-3 mRNA for neural recognition molecule NB-3,
complete cds
Length = 3087
Score = 46.6 bits (109), Expect = 0.006
Identities = 55/219 (25%), Positives = 90/219 (40%), Gaps = 3/219 (1%)
Frame = +1
Query: 58 TWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFK 117
TW +NG + TE R +I G L + DSG+Y+C + ++ L+V
Sbjct: 1048 TWLKNGQRL--NTEERIQIEN--GTLIITMLNISDSGIYQCAAENKYQTIYANAELRVLA 1215
Query: 118 NDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPE--IHWYKECKSGFLEDKR 175
+ N +K +V+ I C + N P+ I W K + KR
Sbjct: 1216 SAPDFSKN-PIKKISVVQVGGDISIEC--------KPNAFPKASISW-KRGTENLKQSKR 1365
Query: 176 LVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYP 235
++ E + ++ I NVT D G+YTC + N + L VKE + P
Sbjct: 1366 VLFLE-DGSLKICNVTRADAGSYTCVATNQF----GNGKSSGGLVVKERTIITVPP---- 1518
Query: 236 NNNTIEVELGSHVVMECNVS-SGVYGLLPYWQVNDEDVD 273
+ ++V +G +V+ C VS +L W N + +D
Sbjct: 1519 --SKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDIID 1629
>emb|X58482.1|GGNRCAM Chicken mRNA for neuronal transmembrane protein Nr-CAM, ng-CAM
related
Length = 3943
Score = 46.6 bits (109), Expect = 0.006
Identities = 74/286 (25%), Positives = 118/286 (40%), Gaps = 3/286 (1%)
Frame = +3
Query: 31 YFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAAL 90
Y V+ P I C P + W+R G I H L IP A
Sbjct: 1350 YQVIADSPALIDCAYFGSPKPE----IEWFR-GVKGSILRGNEYVFHDNGTLE--IPVAQ 1508
Query: 91 EDS-GLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLEN 149
+DS G Y C R+ Q + L+V D + + +Y I +SA A C
Sbjct: 1509 KDSTGTYTCVARNKLGKTQNEVQLEV--KDPTMIIK-QPQYKVIQRSAQAS-FECV---- 1664
Query: 150 FKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGK 209
K + + P + W K+ + +D+R ++ G++ + I+NVT +D G YTC +V T +
Sbjct: 1665 IKHDPTLIPTVIWLKD-NNELPDDERFLV--GKDNLTIMNVTDKDDGTYTC-IVNTTLD- 1829
Query: 210 QYNVSRTMNLEVKESPLKMRPEFIYPN-NNTIEVELGSHVVMECNVSSGVYGLLPYWQVN 268
+VS + L V +P P IY N +++EL + + S V G + N
Sbjct: 1830 --SVSASAVLTVVAAP--PTPAIIYARPNPPLDLELTGQLERSIEL-SWVPG-----EEN 1979
Query: 269 DEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNISEVKLKDYA-YKF 313
+ + +F Y + +E G+ H ++KL Y Y F
Sbjct: 1980 NSPITNFVIEYEDGLHEPGVWHYQTEVPGSHTTVQLKLSPYVNYSF 2117
>ref|NM_005076.1| Homo sapiens contactin 2 (axonal) (CNTN2), mRNA
Length = 4548
Score = 46.6 bits (109), Expect = 0.006
Identities = 49/217 (22%), Positives = 94/217 (42%), Gaps = 2/217 (0%)
Frame = +2
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W RNG P+ ++ R + G L F +LEDSG+Y+C + + + L V
Sbjct: 1259 WLRNGE--PLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQAL 1426
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
N +++ +A G+I+ P + + W K + L + V
Sbjct: 1427 APDFRLN---PVRRLIPAARGGEILIP----CQPRAAPKAVVLWSKGTE--ILVNSSRVT 1579
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKE-SPLKMRPEFIYPNN 237
+ ++I N++ D+G YTC +MGK + T L V++ + + + P
Sbjct: 1580 VTPDGTLIIRNISRSDEGKYTC-FAENFMGK---ANSTGILSVRDATKITLAP------- 1726
Query: 238 NTIEVELGSHVVMECNVS-SGVYGLLPYWQVNDEDVD 273
++ ++ LG ++ ++C+ S L W ++D +D
Sbjct: 1727 SSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPID 1837
>emb|X67734.1|HSTAG1A H.sapiens mRNA for transient axonal glycoprotein (tag-1)
Length = 4548
Score = 46.6 bits (109), Expect = 0.006
Identities = 49/217 (22%), Positives = 94/217 (42%), Gaps = 2/217 (0%)
Frame = +2
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W RNG P+ ++ R + G L F +LEDSG+Y+C + + + L V
Sbjct: 1259 WLRNGE--PLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQAL 1426
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
N +++ +A G+I+ P + + W K + L + V
Sbjct: 1427 APDFRLN---PVRRLIPAARGGEILIP----CQPRAAPKAVVLWSKGTE--ILVNSSRVT 1579
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKE-SPLKMRPEFIYPNN 237
+ ++I N++ D+G YTC +MGK + T L V++ + + + P
Sbjct: 1580 VTPDGTLIIRNISRSDEGKYTC-FAENFMGK---ANSTGILSVRDATKITLAP------- 1726
Query: 238 NTIEVELGSHVVMECNVS-SGVYGLLPYWQVNDEDVD 273
++ ++ LG ++ ++C+ S L W ++D +D
Sbjct: 1727 SSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPID 1837
>ref|XM_093169.1| Homo sapiens similar to dA127F18.1 (PUTATIVE novel protein with
some similarity to parts of chicken Myosin Light Chain
and various species Interleukin-1 Receptor Type 1
(IL1-R-1)) (LOC170191), mRNA
Length = 427
Score = 46.6 bits (109), Expect = 0.006
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +2
Query: 111 INLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYK 164
I+L V +ND GLC+N +MKY + + + + +I C D+E+F PEI WYK
Sbjct: 245 ISLTVGENDTGLCYNSKMKYFEKAELSKSKEISCRDIEDFLLPTR-EPEILWYK 403
>emb|X68274.1|HSTAG1 H.sapiens mRNA for TAG-1/axonin-1
Length = 4479
Score = 46.6 bits (109), Expect = 0.006
Identities = 49/217 (22%), Positives = 94/217 (42%), Gaps = 2/217 (0%)
Frame = +2
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W RNG P+ ++ R + G L F +LEDSG+Y+C + + + L V
Sbjct: 1253 WLRNGE--PLASQNRVEV--LAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQAL 1420
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
N +++ +A G+I+ P + + W K + L + V
Sbjct: 1421 APDFRLN---PVRRLIPAARGGEILIP----CQPRAAPKAVVLWSKGTE--ILVNSSRVT 1573
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKE-SPLKMRPEFIYPNN 237
+ ++I N++ D+G YTC +MGK + T L V++ + + + P
Sbjct: 1574 VTPDGTLIIRNISRSDEGKYTC-FAENFMGK---ANSTGILSVRDATKITLAP------- 1720
Query: 238 NTIEVELGSHVVMECNVS-SGVYGLLPYWQVNDEDVD 273
++ ++ LG ++ ++C+ S L W ++D +D
Sbjct: 1721 SSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPID 1831
>ref|NM_077235.1| Ig superfamily repeats (I-type)
Length = 15528
Score = 45.8 bits (107), Expect = 0.011
Identities = 49/228 (21%), Positives = 92/228 (39%), Gaps = 2/228 (0%)
Frame = +1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N +VG+ + C V P ++TW+R G + I T+ + + + G L A+
Sbjct: 4111 NNTAVVGDRVELKCYVEASPPA----SVTWFRRG--IAIGTDTKGYVVESDGTLVIQSAS 4272
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLEN 149
+ED+ +Y C ++ N + + NL+V + + ++ + +K ++ + CP N
Sbjct: 4273 VEDATIYTC--KASNPAGKAEANLQVTVIASPDIKDPDVVTQESIKESHPFSLYCPVFSN 4446
Query: 150 FKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC--RMVYTYM 207
P+I WY K + ++ + + + I D G Y C R
Sbjct: 4447 PL------PQISWYLNDKPLIDDKTSWKTSDDKRKLHVFKAKITDSGVYKCVARNAAGEG 4608
Query: 208 GKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVS 255
K + V + L + ES K + + + G V + C VS
Sbjct: 4609 SKSFQVEVIVPLNLDESKYKKK----------VFAKEGEEVTLGCPVS 4722
Score = 44.3 bits (103), Expect = 0.031
Identities = 52/255 (20%), Positives = 97/255 (37%), Gaps = 6/255 (2%)
Frame = +1
Query: 85 FIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKII- 143
F+ A DSG Y C VR+ +K+ + V N + SAN I+
Sbjct: 7894 FLSARKSDSGRYTCIVRNPAGEARKLFDFAV---------NDPPSISDELSSANIQTIVP 8046
Query: 144 -CPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRM 202
P N + +P+++W + K + L + I+ ++ G YTC
Sbjct: 8047 YYPVEINCVVSGSPHPKVYWLFDDKPLEPDSAAYELTNNGETLKIVRSQVEHAGTYTCEA 8226
Query: 203 VYTYMGKQYNVSRTMNLEVKESPLKMR-PEFIYPNNNTIEVELGSHVVMECNVSSGVYGL 261
Q NV + K+ +++ P + +G +++ CN S V
Sbjct: 8227 -------QNNVGKAR----KDFLVRVTAPPHFEKEREEVVARVGDTMLLTCNAESSVPLS 8373
Query: 262 LPYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHFIYD- 320
YW +DE V + T + A + N++ ++L D + ++C + +
Sbjct: 8374 SVYWHAHDESVQNGVITSK-----------YAANEKTLNVTNIQLDDEGF-YYCTAVNEA 8517
Query: 321 --SQEFTSYIKLEHP 333
+++F I +E P
Sbjct: 8518 GITKKFFKLIVIETP 8562
Score = 41.6 bits (96), Expect = 0.20
Identities = 39/171 (22%), Positives = 69/171 (39%)
Frame = +1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N V G+P + CP+ +H ++ + ++G + RA+ K L+ + A
Sbjct: 8851 NVEVQAGDPLTLECPIEDTSGVHITWSRQFGKDGQ-----LDMRAQSSSDKSKLYIMQAT 9015
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLEN 149
ED+ Y C + + + + V N F +IV +I C
Sbjct: 9016 PEDADSYSCIAVNDAGGAEAVFQVTV--NTPPKIFGDSFSTTEIVADTTL-EIPC----- 9171
Query: 150 FKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+ E PEI W+ + K LE + +G+ ++ I N+ +G YTC
Sbjct: 9172 -RTEGIPPPEISWFLDGKP-ILEMPGVTYKQGDLSLRIDNIKPNQEGRYTC 9318
Score = 39.3 bits (90), Expect = 1.0
Identities = 54/229 (23%), Positives = 90/229 (38%), Gaps = 5/229 (2%)
Frame = +1
Query: 31 YFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAAL 90
Y V+ + + C V + P+ +++W+R + P+ R I + A L
Sbjct: 10471 YEVIENDTITMDCGVTSRPLP----SISWFRG--DKPVYLYDRYSISPDGSHITINKAKL 10632
Query: 91 EDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENF 150
D G Y C + + + LK+ + +I KS G +
Sbjct: 10633 SDGGKYICRASNEAGTSDIDLILKI------------LVPPKIDKSNIIGNPLAIVARTI 10776
Query: 151 KDEDNIN----PEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTY 206
E I+ P++ W K + D R++LA+ I NV + D+G YTC T
Sbjct: 10777 YLECPISGIPQPDVIWTKNGMDINMTDSRVILAQNNETFGIENVQVTDQGRYTC----TA 10944
Query: 207 MGKQYNVSRTMNLEVKESPLKMRPEF-IYPNNNTIEVELGSHVVMECNV 254
+ S +L+V SP PEF I+ TI+ E G + + C +
Sbjct: 10945 TNRGGKASHDFSLDVL-SP----PEFDIHGTQPTIKRE-GDTITLTCPI 11073
Score = 38.9 bits (89), Expect = 1.3
Identities = 56/246 (22%), Positives = 94/246 (37%), Gaps = 3/246 (1%)
Frame = +1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGS---NMPITTERRARIHQRKGLLWFI 86
N V +GE + C + + + W R G+ N P TER + G L
Sbjct: 1582 NVSVPLGEAAFLHCSTRSA----GEVEIRWTRYGATVFNGP-NTER----NPTNGTLKIH 1734
Query: 87 PAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPD 146
D+G+YEC R+ + + L + + + + + Y + + N + C
Sbjct: 1735 HVTRADAGVYECMARNAGGMSTRKMRLDIMEPPS-VKVTPQDVYFNMREGVN---LSCEA 1902
Query: 147 LENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTY 206
+ + K PE+HWY + + L D + + + + I + T D+G Y CR
Sbjct: 1903 MGDPK------PEVHWYFKGRH-LLNDYKYQVGQDSKFLYIRDATHHDEGTYECRA---- 2049
Query: 207 MGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQ 266
M + T +L + P + E I N + V G V EC G W
Sbjct: 2050 MSQAGQARDTTDLMLATPP---KVEII---QNKMMVGRGDRVSFECKTIRGKPHPKIRWF 2211
Query: 267 VNDEDV 272
N +D+
Sbjct: 2212 KNGKDL 2229
Score = 37.7 bits (86), Expect = 2.9
Identities = 43/194 (22%), Positives = 77/194 (39%)
Frame = +1
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
WY G ++ + + ++ Q L+ A D G YEC R+++++ Q ++
Sbjct: 1930 WYFKGRHL--LNDYKYQVGQDSKFLYIRDATHHDEGTYEC--RAMSQAGQA-------RD 2076
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
L K + I G+ E +P+I W+K K D + +
Sbjct: 2077 TTDLMLATPPKVEIIQNKMMVGRGDRVSFECKTIRGKPHPKIRWFKNGKDLIKPDDYIKI 2256
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN 238
EG+ + I+ +D G Y+C + GK V+ NL V P I + +
Sbjct: 2257 NEGQ--LHIMGAKDEDAGAYSC-VGENMAGKDVQVA---NLSVGRVPT------IIESPH 2400
Query: 239 TIEVELGSHVVMEC 252
T+ V + V ++C
Sbjct: 2401 TVRVNIERQVTLQC 2442
Score = 36.2 bits (82), Expect = 8.5
Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 5/149 (3%)
Frame = +1
Query: 57 LTWYRNGSNMPITTERRARIH-QRKGLLWFIPAALEDSG---LYECEVRSLNRSKQKIIN 112
LTW NG MP + A IH G L + + G LY C+VR NR + I +
Sbjct: 14059 LTWEYNGVPMP---KNLAGIHFMNNGSLVILDTSSLKEGDLELYTCKVR--NRRRHSIPH 14223
Query: 113 LKVFKNDNGLCFNGEMKYDQIVK-SANAGKIICPDLENFKDEDNINPEIHWYKECKSGFL 171
L F G + I K N G + D E D + + W K +
Sbjct: 14224 LTS-------AFEGVPEVKTIDKVEVNNGDSVVLDCE--VTSDPLTTHVVWTKNDQKMLD 14376
Query: 172 EDKRLVLAEGENAILILNVTIQDKGNYTC 200
+D VL N++++LNV D+G Y C
Sbjct: 14377 DDAIYVLPN--NSLVLLNVEKYDEGVYKC 14457
>gb|AF461119.1|AF461119 Xenopus laevis roundabout-1 (robo1) mRNA, complete cds
Length = 6435
Score = 45.8 bits (107), Expect = 0.011
Identities = 57/237 (24%), Positives = 94/237 (39%), Gaps = 3/237 (1%)
Frame = +1
Query: 33 VLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALED 92
V VGEP + C P H + ++W ++G+ PI ++ RI R G L D
Sbjct: 955 VAVGEPAVMECQP---PRGHPEPTISWKKDGT--PIDDDKDERITIRGGKLMITYTRKSD 1119
Query: 93 SGLYEC-EVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFK 151
+G Y C + + ++ L V + + L M + D FK
Sbjct: 1120 AGKYVCVGTNMVGERESEVAELTVLERPSFLRRPSNM------------AVTVDDSVEFK 1263
Query: 152 DEDNIN--PEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGK 209
E + P + W K+ G L R + + ++ + I VT D G+YTC + +GK
Sbjct: 1264 CEARGDPVPTVRWRKD--DGDLPKSRYEIRD-DHTLKIRKVTAGDMGSYTC-VAENMVGK 1431
Query: 210 QYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQ 266
+ L V+E P F+ + + V LG V +C + + +WQ
Sbjct: 1432 ---AEASAVLTVQEP-----PNFVVKPRDQV-VALGRTVTFQCEATGNPQPAI-FWQ 1572
>gb|AF064799.1|AF064799 Danio rerio transiently expressed axonal glycoprotein (tag1) mRNA,
complete cds
Length = 3980
Score = 45.8 bits (107), Expect = 0.011
Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 4/244 (1%)
Frame = +1
Query: 57 LTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVF 116
+ W RNG + IT +R + G L ALEDSG+Y+C + + + L+V
Sbjct: 1324 IRWLRNGHAL-ITQDR---VEVNNGRLKIANLALEDSGMYQCVAENKHSTIYSNAELRVQ 1491
Query: 117 KNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRL 176
N K +V +A G++ K P + W + + L +
Sbjct: 1492 VQAPDFRLNPVRK---LVPAARGGQV----KMECKPRAAPKPTLFWSRGTE--LLTNSTR 1644
Query: 177 VLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKE-SPLKMRPEFIYP 235
+ + + I N++ D+G YTC Y+GK + T +L V++ + + + P
Sbjct: 1645 ITVTPDGILWIYNISRADEGKYTC-FAENYLGK---ANSTGHLSVRDATKITLAP----- 1797
Query: 236 NNNTIEVELGSHVVMECNVS-SGVYGLLPYWQVNDE--DVDSFDSTYREQFYEEGMPHGI 292
+ ++ G + ++C+ S L W +N D++ + YR +E + +
Sbjct: 1798 --SNADINQGENATLQCHASHDPTMDLTFTWSLNGVPLDLEEPNGHYRRMEGKETIGDLV 1971
Query: 293 AVSG 296
V+G
Sbjct: 1972 IVNG 1983
>ref|NM_077234.1| IG (immunoglobulin) superfamily (47 domains)
Length = 15597
Score = 45.8 bits (107), Expect = 0.011
Identities = 49/228 (21%), Positives = 92/228 (39%), Gaps = 2/228 (0%)
Frame = +1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N +VG+ + C V P ++TW+R G + I T+ + + + G L A+
Sbjct: 4111 NNTAVVGDRVELKCYVEASPPA----SVTWFRRG--IAIGTDTKGYVVESDGTLVIQSAS 4272
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLEN 149
+ED+ +Y C ++ N + + NL+V + + ++ + +K ++ + CP N
Sbjct: 4273 VEDATIYTC--KASNPAGKAEANLQVTVIASPDIKDPDVVTQESIKESHPFSLYCPVFSN 4446
Query: 150 FKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC--RMVYTYM 207
P+I WY K + ++ + + + I D G Y C R
Sbjct: 4447 PL------PQISWYLNDKPLIDDKTSWKTSDDKRKLHVFKAKITDSGVYKCVARNAAGEG 4608
Query: 208 GKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVS 255
K + V + L + ES K + + + G V + C VS
Sbjct: 4609 SKSFQVEVIVPLNLDESKYKKK----------VFAKEGEEVTLGCPVS 4722
Score = 44.3 bits (103), Expect = 0.031
Identities = 52/255 (20%), Positives = 97/255 (37%), Gaps = 6/255 (2%)
Frame = +1
Query: 85 FIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKII- 143
F+ A DSG Y C VR+ +K+ + V N + SAN I+
Sbjct: 7894 FLSARKSDSGRYTCIVRNPAGEARKLFDFAV---------NDPPSISDELSSANIQTIVP 8046
Query: 144 -CPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRM 202
P N + +P+++W + K + L + I+ ++ G YTC
Sbjct: 8047 YYPVEINCVVSGSPHPKVYWLFDDKPLEPDSAAYELTNNGETLKIVRSQVEHAGTYTCEA 8226
Query: 203 VYTYMGKQYNVSRTMNLEVKESPLKMR-PEFIYPNNNTIEVELGSHVVMECNVSSGVYGL 261
Q NV + K+ +++ P + +G +++ CN S V
Sbjct: 8227 -------QNNVGKAR----KDFLVRVTAPPHFEKEREEVVARVGDTMLLTCNAESSVPLS 8373
Query: 262 LPYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHFIYD- 320
