TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(104 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,164,257 sequences; 587,334,133 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
emb|AJ005157.1|GGAJ5157 Gallus gallus mRNA for dimerization... 215 5e-55
ref|NM_025273.1| Mus musculus 6-pyruvoyl-tetrahydropterin s... 206 4e-52
dbj|AK007401.1|AK007401 Mus musculus 10 day old male pancre... 206 4e-52
ref|NM_000281.1| Homo sapiens 6-pyruvoyl-tetrahydropterin s... 204 8e-52
gb|BC006324.1|BC006324 Homo sapiens, 6-pyruvoyl-tetrahydrop... 204 8e-52
gb|AF082858.1|AF082858 Homo sapiens pterin carbinolamine de... 204 8e-52
gb|L41559.1|HUMPCBDA Homo sapiens pterin-4a-carbinolamine d... 204 8e-52
gb|M83740.1|RATHOMEOA Rat cofactor mRNA sequence 204 8e-52
gb|M83742.1|HUMHOMEOA Human cofactor mRNA 202 3e-51
emb|Z37525.1|XLXDCOHMR X.laevis XDCoH mRNA 197 2e-49
gb|M83741.1|MUSHOMEOA Mouse cofactor mRNA 197 2e-49
dbj|AK012465.1|AK012465 Mus musculus 11 days embryo whole b... 152 4e-36
ref|XM_047749.1| Homo sapiens hypothetical protein DKFZp566... 143 3e-33
gb|AF190051.1|AF190051 Gallus gallus hepatocyte nuclear fac... 142 4e-33
ref|NM_032151.1| Homo sapiens hypothetical protein DKFZp566... 142 7e-33
emb|AL136721.1|HSM801689 Homo sapiens mRNA; cDNA DKFZp566K1... 142 7e-33
ref|NM_059581.1| Caenorhabditis elegans 139 3e-32
ref|NG_000696.1| Drosophila melanogaster pterin-4a-carbinol... 122 7e-27
gb|AF069297.1|AF069297 Drosophila melanogaster pterin-4a-ca... 122 7e-27
ref|NM_058012.1| Drosophila melanogaster pterin-4a-carbinol... 122 7e-27
gb|AE003770.1|AE003770 Drosophila melanogaster genomic scaf... 122 7e-27
gb|AC007892.4|AC007892 Drosophila melanogaster, chromosome ... 122 7e-27
gb|AF382144.1|AF382144 Drosophila virilis pterin 4alpha-car... 121 9e-27
emb|AL646074.1|AL646074 Ralstonia solanacearum GMI1000 chro... 115 7e-25
gb|AE009620.1|AE009620 Brucella melitensis strain 16M chrom... 103 3e-21
gb|AE005698.1|AE005698 Caulobacter crescentus section 24 o... 101 1e-20
emb|AL009227.1|SPAC27D7 S.pombe chromosome I cosmid c27D7 97 2e-19
emb|AJ005158.1|GGAJ5158 Gallus gallus DCoH gene, complete CDS 95 9e-19
gb|AF098993.1|CELT10B11 Caenorhabditis elegans cosmid T10B11 95 1e-18
emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 comple... 94 2e-18
gb|AF168787.1|AF168787 Homo sapiens vanilloid receptor gene... 92 1e-17
emb|AJ005542.1|RNA005542 Rattus norvegicus DCoH gene 91 1e-17
gb|L41560.1|HUMPCBD Homo sapiens (clones HGPCD2 and HGPCD15... 90 3e-17
gb|L15410.1|HUMCDHA Human 4a-carbinolamine dehydratase gene... 89 9e-17
gb|AE008181.1|AE008181 Agrobacterium tumefaciens str. C58 c... 86 6e-16
gb|AE009214.1|AE009214 Agrobacterium tumefaciens strain C58... 86 6e-16
gb|AC078911.11| Mus musculus Strain C57BL6/J Chromosome 2 R... 55 3e-15
dbj|D90909.1|D90909 Synechocystis sp. PCC 6803 DNA, complet... 82 1e-14
dbj|AP003003.2|AP003003 Mesorhizobium loti DNA, complete ge... 78 2e-13
gb|AE006824.1|AE006824 Sulfolobus solfataricus section 183 ... 64 2e-09
gb|L15427.1|HUMCDHB Human 4a-carbinolamine dehydratase gene... 63 5e-09
gb|AC008670.5| Homo sapiens chromosome 5 clone CTB-36O1, co... 60 3e-08
gb|AC001555.1|HSAC001555 Homo sapiens (subclone 1_d8 from B... 60 3e-08
gb|L15428.1|HUMCDHC Human 4a-carbinolamine dehydratase gene... 60 4e-08
dbj|AP003596.1|AP003596 Nostoc sp. PCC 7120 DNA, complete g... 57 3e-07
dbj|AP000989.1|AP000989 Sulfolobus tokodaii genomic DNA, co... 56 5e-07
gb|L04537.1|RAT4ACRDHY Rat 4a-hydroxytetrahydrobiopterin de... 56 6e-07
gb|AE000671.1|AE000671 Aquifex aeolicus section 3 of 109 of... 56 6e-07
gb|L81893.1|HSL81893 Homo sapiens (subclone 2_e10 from P1 H... 54 2e-06
gb|AC006077.1|AC006077 Homo sapiens chromosome 5, P1 clone ... 54 2e-06
gb|AE004067.1|AE004067 Xylella fastidiosa 9a5c, section 213... 52 9e-06
dbj|AB047767.1|AB047767 Meloidogyne arenaria DNA, polymorph... 47 2e-04
dbj|AB047765.1|AB047765 Meloidogyne incognita DNA, polymorp... 47 2e-04
dbj|AB047764.1|AB047764 Meloidogyne incognita DNA, polymorp... 47 2e-04
dbj|AB047763.1|AB047763 Meloidogyne arenaria DNA, polymorph... 47 2e-04
dbj|AB047762.1|AB047762 Meloidogyne javanica DNA, polymorph... 47 2e-04
dbj|AB047766.1|AB047766 Meloidogyne javanica DNA, polymorph... 45 9e-04
ref|NM_102721.1| Arabidopsis thaliana chromosome 1 CHR1v12... 45 0.001
emb|AL583922.1|MLEPRTN6 Mycobacterium leprae strain TN comp... 43 0.004
dbj|AB047761.1|AB047761 Meloidogyne incognita DNA, polymorp... 43 0.006
emb|AL031515.1|SC5C7 Streptomyces coelicolor cosmid 5C7 42 0.007
gb|AE005081.1|AE005081 Halobacterium sp. NRC-1 section 112 ... 42 0.009
gb|U11582.1|YSCH9433 Saccharomyces cerevisiae chromosome VI... 40 0.028
emb|Z95584.1|MTCI65 Mycobacterium tuberculosis H37Rv comple... 40 0.036
gb|AD000020.1|MSGY348 Mycobacterium tuberculosis sequence f... 40 0.036
gb|AE006997.1|AE006997 Mycobacterium tuberculosis CDC1551, ... 40 0.036
gb|AC073641.3| Homo sapiens BAC clone RP11-368E14 from 2, c... 39 0.061
gb|L81892.1|HSL81892 Homo sapiens (subclone 2_h6 from P1 H6... 39 0.080
emb|Z95150.1|MTCY164 Mycobacterium tuberculosis H37Rv compl... 39 0.10
gb|AE007135.1|AE007135 Mycobacterium tuberculosis CDC1551, ... 39 0.10
gb|AE009890.1|AE009890 Pyrobaculum aerophilum strain IM2 se... 36 0.52
gb|U72662.1|MEU72662 Methylobacterium extorquens methylotro... 35 0.89
dbj|AP003570.3|AP003570 Oryza sativa genomic DNA, chromosom... 32 7.5
>emb|AJ005157.1|GGAJ5157 Gallus gallus mRNA for dimerization cofactor of HNF1
Length = 969
Score = 215 bits (548), Expect = 5e-55
Identities = 104/104 (100%), Positives = 104/104 (100%)
Frame = +2
Query: 1 MAGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKL 60
MAGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKL
Sbjct: 50 MAGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKL 229
Query: 61 DHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASLS 104
DHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASLS
Sbjct: 230 DHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASLS 361
>ref|NM_025273.1| Mus musculus 6-pyruvoyl-tetrahydropterin synthase/dimerization
cofactor of hepatocyte nuclear factor 1 alpha (TCF1)
(Pcbd), mRNA
Length = 784
Score = 206 bits (523), Expect = 4e-52
Identities = 97/104 (93%), Positives = 102/104 (97%)
Frame = +2
Query: 1 MAGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKL 60
MAGKAHRL+AEER+QLLPNLRAVGWNEVEGRDAIFK+FHFKDFNRAFGFMTRVALQAEKL
Sbjct: 56 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 235
Query: 61 DHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASLS 104
DHHPEWFNVYNKVHITLSTHEC GLSERDINLASFIEQVA S++
Sbjct: 236 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 367
>dbj|AK007401.1|AK007401 Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
enriched library,
clone:1810009G19:6-pyruvoyl-tetrahydropterin
synthase/dimerization cofactor of hepatocyte nuclear
factor 1 alpha (TCF1), full insert sequence
Length = 784
Score = 206 bits (523), Expect = 4e-52
Identities = 97/104 (93%), Positives = 102/104 (97%)
Frame = +2
Query: 1 MAGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKL 60
MAGKAHRL+AEER+QLLPNLRAVGWNEVEGRDAIFK+FHFKDFNRAFGFMTRVALQAEKL
Sbjct: 56 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 235
Query: 61 DHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASLS 104
DHHPEWFNVYNKVHITLSTHEC GLSERDINLASFIEQVA S++
Sbjct: 236 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 367
>ref|NM_000281.1| Homo sapiens 6-pyruvoyl-tetrahydropterin synthase/dimerization
cofactor of hepatocyte nuclear factor 1 alpha (TCF1)
(PCBD), mRNA
Length = 624
Score = 204 bits (520), Expect = 8e-52
Identities = 96/104 (92%), Positives = 102/104 (97%)
Frame = +3
Query: 1 MAGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKL 60
MAGKAHRL+AEER+QLLPNLRAVGWNE+EGRDAIFK+FHFKDFNRAFGFMTRVALQAEKL
Sbjct: 21 MAGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 200
Query: 61 DHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASLS 104
DHHPEWFNVYNKVHITLSTHEC GLSERDINLASFIEQVA S++
Sbjct: 201 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 332
>gb|BC006324.1|BC006324 Homo sapiens, 6-pyruvoyl-tetrahydropterin synthase/dimerization
cofactor of hepatocyte nuclear factor 1 alpha (TCF1),
clone MGC:12706 IMAGE:4138350, mRNA, complete cds
Length = 801
Score = 204 bits (520), Expect = 8e-52
Identities = 96/104 (92%), Positives = 102/104 (97%)
Frame = +1
Query: 1 MAGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKL 60
MAGKAHRL+AEER+QLLPNLRAVGWNE+EGRDAIFK+FHFKDFNRAFGFMTRVALQAEKL
Sbjct: 28 MAGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 207
Query: 61 DHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASLS 104
DHHPEWFNVYNKVHITLSTHEC GLSERDINLASFIEQVA S++
Sbjct: 208 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 339
>gb|AF082858.1|AF082858 Homo sapiens pterin carbinolamine dehydratase (PCD) mRNA, complete
cds
Length = 829
Score = 204 bits (520), Expect = 8e-52
Identities = 96/104 (92%), Positives = 102/104 (97%)
Frame = +2
Query: 1 MAGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKL 60
MAGKAHRL+AEER+QLLPNLRAVGWNE+EGRDAIFK+FHFKDFNRAFGFMTRVALQAEKL
Sbjct: 74 MAGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 253
Query: 61 DHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASLS 104
DHHPEWFNVYNKVHITLSTHEC GLSERDINLASFIEQVA S++
Sbjct: 254 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 385
>gb|L41559.1|HUMPCBDA Homo sapiens pterin-4a-carbinolamine dehydratase (PCBD) mRNA,
complete cds
Length = 626
Score = 204 bits (520), Expect = 8e-52
Identities = 96/104 (92%), Positives = 102/104 (97%)
Frame = +3
Query: 1 MAGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKL 60
MAGKAHRL+AEER+QLLPNLRAVGWNE+EGRDAIFK+FHFKDFNRAFGFMTRVALQAEKL
Sbjct: 21 MAGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 200
Query: 61 DHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASLS 104
DHHPEWFNVYNKVHITLSTHEC GLSERDINLASFIEQVA S++
Sbjct: 201 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 332
>gb|M83740.1|RATHOMEOA Rat cofactor mRNA sequence
Length = 949
Score = 204 bits (520), Expect = 8e-52
Identities = 96/104 (92%), Positives = 102/104 (97%)
Frame = +1
Query: 1 MAGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKL 60
MAGKAHRL+AEER+QLLPNLRAVGWNE+EGRDAIFK+FHFKDFNRAFGFMTRVALQAEKL
Sbjct: 235 MAGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 414
Query: 61 DHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASLS 104
DHHPEWFNVYNKVHITLSTHEC GLSERDINLASFIEQVA S++
Sbjct: 415 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 546
>gb|M83742.1|HUMHOMEOA Human cofactor mRNA
Length = 607
Score = 202 bits (515), Expect = 3e-51
Identities = 95/103 (92%), Positives = 101/103 (97%)
Frame = +2
Query: 2 AGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLD 61
AGKAHRL+AEER+QLLPNLRAVGWNE+EGRDAIFK+FHFKDFNRAFGFMTRVALQAEKLD
Sbjct: 5 AGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLD 184
Query: 62 HHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASLS 104
HHPEWFNVYNKVHITLSTHEC GLSERDINLASFIEQVA S++
Sbjct: 185 HHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 313
>emb|Z37525.1|XLXDCOHMR X.laevis XDCoH mRNA
Length = 925
Score = 197 bits (500), Expect = 2e-49
Identities = 93/104 (89%), Positives = 100/104 (95%)
Frame = +2
Query: 1 MAGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKL 60
MAGK HRL+ EEREQLLPNLRAVGW+E++GRDAI KEFHFKDFNRAFGFMTRVALQAEKL
Sbjct: 41 MAGKVHRLSGEEREQLLPNLRAVGWHELDGRDAICKEFHFKDFNRAFGFMTRVALQAEKL 220
