TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(518 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,164,257 sequences; 587,334,133 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
gb|AF108656.1|AF108656 Gallus gallus prosaposin mRNA, compl... 1003 0.0
dbj|AB003471.1|AB003471 Gallus gallus mRNA for prosaposin, ... 999 0.0
gb|M81355.1|HUMSPHINO Homo sapiens sphingolipid activator p... 642 0.0
dbj|D00422.1|HUMSA Human sphingolipid activator proteins, m... 642 0.0
gb|M60255.1|HUMSAPA1 Human mutant cerebroside sulfate activ... 639 0.0
gb|M60258.1|HUMSAPD1 Human mutant cerebroside sulfate activ... 634 e-180
gb|J03015.1|HUMSAP Homo sapiens sphingolipid activator prot... 632 e-179
ref|NM_002778.1| Homo sapiens prosaposin (variant Gaucher d... 632 e-179
gb|J03077.1|HUMGLBA Human co-beta glucosidase (proactivator... 632 e-179
ref|XM_045140.2| Homo sapiens prosaposin (variant Gaucher d... 632 e-179
gb|BC004275.1|BC004275 Homo sapiens, prosaposin (variant Ga... 632 e-179
gb|M32221.1|HUMSAPABCD Human saposin proteins A-D mRNA, com... 632 e-179
gb|BC001503.1|BC001503 Homo sapiens, prosaposin (variant Ga... 632 e-179
gb|BC007612.1|BC007612 Homo sapiens, prosaposin (variant Ga... 632 e-179
gb|M60257.1|HUMSAPC1 Human mutant cerebroside sulfate activ... 629 e-178
dbj|AB036791.1|AB036791 Bos taurus psap mRNA for prosaposin... 625 e-177
ref|NM_013013.1| Rattus norvegicus Prosaposin (sulfated gly... 560 e-158
gb|M19936.1|RATSGP1A Rat sulfated glycoprotein 1 (SGP-1) mR... 560 e-158
gb|S81353.1|S81353 sulfated glycoprotein-1 [rats, testes, m... 558 e-157
gb|S36200.1|S36200 saposin=sphingolipid activator protein [... 556 e-156
ref|NM_011179.1| Mus musculus prosaposin (Psap), mRNA 556 e-156
gb|S81373.1|S81373 prosaposin=sulfated glycoprotein-1 [rats... 553 e-155
gb|AF276996.1|AF276996 Danio rerio lysosomal cofactor/neuro... 550 e-155
gb|S71616.1|S71616 prosaposin [mice, mRNA, 2593 nt] 549 e-154
gb|U27340.1|MMU27340 Mus musculus sulfated glycoprotein (Sg... 534 e-150
gb|AF108655.1|AF108655 Danio rerio prosaposin precursor, mR... 532 e-149
dbj|AK057878.1|AK057878 Homo sapiens cDNA FLJ25149 fis, clo... 503 e-140
dbj|AK009408.1|AK009408 Mus musculus adult male tongue cDNA... 233 7e-72
ref|XM_084496.1| Homo sapiens similar to prosaposin (varian... 207 2e-51
gb|AE003775.1|AE003775 Drosophila melanogaster genomic scaf... 149 8e-34
gb|AC008219.4|AC008219 Drosophila melanogaster, chromosome ... 149 8e-34
gb|AF162129.1|AF162129 Drosophila melanogaster ecdysone dep... 135 9e-30
dbj|AB008449.1|AB008449 Bombyx mori mRNA for BmP109, comple... 133 4e-29
gb|S82555.1|S82555 Sulfated glycoprotein-1/SGP-1 [sheep, en... 129 7e-28
ref|NM_079858.1| Drosophila melanogaster Saposin-related (S... 127 3e-27
gb|AF145647.1|AF145647 Drosophila melanogaster clone GH0831... 127 3e-27
emb|X14778.1|RNSPB Rat mRNA for pulmonary surfactant-associ... 126 4e-27
ref|XM_087585.1| Homo sapiens LOC153061 (LOC153061), mRNA 124 2e-26
gb|AF154047.1|AF154047 Naegleria fowleri naegleriapore B po... 118 2e-24
gb|M12710.1|HUMSHP1A Human sphingolipid activator protein mRNA 114 2e-23
ref|XM_034120.2| Homo sapiens surfactant, pulmonary-associa... 110 3e-22
gb|J02761.1|HUMPSPBA Human pulmonary surfactant-associated ... 110 3e-22
gb|AF033190.1|AF033190 Cavia porcellus surfactant protein-B... 110 4e-22
gb|U17106.1|OCU17106 Oryctolagus cuniculus surfactant prote... 109 6e-22
ref|NM_000542.1| Homo sapiens surfactant, pulmonary-associa... 109 7e-22
gb|M15170.1|DOGSP18A Dog pulmonary surfactant protein 18 (S... 105 1e-20
gb|BC014989.1|BC014989 Homo sapiens, Similar to phospholipi... 104 2e-20
gb|AF196309.1|AF196309 Naegleria fowleri naegleriapore B pr... 103 5e-20
gb|AF107544.1|AF107544 Ovis aries pulmonary surfactant-asso... 103 5e-20
gb|U66367.1|DDU66367 Dictyostelium discoideum SapA (sapA) m... 99 8e-19
gb|M24901.1|RABSPBA Rabbit pulmonary surfactant-associated ... 96 6e-18
gb|M86181.1|HUMPSAPA Human prosaposin (PSAP) gene 96 8e-18
gb|AF154046.1|AF154046 Naegleria fowleri naegleriapore A po... 95 1e-17
gb|U57999.1|MMU57999 Mus musculus prosaposin (psap\SGP-1) g... 82 1e-13
dbj|D17028.1|HUMD3C07M5 Human HepG2 partial cDNA, clone hmd... 70 5e-10
gb|AC073370.6| Homo sapiens chromosome 10 clone RP11-472G21... 66 7e-09
emb|X57108.1|HSCSAP11 Human gene for cerebroside sulfate ac... 65 2e-08
ref|NM_120258.1| Arabidopsis thaliana chromosome 5 CHR5v12... 65 2e-08
gb|AY056420.1| Arabidopsis thaliana AT5g01800/T20L15_70 mRN... 65 2e-08
gb|AF220198.1|AF220198 Vitis riparia putative protein mRNA,... 62 1e-07
gb|M16764.1|HUMSPL Human pulmonary surfactant-associated pr... 62 1e-07
emb|X57107.1|HSCSAP3 Human gene for cerebroside sulfate act... 59 9e-07
ref|NM_115032.1| Arabidopsis thaliana chromosome 3 CHR3v12... 59 1e-06
gb|AF076635.1|AF076635 Ovis aries clone SP-B 41 pulmonary s... 59 1e-06
gb|M19097.1|HUMSP18A Human pulmonary surfactant apoprotein ... 58 2e-06
gb|AF211857.1|AF211857 Ovis aries pulmonary surfactant prot... 58 2e-06
gb|AF076282.1|AF076282 Mustela vison clone SP-B/Short simil... 57 4e-06
gb|AF175768.1|AF175768 Dictyostelium discoideum SAPLIP C pr... 56 7e-06
emb|X69193.1|VCCYNA V.cardunculus mRNA for cynarase 55 2e-05
ref|NM_069043.1| Caenorhabditis elegans 53 8e-05
dbj|AB069959.1|AB069959 Glycine max sapd mRNA for aspartic ... 52 1e-04
emb|Y09123.1|CCY09123 C.calcitrapa mRNA for aspartic protei... 52 1e-04
ref|NM_076834.1| Caenorhabditis elegans 52 1e-04
dbj|AB002695.1|AB002695 Pumpkin mRNA for aspartic endopepti... 52 2e-04
ref|NM_104909.1| Arabidopsis thaliana chromosome 1 CHR1v12... 51 2e-04
ref|NM_101062.1| Arabidopsis thaliana chromosome 1 CHR1v12... 51 2e-04
gb|AY056387.1| Arabidopsis thaliana At1g11910/F12F1_24 mRNA... 51 2e-04
gb|AY070453.1| Arabidopsis thaliana putative aspartic prote... 51 2e-04
gb|AY056403.1| Arabidopsis thaliana At1g11910/F12F1_24 mRNA... 51 2e-04
ref|NM_069046.1| Caenorhabditis elegans 51 2e-04
gb|U51036.1|ATU51036 Arabidopsis thaliana aspartic proteina... 51 2e-04
dbj|AB025359.2|AB025359 Helianthus annuus mRNA for aspartic... 51 2e-04
gb|AY063974.1| Arabidopsis thaliana putative aspartic prote... 51 2e-04
dbj|AB016728.1|AB016728 Dictyostelium discoideum sapA mRNA ... 50 4e-04
emb|X81984.1|CCCYPRSN C.cardunculus mRNA for cyprosin 50 4e-04
ref|NM_069045.1| Caenorhabditis elegans 50 7e-04
emb|X56136.1|HVASPROT Barley mRNA for aspartic proteinase 49 9e-04
dbj|D32144.1|RICAPA Rice mRNA for aspartic protease, comple... 49 9e-04
gb|U61396.1|VUU61396 Vigna unguiculata aspartic proteinase ... 49 0.001
gb|AC012454.8| Homo sapiens BAC clone RP11-439L14 from 2, c... 49 0.001
gb|U40853.1|OCU40853 Oryctolagus cuniculus pulmonary surfac... 49 0.001
gb|M24461.1|HUMSPBAA Human pulmonary surfactant-associated ... 49 0.001
gb|AF400074.1|AF400074 Homo sapiens surfactant, pulmonary-a... 49 0.001
dbj|AB045891.1|AB045891 Nepenthes alata NaAP1 mRNA for aspa... 49 0.002
emb|X77260.1|BOASPR B. oleracea L. gene for aspartic protea... 49 0.002
gb|AF082029.1|AF082029 Hemerocallis hybrid cultivar senesce... 49 0.002
dbj|AB045893.1|AB045893 Nepenthes alata NaAP3 mRNA for aspa... 49 0.002
gb|S78114.1|S78114 surfactant protein B [mice, DBA/2J, live... 48 0.002
emb|AJ237674.1|CCA237674 Cynara cardunculus mRNA for prepro... 48 0.003
dbj|D12777.1|RICASPPRO Rice mRNA for aspartic proteinase, c... 47 0.004
gb|AF196308.1|AF196308 Naegleria fowleri naegleriapore A pr... 47 0.006
dbj|AB021787.1|AB021787 Pyrus pyrifolia PPFRU11 mRNA for as... 46 0.008
dbj|AB045892.1|AB045892 Nepenthes alata NaAP2 mRNA for aspa... 45 0.013
ref|NM_116684.1| Arabidopsis thaliana chromosome 4 CHR4v12... 44 0.029
gb|AF372974.1|AF372974 Arabidopsis thaliana AT4g04460/T26N6... 44 0.029
gb|U40797.2| Caenorhabditis elegans cosmid C28C12, complete... 44 0.029
gb|AF175577.1|AF175577 Tripedalia cystophora J3-crystallin ... 44 0.038
dbj|AB070857.1|AB070857 Glycine max sapa mRNA for aspartic ... 44 0.049
dbj|AB024999.1|AB024999 Cicer arietinum mRNA for aspartic p... 44 0.049
gb|AF076636.1|AF076636 Ovis aries clone SP-B 75-2 pulmonary... 42 0.14
emb|AJ132884.1|CCA132884 Cynara cardunculus mRNA for prepro... 42 0.19
gb|L38775.1|PS30007E Pisolithus tinctorius (F00041) mRNA, E... 42 0.19
gb|AF362767.1|AF362767 Paragonimus westermani clone NJS459 ... 41 0.24
dbj|AB045894.1|AB045894 Nepenthes alata NaAP4 mRNA for aspa... 40 0.41