YW +DE V + T + A + N++ ++L D + ++C + +
Sbjct: 8374 SVYWHAHDESVQNGVITSK-----------YAANEKTLNVTNIQLDDEGF-YYCTAVNEA 8517
Query: 321 --SQEFTSYIKLEHP 333
+++F I +E P
Sbjct: 8518 GITKKFFKLIVIETP 8562
Score = 41.6 bits (96), Expect = 0.20
Identities = 39/171 (22%), Positives = 69/171 (39%)
Frame = +1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N V G+P + CP+ +H ++ + ++G + RA+ K L+ + A
Sbjct: 8851 NVEVQAGDPLTLECPIEDTSGVHITWSRQFGKDGQ-----LDMRAQSSSDKSKLYIMQAT 9015
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLEN 149
ED+ Y C + + + + V N F +IV +I C
Sbjct: 9016 PEDADSYSCIAVNDAGGAEAVFQVTV--NTPPKIFGDSFSTTEIVADTTL-EIPC----- 9171
Query: 150 FKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+ E PEI W+ + K LE + +G+ ++ I N+ +G YTC
Sbjct: 9172 -RTEGIPPPEISWFLDGKP-ILEMPGVTYKQGDLSLRIDNIKPNQEGRYTC 9318
Score = 39.3 bits (90), Expect = 1.0
Identities = 54/229 (23%), Positives = 90/229 (38%), Gaps = 5/229 (2%)
Frame = +1
Query: 31 YFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAAL 90
Y V+ + + C V + P+ +++W+R + P+ R I + A L
Sbjct: 10471 YEVIENDTITMDCGVTSRPLP----SISWFRG--DKPVYLYDRYSISPDGSHITINKAKL 10632
Query: 91 EDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENF 150
D G Y C + + + LK+ + +I KS G +
Sbjct: 10633 SDGGKYICRASNEAGTSDIDLILKI------------LVPPKIDKSNIIGNPLAIVARTI 10776
Query: 151 KDEDNIN----PEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTY 206
E I+ P++ W K + D R++LA+ I NV + D+G YTC T
Sbjct: 10777 YLECPISGIPQPDVIWTKNGMDINMTDSRVILAQNNETFGIENVQVTDQGRYTC----TA 10944
Query: 207 MGKQYNVSRTMNLEVKESPLKMRPEF-IYPNNNTIEVELGSHVVMECNV 254
+ S +L+V SP PEF I+ TI+ E G + + C +
Sbjct: 10945 TNRGGKASHDFSLDVL-SP----PEFDIHGTQPTIKRE-GDTITLTCPI 11073
Score = 38.9 bits (89), Expect = 1.3
Identities = 56/246 (22%), Positives = 94/246 (37%), Gaps = 3/246 (1%)
Frame = +1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGS---NMPITTERRARIHQRKGLLWFI 86
N V +GE + C + + + W R G+ N P TER + G L
Sbjct: 1582 NVSVPLGEAAFLHCSTRSA----GEVEIRWTRYGATVFNGP-NTER----NPTNGTLKIH 1734
Query: 87 PAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPD 146
D+G+YEC R+ + + L + + + + + Y + + N + C
Sbjct: 1735 HVTRADAGVYECMARNAGGMSTRKMRLDIMEPPS-VKVTPQDVYFNMREGVN---LSCEA 1902
Query: 147 LENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTY 206
+ + K PE+HWY + + L D + + + + I + T D+G Y CR
Sbjct: 1903 MGDPK------PEVHWYFKGRH-LLNDYKYQVGQDSKFLYIRDATHHDEGTYECRA---- 2049
Query: 207 MGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQ 266
M + T +L + P + E I N + V G V EC G W
Sbjct: 2050 MSQAGQARDTTDLMLATPP---KVEII---QNKMMVGRGDRVSFECKTIRGKPHPKIRWF 2211
Query: 267 VNDEDV 272
N +D+
Sbjct: 2212 KNGKDL 2229
Score = 37.7 bits (86), Expect = 2.9
Identities = 43/194 (22%), Positives = 77/194 (39%)
Frame = +1
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
WY G ++ + + ++ Q L+ A D G YEC R+++++ Q ++
Sbjct: 1930 WYFKGRHL--LNDYKYQVGQDSKFLYIRDATHHDEGTYEC--RAMSQAGQA-------RD 2076
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
L K + I G+ E +P+I W+K K D + +
Sbjct: 2077 TTDLMLATPPKVEIIQNKMMVGRGDRVSFECKTIRGKPHPKIRWFKNGKDLIKPDDYIKI 2256
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN 238
EG+ + I+ +D G Y+C + GK V+ NL V P I + +
Sbjct: 2257 NEGQ--LHIMGAKDEDAGAYSC-VGENMAGKDVQVA---NLSVGRVPT------IIESPH 2400
Query: 239 TIEVELGSHVVMEC 252
T+ V + V ++C
Sbjct: 2401 TVRVNIERQVTLQC 2442
Score = 36.2 bits (82), Expect = 8.5
Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 5/149 (3%)
Frame = +1
Query: 57 LTWYRNGSNMPITTERRARIH-QRKGLLWFIPAALEDSG---LYECEVRSLNRSKQKIIN 112
LTW NG MP + A IH G L + + G LY C+VR NR + I +
Sbjct: 14059 LTWEYNGVPMP---KNLAGIHFMNNGSLVILDTSSLKEGDLELYTCKVR--NRRRHSIPH 14223
Query: 113 LKVFKNDNGLCFNGEMKYDQIVK-SANAGKIICPDLENFKDEDNINPEIHWYKECKSGFL 171
L F G + I K N G + D E D + + W K +
Sbjct: 14224 LTS-------AFEGVPEVKTIDKVEVNNGDSVVLDCE--VTSDPLTTHVVWTKNDQKMLD 14376
Query: 172 EDKRLVLAEGENAILILNVTIQDKGNYTC 200
+D VL N++++LNV D+G Y C
Sbjct: 14377 DDAIYVLPN--NSLVLLNVEKYDEGVYKC 14457
>gb|AF074901.1|AF074901 Caenorhabditis elegans hemicentin precursor (him-4) mRNA, complete
cds
Length = 15597
Score = 45.8 bits (107), Expect = 0.011
Identities = 49/228 (21%), Positives = 92/228 (39%), Gaps = 2/228 (0%)
Frame = +1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N +VG+ + C V P ++TW+R G + I T+ + + + G L A+
Sbjct: 4111 NNTAVVGDRVELKCYVEASPPA----SVTWFRRG--IAIGTDTKGYVVESDGTLVIQSAS 4272
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLEN 149
+ED+ +Y C ++ N + + NL+V + + ++ + +K ++ + CP N
Sbjct: 4273 VEDATIYTC--KASNPAGKAEANLQVTVIASPDIKDPDVVTQESIKESHPFSLYCPVFSN 4446
Query: 150 FKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC--RMVYTYM 207
P+I WY K + ++ + + + I D G Y C R
Sbjct: 4447 PL------PQISWYLNDKPLIDDKTSWKTSDDKRKLHVFKAKITDSGVYKCVARNAAGEG 4608
Query: 208 GKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVS 255
K + V + L + ES K + + + G V + C VS
Sbjct: 4609 SKSFQVEVIVPLNLDESKYKKK----------VFAKEGEEVTLGCPVS 4722
Score = 44.3 bits (103), Expect = 0.031
Identities = 52/255 (20%), Positives = 97/255 (37%), Gaps = 6/255 (2%)
Frame = +1
Query: 85 FIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKII- 143
F+ A DSG Y C VR+ +K+ + V N + SAN I+
Sbjct: 7894 FLSARKSDSGRYTCIVRNPAGEARKLFDFAV---------NDPPSISDELSSANIQTIVP 8046
Query: 144 -CPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRM 202
P N + +P+++W + K + L + I+ ++ G YTC
Sbjct: 8047 YYPVEINCVVSGSPHPKVYWLFDDKPLEPDSAAYELTNNGETLKIVRSQVEHAGTYTCEA 8226
Query: 203 VYTYMGKQYNVSRTMNLEVKESPLKMR-PEFIYPNNNTIEVELGSHVVMECNVSSGVYGL 261
Q NV + K+ +++ P + +G +++ CN S V
Sbjct: 8227 -------QNNVGKAR----KDFLVRVTAPPHFEKEREEVVARVGDTMLLTCNAESSVPLS 8373
Query: 262 LPYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAYKFFCHFIYD- 320
YW +DE V + T + A + N++ ++L D + ++C + +
Sbjct: 8374 SVYWHAHDESVQNGVITSK-----------YAANEKTLNVTNIQLDDEGF-YYCTAVNEA 8517
Query: 321 --SQEFTSYIKLEHP 333
+++F I +E P
Sbjct: 8518 GITKKFFKLIVIETP 8562
Score = 41.6 bits (96), Expect = 0.20
Identities = 39/171 (22%), Positives = 69/171 (39%)
Frame = +1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N V G+P + CP+ +H ++ + ++G + RA+ K L+ + A
Sbjct: 8851 NVEVQAGDPLTLECPIEDTSGVHITWSRQFGKDGQ-----LDMRAQSSSDKSKLYIMQAT 9015
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLEN 149
ED+ Y C + + + + V N F +IV +I C
Sbjct: 9016 PEDADSYSCIAVNDAGGAEAVFQVTV--NTPPKIFGDSFSTTEIVADTTL-EIPC----- 9171
Query: 150 FKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+ E PEI W+ + K LE + +G+ ++ I N+ +G YTC
Sbjct: 9172 -RTEGIPPPEISWFLDGKP-ILEMPGVTYKQGDLSLRIDNIKPNQEGRYTC 9318
Score = 39.3 bits (90), Expect = 1.0
Identities = 54/229 (23%), Positives = 90/229 (38%), Gaps = 5/229 (2%)
Frame = +1
Query: 31 YFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAAL 90
Y V+ + + C V + P+ +++W+R + P+ R I + A L
Sbjct: 10471 YEVIENDTITMDCGVTSRPLP----SISWFRG--DKPVYLYDRYSISPDGSHITINKAKL 10632
Query: 91 EDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENF 150
D G Y C + + + LK+ + +I KS G +
Sbjct: 10633 SDGGKYICRASNEAGTSDIDLILKI------------LVPPKIDKSNIIGNPLAIVARTI 10776
Query: 151 KDEDNIN----PEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTY 206
E I+ P++ W K + D R++LA+ I NV + D+G YTC T
Sbjct: 10777 YLECPISGIPQPDVIWTKNGMDINMTDSRVILAQNNETFGIENVQVTDQGRYTC----TA 10944
Query: 207 MGKQYNVSRTMNLEVKESPLKMRPEF-IYPNNNTIEVELGSHVVMECNV 254
+ S +L+V SP PEF I+ TI+ E G + + C +
Sbjct: 10945 TNRGGKASHDFSLDVL-SP----PEFDIHGTQPTIKRE-GDTITLTCPI 11073
Score = 38.9 bits (89), Expect = 1.3
Identities = 56/246 (22%), Positives = 94/246 (37%), Gaps = 3/246 (1%)
Frame = +1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGS---NMPITTERRARIHQRKGLLWFI 86
N V +GE + C + + + W R G+ N P TER + G L
Sbjct: 1582 NVSVPLGEAAFLHCSTRSA----GEVEIRWTRYGATVFNGP-NTER----NPTNGTLKIH 1734
Query: 87 PAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPD 146
D+G+YEC R+ + + L + + + + + Y + + N + C
Sbjct: 1735 HVTRADAGVYECMARNAGGMSTRKMRLDIMEPPS-VKVTPQDVYFNMREGVN---LSCEA 1902
Query: 147 LENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTY 206
+ + K PE+HWY + + L D + + + + I + T D+G Y CR
Sbjct: 1903 MGDPK------PEVHWYFKGRH-LLNDYKYQVGQDSKFLYIRDATHHDEGTYECRA---- 2049
Query: 207 MGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQ 266
M + T +L + P + E I N + V G V EC G W
Sbjct: 2050 MSQAGQARDTTDLMLATPP---KVEII---QNKMMVGRGDRVSFECKTIRGKPHPKIRWF 2211
Query: 267 VNDEDV 272
N +D+
Sbjct: 2212 KNGKDL 2229
Score = 37.7 bits (86), Expect = 2.9
Identities = 43/194 (22%), Positives = 77/194 (39%)
Frame = +1
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
WY G ++ + + ++ Q L+ A D G YEC R+++++ Q ++
Sbjct: 1930 WYFKGRHL--LNDYKYQVGQDSKFLYIRDATHHDEGTYEC--RAMSQAGQA-------RD 2076
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
L K + I G+ E +P+I W+K K D + +
Sbjct: 2077 TTDLMLATPPKVEIIQNKMMVGRGDRVSFECKTIRGKPHPKIRWFKNGKDLIKPDDYIKI 2256
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN 238
EG+ + I+ +D G Y+C + GK V+ NL V P I + +
Sbjct: 2257 NEGQ--LHIMGAKDEDAGAYSC-VGENMAGKDVQVA---NLSVGRVPT------IIESPH 2400
Query: 239 TIEVELGSHVVMEC 252
T+ V + V ++C
Sbjct: 2401 TVRVNIERQVTLQC 2442
Score = 36.2 bits (82), Expect = 8.5
Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 5/149 (3%)
Frame = +1
Query: 57 LTWYRNGSNMPITTERRARIH-QRKGLLWFIPAALEDSG---LYECEVRSLNRSKQKIIN 112
LTW NG MP + A IH G L + + G LY C+VR NR + I +
Sbjct: 14059 LTWEYNGVPMP---KNLAGIHFMNNGSLVILDTSSLKEGDLELYTCKVR--NRRRHSIPH 14223
Query: 113 LKVFKNDNGLCFNGEMKYDQIVK-SANAGKIICPDLENFKDEDNINPEIHWYKECKSGFL 171
L F G + I K N G + D E D + + W K +
Sbjct: 14224 LTS-------AFEGVPEVKTIDKVEVNNGDSVVLDCE--VTSDPLTTHVVWTKNDQKMLD 14376
Query: 172 EDKRLVLAEGENAILILNVTIQDKGNYTC 200
+D VL N++++LNV D+G Y C
Sbjct: 14377 DDAIYVLPN--NSLVLLNVEKYDEGVYKC 14457
>dbj|AB050468.1|AB050468 Homo sapiens mRNA for membrane glycoprotein LIG-1, complete cds
Length = 5287
Score = 45.1 bits (105), Expect = 0.018
Identities = 38/180 (21%), Positives = 72/180 (39%), Gaps = 1/180 (0%)
Frame = +1
Query: 52 HSDYNLTWYRNG-SNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKI 110
H + + W ++G ++ P ERR + + + ++D+G+Y C ++ S
Sbjct: 2392 HPNPQIAWQKDGGTDFPAARERRMHVMPDDDVFFITDVKIDDAGVYSCTAQNSAGSISAN 2571
Query: 111 INLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGF 170
L V + + + D++V + C K N P I W+K +
Sbjct: 2572 ATLTVLETPSLVV----PLEDRVVSVGETVALQC------KATGNPPPRITWFKGDRPLS 2721
Query: 171 LEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRP 230
L ++ + + + +++ NV +D G YTC M S T+ E S L + P
Sbjct: 2722 LTERHHLTPDNQ-LLVVQNVVAEDAGRYTCEM-----------SNTLGTERAHSQLSVLP 2865
>gb|AF176552.1|AF176552 Mus musculus fibroblast growth factor receptor 1-IIIb mRNA,
complete cds
Length = 2912
Score = 45.1 bits (105), Expect = 0.018
Identities = 52/186 (27%), Positives = 78/186 (40%), Gaps = 7/186 (3%)
Frame = +1
Query: 134 VKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRL---VLAEGENAILILNV 190
V +A K CP NP + W K K F D R+ + +I++ +V
Sbjct: 286 VPAAKTVKFKCPS------SGTPNPTLRWLKNGKE-FKPDHRIGGYKVRYATWSIIMDSV 444
Query: 191 TIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKE-SPLKMRPEFIYPNNNTIEVELGSHVV 249
DKGNYTC + Y +++ T L+V E SP + + P N T V LGS+V
Sbjct: 445 VPSDKGNYTCIVENEY----GSINHTYQLDVVERSPHRPILQAGLPANKT--VALGSNVE 606
Query: 250 MECNVSSGV---YGLLPYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNISEVKL 306
C V S L + +VN + + Y + G+ A T FN++E +
Sbjct: 607 FMCKVYSDPQPHIQWLKHIEVNGSKIGPDNLPYVQILKHSGINSSDAEVLTLFNVTEAQS 786
Query: 307 KDYAYK 312
+Y K
Sbjct: 787 GEYVCK 804
>emb|AL117666.1|HSM801204 Homo sapiens mRNA; cDNA DKFZp586O1624 (from clone DKFZp586O1624);
partial cds
Length = 2958
Score = 45.1 bits (105), Expect = 0.018
Identities = 38/180 (21%), Positives = 72/180 (39%), Gaps = 1/180 (0%)
Frame = +2
Query: 52 HSDYNLTWYRNG-SNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKI 110
H + + W ++G ++ P ERR + + + ++D+G+Y C ++ S
Sbjct: 44 HPNPQIAWQKDGGTDFPAARERRMHVMPDDDVFFITDVKIDDAGVYSCTAQNSAGSISAN 223
Query: 111 INLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGF 170
L V + + + D++V + C K N P I W+K +
Sbjct: 224 ATLTVLETPSLVV----PLEDRVVSVGETVALQC------KATGNPPPRITWFKGDRPLS 373
Query: 171 LEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRP 230
L ++ + + + +++ NV +D G YTC M S T+ E S L + P
Sbjct: 374 LTERHHLTPDNQ-LLVVQNVVAEDAGRYTCEM-----------SNTLGTERAHSQLSVLP 517
>ref|NM_023059.1| Mus musculus single Ig IL-1 receptor related protein
(Sigirr-pending), mRNA
Length = 1540
Score = 45.1 bits (105), Expect = 0.018
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 8/194 (4%)
Frame = +1
Query: 358 VYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLY---PKNRESCLYSSDIFALKILP 414
+Y +++++LWY+ + + +++DGK+YDAYV Y P++R+ F IL
Sbjct: 523 LYVKCRLNMLLWYQDTYREV---EMNDGKLYDAYVSYSDCPEDRK--------FVNFILK 669
Query: 415 EVLERQCGYNLFIFGRNDL-AGEAVIDVTDEKIHQSRRVIIIL----VPEPSCYGILEDA 469
LER+ GY LF+ R+ L +A D+ + + RR+I++L + P C +
Sbjct: 670 PQLERRRGYKLFLEDRDLLPRADASADLL-VNLSRCRRLIVVLSDAFLSRPWC----SQS 834
Query: 470 SEKHLAVYNALIQDGXXXXXXXXXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSAS 529
+ A Y + D Y + S ++ + + W S + S
Sbjct: 835 FREDCAAYWSSPAD-LSSSPLRARGVSPYTLLSGSCRHDRHLVTLVLW----KPGSVTPS 999
Query: 530 TRFWKKVRYHMPSR 543
+ FWK+++ +P +
Sbjct: 1000SDFWKELQLALPRK 1041
>gb|AF113795.1|AF113795 Mus musculus toll/interleukin-1 receptor 8 (TIR8) mRNA, complete
cds
Length = 1540
Score = 45.1 bits (105), Expect = 0.018
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 8/194 (4%)
Frame = +1
Query: 358 VYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLY---PKNRESCLYSSDIFALKILP 414
+Y +++++LWY+ + + +++DGK+YDAYV Y P++R+ F IL
Sbjct: 523 LYVKCRLNMLLWYQDTYREV---EMNDGKLYDAYVSYSDCPEDRK--------FVNFILK 669
Query: 415 EVLERQCGYNLFIFGRNDL-AGEAVIDVTDEKIHQSRRVIIIL----VPEPSCYGILEDA 469
LER+ GY LF+ R+ L +A D+ + + RR+I++L + P C +
Sbjct: 670 PQLERRRGYKLFLEDRDLLPRADASADLL-VNLSRCRRLIVVLSDAFLSRPWC----SQS 834
Query: 470 SEKHLAVYNALIQDGXXXXXXXXXXXXDYANMPESIKYVKQKYGAIRWTGDFSERSHSAS 529
+ A Y + D Y + S ++ + + W S + S
Sbjct: 835 FREDCAAYWSSPAD-LSSSPLRARGVSPYTLLSGSCRHDRHLVTLVLW----KPGSVTPS 999
Query: 530 TRFWKKVRYHMPSR 543
+ FWK+++ +P +
Sbjct: 1000SDFWKELQLALPRK 1041
>ref|NM_013225.1| Rattus norvegicus contactin 6 (Cntn6), mRNA
Length = 3413
Score = 45.1 bits (105), Expect = 0.018
Identities = 55/219 (25%), Positives = 89/219 (40%), Gaps = 3/219 (1%)
Frame = +2
Query: 58 TWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFK 117
TW +NG + TE R I G L + DSG+Y+C + ++ L+V
Sbjct: 1235 TWLKNGERL--NTEER--IQTENGTLIITMLNVSDSGIYQCAAENKYQTIYANAELRVLA 1402
Query: 118 NDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPE--IHWYKECKSGFLEDKR 175
+ N +K +V+ I C + N P+ I W K + KR
Sbjct: 1403 SAPDFSKN-PIKKISVVQVGGDISIEC--------KPNAFPKASISW-KRGTENLKQSKR 1552
Query: 176 LVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYP 235
+ E + ++ I NVT D G+YTC + N + +L VKE + P
Sbjct: 1553 VFFLE-DGSLKICNVTRSDAGSYTCVATNQF----GNGKSSGSLIVKERTVITVPP---- 1705