Query: 61 DHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASLS 104
DHHPEWFNVY+KVHITLSTH+C GLSERDINLASFIEQ+AASLS
Sbjct: 221 DHHPEWFNVYDKVHITLSTHDCGGLSERDINLASFIEQIAASLS 352
>gb|M83741.1|MUSHOMEOA Mouse cofactor mRNA
Length = 750
Score = 197 bits (500), Expect = 2e-49
Identities = 92/100 (92%), Positives = 98/100 (98%)
Frame = +3
Query: 5 AHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHP 64
+HRL+AEER+QLLPNLRAVGWNEVEGRDAIFK+FHFKDFNRAFGFMTRVALQAEKLDHHP
Sbjct: 6 SHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHP 185
Query: 65 EWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASLS 104
EWFNVYNKVHITLSTHEC GLSERDINLASFIEQVA S++
Sbjct: 186 EWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 305
>dbj|AK012465.1|AK012465 Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:2700061N24:related to HEPATOCYTE
NUCLEAR FACTOR 1A DIMERIZATION COFACTOR ISOFORM, full
insert sequence
Length = 537
Score = 152 bits (385), Expect = 4e-36
Identities = 69/103 (66%), Positives = 88/103 (84%)
Frame = +1
Query: 1 MAGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKL 60
M+ A L AEER+QL+P L+A GW+E+ RDAI+KEF FK+FN+AFGFM+RVALQAEK+
Sbjct: 103 MSSDAQWLTAEERDQLIPGLKAAGWSELSERDAIYKEFSFKNFNQAFGFMSRVALQAEKM 282
Query: 61 DHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASL 103
+HHPEWFNVYNKV ITL++H+C GL++RD+ LA FIE+ AASL
Sbjct: 283 NHHPEWFNVYNKVQITLTSHDCGGLTKRDVKLAQFIEKAAASL 411
>ref|XM_047749.1| Homo sapiens hypothetical protein DKFZp566K1946 (DKFZP566K1946),
mRNA
Length = 5619
Score = 143 bits (360), Expect = 3e-33
Identities = 64/103 (62%), Positives = 85/103 (82%)
Frame = +3
Query: 1 MAGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKL 60
M+ HRL AEER Q + +L+A GW+E+ RDAI+KEF F +FN+AFGFM+RVALQAEK+
Sbjct: 102 MSSGTHRLTAEERNQAILDLKAAGWSELSERDAIYKEFSFHNFNQAFGFMSRVALQAEKM 281
Query: 61 DHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASL 103
+HHPEWFNVYNKV ITL++H+C L+++D+ LA FIE+ AAS+
Sbjct: 282 NHHPEWFNVYNKVQITLTSHDCGELTKKDVKLAKFIEKAAASV 410
>gb|AF190051.1|AF190051 Gallus gallus hepatocyte nuclear factor 1a dimerization cofactor
isoform (DCoH) mRNA, complete cds
Length = 559
Score = 142 bits (359), Expect = 4e-33
Identities = 65/103 (63%), Positives = 87/103 (84%)
Frame = +1
Query: 1 MAGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKL 60
M+ ++H L AEER Q+L +L+A GW+E RDAI+KEF+FK+FN+AFGFMTRVALQAE +
Sbjct: 16 MSSQSHWLTAEERTQVLLDLKASGWSESGERDAIYKEFNFKNFNQAFGFMTRVALQAENM 195
Query: 61 DHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASL 103
+HHPEWFNVY+KV ITL +H+C GL++RD+ LA FI++ AAS+
Sbjct: 196 NHHPEWFNVYSKVQITLISHDCGGLTKRDVKLAQFIDKAAASV 324
>ref|NM_032151.1| Homo sapiens hypothetical protein DKFZp566K1946 (DKFZP566K1946),
mRNA
Length = 5641
Score = 142 bits (357), Expect = 7e-33
Identities = 64/103 (62%), Positives = 85/103 (82%)
Frame = +3
Query: 1 MAGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKL 60
M+ HRL AEER Q + +L+A GW+E+ RDAI+KEF F +FN+AFGFM+RVALQAEK+
Sbjct: 102 MSSGTHRLIAEERNQAILDLKAAGWSELSERDAIYKEFSFHNFNQAFGFMSRVALQAEKM 281
Query: 61 DHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASL 103
+HHPEWFNVYNKV ITL++H+C L+++D+ LA FIE+ AAS+
Sbjct: 282 NHHPEWFNVYNKVQITLTSHDCGELTKKDVKLAKFIEKAAASV 410
>emb|AL136721.1|HSM801689 Homo sapiens mRNA; cDNA DKFZp566K1946 (from clone DKFZp566K1946);
complete cds
Length = 5641
Score = 142 bits (357), Expect = 7e-33
Identities = 64/103 (62%), Positives = 85/103 (82%)
Frame = +3
Query: 1 MAGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKL 60
M+ HRL AEER Q + +L+A GW+E+ RDAI+KEF F +FN+AFGFM+RVALQAEK+
Sbjct: 102 MSSGTHRLIAEERNQAILDLKAAGWSELSERDAIYKEFSFHNFNQAFGFMSRVALQAEKM 281
Query: 61 DHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASL 103
+HHPEWFNVYNKV ITL++H+C L+++D+ LA FIE+ AAS+
Sbjct: 282 NHHPEWFNVYNKVQITLTSHDCGELTKKDVKLAKFIEKAAASV 410
>ref|NM_059581.1| Caenorhabditis elegans
Length = 537
Score = 139 bits (351), Expect = 3e-32
Identities = 64/92 (69%), Positives = 72/92 (77%)
Frame = +1
Query: 8 LNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWF 67
L ER + L L+ GW VEGRDAI KEFHFKDFN AFGFMTRV L+AEK+DHHPEWF
Sbjct: 250 LTESERTEQLSGLKTAGWKLVEGRDAIQKEFHFKDFNEAFGFMTRVGLKAEKMDHHPEWF 429
Query: 68 NVYNKVHITLSTHECTGLSERDINLASFIEQV 99
NVYNKV ITLSTH+C GLS D+ LA+FIE +
Sbjct: 430 NVYNKVDITLSTHDCGGLSPNDVKLATFIESI 525
>ref|NG_000696.1| Drosophila melanogaster pterin-4a-carbinolamine dehydratase (Pcd) on
chromosome 3
Length = 11001
Score = 122 bits (305), Expect = 7e-27
Identities = 58/94 (61%), Positives = 70/94 (73%)
Frame = +3
Query: 7 RLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEW 66
RLN +ER + L L GW VEGRDAIFK+F KDFN+AF FMT VAL AEK++HHPEW
Sbjct: 5685 RLNEQERAEKLQPLLDAGWTLVEGRDAIFKQFVLKDFNQAFSFMTGVALLAEKINHHPEW 5864
Query: 67 FNVYNKVHITLSTHECTGLSERDINLASFIEQVA 100
FN YNKV +TLSTH+ GLS +DI +A+ +E A
Sbjct: 5865 FNCYNKVDVTLSTHDVGGLSSQDIRMATHLETTA 5966
>gb|AF069297.1|AF069297 Drosophila melanogaster pterin-4a-carbinolamine dehydratase gene,
complete cds
Length = 2123
Score = 122 bits (305), Expect = 7e-27
Identities = 58/94 (61%), Positives = 70/94 (73%)
Frame = +1
Query: 7 RLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEW 66
RLN +ER + L L GW VEGRDAIFK+F KDFN+AF FMT VAL AEK++HHPEW
Sbjct: 1636 RLNEQERAEKLQPLLDAGWTLVEGRDAIFKQFVLKDFNQAFSFMTGVALLAEKINHHPEW 1815
Query: 67 FNVYNKVHITLSTHECTGLSERDINLASFIEQVA 100
FN YNKV +TLSTH+ GLS +DI +A+ +E A
Sbjct: 1816 FNCYNKVDVTLSTHDVGGLSSQDIRMATHLETTA 1917
>ref|NM_058012.1| Drosophila melanogaster pterin-4a-carbinolamine dehydratase (Pcd),
transcript variant Pcd-P1|CDS, mRNA
Length = 306
Score = 122 bits (305), Expect = 7e-27
Identities = 58/94 (61%), Positives = 70/94 (73%)
Frame = +1
Query: 7 RLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEW 66