gb|M60259.1|HUMSAPE1 Human mutant cerebroside sulfate activ... 40 0.41
gb|L46681.1|TOMAPP Lycopersicon esculentum aspartic proteas... 39 0.92
gb|AF082528.1|AF082528 Entamoeba dispar strain SAW 142 pore... 39 0.92
gb|AF259982.1|AF259982 Ipomoea batatas putative aspartic pr... 38 2.1
gb|AF069392.3|AF069392 Vibrio parahaemolyticus polar flagel... 37 4.6
ref|NM_077493.1| sphingomyelin phosphodiesterase 37 4.6
emb|Z32532.1|SMLGGR S.mansoni (Liberian) LGG mRNA 37 6.0
gb|U10431.1|SMU10431 Schistosoma mansoni LGG mRNA, complete... 37 6.0
emb|X76904.1|EHAPBG E.histolytica gene for amoebapore B 36 7.8
ref|NM_059402.1| Caenorhabditis elegans 36 7.8
emb|X85431.1|SSNKLYSIN S.scrofa mRNA for NK-lysin 36 7.8
>gb|AF108656.1|AF108656 Gallus gallus prosaposin mRNA, complete cds
Length = 3831
Score = 1003 bits (2593), Expect = 0.0
Identities = 490/501 (97%), Positives = 490/501 (97%)
Frame = +1
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKV 77
SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKV
Sbjct: 52 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKV 231
Query: 78 LKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALS 137
LKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALS
Sbjct: 232 LKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALS 411
Query: 138 LCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQKSKATEDVC 197
LCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQKSKATEDVC
Sbjct: 412 LCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQKSKATEDVC 591
Query: 198 QDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMMH 257
QDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMMH
Sbjct: 592 QDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMMH 771
Query: 258 MKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEICETM 317
MKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEICETM
Sbjct: 772 MKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEICETM 951
Query: 318 VKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAV 377
VKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAV
Sbjct: 952 VKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAV 1131
Query: 378 CVMLKCCAANXXXXXXXXXXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFL 437
CVMLKCCAAN AGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFL
Sbjct: 1132CVMLKCCAANKPPQQPVVVKPAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFL 1311
Query: 438 PESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDACVWGPGYWC 497
PESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDACVWGPGYWC
Sbjct: 1312PESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDACVWGPGYWC 1491
Query: 498 KNMETAAQCNAVDHCRRHVWN 518
KNMETAAQCNAVDHCRRHVWN
Sbjct: 1492KNMETAAQCNAVDHCRRHVWN 1554
Score = 51.6 bits (122), Expect = 2e-04
Identities = 22/49 (44%), Positives = 32/49 (64%), Gaps = 1/49 (2%)
Frame = +1
Query: 471 TKLGVCGAA-KKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
T LG+ AA P+L C GP WC+++ TA+QC AV HC+++VW+
Sbjct: 19 TLLGLLAAAVASPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWS 165
>dbj|AB003471.1|AB003471 Gallus gallus mRNA for prosaposin, complete cds
Length = 1859
Score = 999 bits (2583), Expect = 0.0
Identities = 488/501 (97%), Positives = 489/501 (97%)
Frame = +1
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKV 77
SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKV
Sbjct: 61 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKV 240
Query: 78 LKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALS 137
LKDNGTEDEIRSYLEK CEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALS
Sbjct: 241 LKDNGTEDEIRSYLEKRCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALS 420
Query: 138 LCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQKSKATEDVC 197
LCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQKSKATEDVC
Sbjct: 421 LCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQKSKATEDVC 600
Query: 198 QDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMMH 257
QDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMMH
Sbjct: 601 QDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMMH 780
Query: 258 MKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEICETM 317
MKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEICETM
Sbjct: 781 MKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEICETM 960
Query: 318 VKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAV 377
VKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAV
Sbjct: 961 VKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAV 1140
Query: 378 CVMLKCCAANXXXXXXXXXXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFL 437
CVMLKCCAAN AGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFL
Sbjct: 1141CVMLKCCAANKPPQQPVVVKPAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFL 1320
Query: 438 PESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDACVWGPGYWC 497
PESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLG+DACVWGPGYWC
Sbjct: 1321PESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGEDACVWGPGYWC 1500
Query: 498 KNMETAAQCNAVDHCRRHVWN 518
KNMETAAQCNAVDHCRRHVWN
Sbjct: 1501KNMETAAQCNAVDHCRRHVWN 1563
Score = 51.6 bits (122), Expect = 2e-04
Identities = 22/49 (44%), Positives = 32/49 (64%), Gaps = 1/49 (2%)
Frame = +1
Query: 471 TKLGVCGAA-KKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
T LG+ AA P+L C GP WC+++ TA+QC AV HC+++VW+
Sbjct: 28 TLLGLLAAAVASPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWS 174
>gb|M81355.1|HUMSPHINO Homo sapiens sphingolipid activator proteins 1 and 2 processed
mutant mRNA, complete cds
Length = 2734
Score = 642 bits (1657), Expect = 0.0
Identities = 293/510 (57%), Positives = 387/510 (75%), Gaps = 10/510 (1%)
Frame = +3
Query: 19 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVL 78
PVL K+C +G VWCQ+++TAS CGAVKHC Q VW+KP V S+PCD+CK++VT G +L
Sbjct: 60 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLPCDICKDVVTAAGDML 239
Query: 79 KDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSL 138
KDN TE+EI YLEKTC++LP +++ CKEIVDSYLPVI+D+IK E +P VCSAL+L
Sbjct: 240 KDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNL 419
Query: 139 CQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQK--SKATEDV 196
C+SLQKHLA + QKQL+SNKIPELD +E+ +PFMAN+PLLLYPQD P+ K K DV
Sbjct: 420 CESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDV 599
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMM 256
CQDCI++VTD+Q AVRTN+TFV++LV H KEECDRLGPGM+D+CK+YIS+YS++AIQMMM
Sbjct: 600 CQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMM 779
Query: 257 HMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHE------VKMETVEKATVQEKTFSV 310
HM+DQQPK+ICA+VGFC VK +P+QTLVPA+V + +E ++K V K+
Sbjct: 780 HMQDQQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVY 959
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
CE+CE +VKEVT L+++NKTE+EI+ + +C LP S+ ++C++ ++ YG +++ +LLE
Sbjct: 960 CEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLE 1139
Query: 371 ATNPEAVCVMLKCCAANXXXXXXXXXXXA--GGFCDICKMIVAYADKELEKNATTTEIEA 428
+PE VC ML C+ GGFC++CK +V Y D+ LEKN+T EI A
Sbjct: 1140EVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILA 1319
Query: 429 LLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDA 488
LEK C FLP+ QC QFV +YEPV++++L E+MDP+FVC K+G C +A KPLLG +
Sbjct: 1320ALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEK 1499
Query: 489 CVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
C+WGP YWC+N ETAAQCNAV+HC+RHVWN
Sbjct: 1500CIWGPSYWCQNTETAAQCNAVEHCKRHVWN 1589
>dbj|D00422.1|HUMSA Human sphingolipid activator proteins, mRNA, complete cds
Length = 2734
Score = 642 bits (1657), Expect = 0.0
Identities = 293/510 (57%), Positives = 387/510 (75%), Gaps = 10/510 (1%)
Frame = +3
Query: 19 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVL 78
PVL K+C +G VWCQ+++TAS CGAVKHC Q VW+KP V S+PCD+CK++VT G +L
Sbjct: 60 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLPCDICKDVVTAAGDML 239
Query: 79 KDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSL 138
KDN TE+EI YLEKTC++LP +++ CKEIVDSYLPVI+D+IK E +P VCSAL+L
Sbjct: 240 KDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNL 419
Query: 139 CQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQK--SKATEDV 196
C+SLQKHLA + QKQL+SNKIPELD +E+ +PFMAN+PLLLYPQD P+ K K DV
Sbjct: 420 CESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDV 599
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMM 256
