TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(461 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,164,257 sequences; 587,334,133 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
gb|AF152356.2|AF152356 Gallus gallus Sox10 protein (Sox10) ... 825 0.0
emb|AJ245601.1|GGA245601 Gallus gallus mRNA for Sry-box tra... 825 0.0
gb|BC018808.1|BC018808 Homo sapiens, clone IMAGE:4861099, mRNA 704 0.0
gb|BC002824.1|BC002824 Homo sapiens, SRY (sex determining r... 704 0.0
ref|NM_006941.1| Homo sapiens SRY (sex determining region Y... 704 0.0
emb|AJ001183.1|HSJ001183 Homo sapiens mRNA for Sox10 protein 704 0.0
ref|XM_009977.4| Homo sapiens SRY (sex determining region Y... 704 0.0
gb|BC007595.1|BC007595 Homo sapiens, SRY (sex determining r... 704 0.0
gb|AF017182.1|AF017182 Mus musculus putative transcription ... 701 0.0
gb|AF047043.1|AF047043 Mus musculus Sox-10 protein (Sox10) ... 701 0.0
ref|NM_019193.1| Rattus norvegicus SRY-box containing gene ... 701 0.0
emb|AJ001029.1|RNSOX10 Rattus norvegicus mRNA for Sox10 pro... 701 0.0
gb|BC018551.1|BC018551 Mus musculus, Similar to SRY-box con... 701 0.0
gb|AF047389.1|AF047389 Mus musculus Dominant megacolon muta... 399 0.0
gb|U66141.1|MMU66141 Mus musculus transcription factor Sox-... 536 e-152
gb|AF402677.1|AF402677 Danio rerio HMG-box transcription fa... 507 e-142
dbj|AB035887.1|AB035887 Rana rugosa mRNA for sox9 alpha, co... 461 e-128
gb|AF421878.1|AF421878 Mus musculus SRY sex determining reg... 449 e-124
gb|AF106572.1|AF106572 Alligator mississippiensis SOX9 (SOX... 449 e-124
gb|AY035397.1| Xenopus laevis transcription factor SOX9 mRN... 448 e-124
dbj|AB012236.1|AB012236 Gallus gallus mRNA for SOX9, comple... 446 e-123
gb|BC007951.1|BC007951 Homo sapiens, SRY (sex determining r... 446 e-123
ref|XM_039094.1| Homo sapiens SRY (sex determining region Y... 446 e-123
ref|NM_000346.1| Homo sapiens SRY (sex determining region Y... 446 e-123
emb|Z46629.1|HSSOX9MRN Homo sapiens SOX9 mRNA 446 e-123
gb|AF322900.1|AF322900 Macaca mulatta SOX9 mRNA, complete cds 446 e-123
gb|AF322898.1|AF322898 Pongo pygmaeus SOX9 mRNA, complete cds 446 e-123
gb|AF322897.1|AF322897 Hylobates sp. TIB-201 SOX9 mRNA, com... 446 e-123
gb|AF322899.1|AF322899 Callithrix jacchus SOX9 mRNA, comple... 446 e-123
gb|AF322902.1|AF322902 Pan troglodytes SOX9 mRNA, complete cds 444 e-123
gb|AF217252.1|AF217252 Eublepharis macularius Sox9 (Sox9) m... 443 e-122
gb|AF029696.1|AF029696 Sus scrofa SOX-9 protein mRNA, compl... 439 e-121
gb|U12533.1|GGU12533 Gallus gallus Sox9 transcription facto... 422 e-116
gb|AF378150.1|AF378150 Monopterus albus HMG box transcripti... 410 e-112
dbj|AB006448.1|AB006448 Oncorhynchus mykiss SOX9 mRNA, comp... 409 e-112
gb|AF209872.1|AF209872 Oncorhynchus mykiss SOX9 alpha2 (SOX... 409 e-112
gb|AF277096.1|AF277096 Danio rerio HMG box transcription fa... 397 e-108
gb|AF378151.1|AF378151 Monopterus albus HMG box transcripti... 386 e-105
dbj|D83256.1|ONHSOXP1 Oncorhynchus mykiss mRNA for SoxP1, c... 356 2e-96
gb|AF228664.1|AF228664 Gallus gallus SOX8 transcription fac... 348 5e-94
emb|AL031587.3|HS1039K5 Human DNA sequence from clone RP5-1... 340 2e-91
gb|AF006501.4|AF006501 Homo sapiens chromosome 22q13.1 Cosm... 340 2e-91
gb|AF277097.1|AF277097 Danio rerio HMG box transcription fa... 328 5e-88
ref|NM_014587.1| Homo sapiens SRY (sex determining region Y... 325 4e-87
gb|AF226675.1|AF226675 Homo sapiens transcription factor SO... 325 4e-87
dbj|AB035888.1|AB035888 Rana rugosa mRNA for sox9 beta, com... 289 3e-76
gb|AF061784.1|AF061784 Calotes versicolor Sox9 homolog mRNA... 278 1e-72
ref|XM_027404.3| Homo sapiens similar to SRY (sex determini... 269 5e-70
gb|AF278703.1|AF278703 Bos taurus transcription activator S... 247 1e-63
dbj|AB073720.1|AB073720 Rattus norvegicus mRNA for Sry-rela... 243 3e-62
gb|AF164104.1|AF164104 Homo sapiens transcription factor SO... 227 2e-57
gb|AC007461.8|AC007461 Homo sapiens chromosome 17, clone 84... 206 4e-51
gb|S74506.1|S74504S3 SOX9 [human, fetal brain, Genomic, 149... 206 4e-51
gb|BC004064.1|BC004064 Mus musculus, clone IMAGE:3590584, m... 198 8e-49
gb|AF329945.1|AF329945 Takifugu rubripes SUN-like 1 (SUNL1)... 192 7e-47
dbj|AK024491.1|AK024491 Homo sapiens mRNA for FLJ00094 prot... 178 1e-42
gb|S74504.1|S74504S1 SOX9 [human, fetal brain, Genomic, 979... 174 1e-41
emb|AJ251580.1|DME251580 Drosophila melanogaster mRNA for S... 152 5e-35
gb|AF191325.1|AF191325 Mus musculus SRY-related protein SOX... 152 6e-35
ref|XM_081225.1| Sox100B, mRNA 152 8e-35
gb|AE006465.1|AE006465 Homo sapiens 16p13.3 sequence sectio... 151 1e-34
emb|Z99757.12|HS349H11 Human DNA sequence from clone LA16-3... 151 1e-34
ref|NM_011446.1| Mus musculus SRY-box containing gene 7 (So... 125 6e-27
dbj|AB023419.1|AB023419 Mus musculus mRNA for mSox7, comple... 125 6e-27
dbj|AB063098.1|AB063098 Macaca fascicularis brain cDNA clon... 125 1e-26
dbj|AK004781.1|AK004781 Mus musculus adult male lung cDNA, ... 125 1e-26
ref|NM_011441.1| Mus musculus SRY-box containing gene 17 (S... 125 1e-26
dbj|D49474.1|D49474 Mus musculus mRNA for HMG-box transcrip... 125 1e-26
gb|AF168614.2|AF168614 Danio rerio HMG-box transcription fa... 125 1e-26
dbj|AB052691.1|AB052691 Xenopus laevis mRNA for xSox17alpha... 124 2e-26
emb|AJ001730.1|XLXSOX17A Xenopus laevis mRNA for Xsox17-alp... 123 3e-26
gb|AF193437.1|AF193437 Mus musculus HMG box transcription f... 123 3e-26
dbj|AB052690.1|AB052690 Xenopus laevis mRNA for xSox17alpha... 123 3e-26
dbj|AB073988.1|AB073988 Homo sapiens mRNA for SRY-related H... 123 3e-26
ref|NM_022454.1| Homo sapiens SRY (sex determining region Y... 123 3e-26
dbj|AK025905.1|AK025905 Homo sapiens cDNA: FLJ22252 fis, cl... 123 3e-26
gb|AF107043.1|AF107043 Homo sapiens clone pCL11 DNA-binding... 123 4e-26
emb|AJ006230.1|HSA6230 Homo sapiens sox-14 gene 123 4e-26
gb|AF193436.1|AF193436 Homo sapiens HMG box transcription f... 123 4e-26
gb|AC007159.4|AC007159 Homo sapiens, clone 2_A_4, complete ... 123 4e-26
emb|AL137061.12|AL137061 Human DNA sequence from clone RP11... 122 5e-26
gb|AF107044.1|AF107044 Homo sapiens clone pCL4 DNA-binding ... 122 5e-26
gb|AY069926.1| Mus musculus HMG-box protein (Sox21) mRNA, c... 121 1e-25
gb|AF302936.1|AF302936 Gallus gallus transcription factor S... 121 1e-25
ref|NM_007084.1| Homo sapiens SRY (sex determining region Y... 120 3e-25
dbj|D86075.1|XELDNABPA Xenopus laevis mRNA for DNA-binding ... 120 3e-25
emb|AJ001742.1|XLXSOX17B Xenopus laevis mRNA for Xsox17-bet... 120 3e-25
dbj|D86076.1|XELDNABPB Xenopus laevis mRNA for DNA-binding ... 120 3e-25
dbj|AB026623.1|AB026623 Gallus gallus gene for SOX21, compl... 119 5e-25
gb|AF157388.1|AF157388 Strongylocentrotus purpuratus transc... 119 6e-25
ref|XM_009617.3| Homo sapiens SRY (sex determining region Y... 119 6e-25
ref|NM_006943.1| Homo sapiens SRY (sex determining region Y... 119 6e-25
gb|U35612.1|HSU35612 Homo sapiens SOX22 protein (SOX22) mRN... 119 6e-25
emb|AL034548.25|HS1103G7 Human DNA sequence from clone RP5-... 119 6e-25
ref|NM_004189.1| Homo sapiens SRY (sex determining region Y... 119 8e-25
gb|AF193760.2|AF193760 Gallus gallus HMG box transcription ... 119 8e-25
ref|NM_003107.1| Homo sapiens SRY (sex determining region Y... 119 8e-25
emb|X70683.1|HSSOX4M H.sapiens mRNA for SOX-4 protein 119 8e-25
dbj|AB026622.1|AB026622 Gallus gallus gene for SOX14, compl... 119 8e-25
emb|AL136179.15|AL136179 Human DNA sequence from clone RP3-... 119 8e-25
ref|NM_031439.1| Homo sapiens SRY (sex determining region Y... 118 1e-24
gb|BC004299.1|BC004299 Homo sapiens, Similar to SRY-box con... 118 1e-24
dbj|AK055556.1|AK055556 Homo sapiens cDNA FLJ30994 fis, clo... 118 1e-24
ref|NM_009238.1| Mus musculus SRY-box containing gene 4 (So... 118 1e-24
emb|X70298.1|MMSOX4A M.musculus sox-4 mRNA 118 1e-24
emb|AJ409320.1|HSA409320 Homo sapiens mRNA for SOX7 protein 118 1e-24
gb|BC006612.1|BC006612 Mus musculus, SRY-box containing gen... 118 1e-24
emb|AJ243896.1|HSA243896 Homo sapiens mRNA for SOX18 protein 118 1e-24
dbj|D83650.1|D83650 Xenopus laevis mRNA for XLS13A protein,... 118 1e-24
gb|AF022928.1|AF022928 Xenopus laevis Sry-related HMG facto... 118 1e-24
ref|NM_018419.1| Homo sapiens SRY (sex determining region Y... 118 1e-24
dbj|AB033888.1|AB033888 Homo sapiens SOX18 mRNA, complete cds 118 1e-24
gb|AF270652.1|AF270652 Homo sapiens Sry-related HMG-box pro... 118 1e-24
gb|AF005476.1|AF005476 Xenopus laevis XlSOX-2 (Sox-2) mRNA,... 118 1e-24
dbj|AB052693.1|AB052693 Xenopus laevis mRNA for xSox18beta,... 117 2e-24
ref|NM_079015.1| Drosophila melanogaster Sox box protein 15... 117 2e-24
emb|AJ250955.1|DME250955 Drosophila melanogaster mRNA for S... 117 2e-24
emb|AJ009310.1|XLAJ9310 Xenopus laevis cDNA clone 30F5-2 117 2e-24
ref|XM_080594.1| Sox box protein 15, mRNA 117 2e-24
gb|U85091.1|DRU85091 Danio rerio transcriptional regulator ... 117 2e-24
emb|AJ237813.1|DRE237813 Danio rerio mRNA for Sox 11b protein 117 2e-24
gb|AF193435.1|AF193435 Mus musculus HMG box transcription f... 117 2e-24
ref|NM_009236.1| Mus musculus SRY-box containing gene 18 (S... 117 2e-24
gb|L35032.1|MUSSOX18TF Mouse HMG-box transcription factor (... 117 2e-24
dbj|AB052692.1|AB052692 Xenopus laevis mRNA for xSox18alpha... 116 4e-24
emb|Y07542.1|XLSOX3PRT X.laevis mRNA for SOX3 protein 116 4e-24
dbj|D87209.1|D87209 Xenopus laevis mRNA for XLS13B protein,... 116 4e-24
gb|U12532.1|GGU12532 Gallus gallus Sox2 transcription facto... 116 5e-24
emb|X96997.1|OASOX2GEN O.aries SOX-2 gene 116 5e-24
emb|AJ324649.1|HSA324649 Homo sapiens genomic sequence surr... 116 5e-24
gb|BC013923.1|BC013923 Homo sapiens, Similar to SRY-box con... 116 5e-24
gb|U31967.1|MMU31967 Mus musculus high mobility group box p... 116 5e-24
gb|L07335.1|HUMHMGBOX Homo sapiens (clone 6AR33) HMG box mR... 116 5e-24
ref|NM_011443.1| Mus musculus SRY-box containing gene 2 (So... 116 5e-24
emb|X94127.1|MMSOX2 M.musculus SOX2 gene 116 5e-24
dbj|D50603.1|CHKSOX2 Chicken mRNA for SOX-2, complete cds 116 5e-24
dbj|AB010741.1|AB010741 Oncorhynchus mykiss mRNA for rtSox2... 116 5e-24
emb|AJ327010.1|HSA327010 Homo sapiens genomic sequence surr... 116 5e-24
emb|Z31560.1|HSSOX2G H.sapiens sox-2 mRNA (partial) 116 5e-24
gb|AF101266.1|AF101266 Danio rerio DNA binding protein (sox... 115 7e-24
dbj|D83649.1|D83649 Xenopus laevis mRNA for xSox7 protein, ... 115 7e-24
gb|U85092.1|DRU85092 Danio rerio transcriptional regulator ... 115 7e-24
emb|Z18959.1|MMSOX10 M.musculus mRNA for Sox 10 (partial) 115 7e-24
emb|AJ237812.1|DRE237812 Danio rerio mRNA for Sox 11a prote... 115 9e-24
gb|AY058313.1| Drosophila melanogaster GH07353 full length ... 115 9e-24
gb|U85090.1|DRU85090 Danio rerio transcriptional regulator ... 115 9e-24
emb|AJ245396.1|OLA245396 Oryzias latipes mRNA for SOX3 protein 115 1e-23
emb|AJ335474.1|HSA335474 Homo sapiens genomic sequence surr... 115 1e-23
emb|Z18958.1|MMSOX9 M.musculus mRNA for Sox 9 (partial) 115 1e-23
gb|U70441.1|MMU70441 Mus musculus Sox10 (Sox10) mRNA, parti... 115 1e-23
emb|AL591389.5| Zebrafish DNA sequence from clone XX-202L16... 114 2e-23
dbj|AB012237.1|AB012237 Gallus gallus mRNA for SOX11, compl... 114 2e-23
gb|L12022.1|CDSCSDJ Chelydra serpentina sex determining sra... 114 2e-23
gb|AF157389.3|AF157389 Strongylocentrotus purpuratus transc... 114 2e-23
gb|U12534.1|GGU12534 Gallus gallus Sox11 transcription fact... 114 2e-23
dbj|AB028641.1|AB028641 Homo sapiens mRNA for SOX11, comple... 114 3e-23
ref|NM_003108.1| Homo sapiens SRY (sex determining region Y... 114 3e-23
gb|U23752.1|HSU23752 Human SOX-11 mRNA, complete cds 114 3e-23
gb|AF186844.1|AF186844 Xenopus laevis transcription factor ... 114 3e-23
ref|NM_005986.1| Homo sapiens SRY (sex determining region Y... 114 3e-23
emb|AL138691.15|AL138691 Human DNA sequence from clone RP11... 114 3e-23
ref|NM_053349.1| Rattus norvegicus SRY-box containing gene ... 114 3e-23
emb|AJ004858.1|RNAJ4858 Rattus norvegicus mRNA for Sry-rela... 114 3e-23
emb|Y13436.1|HSSOX1 Homo sapiens sox1 gene 114 3e-23
emb|AJ336098.1|HSA336098 Homo sapiens genomic sequence surr... 114 3e-23
emb|X94126.1|MMSOX1 M.musculus SOX1 gene 114 3e-23
ref|XM_027553.1| Homo sapiens SRY (sex determining region Y... 114 3e-23
ref|NM_009233.1| Mus musculus SRY-box containing gene 1 (So... 114 3e-23
gb|BC000985.2|BC000985 Homo sapiens, SRY (sex determining r... 113 3e-23
gb|AC005416.1|AC005416 Drosophila melanogaster DNA sequence... 113 3e-23
gb|AC093045.1| Drosophila melanogaster, chromosome 2L, regi... 113 3e-23
gb|AE003622.3|AE003622 Drosophila melanogaster genomic scaf... 113 3e-23
dbj|AK027742.1|AK027742 Homo sapiens cDNA FLJ14836 fis, clo... 113 3e-23
gb|AC007421.12|AC007421 Homo sapiens chromosome 17, clone h... 113 3e-23
ref|NM_079996.1| Drosophila melanogaster SoxNeuro (SoxN), mRNA 113 3e-23
ref|XM_078951.1| SoxNeuro, mRNA 113 3e-23
emb|AJ252124.1|DME252124 Drosophila melanogaster mRNA for S... 113 3e-23
ref|NM_006942.1| Homo sapiens SRY (sex determining region Y... 113 3e-23
dbj|AB006867.1|AB006867 Homo sapiens mRNA for hSOX20 protei... 113 3e-23
dbj|AB011802.1|AB011802 Gallus gallus mRNA for SOX1, comple... 113 4e-23
ref|NM_078038.1| sex-determining protein SOX3 like 113 4e-23
emb|Z18957.1|MMSOX8 M.musculus mRNA for Sox 8 (partial) 113 4e-23
emb|X96419.1|DMSOXDOMN D.melanogaster mRNA for SOX-domain p... 112 6e-23
gb|AC069457.5| Drosophila melanogaster 3L BAC RP98-16J19 (R... 112 6e-23
gb|U68056.1|DMU68056 Drosophila melanogaster SOX HMG domain... 112 6e-23
gb|AE003535.2|AE003535 Drosophila melanogaster genomic scaf... 112 6e-23
gb|AC010573.3| Drosophila melanogaster 3L BAC RPCI98-2M13 (... 112 6e-23
ref|NM_079342.1| Drosophila melanogaster Dichaete (D), mRNA 112 6e-23
emb|X79250.1|HMASOX3 H.momus (Ascidian) Asox3 mRNA 112 6e-23
dbj|AB011803.1|AB011803 Gallus gallus mRNA for SOX3, comple... 112 1e-22
gb|U12467.1|GGU12467 Gallus gallus Sox3 transcription facto... 111 1e-22
gb|M86315.1|ALLAES4 Alligator AES4 gene, partial cds 111 1e-22
ref|NM_009234.1| Mus musculus SRY-box containing gene 11 (S... 111 2e-22
gb|AF009414.1|AF009414 Mus musculus SOX11 (Sox11) mRNA, com... 111 2e-22
dbj|AB014474.1|AB014474 Mus musculus Sox15 gene, complete cds 110 2e-22
emb|AL603707.5|AL603707 Mouse DNA sequence from clone RP23-... 110 3e-22
ref|NM_076860.1| sex-determining protein SRY 110 3e-22
ref|NM_059144.1| HMG-box containing protein 110 3e-22
dbj|AB039223.1|AB039223 Mus spicilegus Sox15 gene for HMG-b... 110 3e-22
dbj|AB039222.1|AB039222 Mus musculus Sox15 gene for HMG-box... 110 3e-22
dbj|AB039221.1|AB039221 Mus musculus Sox15 gene for HMG-box... 110 3e-22
dbj|AB039220.1|AB039220 Mus musculus Sox15 gene for HMG-box... 110 3e-22
dbj|AB039219.1|AB039219 Mus musculus Sox15 gene for HMG-box... 110 3e-22
dbj|AB039218.1|AB039218 Mus musculus Sox15 gene for HMG-box... 110 3e-22
dbj|AB039217.1|AB039217 Mus musculus Sox15 gene for HMG-box... 110 3e-22
dbj|AB039216.1|AB039216 Mus musculus Sox15 gene for HMG-box... 110 3e-22
dbj|AB039215.1|AB039215 Mus musculus Sox15 gene for HMG-box... 110 3e-22
dbj|AB039214.1|AB039214 Mus musculus Sox15 gene for HMG-box... 110 3e-22
gb|AF182945.1|AF182945 Mus musculus SOX15 (Sox15) mRNA, com... 110 3e-22
gb|M86313.1|ALLAES1DNA Alligator AES1 gene, partial cds 110 4e-22
emb|X94125.1|MMSOX3 M.musculus SOX3 gene 109 5e-22
gb|L12013.1|CDSCSDE Chelydra serpentina sex determining sra... 109 5e-22
gb|AF434675.1|AF434675 Mus musculus transcription factor SO... 109 5e-22
ref|NM_009237.1| Mus musculus SRY-box containing gene 3 (So... 109 5e-22
emb|X79821.1|DRZFSOX19 D.rerio Zf Sox 19 mRNA 109 5e-22
ref|NM_005634.1| Homo sapiens SRY (sex determining region Y... 109 6e-22
ref|XM_010069.2| Homo sapiens SRY (sex determining region Y... 109 6e-22
gb|AF264713.1|AF264713 Homo sapiens sex determining region ... 109 6e-22
emb|AJ322962.1|HSA322962 Homo sapiens genomic sequence surr... 109 6e-22
emb|AL121875.10|HSBA51C14 Human DNA sequence from clone RP1... 109 6e-22
emb|X71135.1|HSSOX3 H.sapiens sox3 gene 109 6e-22
gb|S69429.1|S69429 testis-determining gene/SRY homolog [Smi... 108 8e-22
emb|AJ252125.1|DME252125 Drosophila melanogaster mRNA for S... 108 1e-21
gb|AF271787.1|AF271787 Branchiostoma floridae HMG box trans... 108 1e-21
gb|U76522.1|PGU76522 Petrogale godmani sex determining regi... 108 1e-21
gb|U76521.1|PSU76521 Petrogale sharmani sex determining reg... 108 1e-21
gb|U76520.1|PIU76520 Petrogale inornata sex determining reg... 108 1e-21
gb|U76519.1|PHU76519 Petrogale herberti sex determining reg... 108 1e-21
gb|U76517.1|PLU76517 Petrogale lateralis purpureicollis sex... 108 1e-21
gb|U76516.1|PXU76516 Petrogale xanthopus xanthopus sex dete... 108 1e-21
gb|U76515.1|PAU76515 Petrogale assimilis sex determining re... 108 1e-21
gb|U76514.1|PCU76514 Petrogale coenensis sex determining re... 108 1e-21
gb|U76513.1|PMU76513 Petrogale mareeba sex determining regi... 108 1e-21
gb|U76512.1|PXU76512 Petrogale xanthopus celeris sex determ... 108 1e-21
gb|U76511.1|PBU76511 Petrogale brachyotis sex determining r... 108 1e-21
gb|U76510.1|PBU76510 Petrogale burbidgei sex determining re... 108 1e-21
ref|NM_057546.1| Drosophila melanogaster Sox box protein 14... 108 1e-21
emb|AJ404687.1|DRE404687 Danio rerio mRNA for Sox31 protein 108 1e-21
emb|X71136.1|HSSOXA H.sapiens mRNA for soxA 108 1e-21
gb|U76518.1|PPU76518 Petrogale penicillata sex determining ... 107 3e-21
gb|M86338.1|TELMG43DNA Gecko MG43 gene, partial cds 107 3e-21
gb|L12020.1|CDSCSDH Chelydra serpentina sex determining sra... 106 5e-21
gb|M86337.1|TELMG42DNA Gecko MG42 gene, partial cds 105 7e-21
gb|M86312.1|ALLADW5DNA Alligator ADW5 gene, partial cds 105 7e-21
dbj|AB004572.1|AB004572 Equus caballus mRNA for sex-determi... 105 9e-21
gb|M86310.1|ALLADW2DNA Alligator ADW2 gene, partial cds 105 9e-21
ref|NG_000580.1| Drosophila melanogaster Peptidylglycine-al... 105 1e-20
gb|AC099018.1| Drosophila melanogaster, chromosome 2R, regi... 105 1e-20
gb|S46279.1|S46279 SRY homolog [Sminthopsis macroura=marsup... 105 1e-20
ref|NG_000302.1| Drosophila melanogaster Sox box protein 14... 105 1e-20
gb|AE003462.1|AE003462 Drosophila melanogaster genomic scaf... 105 1e-20
gb|AC004642.1|AC004642 Drosophila melanogaster DNA sequence... 105 1e-20
gb|M86314.1|ALLAES2DNA Alligator AES2 gene, partial cds 104 2e-20
gb|AF274872.1|AF274872 Rattus norvegicus sex-determining re... 104 2e-20
gb|L29545.1|RATSDPA Rattus exulans sex-determing protein ge... 104 2e-20
gb|AY057745.1| Mus minutoides sex-determining protein (Sry)... 103 3e-20
gb|L29541.1|HMYSDPA Hylomyscus alleni sex determining prote... 103 3e-20
emb|X67204.1|MMSRYLOC Mus musculus Sry gene for sex determi... 103 4e-20
emb|X55491.1|MMSRYA M.musculus Sry gene 103 4e-20
ref|NM_011564.1| Mus musculus sex determining region of Chr... 103 4e-20
gb|U70656.1|MMU70656 Mus musculus sex determining protein (... 103 4e-20
gb|U70655.1|MMU70655 Mus musculus sex determining protein (... 103 4e-20
gb|U80799.1|MRU80799 Macropus rufus sex-determining region ... 103 4e-20
gb|U80798.1|MGU80798 Macropus giganteus sex-determining reg... 103 4e-20
gb|U80797.1|MAU80797 Macropus agilis sex-determining region... 103 4e-20
gb|AY027650.1| Danio rerio casanova mRNA, complete cds 102 6e-20
gb|M86316.1|ALLAES6DNA Alligator AES6 gene, partial cds 102 6e-20
gb|L29546.1|SYSSDPA Stochomys longicaudatus sex-determing p... 102 6e-20
dbj|AB071895.1|AB071895 Danio rerio mRNA for sox transcript... 102 6e-20
gb|AF362749.1|AF362749 Danio rerio casanova (cas) mRNA, com... 102 6e-20
gb|AF009520.1|AF009520 Mus spicilegus sex determining prote... 102 8e-20
gb|U70654.1|MMU70654 Mus musculus musculus sex determining ... 102 8e-20
gb|U70649.1|MMU70649 Mus musculus domesticus sex determinin... 102 8e-20
gb|U70648.1|MMU70648 Mus musculus domesticus sex determinin... 102 8e-20
gb|U70647.1|MMU70647 Mus musculus domesticus sex determinin... 102 8e-20
gb|U70645.1|MMU70645 Mus musculus domesticus sex determinin... 102 8e-20
gb|U70642.1|MMU70642 Mus musculus domesticus sex determinin... 102 8e-20
gb|AF068054.1|AF068054 Mus musculus domesticus strain B6-YT... 102 8e-20
gb|AF337050.1|AF337050 Mus musculus domesticus strain B6JEi... 102 8e-20
gb|U03645.1|MMU03645 Mus musculus domesticus Torino (Sry) g... 102 8e-20
gb|M86311.1|ALLADW4DNA Alligator ADW4 gene, partial cds 102 8e-20
gb|AF337049.1|AF337049 Mus musculus domesticus strain B6JEi... 102 8e-20
gb|AF337044.1|AF337044 Mus musculus domesticus strain WSB/E... 102 8e-20
gb|U70659.1|MSU70659 Mus spretus sex determining protein (S... 102 8e-20
gb|U70658.1|MHU70658 Mus hortulanus sex determining protein... 102 8e-20
emb|X60687.1|MMSRYDNA M.musculus Sry DNA 102 8e-20
gb|AF009521.1|AF009521 Mus spretus sex determining protein ... 102 8e-20
gb|U70652.1|MMU70652 Mus musculus musculus sex determining ... 102 8e-20
gb|U70650.1|MMU70650 Mus musculus domesticus sex determinin... 102 8e-20
gb|AF337043.1|AF337043 Mus musculus domesticus strain LEWES... 102 8e-20
gb|AF070933.1|AF070933 Mus musculus domesticus strain B6-YF... 102 8e-20
gb|L29551.1|MUSSRYG Mus musculus domesticus Y-linked sex de... 102 8e-20
gb|L29550.1|MUSSRYE Mus spicilegus Y-linked sex determining... 102 8e-20
gb|L29547.1|MUSSRYA Mus macedonicus Y-linked sex determinin... 102 8e-20
gb|L29544.1|MUSSDPB Mus spretus sex-determing protein gene,... 102 8e-20
gb|AF009519.1|AF009519 Mus musculus domesticus sex determin... 102 8e-20
gb|U70651.1|MMU70651 Mus musculus musculus sex determining ... 102 8e-20
gb|U70646.1|MMU70646 Mus musculus domesticus sex determinin... 102 8e-20
gb|AF337048.1|AF337048 Mus musculus domesticus strain B6JEi... 102 8e-20
gb|U70657.1|MMU70657 Mus musculus castaneus sex determining... 102 8e-20
gb|U70644.1|MMU70644 Mus musculus domesticus sex determinin... 102 8e-20
gb|U70641.1|MMU70641 Mus musculus domesticus sex determinin... 102 8e-20
gb|AF337047.1|AF337047 Mus musculus domesticus strain B6JEi... 102 8e-20
gb|U70643.1|MMU70643 Mus musculus sex determining protein (... 102 8e-20
gb|AF068053.1|AF068053 Mus musculus domesticus strain B6-YA... 102 8e-20
gb|U70653.1|MMU70653 Mus musculus musculus sex determining ... 102 8e-20
gb|AF337046.1|AF337046 Mus musculus domesticus strain B6JEi... 102 8e-20
gb|AF337045.1|AF337045 Mus musculus domesticus strain B6JEi... 102 8e-20
gb|M86339.1|TELMG44 Gecko MG44 gene, partial cds 102 1e-19
gb|L29542.1|MYSSDPA Mastomys hildibrantii sex-determining p... 102 1e-19
gb|AF275682.1|AF275682 Rattus norvegicus sex-determining re... 102 1e-19
gb|L29552.1|MUSSRYF Mus caroli Y-linked sex determining (Sr... 102 1e-19
gb|L29549.1|MUSSRYD Mus cookii Y-linked sex determining (Sr... 102 1e-19
gb|L29548.1|MUSSRYB Mus cervicolor Y-linked sex determining... 102 1e-19
gb|AC010916.8| Drosophila melanogaster, chromosome 4, regio... 101 1e-19
emb|AJ009298.1|XLAJ9298 Xenopus laevis cDNA clone 24A9-2 101 1e-19
dbj|AB013896.1|AB013896 Xenopus laevis mRNA for SOX-D, comp... 101 1e-19
gb|AE003847.2|AE003847 Drosophila melanogaster genomic scaf... 101 1e-19
gb|AF107021.1|AF107021 Canis familiaris sex determining reg... 101 1e-19
gb|M86336.1|EULLG28DNA Eublepharis macularius LG28 gene, 5'... 101 1e-19
gb|L12021.1|CDSCSDI Chelydra serpentina sex determining sra... 101 2e-19
gb|L29543.1|MUSSDPA Mus pahari sex-determining protein gene... 101 2e-19
gb|AF182357.1|AF182357 Mus musculus SOX14 protein (Sox14) g... 100 2e-19
emb|X71137.1|HSSOXB H.sapiens mRNA for soxB 100 3e-19
emb|X89730.1|RNSRYGENE R.norvegicus DNA for Sry gene (partial) 100 4e-19
emb|X65657.1|MMSOX5 M.musculus (testis) Sox-5 mRNA 100 4e-19
emb|AJ010604.1|MMU010604 Mus musculus mRNA for transcriptio... 100 4e-19
dbj|AK074317.1| Homo sapiens cDNA FLJ23737 fis, clone HEP14... 100 4e-19
ref|NM_006940.1| Homo sapiens SRY (sex determining region Y... 100 4e-19
gb|S83308.1|S83308 SOX5=Sry-related HMG box gene {alternati... 100 4e-19
ref|NM_011444.1| Mus musculus SRY-box containing gene 5 (So... 100 4e-19
dbj|AB006330.1|AB006330 Mus musculus mSox5L mRNA, complete cds 100 4e-19
gb|AF157387.1|AF157387 Strongylocentrotus purpuratus transc... 100 5e-19
ref|NM_076554.1| Caenorhabditis elegans 99 6e-19
gb|AF097319.1|AF097319 Caenorhabditis elegans Sox domain pr... 99 6e-19
gb|AF148463.1|AF148463 Bos grunniens sex determining region... 99 6e-19
gb|AF148462.1|AF148462 Bos taurus sex determining region Y ... 99 6e-19
dbj|D61688.1|ONHSOXLZ Rainbow trout mRNA for SOX-LZ, comple... 99 8e-19
gb|AF230075.1|AF230075 Lepus europaeus sex-determining regi... 99 1e-18
gb|U49860.1|SSU49860 Sus scrofa SRY protein (SRY) gene, com... 99 1e-18
emb|Z30646.1|CHSEDERY C.hircus SRY gene for sex determining... 99 1e-18
emb|X86386.1|CJDNASRY C.jacchus SRY gene 98 2e-18
gb|AF454966.1|AF454966 Pygathrix bieti SRY gene, partial cds 98 2e-18
emb|Z30265.1|OADSRYC O.aries sry gene for sex determining r... 97 2e-18
emb|X86380.1|PTDNASRY P.troglodytes SRY gene 97 3e-18
gb|AF006571.1|AF006571 Sus scrofa Sry-related gene 9 (SOX9)... 97 4e-18
gb|AF284331.2|AF284331 Allenopithecus nigroviridis SRY (SRY... 97 4e-18
emb|AL136780.1|HSM801748 Homo sapiens mRNA; cDNA DKFZp434N1... 96 5e-18
ref|NM_033326.1| Homo sapiens SRY (sex determining region Y... 96 5e-18
gb|AF309034.1|AF309034 Homo sapiens SOX6 mRNA, complete cds 96 5e-18
dbj|D61689.1|MUSSOXLZ2 Mouse mRNA for SOX-LZ, complete cds 96 5e-18
gb|AF116571.1|AF116571 Homo sapiens SRY-like DNA binding pr... 96 5e-18
gb|BC007130.1|BC007130 Mus musculus, Similar to SRY-box con... 96 5e-18
ref|NM_011439.1| Mus musculus SRY-box containing gene 13 (S... 96 5e-18
emb|AJ000740.1|MMAJ740 Mus Musculus mRNA for HMG-box transc... 96 5e-18
dbj|AB006329.1|AB006329 Mus musculus mSox13 mRNA, complete cds 96 5e-18
gb|AF284332.2|AF284332 Cercopithecus mona SRY (SRY) gene, p... 96 5e-18
gb|AF284327.2|AF284327 Macaca thibetana SRY (SRY) gene, par... 96 5e-18
gb|AF284295.2|AF284295 Macaca assamensis SRY (SRY) gene, pa... 96 5e-18
gb|AF284282.2|AF284282 Presbytis melalophos SRY (SRY) gene,... 96 5e-18
ref|XM_010627.5| Homo sapiens SRY (sex determining region Y... 96 5e-18
gb|AF083105.1|AF083105 Homo sapiens HMG box factor SOX-13 m... 96 5e-18
emb|AJ010605.1|MMU010605 Mus musculus mRNA for transcriptio... 96 5e-18
dbj|AB046700.1|AB046700 Cervus nippon Sry gene for sex-dete... 96 5e-18
dbj|D50552.1|XELXSOX12 Xenopus laevis xSox12 mRNA for XSOX1... 96 5e-18
ref|NM_011445.1| Mus musculus SRY-box containing gene 6 (So... 96 5e-18
ref|NM_005686.1| Homo sapiens SRY (sex determining region Y... 96 5e-18
gb|AF098915.1|AF098915 Homo sapiens type 1 diabetes autoant... 96 5e-18
gb|U32614.1|MMU32614 Mus musculus SOX6 (Sox6) mRNA, complet... 96 5e-18
ref|XM_033187.1| Homo sapiens Sox-6 (HSSOX6), mRNA 96 5e-18
gb|AF454970.1|AF454970 Macaca nemestrina SRY gene, partial cds 96 5e-18
gb|AF454969.1|AF454969 Macaca mulatta SRY gene, partial cds 96 5e-18
gb|AF454968.1|AF454968 Mandrillus leucophaeus SRY gene, par... 96 5e-18
gb|AF454967.1|AF454967 Macaca fascicularis SRY gene, partia... 96 5e-18
emb|X86385.1|PSPDNASRY Papio sp. SRY gene 96 5e-18
gb|AF425296.1| Macaca sylvanus isolate #1076 sex-determinin... 96 5e-18
gb|AF284330.2|AF284330 Mandrillus sphinx SRY (SRY) gene, pa... 96 5e-18
gb|AF284329.2|AF284329 Theropithecus gelada SRY (SRY) gene,... 96 5e-18
gb|AF284328.2|AF284328 Papio hamadryas SRY (SRY) gene, part... 96 5e-18
gb|AF284326.2|AF284326 Macaca sylvanus isolate 201 SRY (SRY... 96 5e-18
gb|AF284325.2|AF284325 Macaca sylvanus isolate 04 SRY (SRY)... 96 5e-18
gb|AF284324.2|AF284324 Macaca sinica isolate 979 SRY (SRY) ... 96 5e-18
gb|AF284323.2|AF284323 Macaca silenus isolate 20382 SRY (SR... 96 5e-18
gb|AF284322.2|AF284322 Macaca radiata isolate 3033 SRY (SRY... 96 5e-18
gb|AF284321.2|AF284321 Macaca radiata isolate 3028 SRY (SRY... 96 5e-18
gb|AF284317.2|AF284317 Macaca nemestrina isolate Thai.1A SR... 96 5e-18
gb|AF284316.2|AF284316 Macaca nemestrina isolate pagensis.9... 96 5e-18
gb|AF284315.2|AF284315 Macaca nemestrina isolate pagensis.8... 96 5e-18
gb|AF284314.2|AF284314 Macaca nemestrina isolate #1.KIZ.2 S... 96 5e-18
gb|AF284313.2|AF284313 Macaca nemestrina isolate #12.KIZ.17... 96 5e-18
gb|AF284294.2|AF284294 Macaca arctoides isolate Hanoi.05.2 ... 96 5e-18
gb|AF284293.2|AF284293 Macaca arctoides isolate Thai.2A SRY... 96 5e-18
gb|AF284292.2|AF284292 Macaca arctoides isolate St0316 SRY ... 96 5e-18
gb|AF284291.2|AF284291 Macaca arctoides isolate 101.Malaya ... 96 5e-18
gb|AF284290.2|AF284290 Macaca nemestrina isolate PM665.E.Bo... 96 5e-18
gb|AF284289.2|AF284289 Macaca nemestrina isolate SUKA.NE.Bo... 96 5e-18
gb|AF284288.2|AF284288 Macaca silenus isolate 108806 SRY (S... 96 5e-18
gb|AF284285.2|AF284285 Macaca sinica isolate 716 SRY (SRY) ... 96 5e-18
gb|AF284284.2|AF284284 Macaca sinica isolate 985 SRY (SRY) ... 96 5e-18
gb|AF454973.1|AF454973 Macaca arctoides SRY gene, partial cds 96 7e-18
gb|AF425291.1| Macaca mulatta isolate #16805 sex-determinin... 96 7e-18
gb|AF425290.1| Macaca fuscata isolate #13751 sex-determinin... 96 7e-18
gb|AF425289.1| Macaca cyclopis isolate #1 sex-determining f... 96 7e-18
gb|AF425288.1| Macaca fascicularis isolate #791.Tum Chompol... 96 7e-18
gb|AF425287.1| Macaca fascicularis isolate #4 sex-determini... 96 7e-18
gb|AF425286.1| Macaca fascicularis isolate #3 sex-determini... 96 7e-18
gb|AF425285.1| Macaca fascicularis isolate #289.WB sex-dete... 96 7e-18
gb|AF425284.1| Macaca fascicularis isolate #4 sex-determini... 96 7e-18
gb|AF425283.1| Macaca fascicularis isolate #3 sex-determini... 96 7e-18
gb|AF425282.1| Macaca fascicularis isolate #2 sex-determini... 96 7e-18
gb|AF284320.2|AF284320 Macaca ochreata SRY (SRY) gene, part... 96 7e-18
gb|AF284319.2|AF284319 Macaca nigrescens SRY (SRY) gene, pa... 96 7e-18
gb|AF284318.2|AF284318 Macaca nigra SRY (SRY) gene, partial... 96 7e-18
gb|AF284312.2|AF284312 Macaca mulatta isolate India.944D SR... 96 7e-18
gb|AF284311.2|AF284311 Macaca mulatta isolate India.92B.560... 96 7e-18
gb|AF284310.2|AF284310 Macaca mulatta isolate China.20156 S... 96 7e-18
gb|AF284309.2|AF284309 Macaca mulatta isolate Burma.23269 S... 96 7e-18
gb|AF284308.2|AF284308 Macaca maura SRY (SRY) gene, partial... 96 7e-18
gb|AF284307.2|AF284307 Macaca hecki SRY (SRY) gene, partial... 96 7e-18
gb|AF284306.2|AF284306 Macaca fuscata isolate 22086 SRY (SR... 96 7e-18
gb|AF284304.2|AF284304 Macaca fascicularis isolate Vietnam.... 96 7e-18
gb|AF284301.2|AF284301 Macaca fascicularis isolate Thai.1B ... 96 7e-18
gb|AF284296.2|AF284296 Macaca cyclopis SRY (SRY) gene, part... 96 7e-18
gb|AF284287.2|AF284287 Macaca tonkeana isolate PM558.N.clad... 96 7e-18
gb|AF284286.2|AF284286 Macaca tonkeana isolate PM604.H.clad... 96 7e-18
gb|AF284305.2|AF284305 Macaca fuscata isolate 22082 SRY (SR... 96 7e-18
dbj|AB039748.1|AB039748 Bos taurus gene for testis determin... 96 7e-18
gb|AF461767.1|AF461767 Muntiacus reevesi sex-determining re... 96 7e-18
gb|AF425295.1| Macaca fascicularis isolate #668.Songkhla se... 96 7e-18
gb|AF425294.1| Macaca fascicularis isolate UKM.004 sex-dete... 96 7e-18
gb|AF425293.1| Macaca fascicularis isolate UKM.003 sex-dete... 96 7e-18
gb|AF425292.1| Macaca fascicularis isolate Johor.DJ.95 sex-... 96 7e-18
gb|AF284303.2|AF284303 Macaca fascicularis isolate Java.34 ... 96 7e-18
gb|AF284302.2|AF284302 Macaca fascicularis isolate Borneo.P... 96 7e-18
gb|AF284300.2|AF284300 Macaca fascicularis isolate Sepilok ... 96 7e-18
gb|AF284299.2|AF284299 Macaca fascicularis isolate Sarawak ... 96 7e-18
gb|AF284298.2|AF284298 Macaca fascicularis isolate phillipi... 96 7e-18
gb|U15569.1|BTU15569 Bos taurus sex determining region Y pr... 96 7e-18
gb|AF284297.2|AF284297 Macaca fascicularis isolate DM2687 S... 96 7e-18
emb|Z30327.1|BTSDRYG B.taurus sry gene for sex-determining ... 96 7e-18
emb|Z30321.1|BBSDRYG B.bonasus sry gene encoding sex-determ... 96 7e-18