Query: 236 NNNTIEVELGSHVVMECNVS-SGVYGLLPYWQVNDEDVD 273
+ ++V +G +V+ C VS +L W N + +D
Sbjct: 1706 --SKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDVID 1816
>gb|AF381545.1|AF381545 Homo sapiens membrane glycoprotein LIG-1 mRNA, complete cds
Length = 4762
Score = 45.1 bits (105), Expect = 0.018
Identities = 38/180 (21%), Positives = 72/180 (39%), Gaps = 1/180 (0%)
Frame = +3
Query: 52 HSDYNLTWYRNG-SNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKI 110
H + + W ++G ++ P ERR + + + ++D+G+Y C ++ S
Sbjct: 1887 HPNPQIAWQKDGGTDFPAARERRMHVMPDDDVFFITDVKIDDAGVYSCTAQNSAGSISAN 2066
Query: 111 INLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGF 170
L V + + + D++V + C K N P I W+K +
Sbjct: 2067 ATLTVLETPSLVV----PLEDRVVSVGETVALQC------KATGNPPPRITWFKGDRPLS 2216
Query: 171 LEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRP 230
L ++ + + + +++ NV +D G YTC M S T+ E S L + P
Sbjct: 2217 LTERHHLTPDNQ-LLVVQNVVAEDAGRYTCEM-----------SNTLGTERAHSQLSVLP 2360
>gb|AF336128.1|AF336128S1 Lumpy skin disease virus strain Neethling, 5' partial sequence
Length = 12518
Score = 45.1 bits (105), Expect = 0.018
Identities = 55/256 (21%), Positives = 105/256 (40%), Gaps = 14/256 (5%)
Frame = -3
Query: 75 RIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIV 134
R++ LW DSG+Y C V + + L ++K + + ++
Sbjct: 4737 RVYSVGHSLWINNITKNDSGIYACNVHNSTYYFTSSVMLDIYKKET---------INSVI 4585
Query: 135 KSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQD 194
+++C + +NF + N + E++W K+ + + + + +LI N++ D
Sbjct: 4584 --GTNYELLCINTKNFINTFNCSYEVNWVKDREK---INNNFKYKKSKEKLLIRNISKSD 4420
Query: 195 KGNYTCRMV-------YTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSH 247
+G Y C + K+Y + + K+ + + F+ N+TI LG +
Sbjct: 4419 EGVYLCSITTATRCNPKNLALKRYYHNNVIKKRFKDD-INLTVNFL---NSTI--ALGKN 4258
Query: 248 VVMECNVSS----GVYGLLPYWQVNDEDVDSFD---STYREQFYEEGMPHGIAVSGTKFN 300
+MEC S VY +W +N +V +D + Y + G + IA+
Sbjct: 4257 FLMECIGESKNIQRVYRSSIFWLINGVNVLDYDRSKNIYLGREMYVGNSYKIALI----- 4093
Query: 301 ISEVKLKDYAYKFFCH 316
I EVK K + F C+
Sbjct: 4092 IKEVKRKYLSANFTCN 4045
>dbj|D87248.1|D87248 Rattus norvegicus mRNA for NB-3, complete cds
Length = 3413
Score = 45.1 bits (105), Expect = 0.018
Identities = 55/219 (25%), Positives = 89/219 (40%), Gaps = 3/219 (1%)
Frame = +2
Query: 58 TWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFK 117
TW +NG + TE R I G L + DSG+Y+C + ++ L+V
Sbjct: 1235 TWLKNGERL--NTEER--IQTENGTLIITMLNVSDSGIYQCAAENKYQTIYANAELRVLA 1402
Query: 118 NDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPE--IHWYKECKSGFLEDKR 175
+ N +K +V+ I C + N P+ I W K + KR
Sbjct: 1403 SAPDFSKN-PIKKISVVQVGGDISIEC--------KPNAFPKASISW-KRGTENLKQSKR 1552
Query: 176 LVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYP 235
+ E + ++ I NVT D G+YTC + N + +L VKE + P
Sbjct: 1553 VFFLE-DGSLKICNVTRSDAGSYTCVATNQF----GNGKSSGSLIVKERTVITVPP---- 1705
Query: 236 NNNTIEVELGSHVVMECNVS-SGVYGLLPYWQVNDEDVD 273
+ ++V +G +V+ C VS +L W N + +D
Sbjct: 1706 --SKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDVID 1816
>ref|XM_033712.3| Homo sapiens ortholog of mouse integral membrane glycoprotein LIG-1
(LIG1), mRNA
Length = 5267
Score = 45.1 bits (105), Expect = 0.018
Identities = 38/180 (21%), Positives = 72/180 (39%), Gaps = 1/180 (0%)
Frame = +2
Query: 52 HSDYNLTWYRNG-SNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKI 110
H + + W ++G ++ P ERR + + + ++D+G+Y C ++ S
Sbjct: 2393 HPNPQIAWQKDGGTDFPAARERRMHVMPDDDVFFITDVKIDDAGVYSCTAQNSAGSISAN 2572
Query: 111 INLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGF 170
L V + + + D++V + C K N P I W+K +
Sbjct: 2573 ATLTVLETPSLVV----PLEDRVVSVGETVALQC------KATGNPPPRITWFKGDRPLS 2722
Query: 171 LEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRP 230
L ++ + + + +++ NV +D G YTC M S T+ E S L + P
Sbjct: 2723 LTERHHLTPDNQ-LLVVQNVVAEDAGRYTCEM-----------SNTLGTERAHSQLSVLP 2866
>ref|NM_080531.1| Drosophila melanogaster leak (lea), mRNA
Length = 5381
Score = 44.3 bits (103), Expect = 0.031
Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 1/239 (0%)
Frame = +2
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N V GE + C P + ++W +NG + + +R RI G L A
Sbjct: 854 NTRVAQGEVALMECGA---PRGSPEPQISWRKNGQTLNLVGNKRIRIVDG-GNLAIQEAR 1021
Query: 90 LEDSGLYECEVRSLNRSKQKIIN-LKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
D G Y+C V+++ +++ LKV G +V S+ +
Sbjct: 1022 QSDDGRYQCVVKNVVGTRESATAFLKVHVRP--FLIRGPQNQTAVVGSSVVFQC------ 1177
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
+ + P++ W + G + +R+ + E + ++ + +VT++D G YTC G
Sbjct: 1178 --RIGGDPLPDVLWRRTASGGNMPLRRVHVLE-DRSLKLDDVTLEDMGEYTCEADNAVGG 1348
Query: 209 KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQV 267
++ T L V P+F+ N + VE+G V+ EC + L YW V
Sbjct: 1349 ----ITATGILTVHAP-----PKFVIRPKNQL-VEIGDEVLFECQANGHPRPTL-YWSV 1492
>gb|AF312579.1|AF312579 Drosophila melanogaster roundabout 2 (robo2) mRNA, complete cds
Length = 5381
Score = 44.3 bits (103), Expect = 0.031
Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 1/239 (0%)
Frame = +2
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N V GE + C P + ++W +NG + + +R RI G L A
Sbjct: 854 NTRVAQGEVALMECGA---PRGSPEPQISWRKNGQTLNLVGNKRIRIVDG-GNLAIQEAR 1021
Query: 90 LEDSGLYECEVRSLNRSKQKIIN-LKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
D G Y+C V+++ +++ LKV G +V S+ +
Sbjct: 1022 QSDDGRYQCVVKNVVGTRESATAFLKVHVRP--FLIRGPQNQTAVVGSSVVFQC------ 1177
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
+ + P++ W + G + +R+ + E + ++ + +VT++D G YTC G
Sbjct: 1178 --RIGGDPLPDVLWRRTASGGNMPLRRVHVLE-DRSLKLDDVTLEDMGEYTCEADNAVGG 1348
Query: 209 KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQV 267
++ T L V P+F+ N + VE+G V+ EC + L YW V
Sbjct: 1349 ----ITATGILTVHAP-----PKFVIRPKNQL-VEIGDEVLFECQANGHPRPTL-YWSV 1492
>dbj|D85084.1|D85084 Cynops pyrrhogaster mRNA for NCAM-180, NCAM-140, complete cds
Length = 4398
Score = 43.9 bits (102), Expect = 0.041
Identities = 57/278 (20%), Positives = 110/278 (39%), Gaps = 2/278 (0%)
Frame = +3
Query: 36 GEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGL 95
GE + C V+++ ++ W G ++ + + R + L D G+
Sbjct: 615 GEDAVVVCDVVSV----QTPSVMWKHKGRDVVLKKDVRFVV-LANNYLQIRGIKKTDEGM 779
Query: 96 YECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGK--IICPDLENFKDE 153
Y CE R R + +++V N + + + + +AN G+ ++ D + F D
Sbjct: 780 YRCEGRIQARGEIAFKDIQVVVN---VAPSVRARQTTVNATANLGEAAVLACDADGFPD- 947
Query: 154 DNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNV 213
PEI W K+ + + + E + + I N+ D+G+YTC + G+Q
Sbjct: 948 ----PEISWTKDGEMIEDDSDKYKFTEDGSEMTIFNIDKSDEGDYTC-IAENKAGEQ--- 1103
Query: 214 SRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVD 273
++ L+V +P+ Y N T +EL + + C S + W++ ++
Sbjct: 1104EASILLKV-----YAKPKITYVENKT-AMELEEQITLTCEASGDPTPSIT-WRMATRNIS 1262
Query: 274 SFDSTYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAY 311
S + T G V + +S + L D Y
Sbjct: 1263SDEKTL----------DGRIVVSSHARVSSLTLNDIQY 1346
>ref|NM_013062.1| Rattus norvegicus FLK1 kinase insert domain receptor (VEGF receptor
2) (Kdr), mRNA
Length = 5892
Score = 43.9 bits (102), Expect = 0.041
Identities = 40/167 (23%), Positives = 65/167 (37%), Gaps = 21/167 (12%)
Frame = +3
Query: 56 NLTWYRNGSNMPIT--TERRARIHQRKGLLW------------------FIPAALEDSGL 95
NLTWY+ GS E + + LW F A+L+D G
Sbjct: 1974 NLTWYKLGSQATSVHMGESLTPVCKNLDALWKLNGTVFSNSTNDILIVAFQNASLQDQGN 2153
Query: 96 YECEVRSLNRSKQK-IINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDED 154
Y C + K+ ++ V G ++ +Q +++CP
Sbjct: 2154 YVCSAQDKKTKKRHCLVKQLVILERMAPMITGNLE-NQTTTIGETIEVVCP------TSG 2312
Query: 155 NINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
N P I W+K+ ++ +ED +VL +G + I V +D G YTC+
Sbjct: 2313 NPTPLITWFKDNET-LVEDSGIVLKDGNRNLTIRRVRKEDGGLYTCQ 2450
>gb|U93306.1|RNU93306 Rattus norvegicus VEGF receptor-2/FLK-1 mRNA, complete cds
Length = 5892
Score = 43.9 bits (102), Expect = 0.041
Identities = 40/167 (23%), Positives = 65/167 (37%), Gaps = 21/167 (12%)
Frame = +3
Query: 56 NLTWYRNGSNMPIT--TERRARIHQRKGLLW------------------FIPAALEDSGL 95
NLTWY+ GS E + + LW F A+L+D G
Sbjct: 1974 NLTWYKLGSQATSVHMGESLTPVCKNLDALWKLNGTVFSNSTNDILIVAFQNASLQDQGN 2153
Query: 96 YECEVRSLNRSKQK-IINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDED 154
Y C + K+ ++ V G ++ +Q +++CP
Sbjct: 2154 YVCSAQDKKTKKRHCLVKQLVILERMAPMITGNLE-NQTTTIGETIEVVCP------TSG 2312
Query: 155 NINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
N P I W+K+ ++ +ED +VL +G + I V +D G YTC+
Sbjct: 2313 NPTPLITWFKDNET-LVEDSGIVLKDGNRNLTIRRVRKEDGGLYTCQ 2450
>dbj|D11474.1|CHKMP Chicken mRNA for M-protein, complete cds
Length = 5213
Score = 43.9 bits (102), Expect = 0.041
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 27/219 (12%)
Frame = +3
Query: 48 LPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWF--IPAALEDSGLYECEVRSLNR 105
L + + +TW S I++ + +I + + W +D G Y E+ S
Sbjct: 3804 LKYYNEEMKVTWSHRESK--ISSGEKMKIGGGEDVAWLQITEPTEKDKGNYTFEIFSDKE 3977
Query: 106 SKQKIINLKVFKNDNGLCFNGEMKYDQIVKSA-----NAGKII--CPDLENFKDEDNIN- 157
S ++ ++L +G F+ + Q +K+A N GK+I PD+ D +N
Sbjct: 3978 SFKRTLDL------SGQAFDDALTEFQRLKAAAFAEKNRGKVIGGLPDVVTIMDGKTLNL 4139
Query: 158 ---------PEIHWYKECKSGFLEDKRLV-LAEGENAIL-ILNVTIQDKGNYTCRMVYTY 206
PE+ W+K K+ L + LV L +G+ A L I VT +D G Y+ + Y
Sbjct: 4140 TCTVFGNPDPEVVWFKNDKALELNEHYLVSLEQGKYASLTIKGVTSEDSGKYSIYVKNKY 4319
Query: 207 MGKQYNVSRTMNL------EVKESPLKMRPEFIYPNNNT 239
G+ +V+ ++ EV + L +P I P+++T
Sbjct: 4320 GGETVDVTVSVYRHGEKIPEVNQGQL-AKPRLIPPSSST 4433
>gb|U93307.1|RNU93307 Rattus norvegicus C-terminal truncated VEGF receptor-2/FLK-1 mRNA,
complete cds
Length = 4016
Score = 43.9 bits (102), Expect = 0.041
Identities = 40/167 (23%), Positives = 65/167 (37%), Gaps = 21/167 (12%)
Frame = +3
Query: 56 NLTWYRNGSNMPIT--TERRARIHQRKGLLW------------------FIPAALEDSGL 95
NLTWY+ GS E + + LW F A+L+D G
Sbjct: 1974 NLTWYKLGSQATSVHMGESLTPVCKNLDALWKLNGTVFSNSTNDILIVAFQNASLQDQGN 2153
Query: 96 YECEVRSLNRSKQK-IINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDED 154
Y C + K+ ++ V G ++ +Q +++CP
Sbjct: 2154 YVCSAQDKKTKKRHCLVKQLVILERMAPMITGNLE-NQTTTIGETIEVVCP------TSG 2312
Query: 155 NINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
N P I W+K+ ++ +ED +VL +G + I V +D G YTC+
Sbjct: 2313 NPTPLITWFKDNET-LVEDSGIVLKDGNRNLTIRRVRKEDGGLYTCQ 2450
>emb|Y16780.1|VMVY16780 variola minor virus complete genome
Length = 186986
Score = 31.6 bits (70), Expect(2) = 0.050
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
Frame = +3
Query: 194 DKGNYTCRMVYTYM----------------GKQYNVSRTMNLEVKESPLKMRPEFIYPNN 237
D G YTC ++Y Y+ K YNV+R + LEV + K+ P +
Sbjct: 165813 DAGYYTCVLIYIYIYIYIYIYIYIYIYIYGSKAYNVTRIVKLEVWD---KIIPSTMQLPK 165983
Query: 238 NTIEVELGSHVVMECNVS 255
+ LGS++ + C VS
Sbjct: 165984 GLV-TSLGSNLTIACKVS 166034
Score = 30.8 bits (68), Expect(2) = 0.050
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 92 DSGLYECEVRSLNRSKQKIINLKVFK-NDNGLCFNGEMKYDQIVKSANAGKIICPDLENF 150
DSG+Y C ++ S ++NL + +++ + + Y QIV + G+ +CP + F
Sbjct: 165532 DSGIYMCITKNETYSDMMLLNLTIVSVSESNIDL---I*YPQIVNERSTGE-MCPSINAF 165699
Query: 151 KDEDNINPEIHW 162
NIN +I W
Sbjct: 165700 -IASNINTDIIW 165732
>dbj|AB007035.1|AB007035 Xenopus laevis mRNA for FGF receptor 3, complete cds
Length = 3261
Score = 43.5 bits (101), Expect = 0.053
Identities = 68/255 (26%), Positives = 98/255 (37%), Gaps = 33/255 (12%)
Frame = +1
Query: 35 VGEPTAISCPVITLPMLHSDYNLT--WYRNGSNMPITTERRARIHQRKGLLWFIPAALED 92
+GE +SC D + T W ++G I R R+GLL I + +D
Sbjct: 130 IGETIELSCAA-------EDASTTTKWCKDG----IGIVPNNRTSTRQGLLKIINVSSDD 276
Query: 93 SGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQ-------------------- 132
SG+Y C L S + + N + D L +G+ + D
Sbjct: 277 SGIYSCR---LWHSTEILRNFTIRVTD--LPSSGDDEDDDDDDDDETEDREPPRWTQPER 441
Query: 133 ------IVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRL---VLAEGEN 183
V +AN + CP N P IHW K K F + R+ L +
Sbjct: 442 MEKKLIAVPAANTIRFRCPAA------GNPTPTIHWLKNGKE-FRGEHRIGGIKLRHQQW 600
Query: 184 AILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRP--EFIYPNNNTIE 241
++++ +V DKGNYTC K ++ +T L+V E RP + P N T
Sbjct: 601 SLVMESVVPSDKGNYTC----VVENKYGSIRQTYQLDVLERS-SHRPILQAGLPGNQT-- 759
Query: 242 VELGSHVVMECNVSS 256
V LGS V C V S
Sbjct: 760 VVLGSDVEFHCKVYS 804
>gb|AF389400.1|AF389400 Danio rerio fibroblast growth factor receptor 1 (fgfr1) mRNA,
complete cds
Length = 2421
Score = 43.5 bits (101), Expect = 0.053
Identities = 50/187 (26%), Positives = 81/187 (42%), Gaps = 22/187 (11%)
Frame = +1
Query: 92 DSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGE----------------MKYDQIVK 135
DSGLY C + LN + + N+ V ++ + + E + D++ K
Sbjct: 265 DSGLYACFAQGLNSNHTEYFNISVTDEEDEVDSSSEEAKLSNDQNLPMAPVWAQPDKMEK 444
Query: 136 SANAGKIICPDLENFKDEDNIN--PEIHWYKECKSGFLEDKRL---VLAEGENAILILNV 190
+A + F+ + N N P + W K K F D+R+ + E I++ +V
Sbjct: 445 KLHA--VPASKTVKFRCQANGNPTPTLKWLKNGKE-FKRDQRIGGFKVREHMWTIIMESV 615
Query: 191 TIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKE-SPLKMRPEFIYPNNNTIEVELGSHVV 249
D+GNYTC + + +++ T L+V E SP + + P N T V GS V
Sbjct: 616 VPSDRGNYTCLV----ENRHGSINHTYQLDVVERSPHRPILQAGLPANRTAVV--GSDVE 777
Query: 250 MECNVSS 256
EC V S
Sbjct: 778 FECKVFS 798
>dbj|AK056544.1|AK056544 Homo sapiens cDNA FLJ31982 fis, clone NT2RP7008550, highly similar
to Mus musculus rig-1 protein mRNA
Length = 3384
Score = 43.5 bits (101), Expect = 0.053
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 1/172 (0%)
Frame = +2
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N V VGEP + C P H + +++W ++G+ + E RI R G L
Sbjct: 689 NVVVAVGEPAVLEC---VPPRGHPEPSVSWRKDGARLK---EEEGRITIRGGKLMMSHTL 850
Query: 90 LEDSGLYECEVRSLNRSKQKII-NLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
D+G+Y C ++ ++ + V + + L +Q+V + +C
Sbjct: 851 KSDAGMYVCVASNMAGERESAAAEVMVLERPSFL----RRPVNQVVLADAPVTFLC---- 1006
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+ + + P + W KE G L R + ++++ I +V+ +D+G YTC
Sbjct: 1007--EVKGDPPPRLRWRKE--DGELPTGRYEI-RSDHSLWIGHVSAEDEGTYTC 1147
>gb|U18339.1|VVU18339 Variola virus Garcia-1966 right near-terminal region
Length = 31562
Score = 31.6 bits (70), Expect(2) = 0.055
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
Frame = +3
Query: 194 DKGNYTCRMVYTYM----------------GKQYNVSRTMNLEVKESPLKMRPEFIYPNN 237
D G YTC ++Y Y+ K YNV+R + LEV + K+ P +
Sbjct: 10389 DAGYYTCVLIYIYIYIYIYIYIYIYIYIYGSKAYNVTRIVKLEVWD---KIIPSTMQLPK 10559
Query: 238 NTIEVELGSHVVMECNVS 255
+ LGS++ + C VS
Sbjct: 10560 GLV-TSLGSNLTIACKVS 10610
Score = 30.8 bits (68), Expect(2) = 0.055
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 92 DSGLYECEVRSLNRSKQKIINLKVFK-NDNGLCFNGEMKYDQIVKSANAGKIICPDLENF 150
DSG+Y C ++ S ++NL + +++ + + Y QIV + G+ +CP + F
Sbjct: 10108 DSGIYMCITKNETYSDMMLLNLTIVSVSESNIDL---I*YPQIVNERSTGE-MCPSINAF 10275
Query: 151 KDEDNINPEIHW 162
NIN +I W
Sbjct: 10276 -IASNINTDIIW 10308
>emb|X72086.1|VMVGEN Variola minor virus complete genome
Length = 20259
Score = 31.6 bits (70), Expect(2) = 0.056