CQDCI++VTD+Q AVRTN+TFV++LV H KEECDRLGPGM+D+CK+YIS+YS++AIQMMM
Sbjct: 600 CQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMM 779
Query: 257 HMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHE------VKMETVEKATVQEKTFSV 310
HM+DQQPK+ICA+VGFC VK +P+QTLVPA+V + +E ++K V K+
Sbjct: 780 HMQDQQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVY 959
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
CE+CE +VKEVT L+++NKTE+EI+ + +C LP S+ ++C++ ++ YG +++ +LLE
Sbjct: 960 CEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLE 1139
Query: 371 ATNPEAVCVMLKCCAANXXXXXXXXXXXA--GGFCDICKMIVAYADKELEKNATTTEIEA 428
+PE VC ML C+ GGFC++CK +V Y D+ LEKN+T EI A
Sbjct: 1140EVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILA 1319
Query: 429 LLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDA 488
LEK C FLP+ QC QFV +YEPV++++L E+MDP+FVC K+G C +A KPLLG +
Sbjct: 1320ALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEK 1499
Query: 489 CVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
C+WGP YWC+N ETAAQCNAV+HC+RHVWN
Sbjct: 1500CIWGPSYWCQNTETAAQCNAVEHCKRHVWN 1589
>gb|M60255.1|HUMSAPA1 Human mutant cerebroside sulfate activator protein (SAP-MU-9) mRNA,
complete cds
Length = 2726
Score = 639 bits (1647), Expect = 0.0
Identities = 292/510 (57%), Positives = 386/510 (75%), Gaps = 10/510 (1%)
Frame = +1
Query: 19 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVL 78
PVL K+C +G VWCQ+++TAS CGAVKHC Q VW+KP V S+PCD+CK++VT G +L
Sbjct: 52 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLPCDICKDVVTAAGDML 231
Query: 79 KDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSL 138
KDN TE+EI YLEKTC++LP +++ CKEIVDSYLPVI+D+IK E +P VCSAL+L
Sbjct: 232 KDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNL 411
Query: 139 CQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQK--SKATEDV 196
C+SLQKHLA + QKQL+SNKIPELD +E+ +PFMAN+PLLLYPQD P+ K K DV
Sbjct: 412 CESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDV 591
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMM 256
CQDCI++VTD+Q AVRTN+TFV++LV H KEECDRLGPGM+D+ K+YIS+YS++AIQMMM
Sbjct: 592 CQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADISKNYISQYSEIAIQMMM 771
Query: 257 HMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHE------VKMETVEKATVQEKTFSV 310
HM+DQQPK+ICA+VGFC VK +P+QTLVPA+V + +E ++K V K+
Sbjct: 772 HMQDQQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVY 951
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
CE+CE +VKEVT L+++NKTE+EI+ + +C LP S+ ++C++ ++ YG +++ +LLE
Sbjct: 952 CEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLE 1131
Query: 371 ATNPEAVCVMLKCCAANXXXXXXXXXXXA--GGFCDICKMIVAYADKELEKNATTTEIEA 428
+PE VC ML C+ GGFC++CK +V Y D+ LEKN+T EI A
Sbjct: 1132EVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILA 1311
Query: 429 LLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDA 488
LEK C FLP+ QC QFV +YEPV++++L E+MDP+FVC K+G C +A KPLLG +
Sbjct: 1312ALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEK 1491
Query: 489 CVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
C+WGP YWC+N ETAAQCNAV+HC+RHVWN
Sbjct: 1492CIWGPSYWCQNTETAAQCNAVEHCKRHVWN 1581
>gb|M60258.1|HUMSAPD1 Human mutant cerebroside sulfate activator protein (SAP-MU-6) mRNA,
complete cds and with a 6 bp insertion
Length = 2723
Score = 634 bits (1634), Expect = e-180
Identities = 292/510 (57%), Positives = 385/510 (75%), Gaps = 10/510 (1%)
Frame = +1
Query: 19 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVL 78
PVL K+C +G VWCQ+++TAS CGAVKHC Q VW+KP V S+PCD+CK++VT G +L
Sbjct: 52 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLPCDICKDVVTAAGDML 231
Query: 79 KDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSL 138
KDN TE+EI YLEKTC++LP +++ CKEIVDSYLPVI+D+IK E +P VCSAL+L
Sbjct: 232 KDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNL 411
Query: 139 CQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQK--SKATEDV 196
C+SLQKHLA + QKQL+SNKIPELD +E+ +PFMAN+PLLLYPQD P+ K K DV
Sbjct: 412 CESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDV 591
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMM 256
CQDCI++VTD+Q AVRTN+TFV++LV H KEECDRLGPGM+D+ K+YIS+YS++AIQMMM
Sbjct: 592 CQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADISKNYISQYSEIAIQMMM 771
Query: 257 HMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHE------VKMETVEKATVQEKTFSV 310
HM DQQPK+ICA+VGFC VK +P+QTLVPA+V + +E ++K V K+
Sbjct: 772 HM-DQQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVY 948
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
CE+CE +VKEVT L+++NKTE+EI+ + +C LP S+ ++C++ ++ YG +++ +LLE
Sbjct: 949 CEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLE 1128
Query: 371 ATNPEAVCVMLKCCAANXXXXXXXXXXXA--GGFCDICKMIVAYADKELEKNATTTEIEA 428
+PE VC ML C+ GGFC++CK +V Y D+ LEKN+T EI A
Sbjct: 1129EVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILA 1308
Query: 429 LLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDA 488
LEK C FLP+ QC QFV +YEPV++++L E+MDP+FVC K+G C +A KPLLG +
Sbjct: 1309ALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEK 1488
Query: 489 CVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
C+WGP YWC+N ETAAQCNAV+HC+RHVWN
Sbjct: 1489CIWGPSYWCQNTETAAQCNAVEHCKRHVWN 1578
>gb|J03015.1|HUMSAP Homo sapiens sphingolipid activator protein 1 mRNA, 3' end
Length = 2724
Score = 632 bits (1631), Expect = e-179
Identities = 291/510 (57%), Positives = 384/510 (75%), Gaps = 10/510 (1%)
Frame = +1
Query: 19 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVL 78
PVL K+C +G VWCQ+++TAS CGAVKHC Q VW+KP V S+PCD+CK++VT G +L
Sbjct: 58 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLPCDICKDVVTAAGDML 237
Query: 79 KDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSL 138
KDN TE+EI YLEKTC++LP +++ CKEIVDSYLPVI+D+IK E +P VCSAL+L
Sbjct: 238 KDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNL 417
Query: 139 CQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQK--SKATEDV 196
C+SLQKHLA + QKQL+SNKIPELD +E+ +PFMAN+PLLLYPQD P+ K K DV
Sbjct: 418 CESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDV 597
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMM 256
CQDCI++VTD+Q AVRTN+TFV++LV H KEECDRLGPGM+D+CK+YIS+YS++AIQMMM
Sbjct: 598 CQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMM 777
Query: 257 HMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHE------VKMETVEKATVQEKTFSV 310
HM QPK+ICA+VGFC VK +P+QTLVPA+V + +E ++K V K+
Sbjct: 778 HM---QPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVY 948
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
CE+CE +VKEVT L+++NKTE+EI+ + +C LP S+ ++C++ ++ YG +++ +LLE
Sbjct: 949 CEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLE 1128
Query: 371 ATNPEAVCVMLKCCAANXXXXXXXXXXXA--GGFCDICKMIVAYADKELEKNATTTEIEA 428
+PE VC ML C+ GGFC++CK +V Y D+ LEKN+T EI A
Sbjct: 1129EVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILA 1308
Query: 429 LLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDA 488
LEK C FLP+ QC QFV +YEPV++++L E+MDP+FVC K+G C +A KPLLG +
Sbjct: 1309ALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEK 1488
Query: 489 CVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
C+WGP YWC+N ETAAQCNAV+HC+RHVWN
Sbjct: 1489CIWGPSYWCQNTETAAQCNAVEHCKRHVWN 1578
>ref|NM_002778.1| Homo sapiens prosaposin (variant Gaucher disease and variant
metachromatic leukodystrophy) (PSAP), mRNA
Length = 2767
Score = 632 bits (1631), Expect = e-179
Identities = 291/510 (57%), Positives = 384/510 (75%), Gaps = 10/510 (1%)
Frame = +3
Query: 19 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVL 78
PVL K+C +G VWCQ+++TAS CGAVKHC Q VW+KP V S+PCD+CK++VT G +L
Sbjct: 90 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLPCDICKDVVTAAGDML 269
Query: 79 KDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSL 138
KDN TE+EI YLEKTC++LP +++ CKEIVDSYLPVI+D+IK E +P VCSAL+L
Sbjct: 270 KDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNL 449
Query: 139 CQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQK--SKATEDV 196
C+SLQKHLA + QKQL+SNKIPELD +E+ +PFMAN+PLLLYPQD P+ K K DV
Sbjct: 450 CESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDV 629
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMM 256
CQDCI++VTD+Q AVRTN+TFV++LV H KEECDRLGPGM+D+CK+YIS+YS++AIQMMM
Sbjct: 630 CQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMM 809