gb|AF461765.1|AF461765 Elaphodus cephalophus sex-determinin... 96 9e-18
dbj|AB007906.1|AB007906 Oncorhynchus mykiss mRNA for rtSox2... 96 9e-18
gb|AF461766.1|AF461766 Muntiacus crinifrons sex-determining... 95 1e-17
emb|Z48513.1|HSXGPEP7 H.sapiens XG mRNA (clone PEP7) 95 1e-17
gb|L08063.1|HUMSRYZ Homo sapiens sex determination protein ... 95 1e-17
gb|AF284283.2|AF284283 Trachypithecus cristatus SRY (SRY) g... 95 1e-17
emb|X86382.1|GGDNASRY G.gorilla SRY gene 95 1e-17
emb|X53772.1|HSSRY H.sapiens SRY gene 95 1e-17
gb|L10101.1|HUMSRYA Homo sapiens sex-determining region Y (... 95 1e-17
gb|AF000024.1|CPAF000024 Carica papaya sex-determining regi... 95 1e-17
emb|AJ328238.1|HSA328238 Homo sapiens genomic sequence surr... 95 1e-17
gb|AC006040.3|AC006040 Homo sapiens BAC clone RP11-400O10 f... 95 1e-17
ref|NM_003140.1| Homo sapiens sex determining region Y (SRY... 95 1e-17
emb|X96421.1|HSCAMF3X1 H.sapiens Y chromosome cosmid cAMF3.... 95 1e-17
gb|L10102.1|HUMSRYB Homo sapiens sex-determining region Y (... 95 1e-17
emb|X86383.1|PPSRYDNA P.pygmaeus SRY gene 95 2e-17
gb|AF322901.1|AF322901 Macaca mulatta SRY mRNA, complete cds 95 2e-17
emb|X86381.1|PPDNASRY P.paniscus SRY gene 95 2e-17
gb|L29086.1|MUSSOX18A Mus musculus HMG-box transcription fa... 94 2e-17
emb|AJ421270.1|HSA421270 Homo sapiens partial mRNA for sex ... 94 2e-17
emb|X86384.1|HSDNASRY H.lar SRY gene 94 3e-17
emb|X98344.1|CVSOX4 C.versicolor sox-4 gene, partial 94 4e-17
ref|XM_087861.1| Homo sapiens similar to SRY (sex determini... 93 5e-17
gb|L12011.1|CDSCSDC Chelydra serpentina sex determining sra... 85 9e-17
gb|L12010.1|CDSCSDB Chelydra serpentina sex determining sra... 83 9e-17
gb|S53156.1|S53156 SRY (SRYF109S)=testis-determining factor... 92 1e-16
gb|AF454972.1|AF454972 Pygathrix nemaeus SRY gene, partial cds 92 1e-16
gb|M86335.1|EULLG27DNA Eublepharis macularius LG27 gene, 5'... 92 1e-16
gb|AY007301.1| Muntiacus muntjak muntjak sex-determining re... 91 2e-16
gb|L12014.1|CDSCSDF Chelydra serpentina sex determining sra... 83 2e-16
gb|S56543.1|S56543 SRY=male gonadal sex-determining locus [... 91 2e-16
gb|AF454971.1|AF454971 Trachypithecus phayrei SRY gene, par... 91 3e-16
gb|AF454965.1|AF454965 Trachypithecus francoisi SRY gene, p... 91 3e-16
gb|AF180946.1|AF180946 Elephas maximus SRY protein gene, pa... 91 3e-16
gb|U41508.2| Caenorhabditis elegans cosmid W01C8, complete ... 90 4e-16
gb|U64608.2|U64608 Caenorhabditis elegans cosmid T22B7, com... 90 4e-16
gb|U80032.1| Caenorhabditis elegans cosmid C32E12, complete... 90 4e-16
gb|AC084550.1|CBRG33D04 Caenorhabditis briggsae cosmid G33D... 90 5e-16
gb|AF103878.1|AF103878 Trichosurus vulpecula sex-determinin... 89 1e-15
emb|Z69792.1|CEF40E10 Caenorhabditis elegans cosmid F40E10,... 79 2e-15
gb|AC104703.1| Drosophila melanogaster 3L BAC RP98-35M1 (Ro... 87 3e-15
gb|L12012.1|CDSCSDD Chelydra serpentina sex determining sra... 87 4e-15
ref|NM_076203.1| Caenorhabditis elegans 86 7e-15
gb|L12015.1|CDSCSDG Chelydra serpentina sex determining sra... 85 1e-14
gb|L29085.1|MUSSOX17A Mus musculus HMG-box transcription fa... 85 1e-14
gb|S74505.1|S74504S2 SOX9 [human, fetal brain, Genomic, 294... 83 6e-14
ref|NM_007017.1| Homo sapiens SRY (sex determining region Y... 82 8e-14
dbj|AB022441.1|AB022441 Homo sapiens mRNA for Sox30 protein... 82 8e-14
dbj|AB064989.1|AB064989 Macaca fascicularis mRNA for SOX30 ... 82 8e-14
dbj|AB022083.1|AB022083 Homo sapiens mRNA for SOX30 protein... 82 8e-14
ref|XM_003763.5| Homo sapiens SRY (sex determining region Y... 82 8e-14
emb|X73038.1|HSSOX11 H.sapiens SOX-11 gene 81 2e-13
emb|X73039.1|HSSOX12 H.sapiens SOX-12 gene 81 2e-13
emb|Z23089.1|LFSOXLF5 L.fuscus sox gene (partial) 79 7e-13
emb|Z23087.1|LFSOXLF4 L.fuscus sox gene (partial) 79 7e-13
gb|AC008220.5|AC008220 Drosophila melanogaster, chromosome ... 79 9e-13
gb|AE003776.1|AE003776 Drosophila melanogaster genomic scaf... 79 9e-13
gb|AC007975.7|AC007975 Drosophila melanogaster, chromosome ... 79 9e-13
gb|AF355474.1|AF355474 Oryzias latipes sox9 protein (sox9) ... 79 1e-12
>gb|AF152356.2|AF152356 Gallus gallus Sox10 protein (Sox10) mRNA, complete cds
Length = 2184
Score = 825 bits (2130), Expect = 0.0
Identities = 403/461 (87%), Positives = 403/461 (87%)
Frame = +3
Query: 1 MADDQDLSEVEMSPVGSEDHHCLSPGPSMASDNSSHLASSGNGEMGKVKKEQQDSEADDD 60
MADDQDLSEVEMSPVGSEDHHCLSPGPSMASDNSSHLASSGNGEMGKVKKEQQDSEADDD
Sbjct: 189 MADDQDLSEVEMSPVGSEDHHCLSPGPSMASDNSSHLASSGNGEMGKVKKEQQDSEADDD 368
Query: 61 KFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQY 120
KFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQY
Sbjct: 369 KFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQY 548
Query: 121 PHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXX 180
PHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK
Sbjct: 549 PHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKATQG 728
Query: 181 XXXXXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGXXXXXXXXKT 240
SIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHG KT
Sbjct: 729 EGEGQVEGEAGGAASIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGPPTPPTTPKT 908
Query: 241 ELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXXX 300
ELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPN
Sbjct: 909 ELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNGHA 1088
Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDSKAQVKTEGSAP 360
WISKQHGVSLSATTSPVVDSKAQVKTEGSAP
Sbjct: 1089GHPGHVGGYAAAAGYGLGSALAAASGHSAWISKQHGVSLSATTSPVVDSKAQVKTEGSAP 1268
Query: 361 GGHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSSQASGLYSAF 420
GGHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSSQASGLYSAF
Sbjct: 1269GGHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSSQASGLYSAF 1448
Query: 421 SYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 461
SYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP
Sbjct: 1449SYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 1571
>emb|AJ245601.1|GGA245601 Gallus gallus mRNA for Sry-box transcription factor (sox-10 gene)
Length = 3346
Score = 825 bits (2130), Expect = 0.0
Identities = 403/461 (87%), Positives = 403/461 (87%)
Frame = +2
Query: 1 MADDQDLSEVEMSPVGSEDHHCLSPGPSMASDNSSHLASSGNGEMGKVKKEQQDSEADDD 60
MADDQDLSEVEMSPVGSEDHHCLSPGPSMASDNSSHLASSGNGEMGKVKKEQQDSEADDD
Sbjct: 167 MADDQDLSEVEMSPVGSEDHHCLSPGPSMASDNSSHLASSGNGEMGKVKKEQQDSEADDD 346
Query: 61 KFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQY 120
KFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQY
Sbjct: 347 KFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQY 526
Query: 121 PHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXX 180
PHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK
Sbjct: 527 PHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKATQG 706
Query: 181 XXXXXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGXXXXXXXXKT 240
SIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHG KT
Sbjct: 707 EGEGQVEGEAGGAASIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGPPTPPTTPKT 886
Query: 241 ELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXXX 300
ELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPN
Sbjct: 887 ELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNGHA 1066
Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDSKAQVKTEGSAP 360
WISKQHGVSLSATTSPVVDSKAQVKTEGSAP
Sbjct: 1067GHPGHVGGYAAAAGYGLGSALAAASGHSAWISKQHGVSLSATTSPVVDSKAQVKTEGSAP 1246
Query: 361 GGHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSSQASGLYSAF 420
GGHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSSQASGLYSAF
Sbjct: 1247GGHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSSQASGLYSAF 1426
Query: 421 SYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 461
SYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP
Sbjct: 1427SYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 1549
>gb|BC018808.1|BC018808 Homo sapiens, clone IMAGE:4861099, mRNA
Length = 2906
Score = 704 bits (1817), Expect = 0.0
Identities = 355/470 (75%), Positives = 374/470 (79%), Gaps = 9/470 (1%)
Frame = +2
Query: 1 MADDQDLSEVEMSPVGSEDHHCLSPG--PSMASDN----SSHLASSGNGEMGKVKKEQQD 54
MA++QDLSEVE+SPVGSE+ CLSPG PS+ D S AS G GE+GKVKKEQQD
Sbjct: 275 MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQD 454
Query: 55 SEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARR 114
EADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNG++KSKPHVKRPMNAFMVWAQAARR
Sbjct: 455 GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR 634
Query: 115 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 174
KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN
Sbjct: 635 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 814
Query: 175 GKXXXXXXX-XXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGXXX 233
GK +IQAHYK+AHLDHRHPGEGSPMSDG+PEH SGQSHG
Sbjct: 815 GKAAQGEAECPGGEAEQGGTAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQSHGPPT 994
Query: 234 XXXXXKTELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQY 293
KTELQ+GKAD KR+GRS+GEGGKPHIDFGNVDIGEISHEVMSNMETFDV E DQY
Sbjct: 995 PPTTPKTELQSGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETFDVAELDQY 1174
Query: 294 LPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDSKAQV 353
LPPN WISK GV+L + P VD+KAQV
Sbjct: 1175LPPN----GHPGHVSSYSAAGYGLGSALAVASGHSAWISKPPGVALPTVSPPGVDAKAQV 1342
Query: 354 KTEGSAPGG--HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSS 411
KTE + P G HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDY DHQPSGPYY HS
Sbjct: 1343KTETAGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHSG 1522
Query: 412 QASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 461
QASGLYSAFSYMGPSQRPLYTAISDP+PS PQSHSPTHWEQPVYTTLSRP
Sbjct: 1523QASGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP 1672
>gb|BC002824.1|BC002824 Homo sapiens, SRY (sex determining region Y)-box 10, clone MGC:3510
IMAGE:3635492, mRNA, complete cds
Length = 2146
Score = 704 bits (1817), Expect = 0.0
Identities = 355/470 (75%), Positives = 374/470 (79%), Gaps = 9/470 (1%)
Frame = +3
Query: 1 MADDQDLSEVEMSPVGSEDHHCLSPG--PSMASDN----SSHLASSGNGEMGKVKKEQQD 54
MA++QDLSEVE+SPVGSE+ CLSPG PS+ D S AS G GE+GKVKKEQQD
Sbjct: 102 MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQD 281
Query: 55 SEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARR 114
EADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNG++KSKPHVKRPMNAFMVWAQAARR
Sbjct: 282 GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR 461
Query: 115 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 174
KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN
Sbjct: 462 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 641
Query: 175 GKXXXXXXX-XXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGXXX 233
GK +IQAHYK+AHLDHRHPGEGSPMSDG+PEH SGQSHG
Sbjct: 642 GKAAQGEAECPGGEAEQGGTAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQSHGPPT 821
Query: 234 XXXXXKTELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQY 293
KTELQ+GKAD KR+GRS+GEGGKPHIDFGNVDIGEISHEVMSNMETFDV E DQY
Sbjct: 822 PPTTPKTELQSGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETFDVAELDQY 1001
Query: 294 LPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDSKAQV 353
LPPN WISK GV+L + P VD+KAQV
Sbjct: 1002LPPN----GHPGHVSSYSAAGYGLGSALAVASGHSAWISKPPGVALPTVSPPGVDAKAQV 1169
Query: 354 KTEGSAPGG--HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSS 411
KTE + P G HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDY DHQPSGPYY HS
Sbjct: 1170KTETAGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHSG 1349
Query: 412 QASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 461
QASGLYSAFSYMGPSQRPLYTAISDP+PS PQSHSPTHWEQPVYTTLSRP
Sbjct: 1350QASGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP 1499
>ref|NM_006941.1| Homo sapiens SRY (sex determining region Y)-box 10 (SOX10), mRNA
Length = 2565
Score = 704 bits (1817), Expect = 0.0
Identities = 355/470 (75%), Positives = 374/470 (79%), Gaps = 9/470 (1%)
Frame = +1
Query: 1 MADDQDLSEVEMSPVGSEDHHCLSPG--PSMASDN----SSHLASSGNGEMGKVKKEQQD 54
MA++QDLSEVE+SPVGSE+ CLSPG PS+ D S AS G GE+GKVKKEQQD
Sbjct: 121 MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQD 300
Query: 55 SEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARR 114
EADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNG++KSKPHVKRPMNAFMVWAQAARR
Sbjct: 301 GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR 480
Query: 115 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 174
KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN
Sbjct: 481 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 660
Query: 175 GKXXXXXXX-XXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGXXX 233
GK +IQAHYK+AHLDHRHPGEGSPMSDG+PEH SGQSHG
Sbjct: 661 GKAAQGEAECPGGEAEQGGTAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQSHGPPT 840
Query: 234 XXXXXKTELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQY 293
KTELQ+GKAD KR+GRS+GEGGKPHIDFGNVDIGEISHEVMSNMETFDV E DQY
Sbjct: 841 PPTTPKTELQSGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETFDVAELDQY 1020
Query: 294 LPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDSKAQV 353
LPPN WISK GV+L + P VD+KAQV
Sbjct: 1021LPPN----GHPGHVSSYSAAGYGLGSALAVASGHSAWISKPPGVALPTVSPPGVDAKAQV 1188
Query: 354 KTEGSAPGG--HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSS 411
KTE + P G HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDY DHQPSGPYY HS
Sbjct: 1189KTETAGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHSG 1368
Query: 412 QASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 461
QASGLYSAFSYMGPSQRPLYTAISDP+PS PQSHSPTHWEQPVYTTLSRP
Sbjct: 1369QASGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP 1518
>emb|AJ001183.1|HSJ001183 Homo sapiens mRNA for Sox10 protein
Length = 2565
Score = 704 bits (1817), Expect = 0.0
Identities = 355/470 (75%), Positives = 374/470 (79%), Gaps = 9/470 (1%)
Frame = +1
Query: 1 MADDQDLSEVEMSPVGSEDHHCLSPG--PSMASDN----SSHLASSGNGEMGKVKKEQQD 54
MA++QDLSEVE+SPVGSE+ CLSPG PS+ D S AS G GE+GKVKKEQQD
Sbjct: 121 MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQD 300
Query: 55 SEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARR 114
EADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNG++KSKPHVKRPMNAFMVWAQAARR
Sbjct: 301 GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR 480
Query: 115 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 174
KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN
Sbjct: 481 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 660
Query: 175 GKXXXXXXX-XXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGXXX 233
GK +IQAHYK+AHLDHRHPGEGSPMSDG+PEH SGQSHG
Sbjct: 661 GKAAQGEAECPGGEAEQGGTAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQSHGPPT 840
Query: 234 XXXXXKTELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQY 293
KTELQ+GKAD KR+GRS+GEGGKPHIDFGNVDIGEISHEVMSNMETFDV E DQY
Sbjct: 841 PPTTPKTELQSGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETFDVAELDQY 1020
Query: 294 LPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDSKAQV 353
LPPN WISK GV+L + P VD+KAQV
Sbjct: 1021LPPN----GHPGHVSSYSAAGYGLGSALAVASGHSAWISKPPGVALPTVSPPGVDAKAQV 1188
Query: 354 KTEGSAPGG--HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSS 411
KTE + P G HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDY DHQPSGPYY HS
Sbjct: 1189KTETAGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHSG 1368
Query: 412 QASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 461
QASGLYSAFSYMGPSQRPLYTAISDP+PS PQSHSPTHWEQPVYTTLSRP
Sbjct: 1369QASGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP 1518
>ref|XM_009977.4| Homo sapiens SRY (sex determining region Y)-box 10 (SOX10), mRNA
Length = 2861
Score = 704 bits (1817), Expect = 0.0
Identities = 355/470 (75%), Positives = 374/470 (79%), Gaps = 9/470 (1%)
Frame = +3
Query: 1 MADDQDLSEVEMSPVGSEDHHCLSPG--PSMASDN----SSHLASSGNGEMGKVKKEQQD 54
MA++QDLSEVE+SPVGSE+ CLSPG PS+ D S AS G GE+GKVKKEQQD
Sbjct: 279 MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQD 458
Query: 55 SEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARR 114
EADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNG++KSKPHVKRPMNAFMVWAQAARR
Sbjct: 459 GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR 638
Query: 115 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 174
KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN
Sbjct: 639 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 818
Query: 175 GKXXXXXXX-XXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGXXX 233
GK +IQAHYK+AHLDHRHPGEGSPMSDG+PEH SGQSHG
Sbjct: 819 GKAAQGEAECPGGEAEQGGTAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQSHGPPT 998
Query: 234 XXXXXKTELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQY 293
KTELQ+GKAD KR+GRS+GEGGKPHIDFGNVDIGEISHEVMSNMETFDV E DQY
Sbjct: 999 PPTTPKTELQSGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETFDVAELDQY 1178
Query: 294 LPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDSKAQV 353
LPPN WISK GV+L + P VD+KAQV
Sbjct: 1179LPPN----GHPGHVSSYSAAGYGLGSALAVASGHSAWISKPPGVALPTVSPPGVDAKAQV 1346
Query: 354 KTEGSAPGG--HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSS 411
KTE + P G HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDY DHQPSGPYY HS
Sbjct: 1347KTETAGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHSG 1526
Query: 412 QASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 461
QASGLYSAFSYMGPSQRPLYTAISDP+PS PQSHSPTHWEQPVYTTLSRP
Sbjct: 1527QASGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP 1676
>gb|BC007595.1|BC007595 Homo sapiens, SRY (sex determining region Y)-box 10, clone
MGC:15649 IMAGE:3346551, mRNA, complete cds
Length = 2882
Score = 704 bits (1817), Expect = 0.0
Identities = 355/470 (75%), Positives = 374/470 (79%), Gaps = 9/470 (1%)
Frame = +3
Query: 1 MADDQDLSEVEMSPVGSEDHHCLSPG--PSMASDN----SSHLASSGNGEMGKVKKEQQD 54
MA++QDLSEVE+SPVGSE+ CLSPG PS+ D S AS G GE+GKVKKEQQD
Sbjct: 279 MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQD 458
Query: 55 SEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARR 114
EADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNG++KSKPHVKRPMNAFMVWAQAARR
Sbjct: 459 GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR 638
Query: 115 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 174
KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN
Sbjct: 639 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 818
Query: 175 GKXXXXXXX-XXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGXXX 233
GK +IQAHYK+AHLDHRHPGEGSPMSDG+PEH SGQSHG
Sbjct: 819 GKAAQGEAECPGGEAEQGGTAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQSHGPPT 998
Query: 234 XXXXXKTELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQY 293
KTELQ+GKAD KR+GRS+GEGGKPHIDFGNVDIGEISHEVMSNMETFDV E DQY
Sbjct: 999 PPTTPKTELQSGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETFDVAELDQY 1178
Query: 294 LPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDSKAQV 353
LPPN WISK GV+L + P VD+KAQV
Sbjct: 1179LPPN----GHPGHVSSYSAAGYGLGSALAVASGHSAWISKPPGVALPTVSPPGVDAKAQV 1346
Query: 354 KTEGSAPGG--HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSS 411
KTE + P G HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDY DHQPSGPYY HS
Sbjct: 1347KTETAGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHSG 1526
Query: 412 QASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 461
QASGLYSAFSYMGPSQRPLYTAISDP+PS PQSHSPTHWEQPVYTTLSRP
Sbjct: 1527QASGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP 1676
>gb|AF017182.1|AF017182 Mus musculus putative transcription factor (Sox10) mRNA, partial
cds
Length = 2761
Score = 701 bits (1809), Expect = 0.0
Identities = 354/470 (75%), Positives = 373/470 (79%), Gaps = 9/470 (1%)
Frame = +2
Query: 1 MADDQDLSEVEMSPVGSEDHHCLSPG--PSMASDN----SSHLASSGNGEMGKVKKEQQD 54
MA++QDLSEVE+SPVGSE+ CLSPG PS+ D S AS G GE+GKVKKEQQD
Sbjct: 350 MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQD 529
Query: 55 SEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARR 114
EADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNG++KSKPHVKRPMNAFMVWAQAARR
Sbjct: 530 GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR 709
Query: 115 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 174
KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN
Sbjct: 710 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 889
Query: 175 GKXXXXXXX-XXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGXXX 233
GK +IQAHYK+AHLDHRHP EGSPMSDG+PEH SGQSHG
Sbjct: 890 GKAAQGEAECPGGEAEQGGAAAIQAHYKSAHLDHRHPEEGSPMSDGNPEHPSGQSHGPPT 1069
Query: 234 XXXXXKTELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQY 293
KTELQ+GKAD KR+GRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDV E DQY
Sbjct: 1070PPTTPKTELQSGKADPKRDGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVTELDQY 1249
Query: 294 LPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDSKAQV 353
LPPN WISK GV+L + P VD+KAQV
Sbjct: 1250LPPN----GHPGHVGSYSAAGYGLGSALAVASGHSAWISKPPGVALPTVSPPGVDAKAQV 1417
Query: 354 KTEGSAPGG--HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSS 411
KTE + P G HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDY DHQPSGPYY H+
Sbjct: 1418KTETTGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHAG 1597
Query: 412 QASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 461
QASGLYSAFSYMGPSQRPLYTAISDP+PS PQSHSPTHWEQPVYTTLSRP
Sbjct: 1598QASGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP 1747
>gb|AF047043.1|AF047043 Mus musculus Sox-10 protein (Sox10) mRNA, complete cds
Length = 1462
Score = 701 bits (1809), Expect = 0.0
Identities = 354/470 (75%), Positives = 373/470 (79%), Gaps = 9/470 (1%)
Frame = +3
Query: 1 MADDQDLSEVEMSPVGSEDHHCLSPG--PSMASDN----SSHLASSGNGEMGKVKKEQQD 54
MA++QDLSEVE+SPVGSE+ CLSPG PS+ D S AS G GE+GKVKKEQQD
Sbjct: 54 MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQD 233
Query: 55 SEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARR 114
EADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNG++KSKPHVKRPMNAFMVWAQAARR
Sbjct: 234 GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR 413
Query: 115 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 174
KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN
Sbjct: 414 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 593
Query: 175 GKXXXXXXX-XXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGXXX 233
GK +IQAHYK+AHLDHRHP EGSPMSDG+PEH SGQSHG
Sbjct: 594 GKAAQGEAECPGGEAEQGGAAAIQAHYKSAHLDHRHPEEGSPMSDGNPEHPSGQSHGPPT 773
Query: 234 XXXXXKTELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQY 293
KTELQ+GKAD KR+GRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDV E DQY
Sbjct: 774 PPTTPKTELQSGKADPKRDGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVTELDQY 953
Query: 294 LPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDSKAQV 353
LPPN WISK GV+L + P VD+KAQV
Sbjct: 954 LPPN----GHPGHVGSYSAAGYGLGSALAVASGHSAWISKPPGVALPTVSPPGVDAKAQV 1121
Query: 354 KTEGSAPGG--HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSS 411
KTE + P G HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDY DHQPSGPYY H+
Sbjct: 1122KTETTGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHAG 1301
Query: 412 QASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 461
QASGLYSAFSYMGPSQRPLYTAISDP+PS PQSHSPTHWEQPVYTTLSRP
Sbjct: 1302QASGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP 1451
>ref|NM_019193.1| Rattus norvegicus SRY-box containing gene 10 (Sox10), mRNA
Length = 3030
Score = 701 bits (1809), Expect = 0.0
Identities = 352/470 (74%), Positives = 370/470 (77%), Gaps = 9/470 (1%)
Frame = +1
Query: 1 MADDQDLSEVEMSPVGSEDHHCLSP------GPSMASDNSSHLASSGNGEMGKVKKEQQD 54
MA++QDLSEVE+SPVGSE+ CLSP GP S AS G GE+GKVKKEQQD
Sbjct: 583 MAEEQDLSEVELSPVGSEEPRCLSPSSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQD 762
Query: 55 SEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARR 114
EADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNG++KSKPHVKRPMNAFMVWAQAARR
Sbjct: 763 GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR 942
Query: 115 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 174
KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN
Sbjct: 943 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 1122
Query: 175 GKXXXXXXX-XXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGXXX 233
GK +IQAHYK+AHLDHRHP EGSPMSDG+PEH SGQSHG
Sbjct: 1123 GKAAQGEAECPGGETDQGGAAAIQAHYKSAHLDHRHPEEGSPMSDGNPEHPSGQSHGPPT 1302
Query: 234 XXXXXKTELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQY 293
KTELQ+GKAD KR+GRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDV E DQY
Sbjct: 1303 PPTTPKTELQSGKADPKRDGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVTELDQY 1482
Query: 294 LPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDSKAQV 353
LPPN WISK GV+L + P VD+KAQV
Sbjct: 1483 LPPN----GHPGHVGSYSAAGYGLSSALAVASGHSAWISKPPGVALPTVSPPAVDAKAQV 1650
Query: 354 KTEGSAPGG--HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSS 411
KTE + P G HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDY DHQPSGPYY H+
Sbjct: 1651 KTETTGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHAG 1830
Query: 412 QASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 461
QASGLYSAFSYMGPSQRPLYTAISDP+PS PQSHSPTHWEQPVYTTLSRP
Sbjct: 1831 QASGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP 1980
>emb|AJ001029.1|RNSOX10 Rattus norvegicus mRNA for Sox10 protein
Length = 3030
Score = 701 bits (1809), Expect = 0.0
Identities = 352/470 (74%), Positives = 370/470 (77%), Gaps = 9/470 (1%)
Frame = +1
Query: 1 MADDQDLSEVEMSPVGSEDHHCLSP------GPSMASDNSSHLASSGNGEMGKVKKEQQD 54
MA++QDLSEVE+SPVGSE+ CLSP GP S AS G GE+GKVKKEQQD
Sbjct: 583 MAEEQDLSEVELSPVGSEEPRCLSPSSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQD 762
Query: 55 SEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARR 114
EADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNG++KSKPHVKRPMNAFMVWAQAARR
Sbjct: 763 GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR 942
Query: 115 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 174
KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN
Sbjct: 943 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 1122
Query: 175 GKXXXXXXX-XXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGXXX 233
GK +IQAHYK+AHLDHRHP EGSPMSDG+PEH SGQSHG
Sbjct: 1123 GKAAQGEAECPGGETDQGGAAAIQAHYKSAHLDHRHPEEGSPMSDGNPEHPSGQSHGPPT 1302
Query: 234 XXXXXKTELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQY 293
KTELQ+GKAD KR+GRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDV E DQY
Sbjct: 1303 PPTTPKTELQSGKADPKRDGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVTELDQY 1482
Query: 294 LPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDSKAQV 353
LPPN WISK GV+L + P VD+KAQV
Sbjct: 1483 LPPN----GHPGHVGSYSAAGYGLSSALAVASGHSAWISKPPGVALPTVSPPAVDAKAQV 1650
Query: 354 KTEGSAPGG--HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSS 411
KTE + P G HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDY DHQPSGPYY H+
Sbjct: 1651 KTETTGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHAG 1830
Query: 412 QASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 461
QASGLYSAFSYMGPSQRPLYTAISDP+PS PQSHSPTHWEQPVYTTLSRP
Sbjct: 1831 QASGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP 1980
>gb|BC018551.1|BC018551 Mus musculus, Similar to SRY-box containing gene 10, clone
MGC:18351 IMAGE:3675437, mRNA, complete cds
Length = 2554
Score = 701 bits (1809), Expect = 0.0
Identities = 354/470 (75%), Positives = 373/470 (79%), Gaps = 9/470 (1%)
Frame = +2
Query: 1 MADDQDLSEVEMSPVGSEDHHCLSPG--PSMASDN----SSHLASSGNGEMGKVKKEQQD 54
MA++QDLSEVE+SPVGSE+ CLSPG PS+ D S AS G GE+GKVKKEQQD
Sbjct: 86 MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQD 265
Query: 55 SEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARR 114
EADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNG++KSKPHVKRPMNAFMVWAQAARR
Sbjct: 266 GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR 445
Query: 115 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 174
KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN
Sbjct: 446 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 625
Query: 175 GKXXXXXXX-XXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGXXX 233
GK +IQAHYK+AHLDHRHP EGSPMSDG+PEH SGQSHG
Sbjct: 626 GKAAQGEAECPGGEAEQGGAAAIQAHYKSAHLDHRHPEEGSPMSDGNPEHPSGQSHGPPT 805
Query: 234 XXXXXKTELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQY 293
KTELQ+GKAD KR+GRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDV E DQY
Sbjct: 806 PPTTPKTELQSGKADPKRDGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVTELDQY 985
Query: 294 LPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDSKAQV 353
LPPN WISK GV+L + P VD+KAQV
Sbjct: 986 LPPN----GHPGHVGSYSAAGYGLGSALAVASGHSAWISKPPGVALPTVSPPGVDAKAQV 1153
Query: 354 KTEGSAPGG--HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSS 411
KTE + P G HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDY DHQPSGPYY H+
Sbjct: 1154KTETTGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHAG 1333
Query: 412 QASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 461
QASGLYSAFSYMGPSQRPLYTAISDP+PS PQSHSPTHWEQPVYTTLSRP
Sbjct: 1334QASGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP 1483
>gb|AF047389.1|AF047389 Mus musculus Dominant megacolon mutant Sox-10 protein (Sox10) mRNA,
complete cds
Length = 1463
Score = 399 bits (1024), Expect(2) = 0.0
Identities = 202/296 (68%), Positives = 215/296 (72%), Gaps = 2/296 (0%)
Frame = +1
Query: 168 QPRRRKNGKXXXXXXXXXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQ 227
QPR R+N + +IQAHYK+AHLDHRHP EGSPMSDG+PEH SGQ
Sbjct: 601 QPRGRQNAQAGEAEQGGAA--------AIQAHYKSAHLDHRHPEEGSPMSDGNPEHPSGQ 756
Query: 228 SHGXXXXXXXXKTELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDV 287
SHG KTELQ+GKAD KR+GRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDV
Sbjct: 757 SHGPPTPPTTPKTELQSGKADPKRDGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDV 936
Query: 288 NEFDQYLPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVV 347
E DQYLPPN WISK GV+L + P V
Sbjct: 937 TELDQYLPPNGHPGHVGSYSAAGYGLGSALAVASGHSA----WISKPPGVALPTVSPPGV 1104
Query: 348 DSKAQVKTEGSAPGG--HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGP 405
D+KAQVKTE + P G HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDY DHQPSGP
Sbjct: 1105DAKAQVKTETTGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGP 1284
Query: 406 YYSHSSQASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 461
YY H+ QASGLYSAFSYMGPSQRPLYTAISDP+PS PQSHSPTHWEQPVYTTLSRP
Sbjct: 1285YYGHAGQASGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP 1452
Score = 315 bits (806), Expect(2) = 0.0
Identities = 156/182 (85%), Positives = 164/182 (89%), Gaps = 6/182 (3%)
Frame = +3
Query: 1 MADDQDLSEVEMSPVGSEDHHCLSPG--PSMASDN----SSHLASSGNGEMGKVKKEQQD 54
MA++QDLSEV +SPVGSE+ CLSPG PS+ D S AS G GE+GKVKKEQQD
Sbjct: 54 MAEEQDLSEVVLSPVGSEEPRCLSPGSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQD 233
Query: 55 SEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARR 114
EADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNG++KSKPHVKRPMNAFMVWAQAARR
Sbjct: 234 GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR 413
Query: 115 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 174
KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN
Sbjct: 414 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 593
Query: 175 GK 176
GK
Sbjct: 594 GK 599
>gb|U66141.1|MMU66141 Mus musculus transcription factor Sox-M (sox-M) mRNA, partial cds
Length = 2761
Score = 536 bits (1382), Expect(2) = e-152
Identities = 287/445 (64%), Positives = 309/445 (68%), Gaps = 12/445 (2%)
Frame = +3
Query: 14 PVGSEDHHCLSPG--PSMASDN----SSHLASSGNGEMGKVKKEQQDSEADDDKFPVCIR 67
P GSE+ CLSPG PS+ D S AS G GE+GKVKKEQQD EADDDKFPVCIR
Sbjct: 324 PCGSEEPRCLSPGSAPSLGPDGGGGGSVLRASPGPGELGKVKKEQQDGEADDDKFPVCIR 503