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
Frame = +2
Query: 194 DKGNYTCRMVYTYM----------------GKQYNVSRTMNLEVKESPLKMRPEFIYPNN 237
D G YTC ++Y Y+ K YNV+R + LEV + K+ P +
Sbjct: 10400 DAGYYTCVLIYIYIYIYIYIYIYIYIYIYGSKAYNVTRIVKLEVWD---KIIPSTMQLPK 10570
Query: 238 NTIEVELGSHVVMECNVS 255
+ LGS++ + C VS
Sbjct: 10571 GLV-TSLGSNLTIACKVS 10621
Score = 30.8 bits (68), Expect(2) = 0.056
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +3
Query: 92 DSGLYECEVRSLNRSKQKIINLKVFK-NDNGLCFNGEMKYDQIVKSANAGKIICPDLENF 150
DSG+Y C ++ S ++NL + +++ + + Y QIV + G+ +CP + F
Sbjct: 10119 DSGIYMCITKNETYSDMMLLNLTIVSVSESNIDL---I*YPQIVNERSTGE-MCPSINAF 10286
Query: 151 KDEDNINPEIHW 162
NIN +I W
Sbjct: 10287 -IASNINTDIIW 10319
>gb|U80022.2| Caenorhabditis elegans cosmid F12F3, complete sequence
Length = 36859
Score = 43.1 bits (100), Expect = 0.070
Identities = 50/220 (22%), Positives = 91/220 (40%), Gaps = 21/220 (9%)
Frame = -3
Query: 57 LTWYRNGSNMPITTERRARIHQRKG--LLWFIPAALEDSGLYECEVRS------------ 102
+ W+RN S + + R + G L I A EDSG Y+C ++
Sbjct: 6995 INWFRNESEIEHSQHHRLQFDDGSGNYSLTIIDAYAEDSGEYKCVAKNKIGKAHTVCCVR 6816
Query: 103 ----LNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINP 158
L++ +KI K + F ++ + V ++C +P
Sbjct: 6815 IEELLSKRSKKIDGSKAPR------FRMQLPTPREVPQGADLTLVC------SVSGTPHP 6672
Query: 159 EIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTY-MGKQYNVSRTM 217
I W K+ K + +K++ G + I+ D+G Y C + + + ++V
Sbjct: 6671 NIKWTKDDKPIDMSNKQVRHENGVCTLHIIGARDDDQGRYVCEAENIHGVAQSFSV---- 6504
Query: 218 NLEVKESPLK--MRPEFIYPNNNTIEVELGSHVVMECNVS 255
+E+KE+ K +RP+F+ P N E G+ +V+EC V+
Sbjct: 6503 -VEIKEAVDKDHVRPKFLEPLVNCSTCE-GNEMVLECCVT 6390
Score = 36.6 bits (83), Expect = 6.5
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = -3
Query: 158 PEIHWYKECKSGFLEDKRLVLAE--GENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSR 215
P I WYK+ +E++ L + G + + I+NV + D G YTC V + +GK +
Sbjct: 6377 PTITWYKDGLKLIIENRMLQYTDRKGVSRLNIMNVVMNDDGEYTCEAVNS-LGKDFTHCT 6201
Query: 216 TMNLEVKESPLKMRP 230
+++ S ++ P
Sbjct: 6200 VKVVDMGLSKTRLTP 6156
>ref|NM_072181.1| titin
Length = 8352
Score = 43.1 bits (100), Expect = 0.070
Identities = 50/220 (22%), Positives = 91/220 (40%), Gaps = 21/220 (9%)
Frame = +1
Query: 57 LTWYRNGSNMPITTERRARIHQRKG--LLWFIPAALEDSGLYECEVRS------------ 102
+ W+RN S + + R + G L I A EDSG Y+C ++
Sbjct: 2320 INWFRNESEIEHSQHHRLQFDDGSGNYSLTIIDAYAEDSGEYKCVAKNKIGKAHTVCCVR 2499
Query: 103 ----LNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINP 158
L++ +KI K + F ++ + V ++C +P
Sbjct: 2500 IEELLSKRSKKIDGSKAPR------FRMQLPTPREVPQGADLTLVC------SVSGTPHP 2643
Query: 159 EIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTY-MGKQYNVSRTM 217
I W K+ K + +K++ G + I+ D+G Y C + + + ++V
Sbjct: 2644 NIKWTKDDKPIDMSNKQVRHENGVCTLHIIGARDDDQGRYVCEAENIHGVAQSFSV---- 2811
Query: 218 NLEVKESPLK--MRPEFIYPNNNTIEVELGSHVVMECNVS 255
+E+KE+ K +RP+F+ P N E G+ +V+EC V+
Sbjct: 2812 -VEIKEAVDKDHVRPKFLEPLVNCSTCE-GNEMVLECCVT 2925
Score = 36.6 bits (83), Expect = 6.5
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +1
Query: 158 PEIHWYKECKSGFLEDKRLVLAE--GENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSR 215
P I WYK+ +E++ L + G + + I+NV + D G YTC V + +GK +
Sbjct: 2938 PTITWYKDGLKLIIENRMLQYTDRKGVSRLNIMNVVMNDDGEYTCEAVNS-LGKDFTHCT 3114
Query: 216 TMNLEVKESPLKMRP 230
+++ S ++ P
Sbjct: 3115 VKVVDMGLSKTRLTP 3159
>gb|AY060635.1| Drosophila melanogaster GH05059 full length cDNA
Length = 3902
Score = 43.1 bits (100), Expect = 0.070
Identities = 49/220 (22%), Positives = 76/220 (34%), Gaps = 38/220 (17%)
Frame = +1
Query: 33 VLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALED 92
V + P I CP P H ++W+RNG + AR + L F L D
Sbjct: 2611 VELNRPAVIRCPAGGFPEPH----VSWWRNGQMFGLKNNLMARDYS----LVFNSIQLSD 2766
Query: 93 SGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSA--------------- 137
GLY CEV + R + LK L E ++ A
Sbjct: 2767 LGLYTCEVYNQRRPVSLRVTLKAVGPVRPLSPEEEQYMQYVLNPATRPVTQRPSYPYRPT 2946
Query: 138 ----------NAGKIICPDLENFKDEDNI-----------NPEIHWYKECKSGFLEDKRL 176
N ++ + +N + P + W K+ ++R+
Sbjct: 2947 RPAYVPEPTVNVHAVLALEPKNSYTPGSTIVMSCSVQGYPEPNVTWIKD-DVPLYNNERV 3123
Query: 177 VLAEGENAILILNVTIQDKGNYTCRM--VYTYMGKQYNVS 214
+ + +++ +VT D G YTCR YTY + NVS
Sbjct: 3124 QITYQPHRLVLSDVTSADSGKYTCRASNAYTYANGEANVS 3243
>gb|BC010806.1|BC010806 Mus musculus, Similar to single Ig IL-1R-related protein, clone
MGC:18899 IMAGE:4240425, mRNA, complete cds
Length = 1568
Score = 43.1 bits (100), Expect = 0.070
Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Frame = +3
Query: 358 VYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLY---PKNRESCLYSSDIFALKILP 414
+Y +++++LWY+ + + +++DGK+YDAYV Y P++R+ F IL
Sbjct: 528 LYVKCRLNMLLWYQDTYGEV---EMNDGKLYDAYVSYSDCPEDRK--------FVNFILK 674
Query: 415 EVLERQCGYNLFIFGRNDL-AGEAVIDVTDEKIHQSRRVIIIL 456
LER+ GY LF+ R+ L E D+ + + RR+I++L
Sbjct: 675 PQLERRRGYKLFLEDRDLLPRAEPSADLL-VNLSRCRRLIVVL 800
>emb|Z68328.1|HSU72E5 Human DNA sequence from cosmid cU72E5, between markers DXS366 and
DXS87 on chromosome X
Length = 44443
Score = 42.7 bits (99), Expect = 0.091
Identities = 25/60 (41%), Positives = 35/60 (57%), Gaps = 4/60 (6%)
Frame = +2
Query: 372 SSCHPLLGKKVSDGKIYDAYVLYPKNRESCLY----SSDIFALKILPEVLERQCGYNLFI 427
+S +P + V D K YDAY+ Y K + L + FAL++LP+VLE+ GY LFI
Sbjct: 383 NSYNPFVVLYV*DNKEYDAYLSYTKVDQDTLDCDNPEEEQFALEVLPDVLEKHYGYKLFI 562
>emb|X57790.1|MMFGFRLA M.musculus fibroblast growth factor receptor-like mRNA
Length = 1083
Score = 42.7 bits (99), Expect = 0.091
Identities = 41/127 (32%), Positives = 56/127 (43%), Gaps = 4/127 (3%)
Frame = +1
Query: 134 VKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRL---VLAEGENAILILNV 190
V +A K CP NP + W K K F D R+ + +I++ +V
Sbjct: 496 VPAAKTVKFKCPS------SGTPNPTLRWLKNGKE-FKPDHRIGGYKVRYATWSIIMDSV 654
Query: 191 TIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKE-SPLKMRPEFIYPNNNTIEVELGSHVV 249
DKGNYTC + Y +++ T L+V E SP + P P N T V LGS+V
Sbjct: 655 VPSDKGNYTCIVENEY----GSINHTYQLDVVERSPHRPHPSAGLPANKT--VALGSNVE 816
Query: 250 MECNVSS 256
C V S
Sbjct: 817 FMCKVYS 837
>emb|X99043.1|MMBIG2A M.musculus mRNA for brain-derived immunoglobulin superfamily molecule
BIG-2
Length = 2732
Score = 42.7 bits (99), Expect = 0.091
Identities = 47/206 (22%), Positives = 92/206 (43%), Gaps = 9/206 (4%)
Frame = +2
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W +NG P+ T R +I Q G L L+D+G+ + +V +N
Sbjct: 1364 WVKNGD--PLLTRDRIQIEQ--GTLTITKGNLQDAGMSQ----------------RVGEN 1483
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPE---------IHWYKECKSG 169
+G+ F+ + I +S + + + + K + E ++ +++ +
Sbjct: 1484 KHGVIFSSA-ELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREI 1660
Query: 170 FLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMR 229
E++R+ ++E N + I+NVT D G+YTC + + G S T N+ VK+ M
Sbjct: 1661 LRENERITISEDGN-LRIINVTKSDAGSYTC-IATNHFG---TASSTGNVVVKDPTKVMV 1825
Query: 230 PEFIYPNNNTIEVELGSHVVMECNVS 255
P ++++V +G +V+ C V+
Sbjct: 1826 PP------SSMDVTVGESIVLPCQVT 1885
>ref|NM_010206.1| Mus musculus fibroblast growth factor receptor 1 (Fgfr1), mRNA
Length = 2526
Score = 42.7 bits (99), Expect = 0.091
Identities = 41/127 (32%), Positives = 56/127 (43%), Gaps = 4/127 (3%)
Frame = +1
Query: 134 VKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRL---VLAEGENAILILNV 190
V +A K CP NP + W K K F D R+ + +I++ +V
Sbjct: 559 VPAAKTVKFKCPS------SGTPNPTLRWLKNGKE-FKPDHRIGGYKVRYATWSIIMDSV 717
Query: 191 TIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKE-SPLKMRPEFIYPNNNTIEVELGSHVV 249
DKGNYTC + Y +++ T L+V E SP + P P N T V LGS+V
Sbjct: 718 VPSDKGNYTCIVENEY----GSINHTYQLDVVERSPHRPHPSAGLPANKT--VALGSNVE 879
Query: 250 MECNVSS 256
C V S
Sbjct: 880 FMCKVYS 900
>gb|M28998.1|MUSBFGFR Mouse basic fibroblast growth factor receptor (bFGF-R) mRNA,
complete cds
Length = 2526
Score = 42.7 bits (99), Expect = 0.091
Identities = 41/127 (32%), Positives = 56/127 (43%), Gaps = 4/127 (3%)
Frame = +1
Query: 134 VKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRL---VLAEGENAILILNV 190
V +A K CP NP + W K K F D R+ + +I++ +V
Sbjct: 559 VPAAKTVKFKCPS------SGTPNPTLRWLKNGKE-FKPDHRIGGYKVRYATWSIIMDSV 717
Query: 191 TIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKE-SPLKMRPEFIYPNNNTIEVELGSHVV 249
DKGNYTC + Y +++ T L+V E SP + P P N T V LGS+V
Sbjct: 718 VPSDKGNYTCIVENEY----GSINHTYQLDVVERSPHRPHPSAGLPANKT--VALGSNVE 879
Query: 250 MECNVSS 256
C V S
Sbjct: 880 FMCKVYS 900
>emb|AJ312133.1|DME312133 Drosophila melanogaster mRNA for turtle protein (tutl gene), isoform
2
Length = 2687
Score = 42.7 bits (99), Expect = 0.091
Identities = 62/286 (21%), Positives = 105/286 (36%), Gaps = 4/286 (1%)
Frame = +1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRK-GLLWFIPA 88
N L GE SC +P + + WYR GS + R+ RK G L P
Sbjct: 1495 NQTKLEGEKVIFSCEAKAMP---GNVTVRWYREGSPVREVAALETRVTIRKDGSLIINPI 1665
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
+DSG Y CEV + Q + + F ++Y + AG + C
Sbjct: 1666 KPDDSGQYLCEVTNGIGDPQSASAYLSVEYPAKVTFTPTVQY---LPFRLAGVVQC---- 1824
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
K + + W K+ + + ++ ++L V + +G Y C Y G
Sbjct: 1825 YIKSSPQLQ-YVTWTKDKRLLEPYQMKDIVVMANGSLLFTRVNEEHQGQYAC-TPYNAQG 1998
Query: 209 KQYNVSRTMNLEVKESP-LKMRPEFIYPNNNTIEVELGSHVVMECNV--SSGVYGLLPYW 265
S M++ V++ P + PE +Y + ++G V M C+ + G W
Sbjct: 1999 TA-GASGVMDVLVRKPPAFTVEPETLY------QRKVGDSVEMHCDALEAEGTERPTIKW 2157
Query: 266 QVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAY 311
Q + + E + I +SG I ++ +D+ Y
Sbjct: 2158 QRQEGEQ-----------LTESQRNRIKISGGNITIENLRREDFGY 2262
>emb|AJ312135.1|DME312135 Drosophila melanogaster mRNA for turtle protein (tutl gene), isoform
4
Length = 5099
Score = 42.7 bits (99), Expect = 0.091
Identities = 62/286 (21%), Positives = 105/286 (36%), Gaps = 4/286 (1%)
Frame = +1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRK-GLLWFIPA 88
N L GE SC +P + + WYR GS + R+ RK G L P
Sbjct: 1495 NQTKLEGEKVIFSCEAKAMP---GNVTVRWYREGSPVREVAALETRVTIRKDGSLIINPI 1665
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
+DSG Y CEV + Q + + F ++Y + AG + C
Sbjct: 1666 KPDDSGQYLCEVTNGIGDPQSASAYLSVEYPAKVTFTPTVQY---LPFRLAGVVQC---- 1824
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
K + + W K+ + + ++ ++L V + +G Y C Y G
Sbjct: 1825 YIKSSPQLQ-YVTWTKDKRLLEPYQMKDIVVMANGSLLFTRVNEEHQGQYAC-TPYNAQG 1998
Query: 209 KQYNVSRTMNLEVKESP-LKMRPEFIYPNNNTIEVELGSHVVMECNV--SSGVYGLLPYW 265
S M++ V++ P + PE +Y + ++G V M C+ + G W
Sbjct: 1999 TA-GASGVMDVLVRKPPAFTVEPETLY------QRKVGDSVEMHCDALEAEGTERPTIKW 2157
Query: 266 QVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAY 311
Q + + E + I +SG I ++ +D+ Y
Sbjct: 2158 QRQEGEQ-----------LTESQRNRIKISGGNITIENLRREDFGY 2262
>ref|NM_007518.1| Mus musculus axonal-associated cell adhesion molecule (Axcam), mRNA
Length = 2118
Score = 42.7 bits (99), Expect = 0.091
Identities = 47/206 (22%), Positives = 92/206 (43%), Gaps = 9/206 (4%)
Frame = +1
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W +NG P+ T R +I Q G L L+D+G+ + +V +N
Sbjct: 1045 WVKNGD--PLLTRDRIQIEQ--GTLTITKGNLQDAGMSQ----------------RVGEN 1164
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPE---------IHWYKECKSG 169
+G+ F+ + I +S + + + + K + E ++ +++ +
Sbjct: 1165 KHGVIFSSA-ELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREI 1341
Query: 170 FLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMR 229
E++R+ ++E N + I+NVT D G+YTC + + G S T N+ VK+ M
Sbjct: 1342 LRENERITISEDGN-LRIINVTKSDAGSYTC-IATNHFG---TASSTGNVVVKDPTKVMV 1506
Query: 230 PEFIYPNNNTIEVELGSHVVMECNVS 255
P ++++V +G +V+ C V+
Sbjct: 1507 PP------SSMDVTVGESIVLPCQVT 1566
>dbj|AB041742.1|AB041740S3 Gallus gallus st2 gene, exon 3, 4, 5
Length = 1188
Score = 42.7 bits (99), Expect = 0.091
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 36 GEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERR-ARIHQRKGLLWFIPAALEDSG 94
GE + CP L +TW+ G+ I E +R+ + LWF+P +LEDSG
Sbjct: 137 GEALVVRCPHSVLSA-----KVTWHHTGTRKRIPEEEEGSRVFSKGIFLWFLPTSLEDSG 301
Query: 95 LYECEV 100
Y C +
Sbjct: 302 NYTCVI 319
Score = 36.2 bits (82), Expect = 8.5
Identities = 15/32 (46%), Positives = 21/32 (64%)
Frame = +2
Query: 185 ILILNVTIQDKGNYTCRMVYTYMGKQYNVSRT 216
I I N+ +D G YTC+ YT+ G+ +NVS T
Sbjct: 920 IFIENLNKEDDGYYTCQFTYTHRGRVFNVSAT 1015
>gb|M65053.1|MUSFGFBC Mouse fibroblast growth factor mRNA, complete cds
Length = 2499
Score = 42.7 bits (99), Expect = 0.091
Identities = 41/127 (32%), Positives = 56/127 (43%), Gaps = 4/127 (3%)
Frame = +1
Query: 134 VKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRL---VLAEGENAILILNV 190
V +A K CP NP + W K K F D R+ + +I++ +V
Sbjct: 532 VPAAKTVKFKCPS------SGTPNPTLRWLKNGKE-FKPDHRIGGYKVRYATWSIIMDSV 690
Query: 191 TIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKE-SPLKMRPEFIYPNNNTIEVELGSHVV 249
DKGNYTC + Y +++ T L+V E SP + P P N T V LGS+V
Sbjct: 691 VPSDKGNYTCIVENEY----GSINHTYQLDVVERSPHRPHPSAGLPANKT--VALGSNVE 852
Query: 250 MECNVSS 256
C V S
Sbjct: 853 FMCKVYS 873
>emb|AJ312134.1|DME312134 Drosophila melanogaster mRNA for turtle protein (tutl gene), isoform
3
Length = 4579
Score = 42.7 bits (99), Expect = 0.091
Identities = 62/286 (21%), Positives = 105/286 (36%), Gaps = 4/286 (1%)
Frame = +1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRK-GLLWFIPA 88
N L GE SC +P + + WYR GS + R+ RK G L P
Sbjct: 1495 NQTKLEGEKVIFSCEAKAMP---GNVTVRWYREGSPVREVAALETRVTIRKDGSLIINPI 1665
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
+DSG Y CEV + Q + + F ++Y + AG + C
Sbjct: 1666 KPDDSGQYLCEVTNGIGDPQSASAYLSVEYPAKVTFTPTVQY---LPFRLAGVVQC---- 1824
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
K + + W K+ + + ++ ++L V + +G Y C Y G
Sbjct: 1825 YIKSSPQLQ-YVTWTKDKRLLEPYQMKDIVVMANGSLLFTRVNEEHQGQYAC-TPYNAQG 1998
Query: 209 KQYNVSRTMNLEVKESP-LKMRPEFIYPNNNTIEVELGSHVVMECNV--SSGVYGLLPYW 265
S M++ V++ P + PE +Y + ++G V M C+ + G W
Sbjct: 1999 TA-GASGVMDVLVRKPPAFTVEPETLY------QRKVGDSVEMHCDALEAEGTERPTIKW 2157
Query: 266 QVNDEDVDSFDSTYREQFYEEGMPHGIAVSGTKFNISEVKLKDYAY 311
Q + + E + I +SG I ++ +D+ Y
Sbjct: 2158 QRQEGEQ-----------LTESQRNRIKISGGNITIENLRREDFGY 2262
>ref|NM_010612.1| Mus musculus kinase insert domain protein receptor (Kdr), mRNA
Length = 5391
Score = 42.4 bits (98), Expect = 0.12
Identities = 39/167 (23%), Positives = 64/167 (37%), Gaps = 21/167 (12%)
Frame = +1
Query: 56 NLTWYRNGSNMPIT--TERRARIHQRKGLLW------------------FIPAALEDSGL 95
NLTWY+ GS E + + LW F A+L+D G
Sbjct: 1939 NLTWYKLGSQATSVHMGESLTPVCKNLDALWKLNGTMFSNSTNDILIVAFQNASLQDQGD 2118
Query: 96 YECEVRSLNRSKQK-IINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDED 154
Y C + K+ ++ + G ++ +Q ++ CP
Sbjct: 2119 YVCSAQDKKTKKRHCLVKQLIILERMAPMITGNLE-NQTTTIGETIEVTCP------ASG 2277
Query: 155 NINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
N P I W+K+ ++ +ED +VL +G + I V +D G YTC+
Sbjct: 2278 NPTPHITWFKDNET-LVEDSGIVLRDGNRNLTIRRVRKEDGGLYTCQ 2415
>emb|X59397.1|MMFLK1 Mouse Flk-1 mRNA for a tyrosine kinase receptor
Length = 5391
Score = 42.4 bits (98), Expect = 0.12