RLN +ER + L L GW VEGRDAIFK+F KDFN+AF FMT VAL AEK++HHPEW
Sbjct: 10 RLNEQERAEKLQPLLDAGWTLVEGRDAIFKQFVLKDFNQAFSFMTGVALLAEKINHHPEW 189
Query: 67 FNVYNKVHITLSTHECTGLSERDINLASFIEQVA 100
FN YNKV +TLSTH+ GLS +DI +A+ +E A
Sbjct: 190 FNCYNKVDVTLSTHDVGGLSSQDIRMATHLETTA 291
>gb|AE003770.1|AE003770 Drosophila melanogaster genomic scaffold 142000013386035 section 95 of
105, complete sequence
Length = 224100
Score = 122 bits (305), Expect = 7e-27
Identities = 58/94 (61%), Positives = 70/94 (73%)
Frame = +3
Query: 7 RLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEW 66
RLN +ER + L L GW VEGRDAIFK+F KDFN+AF FMT VAL AEK++HHPEW
Sbjct: 213954 RLNEQERAEKLQPLLDAGWTLVEGRDAIFKQFVLKDFNQAFSFMTGVALLAEKINHHPEW 214133
Query: 67 FNVYNKVHITLSTHECTGLSERDINLASFIEQVA 100
FN YNKV +TLSTH+ GLS +DI +A+ +E A
Sbjct: 214134 FNCYNKVDVTLSTHDVGGLSSQDIRMATHLETTA 214235
>gb|AC007892.4|AC007892 Drosophila melanogaster, chromosome 3R, region 99B-99B, BAC clone
BACR02O03, complete sequence
Length = 202929
Score = 122 bits (305), Expect = 7e-27
Identities = 58/94 (61%), Positives = 70/94 (73%)
Frame = +3
Query: 7 RLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEW 66
RLN +ER + L L GW VEGRDAIFK+F KDFN+AF FMT VAL AEK++HHPEW
Sbjct: 78684 RLNEQERAEKLQPLLDAGWTLVEGRDAIFKQFVLKDFNQAFSFMTGVALLAEKINHHPEW 78863
Query: 67 FNVYNKVHITLSTHECTGLSERDINLASFIEQVA 100
FN YNKV +TLSTH+ GLS +DI +A+ +E A
Sbjct: 78864 FNCYNKVDVTLSTHDVGGLSSQDIRMATHLETTA 78965
>gb|AF382144.1|AF382144 Drosophila virilis pterin 4alpha-carbinolamine dehydratase gene,
complete cds
Length = 1748
Score = 121 bits (304), Expect = 9e-27
Identities = 58/97 (59%), Positives = 73/97 (74%)
Frame = +2
Query: 7 RLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEW 66
+L +ER + L L GW VEGRDAI+KEF FKDFN+AF FMT VAL AEK++HHPEW
Sbjct: 1274 KLTEQERVEKLQPLLDAGWCLVEGRDAIYKEFLFKDFNQAFSFMTGVALLAEKMNHHPEW 1453
Query: 67 FNVYNKVHITLSTHECTGLSERDINLASFIEQVAASL 103
FNVYNK+ +TLSTH+ GLS +DI +A+++E A L
Sbjct: 1454 FNVYNKLQVTLSTHDVGGLSSQDIRMATYLETQAKLL 1564
>emb|AL646074.1|AL646074 Ralstonia solanacearum GMI1000 chromosome, complete sequence; segment
18/19
Length = 220050
Score = 115 bits (288), Expect = 7e-25
Identities = 57/93 (61%), Positives = 69/93 (73%)
Frame = +2
Query: 8 LNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWF 67
LN E+R+ L L GW+ RDAI K F F DFN AFGFMTRVAL+AE+++HHPEWF
Sbjct: 212540 LNDEQRKALFAELP--GWSLQNDRDAIHKRFTFTDFNAAFGFMTRVALKAEQVNHHPEWF 212713
Query: 68 NVYNKVHITLSTHECTGLSERDINLASFIEQVA 100
NV+N+V ITLSTH+ GL+ RD +LA FIEQ A
Sbjct: 212714 NVWNRVDITLSTHDANGLTHRDADLARFIEQAA 212812
>gb|AE009620.1|AE009620 Brucella melitensis strain 16M chromosome I, section 177 of 195 of
the complete sequence
Length = 11751
Score = 103 bits (256), Expect = 3e-21
Identities = 49/95 (51%), Positives = 65/95 (67%)
Frame = +1
Query: 6 HRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPE 65
+RL E + L L GW +V+GR+AI + F FKDF+ AFGFM + AL AEKLDHHPE
Sbjct: 2278 NRLTESEMNEALRALD--GWQKVDGREAITRSFKFKDFSTAFGFMAQAALYAEKLDHHPE 2451
Query: 66 WFNVYNKVHITLSTHECTGLSERDINLASFIEQVA 100
WFN YN+V +TL+TH G++E DI +A + +A
Sbjct: 2452 WFNAYNRVDVTLATHSENGVTELDIKMARKMNAIA 2556
>gb|AE005698.1|AE005698 Caulobacter crescentus section 24 of 359 of the complete genome
Length = 11036
Score = 101 bits (251), Expect = 1e-20
Identities = 43/70 (61%), Positives = 56/70 (79%)
Frame = +1
Query: 31 RDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECTGLSERDI 90
+DAI K F F DFN+AFGFMTRVAL A+KLDHHPEWFNVYN+V + L+TH+ G+++ D+
Sbjct: 1606 KDAIVKTFRFDDFNQAFGFMTRVALMADKLDHHPEWFNVYNRVEVLLTTHDADGVTDLDL 1785
Query: 91 NLASFIEQVA 100
LA F++ A
Sbjct: 1786 TLAKFMDSAA 1815
>emb|AL009227.1|SPAC27D7 S.pombe chromosome I cosmid c27D7
Length = 35892
Score = 97.1 bits (240), Expect = 2e-19
Identities = 46/97 (47%), Positives = 65/97 (66%)
Frame = +1
Query: 4 KAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHH 63
K ++N R L + W +G +FK F FK+F A+GFM+ VAL+A++L+HH
Sbjct: 12136 KVEKMNTSARLLALVSKSKNNWILQQGDTKLFKSFRFKNFIEAWGFMSCVALRAQQLNHH 12315
Query: 64 PEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVA 100
PEW NVYNKV ITL+TH+ GL+E+D+ LA FI+ +A
Sbjct: 12316 PEWTNVYNKVDITLTTHDTKGLTEKDLKLAEFIDTLA 12426
>emb|AJ005158.1|GGAJ5158 Gallus gallus DCoH gene, complete CDS
Length = 12339
Score = 95.1 bits (235), Expect = 9e-19
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 2 AGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNR 45
AGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNR
Sbjct: 4848 AGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNR 4979
Score = 66.6 bits (161), Expect = 4e-10
Identities = 30/37 (81%), Positives = 31/37 (83%)
Frame = +3
Query: 37 EFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKV 73
E F +AFGFMTRVALQAEKLDHHPEWFNVYNKV
Sbjct: 5307 ELTFYSTEQAFGFMTRVALQAEKLDHHPEWFNVYNKV 5417
Score = 65.1 bits (157), Expect = 1e-09
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +3
Query: 73 VHITLSTHECTGLSERDINLASFIEQVAASLS 104
VHITLSTHECTGLSERDINLASFIEQVAASLS
Sbjct: 5946 VHITLSTHECTGLSERDINLASFIEQVAASLS 6041
>gb|AF098993.1|CELT10B11 Caenorhabditis elegans cosmid T10B11
Length = 32314
Score = 94.7 bits (234), Expect = 1e-18
Identities = 43/62 (69%), Positives = 49/62 (78%)
Frame = +1
Query: 38 FHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIE 97
F F AFGFMTRV L+AEK+DHHPEWFNVYNKV ITLSTH+C GLS D+ LA+FIE
Sbjct: 26782 FILNSFF*AFGFMTRVGLKAEKMDHHPEWFNVYNKVDITLSTHDCGGLSPNDVKLATFIE 26961
Query: 98 QV 99
+
Sbjct: 26962 SI 26967
Score = 53.1 bits (126), Expect = 4e-06
Identities = 24/42 (57%), Positives = 27/42 (64%)
Frame = +2
Query: 8 LNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGF 49
L ER + L L+ GW VEGRDAI KEFHFKDFN F +
Sbjct: 26642 LTESERTEQLSGLKTAGWKLVEGRDAIQKEFHFKDFNEVFKY 26767