Query: 68 EAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAE 127
EAVSQVLSGYDWTLVPMPVRVNG++KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAE
Sbjct: 504 EAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAE 683
Query: 128 LSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXX-XX 186
LSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK
Sbjct: 684 LSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGEAECPGG 863
Query: 187 XXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGXXXXXXXXKTELQAGK 246
+IQAHYK+AHLDHRHP EGSPMSDG+PEH SGQSHG KTELQ+GK
Sbjct: 864 EAEQGGAAAIQAHYKSAHLDHRHPEEGSPMSDGNPEHPSGQSHGPPTPPTTPKTELQSGK 1043
Query: 247 ADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXXXXXXXXX 306
AD KR+GRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDV E DQYLPPN
Sbjct: 1044ADPKRDGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVTELDQYLPPNGHPGHVGSY 1223
Query: 307 XXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDSKAQVKTEGSAPGG--HY 364
WISK GV+L + P VD+KAQV+TE + P G HY
Sbjct: 1224SAAGYGLGSALAVASGHSA----WISKPPGVALPTVSPPGVDAKAQVETETTGPQGPPHY 1391
Query: 365 TDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSSQASGLYSAFSYMG 424
TDQPSTSQIAYTSLSLPHYGSA P P P P + ++ F G
Sbjct: 1392TDQPSTSQIAYTSLSLPHYGSASPPSHDPSLTILTISPQDPIMAIQARPLASTQPFLTWG 1571
Query: 425 PSQRPLYTAISDPAP---SVPQSHS 446
PL+ + P P +PQSH+
Sbjct: 1572LPAAPLHCHL-*PQPLGAPIPQSHT 1643
Score = 88.2 bits (217), Expect = 1e-15
Identities = 47/88 (53%), Positives = 50/88 (56%)
Frame = +2
Query: 360 PGGHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSSQASGLYSA 419
P H+ D+ Q A L FPSISRPQFDY DHQPSGPYY H+ QASGLYSA
Sbjct: 1397 PAVHFPDRLHLPQSAPLRLR-------FPSISRPQFDYSDHQPSGPYYGHTGQASGLYSA 1555
Query: 420 FSYMGPSQRPLYTAISDPAPSVPQSHSP 447
FSYMGP P PAP P P
Sbjct: 1556 FSYMGPPSGPSTLPSLTPAPRGPNPTVP 1639
Score = 79.0 bits (193), Expect = 9e-13
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +1
Query: 424 GPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 461
G SQRPLYTAISDP+PS PQSHSPTHWEQPVYTTLSRP
Sbjct: 1567 GASQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP 1680
Score = 28.9 bits (63), Expect(2) = e-152
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +1
Query: 1 MADDQDLSEVEMSPV 15
MA++QDLSEVE+SPV
Sbjct: 286 MAEEQDLSEVELSPV 330
>gb|AF402677.1|AF402677 Danio rerio HMG-box transcription factor Sox10 (sox10) mRNA,
complete cds
Length = 3231
Score = 507 bits (1306), Expect = e-142
Identities = 281/494 (56%), Positives = 318/494 (63%), Gaps = 34/494 (6%)
Frame = +1
Query: 2 ADDQDLSEVEMSPVGSEDHHCLSPGPSMASDNS------------SHLASSGNGEMGKVK 49
A++ +SEVEMSP S+D H +SPG S + S + G G G V
Sbjct: 382 AEEHSMSEVEMSPGVSDDGHSMSPGHSSGAPGGADSPLPGQQSQMSGIGDDGAGVSGGVS 561
Query: 50 KEQQDSEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWA 109
+ S+ +DD+FP+ IREAVSQVL+GYDWTLVPMPVRVN +KSKPHVKRPMNAFMVWA
Sbjct: 562 VK---SDEEDDRFPIGIREAVSQVLNGYDWTLVPMPVRVNSGSKSKPHVKRPMNAFMVWA 732
Query: 110 QAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQP 169
QAARRKLADQYPHLHNAELSKTLGKLWRLLNE+DKRPFIEEAERLR QHKKD+P+YKYQP
Sbjct: 733 QAARRKLADQYPHLHNAELSKTLGKLWRLLNETDKRPFIEEAERLRKQHKKDYPEYKYQP 912
Query: 170 RRRKNGKXXXXXXXXXXXXXXXXXXSIQAHYKNAHLDHRHPG-EGSPMSDGHPEHSSGQS 228
RRRKNGK Q+HYK+ HL+ H G GSP+ DGH H++GQS
Sbjct: 913 RRRKNGKPGSSSEADAHSEGEVSHS--QSHYKSLHLEVAHGGAAGSPLGDGHHPHATGQS 1086
Query: 229 HGXXXXXXXXKTELQAGKA-DSKREG----RSLGEG-----------GKPHIDFGNVDIG 272
H KTELQ GK+ + KREG LG G GKPHIDFGNVDIG
Sbjct: 1087HSPPTPPTTPKTELQGGKSGEGKREGGASRSGLGVGADGSSASSSASGKPHIDFGNVDIG 1266
Query: 273 EISHEVMSNMETFDVNEFDQYLPPN---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 329
EISH+VM+NME FDVNEFDQYLPPN
Sbjct: 1267EISHDVMANMEPFDVNEFDQYLPPNGHPQASATASAGSAAPSYTYGISSALAAASGHSTA 1446
Query: 330 WISKQHGVSLSATTSPVVDSKAQVKTEGSAPGGHYTDQPSTSQIAYTSLSLPHYGSAFPS 389
W+SKQ S + K Q+K+E PG S S + YT L+LPHY SAFPS
Sbjct: 1447WLSKQQLPSQQHLGAD--GGKTQIKSETHFPG---DTAASGSHVTYTPLTLPHYSSAFPS 1611
Query: 390 I-SRPQF-DYPDHQPSGPYYSHSSQASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSP 447
+ SR QF +Y +HQ SG YY+HSSQ SGLYSAFSYMGPSQRPLYTAI DP SVPQSHSP
Sbjct: 1612LASRAQFAEYAEHQASGSYYAHSSQTSGLYSAFSYMGPSQRPLYTAIPDPG-SVPQSHSP 1788
Query: 448 THWEQPVYTTLSRP 461
THWEQPVYTTLSRP
Sbjct: 1789THWEQPVYTTLSRP 1830
>dbj|AB035887.1|AB035887 Rana rugosa mRNA for sox9 alpha, complete cds
Length = 1824
Score = 461 bits (1186), Expect = e-128
Identities = 253/477 (53%), Positives = 302/477 (63%), Gaps = 33/477 (6%)
Frame = +1
Query: 18 EDHHCLS--PGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVC 65
E CLS P PSM+ D++ SG+G + + Q+++ E +D+KFPVC
Sbjct: 235 EQEKCLSGAPSPSMSEDSAGSPCPSGSGSDTENTRPQENTFTKGDQDLKKETEDEKFPVC 414
Query: 66 IREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHN 125
IREAVSQVL GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHN
Sbjct: 415 IREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHN 594
Query: 126 AELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXX 185
AELSKTLGKLWRLLNE++KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 595 AELSKTLGKLWRLLNETEKRPFVEEAERLRIQHKKDHPDYKYQPRRRKSVK---NGQSEQ 765
Query: 186 XXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTELQA 244
S A +K D H S MS+ H P SGQS G KT++Q
Sbjct: 766 EDGSDQTHISPNAIFKALQADSPH--SASSMSEVHSPGEHSGQSQGPPTPPTTPKTDVQP 939
Query: 245 GKADSKREGRSLGEGGK--PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXXXXX 302
GK D KREGR L E G+ PHIDF +VDIGE+S EV+SN+ETFDVNEFDQYLPPN
Sbjct: 940 GKPDLKREGRPLQESGRQPPHIDFRDVDIGELSSEVISNIETFDVNEFDQYLPPN-GHPG 1116
Query: 303 XXXXXXXXXXXXXXXXXXXXXXXXXXXWISK------------QHGVSLSATTSPVVDSK 350
W+ K QHG+ + +
Sbjct: 1117VASTQVTYTGSYGISSAAGGPAGAGHAWMPKQPQQQPQQPQQQQHGLPTLSNEQSQAQQR 1296
Query: 351 AQVKTEGSAPGGHYTDQP---STSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYY 407
+KTE +P HY+DQ S Q+ YTS +L HYGS +P+I+R Q+DY +HQ S YY
Sbjct: 1297THIKTEQLSP-SHYSDQQQQHSPQQLNYTSFNLQHYGSTYPTITRSQYDYTEHQGSNSYY 1473
Query: 408 SHSS-QASGLYSAFSYMGPSQRPLYTAISDP--APSVPQSHSPTHWEQPVYTTLSRP 461
SH++ Q+S LYS FSYM PSQRP+YT I+D PS+PQ+HSP HWEQPVYT L+RP
Sbjct: 1474SHAAGQSSSLYSTFSYMNPSQRPMYTPIADTTGVPSIPQTHSPQHWEQPVYTQLTRP 1644
>gb|AF421878.1|AF421878 Mus musculus SRY sex determining region Y-box 9 protein (Sox9)
mRNA, complete cds
Length = 1524
Score = 449 bits (1156), Expect = e-124
Identities = 247/493 (50%), Positives = 303/493 (61%), Gaps = 55/493 (11%)
Frame = +1
Query: 24 SPGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVCIREAVSQV 73
+P P+M+ D++ SG+G + + Q+++ E+++DKFPVCIREAVSQV
Sbjct: 61 APSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQV 240
Query: 74 LSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 133
L GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG
Sbjct: 241 LKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 420
Query: 134 KLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXXXXXXXX 193
KLWRLLNES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 421 KLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK---NGQAEAEEATEQTH 591
Query: 194 XSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTELQAGKADSKRE 252
S A +K D H G MS+ H P SGQS G KT++QAGK D KRE
Sbjct: 592 ISPNAIFKALQADSPHSSSG--MSEVHSPGEHSGQSQGPPTPPTTPKTDVQAGKVDLKRE 765
Query: 253 GRSLGEGGK-PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXX-XXXXXXXXXXX 310
GR L EGG+ P IDF +VDIGE+S +V+SN+ETFDVNEFDQYLPPN
Sbjct: 766 GRPLAEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTY 945
Query: 311 XXXXXXXXXXXXXXXXXXXWISKQHG---------------------------------- 336
W+SKQ
Sbjct: 946 TGSYGISSTAPTPATAGHVWMSKQQAPPPPPQQPPQAPQAPQAPPQQQAPPQQPQAPQQQ 1125
Query: 337 ---VSLSATTSPVVDSKAQVKTEGSAPGGHYTDQP--STSQIAYTSLSLPHYGSAFPSIS 391
+ ++ P + +KTE +P HY++Q S QI+Y+ +LPHY ++P I+
Sbjct: 1126QAHTLTTLSSEPGQSQRTHIKTEQLSP-SHYSEQQQHSPQQISYSPFNLPHYSPSYPPIT 1302
Query: 392 RPQFDYPDHQPSGPYYSHSS-QASGLYSAFSYMGPSQRPLYTAISDPA--PSVPQSHSPT 448
R Q+DY DHQ SG YYSH++ Q SGLYS F+YM P+QRP+YT I+D + PS+PQ+HSP
Sbjct: 1303RSQYDYADHQNSGSYYSHAAGQGSGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQ 1482
Query: 449 HWEQPVYTTLSRP 461
HWEQPVYT L+RP
Sbjct: 1483HWEQPVYTQLTRP 1521
>gb|AF106572.1|AF106572 Alligator mississippiensis SOX9 (SOX9) mRNA, complete cds
Length = 1488
Score = 449 bits (1154), Expect = e-124
Identities = 250/489 (51%), Positives = 308/489 (62%), Gaps = 45/489 (9%)
Frame = +1
Query: 18 EDHHCLS--PGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVC 65
E C+S P P+M+ D++ SG+G + + Q+++ ++D+DKFPVC
Sbjct: 37 EQEKCISGAPSPTMSDDSAGSPCPSGSGSDTENTRPQENTFPKGDPDLKKDSDEDKFPVC 216
Query: 66 IREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHN 125
IREAVSQVL GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHN
Sbjct: 217 IREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHN 396
Query: 126 AELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXX 185
AELSKTLGKLWRLLNES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 397 AELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK---NGQSEQ 567
Query: 186 XXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTELQA 244
S A +K D P S MS+ H P SGQS G KT++Q
Sbjct: 568 EEGSEQTHISPNAIFKALQAD--SPQSSSSMSEVHSPGEHSGQSQGPPTPPTTPKTDVQP 741
Query: 245 GKADSKREGRSLGEGGK--PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXX--- 299
GK D KREGR L EGG+ PHIDF +VDIGE+S +V+SN+ETFDVNEFDQYLPPN
Sbjct: 742 GKQDLKREGRPLQEGGRQPPHIDFRDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGV 921
Query: 300 -XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISK---------------QHGVSLSATT 343
W+SK Q + T
Sbjct: 922 PATHGQPGQVTYTGSYGISSTAATPTGAGHVWMSKQPQPPQQPQPPQPPPQAQPQAAHTM 1101
Query: 344 SPVVDSKAQ------VKTEGSAPGGHYTDQP--STSQIAYTSLSLPHYGSAFPSISRPQF 395
+P+ + Q +KTE +P HY++Q S QI Y+S +L HY S++P+I+R Q+
Sbjct: 1102TPLSGEQGQSQQRPHIKTEQLSP-SHYSEQQQHSPQQINYSSFNLQHYSSSYPTITRSQY 1278
Query: 396 DYPDHQPSGPYYSHSS-QASGLYSAFSYMGPSQRPLYTAISDPA--PSVPQSHSPTHWEQ 452
DY DHQ S YYSH++ Q++ LYS F+YM P+QRP+YT I+D + PS+PQ+HSP HWEQ
Sbjct: 1279DYTDHQSSNSYYSHAAGQSTSLYSTFTYMNPTQRPMYTPIADTSGVPSIPQTHSPQHWEQ 1458
Query: 453 PVYTTLSRP 461
PVYT L+RP
Sbjct: 1459PVYTQLTRP 1485
>gb|AY035397.1| Xenopus laevis transcription factor SOX9 mRNA, complete cds
Length = 3071
Score = 448 bits (1153), Expect = e-124
Identities = 247/471 (52%), Positives = 296/471 (62%), Gaps = 27/471 (5%)
Frame = +2
Query: 18 EDHHCLS--PGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVC 65
E C+S P P+M+ D++ SG+G + + Q+++ E +D+KFPVC
Sbjct: 278 EQDKCMSGAPSPTMSDDSAGSPCPSGSGSDTENTRPQENTFPKGDQELKKETEDEKFPVC 457
Query: 66 IREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHN 125
IREAVSQVL GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHN
Sbjct: 458 IREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHN 637
Query: 126 AELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXX 185
AELSKTLGKLWRLLNE +KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 638 AELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK---NGQTEQ 808
Query: 186 XXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTELQA 244
S A +K D H S MS+ H P SGQS G KT++Q
Sbjct: 809 EDGAEQTHISPNAIFKALQADSPH--SSSSMSEVHSPGEHSGQSQGPPTPPTTPKTDIQP 982
Query: 245 GKADSKREGRSLGEGGK--PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXXXXX 302
GK D KREGR L E G+ P IDF +VDIGE+S EV+S +E FDVNEFDQYLPPN
Sbjct: 983 GKPDLKREGRPLQENGRQPPRIDFRDVDIGELSSEVISTIEIFDVNEFDQYLPPNGHPGV 1162
Query: 303 XXXXXXXXXXXXXXXXXXXXXXXXXXXWIS------KQHGVSLSATTSPVVDSKAQVKTE 356
+QH +S + + +KTE
Sbjct: 1163GSTQASYTGSYGISSTPSATTGAGPACMSKQQQQQPQQHSLSTLNSEQSQSQQRTHIKTE 1342
Query: 357 GSAPGGHYTDQP---STSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSS-Q 412
+P HY+DQ S Q+ Y+S +L HY S++P+I+R Q+DY +HQ S YYSH+S Q
Sbjct: 1343QLSP-SHYSDQQQQHSPQQLNYSSFNLQHYSSSYPTITRAQYDYTEHQGSSTYYSHASGQ 1519
Query: 413 ASGLYSAFSYMGPSQRPLYTAISDP--APSVPQSHSPTHWEQPVYTTLSRP 461
SGLYS FSYM PSQRPLYT I+D PS+PQ+HSP HWEQPVYT L+RP
Sbjct: 1520NSGLYSTFSYMNPSQRPLYTPIADTTGVPSIPQTHSPQHWEQPVYTQLTRP 1672
>dbj|AB012236.1|AB012236 Gallus gallus mRNA for SOX9, complete cds
Length = 1640
Score = 446 bits (1148), Expect = e-123
Identities = 248/488 (50%), Positives = 304/488 (61%), Gaps = 44/488 (9%)
Frame = +3
Query: 18 EDHHCLS--PGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVC 65
E C+S P P+M+ D++ SG+G + + Q+++ E+D+DKFPVC
Sbjct: 153 EQDKCISDAPSPTMSDDSAGSPCPSGSGSDTENTRPQENTFPKGDPDLKKESDEDKFPVC 332
Query: 66 IREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHN 125
IREAVSQVL GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHN
Sbjct: 333 IREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHN 512
Query: 126 AELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXX 185
AELSKTLGKLWRLLNES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 513 AELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK---NGQSEQ 683
Query: 186 XXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTEL-Q 243
S A +K D P S +S+ H P SGQS G KT+ Q
Sbjct: 684 EEGSEQTHISPNAIFKALQAD--SPQSSSSISEVHSPGEHSGQSQGPPTPPTTPKTDAQQ 857
Query: 244 AGKADSKREGRSLGEGGK--PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNX--X 299
GK D KREGR L EGG+ PHIDF +VDIGE+S +V+SN+ETFDVNEFDQYLPPN
Sbjct: 858 PGKQDLKREGRPLAEGGRQPPHIDFRDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPG 1037
Query: 300 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISK--------------QHGVSLSATTSP 345
W++K QH + +
Sbjct: 1038VPATHGQVTTYSGTYGISSSASSPAGAGHAWMAKQQPQPPQPPAQPPAQHTLPALSGEQG 1217
Query: 346 VVDSKAQVKTEGSAPGGHYTDQPSTS---------QIAYTSLSLPHYGSAFPSISRPQFD 396
+ +KTE +P HY++Q S Q+ Y S +L HYGS++P I+R Q+D
Sbjct: 1218PAQQRPHIKTEQLSP-SHYSEQQQHSPQQQQQQQQQLGYGSFNLQHYGSSYPPITRSQYD 1394
Query: 397 YPDHQPSGPYYSHSS-QASGLYSAFSYMGPSQRPLYTAISDPA--PSVPQSHSPTHWEQP 453
Y +HQ SG YYSH++ Q+ GLYS F+YM P+QRP+YT I+D + PS+PQ+HSP HWEQP
Sbjct: 1395YTEHQNSGSYYSHAAGQSGGLYSTFTYMNPTQRPMYTPIADTSGVPSIPQTHSPQHWEQP 1574
Query: 454 VYTTLSRP 461
VYT L+RP
Sbjct: 1575VYTQLTRP 1598
>gb|BC007951.1|BC007951 Homo sapiens, SRY (sex determining region Y)-box 9 (campomelic
dysplasia, autosomal sex-reversal), clone MGC:14364
IMAGE:4299305, mRNA, complete cds
Length = 2223
Score = 446 bits (1147), Expect = e-123
Identities = 246/495 (49%), Positives = 302/495 (60%), Gaps = 57/495 (11%)
Frame = +2
Query: 24 SPGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVCIREAVSQV 73
+P P+M+ D++ SG+G + + Q+++ E+++DKFPVCIREAVSQV
Sbjct: 299 APSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQV 478
Query: 74 LSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 133
L GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG
Sbjct: 479 LKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 658
Query: 134 KLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXXXXXXXX 193
KLWRLLNES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 659 KLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK---NGQAEAEEATEQTH 829
Query: 194 XSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTELQAGKADSKRE 252
S A +K D H G MS+ H P SGQS G KT++Q GKAD KRE
Sbjct: 830 ISPNAIFKALQADSPHSSSG--MSEVHSPGEHSGQSQGPPTPPTTPKTDVQPGKADLKRE 1003
Query: 253 GRSLGEGGK-PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXX-XXXXXXXXXXX 310
GR L EGG+ P IDF +VDIGE+S +V+SN+ETFDVNEFDQYLPPN
Sbjct: 1004GRPLPEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTY 1183
Query: 311 XXXXXXXXXXXXXXXXXXXWISKQHG---------------------------------- 336
W+SKQ
Sbjct: 1184TGSYGISSTAATPASAGHVWMSKQQAPPPPPQQPPQAPPAPQAPPQPQAAPPQQPAAPPQ 1363
Query: 337 -----VSLSATTSPVVDSKAQVKTEGSAPGGHYTDQP--STSQIAYTSLSLPHYGSAFPS 389
+ ++ P + +KTE +P HY++Q S QIAY+ +LPHY ++P
Sbjct: 1364QPQAHTLTTLSSEPGQSQRTHIKTEQLSP-SHYSEQQQHSPQQIAYSPFNLPHYSPSYPP 1540
Query: 390 ISRPQFDYPDHQPSGPYYSHSS-QASGLYSAFSYMGPSQRPLYTAISDPA--PSVPQSHS 446
I+R Q+DY DHQ S YYSH++ Q +GLYS F+YM P+QRP+YT I+D + PS+PQ+HS
Sbjct: 1541ITRSQYDYTDHQNSSSYYSHAAGQGTGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHS 1720
Query: 447 PTHWEQPVYTTLSRP 461
P HWEQPVYT L+RP
Sbjct: 1721PQHWEQPVYTQLTRP 1765
>ref|XM_039094.1| Homo sapiens SRY (sex determining region Y)-box 9 (campomelic
dysplasia, autosomal sex-reversal) (SOX9), mRNA
Length = 3935
Score = 446 bits (1147), Expect = e-123
Identities = 246/495 (49%), Positives = 302/495 (60%), Gaps = 57/495 (11%)
Frame = +1
Query: 24 SPGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVCIREAVSQV 73
+P P+M+ D++ SG+G + + Q+++ E+++DKFPVCIREAVSQV
Sbjct: 433 APSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQV 612
Query: 74 LSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 133
L GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG
Sbjct: 613 LKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 792
Query: 134 KLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXXXXXXXX 193
KLWRLLNES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 793 KLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK---NGQAEAEEATEQTH 963
Query: 194 XSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTELQAGKADSKRE 252
S A +K D H G MS+ H P SGQS G KT++Q GKAD KRE
Sbjct: 964 ISPNAIFKALQADSPHSSSG--MSEVHSPGEHSGQSQGPPTPPTTPKTDVQPGKADLKRE 1137
Query: 253 GRSLGEGGK-PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXX-XXXXXXXXXXX 310
GR L EGG+ P IDF +VDIGE+S +V+SN+ETFDVNEFDQYLPPN
Sbjct: 1138GRPLPEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTY 1317
Query: 311 XXXXXXXXXXXXXXXXXXXWISKQHG---------------------------------- 336
W+SKQ
Sbjct: 1318TGSYGISSTAATPASAGHVWMSKQQAPPPPPQQPPQAPPAPQAPPQPQAAPPQQPAAPPQ 1497
Query: 337 -----VSLSATTSPVVDSKAQVKTEGSAPGGHYTDQP--STSQIAYTSLSLPHYGSAFPS 389
+ ++ P + +KTE +P HY++Q S QIAY+ +LPHY ++P
Sbjct: 1498QPQAHTLTTLSSEPGQSQRTHIKTEQLSP-SHYSEQQQHSPQQIAYSPFNLPHYSPSYPP 1674
Query: 390 ISRPQFDYPDHQPSGPYYSHSS-QASGLYSAFSYMGPSQRPLYTAISDPA--PSVPQSHS 446
I+R Q+DY DHQ S YYSH++ Q +GLYS F+YM P+QRP+YT I+D + PS+PQ+HS
Sbjct: 1675ITRSQYDYTDHQNSSSYYSHAAGQGTGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHS 1854
Query: 447 PTHWEQPVYTTLSRP 461
P HWEQPVYT L+RP
Sbjct: 1855PQHWEQPVYTQLTRP 1899
>ref|NM_000346.1| Homo sapiens SRY (sex determining region Y)-box 9 (campomelic
dysplasia, autosomal sex-reversal) (SOX9), mRNA
Length = 3936
Score = 446 bits (1147), Expect = e-123
Identities = 246/495 (49%), Positives = 302/495 (60%), Gaps = 57/495 (11%)
Frame = +1
Query: 24 SPGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVCIREAVSQV 73
+P P+M+ D++ SG+G + + Q+++ E+++DKFPVCIREAVSQV
Sbjct: 433 APSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQV 612
Query: 74 LSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 133
L GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG
Sbjct: 613 LKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 792
Query: 134 KLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXXXXXXXX 193
KLWRLLNES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 793 KLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK---NGQAEAEEATEQTH 963
Query: 194 XSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTELQAGKADSKRE 252
S A +K D H G MS+ H P SGQS G KT++Q GKAD KRE
Sbjct: 964 ISPNAIFKALQADSPHSSSG--MSEVHSPGEHSGQSQGPPTPPTTPKTDVQPGKADLKRE 1137
Query: 253 GRSLGEGGK-PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXX-XXXXXXXXXXX 310
GR L EGG+ P IDF +VDIGE+S +V+SN+ETFDVNEFDQYLPPN
Sbjct: 1138GRPLPEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTY 1317
Query: 311 XXXXXXXXXXXXXXXXXXXWISKQHG---------------------------------- 336
W+SKQ
Sbjct: 1318TGSYGISSTAATPASAGHVWMSKQQAPPPPPQQPPQAPPAPQAPPQPQAAPPQQPAAPPQ 1497
Query: 337 -----VSLSATTSPVVDSKAQVKTEGSAPGGHYTDQP--STSQIAYTSLSLPHYGSAFPS 389
+ ++ P + +KTE +P HY++Q S QIAY+ +LPHY ++P
Sbjct: 1498QPQAHTLTTLSSEPGQSQRTHIKTEQLSP-SHYSEQQQHSPQQIAYSPFNLPHYSPSYPP 1674
Query: 390 ISRPQFDYPDHQPSGPYYSHSS-QASGLYSAFSYMGPSQRPLYTAISDPA--PSVPQSHS 446
I+R Q+DY DHQ S YYSH++ Q +GLYS F+YM P+QRP+YT I+D + PS+PQ+HS
Sbjct: 1675ITRSQYDYTDHQNSSSYYSHAAGQGTGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHS 1854
Query: 447 PTHWEQPVYTTLSRP 461
P HWEQPVYT L+RP
Sbjct: 1855PQHWEQPVYTQLTRP 1899
>emb|Z46629.1|HSSOX9MRN Homo sapiens SOX9 mRNA
Length = 3923
Score = 446 bits (1147), Expect = e-123
Identities = 246/495 (49%), Positives = 302/495 (60%), Gaps = 57/495 (11%)
Frame = +3
Query: 24 SPGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVCIREAVSQV 73
+P P+M+ D++ SG+G + + Q+++ E+++DKFPVCIREAVSQV
Sbjct: 420 APSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQV 599
Query: 74 LSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 133
L GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG
Sbjct: 600 LKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 779
Query: 134 KLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXXXXXXXX 193
KLWRLLNES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 780 KLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK---NGQAEAEEATEQTH 950
Query: 194 XSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTELQAGKADSKRE 252
S A +K D H G MS+ H P SGQS G KT++Q GKAD KRE
Sbjct: 951 ISPNAIFKALQADSPHSSSG--MSEVHSPGEHSGQSQGPPTPPTTPKTDVQPGKADLKRE 1124
Query: 253 GRSLGEGGK-PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXX-XXXXXXXXXXX 310
GR L EGG+ P IDF +VDIGE+S +V+SN+ETFDVNEFDQYLPPN
Sbjct: 1125GRPLPEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTY 1304
Query: 311 XXXXXXXXXXXXXXXXXXXWISKQHG---------------------------------- 336
W+SKQ
Sbjct: 1305TGSYGISSTAATPASAGHVWMSKQQAPPPPPQQPPQAPPAPQAPPQPQAAPPQQPAAPPQ 1484
Query: 337 -----VSLSATTSPVVDSKAQVKTEGSAPGGHYTDQP--STSQIAYTSLSLPHYGSAFPS 389
+ ++ P + +KTE +P HY++Q S QIAY+ +LPHY ++P
Sbjct: 1485QPQAHTLTTLSSEPGQSQRTHIKTEQLSP-SHYSEQQQHSPQQIAYSPFNLPHYSPSYPP 1661
Query: 390 ISRPQFDYPDHQPSGPYYSHSS-QASGLYSAFSYMGPSQRPLYTAISDPA--PSVPQSHS 446
I+R Q+DY DHQ S YYSH++ Q +GLYS F+YM P+QRP+YT I+D + PS+PQ+HS
Sbjct: 1662ITRSQYDYTDHQNSSSYYSHAAGQGTGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHS 1841
Query: 447 PTHWEQPVYTTLSRP 461
P HWEQPVYT L+RP
Sbjct: 1842PQHWEQPVYTQLTRP 1886
>gb|AF322900.1|AF322900 Macaca mulatta SOX9 mRNA, complete cds
Length = 1530
Score = 446 bits (1147), Expect = e-123
Identities = 246/495 (49%), Positives = 302/495 (60%), Gaps = 57/495 (11%)
Frame = +1
Query: 24 SPGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVCIREAVSQV 73
+P P+M+ D++ SG+G + + Q+++ E+++DKFPVCIREAVSQV
Sbjct: 61 APSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQV 240
Query: 74 LSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 133
L GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG
Sbjct: 241 LKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 420
Query: 134 KLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXXXXXXXX 193
KLWRLLNES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 421 KLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK---NGQAEAEEATEQTH 591
Query: 194 XSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTELQAGKADSKRE 252
S A +K D H G MS+ H P SGQS G KT++Q GKAD KRE
Sbjct: 592 ISPNAIFKALQADSPHSSSG--MSEVHSPGEHSGQSQGPPTPPTTPKTDVQPGKADLKRE 765
Query: 253 GRSLGEGGK-PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXX-XXXXXXXXXXX 310
GR L EGG+ P IDF +VDIGE+S +V+SN+ETFDVNEFDQYLPPN
Sbjct: 766 GRPLPEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTY 945
Query: 311 XXXXXXXXXXXXXXXXXXXWISKQHG---------------------------------- 336
W+SKQ
Sbjct: 946 TGSYGISSTAATPASAGHVWMSKQQAPPPPPQQPPQAPPAPQAPPQPQAAPPQQPAAPPQ 1125
Query: 337 -----VSLSATTSPVVDSKAQVKTEGSAPGGHYTDQP--STSQIAYTSLSLPHYGSAFPS 389
+ ++ P + +KTE +P HY++Q S QIAY+ +LPHY ++P
Sbjct: 1126QPQAHTLTTLSSEPGQSQRTHIKTEQLSP-SHYSEQQQHSPQQIAYSPFNLPHYSPSYPP 1302
Query: 390 ISRPQFDYPDHQPSGPYYSHSS-QASGLYSAFSYMGPSQRPLYTAISDPA--PSVPQSHS 446
I+R Q+DY DHQ S YYSH++ Q +GLYS F+YM P+QRP+YT I+D + PS+PQ+HS
Sbjct: 1303ITRSQYDYTDHQNSSSYYSHAAGQGTGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHS 1482
Query: 447 PTHWEQPVYTTLSRP 461
P HWEQPVYT L+RP
Sbjct: 1483PQHWEQPVYTQLTRP 1527
>gb|AF322898.1|AF322898 Pongo pygmaeus SOX9 mRNA, complete cds
Length = 1530
Score = 446 bits (1147), Expect = e-123
Identities = 246/495 (49%), Positives = 302/495 (60%), Gaps = 57/495 (11%)
Frame = +1
Query: 24 SPGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVCIREAVSQV 73
+P P+M+ D++ SG+G + + Q+++ E+++DKFPVCIREAVSQV
Sbjct: 61 APSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQV 240
Query: 74 LSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 133
L GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG
Sbjct: 241 LKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 420
Query: 134 KLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXXXXXXXX 193
KLWRLLNES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 421 KLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK---NGQAEAEEATEQTH 591
Query: 194 XSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTELQAGKADSKRE 252
S A +K D H G MS+ H P SGQS G KT++Q GKAD KRE
Sbjct: 592 ISPNAIFKALQADSPHSSSG--MSEVHSPGEHSGQSQGPPTPPTTPKTDVQPGKADLKRE 765
Query: 253 GRSLGEGGK-PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXX-XXXXXXXXXXX 310
GR L EGG+ P IDF +VDIGE+S +V+SN+ETFDVNEFDQYLPPN
Sbjct: 766 GRPLPEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTY 945
Query: 311 XXXXXXXXXXXXXXXXXXXWISKQHG---------------------------------- 336
W+SKQ
Sbjct: 946 TGSYGISSTAATPASAGHVWMSKQQAPPPPPQQPPQAPPAPQAPPQPQAAPPQQPAAPPQ 1125
Query: 337 -----VSLSATTSPVVDSKAQVKTEGSAPGGHYTDQP--STSQIAYTSLSLPHYGSAFPS 389
+ ++ P + +KTE +P HY++Q S QIAY+ +LPHY ++P
Sbjct: 1126QPQAHTLTTLSSEPGQSQRTHIKTEQLSP-SHYSEQQQHSPQQIAYSPFNLPHYSPSYPP 1302
Query: 390 ISRPQFDYPDHQPSGPYYSHSS-QASGLYSAFSYMGPSQRPLYTAISDPA--PSVPQSHS 446
I+R Q+DY DHQ S YYSH++ Q +GLYS F+YM P+QRP+YT I+D + PS+PQ+HS
Sbjct: 1303ITRSQYDYTDHQNSSSYYSHAAGQGTGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHS 1482
Query: 447 PTHWEQPVYTTLSRP 461
P HWEQPVYT L+RP
Sbjct: 1483PQHWEQPVYTQLTRP 1527
>gb|AF322897.1|AF322897 Hylobates sp. TIB-201 SOX9 mRNA, complete cds
Length = 1530
Score = 446 bits (1147), Expect = e-123
Identities = 246/495 (49%), Positives = 302/495 (60%), Gaps = 57/495 (11%)
Frame = +1
Query: 24 SPGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVCIREAVSQV 73
+P P+M+ D++ SG+G + + Q+++ E+++DKFPVCIREAVSQV
Sbjct: 61 APSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQV 240
Query: 74 LSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 133
L GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG
Sbjct: 241 LKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 420
Query: 134 KLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXXXXXXXX 193
KLWRLLNES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 421 KLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK---NGQAEAEEATEQTH 591
Query: 194 XSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTELQAGKADSKRE 252
S A +K D H G MS+ H P SGQS G KT++Q GKAD KRE
Sbjct: 592 ISPNAIFKALQADSPHSSSG--MSEVHSPGEHSGQSQGPPTPPTTPKTDVQPGKADLKRE 765
Query: 253 GRSLGEGGK-PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXX-XXXXXXXXXXX 310
GR L EGG+ P IDF +VDIGE+S +V+SN+ETFDVNEFDQYLPPN
Sbjct: 766 GRPLPEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTY 945
Query: 311 XXXXXXXXXXXXXXXXXXXWISKQHG---------------------------------- 336
W+SKQ
Sbjct: 946 TGSYGISSTAATPASAGHVWMSKQQAPPPPPQQPPQAPPAPQAPPQPQAAPPQQPAAPPQ 1125
Query: 337 -----VSLSATTSPVVDSKAQVKTEGSAPGGHYTDQP--STSQIAYTSLSLPHYGSAFPS 389
+ ++ P + +KTE +P HY++Q S QIAY+ +LPHY ++P
Sbjct: 1126QPQAHTLTTLSSEPGQSQRTHIKTEQLSP-SHYSEQQQHSPQQIAYSPFNLPHYSPSYPP 1302
Query: 390 ISRPQFDYPDHQPSGPYYSHSS-QASGLYSAFSYMGPSQRPLYTAISDPA--PSVPQSHS 446
I+R Q+DY DHQ S YYSH++ Q +GLYS F+YM P+QRP+YT I+D + PS+PQ+HS
Sbjct: 1303ITRSQYDYTDHQNSSSYYSHAAGQGTGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHS 1482
Query: 447 PTHWEQPVYTTLSRP 461
P HWEQPVYT L+RP
Sbjct: 1483PQHWEQPVYTQLTRP 1527
>gb|AF322899.1|AF322899 Callithrix jacchus SOX9 mRNA, complete cds
Length = 1530
Score = 446 bits (1146), Expect = e-123
Identities = 246/495 (49%), Positives = 302/495 (60%), Gaps = 57/495 (11%)
Frame = +1
Query: 24 SPGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVCIREAVSQV 73
+P P+M+ D++ SG+G + + Q+++ E+++DKFPVCIREAVSQV
Sbjct: 61 APSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQV 240
Query: 74 LSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 133
L GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG
Sbjct: 241 LKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 420
Query: 134 KLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXXXXXXXX 193
KLWRLLNES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 421 KLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK---NGQAEAEEATEQTH 591
Query: 194 XSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTELQAGKADSKRE 252
S A +K D H G MS+ H P SGQS G KT++Q GKAD KRE
Sbjct: 592 ISPNAIFKALQADSPHSSSG--MSEVHSPGEHSGQSQGPPTPPTTPKTDVQPGKADLKRE 765
Query: 253 GRSLGEGGK-PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXX-XXXXXXXXXXX 310
GR L EGG+ P IDF +VDIGE+S +V+SN+ETFDVNEFDQYLPPN
Sbjct: 766 GRPLPEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTY 945
Query: 311 XXXXXXXXXXXXXXXXXXXWISKQHG---------------------------------- 336
W+SKQ
Sbjct: 946 TGSYGISSTAATPAGAGHVWMSKQQAPPPPPQQPPQAPPAPQAPPQPQAAPPQQPAAPPQ 1125
Query: 337 -----VSLSATTSPVVDSKAQVKTEGSAPGGHYTDQP--STSQIAYTSLSLPHYGSAFPS 389
+ ++ P + +KTE +P HY++Q S QIAY+ +LPHY ++P
Sbjct: 1126QPQAHTLTTLSSEPGQSQRTHIKTEQLSP-SHYSEQQQHSPQQIAYSPFNLPHYSPSYPP 1302
Query: 390 ISRPQFDYPDHQPSGPYYSHSS-QASGLYSAFSYMGPSQRPLYTAISDPA--PSVPQSHS 446
I+R Q+DY DHQ S YYSH++ Q +GLYS F+YM P+QRP+YT I+D + PS+PQ+HS
Sbjct: 1303ITRSQYDYTDHQNSSSYYSHAAGQGTGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHS 1482
Query: 447 PTHWEQPVYTTLSRP 461
P HWEQPVYT L+RP
Sbjct: 1483PQHWEQPVYTQLTRP 1527
>gb|AF322902.1|AF322902 Pan troglodytes SOX9 mRNA, complete cds
Length = 1530
Score = 444 bits (1143), Expect = e-123
Identities = 245/495 (49%), Positives = 301/495 (60%), Gaps = 57/495 (11%)
Frame = +1
Query: 24 SPGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVCIREAVSQV 73
+P P+M+ D++ SG+G + + Q+++ E+++DKFPVCIREAVSQV
Sbjct: 61 APSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQV 240
Query: 74 LSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 133
L GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKL DQYPHLHNAELSKTLG
Sbjct: 241 LKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLGDQYPHLHNAELSKTLG 420
Query: 134 KLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXXXXXXXX 193
KLWRLLNES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 421 KLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK---NGQAEAEEATEQTH 591
Query: 194 XSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTELQAGKADSKRE 252
S A +K D H G MS+ H P SGQS G KT++Q GKAD KRE
Sbjct: 592 ISPNAIFKALQADSPHSSSG--MSEVHSPGEHSGQSQGPPTPPTTPKTDVQPGKADLKRE 765
Query: 253 GRSLGEGGK-PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXX-XXXXXXXXXXX 310
GR L EGG+ P IDF +VDIGE+S +V+SN+ETFDVNEFDQYLPPN
Sbjct: 766 GRPLPEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTY 945
Query: 311 XXXXXXXXXXXXXXXXXXXWISKQHG---------------------------------- 336
W+SKQ
Sbjct: 946 TGSYGISSTAATPASAGHVWMSKQQAPPPPPQQPPQAPPAPQAPPQPQAAPPQQPAAPPQ 1125
Query: 337 -----VSLSATTSPVVDSKAQVKTEGSAPGGHYTDQP--STSQIAYTSLSLPHYGSAFPS 389
+ ++ P + +KTE +P HY++Q S QIAY+ +LPHY ++P
Sbjct: 1126QPQAHTLTTLSSEPGQSQRTHIKTEQLSP-SHYSEQQQHSPQQIAYSPFNLPHYSPSYPP 1302
Query: 390 ISRPQFDYPDHQPSGPYYSHSS-QASGLYSAFSYMGPSQRPLYTAISDPA--PSVPQSHS 446
I+R Q+DY DHQ S YYSH++ Q +GLYS F+YM P+QRP+YT I+D + PS+PQ+HS
Sbjct: 1303ITRSQYDYTDHQNSSSYYSHAAGQGTGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHS 1482
Query: 447 PTHWEQPVYTTLSRP 461
P HWEQPVYT L+RP
Sbjct: 1483PQHWEQPVYTQLTRP 1527
>gb|AF217252.1|AF217252 Eublepharis macularius Sox9 (Sox9) mRNA, partial cds
Length = 1470
Score = 443 bits (1140), Expect = e-122
Identities = 251/486 (51%), Positives = 302/486 (61%), Gaps = 43/486 (8%)
Frame = +1
Query: 18 EDHHCLSPGPS--MASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVC 65
E CLS PS M+ D++ SG G + + Q+++ E+D+DKFPVC
Sbjct: 25 EQEKCLSGAPSRTMSDDSAGSPCPSGVGSDAENTRPQENTFPKNDPDLKKESDEDKFPVC 204