Query: 257 HMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHE------VKMETVEKATVQEKTFSV 310
HM QPK+ICA+VGFC VK +P+QTLVPA+V + +E ++K V K+
Sbjct: 810 HM---QPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVY 980
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
CE+CE +VKEVT L+++NKTE+EI+ + +C LP S+ ++C++ ++ YG +++ +LLE
Sbjct: 981 CEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLE 1160
Query: 371 ATNPEAVCVMLKCCAANXXXXXXXXXXXA--GGFCDICKMIVAYADKELEKNATTTEIEA 428
+PE VC ML C+ GGFC++CK +V Y D+ LEKN+T EI A
Sbjct: 1161EVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILA 1340
Query: 429 LLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDA 488
LEK C FLP+ QC QFV +YEPV++++L E+MDP+FVC K+G C +A KPLLG +
Sbjct: 1341ALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEK 1520
Query: 489 CVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
C+WGP YWC+N ETAAQCNAV+HC+RHVWN
Sbjct: 1521CIWGPSYWCQNTETAAQCNAVEHCKRHVWN 1610
>gb|J03077.1|HUMGLBA Human co-beta glucosidase (proactivator) mRNA, complete cds
Length = 2767
Score = 632 bits (1631), Expect = e-179
Identities = 291/510 (57%), Positives = 384/510 (75%), Gaps = 10/510 (1%)
Frame = +3
Query: 19 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVL 78
PVL K+C +G VWCQ+++TAS CGAVKHC Q VW+KP V S+PCD+CK++VT G +L
Sbjct: 90 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLPCDICKDVVTAAGDML 269
Query: 79 KDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSL 138
KDN TE+EI YLEKTC++LP +++ CKEIVDSYLPVI+D+IK E +P VCSAL+L
Sbjct: 270 KDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNL 449
Query: 139 CQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQK--SKATEDV 196
C+SLQKHLA + QKQL+SNKIPELD +E+ +PFMAN+PLLLYPQD P+ K K DV
Sbjct: 450 CESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDV 629
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMM 256
CQDCI++VTD+Q AVRTN+TFV++LV H KEECDRLGPGM+D+CK+YIS+YS++AIQMMM
Sbjct: 630 CQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMM 809
Query: 257 HMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHE------VKMETVEKATVQEKTFSV 310
HM QPK+ICA+VGFC VK +P+QTLVPA+V + +E ++K V K+
Sbjct: 810 HM---QPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVY 980
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
CE+CE +VKEVT L+++NKTE+EI+ + +C LP S+ ++C++ ++ YG +++ +LLE
Sbjct: 981 CEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLE 1160
Query: 371 ATNPEAVCVMLKCCAANXXXXXXXXXXXA--GGFCDICKMIVAYADKELEKNATTTEIEA 428
+PE VC ML C+ GGFC++CK +V Y D+ LEKN+T EI A
Sbjct: 1161EVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILA 1340
Query: 429 LLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDA 488
LEK C FLP+ QC QFV +YEPV++++L E+MDP+FVC K+G C +A KPLLG +
Sbjct: 1341ALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEK 1520
Query: 489 CVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
C+WGP YWC+N ETAAQCNAV+HC+RHVWN
Sbjct: 1521CIWGPSYWCQNTETAAQCNAVEHCKRHVWN 1610
>ref|XM_045140.2| Homo sapiens prosaposin (variant Gaucher disease and variant
metachromatic leukodystrophy) (PSAP), mRNA
Length = 2743
Score = 632 bits (1631), Expect = e-179
Identities = 291/510 (57%), Positives = 384/510 (75%), Gaps = 10/510 (1%)
Frame = +2
Query: 19 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVL 78
PVL K+C +G VWCQ+++TAS CGAVKHC Q VW+KP V S+PCD+CK++VT G +L
Sbjct: 80 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLPCDICKDVVTAAGDML 259
Query: 79 KDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSL 138
KDN TE+EI YLEKTC++LP +++ CKEIVDSYLPVI+D+IK E +P VCSAL+L
Sbjct: 260 KDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNL 439
Query: 139 CQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQK--SKATEDV 196
C+SLQKHLA + QKQL+SNKIPELD +E+ +PFMAN+PLLLYPQD P+ K K DV
Sbjct: 440 CESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDV 619
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMM 256
CQDCI++VTD+Q AVRTN+TFV++LV H KEECDRLGPGM+D+CK+YIS+YS++AIQMMM
Sbjct: 620 CQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMM 799
Query: 257 HMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHE------VKMETVEKATVQEKTFSV 310
HM QPK+ICA+VGFC VK +P+QTLVPA+V + +E ++K V K+
Sbjct: 800 HM---QPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVY 970
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
CE+CE +VKEVT L+++NKTE+EI+ + +C LP S+ ++C++ ++ YG +++ +LLE
Sbjct: 971 CEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLE 1150
Query: 371 ATNPEAVCVMLKCCAANXXXXXXXXXXXA--GGFCDICKMIVAYADKELEKNATTTEIEA 428
+PE VC ML C+ GGFC++CK +V Y D+ LEKN+T EI A
Sbjct: 1151EVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILA 1330
Query: 429 LLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDA 488
LEK C FLP+ QC QFV +YEPV++++L E+MDP+FVC K+G C +A KPLLG +
Sbjct: 1331ALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEK 1510
Query: 489 CVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
C+WGP YWC+N ETAAQCNAV+HC+RHVWN
Sbjct: 1511CIWGPSYWCQNTETAAQCNAVEHCKRHVWN 1600
>gb|BC004275.1|BC004275 Homo sapiens, prosaposin (variant Gaucher disease and variant
metachromatic leukodystrophy), clone MGC:10834
IMAGE:3615413, mRNA, complete cds
Length = 2748
Score = 632 bits (1631), Expect = e-179
Identities = 291/510 (57%), Positives = 384/510 (75%), Gaps = 10/510 (1%)
Frame = +2
Query: 19 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVL 78
PVL K+C +G VWCQ+++TAS CGAVKHC Q VW+KP V S+PCD+CK++VT G +L
Sbjct: 65 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLPCDICKDVVTAAGDML 244
Query: 79 KDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSL 138
KDN TE+EI YLEKTC++LP +++ CKEIVDSYLPVI+D+IK E +P VCSAL+L
Sbjct: 245 KDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNL 424
Query: 139 CQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQK--SKATEDV 196
C+SLQKHLA + QKQL+SNKIPELD +E+ +PFMAN+PLLLYPQD P+ K K DV
Sbjct: 425 CESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDV 604
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMM 256
CQDCI++VTD+Q AVRTN+TFV++LV H KEECDRLGPGM+D+CK+YIS+YS++AIQMMM
Sbjct: 605 CQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMM 784
Query: 257 HMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHE------VKMETVEKATVQEKTFSV 310
HM QPK+ICA+VGFC VK +P+QTLVPA+V + +E ++K V K+
Sbjct: 785 HM---QPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVY 955
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
CE+CE +VKEVT L+++NKTE+EI+ + +C LP S+ ++C++ ++ YG +++ +LLE
Sbjct: 956 CEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLE 1135
Query: 371 ATNPEAVCVMLKCCAANXXXXXXXXXXXA--GGFCDICKMIVAYADKELEKNATTTEIEA 428
+PE VC ML C+ GGFC++CK +V Y D+ LEKN+T EI A
Sbjct: 1136EVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILA 1315
Query: 429 LLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDA 488
LEK C FLP+ QC QFV +YEPV++++L E+MDP+FVC K+G C +A KPLLG +
Sbjct: 1316ALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEK 1495
Query: 489 CVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
C+WGP YWC+N ETAAQCNAV+HC+RHVWN
Sbjct: 1496CIWGPSYWCQNTETAAQCNAVEHCKRHVWN 1585
>gb|M32221.1|HUMSAPABCD Human saposin proteins A-D mRNA, complete cds
Length = 2171
Score = 632 bits (1631), Expect = e-179
Identities = 291/510 (57%), Positives = 384/510 (75%), Gaps = 10/510 (1%)
Frame = +1
Query: 19 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVL 78
PVL K+C +G VWCQ+++TAS CGAVKHC Q VW+KP V S+PCD+CK++VT G +L
Sbjct: 58 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLPCDICKDVVTAAGDML 237
Query: 79 KDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSL 138
KDN TE+EI YLEKTC++LP +++ CKEIVDSYLPVI+D+IK E +P VCSAL+L
Sbjct: 238 KDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNL 417
Query: 139 CQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQK--SKATEDV 196
C+SLQKHLA + QKQL+SNKIPELD +E+ +PFMAN+PLLLYPQD P+ K K DV
Sbjct: 418 CESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDV 597
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMM 256
CQDCI++VTD+Q AVRTN+TFV++LV H KEECDRLGPGM+D+CK+YIS+YS++AIQMMM
Sbjct: 598 CQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMM 777
Query: 257 HMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHE------VKMETVEKATVQEKTFSV 310
HM QPK+ICA+VGFC VK +P+QTLVPA+V + +E ++K V K+
Sbjct: 778 HM---QPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVY 948
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