>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12
Length = 273785
Score = 94.0 bits (232), Expect = 2e-18
Identities = 44/77 (57%), Positives = 54/77 (69%)
Frame = -1
Query: 24 GWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECT 83
GW E +I+K F FK F AF FMT+ A AEKL+HHPEWFNVYNKV +TLSTH+
Sbjct: 120620 GWVLAEDGGSIWKTFRFKTFAEAFTFMTQCAFAAEKLNHHPEWFNVYNKVDVTLSTHDAD 120441
Query: 84 GLSERDINLASFIEQVA 100
GL+E D LA+ ++Q A
Sbjct: 120440 GLTELDFKLAAKMDQAA 120390
>gb|AF168787.1|AF168787 Homo sapiens vanilloid receptor gene, partial sequence; CARKL and CTNS
genes, complete cds; TIP1 gene, partial cds; P2X5b and
P2X5a genes, complete cds; and HUMINAE gene, partial cds
Length = 200237
Score = 91.7 bits (226), Expect = 1e-17
Identities = 41/61 (67%), Positives = 53/61 (86%)
Frame = -2
Query: 43 FNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAAS 102
FN+AFGFM+RVALQAEK++HHPEWFNV NKV ITL++ C GL +RD+ LA+FIE+ A+S
Sbjct: 54757 FNQAFGFMSRVALQAEKMNHHPEWFNV*NKVQITLTSRNCGGLIKRDVKLATFIEKAASS 54578
Query: 103 L 103
+
Sbjct: 54577 V 54575
Score = 36.2 bits (82), Expect = 0.52
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -1
Query: 1 MAGKAHRLNAEEREQLLPNLRAVGWNEVEGRD 32
M AHR AEER Q + NL+A GW+E+ R+
Sbjct: 55193 MLSGAHR*TAEERNQAILNLKAAGWSELSERE 55098
>emb|AJ005542.1|RNA005542 Rattus norvegicus DCoH gene
Length = 9392
Score = 91.3 bits (225), Expect = 1e-17
Identities = 41/47 (87%), Positives = 45/47 (95%)
Frame = +2
Query: 2 AGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFG 48
AGKAHRL+AEER+QLLPNLRAVGWNE+EGRDAIFK+FHFKDFNR G
Sbjct: 4973 AGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRVCG 5113
Score = 66.2 bits (160), Expect = 5e-10
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +1
Query: 43 FNRAFGFMTRVALQAEKLDHHPEWFNVYNKV 73
F +AFGFMTRVALQAEKLDHHPEWFNVYNKV
Sbjct: 5488 FYQAFGFMTRVALQAEKLDHHPEWFNVYNKV 5580
Score = 60.1 bits (144), Expect = 3e-08
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +2
Query: 72 KVHITLSTHECTGLSERDINLASFIEQVAASLS 104
+VHITLSTHEC GLSERDINLASFIEQVA S++
Sbjct: 7097 QVHITLSTHECAGLSERDINLASFIEQVAVSMT 7195
>gb|L41560.1|HUMPCBD Homo sapiens (clones HGPCD2 and HGPCD15) pterin-4a-carbinolamine
dehydratase (PCBD) gene, complete cds
Length = 12404
Score = 90.1 bits (222), Expect = 3e-17
Identities = 40/46 (86%), Positives = 45/46 (96%)
Frame = +2
Query: 2 AGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAF 47
AGKAHRL+AEER+QLLPNLRAVGWNE+EGRDAIFK+FHFKDFNR +
Sbjct: 7292 AGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRVW 7429
Score = 64.3 bits (155), Expect = 2e-09
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 46 AFGFMTRVALQAEKLDHHPEWFNVYNKV 73
AFGFMTRVALQAEKLDHHPEWFNVYNKV
Sbjct: 7989 AFGFMTRVALQAEKLDHHPEWFNVYNKV 8072
Score = 60.8 bits (146), Expect = 2e-08
Identities = 30/38 (78%), Positives = 33/38 (85%)
Frame = +1
Query: 67 FNVYNKVHITLSTHECTGLSERDINLASFIEQVAASLS 104
F V +VHITLSTHEC GLSERDINLASFIEQVA S++
Sbjct: 9154 FLVSFQVHITLSTHECAGLSERDINLASFIEQVAVSMT 9267
>gb|L15410.1|HUMCDHA Human 4a-carbinolamine dehydratase gene, partial cds
Length = 271
Score = 88.6 bits (218), Expect = 9e-17
Identities = 39/45 (86%), Positives = 44/45 (97%)
Frame = +2
Query: 3 GKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAF 47
GKAHRL+AEER+QLLPNLRAVGWNE+EGRDAIFK+FHFKDFNR +
Sbjct: 2 GKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRVW 136
>gb|AE008181.1|AE008181 Agrobacterium tumefaciens str. C58 circular chromosome, section 239
of 254 of the complete sequence
Length = 11754
Score = 85.9 bits (211), Expect = 6e-16
Identities = 45/98 (45%), Positives = 59/98 (59%)
Frame = -1
Query: 4 KAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHH 63
K RL + Q L L GW+ E AI + F F F AFGFM AL AEKL+HH
Sbjct: 930 KYPRLEPDAIRQALSKLE--GWSLREDGAAIVRSFKFSSFAEAFGFMAESALAAEKLNHH 757
Query: 64 PEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAA 101
PEW NVY++V + L+TH+ G++ERD LA +++ AA
Sbjct: 756 PEWSNVYSRVKVCLTTHDSQGVTERDFLLAEAMQKAAA 643
>gb|AE009214.1|AE009214 Agrobacterium tumefaciens strain C58 circular chromosome, section 240
of 256 of the complete sequence
Length = 10359
Score = 85.9 bits (211), Expect = 6e-16
Identities = 45/98 (45%), Positives = 59/98 (59%)
Frame = -3
Query: 4 KAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHH 63
K RL + Q L L GW+ E AI + F F F AFGFM AL AEKL+HH
Sbjct: 4120 KYPRLEPDAIRQALSKLE--GWSLREDGAAIVRSFKFSSFAEAFGFMAESALAAEKLNHH 3947
Query: 64 PEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAA 101
PEW NVY++V + L+TH+ G++ERD LA +++ AA
Sbjct: 3946 PEWSNVYSRVKVCLTTHDSQGVTERDFLLAEAMQKAAA 3833
>gb|AC078911.11| Mus musculus Strain C57BL6/J Chromosome 2 RP23-111A22, complete
sequence
Length = 200329
Score = 55.5 bits (132), Expect(2) = 3e-15
Identities = 29/49 (59%), Positives = 35/49 (71%)
Frame = -2
Query: 6 HRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVA 54
+RL+AE +EQ LPN RAVG E+EG K+FHFKDF+ FGFM R A
Sbjct: 64452 NRLSAEGQEQQLPNCRAVGRKELEG----CKQFHFKDFSGTFGFMAREA 64318
Score = 48.5 bits (114), Expect(2) = 3e-15
Identities = 24/44 (54%), Positives = 31/44 (69%)
Frame = -3
Query: 58 EKLDHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAA 101
E+LDH +W NV+ K HI L++H+ LSE DINL FI +VAA
Sbjct: 64325 ERLDHRLQWLNVH-KAHIPLNSHKPGSLSELDINLTGFITKVAA 64197
>dbj|D90909.1|D90909 Synechocystis sp. PCC 6803 DNA, complete genome, section:11/27,
1311235-1430418
Length = 119184
Score = 81.6 bits (200), Expect = 1e-14
Identities = 37/71 (52%), Positives = 55/71 (77%)
Frame = -3
Query: 24 GWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECT 83
GW+ ++G + + ++F F +FN+AFGFMTR+AL AE L+HHPEW NVYN+V I L+TH+
Sbjct: 82612 GWS-LQG-NKLHRQFKFANFNQAFGFMTRLALVAETLNHHPEWSNVYNRVTIDLTTHDAG 82439
Query: 84 GLSERDINLAS 94
G++E D+ A+
Sbjct: 82438 GITELDVKFAT 82406