Query: 66 IREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHN 125
IREAVSQVL GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHN
Sbjct: 205 IREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHN 384
Query: 126 AELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXX 185
AELSKTLGKLWRLLNES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 385 AELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK---NGQADE 555
Query: 186 XXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTELQA 244
S A +K D P S MS+ H P SGQS G KT++Q
Sbjct: 556 EEGAEQTHISPNAIFKALQAD--SPQYSSSMSEVHSPVEHSGQSQGPPTPPTTPKTDVQP 729
Query: 245 GKADSKREGRSLGEGGK--PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXX--- 299
GK D KREGR L EGG+ PHIDF +VDIGE+S +V+SN+ETFDVNEFDQYLPPN
Sbjct: 730 GKQDLKREGRPLPEGGRQPPHIDFRDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGV 909
Query: 300 -XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSL----------------SAT 342
W SKQ S + T
Sbjct: 910 PVTHGQPGKSLILAAMGSAAQRLRAGSTNHVWQSKQQAPSQQPAPQGQQQAPQQQQHTLT 1089
Query: 343 TSPVVDSKAQVKT---EGSAPGGHYTDQP--STSQIAYTSLSLPHYGSAFPSISRPQFDY 397
T + Q +T + +A HY++Q + QI+YTS +L HY S++P+I+R Q+DY
Sbjct: 1090TLSREQGQPQQRTSHQDRAAQPSHYSEQQQHTRQQISYTSFNLQHYSSSYPTITRSQYDY 1269
Query: 398 PDHQPSGPYYSHSS-QASGLYSAFSYMGPSQRPLYTAISDP--APSVPQSHSPTHWEQPV 454
DHQ S YYSH++ Q+S LYS F+YM P+QRP+YT I+D PS+PQ+HSP HWEQPV
Sbjct: 1270TDHQSSNAYYSHAAGQSSSLYSTFTYMNPTQRPMYTPIADTTGVPSIPQTHSPQHWEQPV 1449
Query: 455 YTTLSR 460
YT L+R
Sbjct: 1450YTQLTR 1467
>gb|AF029696.1|AF029696 Sus scrofa SOX-9 protein mRNA, complete cds
Length = 1835
Score = 439 bits (1128), Expect = e-121
Identities = 245/495 (49%), Positives = 298/495 (59%), Gaps = 57/495 (11%)
Frame = +1
Query: 24 SPGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVCIREAVSQV 73
+P P+M+ + SG+G + + Q+++ E+++DKFPVCIREAVSQV
Sbjct: 64 APSPTMSEGSRGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQV 243
Query: 74 LSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 133
L GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG
Sbjct: 244 LKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 423
Query: 134 KLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXXXXXXXX 193
KLWRLLNES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 424 KLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK---NGQAEAEEATEQTH 594
Query: 194 XSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTELQAGKADSKRE 252
S A +K D H G MS+ H P SGQS G KT++Q GKAD KRE
Sbjct: 595 ISPNAIFKALQADSPHSSSG--MSEVHSPGEHSGQSQGPPTPPTTPKTDVQPGKADLKRE 768
Query: 253 GRSLGEGGK-PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXX-XXXXXXXXXXX 310
GR L EGG+ P IDF +VDIGE+S +V+SN+ETFDVNEFDQYLPPN
Sbjct: 769 GRPLPEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTY 948
Query: 311 XXXXXXXXXXXXXXXXXXXWISKQHG---------------------------------- 336
W+SKQ
Sbjct: 949 TGSYGISSTAATPAGAGHVWMSKQQAPPPPPHPPQQPPPVPQAPAQPQAALPQQPQAPPQ 1128
Query: 337 -----VSLSATTSPVVDSKAQVKTEGSAPGGHYTDQP--STSQIAYTSLSLPHYGSAFPS 389
+ ++ P + +KTE +P HY++Q S QIAY+ +LPHY ++P
Sbjct: 1129QPQAHTLTTLSSEPGQSQRTHIKTEQLSP-SHYSEQQQHSPQQIAYSPFNLPHYSPSYPP 1305
Query: 390 ISRPQFDYPDHQPSGPYYSHS-SQASGLYSAFSYMGPSQRPLYTAISDPA--PSVPQSHS 446
I+R Q+DY DHQ SG YYSH+ SQ S LYS F+YM P+ P+YT I+D + PS+PQ+HS
Sbjct: 1306ITRSQYDYTDHQNSGSYYSHARSQGSVLYSTFTYMNPAHGPMYTPIADTSGVPSIPQTHS 1485
Query: 447 PTHWEQPVYTTLSRP 461
P HWEQPVYT L+RP
Sbjct: 1486PQHWEQPVYTQLTRP 1530
>gb|U12533.1|GGU12533 Gallus gallus Sox9 transcription factor (Sox9) mRNA, complete cds
Length = 1544
Score = 422 bits (1084), Expect = e-116
Identities = 238/480 (49%), Positives = 292/480 (60%), Gaps = 42/480 (8%)
Frame = +3
Query: 24 SPGPSMASDNSSHLASSGNGEMGKVKKEQQDS-----------EADDDKFPVCIREAVSQ 72
+P P+M+ D++ SG+G + + Q++ E+D+DKFPVCIREAVSQ
Sbjct: 66 APSPTMSDDSAGSPCPSGSGSDTENTRPPQENTFPKGDPDLKKESDEDKFPVCIREAVSQ 245
Query: 73 VLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTL 132
VL GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTL
Sbjct: 246 VLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTL 425
Query: 133 GKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXXXXXXX 192
GKLWRLLNES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK K
Sbjct: 426 GKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKTVK---NGQSEQEEGSEQT 596
Query: 193 XXSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTEL-QAGKADSK 250
S A +K D P S +S+ H P SGQS G KT+ Q GK D K
Sbjct: 597 HISPNAIFKALQAD--SPQSSSSISEVHSPGEHSGQSQGPPTPPTTPKTDAQQPGKQDLK 770
Query: 251 REGRSLGEGGK--PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNX--XXXXXXXX 306
REG L EGG+ PHIDF +VDIGE+S +V+SN+ETFDVNEFDQYLPPN
Sbjct: 771 REG-PLAEGGRQPPHIDFRDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQ 947
Query: 307 XXXXXXXXXXXXXXXXXXXXXXXWISK--------------QHGVSLSATTSPVVDSKAQ 352
W++K QH + + +
Sbjct: 948 VTTYSGTYGISSSASSPAGAGHAWMAKQQPQPPQPPAQPPAQHTLPSTEREQGPAQQRPH 1127
Query: 353 VKTEGSAPGGH-------YTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGP 405
+KTE +P + Q Q+ Y S +L HYG ++P I+R ++DY +HQ SG
Sbjct: 1128IKTEQLSPSHNSEQQQHPEQQQQQQQQLGYGSFNLQHYGFSYPPITRSEYDYTEHQNSGS 1307
Query: 406 YYSHSSQASG-LYSAFSYMGPSQRPLYTAISDPA--PSVPQSHSP-THWEQPVYTTLSRP 461
YYSH++ SG LYS F+YM P+QRP+YT I+D + P++PQ+HSP HWEQPVYT L+RP
Sbjct: 1308YYSHAAGQSGSLYSTFTYMNPTQRPMYTPIADTSGVPTIPQTHSPQQHWEQPVYTQLTRP 1487
>gb|AF378150.1|AF378150 Monopterus albus HMG box transcription factor Sox9a mRNA, complete
cds
Length = 1625
Score = 410 bits (1055), Expect = e-112
Identities = 237/478 (49%), Positives = 287/478 (59%), Gaps = 34/478 (7%)
Frame = +1
Query: 18 EDHHCLSPGPSMASDNSSHLASSGNGEMGKVKKEQQD---------SEADDDKFPVCIRE 68
E H +P PSM+ D++ SG+G + + + E +++KFPVCIR+
Sbjct: 154 EKCHSDAPSPSMSEDSAGSPCPSGSGSDTENTRPSDNHLLRGPDYKKEGEEEKFPVCIRD 333
Query: 69 AVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAEL 128
AVSQVL GYDWTLVPMPVRVNGS K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAEL
Sbjct: 334 AVSQVLKGYDWTLVPMPVRVNGSTKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAEL 513
Query: 129 SKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRR---KNGKXXXXXXXXX 185
SKTLGKLWRLLNE +KRPF+EEAERLR+QHKKDHPDYKYQPRRR KNG+
Sbjct: 514 SKTLGKLWRLLNEVEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQNEPEDSEQT 693
Query: 186 XXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTELQA 244
++Q + S M + H P SGQS G KT+L +
Sbjct: 694 HISPNAIFKALQ----------QADSPASSMGEVHSPGDHSGQSQGPPTPPTTPKTDLSS 843
Query: 245 GKADSKREGRSLGEG--GKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXXX-- 300
KAD KREGR + EG + +IDFG VDIGE+S +V+SNM +FDV+EFDQYLPP+
Sbjct: 844 SKADLKREGRPMQEGTSRQLNIDFGAVDIGELSSDVISNMGSFDVDEFDQYLPPHSHAGV 1023
Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSL---SATT--------SPVVDS 349
W+SKQ S TT
Sbjct: 1024TGTVQTGYTNSYNISSPSVVQAANAGAHTWVSKQQQQQQQQHSLTTLGGGGEQGQQGQQR 1203
Query: 350 KAQVKTEGSAPGGHYTDQPSTSQIAYTSLSLPHYG-SAFPSISRPQFDYPDHQ-PSGPYY 407
AQ+KTE +P Q S + Y S +L HY S++PSI+R Q+DY DHQ + YY
Sbjct: 1204TAQIKTEQLSPSHFSEQQGSPQHVTYGSFNLQHYSTSSYPSITRAQYDYSDHQGGANSYY 1383
Query: 408 SHSS-QASGLYSAFSYMGPSQRPLYTAISDP--APSVPQSHSPTHWE-QPVYTTLSRP 461
SH++ Q SGL+S FSYM P+QRP+YT I+D PSVPQ+HSP HWE QP+YT LSRP
Sbjct: 1384SHAAGQGSGLHSTFSYMNPNQRPMYTPIADTTGVPSVPQTHSPQHWEQQPIYTQLSRP 1557
>dbj|AB006448.1|AB006448 Oncorhynchus mykiss SOX9 mRNA, complete cds
Length = 3217
Score = 409 bits (1051), Expect = e-112
Identities = 244/493 (49%), Positives = 290/493 (58%), Gaps = 49/493 (9%)
Frame = +3
Query: 18 EDHHCLS--PGPSMASDN-------------------SSHLASSGNGEMGKVKKEQQDSE 56
E C S P PSM+ D+ +HL +G +G+ KK
Sbjct: 225 EQEKCFSDAPSPSMSEDSVGSPCPSGSGSDTENTRPSDNHLLLGPDGVLGEFKK------ 386
Query: 57 ADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKL 116
AD DKFPVCIR+AVSQVL GYDWTLVPMPVR+NGS+K+KPHVKRPMNAFMVWAQAARRKL
Sbjct: 387 ADQDKFPVCIRDAVSQVLKGYDWTLVPMPVRLNGSSKNKPHVKRPMNAFMVWAQAARRKL 566
Query: 117 ADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRR---K 173
ADQYPHLHNAELSKTLGKLWRLLNE +KRPF+EEAERLR+QHKKDHPDYKYQPRRR K
Sbjct: 567 ADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK 746
Query: 174 NGKXXXXXXXXXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXX 232
NG+ ++Q + S M + H P SGQS G
Sbjct: 747 NGQSEPEDGEQTHISSGDIFKALQ----------QADSPASSMGEVHSPSEHSGQSQGPP 896
Query: 233 XXXXXXKTELQAGKADSKREGRSL--GEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEF 290
KT+L GKAD KREGR L G G + +IDF +VDIGE+S +V+SN+E FDV+EF
Sbjct: 897 TPPTTPKTDLAVGKADLKREGRPLQEGTGRQLNIDFRDVDIGELSSDVISNIEAFDVHEF 1076
Query: 291 DQYLPPNXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQH---------GV 337
DQYLPP+ W+SKQ G
Sbjct: 1077DQYLPPHGHPGMPGINGAQTSYTGSYRGISSNSIGQVGAGGHGWMSKQQQQPISILSGGG 1256
Query: 338 SLSATTSPVVDSKAQVKTEGSAPGGHYTDQPST--SQIAYTSLSLPHY-GSAFPSISRPQ 394
Q+KTE +P HY++Q + + Y S +L HY S++PSI+R Q
Sbjct: 1257GTGGEQGQSQGRTTQIKTEQLSP-SHYSEQQGSPPQHVTYGSFNLQHYSASSYPSITRTQ 1433
Query: 395 FDYPDHQ-PSGPYYSHS-SQASGLYSAFSYMGPSQRPLYTAISDP--APSVP-QSHSPTH 449
+DY DHQ + YYSH+ +Q SGLYS SYM PSQRP+YT I+DP PSVP Q+HSP H
Sbjct: 1434YDYSDHQGGANSYYSHAGAQGSGLYSFSSYMSPSQRPMYTPIADPTGVPSVPTQTHSPQH 1613
Query: 450 WE-QPVYTTLSRP 461
WE QPVYT LSRP
Sbjct: 1614WEQQPVYTQLSRP 1652
>gb|AF209872.1|AF209872 Oncorhynchus mykiss SOX9 alpha2 (SOX9) mRNA, complete cds
Length = 3336
Score = 409 bits (1050), Expect = e-112
Identities = 250/492 (50%), Positives = 300/492 (60%), Gaps = 31/492 (6%)
Frame = +1
Query: 1 MADDQD--LSEVEMSPVGSEDHHCLSPGPSMASDNSSHLASSGNGE-MGKVKKEQQDSEA 57
M D+QD LS+ SP SED SP PS + ++ + S NG MG + +
Sbjct: 319 MTDEQDKCLSDAP-SPSMSEDS-VGSPCPSGSGSDTENTRPSENGLLMGPDGPLVEFKKD 492
Query: 58 DDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLA 117
DDDKFPVCIR+AVSQVL GYDWTLVPMPVR+NGS+K+KPHVKRPMNAFMVWAQAARRKLA
Sbjct: 493 DDDKFPVCIRDAVSQVLKGYDWTLVPMPVRMNGSSKNKPHVKRPMNAFMVWAQAARRKLA 672
Query: 118 DQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKX 177
DQYPHLHNAELSKTLGKLWRLLNE +KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 673 DQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSMKN 852
Query: 178 XXXXXXXXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHG--XXXX 234
+I + A S M + H P SGQS G
Sbjct: 853 GQSESDDGSEQTHISPGAIFKVLQQA------DSPASSMGEMHSPGEHSGQSQGPPTPPT 1014
Query: 235 XXXXKTELQAGKADSKREGRSL--GEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQ 292
KT++Q GK D KREGR L G G + +IDF +VDIGE+S +V+S++ETFDVNEFDQ
Sbjct: 1015TPPTKTDIQVGKVDLKREGRPLHEGTGRQLNIDFRDVDIGELSSDVISHIETFDVNEFDQ 1194
Query: 293 YLPPNX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVV 347
YLPPN W++K S TT
Sbjct: 1195YLPPNGHPGAPGAATGQVSYTGTYGISSSVVSQAAGGATGHSWMTKSQQQQHSLTTLGSG 1374
Query: 348 DSKAQ-------VKTEGSAPGGHYTDQPSTS---QIAYTSLSLPHY-GSAFPSISRPQFD 396
+ Q +KTE +P HY DQ S+S + Y S +L H+ S++PSI+R Q+D
Sbjct: 1375GEQGQNQRTPTHIKTEQLSP-SHYNDQQSSSPPQHVNYGSFNLQHFSSSSYPSITRGQYD 1551
Query: 397 YPDHQ-PSGPYYSHSS--QASGLYSAFSYMGPSQRPLYTAISDP--APSVPQSHSPT-HW 450
+ DHQ + YYSH++ Q SGLYS SYM PSQRP+YT I+D PSVPQ+HSP HW
Sbjct: 1552FSDHQGGTNSYYSHTAGGQGSGLYSFSSYMSPSQRPMYTPIADTTGVPSVPQTHSPQHHW 1731
Query: 451 -EQPVYTTLSRP 461
+QPVYT LSRP
Sbjct: 1732DQQPVYTQLSRP 1767
>gb|AF277096.1|AF277096 Danio rerio HMG box transcription factor Sox9a (sox9a) mRNA,
complete cds
Length = 1790
Score = 397 bits (1020), Expect = e-108
Identities = 238/478 (49%), Positives = 289/478 (59%), Gaps = 34/478 (7%)
Frame = +2
Query: 18 EDHHCLS--PGPSMASDNSSHLASSGNGEMGKVKKEQQDS------------EADDDKFP 63
E CLS P PSM+ D++ S +G + + ++S + ++DKFP
Sbjct: 203 EQEKCLSDAPSPSMSEDSAGSPCPSASGSDTENTRPAENSLLAADGTLGDFKKDEEDKFP 382
Query: 64 VCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHL 123
VCIREAVSQVL GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHL
Sbjct: 383 VCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHL 562
Query: 124 HNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXX 183
HNAELSKTLGKLWRLLNE +KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 563 HNAELSKTLGKLWRLLNEVEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQSESE 742
Query: 184 XXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTEL 242
+I + A S M + H P SGQS G KT+
Sbjct: 743 DGSEQTHISPNAIFKALQQA------DSPASSMGEVHSPSEHSGQSQGPPTPPTTPKTDT 904
Query: 243 QAGKADSKREGRSLGEG-GKP-HIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXXX 300
Q GKAD KRE R L E G+P I+F +VDIGE+S +V +ETFDVNEFDQYLPPN
Sbjct: 905 QPGKADLKREARPLQENTGRPLSINFQDVDIGELSSDV---IETFDVNEFDQYLPPN--- 1066
Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISK-QHGVSLSATTSPVVDSK------AQV 353
W++K Q+G S+ +P+ ++ +
Sbjct: 1067----------------GHQNAPYAGGYAAWMTKPQNGSPQSSQLTPLNPAEPDQPRTTHI 1198
Query: 354 KTEGSAPGGHYTDQPSTSQIAYTSLS---LPHYGSAFPSISRPQFDYPDHQPSG--PYYS 408
KTE +P + Q S I+Y S + L HY ++FPSI+R Q+DY D G YY+
Sbjct: 1199KTEQLSPSHYNEQQGSPQHISYGSFNVQHLQHYSTSFPSITRAQYDYSDSHQGGASSYYT 1378
Query: 409 HS-SQASGLYSAFSYMGPSQRPLYTAISDP--APSVPQS-HSPTHW-EQPVYTTLSRP 461
H+ Q+SGLYS FSYM SQRP+YT I+D PS+PQS HSP HW +QPVYT LSRP
Sbjct: 1379HAGGQSSGLYSTFSYMSSSQRPMYTPIADSTGVPSIPQSNHSPQHWDQQPVYTQLSRP 1552
>gb|AF378151.1|AF378151 Monopterus albus HMG box transcription factor Sox9b mRNA, complete
cds
Length = 1557
Score = 386 bits (991), Expect = e-105
Identities = 237/487 (48%), Positives = 286/487 (58%), Gaps = 43/487 (8%)
Frame = +2
Query: 18 EDHHCLS--PGPSMASDNSSHLASSGNG---------EMGKVKKEQQDSEA---DDDKFP 63
E CLS P PS++ D++ SG+G E G ++ + S+ +DDKFP
Sbjct: 68 EQDKCLSDAPSPSISEDSAGSPCPSGSGSDTENTRPSENGLLRTDGTLSDFKKDEDDKFP 247
Query: 64 VCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHL 123
CIREAVSQVL GYDWTLVPMPVRVNGS K+KPHVKRPMNAFMVWAQAARRKLADQYPHL
Sbjct: 248 ACIREAVSQVLKGYDWTLVPMPVRVNGSTKNKPHVKRPMNAFMVWAQAARRKLADQYPHL 427
Query: 124 HNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXX 183
HNAELSKTLGKLWRLLNE +KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 428 HNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK------- 586
Query: 184 XXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGXXXXXXXXKTELQ 243
S Q H + S M + H S G KT++
Sbjct: 587 --NGQSEPEDGSEQTHNAIFKALQQADSPASSMGEVHSPSEHSGSQGPPTPPTTPKTDVT 760
Query: 244 AGKADSKREG--RSL--GEGGKP-HIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNX 298
+GK D KREG RSL G GG+ IDF +VDIGE S +V+S++ETFDVNEFDQYLPPN
Sbjct: 761 SGKMDLKREGGLRSLPDGSGGRQLDIDFHDVDIGEFSSDVISHIETFDVNEFDQYLPPN- 937
Query: 299 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISK---QHGVSLSATT--------SPVV 347
W++K G + TT +
Sbjct: 938 GHPGTTPVSYTGSYSISSSAPVSPQPGGATAWMAKTQNPQGQQQTLTTLGSSGGSEAASA 1117
Query: 348 DSKAQVKTEGSAPGGHYTDQPSTSQIAYTSLSLPHYG--SAFPSISR-PQFDYPDH---- 400
+ Q+KTE +P + Q S +AY+ +L HY S++P+ISR Q+DY DH
Sbjct: 1118QHRTQIKTEQLSPSHYSEQQGSPQHVAYSPFNLQHYSSPSSYPAISRAQQYDYSDHHGGS 1297
Query: 401 QPSGPYYSH--SSQASGLYSAFSYM-GPSQRPLYTAISDP--APSVPQSHSPTHWEQ-PV 454
+ YYSH + Q+ GLYS FSYM PSQRP+YT I+D PS+PQ +SP HWEQ PV
Sbjct: 1298STTASYYSHAGAGQSPGLYSTFSYMSSPSQRPMYTPIADTTGVPSIPQ-NSPQHWEQAPV 1474
Query: 455 YTTLSRP 461
YT L+RP
Sbjct: 1475YTQLTRP 1495
>dbj|D83256.1|ONHSOXP1 Oncorhynchus mykiss mRNA for SoxP1, complete cds
Length = 3626
Score = 356 bits (914), Expect = 2e-96
Identities = 221/479 (46%), Positives = 271/479 (56%), Gaps = 21/479 (4%)
Frame = +1
Query: 4 DQDLSEVEMSPVGSEDHHCLSPGPSMASDNSSHLASSGNGEMGKVKKEQQDSEADDDKFP 63
D+ +S+ SP G+ +S S + SS S G+ G KK D E DDD+FP
Sbjct: 277 DKSISDPPCSPAGTTSS--MSQDDSDSDAPSSPTGSDGSLLAGIGKK--LDGE-DDDRFP 441
Query: 64 VCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHL 123
CIR+AVSQVL GYDW+LVPMPVR NGS K+KPHVKRPMNAFMVWAQAARRKLADQYPHL
Sbjct: 442 ACIRDAVSQVLKGYDWSLVPMPVRGNGSLKNKPHVKRPMNAFMVWAQAARRKLADQYPHL 621
Query: 124 HNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXX 183
HNAELSKTLGKLWRLL+E++KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 622 HNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKPGQSDSD 801
Query: 184 XXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDG--HPEHSSGQSHGXXXXXXXXKTE 241
H+ PG + ++DG HPEH +GQ HG KT+
Sbjct: 802 SGAEL-------------GNHMYKAEPGLLAGIADGHHHPEH-AGQPHGPPTPPTTPKTD 939
Query: 242 L-QAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXXX 300
L GK D K EGR L + G+ +IDF NVDI E+S +V+SNME FDV+EFDQYLP N
Sbjct: 940 LHHGGKLDMKHEGRRLLDSGRQNIDFSNVDISELSTDVISNMEAFDVHEFDQYLPLNGHA 1119
Query: 301 XXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTS--PVVDSKA 351
W K +S S++TS V +A
Sbjct: 1120STAGVGVDHHGHHGPNPASGAISYTSYSHATANGAVWSRKSATMSASSSTSSEAVPQHRA 1299
Query: 352 QVKTEGSAPG-----GHYTDQPSTSQI--AYTSLSLPHYGSAFPSISRPQFDYPDHQPSG 404
+KTE +P H PS S +YT+ + +A S S Q DY D Q S
Sbjct: 1300HIKTEQLSPSHYSGDSHSHSSPSHSDYSHSYTAQTCVTSSAAAASFSSSQCDYTDLQSSN 1479
Query: 405 PYYSHSSQASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSP--THWEQPVYTTLSRP 461
Y +S S LY + Y S+R + + S+P +HSP ++W+QPVYTTLSRP
Sbjct: 1480YYNPYSGYPSSLYQ-YPYFHSSRRAYHGSPILNTLSIPPTHSPPTSNWDQPVYTTLSRP 1653
>gb|AF228664.1|AF228664 Gallus gallus SOX8 transcription factor (SOX8) mRNA, complete cds
Length = 1650
Score = 348 bits (894), Expect = 5e-94
Identities = 212/466 (45%), Positives = 266/466 (56%), Gaps = 12/466 (2%)
Frame = +1
Query: 8 SEVEMSPVGSEDHHCLSPGPSMASDNSSHLASSGNGEMGKVKKEQQDSEADDDKFPVCIR 67
S+ +SP GSE C +P P+ ++ L + + D+ D++FP CIR
Sbjct: 94 SDSPLSPAGSEGLGC-APAPAPRPPGAAPLGA------------KVDAAEVDERFPACIR 234
Query: 68 EAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAE 127
+AVSQVL GYDW+LVPMPVR NGS K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAE
Sbjct: 235 DAVSQVLKGYDWSLVPMPVRGNGSLKAKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAE 414
Query: 128 LSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXX 187
LSKTLGKLWRLL+E++KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 415 LSKTLGKLWRLLSENEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKAGQSDSDSGAE 594
Query: 188 XXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDG--HPEHSSGQSHGXXXXXXXXKTELQAG 245
+H+ + G G M+DG H EH +GQ HG KT+L G
Sbjct: 595 L---------SHHAGTQIYKADSGLGG-MADGHHHGEH-AGQPHGPPTPPTTPKTDLHHG 741
Query: 246 -KADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXXXXXXX 304
K + K EGR L E G+ +IDF NVDI E+S EV++NMETFDV+EFDQYLP N
Sbjct: 742 SKQELKHEGRRLVESGRQNIDFSNVDISELSSEVINNMETFDVHEFDQYLPLNGHTAMPA 921
Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDSKAQVKTEGSAPGGHY 364
+ + S S +++ + +KTE +P HY
Sbjct: 922 DHGPGAGFYSTSYSHSAAGAGGAGQVWTHKSPASASPSSADSGQQRPHIKTEQLSP-SHY 1098
Query: 365 TDQP--STSQIAYTSLS------LPHYGSAFPSISRPQFDYPDHQPSGPYYSHSSQASGL 416
+DQ S + Y S S +A S S Q DY D Q S Y + S +
Sbjct: 1099SDQSHGSPAHSDYGSYSTQACATTASTATAAASFSSSQCDYTDLQSSNYYNPYPGYPSSI 1278
Query: 417 YSAFSYMGPSQRPLYTAISDPAPSVPQSHSPT-HWEQPVYTTLSRP 461
Y + Y S+RP T I + S+P +HSPT +W+QPVYTTL+RP
Sbjct: 1279YQ-YPYFHSSRRPYATPILN-GLSIPPAHSPTANWDQPVYTTLTRP 1410
>emb|AL031587.3|HS1039K5 Human DNA sequence from clone RP5-1039K5 on chromosome 22q12.3-13.2
Contains the POLR2F gene for DNA directed RNA polymerase
IIF, the SOX10 gene for SRY (sex-determining region Y)-box
10, the PRKCABP gene for protein kinase C alpha binding
protein, the>
Length = 142723
Score = 340 bits (871), Expect = 2e-91
Identities = 171/238 (71%), Positives = 179/238 (74%), Gaps = 2/238 (0%)
Frame = -1
Query: 226 GQSHGXXXXXXXXKTELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETF 285
GQSHG KTELQ+GKAD KR+GRS+GEGGKPHIDFGNVDIGEISHEVMSNMETF
Sbjct: 31477 GQSHGPPTPPTTPKTELQSGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETF 31298
Query: 286 DVNEFDQYLPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSP 345
DV E DQYLPPN WISK GV+L + P
Sbjct: 31297 DVAELDQYLPPNGHPGHVSSYSAAGYGLGSALAVASGHSA----WISKPPGVALPTVSPP 31130
Query: 346 VVDSKAQVKTEGSAPGG--HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPS 403
VD+KAQVKTE + P G HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDY DHQPS
Sbjct: 31129 GVDAKAQVKTETAGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPS 30950
Query: 404 GPYYSHSSQASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 461
GPYY HS QASGLYSAFSYMGPSQRPLYTAISDP+PS PQSHSPTHWEQPVYTTLSRP
Sbjct: 30949 GPYYGHSGQASGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP 30776
Score = 236 bits (601), Expect = 4e-60
Identities = 118/143 (82%), Positives = 126/143 (87%), Gaps = 6/143 (4%)
Frame = -1
Query: 1 MADDQDLSEVEMSPVGSEDHHCLSPG--PSMASDN----SSHLASSGNGEMGKVKKEQQD 54
MA++QDLSEVE+SPVGSE+ CLSPG PS+ D S AS G GE+GKVKKEQQD
Sbjct: 41062 MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQD 40883
Query: 55 SEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARR 114
EADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNG++KSKPHVKRPMNAFMVWAQAARR
Sbjct: 40882 GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR 40703
Query: 115 KLADQYPHLHNAELSKTLGKLWR 137
KLADQYPHLHNAELSKTLGKLWR
Sbjct: 40702 KLADQYPHLHNAELSKTLGKLWR 40634
Score = 142 bits (358), Expect = 7e-32
Identities = 68/92 (73%), Positives = 72/92 (77%), Gaps = 1/92 (1%)
Frame = -2
Query: 137 RLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXX-XXXXXXXXXXXS 195
RLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK +
Sbjct: 35415 RLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGEAECPGGEAEQGGTAA 35236
Query: 196 IQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQ 227
IQAHYK+AHLDHRHPGEGSPMSDG+PEH SG+
Sbjct: 35235 IQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGE 35140
>gb|AF006501.4|AF006501 Homo sapiens chromosome 22q13.1 Cosmid Clone c1155, complete sequence
Length = 40129
Score = 340 bits (871), Expect = 2e-91
Identities = 171/238 (71%), Positives = 179/238 (74%), Gaps = 2/238 (0%)
Frame = -2
Query: 226 GQSHGXXXXXXXXKTELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETF 285
GQSHG KTELQ+GKAD KR+GRS+GEGGKPHIDFGNVDIGEISHEVMSNMETF
Sbjct: 27534 GQSHGPPTPPTTPKTELQSGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETF 27355
Query: 286 DVNEFDQYLPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSP 345
DV E DQYLPPN WISK GV+L + P
Sbjct: 27354 DVAELDQYLPPNGHPGHVSSYSAAGYGLGSALAVASGHSA----WISKPPGVALPTVSPP 27187
Query: 346 VVDSKAQVKTEGSAPGG--HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPS 403
VD+KAQVKTE + P G HYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDY DHQPS
Sbjct: 27186 GVDAKAQVKTETAGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPS 27007
Query: 404 GPYYSHSSQASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP 461
GPYY HS QASGLYSAFSYMGPSQRPLYTAISDP+PS PQSHSPTHWEQPVYTTLSRP
Sbjct: 27006 GPYYGHSGQASGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP 26833
Score = 236 bits (601), Expect = 4e-60
Identities = 118/143 (82%), Positives = 126/143 (87%), Gaps = 6/143 (4%)
Frame = -2
Query: 1 MADDQDLSEVEMSPVGSEDHHCLSPG--PSMASDN----SSHLASSGNGEMGKVKKEQQD 54
MA++QDLSEVE+SPVGSE+ CLSPG PS+ D S AS G GE+GKVKKEQQD
Sbjct: 37119 MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQD 36940
Query: 55 SEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARR 114
EADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNG++KSKPHVKRPMNAFMVWAQAARR
Sbjct: 36939 GEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARR 36760
Query: 115 KLADQYPHLHNAELSKTLGKLWR 137
KLADQYPHLHNAELSKTLGKLWR
Sbjct: 36759 KLADQYPHLHNAELSKTLGKLWR 36691
Score = 142 bits (358), Expect = 7e-32
Identities = 68/92 (73%), Positives = 72/92 (77%), Gaps = 1/92 (1%)
Frame = -3
Query: 137 RLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXX-XXXXXXXXXXXS 195
RLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK +
Sbjct: 31472 RLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGEAECPGGEAEQGGTAA 31293
Query: 196 IQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQ 227
IQAHYK+AHLDHRHPGEGSPMSDG+PEH SG+
Sbjct: 31292 IQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGE 31197
>gb|AF277097.1|AF277097 Danio rerio HMG box transcription factor Sox9b (sox9b) mRNA,
complete cds
Length = 1916
Score = 328 bits (842), Expect = 5e-88
Identities = 210/447 (46%), Positives = 249/447 (54%), Gaps = 9/447 (2%)
Frame = +2
Query: 24 SPGPSMASDNS-SHLASSGNGEMGKVKKEQQDSEADD-DKFPVCIREAVSQVLSGYDWTL 81
+P PS++ D++ S AS+G+G + + + D+ +KFPVCIR+AVSQVL GYDW+L
Sbjct: 197 APSPSLSEDSAGSPCASAGSGSDSETPRAEPPLHRDEQEKFPVCIRDAVSQVLKGYDWSL 376
Query: 82 VPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNE 141
VPMPVRV+GS KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNE
Sbjct: 377 VPMPVRVSGSGKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNE 556
Query: 142 SDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXXXXXXXXXSIQAHYK 201
+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K +A
Sbjct: 557 GEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKSGSAESEDGEQTQISTNALFRA--- 727
Query: 202 NAHLDHRHPGEGSPMSDGHPEHSSGQSHGXXXXXXXXKTELQ-AGKADSKRE-----GRS 255
L + S P SGQS G KT+L KAD KRE R
Sbjct: 728 ---LQRAETPDSSTGELHSPGEHSGQSQGPPTPPTTPKTDLPVCSKADLKRERERDRERP 898
Query: 256 LGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXXXXXXXXXXXXXXXXXX 315
L +G IDFG VDIGE+S +V+SN+E FDVNEFDQYLPP+
Sbjct: 899 LQDG----IDFGAVDIGELSSDVISNIEAFDVNEFDQYLPPH--------------GAPG 1024
Query: 316 XXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDSKAQVKTEGSAPGGHYTDQPSTSQIAY 375
W+ K S A +AQ+KTE +P GHY+ QP Q
Sbjct: 1025PAGAGFSSGYGSAAWMHKPLASSSMANAGEQHQQRAQIKTEQLSP-GHYSQQPPQQQF-- 1195
Query: 376 TSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSSQASGLYSAFSYMGPSQRPLYTAIS 435
S P+ SR Q+ Q S YYS Y FSY RP YT
Sbjct: 1196--YSAPY--------SRAQYTEYSEQHSA-YYSP-------YPTFSY----SRPPYT--- 1300
Query: 436 DPAPSVPQSHSPTHWE-QPVYTTLSRP 461
PA + +H+ HW+ QPVYT LSRP
Sbjct: 1301-PAAAADTAHT-HHWDPQPVYTQLSRP 1375
>ref|NM_014587.1| Homo sapiens SRY (sex determining region Y)-box 8 (SOX8), mRNA
Length = 1563
Score = 325 bits (834), Expect = 4e-87
Identities = 210/484 (43%), Positives = 259/484 (53%), Gaps = 28/484 (5%)
Frame = +1
Query: 6 DLSEVEMSPVGSEDHHCLSPGPSMASDNSSHLASSGNGEMGKVK-----KEQQDSEADDD 60
D+SE P S S SD+ + + +G+ +G+ +EA D+
Sbjct: 229 DMSEARSQPPCSPSGTASSMSHVEDSDSDAPPSPAGSEGLGRAGVAVGGARGDPAEAADE 408
Query: 61 KFPVCIREAVSQVLSGYDWTLVPMPVRVNGSN--KSKPHVKRPMNAFMVWAQAARRKLAD 118
+FP CIR+AVSQVL GYDW+LVPMPVR G K+KPHVKRPMNAFMVWAQAARRKLAD
Sbjct: 409 RFPACIRDAVSQVLKGYDWSLVPMPVRGGGGGALKAKPHVKRPMNAFMVWAQAARRKLAD 588
Query: 119 QYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXX 178
QYPHLHNAELSKTLGKLWRLL+ES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 589 QYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKAG 768
Query: 179 XXXXXXXXXXXXXXXXSIQAHYKNAHLDHRHPGEG------SPMSDGHPE-HSSGQSHGX 231
HPG G + + DGH +GQ+HG
Sbjct: 769 HSDSDSGAELG------------------PHPGGGAVYKAEAGLGDGHHHGDHTGQTHGP 894
Query: 232 XXXXXXXKTELQ--AGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNE 289
KTELQ K + K EGR + G+ +IDF NVDI E+S EVM M+ FDV+E
Sbjct: 895 PTPPTTPKTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHE 1074
Query: 290 FDQYLPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDS 349
FDQYLP W K S SA+ +
Sbjct: 1075FDQYLP---------LGGPAPPEPGQAYGGAYFHAGASPVWAHKS-APSASASPTETGPP 1224
Query: 350 KAQVKTEGSAPGGHYTDQPSTSQIAYTSLSLPHYG------SAFPS-----ISRPQFDYP 398
+ +KTE +P GHY DQP S P YG SA P+ + Q DY
Sbjct: 1225RPHIKTEQPSP-GHYGDQPRGS---------PDYGSCSGQSSATPAAPAGPFAGSQGDYG 1374
Query: 399 DHQPSGPYYSHSSQASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPT-HWEQPVYTT 457
D Q S Y ++ A GLY + P +RP + + + ++P +HSPT HW+QPVYTT
Sbjct: 1375DLQASSYYGAYPGYAPGLYQYPCFHSP-RRPYASPLLN-GLALPPAHSPTSHWDQPVYTT 1548
Query: 458 LSRP 461
L+RP
Sbjct: 1549LTRP 1560
>gb|AF226675.1|AF226675 Homo sapiens transcription factor SOX8 mRNA, complete cds
Length = 1341
Score = 325 bits (834), Expect = 4e-87
Identities = 210/484 (43%), Positives = 259/484 (53%), Gaps = 28/484 (5%)
Frame = +1
Query: 6 DLSEVEMSPVGSEDHHCLSPGPSMASDNSSHLASSGNGEMGKVK-----KEQQDSEADDD 60
D+SE P S S SD+ + + +G+ +G+ +EA D+
Sbjct: 7 DMSEARSQPPCSPSGTASSMSHVEDSDSDAPPSPAGSEGLGRAGVAVGGARGDPAEAADE 186
Query: 61 KFPVCIREAVSQVLSGYDWTLVPMPVRVNGSN--KSKPHVKRPMNAFMVWAQAARRKLAD 118
+FP CIR+AVSQVL GYDW+LVPMPVR G K+KPHVKRPMNAFMVWAQAARRKLAD
Sbjct: 187 RFPACIRDAVSQVLKGYDWSLVPMPVRGGGGGALKAKPHVKRPMNAFMVWAQAARRKLAD 366
Query: 119 QYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXX 178
QYPHLHNAELSKTLGKLWRLL+ES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 367 QYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKAG 546
Query: 179 XXXXXXXXXXXXXXXXSIQAHYKNAHLDHRHPGEG------SPMSDGHPE-HSSGQSHGX 231
HPG G + + DGH +GQ+HG
Sbjct: 547 HSDSDSGAELG------------------PHPGGGAVYKAEAGLGDGHHHGDHTGQTHGP 672
Query: 232 XXXXXXXKTELQ--AGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNE 289
KTELQ K + K EGR + G+ +IDF NVDI E+S EVM M+ FDV+E
Sbjct: 673 PTPPTTPKTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHE 852
Query: 290 FDQYLPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDS 349
FDQYLP W K S SA+ +
Sbjct: 853 FDQYLP---------LGGPAPPEPGQAYGGAYFHAGASPVWAHKS-APSASASPTETGPP 1002
Query: 350 KAQVKTEGSAPGGHYTDQPSTSQIAYTSLSLPHYG------SAFPS-----ISRPQFDYP 398
+ +KTE +P GHY DQP S P YG SA P+ + Q DY
Sbjct: 1003RPHIKTEQPSP-GHYGDQPRGS---------PDYGSCSGQSSATPAAPAGPFAGSQGDYG 1152
Query: 399 DHQPSGPYYSHSSQASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPT-HWEQPVYTT 457
D Q S Y ++ A GLY + P +RP + + + ++P +HSPT HW+QPVYTT
Sbjct: 1153DLQASSYYGAYPGYAPGLYQYPCFHSP-RRPYASPLLN-GLALPPAHSPTSHWDQPVYTT 1326
Query: 458 LSRP 461
L+RP
Sbjct: 1327LTRP 1338
>dbj|AB035888.1|AB035888 Rana rugosa mRNA for sox9 beta, complete cds
Length = 1706
Score = 289 bits (740), Expect = 3e-76
Identities = 165/346 (47%), Positives = 201/346 (57%), Gaps = 21/346 (6%)
Frame = +3
Query: 137 RLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXXXXXXXXXSI 196
RLLNE++KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K S
Sbjct: 513 RLLNETEKRPFVEEAERLRIQHKKDHPDYKYQPRRRKSVK---NGQSEQEDGSDQTHISP 683
Query: 197 QAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQSHGXXXXXXXXKTELQAGKADSKREGRS 255
A +K D H S MS+ H P SGQS G KT++Q GK D KREGR
Sbjct: 684 NAIFKALQADSPH--SASSMSEVHSPGEHSGQSQGPPTPPTTPKTDVQPGKPDLKREGRP 857
Query: 256 LGEGGK--PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXXXXXXXXXXXXXXXX 313
L E G+ PHIDF +VDIGE+S EV+SN+ETFDVNEFDQYLPPN
Sbjct: 858 LQESGRQPPHIDFRDVDIGELSSEVISNIETFDVNEFDQYLPPN-GHPGVASTQVTYTGS 1034
Query: 314 XXXXXXXXXXXXXXXXWISK------------QHGVSLSATTSPVVDSKAQVKTEGSAPG 361
W+ K QHG+ + + +KTE +P
Sbjct: 1035YGISSAAGGPAGAGHAWMPKQPQQQPQQPQQQQHGLPTLSNEQSQAQQRTHIKTEQLSP- 1211
Query: 362 GHYTDQP---STSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSS-QASGLY 417
HY+DQ S Q+ YTS +L HYGS +P+I+R Q+DY +HQ S YYSH++ Q+S LY
Sbjct: 1212SHYSDQQQQHSPQQLNYTSFNLQHYGSTYPTITRSQYDYTEHQGSNSYYSHAAGQSSSLY 1391
Query: 418 SAFSYMGPSQRPLYTAISDP--APSVPQSHSPTHWEQPVYTTLSRP 461
S FSYM PSQRP+YT I+D PS+PQ+HSP HWEQPVYT L+RP
Sbjct: 1392STFSYMNPSQRPMYTPIADTTGVPSIPQTHSPQHWEQPVYTQLTRP 1529
>gb|AF061784.1|AF061784 Calotes versicolor Sox9 homolog mRNA, partial cds
Length = 773
Score = 278 bits (710), Expect = 1e-72
Identities = 152/257 (59%), Positives = 177/257 (68%), Gaps = 14/257 (5%)
Frame = +1
Query: 24 SPGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVCIREAVSQV 73
+P P+M+ D++ SG+G + + Q+++ E+D+DKFPVCIREAVSQ
Sbjct: 10 APSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKSDQDLKKESDEDKFPVCIREAVSQF 189
Query: 74 LSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 133
L GYDWTLVP PVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNA+LSKTLG
Sbjct: 190 LKGYDWTLVPRPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAQLSKTLG 369
Query: 134 KLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXXXXXXXX 193
KLWRLLNES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 370 KLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK---NGQAEQEEGSEQTH 540
Query: 194 XSIQAHYKNAHLDHRHPGEGSPMSDGH--PEHSSGQSHGXXXXXXXXKTELQAGKADSKR 251
S A +K D P S MS+ EH SGQS G KT++QAGK D KR
Sbjct: 541 ISPNAIFKALQAD--SPPSSSSMSESTRLGEH-SGQSQGPPTPPTIPKTDVQAGKQDLKR 711
Query: 252 EGRSLGEGGK--PHIDF 266
EGR L EGG+ PHIDF
Sbjct: 712 EGRPLQEGGRQPPHIDF 762
>ref|XM_027404.3| Homo sapiens similar to SRY (sex determining region Y)-box 8 (H.