Identities = 39/167 (23%), Positives = 64/167 (37%), Gaps = 21/167 (12%)
Frame = +1
Query: 56 NLTWYRNGSNMPIT--TERRARIHQRKGLLW------------------FIPAALEDSGL 95
NLTWY+ GS E + + LW F A+L+D G
Sbjct: 1939 NLTWYKLGSQATSVHMGESLTPVCKNLDALWKLNGTMFSNSTNDILIVAFQNASLQDQGD 2118
Query: 96 YECEVRSLNRSKQK-IINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDED 154
Y C + K+ ++ + G ++ +Q ++ CP
Sbjct: 2119 YVCSAQDKKTKKRHCLVKQLIILERMAPMITGNLE-NQTTTIGETIEVTCP------ASG 2277
Query: 155 NINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
N P I W+K+ ++ +ED +VL +G + I V +D G YTC+
Sbjct: 2278 NPTPHITWFKDNET-LVEDSGIVLRDGNRNLTIRRVRKEDGGLYTCQ 2415
>gb|BC020530.1|BC020530 Mus musculus, kinase insert domain protein receptor, clone MGC:18600
IMAGE:4238984, mRNA, complete cds
Length = 5464
Score = 42.4 bits (98), Expect = 0.12
Identities = 39/167 (23%), Positives = 64/167 (37%), Gaps = 21/167 (12%)
Frame = +3
Query: 56 NLTWYRNGSNMPIT--TERRARIHQRKGLLW------------------FIPAALEDSGL 95
NLTWY+ GS E + + LW F A+L+D G
Sbjct: 1992 NLTWYKLGSQATSVHMGESLTPVCKNLDALWKLNGTMFSNSTNDILIVAFQNASLQDQGD 2171
Query: 96 YECEVRSLNRSKQK-IINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDED 154
Y C + K+ ++ + G ++ +Q ++ CP
Sbjct: 2172 YVCSAQDKKTKKRHCLVKQLIILERMAPMITGNLE-NQTTTIGETIEVTCP------ASG 2330
Query: 155 NINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
N P I W+K+ ++ +ED +VL +G + I V +D G YTC+
Sbjct: 2331 NPTPHITWFKDNET-LVEDSGIVLRDGNRNLTIRRVRKEDGGLYTCQ 2468
>ref|NM_053746.1| Rattus norvegicus contactin 5 (Cntn5), mRNA
Length = 3341
Score = 42.4 bits (98), Expect = 0.12
Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 1/216 (0%)
Frame = +1
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W +NG+ P+ + +R+ G+L D+G+Y+C + + LK+ +
Sbjct: 1288 WLKNGA--PLLPQ--SRVDTANGVLAIHSVNQSDAGMYQCLAENKYGAIYASAELKILAS 1455
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
N ++K IV I C K + + P I W K K+ + +L
Sbjct: 1456 PPSFELN-QVKKSIIVTKDREVLIEC------KPQGSPKPAISWRKGDKAVRGNKRIAIL 1614
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN 238
+G ++ ILN + D+G Y C+ V + + S + VKE P I
Sbjct: 1615 PDG--SLRILNASKADEGKYICQGVNIFGSAEIIAS----VSVKE------PTRIELTPK 1758
Query: 239 TIEVELGSHVVMECN-VSSGVYGLLPYWQVNDEDVD 273
E+ +G +V+ C + + YW + + +D
Sbjct: 1759 RTELTVGESIVLNCKAMHDSSLDVTFYWTLKGQPID 1866
>dbj|D87212.1|D87212 Rattus norvegicus mRNA for NB-2, complete cds
Length = 3341
Score = 42.4 bits (98), Expect = 0.12
Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 1/216 (0%)
Frame = +1
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W +NG+ P+ + +R+ G+L D+G+Y+C + + LK+ +
Sbjct: 1288 WLKNGA--PLLPQ--SRVDTANGVLAIHSVNQSDAGMYQCLAENKYGAIYASAELKILAS 1455
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
N ++K IV I C K + + P I W K K+ + +L
Sbjct: 1456 PPSFELN-QVKKSIIVTKDREVLIEC------KPQGSPKPAISWRKGDKAVRGNKRIAIL 1614
Query: 179 AEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNN 238
+G ++ ILN + D+G Y C+ V + + S + VKE P I
Sbjct: 1615 PDG--SLRILNASKADEGKYICQGVNIFGSAEIIAS----VSVKE------PTRIELTPK 1758
Query: 239 TIEVELGSHVVMECN-VSSGVYGLLPYWQVNDEDVD 273
E+ +G +V+ C + + YW + + +D
Sbjct: 1759 RTELTVGESIVLNCKAMHDSSLDVTFYWTLKGQPID 1866
>gb|AF388035.1|AF388035 Xenopus laevis membrane protein CDO (CDO) mRNA, complete cds
Length = 4435
Score = 42.4 bits (98), Expect = 0.12
Identities = 30/123 (24%), Positives = 57/123 (45%), Gaps = 4/123 (3%)
Frame = +2
Query: 157 NPEIHWYKECKSGFLE---DKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNV 213
NP+ H + + +L+ DK L+L G + ILNV+++D+G Y C
Sbjct: 719 NPKAHVRYKVRGKWLKESSDKYLILPSGN--LHILNVSVEDRGTYRCAAYNPVTHDLKLS 892
Query: 214 SRTMNLEVKESPLKMRPEFIYP-NNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDV 272
+ T+ L V SP ++ ++P + + V++ + +EC V G YW ++
Sbjct: 893 TSTLKLSVNRSP-RVDSRILHPVTSQAVLVQIHDPLTLECVVGGGPSHPPVYWYKGGQEA 1069
Query: 273 DSF 275
++
Sbjct: 1070AAY 1078
>emb|X70842.1|MMFLK1M M.musculus Flk-1 mRNA
Length = 5470
Score = 42.4 bits (98), Expect = 0.12
Identities = 39/167 (23%), Positives = 64/167 (37%), Gaps = 21/167 (12%)
Frame = +1
Query: 56 NLTWYRNGSNMPIT--TERRARIHQRKGLLW------------------FIPAALEDSGL 95
NLTWY+ GS E + + LW F A+L+D G
Sbjct: 2017 NLTWYKLGSQATSVHMGESLTPVCKNLDALWKLNGTMFSNSTNDILIVAFQNASLQDQGD 2196
Query: 96 YECEVRSLNRSKQK-IINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDED 154
Y C + K+ ++ + G ++ +Q ++ CP
Sbjct: 2197 YVCSAQDKKTKKRHCLVKQLIILERMAPMITGNLE-NQTTTIGETIEVTCP------ASG 2355
Query: 155 NINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
N P I W+K+ ++ +ED +VL +G + I V +D G YTC+
Sbjct: 2356 NPTPHITWFKDNET-LVEDSGIVLRDGNRNLTIRRVRKEDGGLYTCQ 2493
>gb|AY075492.1| Drosophila melanogaster RE47547 full length cDNA
Length = 1597
Score = 42.4 bits (98), Expect = 0.12
Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Frame = +3
Query: 141 KIICPDLENFKDEDNINP-EIHWY-KECKS------GFLEDKRLVLAEGENA---ILILN 189
K+ C +L+ DE +N +IHWY K+C G +++ + E + + N
Sbjct: 525 KLQC-NLKGLVDESMLNDIKIHWYFKQCSENNCHQLGSVDEWTALPCEPSLCRPELWLRN 701
Query: 190 VTIQDKGNYTCRMVYTYMGKQYNVS----RTMNLEVKESPLKMRPEFI--YPNNNTIEVE 243
VT + G Y C + K V RT L+VK + L PEF+ YPNN T V
Sbjct: 702 VTERYSGLYKCSINPHIWDKAQAVDVQLVRTYQLDVKNTSLAA-PEFVDSYPNNKTTLV- 875
Query: 244 LGSHVVMECNVSS 256
GS VV +C V S
Sbjct: 876 -GSRVVFQCRVHS 911
>ref|NM_004540.1| Homo sapiens neural cell adhesion molecule 2 (NCAM2), mRNA
Length = 4723
Score = 42.4 bits (98), Expect = 0.12
Identities = 41/171 (23%), Positives = 75/171 (42%), Gaps = 5/171 (2%)
Frame = +1
Query: 35 VGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGL---LWFIPAALE 91
VGE +C I P ++ WY I+T+R + Q+ G+ L A +E
Sbjct: 169 VGESKFFTCTAIGEPR-----SIDWYNPQGEKIISTQRV--VVQKGGVRSRLTIYNANIE 327
Query: 92 DSGLYECEVRSLN-RSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENF 150
D+G+Y C+ ++++ + L++++ L F E+ Q K +++C
Sbjct: 328 DAGIYRCQATDAKGQTQEATVVLEIYQK---LTFR-EVVSPQEFKQGEDAEVVC------ 477
Query: 151 KDEDNINPEIHW-YKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+ + P + W Y + + D RL + N + ILN+ D+G Y C
Sbjct: 478 RVSSSPAPAVSWLYHNEEVTTISDNRLAMLANNN-LQILNINKSDEGIYRC 627
>gb|U75330.1|HSU75330 Human neural cell adhesion protein (NCAM21) mRNA, complete cds
Length = 4723
Score = 42.4 bits (98), Expect = 0.12
Identities = 41/171 (23%), Positives = 75/171 (42%), Gaps = 5/171 (2%)
Frame = +1
Query: 35 VGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGL---LWFIPAALE 91
VGE +C I P ++ WY I+T+R + Q+ G+ L A +E
Sbjct: 169 VGESKFFTCTAIGEPR-----SIDWYNPQGEKIISTQRV--VVQKGGVRSRLTIYNANIE 327
Query: 92 DSGLYECEVRSLN-RSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENF 150
D+G+Y C+ ++++ + L++++ L F E+ Q K +++C
Sbjct: 328 DAGIYRCQATDAKGQTQEATVVLEIYQK---LTFR-EVVSPQEFKQGEDAEVVC------ 477
Query: 151 KDEDNINPEIHW-YKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+ + P + W Y + + D RL + N + ILN+ D+G Y C
Sbjct: 478 RVSSSPAPAVSWLYHNEEVTTISDNRLAMLANNN-LQILNINKSDEGIYRC 627
>ref|NM_008377.1| Mus musculus integral membrane glycoprotein (Img), mRNA
Length = 4822
Score = 42.0 bits (97), Expect = 0.16
Identities = 35/152 (23%), Positives = 60/152 (39%), Gaps = 1/152 (0%)
Frame = +1
Query: 52 HSDYNLTWYRNG-SNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKI 110
H + + W ++G ++ P ERR + + + ++D G+Y C ++ S
Sbjct: 2332 HPNPQIAWQKDGGTDFPAARERRMHVMPDDDVFFITDVKIDDMGVYSCTAQNSAGSVSAN 2511
Query: 111 INLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGF 170
L V + + L E D++V C K + P I W K +
Sbjct: 2512 ATLTVLETPS-LAVPLE---DRVVTVGETVAFQC------KATGSPTPRITWLKGGRPLS 2661
Query: 171 LEDKRLVLAEGENAILILNVTIQDKGNYTCRM 202
L ++ G +++ NV I D G YTC M
Sbjct: 2662 LTERHH-FTPGNQLLVVQNVMIDDAGRYTCEM 2754
>dbj|D78572.1|D78572 Mus musculus mRNA for membrane glycoprotein, complete cds
Length = 4822
Score = 42.0 bits (97), Expect = 0.16
Identities = 35/152 (23%), Positives = 60/152 (39%), Gaps = 1/152 (0%)
Frame = +1
Query: 52 HSDYNLTWYRNG-SNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKI 110
H + + W ++G ++ P ERR + + + ++D G+Y C ++ S
Sbjct: 2332 HPNPQIAWQKDGGTDFPAARERRMHVMPDDDVFFITDVKIDDMGVYSCTAQNSAGSVSAN 2511
Query: 111 INLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGF 170
L V + + L E D++V C K + P I W K +
Sbjct: 2512 ATLTVLETPS-LAVPLE---DRVVTVGETVAFQC------KATGSPTPRITWLKGGRPLS 2661
Query: 171 LEDKRLVLAEGENAILILNVTIQDKGNYTCRM 202
L ++ G +++ NV I D G YTC M
Sbjct: 2662 LTERHH-FTPGNQLLVVQNVMIDDAGRYTCEM 2754
>ref|NM_003319.1| Homo sapiens titin (TTN), mRNA
Length = 81940
Score = 41.6 bits (96), Expect = 0.20
Identities = 46/188 (24%), Positives = 79/188 (41%), Gaps = 1/188 (0%)
Frame = +1
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLEN 149
L+D Y CEVR+ S L V + + F + + V + K++C
Sbjct: 17950 LDDEAEYSCEVRTARTSGM----LTVLEEE--AVFTKNLANIE-VSETDTIKLVC----- 18093
Query: 150 FKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILIL-NVTIQDKGNYTCRMVYTYMG 208
+ E+ WYK + + +L EG IL++ N ++D GNY CR+
Sbjct: 18094 --EVSKPGAEVIWYKGDEEIIETGRYEILTEGRKRILVIQNAHLEDAGNYNCRL------ 18249
Query: 209 KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVN 268
SRT + K ++ EFI N +E+ G C++S + + W+ +
Sbjct: 18250 ---PSSRT---DGKVKVHELAAEFISKPQN-LEILEGEKAEFVCSISKESFPV--QWKRD 18402
Query: 269 DEDVDSFD 276
D+ ++S D
Sbjct: 18403 DKTLESGD 18426
Score = 38.9 bits (89), Expect = 1.3
Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 1/221 (0%)
Frame = +1
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
WY+ + T RK +L A LED+G Y C + S KV +
Sbjct: 18124 WYKGDEEIIETGRYEILTEGRKRILVIQNAHLEDAGNYNCRLPSSRTDG------KVKVH 18285
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
+ F + + +I++ A + E+F + W ++ K+ DK V+
Sbjct: 18286 ELAAEFISKPQNLEILEGEKAEFVCSISKESF--------PVQWKRDDKTLESGDKYDVI 18441
Query: 179 AEGENAILIL-NVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNN 237
A+G+ +L++ + T+QD G Y + V + + V PLK
Sbjct: 18442 ADGKKRVLVVKDATLQDMGTYVVMVGAARAAAHLTVIEKLRIVV---PLK---------- 18582
Query: 238 NTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVDSFDST 278
V+ VV C V++ G W N+E + FDS+
Sbjct: 18583 -DTRVKEQQEVVFNCEVNT--EGAKAKWFRNEEAI--FDSS 18690
>emb|X90568.1|HSTITIN2B H.sapiens mRNA for titin protein (clone hh1-hh54)
Length = 81940
Score = 41.6 bits (96), Expect = 0.20
Identities = 46/188 (24%), Positives = 79/188 (41%), Gaps = 1/188 (0%)
Frame = +1
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLEN 149
L+D Y CEVR+ S L V + + F + + V + K++C
Sbjct: 17950 LDDEAEYSCEVRTARTSGM----LTVLEEE--AVFTKNLANIE-VSETDTIKLVC----- 18093
Query: 150 FKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILIL-NVTIQDKGNYTCRMVYTYMG 208
+ E+ WYK + + +L EG IL++ N ++D GNY CR+
Sbjct: 18094 --EVSKPGAEVIWYKGDEEIIETGRYEILTEGRKRILVIQNAHLEDAGNYNCRL------ 18249
Query: 209 KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVN 268
SRT + K ++ EFI N +E+ G C++S + + W+ +
Sbjct: 18250 ---PSSRT---DGKVKVHELAAEFISKPQN-LEILEGEKAEFVCSISKESFPV--QWKRD 18402
Query: 269 DEDVDSFD 276
D+ ++S D
Sbjct: 18403 DKTLESGD 18426
Score = 38.9 bits (89), Expect = 1.3
Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 1/221 (0%)
Frame = +1
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
WY+ + T RK +L A LED+G Y C + S KV +
Sbjct: 18124 WYKGDEEIIETGRYEILTEGRKRILVIQNAHLEDAGNYNCRLPSSRTDG------KVKVH 18285
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
+ F + + +I++ A + E+F + W ++ K+ DK V+
Sbjct: 18286 ELAAEFISKPQNLEILEGEKAEFVCSISKESF--------PVQWKRDDKTLESGDKYDVI 18441
Query: 179 AEGENAILIL-NVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNN 237
A+G+ +L++ + T+QD G Y + V + + V PLK
Sbjct: 18442 ADGKKRVLVVKDATLQDMGTYVVMVGAARAAAHLTVIEKLRIVV---PLK---------- 18582
Query: 238 NTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVDSFDST 278
V+ VV C V++ G W N+E + FDS+
Sbjct: 18583 -DTRVKEQQEVVFNCEVNT--EGAKAKWFRNEEAI--FDSS 18690
>gb|AF461120.1|AF461120 Danio rerio brother of CDO (boc) mRNA, complete cds
Length = 3373
Score = 41.6 bits (96), Expect = 0.20
Identities = 49/231 (21%), Positives = 91/231 (39%), Gaps = 3/231 (1%)
Frame = +3
Query: 51 LHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYEC-EVRSLNRSKQK 109
L + N++W+ NG +P + + R G L+ G Y+C S+
Sbjct: 420 LPNHVNISWHLNGRELPAGGDEELGVLVRPGSLYIPSLTNLTVGRYQCVATTSVGSCASV 599
Query: 110 IINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIIC--PDLENFKDEDNINPEIHWYKECK 167
N+ K + F + + + V N I C P+ + K + + + W + K
Sbjct: 600 PANVTAAKLRD---FEPDDQQEIEVDEGNTAVIECHLPESQP-KAQVRYSVKQEWLETSK 767
Query: 168 SGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLK 227
+ L++ G + I N T D+G Y C + + T L ++ S +
Sbjct: 768 GNY-----LIMPSGN--LQIANATRDDEGPYICAAYNPVTQEIKTSTSTDRLRIRRSTSE 926
Query: 228 MRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVDSFDST 278
P + +I V G +V+EC V+SG+ W + D+ + ++T
Sbjct: 927 AARIIYPPASRSIMVNKGQRLVLEC-VASGIPTPQVTWAKDGLDLRNHNNT 1076
>emb|X65224.1|GGNEUFASC G.gallus mRNA for neurofascin
Length = 4041
Score = 41.6 bits (96), Expect = 0.20
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 1/163 (0%)
Frame = +1
Query: 39 TAISCPVITLPMLHSDYNLTWYRNGS-NMPITTERRARIHQRKGLLWFIPAALEDSGLYE 97
T + CP P+ L W++NG NM +A G L A ED G+Y
Sbjct: 1504 TRLDCPFFGSPIP----TLRWFKNGQGNMLDGGNYKAH---ENGSLEMSMARKEDQGIYT 1662
Query: 98 CEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNIN 157
C ++ + + L+V K+ + E DQ+VK + ++ C K + +
Sbjct: 1663 CVATNILGKVEAQVRLEV-KDPTRIVRGPE---DQVVKRGSMPRLHC----RVKHDPTLK 1818
Query: 158 PEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+ W K+ ++ ++ + + ++ + I V +D+G+YTC
Sbjct: 1819 LTVTWLKDDAPLYIGNR---MKKEDDGLTIYGVAEKDQGDYTC 1938
>ref|NM_069872.1| Fibronectin type III domain (31 domains), IG (immunoglobulin)
superfamily (18 domains), calcium/calmodulin dependent
protein kinase
Length = 20496
Score = 41.6 bits (96), Expect = 0.20
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Frame = +1
Query: 157 NPEIHWYKECK---SGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNV 213
N +I WYK+ K SG L+ K +V+ + ++I N + D G YTC + V
Sbjct: 2485 NAKIRWYKDRKEIFSGGLKYK-IVIEKNVCTLIINNPEVDDTGKYTC--------EANGV 2637
Query: 214 SRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSS 256
L V E P+K F+ P NT E+ V+ C V++
Sbjct: 2638 PTHAQLTVLEPPMKY--SFLNPLPNTQEIYRTKQAVLTCKVNT 2760
Score = 38.1 bits (87), Expect = 2.2
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +1
Query: 158 PEIHWYKECKSGFLEDKRLVLAEGENAILILN-VTIQDKGNYTCRMVYTYMGKQYNVSRT 216
PE W+K CK K ++ +G+ +LI+N +T D YTCR S
Sbjct: 16873 PEYRWFKGCKELVDTSKYTLINKGDKQVLIINDLTSDDADEYTCRAT----NSSGTRSTR 17040
Query: 217 MNLEVKESP 225
NL +K P
Sbjct: 17041 ANLRIKTKP 17067
>gb|AC084594.1|CBRG42E21 Caenorhabditis briggsae cosmid G42E21, complete sequence
Length = 39130
Score = 41.6 bits (96), Expect = 0.20
Identities = 43/214 (20%), Positives = 89/214 (41%), Gaps = 15/214 (7%)
Frame = -2
Query: 57 LTWYRNGSNMPITTERRARIHQRKG--LLWFIPAALEDSGLYECEVRSLNRSKQKIINLK 114
+ W+RN + + + R + G L I A EDSG Y+C ++ + ++
Sbjct: 23868 INWFRNEAEIEHSQRHRLQFDDGSGNYSLTIIDAYAEDSGEYKCVAKNKIGKAHTVCCVR 23689