>dbj|AP003003.2|AP003003 Mesorhizobium loti DNA, complete genome, section 10/21
Length = 349116
Score = 77.8 bits (190), Expect = 2e-13
Identities = 35/69 (50%), Positives = 48/69 (68%)
Frame = +1
Query: 25 WNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECTG 84
W+ +I + F F++F+ AF FMTRVAL AEK+DHHP+W NVY V +TL+TH+ G
Sbjct: 348382 WSLATDGASIKRSFVFRNFSEAFAFMTRVALAAEKMDHHPDWSNVYKTVDVTLNTHDAGG 348561
Query: 85 LSERDINLA 93
++ DI LA
Sbjct: 348562 VTALDIALA 348588
>gb|AE006824.1|AE006824 Sulfolobus solfataricus section 183 of 272 of the complete genome
Length = 13389
Score = 64.3 bits (155), Expect = 2e-09
Identities = 31/83 (37%), Positives = 49/83 (58%)
Frame = +2
Query: 17 LPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHIT 76
L L+ GW +E I KEF FKDF ++ F+ + A+ LDHHP+ YN+V +
Sbjct: 10508 LEELKINGWIVLENGKKIKKEFRFKDFKQSVDFLKDIQPSADALDHHPDVCVYYNRVVVE 10687
Query: 77 LSTHECTGLSERDINLASFIEQV 99
L+TH+ GL++ D LA ++++
Sbjct: 10688 LTTHDVGGLTDLDYKLAIKLDEL 10756
>gb|L15427.1|HUMCDHB Human 4a-carbinolamine dehydratase gene, partial cds
Length = 285
Score = 62.8 bits (151), Expect = 5e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +1
Query: 46 AFGFMTRVALQAEKLDHHPEWFNVYNK 72
AFGFMTRVALQAEKLDHHPEWFNVYNK
Sbjct: 205 AFGFMTRVALQAEKLDHHPEWFNVYNK 285
>gb|AC008670.5| Homo sapiens chromosome 5 clone CTB-36O1, complete sequence
Length = 132755
Score = 60.5 bits (145), Expect = 3e-08
Identities = 25/29 (86%), Positives = 29/29 (99%)
Frame = -1
Query: 45 RAFGFMTRVALQAEKLDHHPEWFNVYNKV 73
+AFGFM+RVALQAEK++HHPEWFNVYNKV
Sbjct: 51218 QAFGFMSRVALQAEKMNHHPEWFNVYNKV 51132
Score = 53.9 bits (128), Expect = 2e-06
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = -1
Query: 6 HRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNR 45
HRL AEER Q + +L+A GW+E+ RDAI+KEF F +FN+
Sbjct: 99908 HRLTAEERNQAILDLKAAGWSELSERDAIYKEFSFHNFNQ 99789
Score = 38.5 bits (88), Expect = 0.10
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = -2
Query: 73 VHITLSTHECTGLSERDINLASFIEQVAASL 103
V ITL++H+C L+++D+ LA FIE+ AAS+
Sbjct: 49669 VQITLTSHDCGELTKKDVKLAKFIEKAAASV 49577
>gb|AC001555.1|HSAC001555 Homo sapiens (subclone 1_d8 from BAC H75) DNA sequence, complete
sequence
Length = 4481
Score = 60.5 bits (145), Expect = 3e-08
Identities = 25/29 (86%), Positives = 29/29 (99%)
Frame = -1
Query: 45 RAFGFMTRVALQAEKLDHHPEWFNVYNKV 73
+AFGFM+RVALQAEK++HHPEWFNVYNKV
Sbjct: 2588 QAFGFMSRVALQAEKMNHHPEWFNVYNKV 2502
Score = 38.5 bits (88), Expect = 0.10
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = -2
Query: 73 VHITLSTHECTGLSERDINLASFIEQVAASL 103
V ITL++H+C L+++D+ LA FIE+ AAS+
Sbjct: 1039 VQITLTSHDCGELTKKDVKLAKFIEKAAASV 947
>gb|L15428.1|HUMCDHC Human 4a-carbinolamine dehydratase gene, 3' end of cds
Length = 139
Score = 59.7 bits (143), Expect = 4e-08
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +3
Query: 73 VHITLSTHECTGLSERDINLASFIEQVAASLS 104
VHITLSTHEC GLSERDINLASFIEQVA S++
Sbjct: 30 VHITLSTHECAGLSERDINLASFIEQVAVSMT 125
>dbj|AP003596.1|AP003596 Nostoc sp. PCC 7120 DNA, complete genome, section 16/19
Length = 348550
Score = 57.0 bits (136), Expect = 3e-07
Identities = 25/60 (41%), Positives = 39/60 (64%)
Frame = +2
Query: 40 FKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQV 99
FKDF A F+ ++ AE HHP+ YNKV +TL+TH+ GL+++D ++A+ I Q+
Sbjct: 300410 FKDFIEAIAFVNKLVEPAESAGHHPDIEISYNKVKVTLTTHDAGGLTQKDFDVAATISQI 300589
>dbj|AP000989.1|AP000989 Sulfolobus tokodaii genomic DNA, complete sequence, section:9/10
Length = 277050
Score = 56.2 bits (134), Expect = 5e-07
Identities = 28/76 (36%), Positives = 48/76 (62%)
Frame = -1
Query: 24 GWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECT 83
GW+ ++G + I K F F DF A F+ +V A+ ++HHP+ YNKV + L+TH+
Sbjct: 28896 GWS-LKG-NVIEKTFLFHDFKEAVNFLNKVQPIADSMNHHPDVCIYYNKVIVQLTTHDAG 28723
Query: 84 GLSERDINLASFIEQV 99
G+++ D+ LA I+++
Sbjct: 28722 GITDLDVELAKKIDEL 28675
>gb|L04537.1|RAT4ACRDHY Rat 4a-hydroxytetrahydrobiopterin dehydratase mRNA, partial cds
Length = 76
Score = 55.8 bits (133), Expect = 6e-07
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = +2
Query: 21 RAVGWNEVEGRDAIFKEFHFKDFNR 45
RAVGWNE+EGRDAIFK+FHFKDFNR
Sbjct: 2 RAVGWNELEGRDAIFKQFHFKDFNR 76
>gb|AE000671.1|AE000671 Aquifex aeolicus section 3 of 109 of the complete genome
Length = 13276
Score = 55.8 bits (133), Expect = 6e-07
Identities = 34/97 (35%), Positives = 53/97 (54%)
Frame = +1
Query: 7 RLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEW 66
+L+ EE ++ L NL GW +D I KEF K++ + +A AE HHP+
Sbjct: 3970 KLSEEEVKRELENLE--GWEFC--KDYIQKEFSTKNWKTTIFVVNAIASLAEAQWHHPDL 4137
Query: 67 FNVYNKVHITLSTHECTGLSERDINLASFIEQVAASL 103
+ KV + L+THE G++ERDI LA I+++ +
Sbjct: 4138 EVSFKKVKVKLTTHEAGGITERDIKLAKSIDELVKEI 4248
>gb|L81893.1|HSL81893 Homo sapiens (subclone 2_e10 from P1 H62) DNA sequence, complete
sequence
Length = 3490
Score = 53.9 bits (128), Expect = 2e-06
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = -1
Query: 6 HRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNR 45
HRL AEER Q + +L+A GW+E+ RDAI+KEF F +FN+
Sbjct: 292 HRLTAEERNQAILDLKAAGWSELSERDAIYKEFSFHNFNQ 173
>gb|AC006077.1|AC006077 Homo sapiens chromosome 5, P1 clone 254f11 (LBNL H62), complete
sequence
Length = 87424
Score = 53.9 bits (128), Expect = 2e-06
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1
Query: 6 HRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNR 45
HRL AEER Q + +L+A GW+E+ RDAI+KEF F +FN+
Sbjct: 77509 HRLTAEERNQAILDLKAAGWSELSERDAIYKEFSFHNFNQ 77628
>gb|AE004067.1|AE004067 Xylella fastidiosa 9a5c, section 213 of 229 of the complete genome
Length = 12757
Score = 52.0 bits (123), Expect = 9e-06
Identities = 28/91 (30%), Positives = 43/91 (46%)
Frame = +1
Query: 4 KAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHH 63