sapiens) (LOC162052), mRNA
Length = 1230
Score = 269 bits (687), Expect = 5e-70
Identities = 181/445 (40%), Positives = 223/445 (49%), Gaps = 10/445 (2%)
Frame = +1
Query: 27 PSMASDNSSHLASSGNGEMGKVKKEQQDSEADDDKFPVCIREAVSQVLSGYDWTLVPMPV 86
P S+ + +G G +E +E +FP CIR+AVSQVL GYDW+LVPMP
Sbjct: 115 PRACSEGHGRMRGPPSGGQGLQGEEALQTE----RFPACIRDAVSQVLKGYDWSLVPMP- 279
Query: 87 RVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRP 146
AARRKLADQYPHLHNAELSKTLGKLWRLL+ES+KRP
Sbjct: 280 ------------------------AARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRP 387
Query: 147 FIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXXXXXXXXXSIQAHYKNAHLD 206
F+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 388 FVEEAERLRVQHKKDHPDYKYQPRRRKSAKAGHSDSDSGAELG----------------- 516
Query: 207 HRHPGEG------SPMSDGHPE-HSSGQSHGXXXXXXXXKTELQ--AGKADSKREGRSLG 257
HPG G + + DGH +GQ+HG KTELQ K + K EGR
Sbjct: 517 -PHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTPKTELQQAGAKPELKLEGRRPV 693
Query: 258 EGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXXXXXXXXXXXXXXXXXXXX 317
+ G+ +IDF NVDI E+S EVM M+ FDV+EFDQYLP
Sbjct: 694 DSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQYLP---------LGGPAPPEPGQAY 846
Query: 318 XXXXXXXXXXXXWISKQHGVSLSATTSPVVDSKAQVKTEGSAPGGHYTDQPSTSQIAYTS 377
W K S SA+ + + +KTE +P GHY DQP S
Sbjct: 847 GGAYFHAGASPVWAHKS-APSASASPTETGPPRPHIKTEQPSP-GHYGDQPRGS------ 1002
Query: 378 LSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSSQASGLYSAFSYMGPSQRPLYTAISDP 437
P YG + RP DY D Q S Y ++ A GLY + P +RP + + +
Sbjct: 1003---PDYG----FLQRPG-DYGDLQASSYYGAYPGYAPGLYQYPCFHSP-RRPYASPLLN- 1152
Query: 438 APSVPQSHSPT-HWEQPVYTTLSRP 461
++P +HSPT HW+QPVYTTL+RP
Sbjct: 1153GLALPPAHSPTSHWDQPVYTTLTRP 1227
>gb|AF278703.1|AF278703 Bos taurus transcription activator Sox9 mRNA, partial cds
Length = 557
Score = 247 bits (631), Expect = 1e-63
Identities = 118/163 (72%), Positives = 138/163 (84%), Gaps = 10/163 (6%)
Frame = +1
Query: 24 SPGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVCIREAVSQV 73
+P P+M+ D++ SG+G + + Q+++ E+++DKFPVCIREAVSQV
Sbjct: 61 APSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQV 240
Query: 74 LSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 133
L GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG
Sbjct: 241 LKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 420
Query: 134 KLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
KLWRLLNES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 421 KLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK 549
>dbj|AB073720.1|AB073720 Rattus norvegicus mRNA for Sry-related transcription factor Sox9,
partial cds
Length = 492
Score = 243 bits (620), Expect = 3e-62
Identities = 115/159 (72%), Positives = 135/159 (84%), Gaps = 10/159 (6%)
Frame = +1
Query: 24 SPGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVCIREAVSQV 73
+P P+M+ D++ SG+G + + Q+++ E+++DKFPVCIREAVSQV
Sbjct: 16 APSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQV 195
Query: 74 LSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 133
L GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG
Sbjct: 196 LKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 375
Query: 134 KLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRR 172
KLWRLLNES+KRPF+EEAERLR+QH+KDHPDYKYQPRRR
Sbjct: 376 KLWRLLNESEKRPFVEEAERLRVQHRKDHPDYKYQPRRR 492
>gb|AF164104.1|AF164104 Homo sapiens transcription factor SOX8 (SOX8) mRNA, partial cds
Length = 2579
Score = 227 bits (578), Expect = 2e-57
Identities = 153/368 (41%), Positives = 188/368 (50%), Gaps = 21/368 (5%)
Frame = +1
Query: 115 KLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKN 174
KLADQYPHLHNAELSKTLGKLWRLL+ES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+
Sbjct: 1 KLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKS 180
Query: 175 GKXXXXXXXXXXXXXXXXXXSIQAHYKNAHLDHRHPGEG------SPMSDGHPE-HSSGQ 227
K HPG G + + DGH +GQ
Sbjct: 181 AKAGHSDSDSGAELG------------------PHPGGGAVYKAEAGLGDGHHHGDHTGQ 306
Query: 228 SHGXXXXXXXXKTELQ--AGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETF 285
+HG KTELQ K + K EGR + G+ +IDF NVDI E+S EVM M+ F
Sbjct: 307 THGPPTPPTTPKTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGTMDAF 486
Query: 286 DVNEFDQYLPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSP 345
DV+EFDQYLP W K S SA+ +
Sbjct: 487 DVHEFDQYLP---------LGGPAPPEPGQAYGGAYFHAGASPVWAHKS-APSASASPTE 636
Query: 346 VVDSKAQVKTEGSAPGGHYTDQPSTSQIAYTSLSLPHYG------SAFPS-----ISRPQ 394
+ +KTE +P GHY DQP S P YG SA P+ + Q
Sbjct: 637 TGPPRPHIKTEQPSP-GHYGDQPRGS---------PDYGSCSGQSSATPAAPAGPFAGSQ 786
Query: 395 FDYPDHQPSGPYYSHSSQASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPT-HWEQP 453
DY D Q S Y ++ A GLY + P +RP + + + ++P +HSPT HW+QP
Sbjct: 787 GDYGDLQASSYYGAYPGYAPGLYQYPCFHSP-RRPYASPLLN-GLALPPAHSPTSHWDQP 960
Query: 454 VYTTLSRP 461
VYTTL+RP
Sbjct: 961 VYTTLTRP 984
>gb|AC007461.8|AC007461 Homo sapiens chromosome 17, clone 84_E_24, complete sequence
Length = 180385
Score = 206 bits (524), Expect = 4e-51
Identities = 118/284 (41%), Positives = 153/284 (53%), Gaps = 46/284 (16%)
Frame = -2
Query: 224 SSGQSHGXXXXXXXXKTELQAGKADSKREGRSLGEGGK-PHIDFGNVDIGEISHEVMSNM 282
S+GQS G KT++Q GKAD KREGR L EGG+ P IDF +VDIGE+S +V+SN+
Sbjct: 61740 STGQSQGPPTPPTTPKTDVQPGKADLKREGRPLPEGGRQPPIDFRDVDIGELSSDVISNI 61561
Query: 283 ETFDVNEFDQYLPPNXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHG----- 336
ETFDVNEFDQYLPPN W+SKQ
Sbjct: 61560 ETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAATPASAGHVWMSKQQAPPPPP 61381
Query: 337 ----------------------------------VSLSATTSPVVDSKAQVKTEGSAPGG 362
+ ++ P + +KTE +P
Sbjct: 61380 QQPPQAPPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSEPGQSQRTHIKTEQLSP-S 61204
Query: 363 HYTDQP--STSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSS-QASGLYSA 419
HY++Q S QIAY+ +LPHY ++P I+R Q+DY DHQ S YYSH++ Q +GLYS
Sbjct: 61203 HYSEQQQHSPQQIAYSPFNLPHYSPSYPPITRSQYDYTDHQNSSSYYSHAAGQGTGLYST 61024
Query: 420 FSYMGPSQRPLYTAISDPA--PSVPQSHSPTHWEQPVYTTLSRP 461
F+YM P+QRP+YT I+D + PS+PQ+HSP HWEQPVYT L+RP
Sbjct: 61023 FTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP 60892
Score = 174 bits (442), Expect = 1e-41
Identities = 84/124 (67%), Positives = 100/124 (79%), Gaps = 10/124 (8%)
Frame = -3
Query: 24 SPGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVCIREAVSQV 73
+P P+M+ D++ SG+G + + Q+++ E+++DKFPVCIREAVSQV
Sbjct: 63824 APSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQV 63645
Query: 74 LSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 133
L GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG
Sbjct: 63644 LKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 63465
Query: 134 KLWR 137
KLWR
Sbjct: 63464 KLWR 63453
Score = 82.8 bits (203), Expect = 6e-14
Identities = 48/93 (51%), Positives = 55/93 (58%), Gaps = 1/93 (1%)
Frame = -2
Query: 137 RLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXXXXXXXXXSI 196
RLLNES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K S
Sbjct: 62559 RLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK---NGQAEAEEATEQTHISP 62389
Query: 197 QAHYKNAHLDHRHPGEGSPMSDGH-PEHSSGQS 228
A +K D H G MS+ H P SG+S
Sbjct: 62388 NAIFKALQADSPHSSSG--MSEVHSPGEHSGES 62296
>gb|S74506.1|S74504S3 SOX9 [human, fetal brain, Genomic, 1494 nt, segment 3 of 3]
Length = 1494
Score = 206 bits (524), Expect = 4e-51
Identities = 118/284 (41%), Positives = 153/284 (53%), Gaps = 46/284 (16%)
Frame = +2
Query: 224 SSGQSHGXXXXXXXXKTELQAGKADSKREGRSLGEGGK-PHIDFGNVDIGEISHEVMSNM 282
S+GQS G KT++Q GKAD KREGR L EGG+ P IDF +VDIGE+S +V+SN+
Sbjct: 14 STGQSQGPPTPPTTPKTDVQPGKADLKREGRPLPEGGRQPPIDFRDVDIGELSSDVISNI 193
Query: 283 ETFDVNEFDQYLPPNXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHG----- 336
ETFDVNEFDQYLPPN W+SKQ
Sbjct: 194 ETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAATPASAGHVWMSKQQAPPPPP 373
Query: 337 ----------------------------------VSLSATTSPVVDSKAQVKTEGSAPGG 362
+ ++ P + +KTE +P
Sbjct: 374 QQPPQAPPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSEPGQSQRTHIKTEQLSP-S 550
Query: 363 HYTDQP--STSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSS-QASGLYSA 419
HY++Q S QIAY+ +LPHY ++P I+R Q+DY DHQ S YYSH++ Q +GLYS
Sbjct: 551 HYSEQQQHSPQQIAYSPFNLPHYSPSYPPITRSQYDYTDHQNSSSYYSHAAGQGTGLYST 730
Query: 420 FSYMGPSQRPLYTAISDPA--PSVPQSHSPTHWEQPVYTTLSRP 461
F+YM P+QRP+YT I+D + PS+PQ+HSP HWEQPVYT L+RP
Sbjct: 731 FTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP 862
>gb|BC004064.1|BC004064 Mus musculus, clone IMAGE:3590584, mRNA, partial cds
Length = 1267
Score = 198 bits (504), Expect = 8e-49
Identities = 112/263 (42%), Positives = 144/263 (54%), Gaps = 44/263 (16%)
Frame = +1
Query: 243 QAGKADSKREGRSLGEGGK-PHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXX-X 300
QAGK D KREGR L EGG+ P IDF +VDIGE+S +V+SN+ETFDVNEFDQYLPPN
Sbjct: 1 QAGKVDLKREGRPLAEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPG 180
Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHG------------------------ 336
W+SKQ
Sbjct: 181 VPATHGQVTYTGSYGISSTAPTPATAGHVWMSKQQAPPPPPQQPPQAPQAPQAPPQQQAP 360
Query: 337 -------------VSLSATTSPVVDSKAQVKTEGSAPGGHYTDQP--STSQIAYTSLSLP 381
+ ++ P + +KTE +P HY++Q S QI+Y+ +LP
Sbjct: 361 PQQPQAPQQQQAHTLTTLSSEPGQSQRTHIKTEQLSP-SHYSEQQQHSPQQISYSPFNLP 537
Query: 382 HYGSAFPSISRPQFDYPDHQPSGPYYSHSS-QASGLYSAFSYMGPSQRPLYTAISDPA-- 438
HY ++P I+R Q+DY DHQ SG YYSH++ Q SGLYS F+YM P+QRP+YT I+D +
Sbjct: 538 HYSPSYPPITRSQYDYADHQNSGSYYSHAAGQGSGLYSTFTYMNPAQRPMYTPIADTSGV 717
Query: 439 PSVPQSHSPTHWEQPVYTTLSRP 461
PS+PQ+HSP HWEQPVYT L+RP
Sbjct: 718 PSIPQTHSPQHWEQPVYTQLTRP 786
>gb|AF329945.1|AF329945 Takifugu rubripes SUN-like 1 (SUNL1), chromosome 17 open reading frame
27 (C17orf27), transcription factor SOX9 (SOX9), and
somatostatin receptor 2 (SSTR2) genes, complete cds; and
ubiquitin-specific-protease-3-like protein (USP3L) gene,
partial cds
Length = 194498
Score = 192 bits (487), Expect = 7e-47
Identities = 118/260 (45%), Positives = 148/260 (56%), Gaps = 23/260 (8%)
Frame = +1
Query: 225 SGQSHGXXXXXXXXKTELQAGKADSKREGRSLGEGGKP--HIDFGNVDIGEISHEVMSNM 282
SGQS G KT+L + KAD KREGR + EG +IDFG VDIGE+S EV+SNM
Sbjct: 90355 SGQSQGPPTPPTTPKTDLVSSKADLKREGRPMQEGTSRQLNIDFGAVDIGELSSEVISNM 90534
Query: 283 ETFDVNEFDQYLPPNXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXWISKQHGV--- 337
+FDV+EFDQYLPP+ W+SKQ
Sbjct: 90535 GSFDVDEFDQYLPPHSHAGVSGAPQAGYTGSYGISSSSVSQAAGVGAQAWMSKQQQQQQQ 90714
Query: 338 ----SLSATTSPVVDSK------AQVKTEGSAPGGHYTDQPSTSQIAYTSLSLPHYG-SA 386
SL+A + S+ AQ+KTE +P + Q S + Y S +L HY S+
Sbjct: 90715 QQQHSLTALSGGGEQSQQGQQRPAQIKTEQLSPSHYSEQQGSPQHVTYGSFNLQHYSTSS 90894
Query: 387 FPSISRPQFDYPDHQ-PSGPYYSHSS-QASGLYSAFSYMGPSQRPLYTAISDPA--PSVP 442
+PS++R Q+DY DHQ + YYSH++ Q SGLYS FSYM PSQRP+YT I+D A PSVP
Sbjct: 90895 YPSMTRAQYDYSDHQGGANSYYSHAAGQGSGLYSTFSYMNPSQRPMYTPIADNAGVPSVP 91074
Query: 443 QSHSPTHWE-QPVYTTLSRP 461
Q+HSP HWE QP+YT LSRP
Sbjct: 91075 QTHSPQHWEQQPIYTQLSRP 91134
Score = 173 bits (438), Expect = 3e-41
Identities = 86/138 (62%), Positives = 101/138 (72%), Gaps = 9/138 (6%)
Frame = +1
Query: 18 EDHHCLSPGPSMASDNSSHLASSGNGEMGKVKKEQQD---------SEADDDKFPVCIRE 68
E H +P PSM+ D++ SG+G + + + E +++KFPVCIR+
Sbjct: 89128 EKCHSDAPSPSMSEDSAGSPCPSGSGSDTENTRPSDNHLLLGPDYKKENEEEKFPVCIRD 89307
Query: 69 AVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAEL 128
AVSQVL GYDWTLVPMPVRVNGSNK+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAEL
Sbjct: 89308 AVSQVLKGYDWTLVPMPVRVNGSNKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAEL 89487
Query: 129 SKTLGKLWRLLNESDKRP 146
SKTLGKLWR + + P
Sbjct: 89488 SKTLGKLWR*VRSAVTHP 89541
Score = 77.0 bits (188), Expect = 3e-12
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = +2
Query: 137 RLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
RLLNE +KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 89780 RLLNEVEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK 89899
>dbj|AK024491.1|AK024491 Homo sapiens mRNA for FLJ00094 protein, partial cds
Length = 4149
Score = 178 bits (451), Expect = 1e-42
Identities = 130/345 (37%), Positives = 165/345 (47%), Gaps = 21/345 (6%)
Frame = +3
Query: 138 LLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKXXXXXXXXXXXXXXXXXXSIQ 197
LL+ES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 1644 LLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKAGHSDSDSGAELG-------- 1799
Query: 198 AHYKNAHLDHRHPGEG------SPMSDGHPE-HSSGQSHGXXXXXXXXKTELQ--AGKAD 248
HPG G + + DGH +GQ+HG KTELQ K +
Sbjct: 1800 ----------PHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTPKTELQQAGAKPE 1949
Query: 249 SKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNXXXXXXXXXXX 308
K EGR + G+ +IDF NVDI E+S EVM M+ FDV+EFDQYLP
Sbjct: 1950 LKLEGRRPVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQYLP---------LGGP 2102
Query: 309 XXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSATTSPVVDSKAQVKTEGSAPGGHYTDQP 368
W K S SA+ + + +KTE +P GHY DQP
Sbjct: 2103 APPEPGQAYGGAYFHAGVSPVWAHKS-APSASASPTETGPPRPHIKTEQPSP-GHYGDQP 2276
Query: 369 STSQIAYTSLSLPHYG------SAFPS-----ISRPQFDYPDHQPSGPYYSHSSQASGLY 417
S P YG SA P+ + Q DY D Q S Y ++ A GLY
Sbjct: 2277 RGS---------PDYGSCSGQSSATPAAPAGPFAGSQGDYGDLQASSYYGAYPGYAPGLY 2429
Query: 418 SAFSYMGPSQRPLYTAISDPAPSVPQSHSPT-HWEQPVYTTLSRP 461
+ P +RP + + + ++P +HSPT HW+QPVYTTL+RP
Sbjct: 2430 QYPCFHSP-RRPYASPLLN-GLALPPAHSPTSHWDQPVYTTLTRP 2558
Score = 147 bits (370), Expect = 3e-33
Identities = 69/85 (81%), Positives = 76/85 (89%), Gaps = 2/85 (2%)
Frame = +3
Query: 55 SEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSN--KSKPHVKRPMNAFMVWAQAA 112
+EA D++FP CIR+AVS+VL GYDW+LVPMPVR G K+KPHVKRPMNAFMVWAQAA
Sbjct: 6 AEAADERFPACIRDAVSRVLKGYDWSLVPMPVRGGGGGALKAKPHVKRPMNAFMVWAQAA 185
Query: 113 RRKLADQYPHLHNAELSKTLGKLWR 137
RRKLADQYPHLHNAELSKTLGKLWR
Sbjct: 186 RRKLADQYPHLHNAELSKTLGKLWR 260
>gb|S74504.1|S74504S1 SOX9 [human, fetal brain, Genomic, 979 nt, segment 1 of 3]
Length = 979
Score = 174 bits (442), Expect = 1e-41
Identities = 84/124 (67%), Positives = 100/124 (79%), Gaps = 10/124 (8%)
Frame = +1
Query: 24 SPGPSMASDNSSHLASSGNGEMGKVKKEQQDS----------EADDDKFPVCIREAVSQV 73
+P P+M+ D++ SG+G + + Q+++ E+++DKFPVCIREAVSQV
Sbjct: 589 APSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQV 768
Query: 74 LSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 133
L GYDWTLVPMPVRVNGS+K+KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG
Sbjct: 769 LKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLG 948
Query: 134 KLWR 137
KLWR
Sbjct: 949 KLWR 960
>emb|AJ251580.1|DME251580 Drosophila melanogaster mRNA for Sox100B protein (Sox100B gene)
Length = 1968
Score = 152 bits (385), Expect = 5e-35
Identities = 74/127 (58%), Positives = 96/127 (75%), Gaps = 1/127 (0%)
Frame = +1
Query: 48 VKKEQQDSEADDD-KFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFM 106
+K EQ++++ K I AV +VL GYDW LV + S++ K H+KRPMNAFM
Sbjct: 184 LKAEQKEAQGQGGRKEDERITTAVMKVLEGYDWNLVQASAKAP-SDRKKEHIKRPMNAFM 360
Query: 107 VWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYK 166
VWAQAARR ++ QYPHL N+ELSK+LGKLW+ L +SDK+PF+E AE+LRM HK++HPDYK
Sbjct: 361 VWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQEHPDYK 540
Query: 167 YQPRRRK 173
YQPRR+K
Sbjct: 541 YQPRRKK 561
>gb|AF191325.1|AF191325 Mus musculus SRY-related protein SOX 8 (Sox8) gene, partial cds
Length = 4519
Score = 152 bits (384), Expect = 6e-35
Identities = 80/136 (58%), Positives = 94/136 (68%), Gaps = 4/136 (2%)
Frame = +3
Query: 6 DLSEVEMSPVGSEDHHCLSPGPSMASDNSSHLASSGNGEMGKVKK--EQQDSEADDDKFP 63
D+SE P S S SD+ + + +G+ +G+ +EA D++FP
Sbjct: 1167 DMSEARAQPPCSPSGTASSMSHVEDSDSDAPPSPAGSEGLGRAGGGGRGDTAEAADERFP 1346
Query: 64 VCIREAVSQVLSGYDWTLVPMPVRVNGSN--KSKPHVKRPMNAFMVWAQAARRKLADQYP 121
CIR+AVSQVL GYDW+LVPMPVR G K+KPHVKRPMNAFMVWAQAARRKLADQYP
Sbjct: 1347 ACIRDAVSQVLKGYDWSLVPMPVRGGGGGTLKAKPHVKRPMNAFMVWAQAARRKLADQYP 1526
Query: 122 HLHNAELSKTLGKLWR 137
HLHNAELSKTLGKLWR
Sbjct: 1527 HLHNAELSKTLGKLWR 1574
Score = 123 bits (308), Expect = 4e-26
Identities = 89/255 (34%), Positives = 120/255 (46%), Gaps = 17/255 (6%)
Frame = +3
Query: 224 SSGQSHGXXXXXXXXKTELQAGKADSKRE----GRSLGEGGKPHIDFGNVDIGEISHEVM 279
SSGQ+HG KT+L SK+E GR L + G+ +IDF NVDI E+S EV+
Sbjct: 3588 SSGQTHGPPTPPTTPKTDLHQASNGSKQELRLEGRRLVDSGRQNIDFSNVDISELSSEVI 3767
Query: 280 SNMETFDVNEFDQYLPPNXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQH 335
SNM+TFDV+EFDQYLP N W K
Sbjct: 3768 SNMDTFDVHEFDQYLPLNGHSALPTEPSQATASGSYGGASYSHSGATGIGASPVWAHK-G 3944
Query: 336 GVSLSATTSPVVDSKAQVKTEGSAPGGHYTDQPS--------TSQIAYTSLSLPHYGSAF 387
S SA+ + + Q+KTE +P HY DQ S A S++ +A
Sbjct: 3945 APSASASPTEAGPLRPQIKTEQLSP-SHYNDQSHGSPGRADYGSYSAQASVTTAASATAA 4121
Query: 388 PSISRPQFDYPDHQPSGPYYSHSSQASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSP 447
S + Q DY D Q S Y + LY + Y S+RP + + + S+P +HSP
Sbjct: 4122 SSFASAQCDYTDLQASNYYSPYPGYPPSLYQ-YPYFHSSRRPYASPLLN-GLSMPPAHSP 4295
Query: 448 -THWEQPVYTTLSRP 461
++W+QPVYTTL+RP
Sbjct: 4296 SSNWDQPVYTTLTRP 4340
Score = 75.5 bits (184), Expect = 1e-11
Identities = 33/39 (84%), Positives = 38/39 (96%)
Frame = +2
Query: 138 LLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
LL+ES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 2624 LLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK 2740
>ref|XM_081225.1| Sox100B, mRNA
Length = 1945
Score = 152 bits (383), Expect = 8e-35
Identities = 72/125 (57%), Positives = 94/125 (74%)
Frame = +2
Query: 49 KKEQQDSEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVW 108
K + Q +D++ I AV +VL GYDW LV + +++ K H+KRPMNAFMVW
Sbjct: 179 KAQGQGGRKEDER----ITTAVMKVLEGYDWNLVQASAKAP-TDRKKEHIKRPMNAFMVW 343
Query: 109 AQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQ 168
AQAARR ++ QYPHL N+ELSK+LGKLW+ L +SDK+PF+E AE+LRM HK++HPDYKYQ
Sbjct: 344 AQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHKQEHPDYKYQ 523
Query: 169 PRRRK 173
PRR+K
Sbjct: 524 PRRKK 538
>gb|AE006465.1|AE006465 Homo sapiens 16p13.3 sequence section 4 of 8
Length = 278911
Score = 151 bits (382), Expect = 1e-34
Identities = 80/139 (57%), Positives = 94/139 (67%), Gaps = 7/139 (5%)
Frame = +3
Query: 6 DLSEVEMSPVGSEDHHCLSPGPSMASDNSSHLASSGNGEMGKVK-----KEQQDSEADDD 60
D+SE P S S SD+ + + +G+ +G+ +EA D+
Sbjct: 197124 DMSEARSQPPCSPSGTASSMSHVEDSDSDAPPSPAGSEGLGRAGVAVGGARGDPAEAADE 197303
Query: 61 KFPVCIREAVSQVLSGYDWTLVPMPVRVNGSN--KSKPHVKRPMNAFMVWAQAARRKLAD 118
+FP CIR+AVSQVL GYDW+LVPMPVR G K+KPHVKRPMNAFMVWAQAARRKLAD
Sbjct: 197304 RFPACIRDAVSQVLKGYDWSLVPMPVRGGGGGALKAKPHVKRPMNAFMVWAQAARRKLAD 197483
Query: 119 QYPHLHNAELSKTLGKLWR 137
QYPHLHNAELSKTLGKLWR
Sbjct: 197484 QYPHLHNAELSKTLGKLWR 197540
Score = 117 bits (293), Expect = 2e-24
Identities = 91/252 (36%), Positives = 118/252 (46%), Gaps = 14/252 (5%)
Frame = +2
Query: 224 SSGQSHGXXXXXXXXKTELQ--AGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSN 281
S GQ+HG KTELQ K + K EGR + G+ +IDF NVDI E+S EVM
Sbjct: 199889 SPGQTHGPPTPPTTPKTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGT 200068
Query: 282 METFDVNEFDQYLPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSA 341
M+ FDV+EFDQYLP W K S SA
Sbjct: 200069 MDAFDVHEFDQYLP---------LGGPAPPEPGQAYGGAYFHAGASPVWAHKS-APSASA 200218
Query: 342 TTSPVVDSKAQVKTEGSAPGGHYTDQPSTSQIAYTSLSLPHYG------SAFPS-----I 390
+ + + +KTE +P GHY DQP S P YG SA P+
Sbjct: 200219 SPTETGPPRPHIKTEQPSP-GHYGDQPRGS---------PDYGSCSGQSSATPAAPAGPF 200368
Query: 391 SRPQFDYPDHQPSGPYYSHSSQASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPT-H 449
+ Q DY D Q S Y ++ A GLY + P +RP + + + ++P +HSPT H
Sbjct: 200369 AGSQGDYGDLQASSYYGAYPGYAPGLYQYPCFHSP-RRPYASPLLN-GLALPPAHSPTSH 200542
Query: 450 WEQPVYTTLSRP 461
W+QPVYTTL+RP
Sbjct: 200543 WDQPVYTTLTRP 200578
Score = 76.6 bits (187), Expect = 4e-12
Identities = 33/39 (84%), Positives = 38/39 (96%)
Frame = +3
Query: 138 LLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
LL+ES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 198924 LLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAK 199040
>emb|Z99757.12|HS349H11 Human DNA sequence from clone LA16-394H11 on chromosome 16 Contains a
novel gene similar to SOX (SRY (sex determining region
Y), an STS, GSSs and CpG Islands, complete sequence [Homo
sapiens]
Length = 32506
Score = 151 bits (382), Expect = 1e-34
Identities = 80/139 (57%), Positives = 94/139 (67%), Gaps = 7/139 (5%)
Frame = +1
Query: 6 DLSEVEMSPVGSEDHHCLSPGPSMASDNSSHLASSGNGEMGKVK-----KEQQDSEADDD 60
D+SE P S S SD+ + + +G+ +G+ +EA D+
Sbjct: 5011 DMSEARSQPPCSPSGTASSMSHVEDSDSDAPPSPAGSEGLGRAGVAVGGARGDPAEAADE 5190
Query: 61 KFPVCIREAVSQVLSGYDWTLVPMPVRVNGSN--KSKPHVKRPMNAFMVWAQAARRKLAD 118
+FP CIR+AVSQVL GYDW+LVPMPVR G K+KPHVKRPMNAFMVWAQAARRKLAD
Sbjct: 5191 RFPACIRDAVSQVLKGYDWSLVPMPVRGGGGGALKAKPHVKRPMNAFMVWAQAARRKLAD 5370
Query: 119 QYPHLHNAELSKTLGKLWR 137
QYPHLHNAELSKTLGKLWR
Sbjct: 5371 QYPHLHNAELSKTLGKLWR 5427
Score = 117 bits (293), Expect = 2e-24
Identities = 91/252 (36%), Positives = 118/252 (46%), Gaps = 14/252 (5%)
Frame = +3
Query: 224 SSGQSHGXXXXXXXXKTELQ--AGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSN 281
S GQ+HG KTELQ K + K EGR + G+ +IDF NVDI E+S EVM
Sbjct: 7776 SPGQTHGPPTPPTTPKTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGT 7955
Query: 282 METFDVNEFDQYLPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWISKQHGVSLSA 341
M+ FDV+EFDQYLP W K S SA
Sbjct: 7956 MDAFDVHEFDQYLP---------LGGPAPPEPGQAYGGAYFHAGASPVWAHKS-APSASA 8105
Query: 342 TTSPVVDSKAQVKTEGSAPGGHYTDQPSTSQIAYTSLSLPHYG------SAFPS-----I 390
+ + + +KTE +P GHY DQP S P YG SA P+
Sbjct: 8106 SPTETGPPRPHIKTEQPSP-GHYGDQPRGS---------PDYGSCSGQSSATPAAPAGPF 8255
Query: 391 SRPQFDYPDHQPSGPYYSHSSQASGLYSAFSYMGPSQRPLYTAISDPAPSVPQSHSPT-H 449
+ Q DY D Q S Y ++ A GLY + P +RP + + + ++P +HSPT H
Sbjct: 8256 AGSQGDYGDLQASSYYGAYPGYAPGLYQYPCFHSP-RRPYASPLLN-GLALPPAHSPTSH 8429
Query: 450 WEQPVYTTLSRP 461
W+QPVYTTL+RP
Sbjct: 8430 WDQPVYTTLTRP 8465
Score = 76.6 bits (187), Expect = 4e-12
Identities = 33/39 (84%), Positives = 38/39 (96%)
Frame = +1
Query: 138 LLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
LL+ES+KRPF+EEAERLR+QHKKDHPDYKYQPRRRK+ K
Sbjct: 6811 LLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAK 6927
>ref|NM_011446.1| Mus musculus SRY-box containing gene 7 (Sox7), mRNA
Length = 3266
Score = 125 bits (315), Expect = 6e-27
Identities = 63/126 (50%), Positives = 83/126 (65%), Gaps = 16/126 (12%)
Frame = +3
Query: 67 REAVSQVLSGYDWT---------------LVPMPV-RVNGSNKSKPHVKRPMNAFMVWAQ 110
R A++ +L Y WT L P V R +G S+ ++RPMNAFMVWA+
Sbjct: 42 RSAMASLLGAYPWTEGLECPALEAELSDGLSPPAVPRPSGDKSSESRIRRPMNAFMVWAK 221
Query: 111 AARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPR 170
R++LA Q P LHNAELSK LGK W+ L S KRP+++EAERLR+QH +D+P+YKY+PR
Sbjct: 222 DERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPR 401
Query: 171 RRKNGK 176
R+K GK
Sbjct: 402 RKKQGK 419
>dbj|AB023419.1|AB023419 Mus musculus mRNA for mSox7, complete cds
Length = 3266
Score = 125 bits (315), Expect = 6e-27
Identities = 63/126 (50%), Positives = 83/126 (65%), Gaps = 16/126 (12%)
Frame = +3
Query: 67 REAVSQVLSGYDWT---------------LVPMPV-RVNGSNKSKPHVKRPMNAFMVWAQ 110
R A++ +L Y WT L P V R +G S+ ++RPMNAFMVWA+
Sbjct: 42 RSAMASLLGAYPWTEGLECPALEAELSDGLSPPAVPRPSGDKSSESRIRRPMNAFMVWAK 221
Query: 111 AARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPR 170
R++LA Q P LHNAELSK LGK W+ L S KRP+++EAERLR+QH +D+P+YKY+PR
Sbjct: 222 DERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPR 401
Query: 171 RRKNGK 176
R+K GK
Sbjct: 402 RKKQGK 419
>dbj|AB063098.1|AB063098 Macaca fascicularis brain cDNA clone:QtrA-14282, full insert
sequence
Length = 2051
Score = 125 bits (313), Expect = 1e-26
Identities = 60/129 (46%), Positives = 84/129 (64%), Gaps = 2/129 (1%)
Frame = +1
Query: 46 GKVKKEQQDSEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKP--HVKRPMN 103
G+ + QD +AD P E + +P P + SKP H+KRPMN
Sbjct: 361 GERRTPAQDGQADGQPSPGSSAEPFA----------LPTPTHLAAGTMSKPSDHIKRPMN 510
Query: 104 AFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHP 163
AFMVW++ RRK+A + P +HN+E+SK LG W+LL+E++KRP+I+EA+RLR QH K+HP
Sbjct: 511 AFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHP 690
Query: 164 DYKYQPRRR 172
DYKY+PRR+
Sbjct: 691 DYKYRPRRK 717
>dbj|AK004781.1|AK004781 Mus musculus adult male lung cDNA, RIKEN full-length enriched
library, clone:1200015E04:SRY-box containing gene 17,
full insert sequence
Length = 3132
Score = 125 bits (313), Expect = 1e-26
Identities = 56/92 (60%), Positives = 72/92 (77%)
Frame = +2
Query: 85 PVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDK 144
P +G K++ ++RPMNAFMVWA+ R++LA Q P LHNAELSK LGK W+ L ++K
Sbjct: 1247 PAGTSGRAKAESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEK 1426
Query: 145 RPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
RPF+EEAERLR+QH +DHP+YKY+PRRRK K
Sbjct: 1427 RPFVEEAERLRVQHMQDHPNYKYRPRRRKQVK 1522
>ref|NM_011441.1| Mus musculus SRY-box containing gene 17 (Sox17), mRNA
Length = 1512
Score = 125 bits (313), Expect = 1e-26
Identities = 56/92 (60%), Positives = 72/92 (77%)
Frame = +1
Query: 85 PVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDK 144
P +G K++ ++RPMNAFMVWA+ R++LA Q P LHNAELSK LGK W+ L ++K
Sbjct: 412 PAGTSGRAKAESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEK 591
Query: 145 RPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
RPF+EEAERLR+QH +DHP+YKY+PRRRK K
Sbjct: 592 RPFVEEAERLRVQHMQDHPNYKYRPRRRKQVK 687
>dbj|D49474.1|D49474 Mus musculus mRNA for HMG-box transcription factor, complete cds
Length = 1512
Score = 125 bits (313), Expect = 1e-26
Identities = 56/92 (60%), Positives = 72/92 (77%)
Frame = +1
Query: 85 PVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDK 144
P +G K++ ++RPMNAFMVWA+ R++LA Q P LHNAELSK LGK W+ L ++K
Sbjct: 412 PAGTSGRAKAESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEK 591
Query: 145 RPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
RPF+EEAERLR+QH +DHP+YKY+PRRRK K
Sbjct: 592 RPFVEEAERLRVQHMQDHPNYKYRPRRRKQVK 687
>gb|AF168614.2|AF168614 Danio rerio HMG-box transcription factor Sox17 mRNA, complete cds
Length = 1543
Score = 125 bits (313), Expect = 1e-26
Identities = 56/87 (64%), Positives = 70/87 (80%)
Frame = +2
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G KS+P ++RPMNAFMVWA+ R++LA Q P LHNAELSK LGK W+ L DKRPF+E
Sbjct: 293 GRGKSEPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPMVDKRPFVE 472
Query: 150 EAERLRMQHKKDHPDYKYQPRRRKNGK 176
EAERLR++H +DHP+YKY+P+RRK K
Sbjct: 473 EAERLRVKHMQDHPNYKYRPKRRKQVK 553
>dbj|AB052691.1|AB052691 Xenopus laevis mRNA for xSox17alpha2, complete cds
Length = 1581
Score = 124 bits (310), Expect = 2e-26
Identities = 55/88 (62%), Positives = 72/88 (81%)
Frame = +1
Query: 89 NGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFI 148
N +K++ ++RPMNAFMVWA+ R++LA Q P LHNAELSK LGK W+ L+ ++KRPF+
Sbjct: 229 NSRSKAEGRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLAEKRPFV 408
Query: 149 EEAERLRMQHKKDHPDYKYQPRRRKNGK 176
EEAERLR+QH +DHP+YKY+PRRRK K
Sbjct: 409 EEAERLRVQHMQDHPNYKYRPRRRKQVK 492
>emb|AJ001730.1|XLXSOX17A Xenopus laevis mRNA for Xsox17-alpha protein
Length = 1591
Score = 123 bits (309), Expect = 3e-26
Identities = 55/88 (62%), Positives = 71/88 (80%)
Frame = +3
Query: 89 NGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFI 148
N +K++ ++RPMNAFMVWA+ R++LA Q P LHNAELSK LGK W+ L ++KRPF+
Sbjct: 246 NSRSKAEARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLAEKRPFV 425
Query: 149 EEAERLRMQHKKDHPDYKYQPRRRKNGK 176
EEAERLR+QH +DHP+YKY+PRRRK K
Sbjct: 426 EEAERLRVQHMQDHPNYKYRPRRRKQVK 509
>gb|AF193437.1|AF193437 Mus musculus HMG box transcription factor (Sox14) gene, complete
cds
Length = 1518
Score = 123 bits (309), Expect = 3e-26
Identities = 53/91 (58%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
Frame = +2
Query: 83 PMPVRVNGS-NKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNE 141
P P R+ G+ +K H+KRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL+E
Sbjct: 356 PAPARLAGTMSKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSE 535
Query: 142 SDKRPFIEEAERLRMQHKKDHPDYKYQPRRR 172
++KRP+I+EA+RLR QH K+HPDYKY+PRR+
Sbjct: 536 AEKRPYIDEAKRLRAQHMKEHPDYKYRPRRK 628
>dbj|AB052690.1|AB052690 Xenopus laevis mRNA for xSox17alpha1, partial cds
Length = 1408
Score = 123 bits (309), Expect = 3e-26
Identities = 55/88 (62%), Positives = 71/88 (80%)
Frame = +1
Query: 89 NGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFI 148
N +K++ ++RPMNAFMVWA+ R++LA Q P LHNAELSK LGK W+ L ++KRPF+
Sbjct: 76 NSRSKAEARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLAEKRPFV 255
Query: 149 EEAERLRMQHKKDHPDYKYQPRRRKNGK 176
EEAERLR+QH +DHP+YKY+PRRRK K
Sbjct: 256 EEAERLRVQHMQDHPNYKYRPRRRKQVK 339
>dbj|AB073988.1|AB073988 Homo sapiens mRNA for SRY-related HMG-box transcription factor
SOX17, complete cds
Length = 1657
Score = 123 bits (309), Expect = 3e-26
Identities = 56/92 (60%), Positives = 70/92 (75%)
Frame = +1
Query: 85 PVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDK 144
P G K + ++RPMNAFMVWA+ R++LA Q P LHNAELSK LGK W+ L ++K
Sbjct: 166 PAGAAGRAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEK 345
Query: 145 RPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
RPF+EEAERLR+QH +DHP+YKY+PRRRK K
Sbjct: 346 RPFVEEAERLRVQHMQDHPNYKYRPRRRKQVK 441
>ref|NM_022454.1| Homo sapiens SRY (sex determining region Y)-box 17 (SOX17), mRNA
Length = 1853
Score = 123 bits (309), Expect = 3e-26
Identities = 56/92 (60%), Positives = 70/92 (75%)
Frame = +1
Query: 85 PVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDK 144
P G K + ++RPMNAFMVWA+ R++LA Q P LHNAELSK LGK W+ L ++K
Sbjct: 367 PAGAAGRAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEK 546
Query: 145 RPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
RPF+EEAERLR+QH +DHP+YKY+PRRRK K
Sbjct: 547 RPFVEEAERLRVQHMQDHPNYKYRPRRRKQVK 642
>dbj|AK025905.1|AK025905 Homo sapiens cDNA: FLJ22252 fis, clone HRC02734
Length = 1853
Score = 123 bits (309), Expect = 3e-26
Identities = 56/92 (60%), Positives = 70/92 (75%)
Frame = +1
Query: 85 PVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDK 144
P G K + ++RPMNAFMVWA+ R++LA Q P LHNAELSK LGK W+ L ++K
Sbjct: 367 PAGAAGRAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEK 546
Query: 145 RPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
RPF+EEAERLR+QH +DHP+YKY+PRRRK K
Sbjct: 547 RPFVEEAERLRVQHMQDHPNYKYRPRRRKQVK 642
>gb|AF107043.1|AF107043 Homo sapiens clone pCL11 DNA-binding protein SOX14 (SOX14) gene,
complete cds
Length = 6718
Score = 123 bits (308), Expect = 4e-26
Identities = 53/93 (56%), Positives = 73/93 (77%), Gaps = 2/93 (2%)
Frame = +1
Query: 82 VPMPVRVNGSNKSKP--HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLL 139
+P P + SKP H+KRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL
Sbjct: 4954 LPTPTHLAAGTMSKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLL 5133
Query: 140 NESDKRPFIEEAERLRMQHKKDHPDYKYQPRRR 172
+E++KRP+I+EA+RLR QH K+HPDYKY+PRR+