Query: 115 V----------FKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYK 164
+ F ++ + V + ++C +P I W K
Sbjct: 23688 IEELLAKRSKKIDGSKAPRFRMQLPTPREVPQGSDLTLVC------SVSGTPHPNIRWTK 23527
Query: 165 ECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTY-MGKQYNVSRTMNLEVKE 223
+ + + +K++ G + I+ +D+G Y C + + + ++V +E+KE
Sbjct: 23526 DDQPIDMSNKQVRHENGVCTLHIIGARDEDQGRYVCEAENIHGVAQSFSV-----VEIKE 23362
Query: 224 SPLK--MRPEFIYPNNNTIEVELGSHVVMECNVS 255
+ K ++P+F+ P N E G+ +V+EC V+
Sbjct: 23361 AVDKDHIKPKFLEPLVNCSTCE-GNEIVLECCVT 23263
Score = 37.7 bits (86), Expect = 2.9
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 19/175 (10%)
Frame = -2
Query: 56 NLTWYRNGSNMPITTERRARIHQRKGL--LWFIPAALEDSGLYECEVRSLNRSKQK--II 111
N+ W ++ + PI + ++ G+ L I A ED G Y CE +++ Q ++
Sbjct: 23544 NIRWTKD--DQPIDMSNK-QVRHENGVCTLHIIGARDEDQGRYVCEAENIHGVAQSFSVV 23374
Query: 112 NLKVFKNDNGL-------------CFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINP 158
+K + + + C E+ +++ GK I P
Sbjct: 23373 EIKEAVDKDHIKPKFLEPLVNCSTCEGNEI----VLECCVTGKPI--------------P 23248
Query: 159 EIHWYKECKSGFLEDKRLVLAE--GENAILILNVTIQDKGNYTCRMVYTYMGKQY 211
I WYK+ +E++ L + G + + I+NV + D G YTC V T +GK +
Sbjct: 23247 AITWYKDGLKLIIENRMLQYTDRKGVSRLNIMNVVMDDAGEYTCEAVNT-LGKDF 23086
>ref|NM_069873.1| Fibronectin type III domain (31 domains), IG (immunoglobulin)
superfamily (18 domains), calcium/calmodulin dependent
protein kinase
Length = 21483
Score = 41.6 bits (96), Expect = 0.20
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Frame = +1
Query: 157 NPEIHWYKECK---SGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNV 213
N +I WYK+ K SG L+ K +V+ + ++I N + D G YTC + V
Sbjct: 3472 NAKIRWYKDRKEIFSGGLKYK-IVIEKNVCTLIINNPEVDDTGKYTC--------EANGV 3624
Query: 214 SRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSS 256
L V E P+K F+ P NT E+ V+ C V++
Sbjct: 3625 PTHAQLTVLEPPMKY--SFLNPLPNTQEIYRTKQAVLTCKVNT 3747
Score = 38.1 bits (87), Expect = 2.2
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +1
Query: 158 PEIHWYKECKSGFLEDKRLVLAEGENAILILN-VTIQDKGNYTCRMVYTYMGKQYNVSRT 216
PE W+K CK K ++ +G+ +LI+N +T D YTCR S
Sbjct: 17860 PEYRWFKGCKELVDTSKYTLINKGDKQVLIINDLTSDDADEYTCRAT----NSSGTRSTR 18027
Query: 217 MNLEVKESP 225
NL +K P
Sbjct: 18028 ANLRIKTKP 18054
>ref|NM_016952.1| Homo sapiens cell adhesion molecule-related/down-regulated by
oncogenes (CDON), mRNA
Length = 3986
Score = 41.6 bits (96), Expect = 0.20
Identities = 62/246 (25%), Positives = 99/246 (40%), Gaps = 8/246 (3%)
Frame = +1
Query: 35 VGEPTAISC---PVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALE 91
+G P + C PV T ++W NG + E +IHQ G L +
Sbjct: 52 LGGPVVLHCSAQPVTT--------RISWLHNGKTLDGNLEH-IKIHQ--GTLTILSLNSS 198
Query: 92 DSGLYECEVRSLNRSKQKIINLKVFKNDNGLC-FNGEMKYDQIVKSANAGKIICPDLENF 150
G Y+C N S I++ + L F K+ + +AG I C E+
Sbjct: 199 LLGYYQCLA---NNSIGAIVSGPATVSVAVLGDFGSSTKHVITAEEKSAGFIGCRVPES- 366
Query: 151 KDEDNINPEIHWYKECKSGFLE---DKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYM 207
NP+ + + +LE + L+L G + ILNV+++DKG+Y C Y +
Sbjct: 367 ------NPKAEVRYKIRGKWLEHSTENYLILPSGN--LQILNVSLEDKGSYKC-AAYNPV 519
Query: 208 GKQYNVSRTMNLEVKESPLKMRPEFIYP-NNNTIEVELGSHVVMECNVSSGVYGLLPYWQ 266
Q V + P ++P ++ + V S V +EC V SGV YW
Sbjct: 520 THQLKVEPIGRKLLVSRPSSDDVHILHPTHSQALAVLSRSPVTLEC-VVSGVPAPQVYWL 696
Query: 267 VNDEDV 272
+ +D+
Sbjct: 697 KDGQDI 714
>gb|AF004841.1|AF004841 Homo sapiens CDO mRNA, complete cds
Length = 3986
Score = 41.6 bits (96), Expect = 0.20
Identities = 62/246 (25%), Positives = 99/246 (40%), Gaps = 8/246 (3%)
Frame = +1
Query: 35 VGEPTAISC---PVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALE 91
+G P + C PV T ++W NG + E +IHQ G L +
Sbjct: 52 LGGPVVLHCSAQPVTT--------RISWLHNGKTLDGNLEH-IKIHQ--GTLTILSLNSS 198
Query: 92 DSGLYECEVRSLNRSKQKIINLKVFKNDNGLC-FNGEMKYDQIVKSANAGKIICPDLENF 150
G Y+C N S I++ + L F K+ + +AG I C E+
Sbjct: 199 LLGYYQCLA---NNSIGAIVSGPATVSVAVLGDFGSSTKHVITAEEKSAGFIGCRVPES- 366
Query: 151 KDEDNINPEIHWYKECKSGFLE---DKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYM 207
NP+ + + +LE + L+L G + ILNV+++DKG+Y C Y +
Sbjct: 367 ------NPKAEVRYKIRGKWLEHSTENYLILPSGN--LQILNVSLEDKGSYKC-AAYNPV 519
Query: 208 GKQYNVSRTMNLEVKESPLKMRPEFIYP-NNNTIEVELGSHVVMECNVSSGVYGLLPYWQ 266
Q V + P ++P ++ + V S V +EC V SGV YW
Sbjct: 520 THQLKVEPIGRKLLVSRPSSDDVHILHPTHSQALAVLSRSPVTLEC-VVSGVPAPQVYWL 696
Query: 267 VNDEDV 272
+ +D+
Sbjct: 697 KDGQDI 714
>gb|S53103.1|S53103 NYK/FLK-1= platelet-derived growth factor receptor-related tyrosine
kinase [mice, E10 embryonic neuroepithelium, mRNA, 4790
nt]
Length = 4790
Score = 41.6 bits (96), Expect = 0.20
Identities = 39/167 (23%), Positives = 64/167 (37%), Gaps = 21/167 (12%)
Frame = +2
Query: 56 NLTWYRNGSNMPIT--TERRARIHQRKGLLW------------------FIPAALEDSGL 95
NLTWY+ GS E + + LW F A+L+D G
Sbjct: 2003 NLTWYKLGSQATSVHMGESLTPVCKNLDALWKLNGTMFSNSTNDILIVAFQNASLQDQGD 2182
Query: 96 YECEVRSLNRSKQK-IINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDED 154
Y C + K+ ++ + G ++ +Q ++ CP
Sbjct: 2183 YVCSAQDKKTKKRHCLVKQLIILERMAPMITGNLE-NQTTTIDETIEVTCP------ASG 2341
Query: 155 NINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
N P I W+K+ ++ +ED +VL +G + I V +D G YTC+
Sbjct: 2342 NPTPHITWFKDNET-LVEDSGIVLRDGNRNLTIRRVRKEDGGLYTCQ 2479
>ref|XM_009705.5| Homo sapiens neural cell adhesion molecule 2 (NCAM2), mRNA
Length = 4597
Score = 41.6 bits (96), Expect = 0.20
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 5/171 (2%)
Frame = +2
Query: 35 VGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGL---LWFIPAALE 91
VGE +C I P ++ WY I+T+R + Q++G+ L A +E
Sbjct: 47 VGESKFFTCTAIGEPE-----SIDWYNPQGEKIISTQRV--VVQKEGVRSRLTIYNANIE 205
Query: 92 DSGLYECEVR-SLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENF 150
D+G+Y C+ + ++++ + L++++ L F E+ Q K +++C
Sbjct: 206 DAGIYRCQATDAKGQTQEATVVLEIYQK---LTFR-EVVSPQEFKQGEDAEVVC------ 355
Query: 151 KDEDNINPEIHW-YKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+ + P + W Y + + D R + N + ILN+ D+G Y C
Sbjct: 356 RVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNN-LQILNINKSDEGIYRC 505
>ref|XM_038278.4| Homo sapiens titin (TTN), mRNA
Length = 81755
Score = 41.6 bits (96), Expect = 0.20
Identities = 46/188 (24%), Positives = 79/188 (41%), Gaps = 1/188 (0%)
Frame = +3
Query: 90 LEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLEN 149
L+D Y CEVR+ S L V + + F + + V + K++C
Sbjct: 17775 LDDEAEYSCEVRTARTSGM----LTVLEEE--AVFTKNLANIE-VSETDTIKLVC----- 17918
Query: 150 FKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILIL-NVTIQDKGNYTCRMVYTYMG 208
+ E+ WYK + + +L EG IL++ N ++D GNY CR+
Sbjct: 17919 --EVSKPGAEVIWYKGDEEIIETGRYEILTEGRKRILVIQNAHLEDAGNYNCRL------ 18074
Query: 209 KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVN 268
SRT + K ++ EFI N +E+ G C++S + + W+ +
Sbjct: 18075 ---PSSRT---DGKVKVHELAAEFISKPQN-LEILEGEKAEFVCSISKESFPV--QWKRD 18227
Query: 269 DEDVDSFD 276
D+ ++S D
Sbjct: 18228 DKTLESGD 18251
Score = 38.9 bits (89), Expect = 1.3
Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 1/221 (0%)
Frame = +3
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
WY+ + T RK +L A LED+G Y C + S KV +
Sbjct: 17949 WYKGDEEIIETGRYEILTEGRKRILVIQNAHLEDAGNYNCRLPSSRTDG------KVKVH 18110
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
+ F + + +I++ A + E+F + W ++ K+ DK V+
Sbjct: 18111 ELAAEFISKPQNLEILEGEKAEFVCSISKESF--------PVQWKRDDKTLESGDKYDVI 18266
Query: 179 AEGENAILIL-NVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNN 237
A+G+ +L++ + T+QD G Y + V + + V PLK
Sbjct: 18267 ADGKKRVLVVKDATLQDMGTYVVMVGAARAAAHLTVIEKLRIVV---PLK---------- 18407
Query: 238 NTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVDSFDST 278
V+ VV C V++ G W N+E + FDS+
Sbjct: 18408 -DTRVKEQQEVVFNCEVNT--EGAKAKWFRNEEAI--FDSS 18515
>ref|NM_008664.1| Mus musculus myomesin 2 (Myom2), mRNA
Length = 5074
Score = 41.2 bits (95), Expect = 0.27
Identities = 41/180 (22%), Positives = 73/180 (39%), Gaps = 19/180 (10%)
Frame = +3
Query: 54 DYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINL 113
+ ++WY + + + R + L +D G Y E+ S Q+ ++L
Sbjct: 3873 EMKVSWYHKEAKISSSEHMRIGGSEEMAWLQICEPTEKDKGKYTFEIFDGKDSHQRSLDL 4052
Query: 114 KVFKNDNGLCFNGEMKYDQIVKSA-----NAGKII--CPDLENFKDEDNIN--------- 157
+G F+ Q +K+A N GK+I PD+ + +N
Sbjct: 4053 ------SGQAFDEAYAEFQQLKAAAFAEKNRGKVIGGLPDVVTIMEGKTLNLTCTVFGNP 4214
Query: 158 -PEIHWYKECKSGFLEDKRLVLAEGEN--AILILNVTIQDKGNYTCRMVYTYMGKQYNVS 214
PE+ W+K K L + LV E ++ I VT +D G Y+ + Y G++ +V+
Sbjct: 4215 DPEVVWFKNDKDIELSEHFLVKMEQSKYVSLTIQGVTAEDSGKYSINVKNKYGGEKIDVT 4394
>ref|NM_021339.1| Mus musculus cell adhesion molecule-related/down-regulated by
oncogenes (Cdon), mRNA
Length = 3914
Score = 41.2 bits (95), Expect = 0.27
Identities = 57/240 (23%), Positives = 93/240 (38%), Gaps = 3/240 (1%)
Frame = +3
Query: 35 VGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSG 94
+G P + C + ++W NG + TE+ +IH +G L + SG
Sbjct: 150 LGRPVVLHCSAKPVTA-----RISWLHNGKRLDRNTEQ-IKIH--RGTLTILSLNPSLSG 305
Query: 95 LYECEVRSLNRSKQKIINLKVFKNDNGLC-FNGEMKYDQIVKSANAGKIICPDLE-NFKD 152
Y+C N S +++ + L F+ + + N G I C E N K
Sbjct: 306 CYQCVA---NNSVGAVVSGPATVSAAALGDFDSSTMHVITAEEKNTGFIGCRVPESNPKA 476
Query: 153 EDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYN 212
E W K ++ +L G + +LNV+ +DKG+Y C Y + +
Sbjct: 477 EVRYKIRGKWLKHSTGNYI-----ILPSGN--LQVLNVSSKDKGSYKC-AAYNPVTSELK 632
Query: 213 VSRTMNLEVKESPLKMRPEFIYPN-NNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDED 271
V T + P ++P + + V S V +EC V SGV YW + +D
Sbjct: 633 VEPTGRKLLVSRPSSNGFHILHPALSQALAVLPHSPVTLEC-VVSGVPASQVYWLKDGQD 809
>gb|AF090866.1|AF090866 Mus musculus CDO (Cdo) mRNA, complete cds
Length = 3914
Score = 41.2 bits (95), Expect = 0.27
Identities = 57/240 (23%), Positives = 93/240 (38%), Gaps = 3/240 (1%)
Frame = +3
Query: 35 VGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSG 94
+G P + C + ++W NG + TE+ +IH +G L + SG
Sbjct: 150 LGRPVVLHCSAKPVTA-----RISWLHNGKRLDRNTEQ-IKIH--RGTLTILSLNPSLSG 305
Query: 95 LYECEVRSLNRSKQKIINLKVFKNDNGLC-FNGEMKYDQIVKSANAGKIICPDLE-NFKD 152
Y+C N S +++ + L F+ + + N G I C E N K
Sbjct: 306 CYQCVA---NNSVGAVVSGPATVSAAALGDFDSSTMHVITAEEKNTGFIGCRVPESNPKA 476
Query: 153 EDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYN 212
E W K ++ +L G + +LNV+ +DKG+Y C Y + +
Sbjct: 477 EVRYKIRGKWLKHSTGNYI-----ILPSGN--LQVLNVSSKDKGSYKC-AAYNPVTSELK 632
Query: 213 VSRTMNLEVKESPLKMRPEFIYPN-NNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDED 271
V T + P ++P + + V S V +EC V SGV YW + +D
Sbjct: 633 VEPTGRKLLVSRPSSNGFHILHPALSQALAVLPHSPVTLEC-VVSGVPASQVYWLKDGQD 809
>emb|AJ001038.1|MMMPROT Mus musculus mRNA for M-protein
Length = 5074
Score = 41.2 bits (95), Expect = 0.27
Identities = 41/180 (22%), Positives = 73/180 (39%), Gaps = 19/180 (10%)
Frame = +3
Query: 54 DYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINL 113
+ ++WY + + + R + L +D G Y E+ S Q+ ++L
Sbjct: 3873 EMKVSWYHKEAKISSSEHMRIGGSEEMAWLQICEPTEKDKGKYTFEIFDGKDSHQRSLDL 4052
Query: 114 KVFKNDNGLCFNGEMKYDQIVKSA-----NAGKII--CPDLENFKDEDNIN--------- 157
+G F+ Q +K+A N GK+I PD+ + +N
Sbjct: 4053 ------SGQAFDEAYAEFQQLKAAAFAEKNRGKVIGGLPDVVTIMEGKTLNLTCTVFGNP 4214
Query: 158 -PEIHWYKECKSGFLEDKRLVLAEGEN--AILILNVTIQDKGNYTCRMVYTYMGKQYNVS 214
PE+ W+K K L + LV E ++ I VT +D G Y+ + Y G++ +V+
Sbjct: 4215 DPEVVWFKNDKDIELSEHFLVKMEQSKYVSLTIQGVTAEDSGKYSINVKNKYGGEKIDVT 4394
>gb|AF167341.1|F167333S09 Homo sapiens membrane interleukin 1 receptor accessory protein
(IL1RAP) gene, exons 10 and 11
Length = 2102
Score = 41.2 bits (95), Expect = 0.27
Identities = 24/52 (46%), Positives = 28/52 (53%)
Frame = +2
Query: 384 DGKIYDAYVLYPKNRESCLYSSDIFALKILPEVLERQCGYNLFIFGRNDLAG 435
DGK YD YV Y +N E + F L L VLE + GY L IF R+ L G
Sbjct: 1646 DGKEYDIYVSYARNAEE-----EEFVLLTLRGVLENEFGYKLCIFDRDSLPG 1786
>gb|L22579.1|VARCG Variola major virus (strain Bangladesh-1975) complete genome
Length = 186103
Score = 40.8 bits (94), Expect = 0.35
Identities = 47/171 (27%), Positives = 76/171 (43%), Gaps = 7/171 (4%)
Frame = +1
Query: 92 DSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMK-YDQIVKSANAGKIICPDLENF 150
DSG+Y C ++ S +NL + N ++ Y QIV + G++ CP N
Sbjct: 163942 DSGIYMCITKNETYSDMMSLNLTIVSVSES---NIDLI*YPQIVNERSTGEM-CPS--NA 164103
Query: 151 KDEDNINPEIHWYKECKSGFLEDKRL------VLAEGENAILILNVTIQDKGNYTCRMVY 204
NIN +I W + L +KRL ++ + ++L +T Y +Y
Sbjct: 164104 FIASNINTDIIWSGHQR---LRNKRLKQRTPGIITIEDVRKMMLVITHVF*YIYIYIYIY 164274
Query: 205 TYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVS 255
Y K YNV+R + LEV + K+ P + + LGS++ + C VS
Sbjct: 164275 IYGSKAYNVTRIVKLEVWD---KIIPSTMQLPKGLV-TSLGSNLTIACKVS 164415
>gb|AF200348.1|AF200348 Homo sapiens melanoma-associated antigen MG50 mRNA, partial cds
Length = 6847
Score = 40.8 bits (94), Expect = 0.35
Identities = 55/225 (24%), Positives = 93/225 (40%), Gaps = 1/225 (0%)
Frame = +1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N VLVGE + C H ++W R G P+ + R I GL +I
Sbjct: 1099 NTEVLVGESVTLECSATG----HPPPRISWTR-GDRTPLPVDPRVNITPSGGL--YIQNV 1257
Query: 90 LE-DSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
++ DSG Y C + S ++ F L D++V C
Sbjct: 1258 VQGDSGEYACSATNNIDS----VHATAFIIVQALPQFTVTPQDRVVIEGQTVDFQC---- 1413
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
+ + N P I W K ++ + LVL+ G + I V + D+G Y C+ V +G
Sbjct: 1414 --EAKGNPPPVIAWTKGGSQLSVDRRHLVLSSG--TLRISGVALHDQGQYECQAV-NIIG 1578
Query: 209 KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECN 253
Q V+ + ++ + +P+ P++ T+EV G++V + C+
Sbjct: 1579 SQKVVAH-LTVQPRVTPVFAS----IPSDTTVEV--GANVQLPCS 1692
>ref|XM_081958.1| Poly-glutamine tract binding protein 1, mRNA
Length = 900
Score = 40.8 bits (94), Expect = 0.35
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 7/166 (4%)
Frame = +1
Query: 87 PAALEDSGLYECEVR-SLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKI--- 142
P D+GLY C+ + S+ S+Q + L V KY + SA ++
Sbjct: 40 PVGRRDAGLYTCQAQNSVGTSEQLSVQLDV-------------KYPPKIISAGPDRLTTA 180
Query: 143 --ICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
P + N P W + G + V E+ ++I NVT + +G Y C
Sbjct: 181 PLFSPAAFECLADGNPLPSFKWVQRMAHG----SKYVERGSESRLVIDNVTYEYQGEYEC 348
Query: 201 RMVYTYMGKQ-YNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELG 245
R G++ +S ++L+V +P +R ++P+ +T+ V+ G
Sbjct: 349 RATSYINGQERVAISDPVSLQVVGAPQVLR---LHPSLHTVSVKRG 477
>ref|XM_056455.1| Homo sapiens Melanoma associated gene (D2S448), mRNA
Length = 6801
Score = 40.8 bits (94), Expect = 0.35
Identities = 55/225 (24%), Positives = 93/225 (40%), Gaps = 1/225 (0%)
Frame = +1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N VLVGE + C H ++W R G P+ + R I GL +I
Sbjct: 1099 NTEVLVGESVTLECSATG----HPPPRISWTR-GDRTPLPVDPRVNITPSGGL--YIQNV 1257
Query: 90 LE-DSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
++ DSG Y C + S ++ F L D++V C
Sbjct: 1258 VQGDSGEYACSATNNIDS----VHATAFIIVQALPQFTVTPQDRVVIEGQTVDFQC---- 1413
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
+ + N P I W K ++ + LVL+ G + I V + D+G Y C+ V +G