CE+CE +VKEVT L+++NKTE+EI+ + +C LP S+ ++C++ ++ YG +++ +LLE
Sbjct: 949 CEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLE 1128
Query: 371 ATNPEAVCVMLKCCAANXXXXXXXXXXXA--GGFCDICKMIVAYADKELEKNATTTEIEA 428
+PE VC ML C+ GGFC++CK +V Y D+ LEKN+T EI A
Sbjct: 1129EVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILA 1308
Query: 429 LLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDA 488
LEK C FLP+ QC QFV +YEPV++++L E+MDP+FVC K+G C +A KPLLG +
Sbjct: 1309ALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEK 1488
Query: 489 CVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
C+WGP YWC+N ETAAQCNAV+HC+RHVWN
Sbjct: 1489CIWGPSYWCQNTETAAQCNAVEHCKRHVWN 1578
>gb|BC001503.1|BC001503 Homo sapiens, prosaposin (variant Gaucher disease and variant
metachromatic leukodystrophy), clone MGC:2254
IMAGE:3508263, mRNA, complete cds
Length = 2771
Score = 632 bits (1631), Expect = e-179
Identities = 291/510 (57%), Positives = 384/510 (75%), Gaps = 10/510 (1%)
Frame = +3
Query: 19 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVL 78
PVL K+C +G VWCQ+++TAS CGAVKHC Q VW+KP V S+PCD+CK++VT G +L
Sbjct: 66 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLPCDICKDVVTAAGDML 245
Query: 79 KDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSL 138
KDN TE+EI YLEKTC++LP +++ CKEIVDSYLPVI+D+IK E +P VCSAL+L
Sbjct: 246 KDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNL 425
Query: 139 CQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQK--SKATEDV 196
C+SLQKHLA + QKQL+SNKIPELD +E+ +PFMAN+PLLLYPQD P+ K K DV
Sbjct: 426 CESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDV 605
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMM 256
CQDCI++VTD+Q AVRTN+TFV++LV H KEECDRLGPGM+D+CK+YIS+YS++AIQMMM
Sbjct: 606 CQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMM 785
Query: 257 HMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHE------VKMETVEKATVQEKTFSV 310
HM QPK+ICA+VGFC VK +P+QTLVPA+V + +E ++K V K+
Sbjct: 786 HM---QPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVY 956
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
CE+CE +VKEVT L+++NKTE+EI+ + +C LP S+ ++C++ ++ YG +++ +LLE
Sbjct: 957 CEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLE 1136
Query: 371 ATNPEAVCVMLKCCAANXXXXXXXXXXXA--GGFCDICKMIVAYADKELEKNATTTEIEA 428
+PE VC ML C+ GGFC++CK +V Y D+ LEKN+T EI A
Sbjct: 1137EVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILA 1316
Query: 429 LLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDA 488
LEK C FLP+ QC QFV +YEPV++++L E+MDP+FVC K+G C +A KPLLG +
Sbjct: 1317ALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEK 1496
Query: 489 CVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
C+WGP YWC+N ETAAQCNAV+HC+RHVWN
Sbjct: 1497CIWGPSYWCQNTETAAQCNAVEHCKRHVWN 1586
>gb|BC007612.1|BC007612 Homo sapiens, prosaposin (variant Gaucher disease and variant
metachromatic leukodystrophy), clone MGC:15695
IMAGE:3351606, mRNA, complete cds
Length = 2775
Score = 632 bits (1631), Expect = e-179
Identities = 291/510 (57%), Positives = 384/510 (75%), Gaps = 10/510 (1%)
Frame = +1
Query: 19 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVL 78
PVL K+C +G VWCQ+++TAS CGAVKHC Q VW+KP V S+PCD+CK++VT G +L
Sbjct: 70 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLPCDICKDVVTAAGDML 249
Query: 79 KDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSL 138
KDN TE+EI YLEKTC++LP +++ CKEIVDSYLPVI+D+IK E +P VCSAL+L
Sbjct: 250 KDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNL 429
Query: 139 CQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQK--SKATEDV 196
C+SLQKHLA + QKQL+SNKIPELD +E+ +PFMAN+PLLLYPQD P+ K K DV
Sbjct: 430 CESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDV 609
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMM 256
CQDCI++VTD+Q AVRTN+TFV++LV H KEECDRLGPGM+D+CK+YIS+YS++AIQMMM
Sbjct: 610 CQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMM 789
Query: 257 HMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHE------VKMETVEKATVQEKTFSV 310
HM QPK+ICA+VGFC VK +P+QTLVPA+V + +E ++K V K+
Sbjct: 790 HM---QPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVY 960
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
CE+CE +VKEVT L+++NKTE+EI+ + +C LP S+ ++C++ ++ YG +++ +LLE
Sbjct: 961 CEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLE 1140
Query: 371 ATNPEAVCVMLKCCAANXXXXXXXXXXXA--GGFCDICKMIVAYADKELEKNATTTEIEA 428
+PE VC ML C+ GGFC++CK +V Y D+ LEKN+T EI A
Sbjct: 1141EVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILA 1320
Query: 429 LLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDA 488
LEK C FLP+ QC QFV +YEPV++++L E+MDP+FVC K+G C +A KPLLG +
Sbjct: 1321ALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEK 1500
Query: 489 CVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
C+WGP YWC+N ETAAQCNAV+HC+RHVWN
Sbjct: 1501CIWGPSYWCQNTETAAQCNAVEHCKRHVWN 1590
>gb|M60257.1|HUMSAPC1 Human mutant cerebroside sulfate activator protein (SAP-MU-0) mRNA,
complete cds, without the 9 bp insertion found in
alternatively spliced mRNA
Length = 2717
Score = 629 bits (1621), Expect = e-178
Identities = 290/510 (56%), Positives = 383/510 (74%), Gaps = 10/510 (1%)
Frame = +1
Query: 19 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVL 78
PVL K+C +G VWCQ+++TAS CGAVKHC Q VW+KP V S+PCD+CK++VT G +L
Sbjct: 52 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLPCDICKDVVTAAGDML 231
Query: 79 KDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSL 138
KDN TE+EI YLEKTC++LP +++ CKEIVDSYLPVI+D+IK E +P VCSAL+L
Sbjct: 232 KDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNL 411
Query: 139 CQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQK--SKATEDV 196
C+SLQKHLA + QKQL+SNKIPELD +E+ +PFMAN+PLLLYPQD P+ K K DV
Sbjct: 412 CESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDV 591
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMM 256
CQDCI++VTD+Q AVRTN+TFV++LV H KEECDRLGPGM+D+ K+YIS+YS++AIQMMM
Sbjct: 592 CQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADISKNYISQYSEIAIQMMM 771
Query: 257 HMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHE------VKMETVEKATVQEKTFSV 310
HM QPK+ICA+VGFC VK +P+QTLVPA+V + +E ++K V K+
Sbjct: 772 HM---QPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVY 942
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
CE+CE +VKEVT L+++NKTE+EI+ + +C LP S+ ++C++ ++ YG +++ +LLE
Sbjct: 943 CEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLE 1122
Query: 371 ATNPEAVCVMLKCCAANXXXXXXXXXXXA--GGFCDICKMIVAYADKELEKNATTTEIEA 428
+PE VC ML C+ GGFC++CK +V Y D+ LEKN+T EI A
Sbjct: 1123EVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILA 1302
Query: 429 LLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDA 488
LEK C FLP+ QC QFV +YEPV++++L E+MDP+FVC K+G C +A KPLLG +
Sbjct: 1303ALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEK 1482
Query: 489 CVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
C+WGP YWC+N ETAAQCNAV+HC+RHVWN
Sbjct: 1483CIWGPSYWCQNTETAAQCNAVEHCKRHVWN 1572
>dbj|AB036791.1|AB036791 Bos taurus psap mRNA for prosaposin, complete cds
Length = 1685
Score = 625 bits (1613), Expect = e-177
Identities = 290/513 (56%), Positives = 385/513 (74%), Gaps = 12/513 (2%)
Frame = +2
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKV 77
SPVL ++C +G VWCQ+++TA+ CGAV+HC Q VWSKP V S+PCD+CK+++T G +
Sbjct: 95 SPVLGLRECTRGSAVWCQNVKTAADCGAVQHCLQTVWSKPTVKSLPCDICKDVITAAGNL 274
Query: 78 LKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALS 137
LKDN TE EI YLE+TC++LP +++ CKEIVDSYLPVI+DMIK + P VCSAL+
Sbjct: 275 LKDNATEQEILMYLERTCDWLPKPNMSASCKEIVDSYLPVILDMIKGQMSHPGEVCSALN 454
Query: 138 LCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQD----KPKQKSKAT 193
LC+SLQKHLA + QKQL+SN+IPELD +E+ +PFMAN+P LLYPQD KP+ K KA
Sbjct: 455 LCESLQKHLAELNHQKQLESNQIPELDMAEVVAPFMANIPFLLYPQDGSHSKPQPK-KAN 631
Query: 194 EDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQ 253
+VCQDCI+LVTDVQEA+RTN+TFV++LV HAKEECDRLGPGMSDMCK+YI++YS++AIQ
Sbjct: 632 GNVCQDCIQLVTDVQEALRTNSTFVEALVDHAKEECDRLGPGMSDMCKNYINQYSEVAIQ 811
Query: 254 MMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHE------VKMETVEKATVQEKT 307
M+MHM QPK+IC + GFC VK +P++TLVPA+VV E +E ++K K
Sbjct: 812 MVMHM---QPKEICVLAGFCDEVKEMPMKTLVPAEVVSENVIPALGLVEPIKKDPAPAKA 982
Query: 308 FSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDM 367
CE+CE +VKEV L+++N+TEEEI+H ++ VC LP S+ +QC++ ++ YG +++ +