Sbjct: 5134 SEAEKRPYIDEAKRLRAQHMKEHPDYKYRPRRK 5232
>emb|AJ006230.1|HSA6230 Homo sapiens sox-14 gene
Length = 2063
Score = 123 bits (308), Expect = 4e-26
Identities = 53/93 (56%), Positives = 73/93 (77%), Gaps = 2/93 (2%)
Frame = +1
Query: 82 VPMPVRVNGSNKSKP--HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLL 139
+P P + SKP H+KRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL
Sbjct: 688 LPTPTHLAAGTMSKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLL 867
Query: 140 NESDKRPFIEEAERLRMQHKKDHPDYKYQPRRR 172
+E++KRP+I+EA+RLR QH K+HPDYKY+PRR+
Sbjct: 868 SEAEKRPYIDEAKRLRAQHMKEHPDYKYRPRRK 966
>gb|AF193436.1|AF193436 Homo sapiens HMG box transcription factor (SOX14) gene, complete
cds
Length = 818
Score = 123 bits (308), Expect = 4e-26
Identities = 53/93 (56%), Positives = 73/93 (77%), Gaps = 2/93 (2%)
Frame = +1
Query: 82 VPMPVRVNGSNKSKP--HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLL 139
+P P + SKP H+KRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL
Sbjct: 16 LPTPTHLAAGTMSKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLL 195
Query: 140 NESDKRPFIEEAERLRMQHKKDHPDYKYQPRRR 172
+E++KRP+I+EA+RLR QH K+HPDYKY+PRR+
Sbjct: 196 SEAEKRPYIDEAKRLRAQHMKEHPDYKYRPRRK 294
>gb|AC007159.4|AC007159 Homo sapiens, clone 2_A_4, complete sequence
Length = 155021
Score = 123 bits (308), Expect = 4e-26
Identities = 53/93 (56%), Positives = 73/93 (77%), Gaps = 2/93 (2%)
Frame = +1
Query: 82 VPMPVRVNGSNKSKP--HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLL 139
+P P + SKP H+KRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL
Sbjct: 73162 LPTPTHLAAGTMSKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLL 73341
Query: 140 NESDKRPFIEEAERLRMQHKKDHPDYKYQPRRR 172
+E++KRP+I+EA+RLR QH K+HPDYKY+PRR+
Sbjct: 73342 SEAEKRPYIDEAKRLRAQHMKEHPDYKYRPRRK 73440
>emb|AL137061.12|AL137061 Human DNA sequence from clone RP11-477B16 on chromosome 13, complete
sequence [Homo sapiens]
Length = 180538
Score = 122 bits (307), Expect = 5e-26
Identities = 55/85 (64%), Positives = 70/85 (81%), Gaps = 2/85 (2%)
Frame = -3
Query: 90 GSNKSKP--HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPF 147
G + SKP HVKRPMNAFMVW++A RRK+A + P +HN+E+SK LG W+LL ES+KRPF
Sbjct: 75509 GESMSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPF 75330
Query: 148 IEEAERLRMQHKKDHPDYKYQPRRR 172
I+EA+RLR H K+HPDYKY+PRR+
Sbjct: 75329 IDEAKRLRAMHMKEHPDYKYRPRRK 75255
>gb|AF107044.1|AF107044 Homo sapiens clone pCL4 DNA-binding protein SOX21 (SOX21) gene,
complete cds
Length = 8372
Score = 122 bits (307), Expect = 5e-26
Identities = 55/85 (64%), Positives = 70/85 (81%), Gaps = 2/85 (2%)
Frame = +3
Query: 90 GSNKSKP--HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPF 147
G + SKP HVKRPMNAFMVW++A RRK+A + P +HN+E+SK LG W+LL ES+KRPF
Sbjct: 1158 GESMSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPF 1337
Query: 148 IEEAERLRMQHKKDHPDYKYQPRRR 172
I+EA+RLR H K+HPDYKY+PRR+
Sbjct: 1338 IDEAKRLRAMHMKEHPDYKYRPRRK 1412
>gb|AY069926.1| Mus musculus HMG-box protein (Sox21) mRNA, complete cds
Length = 1725
Score = 121 bits (304), Expect = 1e-25
Identities = 54/86 (62%), Positives = 70/86 (80%), Gaps = 2/86 (2%)
Frame = +2
Query: 89 NGSNKSKP--HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRP 146
+G + SKP HVKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL ES+KRP
Sbjct: 203 HGDSMSKPVDHVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRP 382
Query: 147 FIEEAERLRMQHKKDHPDYKYQPRRR 172
FI+EA+RLR H K+HPDYKY+PRR+
Sbjct: 383 FIDEAKRLRAMHMKEHPDYKYRPRRK 460
>gb|AF302936.1|AF302936 Gallus gallus transcription factor SOX18 (SOX18) mRNA, complete cds
Length = 1593
Score = 121 bits (304), Expect = 1e-25
Identities = 57/101 (56%), Positives = 73/101 (71%)
Frame = +1
Query: 76 GYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKL 135
GY ++ P R G ++RPMNAFMVWA+ R++LA Q P LHNA LSK LG+
Sbjct: 463 GYGYS--PPAGRAEGKAGEDSRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQS 636
Query: 136 WRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
W+ L+ SDKRPF+EEAERLR+QH +DHP+YKY+PRR+K K
Sbjct: 637 WKALSASDKRPFVEEAERLRIQHLQDHPNYKYRPRRKKQAK 759
>ref|NM_007084.1| Homo sapiens SRY (sex determining region Y)-box 21 (SOX21), mRNA
Length = 831
Score = 120 bits (301), Expect = 3e-25
Identities = 54/81 (66%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = +1
Query: 94 SKP--HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEA 151
SKP HVKRPMNAFMVW++A RRK+A + P +HN+E+SK LG W+LL ES+KRPFI+EA
Sbjct: 4 SKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEA 183
Query: 152 ERLRMQHKKDHPDYKYQPRRR 172
+RLR H K+HPDYKY+PRR+
Sbjct: 184 KRLRAMHMKEHPDYKYRPRRK 246
>dbj|D86075.1|XELDNABPA Xenopus laevis mRNA for DNA-binding protein, complete cds
Length = 1254
Score = 120 bits (301), Expect = 3e-25
Identities = 58/130 (44%), Positives = 84/130 (64%)
Frame = +2
Query: 44 EMGKVKKEQQDSEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMN 103
+M + + ++ ++ +F C VS S DW + H+KRPMN
Sbjct: 77 DMDSSQHTEPSTDTEEGEFMAC--SPVSLDESDPDWC-----------KTATGHIKRPMN 217
Query: 104 AFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHP 163
AFMVW++ RRK+ +Q P +HNAE+SK LGK W++LN+S+K PFIEEAERLR++H D+P
Sbjct: 218 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIEEAERLRLKHMADYP 397
Query: 164 DYKYQPRRRK 173
DYKY+PR++K
Sbjct: 398 DYKYRPRKKK 427
>emb|AJ001742.1|XLXSOX17B Xenopus laevis mRNA for Xsox17-beta protein
Length = 1405
Score = 120 bits (301), Expect = 3e-25
Identities = 62/119 (52%), Positives = 82/119 (68%), Gaps = 11/119 (9%)
Frame = +3
Query: 69 AVSQVLSGYDWTLVPM-------PVRVNGS----NKSKPHVKRPMNAFMVWAQAARRKLA 117
+V ++ Y WT P+ P R GS +K++ ++RPMNAFMVWA+ R++LA
Sbjct: 144 SVPMMMGQYQWT-EPLTVFQDLKPKRDEGSADSRSKAEGRIRRPMNAFMVWAKDERKRLA 320
Query: 118 DQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
Q P LHNAELSK LGK W+ L + KRPF+EEAERLR+QH +D+PDYKY+PRR+K K
Sbjct: 321 QQNPDLHNAELSKMLGKSWKSLTLATKRPFVEEAERLRVQHIQDYPDYKYRPRRKKQVK 497
>dbj|D86076.1|XELDNABPB Xenopus laevis mRNA for DNA-binding protein, complete cds
Length = 1575
Score = 120 bits (301), Expect = 3e-25
Identities = 69/184 (37%), Positives = 96/184 (51%), Gaps = 1/184 (0%)
Frame = +2
Query: 44 EMGKVKKEQQDSEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMN 103
+M + + ++ ++ +F C VS S DW + H+KRPMN
Sbjct: 107 DMDSSQHTEPSTDTEEGEFMAC--SPVSLDESDPDWC-----------KTATGHIKRPMN 247
Query: 104 AFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHP 163
AFMVW++ RRK+ +Q P +HNAE+SK LGK W++LN+S+K PFIEEAERLR++H D+P
Sbjct: 248 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIEEAERLRLKHMADYP 427
Query: 164 DYKYQPRRR-KNGKXXXXXXXXXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSPMSDGHPE 222
DYKY+PR++ K S A K L H G GS E
Sbjct: 428 DYKYRPRKKPKVDPSASSKPPALTQSPEKSPKSRSAGRKCPKLKPSHSGSGSKSLSIKSE 607
Query: 223 HSSG 226
+S G
Sbjct: 608 YSGG 619
>dbj|AB026623.1|AB026623 Gallus gallus gene for SOX21, complete cds
Length = 2217
Score = 119 bits (299), Expect = 5e-25
Identities = 53/81 (65%), Positives = 69/81 (84%), Gaps = 2/81 (2%)
Frame = +3
Query: 94 SKP--HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEA 151
SKP HVKRPMNAFMVW++A RRK+A + P +HN+E+SK LG W+LL+E++KRPFI+EA
Sbjct: 996 SKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEA 1175
Query: 152 ERLRMQHKKDHPDYKYQPRRR 172
+RLR H K+HPDYKY+PRR+
Sbjct: 1176 KRLRAMHMKEHPDYKYRPRRK 1238
>gb|AF157388.1|AF157388 Strongylocentrotus purpuratus transcription factor SoxB2 (SoxB2)
mRNA, complete cds
Length = 1595
Score = 119 bits (298), Expect = 6e-25
Identities = 52/80 (65%), Positives = 65/80 (81%)
Frame = +3
Query: 93 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAE 152
K HVKRPMNAFMVW++ RRKLA + P +HN+E+SK LG W+LL+E DKRPFI+EA+
Sbjct: 189 KGTDHVKRPMNAFMVWSRGQRRKLAQENPKMHNSEISKRLGAEWKLLSEDDKRPFIDEAK 368
Query: 153 RLRMQHKKDHPDYKYQPRRR 172
RLR H K+HPDYKY+PRR+
Sbjct: 369 RLRALHMKEHPDYKYRPRRK 428
>ref|XM_009617.3| Homo sapiens SRY (sex determining region Y)-box 22 (SOX22), mRNA
Length = 3130
Score = 119 bits (298), Expect = 6e-25
Identities = 49/79 (62%), Positives = 66/79 (83%)
Frame = +1
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW+Q RRK+ DQ+P +HNAE+SK LG+ W+LL +S+K PF+ EAERLR+
Sbjct: 445 HIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRL 624
Query: 157 QHKKDHPDYKYQPRRRKNG 175
+H D+PDYKY+PR++ G
Sbjct: 625 KHMADYPDYKYRPRKKSKG 681
>ref|NM_006943.1| Homo sapiens SRY (sex determining region Y)-box 22 (SOX22), mRNA
Length = 3131
Score = 119 bits (298), Expect = 6e-25
Identities = 49/79 (62%), Positives = 66/79 (83%)
Frame = +3
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW+Q RRK+ DQ+P +HNAE+SK LG+ W+LL +S+K PF+ EAERLR+
Sbjct: 444 HIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRL 623
Query: 157 QHKKDHPDYKYQPRRRKNG 175
+H D+PDYKY+PR++ G
Sbjct: 624 KHMADYPDYKYRPRKKSKG 680
>gb|U35612.1|HSU35612 Homo sapiens SOX22 protein (SOX22) mRNA, complete cds
Length = 3131
Score = 119 bits (298), Expect = 6e-25
Identities = 49/79 (62%), Positives = 66/79 (83%)
Frame = +3
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW+Q RRK+ DQ+P +HNAE+SK LG+ W+LL +S+K PF+ EAERLR+
Sbjct: 444 HIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRL 623
Query: 157 QHKKDHPDYKYQPRRRKNG 175
+H D+PDYKY+PR++ G
Sbjct: 624 KHMADYPDYKYRPRKKSKG 680
>emb|AL034548.25|HS1103G7 Human DNA sequence from clone RP5-1103G7 on chromosome 20p12.2-13.
Contains up to three novel genes, the gene for a novel
protein similar to mouse VMP, the gene for a novel protein
kinase domains containing protein similar to
phosphoprotein C8FW and ra>
Length = 153170
Score = 119 bits (298), Expect = 6e-25
Identities = 49/79 (62%), Positives = 66/79 (83%)
Frame = +2
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW+Q RRK+ DQ+P +HNAE+SK LG+ W+LL +S+K PF+ EAERLR+
Sbjct: 80717 HIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRL 80896
Query: 157 QHKKDHPDYKYQPRRRKNG 175
+H D+PDYKY+PR++ G
Sbjct: 80897 KHMADYPDYKYRPRKKSKG 80953
>ref|NM_004189.1| Homo sapiens SRY (sex determining region Y)-box 14 (SOX14), mRNA
Length = 723
Score = 119 bits (297), Expect = 8e-25
Identities = 49/81 (60%), Positives = 68/81 (83%)
Frame = +1
Query: 92 NKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEA 151
+K H+KRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL+E++KRP+I+EA
Sbjct: 4 SKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEA 183
Query: 152 ERLRMQHKKDHPDYKYQPRRR 172
+RLR QH K+HPDYKY+PRR+
Sbjct: 184 KRLRAQHMKEHPDYKYRPRRK 246
>gb|AF193760.2|AF193760 Gallus gallus HMG box transcription factor SOX14 (SOX14) mRNA,
complete cds
Length = 957
Score = 119 bits (297), Expect = 8e-25
Identities = 49/81 (60%), Positives = 68/81 (83%)
Frame = +2
Query: 92 NKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEA 151
+K H+KRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL+E++KRP+I+EA
Sbjct: 107 SKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEA 286
Query: 152 ERLRMQHKKDHPDYKYQPRRR 172
+RLR QH K+HPDYKY+PRR+
Sbjct: 287 KRLRAQHMKEHPDYKYRPRRK 349
>ref|NM_003107.1| Homo sapiens SRY (sex determining region Y)-box 4 (SOX4), mRNA
Length = 2797
Score = 119 bits (297), Expect = 8e-25
Identities = 66/168 (39%), Positives = 85/168 (50%), Gaps = 1/168 (0%)
Frame = +3
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW+Q RRK+ +Q P +HNAE+SK LGK W+LL +SDK PFI EAERLR+
Sbjct: 522 HIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRL 701
Query: 157 QHKKDHPDYKYQPRRR-KNGKXXXXXXXXXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSP 215
+H D+PDYKY+PR++ K+G + H G G
Sbjct: 702 KHMADYPDYKYRPRKKVKSGNANSSSSAAASSKPGEKGDKVGGSGGGGH------GGGG- 860
Query: 216 MSDGHPEHSSGQSHGXXXXXXXXKTELQAGKADSKREGRSLGEGGKPH 263
G ++G G Q SK G + G KPH
Sbjct: 861 ---GGGSSNAGGGGGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPH 995
>emb|X70683.1|HSSOX4M H.sapiens mRNA for SOX-4 protein
Length = 2797
Score = 119 bits (297), Expect = 8e-25
Identities = 66/168 (39%), Positives = 85/168 (50%), Gaps = 1/168 (0%)
Frame = +3
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW+Q RRK+ +Q P +HNAE+SK LGK W+LL +SDK PFI EAERLR+
Sbjct: 522 HIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRL 701
Query: 157 QHKKDHPDYKYQPRRR-KNGKXXXXXXXXXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSP 215
+H D+PDYKY+PR++ K+G + H G G
Sbjct: 702 KHMADYPDYKYRPRKKVKSGNANSSSSAAASSKPGEKGDKVGGSGGGGH------GGGG- 860
Query: 216 MSDGHPEHSSGQSHGXXXXXXXXKTELQAGKADSKREGRSLGEGGKPH 263
G ++G G Q SK G + G KPH
Sbjct: 861 ---GGGSSNAGGGGGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPH 995
>dbj|AB026622.1|AB026622 Gallus gallus gene for SOX14, complete cds
Length = 2315
Score = 119 bits (297), Expect = 8e-25
Identities = 49/81 (60%), Positives = 68/81 (83%)
Frame = +1
Query: 92 NKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEA 151
+K H+KRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL+E++KRP+I+EA
Sbjct: 781 SKPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEA 960
Query: 152 ERLRMQHKKDHPDYKYQPRRR 172
+RLR QH K+HPDYKY+PRR+
Sbjct: 961 KRLRAQHMKEHPDYKYRPRRK 1023
>emb|AL136179.15|AL136179 Human DNA sequence from clone RP3-322L4 on chromosome 6. Contains the
SOX4 gene for SRY (sex determining region Y)-box 4, a
pseudogene similar to predicted fly, worm and yeast genes,
ESTs, STSs, GSSs and four CpG islands, complete sequence
[Homo sapien>
Length = 128728
Score = 119 bits (297), Expect = 8e-25
Identities = 66/168 (39%), Positives = 85/168 (50%), Gaps = 1/168 (0%)
Frame = +3
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW+Q RRK+ +Q P +HNAE+SK LGK W+LL +SDK PFI EAERLR+
Sbjct: 10404 HIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRL 10583
Query: 157 QHKKDHPDYKYQPRRR-KNGKXXXXXXXXXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSP 215
+H D+PDYKY+PR++ K+G + H G G
Sbjct: 10584 KHMADYPDYKYRPRKKVKSGNANSSSSAAASSKPGEKGDKVGGSGGGGH------GGGG- 10742
Query: 216 MSDGHPEHSSGQSHGXXXXXXXXKTELQAGKADSKREGRSLGEGGKPH 263
G ++G G Q SK G + G KPH
Sbjct: 10743 ---GGGSSNAGGGGGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPH 10877
>ref|NM_031439.1| Homo sapiens SRY (sex determining region Y)-box 7 (SOX7), mRNA
Length = 2089
Score = 118 bits (296), Expect = 1e-24
Identities = 54/94 (57%), Positives = 70/94 (74%)
Frame = +3
Query: 83 PMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNES 142
P R G S+ ++RPMNAFMVWA+ R++LA Q P LHNAELSK LGK W+ L S
Sbjct: 156 PAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLS 335
Query: 143 DKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
KRP+++EAERLR+QH +D+P+YKY+PRR+K K
Sbjct: 336 QKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAK 437
>gb|BC004299.1|BC004299 Homo sapiens, Similar to SRY-box containing gene 7, clone MGC:10895
IMAGE:3622936, mRNA, complete cds
Length = 2089
Score = 118 bits (296), Expect = 1e-24
Identities = 54/94 (57%), Positives = 70/94 (74%)
Frame = +3
Query: 83 PMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNES 142
P R G S+ ++RPMNAFMVWA+ R++LA Q P LHNAELSK LGK W+ L S
Sbjct: 156 PAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLS 335
Query: 143 DKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
KRP+++EAERLR+QH +D+P+YKY+PRR+K K
Sbjct: 336 QKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAK 437
>dbj|AK055556.1|AK055556 Homo sapiens cDNA FLJ30994 fis, clone HLUNG1000076, highly similar
to Mus musculus mRNA for mSox7
Length = 2247
Score = 118 bits (296), Expect = 1e-24
Identities = 54/94 (57%), Positives = 70/94 (74%)
Frame = +2
Query: 83 PMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNES 142
P R G S+ ++RPMNAFMVWA+ R++LA Q P LHNAELSK LGK W+ L S
Sbjct: 167 PAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLS 346
Query: 143 DKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
KRP+++EAERLR+QH +D+P+YKY+PRR+K K
Sbjct: 347 QKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAK 448
>ref|NM_009238.1| Mus musculus SRY-box containing gene 4 (Sox4), mRNA
Length = 2069
Score = 118 bits (296), Expect = 1e-24
Identities = 50/76 (65%), Positives = 65/76 (84%)
Frame = +3
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW+Q RRK+ +Q P +HNAE+SK LGK W+LL +SDK PFI+EAERLR+
Sbjct: 828 HIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIQEAERLRL 1007
Query: 157 QHKKDHPDYKYQPRRR 172
+H D+PDYKY+PR++
Sbjct: 1008KHMADYPDYKYRPRKK 1055
>emb|X70298.1|MMSOX4A M.musculus sox-4 mRNA
Length = 2069
Score = 118 bits (296), Expect = 1e-24
Identities = 50/76 (65%), Positives = 65/76 (84%)
Frame = +3
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW+Q RRK+ +Q P +HNAE+SK LGK W+LL +SDK PFI+EAERLR+
Sbjct: 828 HIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIQEAERLRL 1007
Query: 157 QHKKDHPDYKYQPRRR 172
+H D+PDYKY+PR++
Sbjct: 1008KHMADYPDYKYRPRKK 1055
>emb|AJ409320.1|HSA409320 Homo sapiens mRNA for SOX7 protein
Length = 1167
Score = 118 bits (296), Expect = 1e-24
Identities = 54/94 (57%), Positives = 70/94 (74%)
Frame = +1
Query: 83 PMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNES 142
P R G S+ ++RPMNAFMVWA+ R++LA Q P LHNAELSK LGK W+ L S
Sbjct: 88 PAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLS 267
Query: 143 DKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
KRP+++EAERLR+QH +D+P+YKY+PRR+K K
Sbjct: 268 QKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAK 369
>gb|BC006612.1|BC006612 Mus musculus, SRY-box containing gene 18, clone MGC:11476
IMAGE:3967084, mRNA, complete cds
Length = 1611
Score = 118 bits (295), Expect = 1e-24
Identities = 51/79 (64%), Positives = 66/79 (82%)
Frame = +3
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
++RPMNAFMVWA+ R++LA Q P LHNA LSK LGK W+ LN ++KRPF+EEAERLR+Q
Sbjct: 354 IRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNTAEKRPFVEEAERLRVQ 533
Query: 158 HKKDHPDYKYQPRRRKNGK 176
H +DHP+YKY+PRR+K +
Sbjct: 534 HLRDHPNYKYRPRRKKQAR 590
>emb|AJ243896.1|HSA243896 Homo sapiens mRNA for SOX18 protein
Length = 1616
Score = 118 bits (295), Expect = 1e-24
Identities = 51/79 (64%), Positives = 66/79 (82%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
++RPMNAFMVWA+ R++LA Q P LHNA LSK LGK W+ LN ++KRPF+EEAERLR+Q
Sbjct: 265 IRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNAAEKRPFVEEAERLRVQ 444
Query: 158 HKKDHPDYKYQPRRRKNGK 176
H +DHP+YKY+PRR+K +
Sbjct: 445 HLRDHPNYKYRPRRKKQAR 501
>dbj|D83650.1|D83650 Xenopus laevis mRNA for XLS13A protein, complete cds
Length = 1581
Score = 118 bits (295), Expect = 1e-24
Identities = 60/131 (45%), Positives = 78/131 (58%), Gaps = 1/131 (0%)
Frame = +2
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW++ RRK+ +Q P +HNAE+SK LGK W++LN+S+K PFI EAERLR+
Sbjct: 251 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRL 430
Query: 157 QHKKDHPDYKYQPRRR-KNGKXXXXXXXXXXXXXXXXXXSIQAHYKNAHLDHRHPGEGSP 215
+H D+PDYKY+PR++ K S A K L H G GS
Sbjct: 431 KHMADYPDYKYRPRKKPKVDPSASSKPPALTQSPEKSPKSRSAGRKCPKLKPSHSGSGSK 610
Query: 216 MSDGHPEHSSG 226
E+S G
Sbjct: 611 SLSIKSEYSGG 643
>gb|AF022928.1|AF022928 Xenopus laevis Sry-related HMG factor (Sox-2) mRNA, complete cds
Length = 977
Score = 118 bits (295), Expect = 1e-24
Identities = 52/85 (61%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Frame = +2
Query: 89 NGSNKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPF 147
N NK+ P VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL+E++KRPF
Sbjct: 116 NNQNKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPF 295
Query: 148 IEEAERLRMQHKKDHPDYKYQPRRR 172
I+EA+RLR H K+HPDYKY+PRR+
Sbjct: 296 IDEAKRLRALHMKEHPDYKYRPRRK 370
>ref|NM_018419.1| Homo sapiens SRY (sex determining region Y)-box 18 (SOX18), mRNA
Length = 1339
Score = 118 bits (295), Expect = 1e-24
Identities = 51/79 (64%), Positives = 66/79 (82%)
Frame = +2
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
++RPMNAFMVWA+ R++LA Q P LHNA LSK LGK W+ LN ++KRPF+EEAERLR+Q
Sbjct: 398 IRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNAAEKRPFVEEAERLRVQ 577
Query: 158 HKKDHPDYKYQPRRRKNGK 176
H +DHP+YKY+PRR+K +
Sbjct: 578 HLRDHPNYKYRPRRKKQAR 634
>dbj|AB033888.1|AB033888 Homo sapiens SOX18 mRNA, complete cds
Length = 1339
Score = 118 bits (295), Expect = 1e-24
Identities = 51/79 (64%), Positives = 66/79 (82%)
Frame = +2
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
++RPMNAFMVWA+ R++LA Q P LHNA LSK LGK W+ LN ++KRPF+EEAERLR+Q
Sbjct: 398 IRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNAAEKRPFVEEAERLRVQ 577
Query: 158 HKKDHPDYKYQPRRRKNGK 176
H +DHP+YKY+PRR+K +
Sbjct: 578 HLRDHPNYKYRPRRKKQAR 634
>gb|AF270652.1|AF270652 Homo sapiens Sry-related HMG-box protein (SOX18) mRNA, complete cds
Length = 1730
Score = 118 bits (295), Expect = 1e-24
Identities = 51/79 (64%), Positives = 66/79 (82%)
Frame = +3
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
++RPMNAFMVWA+ R++LA Q P LHNA LSK LGK W+ LN ++KRPF+EEAERLR+Q
Sbjct: 375 IRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNAAEKRPFVEEAERLRVQ 554
Query: 158 HKKDHPDYKYQPRRRKNGK 176
H +DHP+YKY+PRR+K +
Sbjct: 555 HLRDHPNYKYRPRRKKQAR 611
>gb|AF005476.1|AF005476 Xenopus laevis XlSOX-2 (Sox-2) mRNA, complete cds
Length = 1190
Score = 118 bits (295), Expect = 1e-24
Identities = 52/85 (61%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Frame = +2
Query: 89 NGSNKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPF 147
N NK+ P VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL+E++KRPF
Sbjct: 302 NNQNKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPF 481
Query: 148 IEEAERLRMQHKKDHPDYKYQPRRR 172
I+EA+RLR H K+HPDYKY+PRR+
Sbjct: 482 IDEAKRLRALHMKEHPDYKYRPRRK 556
>dbj|AB052693.1|AB052693 Xenopus laevis mRNA for xSox18beta, complete cds
Length = 2216
Score = 117 bits (294), Expect = 2e-24
Identities = 51/81 (62%), Positives = 66/81 (80%)
Frame = +1
Query: 96 PHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLR 155
P ++RPMNAFMVWA+ R++LA Q P LHNA LSK LG+ W+ L ++KRPF+EEAERLR
Sbjct: 313 PRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKNLTSAEKRPFVEEAERLR 492
Query: 156 MQHKKDHPDYKYQPRRRKNGK 176
+QH +DHP+YKY+PRR+K K
Sbjct: 493 VQHLQDHPNYKYRPRRKKQAK 555
>ref|NM_079015.1| Drosophila melanogaster Sox box protein 15 (Sox15), mRNA
Length = 3655
Score = 117 bits (294), Expect = 2e-24
Identities = 52/92 (56%), Positives = 67/92 (72%)
Frame = +1
Query: 85 PVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDK 144
P + + ++RPMNAFMVWA+ R+KLAD+ P LHNA+LSK LGK WR L D+
Sbjct: 1675 PGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDR 1854
Query: 145 RPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
RP++EEAERLR+ H +HP+YKY+PRRRK K
Sbjct: 1855 RPYVEEAERLRVIHMTEHPNYKYRPRRRKQSK 1950
>emb|AJ250955.1|DME250955 Drosophila melanogaster mRNA for Sox50E protein (Sox50E gene)
Length = 3655
Score = 117 bits (294), Expect = 2e-24
Identities = 52/92 (56%), Positives = 67/92 (72%)
Frame = +1
Query: 85 PVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDK 144
P + + ++RPMNAFMVWA+ R+KLAD+ P LHNA+LSK LGK WR L D+
Sbjct: 1675 PGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDR 1854
Query: 145 RPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
RP++EEAERLR+ H +HP+YKY+PRRRK K
Sbjct: 1855 RPYVEEAERLRVIHMTEHPNYKYRPRRRKQSK 1950
>emb|AJ009310.1|XLAJ9310 Xenopus laevis cDNA clone 30F5-2
Length = 1631
Score = 117 bits (294), Expect = 2e-24
Identities = 52/84 (61%), Positives = 67/84 (78%)
Frame = +3
Query: 89 NGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFI 148
N S + VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL++SDKRPFI
Sbjct: 183 NASTLDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSDKRPFI 362
Query: 149 EEAERLRMQHKKDHPDYKYQPRRR 172
+EA+RLR H KD+PDYKY+PRRR
Sbjct: 363 DEAKRLRAVHMKDYPDYKYRPRRR 434
>ref|XM_080594.1| Sox box protein 15, mRNA
Length = 3654
Score = 117 bits (294), Expect = 2e-24
Identities = 52/92 (56%), Positives = 67/92 (72%)
Frame = +2
Query: 85 PVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDK 144
P + + ++RPMNAFMVWA+ R+KLAD+ P LHNA+LSK LGK WR L D+
Sbjct: 1673 PGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDR 1852
Query: 145 RPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
RP++EEAERLR+ H +HP+YKY+PRRRK K
Sbjct: 1853 RPYVEEAERLRVIHMTEHPNYKYRPRRRKQSK 1948
>gb|U85091.1|DRU85091 Danio rerio transcriptional regulator Sox-11B (sox11B) mRNA,
complete cds
Length = 1748
Score = 117 bits (293), Expect = 2e-24
Identities = 49/90 (54%), Positives = 70/90 (77%)
Frame = +1
Query: 83 PMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNES 142
P+P + + + H+KRPMNAFMVW++ RRK+ +Q P +HNAE+SK LGK W++L +S
Sbjct: 133 PVPPKPDWCKTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDS 312
Query: 143 DKRPFIEEAERLRMQHKKDHPDYKYQPRRR 172
+K PFI EAERLR+QH D+PDYKY+P+++
Sbjct: 313 EKIPFIREAERLRLQHMADYPDYKYRPKKK 402
>emb|AJ237813.1|DRE237813 Danio rerio mRNA for Sox 11b protein
Length = 2666
Score = 117 bits (293), Expect = 2e-24
Identities = 49/90 (54%), Positives = 70/90 (77%)
Frame = +1
Query: 83 PMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNES 142
P+P + + + H+KRPMNAFMVW++ RRK+ +Q P +HNAE+SK LGK W++L +S
Sbjct: 115 PVPPKPDWCKTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDS 294
Query: 143 DKRPFIEEAERLRMQHKKDHPDYKYQPRRR 172
+K PFI EAERLR+QH D+PDYKY+P+++
Sbjct: 295 EKIPFIREAERLRLQHMADYPDYKYRPKKK 384
>gb|AF193435.1|AF193435 Mus musculus HMG box transcription factor (Sox14) mRNA, partial cds
Length = 989
Score = 117 bits (293), Expect = 2e-24
Identities = 48/76 (63%), Positives = 66/76 (86%)
Frame = +1
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL+E++KRP+I+EA+RLR
Sbjct: 4 HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA 183
Query: 157 QHKKDHPDYKYQPRRR 172
QH K+HPDYKY+PRR+
Sbjct: 184 QHMKEHPDYKYRPRRK 231
>ref|NM_009236.1| Mus musculus SRY-box containing gene 18 (Sox18), mRNA
Length = 1585
Score = 117 bits (293), Expect = 2e-24
Identities = 51/76 (67%), Positives = 65/76 (85%)
Frame = +2
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
++RPMNAFMVWA+ R++LA Q P LHNA LSK LGK W+ LN ++KRPF+EEAERLR+Q
Sbjct: 323 IRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNTAEKRPFVEEAERLRVQ 502
Query: 158 HKKDHPDYKYQPRRRK 173
H +DHP+YKY+PRR+K
Sbjct: 503 HLRDHPNYKYRPRRKK 550
>gb|L35032.1|MUSSOX18TF Mouse HMG-box transcription factor (sox18) mRNA, complete cds
Length = 1585
Score = 117 bits (293), Expect = 2e-24
Identities = 51/76 (67%), Positives = 65/76 (85%)
Frame = +2
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
++RPMNAFMVWA+ R++LA Q P LHNA LSK LGK W+ LN ++KRPF+EEAERLR+Q
Sbjct: 323 IRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNTAEKRPFVEEAERLRVQ 502
Query: 158 HKKDHPDYKYQPRRRK 173
H +DHP+YKY+PRR+K
Sbjct: 503 HLRDHPNYKYRPRRKK 550
>dbj|AB052692.1|AB052692 Xenopus laevis mRNA for xSox18alpha, complete cds
Length = 2147
Score = 116 bits (291), Expect = 4e-24
Identities = 51/81 (62%), Positives = 65/81 (79%)
Frame = +1
Query: 96 PHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLR 155
P ++RPMNAFMVWA+ R++LA Q P LHNA LSK LG+ W+ L +KRPF+EEAERLR
Sbjct: 262 PRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKNLTSVEKRPFVEEAERLR 441
Query: 156 MQHKKDHPDYKYQPRRRKNGK 176
+QH +DHP+YKY+PRR+K K
Sbjct: 442 VQHLQDHPNYKYRPRRKKQAK 504
>emb|Y07542.1|XLSOX3PRT X.laevis mRNA for SOX3 protein
Length = 1691
Score = 116 bits (291), Expect = 4e-24
Identities = 51/84 (60%), Positives = 67/84 (79%)
Frame = +1
Query: 89 NGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFI 148
N S + VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL++SDKRPFI
Sbjct: 175 NASTLDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSDKRPFI 354
Query: 149 EEAERLRMQHKKDHPDYKYQPRRR 172
+EA+RLR H KD+PDYKY+PRR+
Sbjct: 355 DEAKRLRAVHMKDYPDYKYRPRRK 426
>dbj|D87209.1|D87209 Xenopus laevis mRNA for XLS13B protein, complete cds
Length = 2637
Score = 116 bits (291), Expect = 4e-24
Identities = 54/122 (44%), Positives = 80/122 (65%)
Frame = +3
Query: 51 EQQDSEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQ 110
+ + + ++ +F C A+ + S DW + H+KRPMNAFMVW++
Sbjct: 135 QHTEPDTEEGEFMACSPAALDE--SDPDWC-----------KTATGHIKRPMNAFMVWSK 275
Query: 111 AARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPR 170
RRK+ +Q P +HNAE+SK LGK W++LN+S+K PFI EAERLR++H D+PDYKY+PR
Sbjct: 276 IERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKHMADYPDYKYRPR 455
Query: 171 RR 172
++
Sbjct: 456 KK 461
>gb|U12532.1|GGU12532 Gallus gallus Sox2 transcription factor (Sox2) mRNA, complete cds
Length = 1355
Score = 116 bits (290), Expect = 5e-24
Identities = 50/84 (59%), Positives = 66/84 (78%)
Frame = +1
Query: 89 NGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFI 148
N S VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL+E++KRPFI
Sbjct: 346 NNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFI 525
Query: 149 EEAERLRMQHKKDHPDYKYQPRRR 172
+EA+RLR H K+HPDYKY+PRR+
Sbjct: 526 DEAKRLRALHMKEHPDYKYRPRRK 597
>emb|X96997.1|OASOX2GEN O.aries SOX-2 gene
Length = 3054
Score = 116 bits (290), Expect = 5e-24
Identities = 51/84 (60%), Positives = 69/84 (81%), Gaps = 1/84 (1%)
Frame = +1
Query: 90 GSNKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFI 148
G+ K+ P VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL+E++KRPFI
Sbjct: 364 GNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFI 543
Query: 149 EEAERLRMQHKKDHPDYKYQPRRR 172
+EA+RLR H K+HPDYKY+PRR+
Sbjct: 544 DEAKRLRALHMKEHPDYKYRPRRK 615
>emb|AJ324649.1|HSA324649 Homo sapiens genomic sequence surrounding NotI site, clone
NR5-FN13R
Length = 749
Score = 116 bits (290), Expect = 5e-24
Identities = 51/84 (60%), Positives = 69/84 (81%), Gaps = 1/84 (1%)
Frame = +3
Query: 90 GSNKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFI 148
G+ K+ P VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL+E++KRPFI
Sbjct: 132 GNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFI 311
Query: 149 EEAERLRMQHKKDHPDYKYQPRRR 172
+EA+RLR H K+HPDYKY+PRR+
Sbjct: 312 DEAKRLRALHMKEHPDYKYRPRRK 383
>gb|BC013923.1|BC013923 Homo sapiens, Similar to SRY-box containing gene 2, clone MGC:2413
IMAGE:2823424, mRNA, complete cds
Length = 1181
Score = 116 bits (290), Expect = 5e-24
Identities = 51/84 (60%), Positives = 69/84 (81%), Gaps = 1/84 (1%)
Frame = +1
Query: 90 GSNKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFI 148
G+ K+ P VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL+E++KRPFI
Sbjct: 178 GNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFI 357
Query: 149 EEAERLRMQHKKDHPDYKYQPRRR 172
+EA+RLR H K+HPDYKY+PRR+
Sbjct: 358 DEAKRLRALHMKEHPDYKYRPRRK 429
>gb|U31967.1|MMU31967 Mus musculus high mobility group box protein (sox2) mRNA, complete
cds
Length = 2283
Score = 116 bits (290), Expect = 5e-24
Identities = 51/84 (60%), Positives = 69/84 (81%), Gaps = 1/84 (1%)
Frame = +2
Query: 90 GSNKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFI 148
G+ K+ P VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL+E++KRPFI
Sbjct: 461 GNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFI 640
Query: 149 EEAERLRMQHKKDHPDYKYQPRRR 172