Sbjct: 1414 --EAKGNPPPVIAWTKGGSQLSVDRRHLVLSSG--TLRISGVALHDQGQYECQAV-NIIG 1578
Query: 209 KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECN 253
Q V+ + ++ + +P+ P++ T+EV G++V + C+
Sbjct: 1579 SQKVVAH-LTVQPRVTPVFAS----IPSDTTVEV--GANVQLPCS 1692
>gb|M77196.1|MUSHPVRA Mouse hepatitis virus receptor mRNA, complete cds
Length = 2645
Score = 40.8 bits (94), Expect = 0.35
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 3/220 (1%)
Frame = +1
Query: 54 DYNLTWYRNGSNMPITTERRA--RIHQRKGLLWFIPAALEDSGLYECEVRSLN-RSKQKI 110
D + + SNM T + + I G L F ++D G+Y ++ N R Q
Sbjct: 295 DKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTLDMTDENYRRTQAT 474
Query: 111 INLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGF 170
+ V + L N V+ ++ + C +++ D DNIN W + +S
Sbjct: 475 VRFHV--HPILLKPNITSNNSNPVEGDDSVSLTC---DSYTDPDNIN--YLWSRNGES-L 630
Query: 171 LEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRP 230
E RL L+EG + +LNVT D G Y C T N S +L + P
Sbjct: 631 SEGDRLKLSEGNRTLTLLNVTRNDTGPYVCE---TRNPVSVNRSDPFSLNIIYGP---DT 792
Query: 231 EFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDE 270
I P++ I + GS++ + C+ +S +W +N++
Sbjct: 793 PIISPSD--IYLHPGSNLNLSCHAASNPPAQY-FWLINEK 903
>emb|AJ278495.1|DME278495 Drosophila melanogaster mRNA for PQBP-1 homologue (PQBP-1 gene)
Length = 509
Score = 40.8 bits (94), Expect = 0.35
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 7/166 (4%)
Frame = +1
Query: 87 PAALEDSGLYECEVR-SLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKI--- 142
P D+GLY C+ + S+ S+Q + L V KY + SA ++
Sbjct: 40 PVGRRDAGLYTCQAQNSVGTSEQLSVQLDV-------------KYPPKIISAGPDRLTTA 180
Query: 143 --ICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
P + N P W + G + V E+ ++I NVT + +G Y C
Sbjct: 181 PLFSPAAFECLADGNPLPSFKWVQRMAHG----SKYVERGSESRLVIDNVTYEYQGEYEC 348
Query: 201 RMVYTYMGKQ-YNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELG 245
R G++ +S ++L+V +P +R ++P+ +T+ V+ G
Sbjct: 349 RATSYINGQERVAISDPVSLQVVGAPQVLR---LHPSLHTVSVKRG 477
>gb|BC016891.1|BC016891 Mus musculus, clone MGC:18556 IMAGE:4218391, mRNA, complete cds
Length = 3444
Score = 40.8 bits (94), Expect = 0.35
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 3/220 (1%)
Frame = +2
Query: 54 DYNLTWYRNGSNMPITTERRA--RIHQRKGLLWFIPAALEDSGLYECEVRSLN-RSKQKI 110
D + + SNM T + + I G L F ++D G+Y ++ N R Q
Sbjct: 269 DKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTLDMTDENYRRTQAT 448
Query: 111 INLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGF 170
+ V + L N V+ ++ + C +++ D DNIN W + +S
Sbjct: 449 VRFHV--HPILLKPNITSNNSNPVEGDDSVSLTC---DSYTDPDNIN--YLWSRNGES-L 604
Query: 171 LEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRP 230
E RL L+EG + +LNVT D G Y C T N S +L + P
Sbjct: 605 SEGDRLKLSEGNRTLTLLNVTRNDTGPYVCE---TRNPVSVNRSDPFSLNIIYGP---DT 766
Query: 231 EFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDE 270
I P++ I + GS++ + C+ +S +W +N++
Sbjct: 767 PIISPSD--IYLHPGSNLNLSCHAASNPPAQY-FWLINEK 877
>gb|U81035.1|RNU81035 Rattus norvegicus ankyrin binding cell adhesion molecule neurofascin
mRNA, partial cds
Length = 3498
Score = 40.8 bits (94), Expect = 0.35
Identities = 35/168 (20%), Positives = 74/168 (43%)
Frame = +1
Query: 33 VLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALED 92
V++ T + CP P+ L W++NG + ++Q G L ED
Sbjct: 1285 VILYNRTRLDCPFFGSPIP----TLRWFKNGQGSNLDGGNY-HVYQN-GSLEIKMIRKED 1446
Query: 93 SGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKD 152
G+Y C ++ + + L+V K+ + M DQ+ K ++ C K
Sbjct: 1447 QGIYTCVATNILGKAENQVRLEV-KDPTRIY---RMPEDQVAKRGTTVQLEC----RVKH 1602
Query: 153 EDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+ ++ + W K+ + ++ ++ + + ++++ I V +D+G+YTC
Sbjct: 1603 DPSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTC 1737
>emb|X67279.1|MMBGPD M.musculus Bgpd mRNA for biliary glycoprotein
Length = 2922
Score = 40.8 bits (94), Expect = 0.35
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 3/220 (1%)
Frame = +2
Query: 54 DYNLTWYRNGSNMPITTERRA--RIHQRKGLLWFIPAALEDSGLYECEVRSLN-RSKQKI 110
D + + SNM T + + I G L F ++D G+Y ++ N R Q
Sbjct: 329 DKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTLDMTDENYRRTQAT 508
Query: 111 INLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGF 170
+ V + L N V+ ++ + C +++ D DNIN W + +S
Sbjct: 509 VRFHV--HPILLKPNITSNNSNPVEGDDSVSLTC---DSYTDPDNIN--YLWSRNGES-L 664
Query: 171 LEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRP 230
E RL L+EG + +LNVT D G Y C T N S +L + P
Sbjct: 665 SEGDRLKLSEGNRTLTLLNVTRNDTGPYVCE---TRNPVSVNRSDPFSLNIIYGP---DT 826
Query: 231 EFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDE 270
I P++ I + GS++ + C+ +S +W +N++
Sbjct: 827 PIISPSD--IYLHPGSNLNLSCHAASNPPAQY-FWLINEK 937
>dbj|D86983.1|D86983 Human mRNA for KIAA0230 gene, partial cds
Length = 5510
Score = 40.8 bits (94), Expect = 0.35
Identities = 55/225 (24%), Positives = 93/225 (40%), Gaps = 1/225 (0%)
Frame = +1
Query: 30 NYFVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAA 89
N VLVGE + C H ++W R G P+ + R I GL +I
Sbjct: 1099 NTEVLVGESVTLECSATG----HPPPRISWTR-GDRTPLPVDPRVNITPSGGL--YIQNV 1257
Query: 90 LE-DSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
++ DSG Y C + S ++ F L D++V C
Sbjct: 1258 VQGDSGEYACSATNNIDS----VHATAFIIVQALPQFTVTPQDRVVIEGQTVDFQC---- 1413
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMG 208
+ + N P I W K ++ + LVL+ G + I V + D+G Y C+ V +G
Sbjct: 1414 --EAKGNPPPVIAWTKGGSQLSVDRRHLVLSSG--TLRISGVALHDQGQYECQAV-NIIG 1578
Query: 209 KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECN 253
Q V+ + ++ + +P+ P++ T+EV G++V + C+
Sbjct: 1579 SQKVVAH-LTVQPRVTPVFAS----IPSDTTVEV--GANVQLPCS 1692
>gb|L11002.1|RATANKBIND Rat ankyrin binding glycoprotein-1 related mRNA sequence
Length = 5822
Score = 40.8 bits (94), Expect = 0.35
Identities = 35/168 (20%), Positives = 74/168 (43%)
Frame = +2
Query: 33 VLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALED 92
V++ T + CP P+ L W++NG + ++Q G L ED
Sbjct: 2363 VILYNRTRLDCPFFGSPIP----TLRWFKNGQGSNLDGGNY-HVYQN-GSLEIKMIRKED 2524
Query: 93 SGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKD 152
G+Y C ++ + + L+V K+ + M DQ+ K ++ C K
Sbjct: 2525 QGIYTCVATNILGKAENQVRLEV-KDPTRIY---RMPEDQVAKRGTTVQLEC----RVKH 2680
Query: 153 EDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+ ++ + W K+ + ++ ++ + + ++++ I V +D+G+YTC
Sbjct: 2681 DPSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTC 2815
>emb|X15351.1|MMMCEA1 Mouse mRNA fragment for carcinoembryonic antigen (CEA)-like antigen
Length = 1786
Score = 40.8 bits (94), Expect = 0.35
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 3/220 (1%)
Frame = +2
Query: 54 DYNLTWYRNGSNMPITTERRA--RIHQRKGLLWFIPAALEDSGLYECEVRSLN-RSKQKI 110
D + + SNM T + + I G L F ++D G+Y ++ N R Q
Sbjct: 329 DKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTLDMTDENYRRTQAT 508
Query: 111 INLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGF 170
+ V + L N V+ ++ + C +++ D DNIN W + +S
Sbjct: 509 VRFHV--HPILLKPNITSNNSNPVEGDDSVSLTC---DSYTDPDNIN--YLWSRNGES-L 664
Query: 171 LEDKRLVLAEGENAILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRP 230
E RL L+EG + +LNVT D G Y C T N S +L + P
Sbjct: 665 SEGDRLKLSEGNRTLTLLNVTRNDTGPYVCE---TRNPVSVNRSDPFSLNIIYGP---DT 826
Query: 231 EFIYPNNNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDE 270
I P++ I + GS++ + C+ +S +W +N++
Sbjct: 827 PIISPSD--IYLHPGSNLNLSCHAASNPPAQY-FWLINEK 937
>emb|X78568.1|MMEMRK2 M.musculus EmRK2 cDNA
Length = 5482
Score = 40.8 bits (94), Expect = 0.35
Identities = 60/238 (25%), Positives = 96/238 (40%), Gaps = 16/238 (6%)
Frame = +3
Query: 33 VLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQR-----------KG 81
+L+G+ ++C T L++ ++W N P +RA I QR
Sbjct: 969 LLLGQTLVLNCTATT--ELNTRVQMSW-----NYPGKATKRASIRQRIDRSHSHNNVFHS 1127
Query: 82 LLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGK 141
+L D GLY C V+S S + N V + G F Q V+ AG+
Sbjct: 1128 VLKINNVESRDKGLYTCRVKS--GSSFQSFNTSVHVYEKG--FISVKHRKQPVQETTAGR 1295
Query: 142 IICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
+ K + +PEI W K+ L+ R L G +++I +VT +D G+YT
Sbjct: 1296 --RSYRLSMKVKAFPSPEIVWLKDGSPATLKSAR-YLVHG-YSLIIKDVTTEDAGDYTIL 1463
Query: 202 MVYTYMGKQYNVSRTMNLEVK-----ESPLKMRPEFIYPNNNTIEVELGSHVVMECNV 254
+ N++ T+ + VK +S + +YP LGS V+ C V
Sbjct: 1464 LGIKQSRLFKNLTATLIVNVKPQIYEKSVSSLPSPPLYP--------LGSRQVLTCTV 1613
Score = 36.6 bits (83), Expect = 6.5
Identities = 27/113 (23%), Positives = 48/113 (41%)
Frame = +3
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
+LEDSG Y C R++ + + +V D+ + D V + + + C
Sbjct: 2121 SLEDSGTYACRARNIYTGEDILRKTEVLVRDSEAPHLLQNLSDYEVSISGSTTLDC---- 2288
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
+ P+I W K ++ ++L G + + I VT +D+G Y CR
Sbjct: 2289 --QARGVPAPQITWLKN-NHKIQQEPGIILGPGNSTLFIERVTEEDEGVYRCR 2438
>gb|M18216.1|HUMANTNCA Human nonspecific crossreacting antigen mRNA, complete cds
Length = 2527
Score = 40.8 bits (94), Expect = 0.35
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 3/146 (2%)
Frame = +2
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVR---SLNRSKQKIINLKV 115
W+ NG ++P++ R ++ L + D+G YECE++ S NRS +N+ +
Sbjct: 578 WWVNGQSLPVSP--RLQLSNGNMTLTLLSVKRNDAGSYECEIQNPASANRSDPVTLNV-L 748
Query: 116 FKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKR 175
+ D G I P N++ +N+N H + +
Sbjct: 749 YGPD--------------------GPTISPSKANYRPGENLNLSCHAASNPPAQYSWFIN 868
Query: 176 LVLAEGENAILILNVTIQDKGNYTCR 201
+ + I N+T+ + G+Y C+
Sbjct: 869 GTFQQSTQELFIPNITVNNSGSYMCQ 946
>gb|U81036.1|RNU81036 Rattus norvegicus ankyrin binding cell adhesion molecule neurofascin
mRNA, alternatively spliced form, partial cds
Length = 3651
Score = 40.8 bits (94), Expect = 0.35
Identities = 35/168 (20%), Positives = 74/168 (43%)
Frame = +1
Query: 33 VLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALED 92
V++ T + CP P+ L W++NG + ++Q G L ED
Sbjct: 1252 VILYNRTRLDCPFFGSPIP----TLRWFKNGQGSNLDGGNY-HVYQN-GSLEIKMIRKED 1413
Query: 93 SGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKD 152
G+Y C ++ + + L+V K+ + M DQ+ K ++ C K
Sbjct: 1414 QGIYTCVATNILGKAENQVRLEV-KDPTRIY---RMPEDQVAKRGTTVQLEC----RVKH 1569
Query: 153 EDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTC 200
+ ++ + W K+ + ++ ++ + + ++++ I V +D+G+YTC
Sbjct: 1570 DPSLKLTVSWLKDDEPLYIGNR---MKKEDDSLTIFGVAERDQGSYTC 1704
>ref|NM_002483.1| Homo sapiens carcinoembryonic antigen-related cell adhesion
molecule 6 (non-specific cross reacting antigen)
(CEACAM6), mRNA
Length = 1189
Score = 40.8 bits (94), Expect = 0.35
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 3/146 (2%)
Frame = +1
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVR---SLNRSKQKIINLKV 115
W+ NG ++P++ R ++ L + D+G YECE++ S NRS +N+ +
Sbjct: 625 WWVNGQSLPVSP--RLQLSNGNMTLTLLSVKRNDAGSYECEIQNPASANRSDPVTLNV-L 795
Query: 116 FKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKR 175
+ D G I P N++ +N+N H + +
Sbjct: 796 YGPD--------------------GPTISPSKANYRPGENLNLSCHAASNPPAQYSWFIN 915
Query: 176 LVLAEGENAILILNVTIQDKGNYTCR 201
+ + I N+T+ + G+Y C+
Sbjct: 916 GTFQQSTQELFIPNITVNNSGSYMCQ 993
>gb|M29541.1|HUMNCB Human normal cross-reacting antigen mRNA (NCA), complete cds
Length = 1189
Score = 40.8 bits (94), Expect = 0.35
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 3/146 (2%)
Frame = +1
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVR---SLNRSKQKIINLKV 115
W+ NG ++P++ R ++ L + D+G YECE++ S NRS +N+ +
Sbjct: 625 WWVNGQSLPVSP--RLQLSNGNMTLTLLSVKRNDAGSYECEIQNPASANRSDPVTLNV-L 795
Query: 116 FKNDNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKR 175
+ D G I P N++ +N+N H + +
Sbjct: 796 YGPD--------------------GPTISPSKANYRPGENLNLSCHAASNPPAQYSWFIN 915
Query: 176 LVLAEGENAILILNVTIQDKGNYTCR 201
+ + I N+T+ + G+Y C+
Sbjct: 916 GTFQQSTQELFIPNITVNNSGSYMCQ 993
>emb|X15423.1|CEUNC22 Caenorhabditis elegans unc-22 gene for twitchin
Length = 47081
Score = 40.4 bits (93), Expect = 0.45
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Frame = +3
Query: 157 NPEIHWYKECK---SGFLEDKRLVLAEGENAILILNVTIQDKGNYTC-------RMVYTY 206
N +I WYK+ K SG L+ K +V+ + ++I N + D G YTC T
Sbjct: 14568 NAKIRWYKDRKEIFSGGLKYK-IVIEKNVCTLIINNPEVDDTGKYTCEANGVPTHAQLTV 14744
Query: 207 MG-KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSS 256
+G + + NL++ S M+ F+ P NT E+ V+ C V++
Sbjct: 14745 LG*LFFGIKFFYNLQLLISEPPMKYSFLNPLPNTQEIYRTKQAVLTCKVNT 14897
Score = 38.1 bits (87), Expect = 2.2
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +1
Query: 158 PEIHWYKECKSGFLEDKRLVLAEGENAILILN-VTIQDKGNYTCRMVYTYMGKQYNVSRT 216
PE W+K CK K ++ +G+ +LI+N +T D YTCR S
Sbjct: 29350 PEYRWFKGCKELVDTSKYTLINKGDKQVLIINDLTSDDADEYTCRAT----NSSGTRSTR 29517
Query: 217 MNLEVKESP 225
NL +K P
Sbjct: 29518 ANLRIKTKP 29544
>ref|NM_010228.1| Mus musculus FMS-like tyrosine kinase 1 (Flt1), mRNA
Length = 6055
Score = 40.4 bits (93), Expect = 0.45
Identities = 41/173 (23%), Positives = 70/173 (39%), Gaps = 7/173 (4%)
Frame = +3
Query: 36 GEPTAISCPV-------ITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPA 88
GE +SC V IT +L + N T + + S + T + I L
Sbjct: 1737 GEDLKLSCVVNKFLYRDITWILLRTVNNRTMHHSISKQKMATTQDYSITLN---LVIKNV 1907
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
+LEDSG Y C R++ + + +V D+ + D V + + + C
Sbjct: 1908 SLEDSGTYACRARNIYTGEDILRKTEVLVRDSEAPHLLQNLSDYEVSISGSTTLDC---- 2075
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
+ P+I W+K ++ ++L G + + I VT +D+G Y CR
Sbjct: 2076 --QARGVPAPQITWFKN-NHKIQQEPGIILGPGNSTLFIERVTEEDEGVYRCR 2225
Score = 39.3 bits (90), Expect = 1.0
Identities = 60/238 (25%), Positives = 95/238 (39%), Gaps = 16/238 (6%)
Frame = +3
Query: 33 VLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQR-----------KG 81
+L G+ ++C T L++ ++W N P +RA I QR
Sbjct: 753 LLHGQTLVLNCTATT--ELNTRVQMSW-----NYPGKATKRASIRQRIDRSHSHNNVFHS 911
Query: 82 LLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGK 141
+L D GLY C V+S S + N V + G F Q V+ AG+
Sbjct: 912 VLKINNVESRDKGLYTCRVKS--GSSFQSFNTSVHVYEKG--FISVKHRKQPVQETTAGR 1079
Query: 142 IICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
+ K + +PEI W K+ L+ R L G +++I +VT +D G+YT
Sbjct: 1080--RSYRLSMKVKAFPSPEIVWLKDGSPATLKSAR-YLVHG-YSLIIKDVTTEDAGDYTIL 1247
Query: 202 MVYTYMGKQYNVSRTMNLEVK-----ESPLKMRPEFIYPNNNTIEVELGSHVVMECNV 254
+ N++ T+ + VK +S + +YP LGS V+ C V
Sbjct: 1248LGIKQSRLFKNLTATLIVNVKPQIYEKSVSSLPSPPLYP--------LGSRQVLTCTV 1397
>gb|L07297.1|MUSRTKB Mus musculus receptor tyrosine kinase (FLT) mRNA, complete cds
Length = 6055
Score = 40.4 bits (93), Expect = 0.45
Identities = 41/173 (23%), Positives = 70/173 (39%), Gaps = 7/173 (4%)
Frame = +3
Query: 36 GEPTAISCPV-------ITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPA 88
GE +SC V IT +L + N T + + S + T + I L
Sbjct: 1737 GEDLKLSCVVNKFLYRDITWILLRTVNNRTMHHSISKQKMATTQDYSITLN---LVIKNV 1907
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
+LEDSG Y C R++ + + +V D+ + D V + + + C
Sbjct: 1908 SLEDSGTYACRARNIYTGEDILRKTEVLVRDSEAPHLLQNLSDYEVSISGSTTLDC---- 2075