K H+L +LLP + GW A+ + F F ++ R F+ +A A DHH
Sbjct: 6589 KEHKLGQARLAELLPQVP--GWELSNNGHALTRTFRFDNYYRTLAFVNALAFIAHCEDHH 6762
Query: 64 PEWFNVYNKVHITLSTHECTGLSERDINLAS 94
P+ Y + + STH+ G+SE D A+
Sbjct: 6763 PDMSVHYGRAVVCFSTHKIGGISENDFICAA 6855
>dbj|AB047767.1|AB047767 Meloidogyne arenaria DNA, polymorphic marker for virulence,
isolate:MAMG-AV
Length = 1316
Score = 47.4 bits (111), Expect = 2e-04
Identities = 22/69 (31%), Positives = 36/69 (51%)
Frame = +3
Query: 33 AIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECTGLSERDINL 92
AI K +HF ++ F+ +A A DHHP+ YN+ + L+TH+ G+S D
Sbjct: 798 AIEKTYHFANYYETISFVNALAFIANAQDHHPDLSVHYNRCVVRLNTHDVHGISSTDFEC 977
Query: 93 ASFIEQVAA 101
A+ + + A
Sbjct: 978 ATQFDALVA 1004
>dbj|AB047765.1|AB047765 Meloidogyne incognita DNA, polymorphic marker for virulence,
isolate:MIIK-AV
Length = 1316
Score = 47.4 bits (111), Expect = 2e-04
Identities = 22/69 (31%), Positives = 36/69 (51%)
Frame = +3
Query: 33 AIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECTGLSERDINL 92
AI K +HF ++ F+ +A A DHHP+ YN+ + L+TH+ G+S D
Sbjct: 798 AIEKTYHFANYYETISFVNALAFIANAQDHHPDLSVHYNRCVVRLNTHDVHGISSTDFEC 977
Query: 93 ASFIEQVAA 101
A+ + + A
Sbjct: 978 ATQFDALVA 1004
>dbj|AB047764.1|AB047764 Meloidogyne incognita DNA, polymorphic marker for virulence,
isolate:MIGD-VI
Length = 1316
Score = 47.4 bits (111), Expect = 2e-04
Identities = 22/69 (31%), Positives = 36/69 (51%)
Frame = +3
Query: 33 AIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECTGLSERDINL 92
AI K +HF ++ F+ +A A DHHP+ YN+ + L+TH+ G+S D
Sbjct: 798 AIEKTYHFANYYETISFVNALAFIANAQDHHPDLSVHYNRCVVRLNTHDVHGISSTDFEC 977
Query: 93 ASFIEQVAA 101
A+ + + A
Sbjct: 978 ATQFDALVA 1004
>dbj|AB047763.1|AB047763 Meloidogyne arenaria DNA, polymorphic marker for virulence,
isolate:MAYG-VI
Length = 1316
Score = 47.4 bits (111), Expect = 2e-04
Identities = 22/69 (31%), Positives = 36/69 (51%)
Frame = +3
Query: 33 AIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECTGLSERDINL 92
AI K +HF ++ F+ +A A DHHP+ YN+ + L+TH+ G+S D
Sbjct: 798 AIEKTYHFANYYETISFVNALAFIANAQDHHPDLSVHYNRCVVRLNTHDVHGISSTDFEC 977
Query: 93 ASFIEQVAA 101
A+ + + A
Sbjct: 978 ATQFDALVA 1004
>dbj|AB047762.1|AB047762 Meloidogyne javanica DNA, polymorphic marker for virulence,
isolate:MJON-VI
Length = 1316
Score = 47.4 bits (111), Expect = 2e-04
Identities = 22/69 (31%), Positives = 36/69 (51%)
Frame = +3
Query: 33 AIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECTGLSERDINL 92
AI K +HF ++ F+ +A A DHHP+ YN+ + L+TH+ G+S D
Sbjct: 798 AIEKTYHFANYYETISFVNALAFIANAQDHHPDLSVHYNRCVVRLNTHDVHGISSTDFEC 977
Query: 93 ASFIEQVAA 101
A+ + + A
Sbjct: 978 ATQFDALVA 1004
>dbj|AB047766.1|AB047766 Meloidogyne javanica DNA, polymorphic marker for virulence,
isolate:MJON-AV
Length = 1330
Score = 45.4 bits (106), Expect = 9e-04
Identities = 21/69 (30%), Positives = 36/69 (51%)
Frame = +3
Query: 33 AIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECTGLSERDINL 92
AI K +HF ++ F+ +A A DHHP+ Y++ + L+TH+ G+S D
Sbjct: 798 AIEKTYHFANYYETISFVNALAFIANAQDHHPDLSVHYSRCVVRLNTHDVHGISSTDFEC 977
Query: 93 ASFIEQVAA 101
A+ + + A
Sbjct: 978 ATQFDALVA 1004
>ref|NM_102721.1| Arabidopsis thaliana chromosome 1 CHR1v12152001 genomic sequence
Length = 447
Score = 45.1 bits (105), Expect = 0.001
Identities = 27/82 (32%), Positives = 40/82 (47%), Gaps = 3/82 (3%)
Frame = +1
Query: 21 RAVGWNEVEGRDAI--FKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNV-YNKVHITL 77
+ GW+ D + + + K F + F RVA AE HHP+ V +N V I +
Sbjct: 160 KVAGWDLANDNDTLKLHRSWRVKSFTKGLDFFQRVADIAESEGHHPDLHLVGWNNVKIEI 339
Query: 78 STHECTGLSERDINLASFIEQV 99
TH GL+E D LA+ I ++
Sbjct: 340 WTHAIGGLTENDFILAAKINEL 405
>emb|AL583922.1|MLEPRTN6 Mycobacterium leprae strain TN complete genome; segment 6/10
Length = 318200
Score = 43.1 bits (100), Expect = 0.004
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +2
Query: 25 WNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECTG 84
W +G A+ + F F + RVA AE DHHP+ Y V L TH G
Sbjct: 134345 WKHTDG--ALCRSIKFPTFLAGIDAVCRVAEHAETKDHHPDIDIRYRTVTFILVTHYADG 134518
Query: 85 LSERDINLASFIEQV 99
++++DI +A I+++
Sbjct: 134519 ITKKDITMARDIDRL 134563
>dbj|AB047761.1|AB047761 Meloidogyne incognita DNA, polymorphic marker for virulence,
isolate:MINN-VI
Length = 1316
Score = 42.7 bits (99), Expect = 0.006
Identities = 19/62 (30%), Positives = 32/62 (50%)
Frame = +3
Query: 33 AIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECTGLSERDINL 92
AI K +HF ++ F+ +A A DHHP+ YN+ + +TH+ G++ D
Sbjct: 798 AIEKTYHFANYYETISFVNALAFVANAQDHHPDLSVHYNRCVVRPNTHDVHGITSTDFEC 977
Query: 93 AS 94
A+
Sbjct: 978 AT 983
>emb|AL031515.1|SC5C7 Streptomyces coelicolor cosmid 5C7
Length = 41906
Score = 42.4 bits (98), Expect = 0.007
Identities = 30/98 (30%), Positives = 49/98 (49%), Gaps = 1/98 (1%)
Frame = +2
Query: 5 AHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHP 64
A L+ +E E+ L L GW+ GR + + + A + VA E+LDHH
Sbjct: 27587 AEPLSPQEVEERLATLP--GWSLDAGR--LTRSYRLGSHFAAAAMVVHVAQVQEELDHHS 27754
Query: 65 EWFNVYNKVHITLSTHECTG-LSERDINLASFIEQVAA 101
+ Y+ V + + TH G ++E+D+ LA +E +AA
Sbjct: 27755 DLTLGYHTVALAVHTHSAGGAVTEKDVELARRVEDLAA 27868
>gb|AE005081.1|AE005081 Halobacterium sp. NRC-1 section 112 of 170 of the complete genome
Length = 19293
Score = 42.0 bits (97), Expect = 0.009
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = -3
Query: 32 DAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECTGLSERDIN 91
DAI + + F+++ F + V A++ HHPE Y++V + + HE G++ +DI
Sbjct: 6085 DAITRTYTFEEYLDGVAFASEVGDLADEAFHHPEITIRYDEVEVRFTDHEAGGVTSQDIE 5906
Query: 92 LA 93
LA
Sbjct: 5905 LA 5900
>gb|U11582.1|YSCH9433 Saccharomyces cerevisiae chromosome VIII cosmid 9433
Length = 29276
Score = 40.4 bits (93), Expect = 0.028
Identities = 22/71 (30%), Positives = 37/71 (51%), Gaps = 7/71 (9%)