+EA+RLR H K+HPDYKY+PRR+
Sbjct: 641 DEAKRLRALHMKEHPDYKYRPRRK 712
>gb|L07335.1|HUMHMGBOX Homo sapiens (clone 6AR33) HMG box mRNA, 3' end cds
Length = 1109
Score = 116 bits (290), Expect = 5e-24
Identities = 51/84 (60%), Positives = 69/84 (81%), Gaps = 1/84 (1%)
Frame = +1
Query: 90 GSNKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFI 148
G+ K+ P VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL+E++KRPFI
Sbjct: 124 GNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFI 303
Query: 149 EEAERLRMQHKKDHPDYKYQPRRR 172
+EA+RLR H K+HPDYKY+PRR+
Sbjct: 304 DEAKRLRALHMKEHPDYKYRPRRK 375
>ref|NM_011443.1| Mus musculus SRY-box containing gene 2 (Sox2), mRNA
Length = 960
Score = 116 bits (290), Expect = 5e-24
Identities = 51/84 (60%), Positives = 69/84 (81%), Gaps = 1/84 (1%)
Frame = +1
Query: 90 GSNKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFI 148
G+ K+ P VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL+E++KRPFI
Sbjct: 100 GNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFI 279
Query: 149 EEAERLRMQHKKDHPDYKYQPRRR 172
+EA+RLR H K+HPDYKY+PRR+
Sbjct: 280 DEAKRLRALHMKEHPDYKYRPRRK 351
>emb|X94127.1|MMSOX2 M.musculus SOX2 gene
Length = 2418
Score = 116 bits (290), Expect = 5e-24
Identities = 51/84 (60%), Positives = 69/84 (81%), Gaps = 1/84 (1%)
Frame = +2
Query: 90 GSNKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFI 148
G+ K+ P VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL+E++KRPFI
Sbjct: 506 GNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFI 685
Query: 149 EEAERLRMQHKKDHPDYKYQPRRR 172
+EA+RLR H K+HPDYKY+PRR+
Sbjct: 686 DEAKRLRALHMKEHPDYKYRPRRK 757
>dbj|D50603.1|CHKSOX2 Chicken mRNA for SOX-2, complete cds
Length = 1186
Score = 116 bits (290), Expect = 5e-24
Identities = 50/84 (59%), Positives = 66/84 (78%)
Frame = +2
Query: 89 NGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFI 148
N S VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL+E++KRPFI
Sbjct: 152 NNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFI 331
Query: 149 EEAERLRMQHKKDHPDYKYQPRRR 172
+EA+RLR H K+HPDYKY+PRR+
Sbjct: 332 DEAKRLRALHMKEHPDYKYRPRRK 403
>dbj|AB010741.1|AB010741 Oncorhynchus mykiss mRNA for rtSox24, complete cds
Length = 2298
Score = 116 bits (290), Expect = 5e-24
Identities = 51/93 (54%), Positives = 71/93 (75%), Gaps = 3/93 (3%)
Frame = +3
Query: 83 PMP---VRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLL 139
P+P V+ + + H+KRPMNAFMVW++ RRK+ +Q P +HNAE+SK LGK W+LL
Sbjct: 255 PVPLKSVKADWCKTATGHIKRPMNAFMVWSKVERRKIMEQSPDMHNAEISKRLGKRWKLL 434
Query: 140 NESDKRPFIEEAERLRMQHKKDHPDYKYQPRRR 172
+S+K PFI EAERLR+QH D+PDYKY+P+++
Sbjct: 435 KDSEKIPFIREAERLRLQHMADYPDYKYRPKKK 533
>emb|AJ327010.1|HSA327010 Homo sapiens genomic sequence surrounding NotI site, clone NL1-ZD4R
Length = 832
Score = 116 bits (290), Expect = 5e-24
Identities = 51/84 (60%), Positives = 69/84 (81%), Gaps = 1/84 (1%)
Frame = +3
Query: 90 GSNKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFI 148
G+ K+ P VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL+E++KRPFI
Sbjct: 132 GNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFI 311
Query: 149 EEAERLRMQHKKDHPDYKYQPRRR 172
+EA+RLR H K+HPDYKY+PRR+
Sbjct: 312 DEAKRLRALHMKEHPDYKYRPRRK 383
>emb|Z31560.1|HSSOX2G H.sapiens sox-2 mRNA (partial)
Length = 1085
Score = 116 bits (290), Expect = 5e-24
Identities = 51/84 (60%), Positives = 69/84 (81%), Gaps = 1/84 (1%)
Frame = +1
Query: 90 GSNKSKP-HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFI 148
G+ K+ P VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL+E++KRPFI
Sbjct: 106 GNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFI 285
Query: 149 EEAERLRMQHKKDHPDYKYQPRRR 172
+EA+RLR H K+HPDYKY+PRR+
Sbjct: 286 DEAKRLRALHMKEHPDYKYRPRRK 357
>gb|AF101266.1|AF101266 Danio rerio DNA binding protein (sox25) mRNA, complete cds
Length = 1098
Score = 115 bits (289), Expect = 7e-24
Identities = 51/80 (63%), Positives = 66/80 (81%)
Frame = +3
Query: 93 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAE 152
K HVKRPMNAFMVW++A RRK+A P +HN+E+SK LG W+LL++S+KRPFI+EA+
Sbjct: 261 KPMDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDEAK 440
Query: 153 RLRMQHKKDHPDYKYQPRRR 172
RLR H K+HPDYKY+PRR+
Sbjct: 441 RLRAVHMKEHPDYKYRPRRK 500
>dbj|D83649.1|D83649 Xenopus laevis mRNA for xSox7 protein, complete cds
Length = 1980
Score = 115 bits (289), Expect = 7e-24
Identities = 58/120 (48%), Positives = 79/120 (65%), Gaps = 13/120 (10%)
Frame = +3
Query: 70 VSQVLSGYDWT----LVPM---------PVRVNGSNKSKPHVKRPMNAFMVWAQAARRKL 116
++ ++ Y WT PM P R S+ ++RPMNAFMVWA+ R++L
Sbjct: 66 MTTLMGSYSWTESLDCSPMDGDLSDGLSPHRSPREKGSETRIRRPMNAFMVWAKDERKRL 245
Query: 117 ADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK 176
A Q P LHNAELSK LGK W+ L+ + KRP++EEAERLR+QH +D+P+YKY+PRR+K K
Sbjct: 246 AVQNPDLHNAELSKMLGKSWKALSPAQKRPYVEEAERLRVQHMQDYPNYKYRPRRKKQIK 425
>gb|U85092.1|DRU85092 Danio rerio transcriptional regulator Sox-21 (sox21) mRNA, complete
cds
Length = 999
Score = 115 bits (289), Expect = 7e-24
Identities = 51/80 (63%), Positives = 66/80 (81%)
Frame = +2
Query: 93 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAE 152
K HVKRPMNAFMVW++A RRK+A P +HN+E+SK LG W+LL++S+KRPFI+EA+
Sbjct: 260 KPMDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDEAK 439
Query: 153 RLRMQHKKDHPDYKYQPRRR 172
RLR H K+HPDYKY+PRR+
Sbjct: 440 RLRAVHMKEHPDYKYRPRRK 499
>emb|Z18959.1|MMSOX10 M.musculus mRNA for Sox 10 (partial)
Length = 170
Score = 115 bits (289), Expect = 7e-24
Identities = 55/56 (98%), Positives = 55/56 (98%)
Frame = +2
Query: 106 MVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKD 161
MVWAQAA RKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKD
Sbjct: 2 MVWAQAAPRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKD 169
>emb|AJ237812.1|DRE237812 Danio rerio mRNA for Sox 11a protein, partial
Length = 3280
Score = 115 bits (288), Expect = 9e-24
Identities = 58/140 (41%), Positives = 84/140 (59%)
Frame = +3
Query: 33 NSSHLASSGNGEMGKVKKEQQDSEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSN 92
N + + + N E + +E DS D+ +F V I DW
Sbjct: 66 NGTMVQQTDNSETDSMSREATDS--DESEFMVSINP---------DWC-----------K 179
Query: 93 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAE 152
+ H+KRPMNAFMVW++ RRK+ +Q P +HNAE+SK LGK W++L +S+K PFI EAE
Sbjct: 180 TATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAE 359
Query: 153 RLRMQHKKDHPDYKYQPRRR 172
RLR++H D+PDYKY+P+++
Sbjct: 360 RLRLKHMADYPDYKYRPKKK 419
>gb|AY058313.1| Drosophila melanogaster GH07353 full length cDNA
Length = 2669
Score = 115 bits (288), Expect = 9e-24
Identities = 48/80 (60%), Positives = 65/80 (81%)
Frame = +2
Query: 93 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAE 152
+++ H+KRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LL E +KRPFI+EA+
Sbjct: 1040 QNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPFIDEAK 1219
Query: 153 RLRMQHKKDHPDYKYQPRRR 172
RLR H K+HPDYKY+PRR+
Sbjct: 1220 RLRAMHMKEHPDYKYRPRRK 1279
>gb|U85090.1|DRU85090 Danio rerio transcriptional regulator Sox-11A (sox11A) mRNA,
complete cds
Length = 2421
Score = 115 bits (288), Expect = 9e-24
Identities = 58/140 (41%), Positives = 84/140 (59%)
Frame = +1
Query: 33 NSSHLASSGNGEMGKVKKEQQDSEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSN 92
N + + + N E + +E DS D+ +F V I DW
Sbjct: 31 NGTMVQQTDNSETDSMSREATDS--DESEFMVSINP---------DWC-----------K 144
Query: 93 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAE 152
+ H+KRPMNAFMVW++ RRK+ +Q P +HNAE+SK LGK W++L +S+K PFI EAE
Sbjct: 145 TATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAE 324
Query: 153 RLRMQHKKDHPDYKYQPRRR 172
RLR++H D+PDYKY+P+++
Sbjct: 325 RLRLKHMADYPDYKYRPKKK 384
>emb|AJ245396.1|OLA245396 Oryzias latipes mRNA for SOX3 protein
Length = 1786
Score = 115 bits (287), Expect = 1e-23
Identities = 49/84 (58%), Positives = 66/84 (78%)
Frame = +3
Query: 89 NGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFI 148
N S + VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL +++KRPFI
Sbjct: 267 NNSANDQERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLTDAEKRPFI 446
Query: 149 EEAERLRMQHKKDHPDYKYQPRRR 172
+EA+RLR H K+HPDYKY+PRR+
Sbjct: 447 DEAKRLRAMHMKEHPDYKYRPRRK 518
>emb|AJ335474.1|HSA335474 Homo sapiens genomic sequence surrounding NotI site, clone
NR1-SD1RS
Length = 709
Score = 115 bits (287), Expect = 1e-23
Identities = 53/106 (50%), Positives = 75/106 (70%)
Frame = -3
Query: 67 REAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNA 126
R +V+SG+ + P N + H+KRPMNAFMVW++ RRK+ +Q P +HNA
Sbjct: 470 RPCPKRVISGF--SRGPCKNPPNWFKPASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNA 297
Query: 127 ELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRR 172
E+SK LGK W++L +S+K PFI EAERLR++H D+PDYKY+PR++
Sbjct: 296 EISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPRKK 159
>emb|Z18958.1|MMSOX9 M.musculus mRNA for Sox 9 (partial)
Length = 170
Score = 115 bits (287), Expect = 1e-23
Identities = 53/56 (94%), Positives = 56/56 (99%)
Frame = +2
Query: 106 MVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKD 161
MVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNES+KRPF+EEAERLR+QHKKD
Sbjct: 2 MVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKD 169
>gb|U70441.1|MMU70441 Mus musculus Sox10 (Sox10) mRNA, partial cds
Length = 163
Score = 115 bits (287), Expect = 1e-23
Identities = 54/54 (100%), Positives = 54/54 (100%)
Frame = +2
Query: 108 WAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKD 161
WAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKD
Sbjct: 2 WAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKD 163
>emb|AL591389.5| Zebrafish DNA sequence from clone XX-202L16 on chromosome 6, complete
sequence [Danio rerio]
Length = 93098
Score = 114 bits (285), Expect = 2e-23
Identities = 50/80 (62%), Positives = 65/80 (80%)
Frame = -3
Query: 93 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAE 152
K HVKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LL++S+KRPFI+EA+
Sbjct: 60936 KPMDHVKRPMNAFMVWSRVQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDEAK 60757
Query: 153 RLRMQHKKDHPDYKYQPRRR 172
RLR H K+HPDYKY+PRR+
Sbjct: 60756 RLRAVHMKEHPDYKYRPRRK 60697
>dbj|AB012237.1|AB012237 Gallus gallus mRNA for SOX11, complete cds
Length = 1509
Score = 114 bits (285), Expect = 2e-23
Identities = 59/135 (43%), Positives = 84/135 (61%)
Frame = +1
Query: 38 ASSGNGEMGKVKKEQQDSEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPH 97
A S E + +E D+E + +F C A+ + S DW + H
Sbjct: 223 AESAESE-SNLPREAMDTE--EGEFMACSPVALDE--SDPDWC-----------KTASGH 354
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
+KRPMNAFMVW++ RRK+ +Q P +HNAE+SK LGK W++L +S+K PFI EAERLR++
Sbjct: 355 IKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLK 534
Query: 158 HKKDHPDYKYQPRRR 172
H D+PDYKY+PR++
Sbjct: 535 HMADYPDYKYRPRKK 579
>gb|L12022.1|CDSCSDJ Chelydra serpentina sex determining sra-2 DNA
Length = 224
Score = 114 bits (285), Expect = 2e-23
Identities = 50/72 (69%), Positives = 61/72 (84%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+Q RRK+ DQ+P +HNAE+SK LGK W+LL +SDK PFI EAERLR++
Sbjct: 7 VKRPMNAFMVWSQNERRKIMDQWPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLK 186
Query: 158 HKKDHPDYKYQP 169
H D+PDYKY+P
Sbjct: 187 HMADYPDYKYRP 222
>gb|AF157389.3|AF157389 Strongylocentrotus purpuratus transcription factor SoxB1 (SoxB1)
mRNA, complete cds
Length = 1100
Score = 114 bits (285), Expect = 2e-23
Identities = 49/81 (60%), Positives = 65/81 (79%)
Frame = +2
Query: 92 NKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEA 151
N + VKRPMNAFMVW++ RRKL+ + P +HN+E+SK LG W+LL+E +KRPFI+EA
Sbjct: 197 NNNPDRVKRPMNAFMVWSRGQRRKLSQENPKMHNSEISKRLGAEWKLLSEDEKRPFIDEA 376
Query: 152 ERLRMQHKKDHPDYKYQPRRR 172
+RLR H K+HPDYKY+PRR+
Sbjct: 377 KRLRAVHMKEHPDYKYRPRRK 439
>gb|U12534.1|GGU12534 Gallus gallus Sox11 transcription factor (Sox11) mRNA, complete cds
Length = 1977
Score = 114 bits (285), Expect = 2e-23
Identities = 59/135 (43%), Positives = 84/135 (61%)
Frame = +1
Query: 38 ASSGNGEMGKVKKEQQDSEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPH 97
A S E + +E D+E + +F C A+ + S DW + H
Sbjct: 376 AESAESE-SNLPREAMDTE--EGEFMACSPVALDE--SDPDWC-----------KTASGH 507
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
+KRPMNAFMVW++ RRK+ +Q P +HNAE+SK LGK W++L +S+K PFI EAERLR++
Sbjct: 508 IKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLK 687
Query: 158 HKKDHPDYKYQPRRR 172
H D+PDYKY+PR++
Sbjct: 688 HMADYPDYKYRPRKK 732
>dbj|AB028641.1|AB028641 Homo sapiens mRNA for SOX11, complete cds
Length = 8743
Score = 114 bits (284), Expect = 3e-23
Identities = 47/76 (61%), Positives = 64/76 (83%)
Frame = +2
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW++ RRK+ +Q P +HNAE+SK LGK W++L +S+K PFI EAERLR+
Sbjct: 197 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRL 376
Query: 157 QHKKDHPDYKYQPRRR 172
+H D+PDYKY+PR++
Sbjct: 377 KHMADYPDYKYRPRKK 424
>ref|NM_003108.1| Homo sapiens SRY (sex determining region Y)-box 11 (SOX11), mRNA
Length = 1998
Score = 114 bits (284), Expect = 3e-23
Identities = 47/76 (61%), Positives = 64/76 (83%)
Frame = +1
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW++ RRK+ +Q P +HNAE+SK LGK W++L +S+K PFI EAERLR+
Sbjct: 217 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRL 396
Query: 157 QHKKDHPDYKYQPRRR 172
+H D+PDYKY+PR++
Sbjct: 397 KHMADYPDYKYRPRKK 444
>gb|U23752.1|HSU23752 Human SOX-11 mRNA, complete cds
Length = 1998
Score = 114 bits (284), Expect = 3e-23
Identities = 47/76 (61%), Positives = 64/76 (83%)
Frame = +1
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW++ RRK+ +Q P +HNAE+SK LGK W++L +S+K PFI EAERLR+
Sbjct: 217 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRL 396
Query: 157 QHKKDHPDYKYQPRRR 172
+H D+PDYKY+PR++
Sbjct: 397 KHMADYPDYKYRPRKK 444
>gb|AF186844.1|AF186844 Xenopus laevis transcription factor Sox4 (Sox4) mRNA, complete cds
Length = 1140
Score = 114 bits (284), Expect = 3e-23
Identities = 48/76 (63%), Positives = 62/76 (81%)
Frame = +1
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW+Q RRK+ +Q P +HNAE+SK LGK W+ L + DK PFI EAERLR+
Sbjct: 175 HIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKQLKDGDKIPFIREAERLRL 354
Query: 157 QHKKDHPDYKYQPRRR 172
+H D+PDYKY+PR++
Sbjct: 355 KHMADYPDYKYRPRKK 402
>ref|NM_005986.1| Homo sapiens SRY (sex determining region Y)-box 1 (SOX1), mRNA
Length = 1164
Score = 114 bits (284), Expect = 3e-23
Identities = 47/83 (56%), Positives = 68/83 (81%)
Frame = +1
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G+ ++ VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W++++E++KRPFI+
Sbjct: 127 GAKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFID 306
Query: 150 EAERLRMQHKKDHPDYKYQPRRR 172
EA+RLR H K+HPDYKY+PRR+
Sbjct: 307 EAKRLRALHMKEHPDYKYRPRRK 375
>emb|AL138691.15|AL138691 Human DNA sequence from clone RP11-310D8 on chromosome 13, complete
sequence [Homo sapiens]
Length = 147665
Score = 114 bits (284), Expect = 3e-23
Identities = 47/83 (56%), Positives = 68/83 (81%)
Frame = -2
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G+ ++ VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W++++E++KRPFI+
Sbjct: 15721 GAKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFID 15542
Query: 150 EAERLRMQHKKDHPDYKYQPRRR 172
EA+RLR H K+HPDYKY+PRR+
Sbjct: 15541 EAKRLRALHMKEHPDYKYRPRRK 15473
>ref|NM_053349.1| Rattus norvegicus SRY-box containing gene 11 (Sox11), mRNA
Length = 2036
Score = 114 bits (284), Expect = 3e-23
Identities = 47/76 (61%), Positives = 64/76 (83%)
Frame = +1
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW++ RRK+ +Q P +HNAE+SK LGK W++L +S+K PFI EAERLR+
Sbjct: 451 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRL 630
Query: 157 QHKKDHPDYKYQPRRR 172
+H D+PDYKY+PR++
Sbjct: 631 KHMADYPDYKYRPRKK 678
>emb|AJ004858.1|RNAJ4858 Rattus norvegicus mRNA for Sry-related HMG-box protein Sox11
Length = 2036
Score = 114 bits (284), Expect = 3e-23
Identities = 47/76 (61%), Positives = 64/76 (83%)
Frame = +1
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW++ RRK+ +Q P +HNAE+SK LGK W++L +S+K PFI EAERLR+
Sbjct: 451 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRL 630
Query: 157 QHKKDHPDYKYQPRRR 172
+H D+PDYKY+PR++
Sbjct: 631 KHMADYPDYKYRPRKK 678
>emb|Y13436.1|HSSOX1 Homo sapiens sox1 gene
Length = 4091
Score = 114 bits (284), Expect = 3e-23
Identities = 47/83 (56%), Positives = 68/83 (81%)
Frame = +1
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G+ ++ VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W++++E++KRPFI+
Sbjct: 187 GAKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFID 366
Query: 150 EAERLRMQHKKDHPDYKYQPRRR 172
EA+RLR H K+HPDYKY+PRR+
Sbjct: 367 EAKRLRALHMKEHPDYKYRPRRK 435
>emb|AJ336098.1|HSA336098 Homo sapiens genomic sequence surrounding NotI site, clone
NR3-BJ2RS
Length = 589
Score = 114 bits (284), Expect = 3e-23
Identities = 47/76 (61%), Positives = 64/76 (83%)
Frame = -3
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW++ RRK+ +Q P +HNAE+SK LGK W++L +S+K PFI EAERLR+
Sbjct: 386 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRL 207
Query: 157 QHKKDHPDYKYQPRRR 172
+H D+PDYKY+PR++
Sbjct: 206 KHMADYPDYKYRPRKK 159
>emb|X94126.1|MMSOX1 M.musculus SOX1 gene
Length = 2376
Score = 114 bits (284), Expect = 3e-23
Identities = 47/83 (56%), Positives = 68/83 (81%)
Frame = +1
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G+ ++ VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W++++E++KRPFI+
Sbjct: 562 GTKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFID 741
Query: 150 EAERLRMQHKKDHPDYKYQPRRR 172
EA+RLR H K+HPDYKY+PRR+
Sbjct: 742 EAKRLRALHMKEHPDYKYRPRRK 810
>ref|XM_027553.1| Homo sapiens SRY (sex determining region Y)-box 1 (SOX1), mRNA
Length = 1176
Score = 114 bits (284), Expect = 3e-23
Identities = 47/83 (56%), Positives = 68/83 (81%)
Frame = +1
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G+ ++ VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W++++E++KRPFI+
Sbjct: 127 GAKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFID 306
Query: 150 EAERLRMQHKKDHPDYKYQPRRR 172
EA+RLR H K+HPDYKY+PRR+
Sbjct: 307 EAKRLRALHMKEHPDYKYRPRRK 375
>ref|NM_009233.1| Mus musculus SRY-box containing gene 1 (Sox1), mRNA
Length = 1176
Score = 114 bits (284), Expect = 3e-23
Identities = 47/83 (56%), Positives = 68/83 (81%)
Frame = +1
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G+ ++ VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W++++E++KRPFI+
Sbjct: 127 GTKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFID 306
Query: 150 EAERLRMQHKKDHPDYKYQPRRR 172
EA+RLR H K+HPDYKY+PRR+
Sbjct: 307 EAKRLRALHMKEHPDYKYRPRRK 375
>gb|BC000985.2|BC000985 Homo sapiens, SRY (sex determining region Y)-box 20, clone MGC:5138
IMAGE:3447385, mRNA, complete cds
Length = 1314
Score = 113 bits (283), Expect = 3e-23
Identities = 48/75 (64%), Positives = 64/75 (85%)
Frame = +3
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+ A RR++A Q P +HN+E+SK LG W+LL+E +KRPF+EEA+RLR +
Sbjct: 543 VKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPFVEEAKRLRAR 722
Query: 158 HKKDHPDYKYQPRRR 172
H +D+PDYKY+PRR+
Sbjct: 723 HLRDYPDYKYRPRRK 767
>gb|AC005416.1|AC005416 Drosophila melanogaster DNA sequence (P1 DS00901 (D289)), complete
sequence
Length = 57336
Score = 113 bits (283), Expect = 3e-23
Identities = 51/85 (60%), Positives = 68/85 (80%), Gaps = 3/85 (3%)
Frame = -2
Query: 91 SNKSKPH---VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPF 147
+NK++ H VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+ L+ES+KRPF
Sbjct: 40010 ANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPF 39831
Query: 148 IEEAERLRMQHKKDHPDYKYQPRRR 172
I+EA+RLR H K+HPDYKY+PRR+
Sbjct: 39830 IDEAKRLRAVHMKEHPDYKYRPRRK 39756
>gb|AC093045.1| Drosophila melanogaster, chromosome 2L, region 29E-29E, BAC clone
BACR01O16, complete sequence
Length = 189904
Score = 113 bits (283), Expect = 3e-23
Identities = 51/85 (60%), Positives = 68/85 (80%), Gaps = 3/85 (3%)
Frame = +1
Query: 91 SNKSKPH---VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPF 147
+NK++ H VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+ L+ES+KRPF
Sbjct: 67774 ANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPF 67953
Query: 148 IEEAERLRMQHKKDHPDYKYQPRRR 172
I+EA+RLR H K+HPDYKY+PRR+
Sbjct: 67954 IDEAKRLRAVHMKEHPDYKYRPRRK 68028
>gb|AE003622.3|AE003622 Drosophila melanogaster genomic scaffold 142000013386055 section 15 of
63, complete sequence
Length = 262290
Score = 113 bits (283), Expect = 3e-23
Identities = 51/85 (60%), Positives = 68/85 (80%), Gaps = 3/85 (3%)
Frame = +3
Query: 91 SNKSKPH---VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPF 147
+NK++ H VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+ L+ES+KRPF
Sbjct: 157101 ANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPF 157280
Query: 148 IEEAERLRMQHKKDHPDYKYQPRRR 172
I+EA+RLR H K+HPDYKY+PRR+
Sbjct: 157281 IDEAKRLRAVHMKEHPDYKYRPRRK 157355
>dbj|AK027742.1|AK027742 Homo sapiens cDNA FLJ14836 fis, clone OVARC1001702
Length = 1788
Score = 113 bits (283), Expect = 3e-23
Identities = 48/75 (64%), Positives = 64/75 (85%)
Frame = -3
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+ A RR++A Q P +HN+E+SK LG W+LL+E +KRPF+EEA+RLR +
Sbjct: 1438 VKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPFVEEAKRLRAR 1259
Query: 158 HKKDHPDYKYQPRRR 172
H +D+PDYKY+PRR+
Sbjct: 1258 HLRDYPDYKYRPRRK 1214
>gb|AC007421.12|AC007421 Homo sapiens chromosome 17, clone hRPC.1030_O_14, complete sequence
Length = 95240
Score = 113 bits (283), Expect = 3e-23
Identities = 48/75 (64%), Positives = 64/75 (85%)
Frame = +2
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+ A RR++A Q P +HN+E+SK LG W+LL+E +KRPF+EEA+RLR +
Sbjct: 82640 VKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPFVEEAKRLRAR 82819
Query: 158 HKKDHPDYKYQPRRR 172
H +D+PDYKY+PRR+
Sbjct: 82820 HLRDYPDYKYRPRRK 82864
>ref|NM_079996.1| Drosophila melanogaster SoxNeuro (SoxN), mRNA
Length = 2298
Score = 113 bits (283), Expect = 3e-23
Identities = 51/85 (60%), Positives = 68/85 (80%), Gaps = 3/85 (3%)
Frame = +1
Query: 91 SNKSKPH---VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPF 147
+NK++ H VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+ L+ES+KRPF
Sbjct: 517 ANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPF 696
Query: 148 IEEAERLRMQHKKDHPDYKYQPRRR 172
I+EA+RLR H K+HPDYKY+PRR+
Sbjct: 697 IDEAKRLRAVHMKEHPDYKYRPRRK 771
>ref|XM_078951.1| SoxNeuro, mRNA
Length = 2901
Score = 113 bits (283), Expect = 3e-23
Identities = 51/85 (60%), Positives = 68/85 (80%), Gaps = 3/85 (3%)
Frame = +3
Query: 91 SNKSKPH---VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPF 147
+NK++ H VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+ L+ES+KRPF
Sbjct: 1233 ANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPF 1412
Query: 148 IEEAERLRMQHKKDHPDYKYQPRRR 172
I+EA+RLR H K+HPDYKY+PRR+
Sbjct: 1413 IDEAKRLRAVHMKEHPDYKYRPRRK 1487
>emb|AJ252124.1|DME252124 Drosophila melanogaster mRNA for SoxNeuro (SoxN gene)
Length = 2901
Score = 113 bits (283), Expect = 3e-23
Identities = 51/85 (60%), Positives = 68/85 (80%), Gaps = 3/85 (3%)
Frame = +3
Query: 91 SNKSKPH---VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPF 147
+NK++ H VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+ L+ES+KRPF
Sbjct: 1233 ANKNQQHADRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPF 1412
Query: 148 IEEAERLRMQHKKDHPDYKYQPRRR 172
I+EA+RLR H K+HPDYKY+PRR+
Sbjct: 1413 IDEAKRLRAVHMKEHPDYKYRPRRK 1487
>ref|NM_006942.1| Homo sapiens SRY (sex determining region Y)-box 20 (SOX20), mRNA
Length = 1394
Score = 113 bits (283), Expect = 3e-23
Identities = 48/75 (64%), Positives = 64/75 (85%)
Frame = +3
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+ A RR++A Q P +HN+E+SK LG W+LL+E +KRPF+EEA+RLR +
Sbjct: 639 VKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPFVEEAKRLRAR 818
Query: 158 HKKDHPDYKYQPRRR 172
H +D+PDYKY+PRR+
Sbjct: 819 HLRDYPDYKYRPRRK 863
>dbj|AB006867.1|AB006867 Homo sapiens mRNA for hSOX20 protein, complete cds
Length = 1394
Score = 113 bits (283), Expect = 3e-23
Identities = 48/75 (64%), Positives = 64/75 (85%)
Frame = +3
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+ A RR++A Q P +HN+E+SK LG W+LL+E +KRPF+EEA+RLR +
Sbjct: 639 VKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPFVEEAKRLRAR 818
Query: 158 HKKDHPDYKYQPRRR 172
H +D+PDYKY+PRR+
Sbjct: 819 HLRDYPDYKYRPRRK 863
>dbj|AB011802.1|AB011802 Gallus gallus mRNA for SOX1, complete cds
Length = 2312
Score = 113 bits (282), Expect = 4e-23
Identities = 47/83 (56%), Positives = 66/83 (78%)
Frame = +2
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G + VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W++++E++KRPFI+
Sbjct: 326 GGKAGQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFID 505
Query: 150 EAERLRMQHKKDHPDYKYQPRRR 172
EA+RLR H K+HPDYKY+PRR+
Sbjct: 506 EAKRLRALHMKEHPDYKYRPRRK 574
>ref|NM_078038.1| sex-determining protein SOX3 like
Length = 639
Score = 113 bits (282), Expect = 4e-23
Identities = 49/79 (62%), Positives = 63/79 (79%)
Frame = +1
Query: 94 SKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAER 153
S HVKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+ L+E +KRPFI+EA+R
Sbjct: 130 SLDHVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKQLSEQEKRPFIDEAKR 309
Query: 154 LRMQHKKDHPDYKYQPRRR 172
LR H K+HPDYKY+PRR+
Sbjct: 310 LRALHMKEHPDYKYRPRRK 366
>emb|Z18957.1|MMSOX8 M.musculus mRNA for Sox 8 (partial)
Length = 170
Score = 113 bits (282), Expect = 4e-23
Identities = 52/56 (92%), Positives = 56/56 (99%)
Frame = +2
Query: 106 MVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKD 161
MVWAQAARRKLADQYPHLHNAELSKTLGKLWRLL+ES+KRPF+EEAERLR+QHKKD
Sbjct: 2 MVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKD 169
>emb|X96419.1|DMSOXDOMN D.melanogaster mRNA for SOX-domain protein
Length = 1801
Score = 112 bits (281), Expect = 6e-23
Identities = 48/76 (63%), Positives = 63/76 (82%)
Frame = +2
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW++ RR++A P +HN+E+SK LG W+LL ES+KRPFI+EA+RLR
Sbjct: 482 HIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRA 661
Query: 157 QHKKDHPDYKYQPRRR 172
H K+HPDYKY+PRR+
Sbjct: 662 LHMKEHPDYKYRPRRK 709
>gb|AC069457.5| Drosophila melanogaster 3L BAC RP98-16J19 (Roswell Park Cancer
Institute Drosophila BAC Library) complete sequence
Length = 160366
Score = 112 bits (281), Expect = 6e-23
Identities = 48/76 (63%), Positives = 63/76 (82%)
Frame = -2
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW++ RR++A P +HN+E+SK LG W+LL ES+KRPFI+EA+RLR
Sbjct: 35307 HIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRA 35128
Query: 157 QHKKDHPDYKYQPRRR 172
H K+HPDYKY+PRR+
Sbjct: 35127 LHMKEHPDYKYRPRRK 35080
>gb|U68056.1|DMU68056 Drosophila melanogaster SOX HMG domain protein mRNA, complete cds
Length = 1914
Score = 112 bits (281), Expect = 6e-23
Identities = 48/76 (63%), Positives = 63/76 (82%)
Frame = +3
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW++ RR++A P +HN+E+SK LG W+LL ES+KRPFI+EA+RLR
Sbjct: 606 HIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRA 785
Query: 157 QHKKDHPDYKYQPRRR 172
H K+HPDYKY+PRR+
Sbjct: 786 LHMKEHPDYKYRPRRK 833
>gb|AE003535.2|AE003535 Drosophila melanogaster genomic scaffold 142000013386050 section 33 of
54, complete sequence
Length = 278708
Score = 112 bits (281), Expect = 6e-23
Identities = 48/76 (63%), Positives = 63/76 (82%)
Frame = -3
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW++ RR++A P +HN+E+SK LG W+LL ES+KRPFI+EA+RLR
Sbjct: 86703 HIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRA 86524
Query: 157 QHKKDHPDYKYQPRRR 172
H K+HPDYKY+PRR+
Sbjct: 86523 LHMKEHPDYKYRPRRK 86476
Score = 87.4 bits (215), Expect = 3e-15
Identities = 38/64 (59%), Positives = 49/64 (76%)
Frame = -3
Query: 92 NKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEA 151
+ S H+KRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LL E KRPFI+EA
Sbjct: 16518 HNSHDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEA 16339
Query: 152 ERLR 155
+RLR
Sbjct: 16338 KRLR 16327
Score = 62.8 bits (151), Expect = 7e-08
Identities = 25/48 (52%), Positives = 38/48 (79%)
Frame = -3
Query: 93 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLN 140
+++ H+KRPMNAFMVW++ RRK+A P +HN+E+SK LGK +++N
Sbjct: 34992 QNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGKFSKIVN 34849
Score = 38.1 bits (87), Expect(2) = 4e-05
Identities = 16/24 (66%), Positives = 20/24 (82%)
Frame = -1
Query: 132 LGKLWRLLNESDKRPFIEEAERLR 155
LG W+LL E +KRPFI+EA+RLR
Sbjct: 28487 LGAEWKLLTEEEKRPFIDEAKRLR 28416
Score = 34.7 bits (78), Expect(2) = 4e-05
Identities = 12/18 (66%), Positives = 15/18 (82%)
Frame = -2
Query: 155 RMQHKKDHPDYKYQPRRR 172
R H K+HPDYKY+PRR+
Sbjct: 28360 RAMHMKEHPDYKYRPRRK 28307
>gb|AC010573.3| Drosophila melanogaster 3L BAC RPCI98-2M13 (Roswell Park Cancer Institute
Drosophila BAC Library) complete sequence
Length = 181921
Score = 112 bits (281), Expect = 6e-23
Identities = 48/76 (63%), Positives = 63/76 (82%)
Frame = -1
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW++ RR++A P +HN+E+SK LG W+LL ES+KRPFI+EA+RLR
Sbjct: 104107 HIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRA 103928
Query: 157 QHKKDHPDYKYQPRRR 172
H K+HPDYKY+PRR+
Sbjct: 103927 LHMKEHPDYKYRPRRK 103880
Score = 87.4 bits (215), Expect = 3e-15
Identities = 38/64 (59%), Positives = 49/64 (76%)
Frame = -2
Query: 92 NKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEA 151
+ S H+KRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LL E KRPFI+EA
Sbjct: 33921 HNSHDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEA 33742
Query: 152 ERLR 155
+RLR
Sbjct: 33741 KRLR 33730
Score = 62.8 bits (151), Expect = 7e-08
Identities = 25/48 (52%), Positives = 38/48 (79%)
Frame = -2
Query: 93 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLN 140
+++ H+KRPMNAFMVW++ RRK+A P +HN+E+SK LGK +++N
Sbjct: 52395 QNEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGKFSKIVN 52252
Score = 38.1 bits (87), Expect(2) = 4e-05
Identities = 16/24 (66%), Positives = 20/24 (82%)
Frame = -3
Query: 132 LGKLWRLLNESDKRPFIEEAERLR 155
LG W+LL E +KRPFI+EA+RLR
Sbjct: 45890 LGAEWKLLTEEEKRPFIDEAKRLR 45819
Score = 34.7 bits (78), Expect(2) = 4e-05
Identities = 12/18 (66%), Positives = 15/18 (82%)
Frame = -1
Query: 155 RMQHKKDHPDYKYQPRRR 172
R H K+HPDYKY+PRR+
Sbjct: 45763 RAMHMKEHPDYKYRPRRK 45710
>ref|NM_079342.1| Drosophila melanogaster Dichaete (D), mRNA
Length = 1890
Score = 112 bits (281), Expect = 6e-23
Identities = 48/76 (63%), Positives = 63/76 (82%)
Frame = +3
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW++ RR++A P +HN+E+SK LG W+LL ES+KRPFI+EA+RLR
Sbjct: 573 HIKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRA 752
Query: 157 QHKKDHPDYKYQPRRR 172
H K+HPDYKY+PRR+
Sbjct: 753 LHMKEHPDYKYRPRRK 800