Sbjct: 983 DIYCEVCEFVVKEVAKLIDNNRTEEEILHALDKVCSKLPTSLAEQCQEVVDTYGSSILSI 1162
Query: 368 LLEATNPEAVCVMLKCCAANX--XXXXXXXXXXAGGFCDICKMIVAYADKELEKNATTTE 425
LL+ +PE VC ML C++ GGFC++CK +V Y D+ LEKN+T +
Sbjct: 1163LLDEASPELVCSMLHLCSSRGLPAATVRVMPRKDGGFCEVCKKLVGYLDRNLEKNSTKEQ 1342
Query: 426 IEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLG 485
I A LEK C FLP+ QC QFV +YEPV++++L E+MDP+FVC K+G C AA KPLLG
Sbjct: 1343ILAALEKGCSFLPDQYRKQCDQFVTEYEPVLIEILVEVMDPSFVCLKIGACPAAHKPLLG 1522
Query: 486 DDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
+ CVWGP YWC+NME+AA CNAV+HCRRHVWN
Sbjct: 1523AEKCVWGPSYWCQNMESAALCNAVEHCRRHVWN 1621
Score = 50.1 bits (118), Expect = 5e-04
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +2
Query: 477 GAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
GA P+LG C G WC+N++TAA C AV HC + VW+
Sbjct: 83 GALASPVLGLRECTRGSAVWCQNVKTAADCGAVQHCLQTVWS 208
>ref|NM_013013.1| Rattus norvegicus Prosaposin (sulfated glycoprotein, sphingolipid
hydrolase activator) (Psap), mRNA
Length = 2175
Score = 560 bits (1444), Expect = e-158
Identities = 266/542 (49%), Positives = 371/542 (68%), Gaps = 41/542 (7%)
Frame = +1
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKV 77
SPV K C+ G V C+ ++TA C AVKHCQQ VWSKP S+PCD+CK +VT G +
Sbjct: 76 SPVQDPKICSGGSAVVCRDVKTAVDCRAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNL 255
Query: 78 LKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALS 137
LKDN TE+EI YLEKTC ++ D L++ CKE+VDSYLPVI+DMIK E P VCSAL+
Sbjct: 256 LKDNATEEEILHYLEKTCAWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALN 435
Query: 138 LCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQ--KSKATED 195
LCQSLQ++LA Q+QL+SNKIPE+D + + +PFM+N+PLLLYPQD+P+ + KA ED
Sbjct: 436 LCQSLQEYLAEQN-QRQLESNKIPEVDLARVVAPFMSNIPLLLYPQDRPRSQPQPKANED 612
Query: 196 VCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMM 255
VCQDC++LVTD+Q AVRTN++FV+ LV H KE+CDRLGPG+SD+CK+Y+ +YS++A+QMM
Sbjct: 613 VCQDCMKLVTDIQTAVRTNSSFVQGLVDHVKEDCDRLGPGVSDICKNYVDQYSEVAVQMM 792
Query: 256 MHMKDQQPKDICAMVGFCPSVKSVPLQTLVPA-----QVVHEVKM-ETVEKATVQEKTFS 309
MHM QPK+IC MVGFC VK VP++TLVPA ++ +++ + E+ +Q +
Sbjct: 793 MHM---QPKEICVMVGFCDEVKRVPMRTLVPATEAIKNILPALELTDPYEQDVIQAQNVI 963
Query: 310 VCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLL 369
C++C+ ++++++ L+ +N TEE ++ + C LLPA +C++ + +G +L+D+L+
Sbjct: 964 FCQVCQLVMRKLSELIINNATEELLIKGLSKACSLLPAPASTKCQEVLVTFGPSLLDVLM 1143
Query: 370 EATNPEAVCVMLKCCAANXXXXXXXXXXXA------------------------------ 399
NP +C ++ C+AN A
Sbjct: 1144HEVNPNFLCGVISLCSANPNLVGTLEQPAAAIVSALPKEPAPPKQPEEPKQSALRAHVPP 1323
Query: 400 ---GGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVV 456
GGFC++CK +V Y + LEKN+T EI A LEK C FLP+ QC +FV +YEP++
Sbjct: 1324QKNGGFCEVCKKLVIYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDEFVAEYEPLL 1503
Query: 457 VQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHV 516
+++L E+MDP+FVC+K+GVC +A K LLG + CVWGPGYWC+N ETAA+CNAVDHC+RHV
Sbjct: 1504LEILVEVMDPSFVCSKIGVCPSAYKLLLGTEKCVWGPGYWCQNSETAARCNAVDHCKRHV 1683
Query: 517 WN 518
WN
Sbjct: 1684WN 1689
Score = 36.2 bits (82), Expect = 7.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 478 AAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
A P+ C G C++++TA C AV HC++ VW+
Sbjct: 67 ALTSPVQDPKICSGGSAVVCRDVKTAVDCRAVKHCQQMVWS 189
>gb|M19936.1|RATSGP1A Rat sulfated glycoprotein 1 (SGP-1) mRNA, complete cds
Length = 2175
Score = 560 bits (1444), Expect = e-158
Identities = 266/542 (49%), Positives = 371/542 (68%), Gaps = 41/542 (7%)
Frame = +1
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKV 77
SPV K C+ G V C+ ++TA C AVKHCQQ VWSKP S+PCD+CK +VT G +
Sbjct: 76 SPVQDPKICSGGSAVVCRDVKTAVDCRAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNL 255
Query: 78 LKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALS 137
LKDN TE+EI YLEKTC ++ D L++ CKE+VDSYLPVI+DMIK E P VCSAL+
Sbjct: 256 LKDNATEEEILHYLEKTCAWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALN 435
Query: 138 LCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQ--KSKATED 195
LCQSLQ++LA Q+QL+SNKIPE+D + + +PFM+N+PLLLYPQD+P+ + KA ED
Sbjct: 436 LCQSLQEYLAEQN-QRQLESNKIPEVDLARVVAPFMSNIPLLLYPQDRPRSQPQPKANED 612
Query: 196 VCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMM 255
VCQDC++LVTD+Q AVRTN++FV+ LV H KE+CDRLGPG+SD+CK+Y+ +YS++A+QMM
Sbjct: 613 VCQDCMKLVTDIQTAVRTNSSFVQGLVDHVKEDCDRLGPGVSDICKNYVDQYSEVAVQMM 792
Query: 256 MHMKDQQPKDICAMVGFCPSVKSVPLQTLVPA-----QVVHEVKM-ETVEKATVQEKTFS 309
MHM QPK+IC MVGFC VK VP++TLVPA ++ +++ + E+ +Q +
Sbjct: 793 MHM---QPKEICVMVGFCDEVKRVPMRTLVPATEAIKNILPALELTDPYEQDVIQAQNVI 963
Query: 310 VCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLL 369
C++C+ ++++++ L+ +N TEE ++ + C LLPA +C++ + +G +L+D+L+
Sbjct: 964 FCQVCQLVMRKLSELIINNATEELLIKGLSKACSLLPAPASTKCQEVLVTFGPSLLDVLM 1143
Query: 370 EATNPEAVCVMLKCCAANXXXXXXXXXXXA------------------------------ 399
NP +C ++ C+AN A
Sbjct: 1144HEVNPNFLCGVISLCSANPNLVGTLEQPAAAIVSALPKEPAPPKQPEEPKQSALRAHVPP 1323
Query: 400 ---GGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVV 456
GGFC++CK +V Y + LEKN+T EI A LEK C FLP+ QC +FV +YEP++
Sbjct: 1324QKNGGFCEVCKKLVIYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDEFVAEYEPLL 1503
Query: 457 VQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHV 516
+++L E+MDP+FVC+K+GVC +A K LLG + CVWGPGYWC+N ETAA+CNAVDHC+RHV
Sbjct: 1504LEILVEVMDPSFVCSKIGVCPSAYKLLLGTEKCVWGPGYWCQNSETAARCNAVDHCKRHV 1683
Query: 517 WN 518
WN
Sbjct: 1684WN 1689
Score = 36.2 bits (82), Expect = 7.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 478 AAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
A P+ C G C++++TA C AV HC++ VW+
Sbjct: 67 ALTSPVQDPKICSGGSAVVCRDVKTAVDCRAVKHCQQMVWS 189
>gb|S81353.1|S81353 sulfated glycoprotein-1 [rats, testes, mRNA Partial, 1692 nt]
Length = 1692
Score = 558 bits (1437), Expect = e-157
Identities = 266/542 (49%), Positives = 370/542 (68%), Gaps = 41/542 (7%)
Frame = +1
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKV 77
SPV K C+ G V C+ ++TA C AVKHCQQ VWSKP S+PCD+CK +VT G +
Sbjct: 76 SPVQDPKICSGGSAVVCRDVKTAVDCRAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNL 255
Query: 78 LKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALS 137
LKDN TE+EI YLEKTC ++ D L++ CKE+VDSYL VI+DMIK E P VCSAL+
Sbjct: 256 LKDNATEEEILHYLEKTCAWIHDSSLSASCKEVVDSYLLVILDMIKGEMSNPGEVCSALN 435
Query: 138 LCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQ--KSKATED 195
LCQSLQ++LA Q+QL+SNKIPE+D + + +PFM+N+PLLLYPQD+P+ + KA ED
Sbjct: 436 LCQSLQEYLAEQN-QRQLESNKIPEVDLARVVAPFMSNIPLLLYPQDRPRSQPQPKANED 612
Query: 196 VCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMM 255
VCQDC++LVTD+Q AVRTN++FV+ LV H KE+CDRLGPG+SD+CK+Y+ +YS++A+QMM
Sbjct: 613 VCQDCMKLVTDIQTAVRTNSSFVQGLVDHVKEDCDRLGPGVSDICKNYVDQYSEVAVQMM 792
Query: 256 MHMKDQQPKDICAMVGFCPSVKSVPLQTLVPA-----QVVHEVKM-ETVEKATVQEKTFS 309
MHM QPK+IC MVGFC VK VP++TLVPA ++ +++ E E+ +Q +
Sbjct: 793 MHM---QPKEICVMVGFCDEVKRVPMRTLVPATEAIKNILPALELTEPYEQDVIQAQNVI 963
Query: 310 VCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLL 369
C++C+ ++++++ L+ +N TEE ++ + C LLPA +C++ + +G +L+D+L+
Sbjct: 964 FCQVCQLVMRKLSELIINNATEELLIKGLSKACSLLPAPASTKCQEVLVTFGPSLLDVLM 1143
Query: 370 EATNPEAVCVMLKCCAANXXXXXXXXXXXA------------------------------ 399
NP +C ++ C+AN A
Sbjct: 1144HEVNPNFLCGVISLCSANPNLVGTLEQPAAAIVSALPKEPAPPKQPEEPKQSALRAHVPP 1323
Query: 400 ---GGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVV 456
GGFC++CK +V Y + LEKN+T EI A LEK C FLP+ QC +FV +YEP++
Sbjct: 1324QKNGGFCEVCKKLVIYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDEFVAEYEPLL 1503
Query: 457 VQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHV 516
+++L E+MDP+FVC+K+GVC +A K LLG + CVWGPGYWC+N ETAA+CNAVDHC+RHV
Sbjct: 1504LEILVEVMDPSFVCSKIGVCPSAYKLLLGTEKCVWGPGYWCQNSETAARCNAVDHCKRHV 1683
Query: 517 WN 518
WN
Sbjct: 1684WN 1689
Score = 36.2 bits (82), Expect = 7.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 478 AAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
A P+ C G C++++TA C AV HC++ VW+
Sbjct: 67 ALTSPVQDPKICSGGSAVVCRDVKTAVDCRAVKHCQQMVWS 189
>gb|S36200.1|S36200 saposin=sphingolipid activator protein [mice, liver, mRNA, 2567 nt]
Length = 2567
Score = 556 bits (1433), Expect = e-156
Identities = 262/542 (48%), Positives = 364/542 (66%), Gaps = 41/542 (7%)
Frame = +3
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKV 77
SPV K C+ G V C+ ++TA CGAVKHCQQ VWSKP S+PCD+CK +VT G +