Frame = +2
Query: 34 IFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHEC-------TGLS 86
I +E FKD+ + F+TRV++++ HHP Y V + L TH+ + LS
Sbjct: 15254 ITREVTFKDYETTWAFLTRVSMRSHLWGHHPLIHTSYTWVKLELHTHDIDPKDGAHSQLS 15433
Query: 87 ERDINLASFIE 97
+ D+ +A I+
Sbjct: 15434 DIDVRMAKRID 15466
>emb|Z95584.1|MTCI65 Mycobacterium tuberculosis H37Rv complete genome; segment 50/162
Length = 34331
Score = 40.0 bits (92), Expect = 0.036
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = -1
Query: 24 GWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECT 83
GW G + + F F + RVA +AE+++HHP+ + V L TH
Sbjct: 24716 GWQRAGG--VLRRSIKFPTFMAGIDAVRRVAERAEEVNHHPDIDIRWRTVTFALVTHAVG 24543
Query: 84 GLSERDINLASFIE 97
G++E DI +A I+
Sbjct: 24542 GITENDIAMAHDID 24501
>gb|AD000020.1|MSGY348 Mycobacterium tuberculosis sequence from clone y348
Length = 40056
Score = 40.0 bits (92), Expect = 0.036
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = -3
Query: 24 GWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECT 83
GW G + + F F + RVA +AE+++HHP+ + V L TH
Sbjct: 18037 GWQRAGG--VLRRSIKFPTFMAGIDAVRRVAERAEEVNHHPDIDIRWRTVTFALVTHAVG 17864
Query: 84 GLSERDINLASFIE 97
G++E DI +A I+
Sbjct: 17863 GITENDIAMAHDID 17822
>gb|AE006997.1|AE006997 Mycobacterium tuberculosis CDC1551, section 83 of 280 of the
complete genome
Length = 14210
Score = 40.0 bits (92), Expect = 0.036
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = -1
Query: 24 GWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECT 83
GW G + + F F + RVA +AE+++HHP+ + V L TH
Sbjct: 4595 GWQRAGG--VLRRSIKFPTFMAGIDAVRRVAERAEEVNHHPDIDIRWRTVTFALVTHAVG 4422
Query: 84 GLSERDINLASFIE 97
G++E DI +A I+
Sbjct: 4421 GITENDIAMAHDID 4380
>gb|AC073641.3| Homo sapiens BAC clone RP11-368E14 from 2, complete sequence
Length = 197709
Score = 39.3 bits (90), Expect = 0.061
Identities = 21/43 (48%), Positives = 26/43 (59%), Gaps = 1/43 (2%)
Frame = +1
Query: 59 KLDHHPEWFNVYNKVHIT-LSTHECTGLSERDINLASFIEQVA 100
K++HHPEWFNV NKV T LS T +D+ L FI + A
Sbjct: 95602 KMNHHPEWFNVNNKVRPT*LSPCTLTMN*PKDVTLIQFIAKAA 95730
>gb|L81892.1|HSL81892 Homo sapiens (subclone 2_h6 from P1 H62) DNA sequence, complete
sequence
Length = 3294
Score = 38.9 bits (89), Expect = 0.080
Identities = 15/27 (55%), Positives = 22/27 (80%)
Frame = -1
Query: 19 NLRAVGWNEVEGRDAIFKEFHFKDFNR 45
+L+A GW+E+ RDAI+KEF F +FN+
Sbjct: 3294 DLKAAGWSELSERDAIYKEFSFHNFNQ 3214
>emb|Z95150.1|MTCY164 Mycobacterium tuberculosis H37Rv complete genome; segment 135/162
Length = 39150
Score = 38.5 bits (88), Expect = 0.10
Identities = 25/81 (30%), Positives = 46/81 (55%), Gaps = 2/81 (2%)
Frame = +2
Query: 24 GWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNK--VHITLSTHE 81
GW ++ R + + F +F+++ FM RVA A ++HHP+ V +K V +T T +
Sbjct: 21611 GWQLLDMR--LSRAFQCTNFDQSIDFMNRVASIANDINHHPD-IAVLDKRSVRVTAWTRK 21781
Query: 82 CTGLSERDINLASFIEQVAAS 102
L++ D +LA+ +E + A+
Sbjct: 21782 LGYLTDIDFDLAASVEAMYAT 21844
>gb|AE007135.1|AE007135 Mycobacterium tuberculosis CDC1551, section 221 of 280 of the complete
genome
Length = 15576
Score = 38.5 bits (88), Expect = 0.10
Identities = 25/81 (30%), Positives = 46/81 (55%), Gaps = 2/81 (2%)
Frame = +3
Query: 24 GWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNK--VHITLSTHE 81
GW ++ R + + F +F+++ FM RVA A ++HHP+ V +K V +T T +
Sbjct: 14448 GWQLLDMR--LSRAFQCTNFDQSIDFMNRVASIANDINHHPD-IAVLDKRSVRVTAWTRK 14618
Query: 82 CTGLSERDINLASFIEQVAAS 102
L++ D +LA+ +E + A+
Sbjct: 14619 LGYLTDIDFDLAASVEAMYAT 14681
>gb|AE009890.1|AE009890 Pyrobaculum aerophilum strain IM2 section 145 of 201 of the complete
genome
Length = 12288
Score = 36.2 bits (82), Expect = 0.52
Identities = 21/64 (32%), Positives = 38/64 (58%), Gaps = 1/64 (1%)
Frame = +1
Query: 40 FKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHEC-TGLSERDINLASFIEQ 98
FK++ A F+ +A AE+L HHP+ Y + + L+TH+ +++RD+ LA I++
Sbjct: 8500 FKNYLDAVKFLGDLAQIAERLGHHPDVELKYVNLVLKLTTHDAGNRVTDRDLALAREIDR 8679
Query: 99 VAAS 102
+ S
Sbjct: 8680 LVES 8691
>gb|U72662.1|MEU72662 Methylobacterium extorquens methylotrophy region containing malyl-CoA
lyase (mclA), putative ABC transporter subunit A (abcA),
putative ABC transporter subunit B (abcB), putative ABC
transporter ATP-binding subunit (abcC), methanol
dyhydrogenase large >
Length = 15807
Score = 35.4 bits (80), Expect = 0.89
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3
Query: 57 AEKLDHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQV 99
AE HHP+ Y V + L H G++E+D +LA IE+V
Sbjct: 3895 AEAAWHHPDLTASYAWVEVRLMNHAAKGITEKDFSLAKKIEEV 3767
>dbj|AP003570.3|AP003570 Oryza sativa genomic DNA, chromosome 1, PAC clone:P0432B10, complete
sequence
Length = 131918
Score = 32.3 bits (72), Expect = 7.5
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -3
Query: 44 NRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECTGLSERDINLA 93
NRA V L+ EK+ H + N YN+V I CT + +R + LA
Sbjct: 64737 NRAITTRHIVILKTEKVTVHDNYCNHYNRVVIVRFCKSCTEMFQRGLKLA 64588
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 19, 2002 12:00 AM
Number of letters in database: 587,334,133
Number of sequences in database: 1,164,257
Lambda K H
0.321 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 584,687,932
Number of Sequences: 1164257
Number of extensions: 7276436
Number of successful extensions: 29573
Number of sequences better than 10.0: 146
Number of HSP's better than 10.0 without gapping: 27835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29570
length of query: 104
length of database: 1,627,433,809
effective HSP length: 80
effective length of query: 24
effective length of database: 1,534,293,249
effective search space: 36823037976
effective search space used: 36823037976
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)