>emb|X79250.1|HMASOX3 H.momus (Ascidian) Asox3 mRNA
Length = 170
Score = 112 bits (281), Expect = 6e-23
Identities = 52/56 (92%), Positives = 55/56 (97%)
Frame = +2
Query: 106 MVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKD 161
MVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNES+KRPF+EEAERLR+QH KD
Sbjct: 2 MVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHMKD 169
>dbj|AB011803.1|AB011803 Gallus gallus mRNA for SOX3, complete cds
Length = 1824
Score = 112 bits (279), Expect = 1e-22
Identities = 47/83 (56%), Positives = 67/83 (80%)
Frame = +2
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G+ + VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL++++KRPFI+
Sbjct: 308 GAGSDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDAEKRPFID 487
Query: 150 EAERLRMQHKKDHPDYKYQPRRR 172
EA+RLR H K++PDYKY+PRR+
Sbjct: 488 EAKRLRAVHMKEYPDYKYRPRRK 556
>gb|U12467.1|GGU12467 Gallus gallus Sox3 transcription factor (Sox3) mRNA, complete cds
Length = 1808
Score = 111 bits (278), Expect = 1e-22
Identities = 47/84 (55%), Positives = 67/84 (78%)
Frame = +3
Query: 89 NGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFI 148
+G + VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL++++KRPFI
Sbjct: 294 DGCRSDQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDAEKRPFI 473
Query: 149 EEAERLRMQHKKDHPDYKYQPRRR 172
+EA+RLR H K++PDYKY+PRR+
Sbjct: 474 DEAKRLRAVHMKEYPDYKYRPRRK 545
>gb|M86315.1|ALLAES4 Alligator AES4 gene, partial cds
Length = 216
Score = 111 bits (278), Expect = 1e-22
Identities = 49/72 (68%), Positives = 60/72 (83%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+Q RRK+ +Q P +HNAE+SK LGK W+LL +SDK PFI EAERLR++
Sbjct: 1 VKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLK 180
Query: 158 HKKDHPDYKYQP 169
H D+PDYKY+P
Sbjct: 181 HMADYPDYKYRP 216
>ref|NM_009234.1| Mus musculus SRY-box containing gene 11 (Sox11), mRNA
Length = 2896
Score = 111 bits (277), Expect = 2e-22
Identities = 46/76 (60%), Positives = 63/76 (82%)
Frame = +1
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW++ RRK+ +Q P +HNAE+SK LGK W++L +S+K PFI EA RLR+
Sbjct: 430 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAGRLRL 609
Query: 157 QHKKDHPDYKYQPRRR 172
+H D+PDYKY+PR++
Sbjct: 610 KHMADYPDYKYRPRKK 657
>gb|AF009414.1|AF009414 Mus musculus SOX11 (Sox11) mRNA, complete cds
Length = 2896
Score = 111 bits (277), Expect = 2e-22
Identities = 46/76 (60%), Positives = 63/76 (82%)
Frame = +1
Query: 97 HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRM 156
H+KRPMNAFMVW++ RRK+ +Q P +HNAE+SK LGK W++L +S+K PFI EA RLR+
Sbjct: 430 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAGRLRL 609
Query: 157 QHKKDHPDYKYQPRRR 172
+H D+PDYKY+PR++
Sbjct: 610 KHMADYPDYKYRPRKK 657
>dbj|AB014474.1|AB014474 Mus musculus Sox15 gene, complete cds
Length = 2004
Score = 110 bits (276), Expect = 2e-22
Identities = 46/75 (61%), Positives = 62/75 (82%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+ RR++A Q P +HN+E+SK LG W+LL + +KRPF+EEA+RLR +
Sbjct: 454 VKRPMNAFMVWSSVQRRQMAQQNPEMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRLRAR 633
Query: 158 HKKDHPDYKYQPRRR 172
H +D+PDYKY+PRR+
Sbjct: 634 HLRDYPDYKYRPRRK 678
>emb|AL603707.5|AL603707 Mouse DNA sequence from clone RP23-422L16 on chromosome 11, complete
sequence [Mus musculus]
Length = 234182
Score = 110 bits (275), Expect = 3e-22
Identities = 46/75 (61%), Positives = 62/75 (82%)
Frame = +3
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+ RR++A Q P +HN+E+SK LG W+LL + +KRPF+EEA+RLR +
Sbjct: 34740 VKRPMNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRLRAR 34919
Query: 158 HKKDHPDYKYQPRRR 172
H +D+PDYKY+PRR+
Sbjct: 34920 HLRDYPDYKYRPRRK 34964
>ref|NM_076860.1| sex-determining protein SRY
Length = 852
Score = 110 bits (275), Expect = 3e-22
Identities = 47/80 (58%), Positives = 65/80 (80%)
Frame = +1
Query: 93 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAE 152
K+ VKRPMNAFMVW++ R+K+A + P +HN+E+SK LG W++L+E +KRPFI+EA+
Sbjct: 163 KNDDRVKRPMNAFMVWSRGQRKKMALENPKMHNSEISKRLGTEWKMLSEQEKRPFIDEAK 342
Query: 153 RLRMQHKKDHPDYKYQPRRR 172
RLR H K+HPDYKY+PRR+
Sbjct: 343 RLRAIHMKEHPDYKYRPRRK 402
>ref|NM_059144.1| HMG-box containing protein
Length = 3213
Score = 110 bits (275), Expect = 3e-22
Identities = 46/80 (57%), Positives = 62/80 (77%)
Frame = +1
Query: 93 KSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAE 152
KS H+KRPMNAFMVW+Q RRK+ + P +HNAE+SK LG WR L + +K PF+ EAE
Sbjct: 262 KSSNHIKRPMNAFMVWSQMERRKICEHQPDMHNAEISKQLGSRWRSLTDEEKAPFVAEAE 441
Query: 153 RLRMQHKKDHPDYKYQPRRR 172
RLR+ H +++PDYKY+PR++
Sbjct: 442 RLRVCHMQEYPDYKYKPRKK 501
>dbj|AB039223.1|AB039223 Mus spicilegus Sox15 gene for HMG-box transcription factor, partial
cds, strain:ZBN
Length = 1343
Score = 110 bits (275), Expect = 3e-22
Identities = 46/75 (61%), Positives = 62/75 (82%)
Frame = +2
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+ RR++A Q P +HN+E+SK LG W+LL + +KRPF+EEA+RLR +
Sbjct: 119 VKRPMNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRLRAR 298
Query: 158 HKKDHPDYKYQPRRR 172
H +D+PDYKY+PRR+
Sbjct: 299 HLRDYPDYKYRPRRK 343
>dbj|AB039222.1|AB039222 Mus musculus Sox15 gene for HMG-box transcription factor, partial
cds, strain:NJL/Msf
Length = 1343
Score = 110 bits (275), Expect = 3e-22
Identities = 46/75 (61%), Positives = 62/75 (82%)
Frame = +2
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+ RR++A Q P +HN+E+SK LG W+LL + +KRPF+EEA+RLR +
Sbjct: 119 VKRPMNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRLRAR 298
Query: 158 HKKDHPDYKYQPRRR 172
H +D+PDYKY+PRR+
Sbjct: 299 HLRDYPDYKYRPRRK 343
>dbj|AB039221.1|AB039221 Mus musculus Sox15 gene for HMG-box transcription factor, partial
cds, strain:HMI/Msf
Length = 1343
Score = 110 bits (275), Expect = 3e-22
Identities = 46/75 (61%), Positives = 62/75 (82%)
Frame = +2
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+ RR++A Q P +HN+E+SK LG W+LL + +KRPF+EEA+RLR +
Sbjct: 119 VKRPMNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRLRAR 298
Query: 158 HKKDHPDYKYQPRRR 172
H +D+PDYKY+PRR+
Sbjct: 299 HLRDYPDYKYRPRRK 343
>dbj|AB039220.1|AB039220 Mus musculus Sox15 gene for HMG-box transcription factor, partial
cds, strain:SWN/Msf
Length = 1343
Score = 110 bits (275), Expect = 3e-22
Identities = 46/75 (61%), Positives = 62/75 (82%)
Frame = +2
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+ RR++A Q P +HN+E+SK LG W+LL + +KRPF+EEA+RLR +
Sbjct: 119 VKRPMNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRLRAR 298
Query: 158 HKKDHPDYKYQPRRR 172
H +D+PDYKY+PRR+
Sbjct: 299 HLRDYPDYKYRPRRK 343
>dbj|AB039219.1|AB039219 Mus musculus Sox15 gene for HMG-box transcription factor, partial
cds, strain:pgn2
Length = 1343
Score = 110 bits (275), Expect = 3e-22
Identities = 46/75 (61%), Positives = 62/75 (82%)
Frame = +2
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+ RR++A Q P +HN+E+SK LG W+LL + +KRPF+EEA+RLR +
Sbjct: 119 VKRPMNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRLRAR 298
Query: 158 HKKDHPDYKYQPRRR 172
H +D+PDYKY+PRR+
Sbjct: 299 HLRDYPDYKYRPRRK 343
>dbj|AB039218.1|AB039218 Mus musculus Sox15 gene for HMG-box transcription factor, partial
cds, strain:MSM/Msf
Length = 1343
Score = 110 bits (275), Expect = 3e-22
Identities = 46/75 (61%), Positives = 62/75 (82%)
Frame = +2
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+ RR++A Q P +HN+E+SK LG W+LL + +KRPF+EEA+RLR +
Sbjct: 119 VKRPMNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRLRAR 298
Query: 158 HKKDHPDYKYQPRRR 172
H +D+PDYKY+PRR+
Sbjct: 299 HLRDYPDYKYRPRRK 343
>dbj|AB039217.1|AB039217 Mus musculus Sox15 gene for HMG-box transcription factor, partial
cds, strain:CAST/Ei
Length = 1343
Score = 110 bits (275), Expect = 3e-22
Identities = 46/75 (61%), Positives = 62/75 (82%)
Frame = +2
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+ RR++A Q P +HN+E+SK LG W+LL + +KRPF+EEA+RLR +
Sbjct: 119 VKRPMNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRLRAR 298
Query: 158 HKKDHPDYKYQPRRR 172
H +D+PDYKY+PRR+
Sbjct: 299 HLRDYPDYKYRPRRK 343
>dbj|AB039216.1|AB039216 Mus musculus Sox15 gene for HMG-box transcription factor, partial
cds, strain:BLG2/Msf
Length = 1343
Score = 110 bits (275), Expect = 3e-22
Identities = 46/75 (61%), Positives = 62/75 (82%)
Frame = +2
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+ RR++A Q P +HN+E+SK LG W+LL + +KRPF+EEA+RLR +
Sbjct: 119 VKRPMNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRLRAR 298
Query: 158 HKKDHPDYKYQPRRR 172
H +D+PDYKY+PRR+
Sbjct: 299 HLRDYPDYKYRPRRK 343
>dbj|AB039215.1|AB039215 Mus musculus Sox15 gene for HMG-box transcription factor, partial
cds, strain:BFM/2Msf
Length = 1343
Score = 110 bits (275), Expect = 3e-22
Identities = 46/75 (61%), Positives = 62/75 (82%)
Frame = +2
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+ RR++A Q P +HN+E+SK LG W+LL + +KRPF+EEA+RLR +
Sbjct: 119 VKRPMNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRLRAR 298
Query: 158 HKKDHPDYKYQPRRR 172
H +D+PDYKY+PRR+
Sbjct: 299 HLRDYPDYKYRPRRK 343
>dbj|AB039214.1|AB039214 Mus musculus Sox15 gene for HMG-box transcription factor, partial
cds, strain:C57BL/10SnJ
Length = 1343
Score = 110 bits (275), Expect = 3e-22
Identities = 46/75 (61%), Positives = 62/75 (82%)
Frame = +2
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+ RR++A Q P +HN+E+SK LG W+LL + +KRPF+EEA+RLR +
Sbjct: 119 VKRPMNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRLRAR 298
Query: 158 HKKDHPDYKYQPRRR 172
H +D+PDYKY+PRR+
Sbjct: 299 HLRDYPDYKYRPRRK 343
>gb|AF182945.1|AF182945 Mus musculus SOX15 (Sox15) mRNA, complete cds
Length = 696
Score = 110 bits (275), Expect = 3e-22
Identities = 46/75 (61%), Positives = 62/75 (82%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+ RR++A Q P +HN+E+SK LG W+LL + +KRPF+EEA+RLR +
Sbjct: 139 VKRPMNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRLRAR 318
Query: 158 HKKDHPDYKYQPRRR 172
H +D+PDYKY+PRR+
Sbjct: 319 HLRDYPDYKYRPRRK 363
>gb|M86313.1|ALLAES1DNA Alligator AES1 gene, partial cds
Length = 216
Score = 110 bits (274), Expect = 4e-22
Identities = 49/72 (68%), Positives = 59/72 (81%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+Q RRK+ +Q P +HNAE+SK LGK W+LL SDK PFI EAERLR++
Sbjct: 1 VKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKGSDKIPFIREAERLRLK 180
Query: 158 HKKDHPDYKYQP 169
H D+PDYKY+P
Sbjct: 181 HMADYPDYKYRP 216
>emb|X94125.1|MMSOX3 M.musculus SOX3 gene
Length = 1150
Score = 109 bits (273), Expect = 5e-22
Identities = 47/83 (56%), Positives = 65/83 (77%)
Frame = +2
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G + VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL +++KRPFI+
Sbjct: 203 GGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFID 382
Query: 150 EAERLRMQHKKDHPDYKYQPRRR 172
EA+RLR H K++PDYKY+PRR+
Sbjct: 383 EAKRLRAVHMKEYPDYKYRPRRK 451
>gb|L12013.1|CDSCSDE Chelydra serpentina sex determining sra-4 DNA
Length = 224
Score = 109 bits (273), Expect = 5e-22
Identities = 48/72 (66%), Positives = 60/72 (82%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+Q RRK+ +Q P +HNAE+SK LGK W+LL +SDK PFI EAERLR++
Sbjct: 7 VKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLK 186
Query: 158 HKKDHPDYKYQP 169
H D+P+YKY+P
Sbjct: 187 HMADYPNYKYRP 222
>gb|AF434675.1|AF434675 Mus musculus transcription factor SOX3 (Sox3) gene, complete cds
Length = 18632
Score = 109 bits (273), Expect = 5e-22
Identities = 47/83 (56%), Positives = 65/83 (77%)
Frame = +2
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G + VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL +++KRPFI+
Sbjct: 5516 GGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFID 5695
Query: 150 EAERLRMQHKKDHPDYKYQPRRR 172
EA+RLR H K++PDYKY+PRR+
Sbjct: 5696 EAKRLRAVHMKEYPDYKYRPRRK 5764
>ref|NM_009237.1| Mus musculus SRY-box containing gene 3 (Sox3), mRNA
Length = 1128
Score = 109 bits (273), Expect = 5e-22
Identities = 47/83 (56%), Positives = 65/83 (77%)
Frame = +1
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G + VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL +++KRPFI+
Sbjct: 181 GGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFID 360
Query: 150 EAERLRMQHKKDHPDYKYQPRRR 172
EA+RLR H K++PDYKY+PRR+
Sbjct: 361 EAKRLRAVHMKEYPDYKYRPRRK 429
>emb|X79821.1|DRZFSOX19 D.rerio Zf Sox 19 mRNA
Length = 2028
Score = 109 bits (273), Expect = 5e-22
Identities = 46/76 (60%), Positives = 64/76 (83%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL +++KRPFI+EA+RLR
Sbjct: 316 VKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAL 495
Query: 158 HKKDHPDYKYQPRRRK 173
H K++PDYKY+PRR++
Sbjct: 496 HMKEYPDYKYKPRRKQ 543
>ref|NM_005634.1| Homo sapiens SRY (sex determining region Y)-box 3 (SOX3), mRNA
Length = 1332
Score = 109 bits (272), Expect = 6e-22
Identities = 47/83 (56%), Positives = 65/83 (77%)
Frame = +1
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G + VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL +++KRPFI+
Sbjct: 391 GGGTDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFID 570
Query: 150 EAERLRMQHKKDHPDYKYQPRRR 172
EA+RLR H K++PDYKY+PRR+
Sbjct: 571 EAKRLRAVHMKEYPDYKYRPRRK 639
>ref|XM_010069.2| Homo sapiens SRY (sex determining region Y)-box 3 (SOX3), mRNA
Length = 1341
Score = 109 bits (272), Expect = 6e-22
Identities = 47/83 (56%), Positives = 65/83 (77%)
Frame = +1
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G + VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL +++KRPFI+
Sbjct: 391 GGGTDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFID 570
Query: 150 EAERLRMQHKKDHPDYKYQPRRR 172
EA+RLR H K++PDYKY+PRR+
Sbjct: 571 EAKRLRAVHMKEYPDYKYRPRRK 639
>gb|AF264713.1|AF264713 Homo sapiens sex determining region Y box 3 (SOX3) gene, complete
cds
Length = 1692
Score = 109 bits (272), Expect = 6e-22
Identities = 47/83 (56%), Positives = 65/83 (77%)
Frame = +1
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G + VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL +++KRPFI+
Sbjct: 508 GGGTDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFID 687
Query: 150 EAERLRMQHKKDHPDYKYQPRRR 172
EA+RLR H K++PDYKY+PRR+
Sbjct: 688 EAKRLRAVHMKEYPDYKYRPRRK 756
>emb|AJ322962.1|HSA322962 Homo sapiens genomic sequence surrounding NotI site, clone NR1-ML6C
Length = 664
Score = 109 bits (272), Expect = 6e-22
Identities = 47/83 (56%), Positives = 65/83 (77%)
Frame = -3
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G + VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL +++KRPFI+
Sbjct: 341 GGGTDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFID 162
Query: 150 EAERLRMQHKKDHPDYKYQPRRR 172
EA+RLR H K++PDYKY+PRR+
Sbjct: 161 EAKRLRAVHMKEYPDYKYRPRRK 93
>emb|AL121875.10|HSBA51C14 Human DNA sequence from clone RP11-51C14 on chromosome Xq26.2-27.3,
complete sequence [Homo sapiens]
Length = 148598
Score = 109 bits (272), Expect = 6e-22
Identities = 47/83 (56%), Positives = 65/83 (77%)
Frame = -1
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G + VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL +++KRPFI+
Sbjct: 106853 GGGTDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFID 106674
Query: 150 EAERLRMQHKKDHPDYKYQPRRR 172
EA+RLR H K++PDYKY+PRR+
Sbjct: 106673 EAKRLRAVHMKEYPDYKYRPRRK 106605
>emb|X71135.1|HSSOX3 H.sapiens sox3 gene
Length = 2509
Score = 109 bits (272), Expect = 6e-22
Identities = 47/83 (56%), Positives = 65/83 (77%)
Frame = +1
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G + VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL +++KRPFI+
Sbjct: 832 GGGTDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFID 1011
Query: 150 EAERLRMQHKKDHPDYKYQPRRR 172
EA+RLR H K++PDYKY+PRR+
Sbjct: 1012EAKRLRAVHMKEYPDYKYRPRRK 1080
>gb|S69429.1|S69429 testis-determining gene/SRY homolog [Sminthopsis
macroura=striped-faced dunnarts, Genomic, 855 nt]
Length = 855
Score = 108 bits (271), Expect = 8e-22
Identities = 47/83 (56%), Positives = 65/83 (77%)
Frame = +1
Query: 90 GSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 149
G + VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL +++KRPFI+
Sbjct: 322 GGGGDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFID 501
Query: 150 EAERLRMQHKKDHPDYKYQPRRR 172
EA+RLR H K++PDYKY+PRR+
Sbjct: 502 EAKRLRAVHMKEYPDYKYRPRRK 570
>emb|AJ252125.1|DME252125 Drosophila melanogaster mRNA for Sox14 protein (Sox14 gene)
Length = 1876
Score = 108 bits (270), Expect = 1e-21
Identities = 56/133 (42%), Positives = 85/133 (63%), Gaps = 12/133 (9%)
Frame = +1
Query: 53 QDSEADDDKFPVCIREAVSQVLSGYDWTLV--PMPVRVNGSNK----------SKPHVKR 100
++SE D ++ P ++ + G D +LV V VN S S H+KR
Sbjct: 640 RESEMDGERSPSHSGHEMTLSMDGIDSSLVFGSARVPVNSSTPYSDATRTKKHSPGHIKR 819
Query: 101 PMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKK 160
PMNAFMVW+Q RRK+ ++ P LHNAE+SK LG+ W+LL++ DK+P+I EAE+LR H
Sbjct: 820 PMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQLLSKDDKQPYIIEAEKLRKLHMI 999
Query: 161 DHPDYKYQPRRRK 173
++P+YKY+P++++
Sbjct: 1000EYPNYKYRPQKKQ 1038
>gb|AF271787.1|AF271787 Branchiostoma floridae HMG box transcription factor AmphiSox1/2/3
mRNA, complete cds
Length = 1910
Score = 108 bits (270), Expect = 1e-21
Identities = 43/78 (55%), Positives = 65/78 (83%)
Frame = +1
Query: 95 KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERL 154
K HVKRPMNAFMVW++ RRK+A+ P +HN+E+S+ LG++W+ L+ +K+PF+EE++RL
Sbjct: 121 KDHVKRPMNAFMVWSRIQRRKIAEDNPKMHNSEISRRLGEMWKELSAEEKKPFVEESKRL 300
Query: 155 RMQHKKDHPDYKYQPRRR 172
R +H + +PDYKY+PRR+
Sbjct: 301 RAEHMEKYPDYKYRPRRK 354
>gb|U76522.1|PGU76522 Petrogale godmani sex determining region Y protein (SRY) gene,
partial cds
Length = 564
Score = 108 bits (270), Expect = 1e-21
Identities = 45/76 (59%), Positives = 66/76 (86%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFM+W+++ RRK+A + P +HN+E+SK LG W++L +++K+PFI+EAERLR +
Sbjct: 85 VKRPMNAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAK 264
Query: 158 HKKDHPDYKYQPRRRK 173
H+++ PDYKYQPRR+K
Sbjct: 265 HREEFPDYKYQPRRKK 312
>gb|U76521.1|PSU76521 Petrogale sharmani sex determining region Y protein (SRY) gene,
partial cds
Length = 564
Score = 108 bits (270), Expect = 1e-21
Identities = 45/76 (59%), Positives = 66/76 (86%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFM+W+++ RRK+A + P +HN+E+SK LG W++L +++K+PFI+EAERLR +
Sbjct: 85 VKRPMNAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAK 264
Query: 158 HKKDHPDYKYQPRRRK 173
H+++ PDYKYQPRR+K
Sbjct: 265 HREEFPDYKYQPRRKK 312
>gb|U76520.1|PIU76520 Petrogale inornata sex determining region Y protein (SRY) gene,
partial cds
Length = 564
Score = 108 bits (270), Expect = 1e-21
Identities = 45/76 (59%), Positives = 66/76 (86%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFM+W+++ RRK+A + P +HN+E+SK LG W++L +++K+PFI+EAERLR +
Sbjct: 85 VKRPMNAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAK 264
Query: 158 HKKDHPDYKYQPRRRK 173
H+++ PDYKYQPRR+K
Sbjct: 265 HREEFPDYKYQPRRKK 312
>gb|U76519.1|PHU76519 Petrogale herberti sex determining region Y protein (SRY) gene,
partial cds
Length = 564
Score = 108 bits (270), Expect = 1e-21
Identities = 45/76 (59%), Positives = 66/76 (86%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFM+W+++ RRK+A + P +HN+E+SK LG W++L +++K+PFI+EAERLR +
Sbjct: 85 VKRPMNAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAK 264
Query: 158 HKKDHPDYKYQPRRRK 173
H+++ PDYKYQPRR+K
Sbjct: 265 HREEFPDYKYQPRRKK 312
>gb|U76517.1|PLU76517 Petrogale lateralis purpureicollis sex determining region Y protein
(SRY) gene, partial cds
Length = 564
Score = 108 bits (270), Expect = 1e-21
Identities = 45/76 (59%), Positives = 66/76 (86%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFM+W+++ RRK+A + P +HN+E+SK LG W++L +++K+PFI+EAERLR +
Sbjct: 85 VKRPMNAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAK 264
Query: 158 HKKDHPDYKYQPRRRK 173
H+++ PDYKYQPRR+K
Sbjct: 265 HREEFPDYKYQPRRKK 312
>gb|U76516.1|PXU76516 Petrogale xanthopus xanthopus sex determining region Y protein
(SRY) gene, partial cds
Length = 564
Score = 108 bits (270), Expect = 1e-21
Identities = 45/76 (59%), Positives = 66/76 (86%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFM+W+++ RRK+A + P +HN+E+SK LG W++L +++K+PFI+EAERLR +
Sbjct: 85 VKRPMNAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAK 264
Query: 158 HKKDHPDYKYQPRRRK 173
H+++ PDYKYQPRR+K
Sbjct: 265 HREEFPDYKYQPRRKK 312
>gb|U76515.1|PAU76515 Petrogale assimilis sex determining region Y protein (SRY) gene,
partial cds
Length = 564
Score = 108 bits (270), Expect = 1e-21
Identities = 45/76 (59%), Positives = 66/76 (86%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFM+W+++ RRK+A + P +HN+E+SK LG W++L +++K+PFI+EAERLR +
Sbjct: 85 VKRPMNAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAK 264
Query: 158 HKKDHPDYKYQPRRRK 173
H+++ PDYKYQPRR+K
Sbjct: 265 HREEFPDYKYQPRRKK 312
>gb|U76514.1|PCU76514 Petrogale coenensis sex determining region Y protein (SRY) gene,
partial cds
Length = 564
Score = 108 bits (270), Expect = 1e-21
Identities = 45/76 (59%), Positives = 66/76 (86%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFM+W+++ RRK+A + P +HN+E+SK LG W++L +++K+PFI+EAERLR +
Sbjct: 85 VKRPMNAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAK 264
Query: 158 HKKDHPDYKYQPRRRK 173
H+++ PDYKYQPRR+K
Sbjct: 265 HREEFPDYKYQPRRKK 312
>gb|U76513.1|PMU76513 Petrogale mareeba sex determining region Y protein (SRY) gene,
partial cds
Length = 564
Score = 108 bits (270), Expect = 1e-21
Identities = 45/76 (59%), Positives = 66/76 (86%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFM+W+++ RRK+A + P +HN+E+SK LG W++L +++K+PFI+EAERLR +
Sbjct: 85 VKRPMNAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAK 264
Query: 158 HKKDHPDYKYQPRRRK 173
H+++ PDYKYQPRR+K
Sbjct: 265 HREEFPDYKYQPRRKK 312
>gb|U76512.1|PXU76512 Petrogale xanthopus celeris sex determining region Y protein (SRY)
gene, partial cds
Length = 564
Score = 108 bits (270), Expect = 1e-21
Identities = 45/76 (59%), Positives = 66/76 (86%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFM+W+++ RRK+A + P +HN+E+SK LG W++L +++K+PFI+EAERLR +
Sbjct: 85 VKRPMNAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAK 264
Query: 158 HKKDHPDYKYQPRRRK 173
H+++ PDYKYQPRR+K
Sbjct: 265 HREEFPDYKYQPRRKK 312
>gb|U76511.1|PBU76511 Petrogale brachyotis sex determining region Y protein (SRY) gene,
partial cds
Length = 564
Score = 108 bits (270), Expect = 1e-21
Identities = 45/76 (59%), Positives = 66/76 (86%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFM+W+++ RRK+A + P +HN+E+SK LG W++L +++K+PFI+EAERLR +
Sbjct: 85 VKRPMNAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAK 264
Query: 158 HKKDHPDYKYQPRRRK 173
H+++ PDYKYQPRR+K
Sbjct: 265 HREEFPDYKYQPRRKK 312
>gb|U76510.1|PBU76510 Petrogale burbidgei sex determining region Y protein (SRY) gene,
partial cds
Length = 564
Score = 108 bits (270), Expect = 1e-21
Identities = 45/76 (59%), Positives = 66/76 (86%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFM+W+++ RRK+A + P +HN+E+SK LG W++L +++K+PFI+EAERLR +
Sbjct: 85 VKRPMNAFMIWSRSQRRKVALENPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAK 264
Query: 158 HKKDHPDYKYQPRRRK 173
H+++ PDYKYQPRR+K
Sbjct: 265 HREEFPDYKYQPRRKK 312
>ref|NM_057546.1| Drosophila melanogaster Sox box protein 14 (Sox14), transcript
variant Sox14-P1|CDS, mRNA
Length = 2010
Score = 108 bits (270), Expect = 1e-21
Identities = 56/133 (42%), Positives = 85/133 (63%), Gaps = 12/133 (9%)
Frame = +1
Query: 53 QDSEADDDKFPVCIREAVSQVLSGYDWTLV--PMPVRVNGSNK----------SKPHVKR 100
++SE D ++ P ++ + G D +LV V VN S S H+KR
Sbjct: 388 RESEMDGERSPSHSGHEMTLSMDGIDSSLVFGSARVPVNSSTPYSDATRTKKHSPGHIKR 567
Query: 101 PMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKK 160
PMNAFMVW+Q RRK+ ++ P LHNAE+SK LG+ W+LL++ DK+P+I EAE+LR H
Sbjct: 568 PMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQLLSKDDKQPYIIEAEKLRKLHMI 747
Query: 161 DHPDYKYQPRRRK 173
++P+YKY+P++++
Sbjct: 748 EYPNYKYRPQKKQ 786
>emb|AJ404687.1|DRE404687 Danio rerio mRNA for Sox31 protein
Length = 879
Score = 108 bits (269), Expect = 1e-21
Identities = 46/75 (61%), Positives = 62/75 (82%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW++ RRK+A + P +HN+E+SK LG W+LL + +KRPFI+EA+RLR
Sbjct: 154 VKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDVEKRPFIDEAKRLRAV 333
Query: 158 HKKDHPDYKYQPRRR 172
H K++PDYKY+PRR+
Sbjct: 334 HMKEYPDYKYKPRRK 378
>emb|X71136.1|HSSOXA H.sapiens mRNA for soxA
Length = 229
Score = 108 bits (269), Expect = 1e-21
Identities = 46/71 (64%), Positives = 60/71 (83%)
Frame = +1
Query: 102 MNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKD 161
MNAFMVW++A RRK+A + P +HN+E+SK LG W+LL ES+KRPFI+EA+RLR H K+
Sbjct: 1 MNAFMVWSRAQRRKMAQENPKMHNSEISKPLGAEWKLLTESEKRPFIDEAKRLRAMHMKE 180
Query: 162 HPDYKYQPRRR 172
HPDYKY+PRR+
Sbjct: 181 HPDYKYRPRRK 213
>gb|U76518.1|PPU76518 Petrogale penicillata sex determining region Y protein (SRY) gene,
partial cds
Length = 564
Score = 107 bits (266), Expect = 3e-21
Identities = 45/76 (59%), Positives = 65/76 (85%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFM+W+++ RRK+A P +HN+E+SK LG W++L +++K+PFI+EAERLR +
Sbjct: 85 VKRPMNAFMIWSRSQRRKVALVNPKMHNSEISKHLGFTWKMLPDNEKQPFIDEAERLRAK 264
Query: 158 HKKDHPDYKYQPRRRK 173
H+++ PDYKYQPRR+K
Sbjct: 265 HREEFPDYKYQPRRKK 312
>gb|M86338.1|TELMG43DNA Gecko MG43 gene, partial cds
Length = 216
Score = 107 bits (266), Expect = 3e-21
Identities = 45/72 (62%), Positives = 61/72 (84%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+Q RRK+ DQ+P +HNAE+S+ LG+ W+LL +S+K PF++EA RLR++
Sbjct: 1 VKRPMNAFMVWSQNERRKIMDQWPDMHNAEISERLGRRWQLLQDSEKIPFVKEAGRLRLK 180
Query: 158 HKKDHPDYKYQP 169
H D+PDYKY+P
Sbjct: 181 HMADYPDYKYRP 216
>gb|L12020.1|CDSCSDH Chelydra serpentina sex determining sra-1 DNA
Length = 225
Score = 106 bits (264), Expect = 5e-21
Identities = 47/70 (67%), Positives = 58/70 (82%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+Q RRK+ +Q P +HNAE+SK LGK W+LL +SDK PFI EAERLR++
Sbjct: 7 VKRPMNAFMVWSQNERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLK 186
Query: 158 HKKDHPDYKY 167
H D+P+YKY
Sbjct: 187 HMADYPNYKY 216
>gb|M86337.1|TELMG42DNA Gecko MG42 gene, partial cds
Length = 216
Score = 105 bits (263), Expect = 7e-21
Identities = 45/72 (62%), Positives = 61/72 (84%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+Q RRK+ DQ+P +HNAE+SK LG+ W+LL +S+K PF++EA RLR++
Sbjct: 1 VKRPMNAFMVWSQNERRKIMDQWPDMHNAEISKRLGRPWQLLQDSEKIPFVKEAGRLRVK 180
Query: 158 HKKDHPDYKYQP 169
H D+P+YKY+P
Sbjct: 181 HMADYPNYKYRP 216
>gb|M86312.1|ALLADW5DNA Alligator ADW5 gene, partial cds
Length = 216
Score = 105 bits (263), Expect = 7e-21
Identities = 45/72 (62%), Positives = 60/72 (82%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+Q RRK+ DQ+P +HNAE+SK LG+ W+LL +S+K PF++EA LR++
Sbjct: 1 VKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVKEAGGLRLK 180
Query: 158 HKKDHPDYKYQP 169
H D+PDYKY+P
Sbjct: 181 HMADYPDYKYRP 216
>dbj|AB004572.1|AB004572 Equus caballus mRNA for sex-determining protein, complete cds
Length = 1403
Score = 105 bits (262), Expect = 9e-21
Identities = 47/86 (54%), Positives = 64/86 (73%)
Frame = +1
Query: 87 RVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRP 146
R NG + VKRPMNAFMVW++ RRK+A + P L N+E+SK LG W++L E++K P
Sbjct: 226 RGNGRENGQDRVKRPMNAFMVWSRDHRRKVALENPQLQNSEISKRLGCQWKMLTEAEKLP 405
Query: 147 FIEEAERLRMQHKKDHPDYKYQPRRR 172
F EEA+RLR H++ +PDYKY+PRR+
Sbjct: 406 FFEEAQRLRAMHQEKYPDYKYRPRRK 483
>gb|M86310.1|ALLADW2DNA Alligator ADW2 gene, partial cds
Length = 216
Score = 105 bits (262), Expect = 9e-21
Identities = 45/72 (62%), Positives = 60/72 (82%)
Frame = +1
Query: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
VKRPMNAFMVW+Q RRK+ DQ+P +HNAE+SK LG+ W+LL +S+K PF++ AERLR++
Sbjct: 1 VKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVKGAERLRLK 180
Query: 158 HKKDHPDYKYQP 169
H D+ DYKY+P
Sbjct: 181 HMADYADYKYRP 216
>ref|NG_000580.1| Drosophila melanogaster Peptidylglycine-alpha-hydroxylating
monooxygenase (Phm) on chromosome 2
Length = 11001
Score = 105 bits (261), Expect = 1e-20
Identities = 44/80 (55%), Positives = 65/80 (81%)
Frame = -3
Query: 94 SKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAER 153
S H+KRPMNAFMVW+Q RRK+ ++ P LHNAE+SK LG+ W+LL++ DK+P+I EAE+
Sbjct: 9277 SPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQLLSKDDKQPYIIEAEK 9098
Query: 154 LRMQHKKDHPDYKYQPRRRK 173
LR H ++P+YKY+P++++
Sbjct: 9097 LRKLHMIEYPNYKYRPQKKQ 9038
>gb|AC099018.1| Drosophila melanogaster, chromosome 2R, region 60A-60B, BAC clone
BACR28M05, complete sequence
Length = 154840
Score = 105 bits (261), Expect = 1e-20
Identities = 44/80 (55%), Positives = 65/80 (81%)
Frame = +3
Query: 94 SKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAER 153
S H+KRPMNAFMVW+Q RRK+ ++ P LHNAE+SK LG+ W+LL++ DK+P+I EAE+
Sbjct: 74946 SPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQLLSKDDKQPYIIEAEK 75125
Query: 154 LRMQHKKDHPDYKYQPRRRK 173
LR H ++P+YKY+P++++
Sbjct: 75126 LRKLHMIEYPNYKYRPQKKQ 75185
>gb|S46279.1|S46279 SRY homolog [Sminthopsis macroura=marsupials, mRNA, 1442 nt]
Length = 1442
Score = 105 bits (261), Expect = 1e-20
Identities = 53/87 (60%), Positives = 69/87 (78%)
Frame = +2
Query: 86 VRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKR 145
V+ N +N S VKRPMNAFMVW+Q RRK+A Q P +HN+E+SK LG W+LL++S+KR
Sbjct: 155 VKSNLANCSS-RVKRPMNAFMVWSQTQRRKVALQNPKMHNSEISKQLGVTWKLLSDSEKR 331
Query: 146 PFIEEAERLRMQHKKDHPDYKYQPRRR 172
PFI+EA+RLR +HK+ DYKYQPRR+
Sbjct: 332 PFIDEAKRLRDKHKQ-VSDYKYQPRRK 409
>ref|NG_000302.1| Drosophila melanogaster Sox box protein 14 (Sox14) on chromosome 2
Length = 13001
Score = 105 bits (261), Expect = 1e-20
Identities = 44/80 (55%), Positives = 65/80 (81%)
Frame = +3
Query: 94 SKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAER 153
S H+KRPMNAFMVW+Q RRK+ ++ P LHNAE+SK LG+ W+LL++ DK+P+I EAE+
Sbjct: 7725 SPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQLLSKDDKQPYIIEAEK 7904
Query: 154 LRMQHKKDHPDYKYQPRRRK 173
LR H ++P+YKY+P++++
Sbjct: 7905 LRKLHMIEYPNYKYRPQKKQ 7964
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 19, 2002 12:00 AM
Number of letters in database: 587,334,133
Number of sequences in database: 1,164,257
Lambda K H
0.311 0.128 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,605,587,995
Number of Sequences: 1164257
Number of extensions: 40332521
Number of successful extensions: 192565
Number of sequences better than 10.0: 1652
Number of HSP's better than 10.0 without gapping: 67681
Number of HSP's successfully gapped in prelim test: 17388
Number of HSP's that attempted gapping in prelim test: 88540
Number of HSP's gapped (non-prelim): 140403
length of query: 461
length of database: 1,627,433,809
effective HSP length: 139
effective length of query: 322
effective length of database: 1,465,602,086
effective search space: 471923871692
effective search space used: 471923871692
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 81 (35.8 bits)