Sbjct: 54 SPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNL 233
Query: 78 LKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALS 137
LKDN T++EI YLEKTCE++ D L++ CKE+VDSYLPVI+DMIK E P VCSAL+
Sbjct: 234 LKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALN 413
Query: 138 LCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQ--KSKATED 195
LCQSLQ++LA QKQL+SNKIPE+D + + +PFM+N+PLLLYPQD P+ + KA ED
Sbjct: 414 LCQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANED 590
Query: 196 VCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMM 255
VCQDC++LV+DVQ AV+TN++F++ V H KE+CDRLGPG+SD+CK+Y+ +YS++ +QM+
Sbjct: 591 VCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQML 770
Query: 256 MHMKDQQPKDICAMVGFCPSVKSVPLQTLVPA-QVVHEV-----KMETVEKATVQEKTFS 309
MHM+DQQPK+IC + GFC VK VP++TLVPA + + + M+ E+ VQ
Sbjct: 771 MHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVI 950
Query: 310 VCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLL 369
+C+ C+ ++ + + L+ +N TEE +V + C +LP + +C++ + +G +L+D+ +
Sbjct: 951 LCQTCQFVMNKFSELIVNNATEELLVKGLSNACGVLPDPARTKCQEVVGTFGPSLLDIFI 1130
Query: 370 EATNPEAVCVMLKCCAANXXXXXXXXXXXA------------------------------ 399
NP ++C ++ CAA
Sbjct: 1131HEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLKEPTPPKQPAQPKQSALPAHVPP 1310
Query: 400 ---GGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVV 456
GGFC++CK +V Y + LEKN+T EI A LEK C FLP+ QC FV +YEP++
Sbjct: 1311QKNGGFCEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLL 1490
Query: 457 VQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHV 516
+++L E+MDP FVC+K+GVC +A K LLG + CVWGP YWC+NMETAA+CNAVDHC+RHV
Sbjct: 1491LEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHV 1670
Query: 517 WN 518
WN
Sbjct: 1671WN 1676
Score = 37.0 bits (84), Expect = 4.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 478 AAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
A P+ C G C++++TA C AV HC++ VW+
Sbjct: 45 ALTSPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWS 167
>ref|NM_011179.1| Mus musculus prosaposin (Psap), mRNA
Length = 1961
Score = 556 bits (1432), Expect = e-156
Identities = 263/542 (48%), Positives = 363/542 (66%), Gaps = 41/542 (7%)
Frame = +2
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKV 77
SPV K C+ G V C+ ++TA CGAVKHCQQ VWSKP S+PCD+CK +VT G +
Sbjct: 74 SPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNL 253
Query: 78 LKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALS 137
LKDN T++EI YLEKTCE++ D L++ CKE+VDSYLPVI+DMIK E P VCSAL+
Sbjct: 254 LKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALN 433
Query: 138 LCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQ--KSKATED 195
LCQSLQ++LA QKQL+SNKIPE+D + + +PFM+N+PLLLYPQD P+ + KA ED
Sbjct: 434 LCQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANED 610
Query: 196 VCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMM 255
VCQDC++LV+DVQ AV+TN++F++ V H KE+CDRLGPG+SD+CK+Y+ +YS++ +QM+
Sbjct: 611 VCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQML 790
Query: 256 MHMKDQQPKDICAMVGFCPSVKSVPLQTLVPA-QVVHEV-----KMETVEKATVQEKTFS 309
MHM+DQQPK+IC + GFC VK VP++TLVPA + + + M+ E+ VQ
Sbjct: 791 MHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVI 970
Query: 310 VCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLL 369
+C+ C+ ++ + + L+ +N TEE +V + C LLP + +C++ + +G +L+D+ +
Sbjct: 971 LCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFI 1150
Query: 370 EATNPEAVCVMLKCCAANXXXXXXXXXXXA------------------------------ 399
NP ++C ++ CAA
Sbjct: 1151HEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLKEPTPPKQPAQPKQSALPAHVPP 1330
Query: 400 ---GGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVV 456
GGFC++CK V Y + LEKN+T EI A LEK C FLP+ QC FV +YEP++
Sbjct: 1331QKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLL 1510
Query: 457 VQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHV 516
+++L E+MDP FVC+K+GVC +A K LLG + CVWGP YWC+NMETAA+CNAVDHC+RHV
Sbjct: 1511LEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHV 1690
Query: 517 WN 518
WN
Sbjct: 1691WN 1696
Score = 37.0 bits (84), Expect = 4.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 478 AAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
A P+ C G C++++TA C AV HC++ VW+
Sbjct: 65 ALTSPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWS 187
>gb|S81373.1|S81373 prosaposin=sulfated glycoprotein-1 [rats, Stratagene, testicle,
mRNA, 1737 nt]
Length = 1737
Score = 553 bits (1425), Expect = e-155
Identities = 264/542 (48%), Positives = 370/542 (67%), Gaps = 41/542 (7%)
Frame = +1
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKV 77
SPV K C+ G V C+ ++TA C AVKHCQQ VWSKP S+PCD+CK +VT G +
Sbjct: 73 SPVQDPKICSGGSAVVCRDVKTAVDCRAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNL 252
Query: 78 LKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALS 137
LKDN TE+EI YLEKTC ++ D L++ CKE+VDSYL VI+DMIK E P VCSAL+
Sbjct: 253 LKDNATEEEILHYLEKTCAWIHDSSLSASCKEVVDSYLLVILDMIKGEMSNPGEVCSALN 432
Query: 138 LCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQ--KSKATED 195
LCQSLQ++LA Q+QL+SNKIPE+D + + +PFM+N+PLLLYPQD+P+ + KA ED
Sbjct: 433 LCQSLQEYLAEQN-QRQLESNKIPEVDLARVVAPFMSNIPLLLYPQDRPRSQPQPKANED 609
Query: 196 VCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMM 255
VCQDC++LVTD+Q AVRTN++FV+ LV H KE+CDRLGPG+SD+CK+Y+ +YS++A+QMM
Sbjct: 610 VCQDCMKLVTDIQTAVRTNSSFVQGLVDHVKEDCDRLGPGVSDICKNYVDQYSEVAVQMM 789
Query: 256 MHMKDQQPKDICAMVGFCPSVKSVPLQTLVPA-----QVVHEVKM-ETVEKATVQEKTFS 309
MHM QPK+IC MVGFC VK VP++TLVPA ++ +++ + E+ +Q +
Sbjct: 790 MHM---QPKEICVMVGFCDEVKRVPMRTLVPATEAIKNILPALELTDPYEQDVIQAQNVI 960
Query: 310 VCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLL 369
C++C+ ++++++ L+ +N TEE ++ + C LLPA +C++ + +G +L+D+L+
Sbjct: 961 FCQVCQLVMRKLSELIINNATEELLIKGLSKACSLLPAPASTKCQEVLVTFGPSLLDVLM 1140
Query: 370 EATNPEAVCVMLKCCAANXXXXXXXXXXXA------------------------------ 399
NP +C ++ C+AN A
Sbjct: 1141HEVNPNFLCGVISLCSANPNLVGTLEQPAAAIVSALPKEPAPPKQPEEPKQSALRAHVPP 1320
Query: 400 ---GGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVV 456
GGFC++CK +V Y + LEKN+T E+ A LEK C FLP+ QC +FV +YEP++
Sbjct: 1321QKNGGFCEVCKKLVIYLEHNLEKNSTKEEVLAALEKGCSFLPDPYQKQCDEFVAEYEPLL 1500
Query: 457 VQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHV 516
+++L E+MDP+FVC+K+GVC +A K LLG + CV GPGYWC+NMETAA+CNAVDHC+RHV
Sbjct: 1501LEILVEVMDPSFVCSKIGVCPSAYKLLLGTEKCVRGPGYWCQNMETAARCNAVDHCKRHV 1680
Query: 517 WN 518
WN
Sbjct: 1681WN 1686
Score = 36.2 bits (82), Expect = 7.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 478 AAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
A P+ C G C++++TA C AV HC++ VW+
Sbjct: 64 ALTSPVQDPKICSGGSAVVCRDVKTAVDCRAVKHCQQMVWS 186
>gb|AF276996.1|AF276996 Danio rerio lysosomal cofactor/neurotrophic factor prosaposin mRNA,
complete cds
Length = 2391
Score = 550 bits (1418), Expect = e-155
Identities = 265/517 (51%), Positives = 360/517 (69%), Gaps = 16/517 (3%)
Frame = +3
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKV 77
SP+L + CA+GP WCQ+++TAS CGAV+HCQQNVW+KP + ++PCDLCKE++ VV ++
Sbjct: 111 SPLLGTEQCARGPPYWCQNVKTASLCGAVQHCQQNVWNKPQMKTVPCDLCKEVLVVVEQL 290
Query: 78 LKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALS 137
LKDN TE E+ YLEK C+ +PD+GLA++CKEIVD+Y PV+M +I+ E D P VVC AL
Sbjct: 291 LKDNVTESELLGYLEKACQLIPDEGLANQCKEIVDNYFPVVMGIIQGELDDPGVVCGALG 470
Query: 138 LCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDK---PKQKSKATE 194
LC S Q LA + QL SN+IP++D ++ SPF+ N+P LLYP++K PKQK
Sbjct: 471 LCVSQQAALA----KAQLTSNEIPQVDLNQRVSPFLLNIPQLLYPEEKRETPKQKG---- 626
Query: 195 DVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQM 254
DVCQDC+ ++D Q+ R N++F+ +L+A + +C+ LGPGMSDMCK YIS+Y L Q
Sbjct: 627 DVCQDCVTFISDTQDEARVNSSFINTLIAQVENQCELLGPGMSDMCKEYISQYGPLVFQQ 806
Query: 255 MMHMKDQQPKDICAMVGFCPS-VKSVPLQTLVPAQVVHEVKM---ETVEK--ATVQEKTF 308
+M M QPKDICA GFCP+ KSVP++ L+PA+ + VKM VEK AT+ K
Sbjct: 807 LMSM---QPKDICARAGFCPTKQKSVPMEKLLPAKSIPAVKMFPAVKVEKPVATMPAKNL 977
Query: 309 ------SVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQ 362
C ICE ++KE+ +++ +E EIV +E VC +LP+++ QCKD IE YGQ
Sbjct: 978 VRVRDSPQCAICEYVMKEIENMIQDQTSEAEIVQAVEKVCNILPSTLTAQCKDLIETYGQ 1157
Query: 363 ALIDMLLEATNPEAVCVMLKCCA-ANXXXXXXXXXXXAGGFCDICKMIVAYADKELEKNA 421
A+ID+L++ +P+ VC L C+ + AGGFCD+CKM V Y D LE+NA
Sbjct: 1158AIIDLLVQEADPKTVCSFLALCSGVSHVPVMDKQHFAAGGFCDVCKMAVRYVDGILEQNA 1337