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
+ P+I W+K ++ ++L G + + I VT +D+G Y CR
Sbjct: 2076 --QARGVPAPQITWFKN-NHKIQQEPGIILGPGNSTLFIERVTEEDEGVYRCR 2225
Score = 39.3 bits (90), Expect = 1.0
Identities = 60/238 (25%), Positives = 95/238 (39%), Gaps = 16/238 (6%)
Frame = +3
Query: 33 VLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQR-----------KG 81
+L G+ ++C T L++ ++W N P +RA I QR
Sbjct: 753 LLHGQTLVLNCTATT--ELNTRVQMSW-----NYPGKATKRASIRQRIDRSHSHNNVFHS 911
Query: 82 LLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGK 141
+L D GLY C V+S S + N V + G F Q V+ AG+
Sbjct: 912 VLKINNVESRDKGLYTCRVKS--GSSFQSFNTSVHVYEKG--FISVKHRKQPVQETTAGR 1079
Query: 142 IICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
+ K + +PEI W K+ L+ R L G +++I +VT +D G+YT
Sbjct: 1080--RSYRLSMKVKAFPSPEIVWLKDGSPATLKSAR-YLVHG-YSLIIKDVTTEDAGDYTIL 1247
Query: 202 MVYTYMGKQYNVSRTMNLEVK-----ESPLKMRPEFIYPNNNTIEVELGSHVVMECNV 254
+ N++ T+ + VK +S + +YP LGS V+ C V
Sbjct: 1248LGIKQSRLFKNLTATLIVNVKPQIYEKSVSSLPSPPLYP--------LGSRQVLTCTV 1397
>gb|AE003473.1|AE003473 Drosophila melanogaster genomic scaffold 142000013386045 section 7 of 17,
complete sequence
Length = 304106
Score = 40.4 bits (93), Expect = 0.45
Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 2/251 (0%)
Frame = -3
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W+ NG + R + L L DSG Y C+V+ + Q + + K
Sbjct: 206880 WFFNGKELSGMDHRVVVEDGKTHKLVIRNTNLRDSGTYTCKVKK--QETQSTVEVLQRKP 206707
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
D F ++ ++ + A D+E + E+ WYK+ + E+K +
Sbjct: 206706 D----FIKVLEDYEVTEKDTA----ILDVELTTEAT----EVTWYKDGEKITPENKNVEF 206563
Query: 179 AEGENA--ILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPN 236
+ A ++I +VTI D+G YTC++ G++ + + +++ PE + P
Sbjct: 206562 IKDGKARRLVIRDVTIHDEGQYTCKI----EGQECSCELVV--------IELPPEIVEPL 206419
Query: 237 NNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSG 296
N+ + V G + V E +S G L W N +++ + E+ +A+ G
Sbjct: 206418 ND-VAVTKGENAVFEVELSKG--DALVKWFKNGKEI-----VFNERIQ-------LAIDG 206284
Query: 297 TKFNISEVKLK 307
K ++ VK K
Sbjct: 206283 KKQSLRIVKAK 206251
>gb|AC010063.6| Drosophila melanogaster 3L BAC RPCI98-16A3 (Roswell Park Cancer
Institute Human PAC library) complete sequence
Length = 194004
Score = 40.4 bits (93), Expect = 0.45
Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 2/251 (0%)
Frame = +3
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W+ NG + R + L L DSG Y C+V+ + Q + + K
Sbjct: 25014 WFFNGKELSGMDHRVVVEDGKTHKLVIRNTNLRDSGTYTCKVK--KQETQSTVEVLQRKP 25187
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
D F ++ ++ + A D+E + E+ WYK+ + E+K +
Sbjct: 25188 D----FIKVLEDYEVTEKDTA----ILDVELTTEA----TEVTWYKDGEKITPENKNVEF 25331
Query: 179 AEGENA--ILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPN 236
+ A ++I +VTI D+G YTC++ G++ + + +++ PE + P
Sbjct: 25332 IKDGKARRLVIRDVTIHDEGQYTCKI----EGQECSCELVV--------IELPPEIVEPL 25475
Query: 237 NNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSG 296
N+ + V G + V E +S G L W N +++ + E+ +A+ G
Sbjct: 25476 ND-VAVTKGENAVFEVELSKG--DALVKWFKNGKEI-----VFNERIQ-------LAIDG 25610
Query: 297 TKFNISEVKLK 307
K ++ VK K
Sbjct: 25611 KKQSLRIVKAK 25643
>dbj|D88689.1|D88689 Mus musculus mRNA for flt-1, complete cds
Length = 6275
Score = 40.4 bits (93), Expect = 0.45
Identities = 41/173 (23%), Positives = 70/173 (39%), Gaps = 7/173 (4%)
Frame = +3
Query: 36 GEPTAISCPV-------ITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPA 88
GE +SC V IT +L + N T + + S + T + I L
Sbjct: 1962 GEDLKLSCVVNKFLYRDITWILLRTVNNRTMHHSISKQKMATTQDYSITLN---LVIKNV 2132
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
+LEDSG Y C R++ + + +V D+ + D V + + + C
Sbjct: 2133 SLEDSGTYACRARNIYTGEDILRKTEVLVRDSEAPHLLQNLSDYEVSISGSTTLDC---- 2300
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
+ P+I W+K ++ ++L G + + I VT +D+G Y CR
Sbjct: 2301 --QARGVPAPQITWFKN-NHKIQQEPGIILGPGNSTLFIERVTEEDEGVYRCR 2450
Score = 39.3 bits (90), Expect = 1.0
Identities = 60/238 (25%), Positives = 95/238 (39%), Gaps = 16/238 (6%)
Frame = +3
Query: 33 VLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQR-----------KG 81
+L G+ ++C T L++ ++W N P +RA I QR
Sbjct: 978 LLHGQTLVLNCTATT--ELNTRVQMSW-----NYPGKATKRASIRQRIDRSHSHNNVFHS 1136
Query: 82 LLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGK 141
+L D GLY C V+S S + N V + G F Q V+ AG+
Sbjct: 1137 VLKINNVESRDKGLYTCRVKS--GSSFQSFNTSVHVYEKG--FISVKHRKQPVQETTAGR 1304
Query: 142 IICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
+ K + +PEI W K+ L+ R L G +++I +VT +D G+YT
Sbjct: 1305 --RSYRLSMKVKAFPSPEIVWLKDGSPATLKSAR-YLVHG-YSLIIKDVTTEDAGDYTIL 1472
Query: 202 MVYTYMGKQYNVSRTMNLEVK-----ESPLKMRPEFIYPNNNTIEVELGSHVVMECNV 254
+ N++ T+ + VK +S + +YP LGS V+ C V
Sbjct: 1473 LGIKQSRLFKNLTATLIVNVKPQIYEKSVSSLPSPPLYP--------LGSRQVLTCTV 1622
>gb|L10351.1|CELTWIMUSC Caenorhabditis elegans gene, exons 1 through 31
Length = 54962
Score = 40.4 bits (93), Expect = 0.45
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Frame = +3
Query: 157 NPEIHWYKECK---SGFLEDKRLVLAEGENAILILNVTIQDKGNYTC-------RMVYTY 206
N +I WYK+ K SG L+ K +V+ + ++I N + D G YTC T
Sbjct: 22449 NAKIRWYKDRKEIFSGGLKYK-IVIEKNVCTLIINNPEVDDTGKYTCEANGVPTHAQLTV 22625
Query: 207 MG-KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSS 256
+G + + NL++ S M+ F+ P NT E+ V+ C V++
Sbjct: 22626 LG*LFFGIKFFYNLQLLISEPPMKYSFLNPLPNTQEIYRTKQAVLTCKVNT 22778
Score = 38.1 bits (87), Expect = 2.2
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +1
Query: 158 PEIHWYKECKSGFLEDKRLVLAEGENAILILN-VTIQDKGNYTCRMVYTYMGKQYNVSRT 216
PE W+K CK K ++ +G+ +LI+N +T D YTCR S
Sbjct: 37231 PEYRWFKGCKELVDTSKYTLINKGDKQVLIINDLTSDDADEYTCRAT----NSSGTRSTR 37398
Query: 217 MNLEVKESP 225
NL +K P
Sbjct: 37399 ANLRIKTKP 37425
>emb|AJ271740.1|DME271740 Drosophila melanogaster D-Titin gene, exons 1-37
Length = 70398
Score = 40.4 bits (93), Expect = 0.45
Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 2/251 (0%)
Frame = +1
Query: 59 WYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKN 118
W+ NG + R + L L DSG Y C+V+ + Q + + K
Sbjct: 62266 WFFNGKELSGMDHRVVVEDGKTHKLVIRNTNLRDSGTYTCKVKK--QETQSTVEVLQRKP 62439
Query: 119 DNGLCFNGEMKYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVL 178
D F ++ ++ + A D+E + E+ WYK+ + E+K +
Sbjct: 62440 D----FIKVLEDYEVTEKDTA----ILDVELTTEAT----EVTWYKDGEKITPENKNVEF 62583
Query: 179 AEGENA--ILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPN 236
+ A ++I +VTI D+G YTC++ G++ + + +++ PE + P
Sbjct: 62584 IKDGKARRLVIRDVTIHDEGQYTCKI----EGQECSCELVV--------IELPPEIVEPL 62727
Query: 237 NNTIEVELGSHVVMECNVSSGVYGLLPYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSG 296
N+ + V G + V E +S G L W N +++ + E+ +A+ G
Sbjct: 62728 ND-VAVTKGENAVFEVELSKG--DALVKWFKNGKEI-----VFNERIQ-------LAIDG 62862
Query: 297 TKFNISEVKLK 307
K ++ VK K
Sbjct: 62863 KKQSLRIVKAK 62895
>gb|AF239957.1|AF239957 Mus musculus single Ig IL-1R-related protein mRNA, complete cds
Length = 1421
Score = 40.4 bits (93), Expect = 0.45
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Frame = +1
Query: 358 VYKIFKIDIVLWYRSSCHPLLGKKVSDGKIYDAYVLY---PKNRESCLYSSDIFALKILP 414
+Y +++++LWY+ + + +++DGK+YDAYV Y P++R+ F IL
Sbjct: 517 LYVKCRLNMLLWYQDTYGEV---EMNDGKLYDAYVSYSDCPEDRK--------FVNFILK 663
Query: 415 EVLERQCGYNLFIFGRNDL-AGEAVIDVTDEKIHQSRRVIIIL 456
LER+ GY F+ R+ L E D+ + + RR+I++L
Sbjct: 664 PQLERRRGYKPFLEDRDLLPRAEPSADLL-VNLSRCRRLIVVL 789
>gb|M24637.1|CHKCEK1 Chicken tyrosine kinase (cek1) mRNA, complete cds
Length = 2925
Score = 40.4 bits (93), Expect = 0.45
Identities = 61/235 (25%), Positives = 89/235 (36%), Gaps = 34/235 (14%)
Frame = +2
Query: 56 NLTWYRNGSNMPITTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKV 115
++ W R+G +P R RI + + A EDSGLY C S + S+ ++ V
Sbjct: 239 SINWVRDGVQLP--ENNRTRITGEE--VEVRDAVPEDSGLYACMTNSPSGSETTYFSVNV 406
Query: 116 FK--------NDNGLCFNGEMKYDQI----------------------VKSANAGKIICP 145
+D + E + D V +A K CP
Sbjct: 407 SDALPSAEDDDDEDDSSSEEKEADNTKPNQAVAPYWTYPEKMEKKLHAVPAAKTVKFKCP 586
Query: 146 DLENFKDEDNINPEIHWYKECKSGFLEDKRL---VLAEGENAILILNVTIQDKGNYTCRM 202
NP + W K K F D R+ + +I++ +V DKGNYTC
Sbjct: 587 S------GGTPNPTLRWLKNGKE-FKPDHRIGGYKVRYATWSIIMDSVVPSDKGNYTC-- 739
Query: 203 VYTYMGKQYNVSRTMNLEVKE-SPLKMRPEFIYPNNNTIEVELGSHVVMECNVSS 256
K +++ T L+V E SP + + P N T V LGS+V C V S
Sbjct: 740 --IVENKYGSINHTYQLDVVERSPHRPILQAGLPANKT--VALGSNVEFVCKVYS 892
>ref|NM_019306.1| Rattus norvegicus Fms-related tyrosine kinase 1 (vascular endothelial
growth factor/vascular permeability factor receptor)
(Flt1), mRNA
Length = 4734
Score = 40.4 bits (93), Expect = 0.45
Identities = 41/173 (23%), Positives = 70/173 (39%), Gaps = 7/173 (4%)
Frame = +3
Query: 36 GEPTAISCPV-------ITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPA 88
GE +SC V IT +L + N T + + S + T + I L
Sbjct: 1944 GEDLKLSCVVSKFLYRDITWILLRTVNNRTMHHSISKQKMATTQDYSITLN---LVIKNV 2114
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
+LEDSG Y C R++ ++ + +V D + D V + + + C
Sbjct: 2115 SLEDSGTYACRARNIYTGEEILRKTEVLVRDLEAPLLLQNLSDHEVSISGSTTLDC---- 2282
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
+ P+I W+K ++ ++L G + + I VT +D+G Y CR
Sbjct: 2283 --QARGVPAPQITWFKN-NHKIQQEPGIILGPGNSTLFIERVTEEDEGVYRCR 2432
Score = 36.6 bits (83), Expect = 6.5
Identities = 58/237 (24%), Positives = 93/237 (38%), Gaps = 16/237 (6%)
Frame = +3
Query: 34 LVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQR-----------KGL 82
L G+ ++C V T L++ ++W N P +RA I QR +
Sbjct: 963 LRGQTLVLNCTVTT--DLNTRVQMSW-----NYPGKATKRASIRQRIDQSNPHSNVFHSV 1121
Query: 83 LWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKI 142
L D GLY C V+S S + N V + G F Q V+ AGK
Sbjct: 1122 LKINNVESRDKGLYTCRVKS--GSSFRTFNTSVHVYEKG--FISVKHRKQQVQETIAGK- 1286
Query: 143 ICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRM 202
+ K + +PE+ W K+ +K + +++I +VT +D G+YT +
Sbjct: 1287 -RSHRLSMKVKAFPSPEVVWLKDGVPA--TEKSARYSVHGYSLIIKDVTAEDAGDYTILL 1457
Query: 203 VYTYMGKQYNVSRTMNLEVK-----ESPLKMRPEFIYPNNNTIEVELGSHVVMECNV 254
N++ T+ + VK +S + +YP LGS V+ C V
Sbjct: 1458 GIKQSKLFRNLTATLIVNVKPQIYEKSVSSLPSPPLYP--------LGSRQVLTCTV 1604
>emb|Z73897.1|CEZK617 Caenorhabditis elegans cosmid ZK617, complete sequence
Length = 45230
Score = 40.4 bits (93), Expect = 0.45
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Frame = -3
Query: 157 NPEIHWYKECK---SGFLEDKRLVLAEGENAILILNVTIQDKGNYTC-------RMVYTY 206
N +I WYK+ K SG L+ K +V+ + ++I N + D G YTC T
Sbjct: 18399 NAKIRWYKDRKEIFSGGLKYK-IVIEKNVCTLIINNPEVDDTGKYTCEANGVPTHAQLTV 18223
Query: 207 MG-KQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHVVMECNVSS 256
+G + + NL++ S M+ F+ P NT E+ V+ C V++
Sbjct: 18222 LG*LFFGIKFFYNLQLLISEPPMKYSFLNPLPNTQEIYRTKQAVLTCKVNT 18070
Score = 38.1 bits (87), Expect = 2.2
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -1
Query: 158 PEIHWYKECKSGFLEDKRLVLAEGENAILILN-VTIQDKGNYTCRMVYTYMGKQYNVSRT 216
PE W+K CK K ++ +G+ +LI+N +T D YTCR S
Sbjct: 3617 PEYRWFKGCKELVDTSKYTLINKGDKQVLIINDLTSDDADEYTCRAT----NSSGTRSTR 3450
Query: 217 MNLEVKESP 225
NL +K P
Sbjct: 3449 ANLRIKTKP 3423
>dbj|D28498.1|RATFLT1 Rat mRNA for Flt-1 tyrosine kinase receptor, complete cds
Length = 4734
Score = 40.4 bits (93), Expect = 0.45
Identities = 41/173 (23%), Positives = 70/173 (39%), Gaps = 7/173 (4%)
Frame = +3
Query: 36 GEPTAISCPV-------ITLPMLHSDYNLTWYRNGSNMPITTERRARIHQRKGLLWFIPA 88
GE +SC V IT +L + N T + + S + T + I L
Sbjct: 1944 GEDLKLSCVVSKFLYRDITWILLRTVNNRTMHHSISKQKMATTQDYSITLN---LVIKNV 2114
Query: 89 ALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPDLE 148
+LEDSG Y C R++ ++ + +V D + D V + + + C
Sbjct: 2115 SLEDSGTYACRARNIYTGEEILRKTEVLVRDLEAPLLLQNLSDHEVSISGSTTLDC---- 2282
Query: 149 NFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
+ P+I W+K ++ ++L G + + I VT +D+G Y CR
Sbjct: 2283 --QARGVPAPQITWFKN-NHKIQQEPGIILGPGNSTLFIERVTEEDEGVYRCR 2432
Score = 36.6 bits (83), Expect = 6.5
Identities = 58/237 (24%), Positives = 93/237 (38%), Gaps = 16/237 (6%)
Frame = +3
Query: 34 LVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPITTERRARIHQR-----------KGL 82
L G+ ++C V T L++ ++W N P +RA I QR +
Sbjct: 963 LRGQTLVLNCTVTT--DLNTRVQMSW-----NYPGKATKRASIRQRIDQSNPHSNVFHSV 1121
Query: 83 LWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKI 142
L D GLY C V+S S + N V + G F Q V+ AGK
Sbjct: 1122 LKINNVESRDKGLYTCRVKS--GSSFRTFNTSVHVYEKG--FISVKHRKQQVQETIAGK- 1286
Query: 143 ICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCRM 202
+ K + +PE+ W K+ +K + +++I +VT +D G+YT +
Sbjct: 1287 -RSHRLSMKVKAFPSPEVVWLKDGVPA--TEKSARYSVHGYSLIIKDVTAEDAGDYTILL 1457
Query: 203 VYTYMGKQYNVSRTMNLEVK-----ESPLKMRPEFIYPNNNTIEVELGSHVVMECNV 254
N++ T+ + VK +S + +YP LGS V+ C V
Sbjct: 1458 GIKQSKLFRNLTATLIVNVKPQIYEKSVSSLPSPPLYP--------LGSRQVLTCTV 1604
>ref|XM_039993.2| Homo sapiens fms-related tyrosine kinase 1 (vascular endothelial
growth factor/vascular permeability factor receptor)
(FLT1), mRNA
Length = 5788
Score = 40.0 bits (92), Expect = 0.59
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Frame = +1
Query: 36 GEPTAISCPV-------ITLPMLHSDYNLTWYRNGSN--MPITTERRARIHQRKGLLWFI 86
GE +SC V +T +L + N T + + S M IT E ++ L +
Sbjct: 1960 GEDLKLSCTVNKFLYRDVTWILLRTVNNRTMHYSISKQKMAITKEHSITLN-----LTIM 2124
Query: 87 PAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEMKYDQIVKSANAGKIICPD 146
+L+DSG Y C R++ ++ + ++ D + D V +++ + C
Sbjct: 2125 NVSLQDSGTYACRARNVYTGEEILQKKEITIRDQEAPYLLRNLSDHTVAISSSTTLDCH- 2301
Query: 147 LENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILILNVTIQDKGNYTCR 201
N E P+I W+K ++ ++L G + + I VT +D+G Y C+
Sbjct: 2302 -ANGVPE----PQITWFKN-NHKIQQEPGIILGPGSSTLFIERVTEEDEGVYHCK 2448
Score = 37.4 bits (85), Expect = 3.8
Identities = 18/71 (25%), Positives = 36/71 (50%)
Frame = +1
Query: 185 ILILNVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVEL 244
+ I+NV++QD G Y CR Y G++ + + + +E+P +R N + V +
Sbjct: 2113 LTIMNVSLQDSGTYACRARNVYTGEEILQKKEITIRDQEAPYLLR------NLSDHTVAI 2274
Query: 245 GSHVVMECNVS 255
S ++C+ +
Sbjct: 2275 SSSTTLDCHAN 2307
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 12, 2002 2:19 AM
Number of letters in database: 566,364,212
Number of sequences in database: 1,171,752
Lambda K H
0.320 0.138 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,200,024,365
Number of Sequences: 1171752
Number of extensions: 47762702
Number of successful extensions: 206792
Number of sequences better than 10.0: 918
Number of HSP's better than 10.0 without gapping: 38445
Number of HSP's successfully gapped in prelim test: 8278
Number of HSP's that attempted gapping in prelim test: 138661
Number of HSP's gapped (non-prelim): 111414
length of query: 555
length of database: 1,620,443,836
effective HSP length: 140
effective length of query: 415
effective length of database: 1,456,398,556
effective search space: 604405400740
effective search space used: 604405400740
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)