Query: 422 TTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKK 481
T +EIE + KVC FLP++V D+C Q +EQYEP++VQLL + +DP FVC KLG C A +
Sbjct: 1338TQSEIEEAVLKVCSFLPDAVKDECNQLIEQYEPLLVQLLLQTLDPDFVCMKLGACPEAVQ 1517
Query: 482 PLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
LLG + C WGP YWCKN++TAA+CNA+DHCRRHVW+
Sbjct: 1518RLLGLNQCSWGPAYWCKNVQTAARCNALDHCRRHVWS 1628
Score = 61.6 bits (148), Expect = 2e-07
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = +3
Query: 458 QLLAEMMDPTFVCTKLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
Q + E+M + T L V A PLLG + C GP YWC+N++TA+ C AV HC+++VW
Sbjct: 51 QAVPEVM---MLLTLLLVTTAVASPLLGTEQCARGPPYWCQNVKTASLCGAVQHCQQNVW 221
Query: 518 N 518
N
Sbjct: 222 N 224
Score = 47.0 bits (110), Expect = 0.004
Identities = 17/44 (38%), Positives = 30/44 (67%)
Frame = +3
Query: 20 VLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIP 63
+L C+ GP WC++++TA++C A+ HC+++VWS A +P
Sbjct: 1521 LLGLNQCSWGPAYWCKNVQTAARCNALDHCRRHVWS*SASRILP 1652
>gb|S71616.1|S71616 prosaposin [mice, mRNA, 2593 nt]
Length = 2593
Score = 549 bits (1414), Expect = e-154
Identities = 262/542 (48%), Positives = 361/542 (66%), Gaps = 41/542 (7%)
Frame = +1
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKV 77
SPV K C+ G V C+ ++TA CGAVKHCQQ VWSKP S+PCD+CK +VT G +
Sbjct: 97 SPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNL 276
Query: 78 LKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALS 137
LKDN TE+EI YLEKTCE++ D L++ CKE+VDSYLPVI+DMIK E P VCSAL+
Sbjct: 277 LKDNATEEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALN 456
Query: 138 LCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQ--KSKATED 195
LCQSLQ++LA QKQL+SNKIP +D + + +PFM+N+PLLLYPQD P+ + KA ED
Sbjct: 457 LCQSLQEYLAEQN-QKQLESNKIP-VDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANED 630
Query: 196 VCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMM 255
VCQDC++LV+DVQ AV+TN++F++ V H KE+CDRLGPG+SD+CK+Y+ +YS++ +QM
Sbjct: 631 VCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYLDQYSEVCVQMW 810
Query: 256 MHMKDQQPKDICAMVGFCPSVKSVPLQTLVPA-QVVHEV-----KMETVEKATVQEKTFS 309
MHM+DQQPK+IC + GFC VK VP++TLVPA + + + M+ E+ VQ
Sbjct: 811 MHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQDLVQAHNVI 990
Query: 310 VCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLL 369
+C+ C+ ++ + + L+ +N TEE +V + C LLP + +C++ + +G + +D+ +
Sbjct: 991 LCQTCQLVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSQLDIFI 1170
Query: 370 EATNPEAVCVMLKCCAA---------------------------------NXXXXXXXXX 396
NP ++C ++ CAA
Sbjct: 1171HEVNPSSLCGVIGLCAARPELVEALEQPAPRIVSALLKEPTPPKQPAQPKQSALRAHVPP 1350
Query: 397 XXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVV 456
GGFC++CK +V Y + LEKN+T EI A LEK C FLP+ QC FV +YEP++
Sbjct: 1351QKNGGFCEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLL 1530
Query: 457 VQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHV 516
+++L E+MDP FVC+K+GVC +A K LLG + CVWGP YWC+NMETAA+CNAVDHC+RHV
Sbjct: 1531LEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHV 1710
Query: 517 WN 518
WN
Sbjct: 1711WN 1716
Score = 37.0 bits (84), Expect = 4.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 478 AAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
A P+ C G C++++TA C AV HC++ VW+
Sbjct: 88 ALTSPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWS 210
>gb|U27340.1|MMU27340 Mus musculus sulfated glycoprotein (Sgp1) mRNA, complete cds
Length = 2558
Score = 534 bits (1376), Expect = e-150
Identities = 256/542 (47%), Positives = 356/542 (65%), Gaps = 41/542 (7%)
Frame = +3
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKV 77
SPV K C+ G V C+ ++TA CGAVKHCQQ VWSKP S+PCD+CK +VT G +
Sbjct: 78 SPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNL 257
Query: 78 LKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALS 137
LKDN T++EI YLEKTCE++ D L++ CKE+VDSYLPVI+DMIK E P VCSAL+
Sbjct: 258 LKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALN 437
Query: 138 LCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQ--KSKATED 195
LCQSLQ++LA QKQL+SNK+PE+D + + +PF AN+PLLLYPQD P+ + KA ED
Sbjct: 438 LCQSLQEYLAEQN-QKQLESNKVPEVDMARVVAPFSANIPLLLYPQDHPRSQPQPKANED 614
Query: 196 VCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMM 255
VCQDC++LV+DVQ AV+TN++F++ V H KE+CDRLGPG+SD+CK+Y+ +YS++ +Q++
Sbjct: 615 VCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQIL 794
Query: 256 MHMKDQQPKDICAMVGFCPSVKSVPLQTLVPA-QVVHEV-----KMETVEKATVQEKTFS 309
MHM QPK+IC + GFC VK VP++TLVPA + + + M+ E+ VQ
Sbjct: 795 MHM---QPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVI 965
Query: 310 VCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLL 369
+C+ C+ ++ + + L+ +N TEE +V + C LLP + +C++ + + +L+D +
Sbjct: 966 LCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFDPSLLDDFI 1145
Query: 370 EATNPEAVCVMLKCCAA---------------------------------NXXXXXXXXX 396
NP ++C ++ C A
Sbjct: 1146HEVNPSSLCGVIGLCTALPELVEALEQPAPRIVSALLKEPTPPKQPAQPKQSALPAHVPP 1325
Query: 397 XXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVV 456
GGFC++ K +V Y + LEKN+T EI A LEK C FLP+ QC FV +YEP++
Sbjct: 1326QKNGGFCEVFKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLL 1505
Query: 457 VQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHV 516
+++L E+MDP FVC+K+GVC +A K LLG + CVWGP YWC+NMETAA+CNAVDHC+RHV
Sbjct: 1506LEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHV 1685
Query: 517 WN 518
WN
Sbjct: 1686WN 1691
Score = 37.0 bits (84), Expect = 4.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 478 AAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
A P+ C G C++++TA C AV HC++ VW+
Sbjct: 69 ALTSPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWS 191
>gb|AF108655.1|AF108655 Danio rerio prosaposin precursor, mRNA, complete cds
Length = 2402
Score = 532 bits (1371), Expect = e-149
Identities = 260/517 (50%), Positives = 353/517 (67%), Gaps = 16/517 (3%)
Frame = +1
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKV 77
SP+L + CA+GP WCQ+++TAS CGAV+HCQQNVW+KP + ++PCDLCKE++ VV ++
Sbjct: 127 SPLLGTEQCARGPPYWCQNVKTASLCGAVQHCQQNVWNKPQMKTVPCDLCKEVLVVVEQL 306
Query: 78 LKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALS 137
LKDN TE E+ YLEK C+ +PD+GLA++CKEIV + K E D P VVC AL
Sbjct: 307 LKDNVTESELLGYLEKACQLIPDEGLANQCKEIVTTTSQFSWASSKGELDDPGVVCGALG 486
Query: 138 LCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDK---PKQKSKATE 194
LC S Q LA + QL SN+IP++D ++ SPF+ N+P LLYP++K PKQK
Sbjct: 487 LCVSQQAALA----KAQLTSNEIPQVDLNQRVSPFLLNIPQLLYPEEKRETPKQKG---- 642
Query: 195 DVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQM 254
DVCQDC+ ++D Q+ R N++F+ +L+A + +C+ LGPGMSDMCK YIS+Y L Q
Sbjct: 643 DVCQDCVTFISDTQDEARVNSSFINTLIAQVENQCELLGPGMSDMCKEYISQYGPLVFQQ 822
Query: 255 MMHMKDQQPKDICAMVGFCPSV-KSVPLQTLVPAQVVHEVKM---ETVEK--ATVQEKTF 308
+M M +QQPKDICA GFCP+ KSVP++ L+PA+ + VKM VEK AT+ K
Sbjct: 823 LMSM-EQQPKDICARAGFCPTKQKSVPMEKLLPAKSIPAVKMFPAVKVEKPVATMPAKNL 999
Query: 309 ------SVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQ 362
C ICE ++KE+ +++ +E EIV +E VC +LP+++ QCKD IE YGQ
Sbjct: 1000VRVRDSPQCAICEYVMKEIENMIQDQTSEAEIVQAVEKVCNILPSTLTAQCKDLIETYGQ 1179
Query: 363 ALIDMLLEATNPEAVCVMLKCCAA-NXXXXXXXXXXXAGGFCDICKMIVAYADKELEKNA 421
A+ID+L++ +P+ VC L C+ + AGGFCD+CKM V Y D LE+NA
Sbjct: 1180AIIDLLVQEADPKTVCSFLALCSGVSHVPVMDKQHFAAGGFCDVCKMAVRYVDGILEQNA 1359
Query: 422 TTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKK 481
T +EIE + KVC FLP +V D+C Q +EQYEP++VQLL + +DP FVC KLG C A +
Sbjct: 1360TQSEIEEAVLKVCSFLPYAVKDECNQLIEQYEPLLVQLLLQTLDPDFVCMKLGACPEAVQ 1539
Query: 482 PLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
LLG + C WGP YWCKN++TAA+CNA++HCRRHVW+
Sbjct: 1540RLLGLNQCSWGPAYWCKNVQTAARCNALNHCRRHVWS 1650
Score = 61.6 bits (148), Expect = 2e-07
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = +1
Query: 458 QLLAEMMDPTFVCTKLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
Q + E+M + T L V A PLLG + C GP YWC+N++TA+ C AV HC+++VW
Sbjct: 67 QAVPEVM---MLLTLLLVTTAVASPLLGTEQCARGPPYWCQNVKTASLCGAVQHCQQNVW 237
Query: 518 N 518
N
Sbjct: 238 N 240
Score = 47.4 bits (111), Expect = 0.003
Identities = 17/44 (38%), Positives = 30/44 (67%)
Frame = +1
Query: 20 VLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIP 63
+L C+ GP WC++++TA++C A+ HC+++VWS A +P
Sbjct: 1543 LLGLNQCSWGPAYWCKNVQTAARCNALNHCRRHVWS*SASRILP 1674
>dbj|AK057878.1|AK057878 Homo sapiens cDNA FLJ25149 fis, clone CBR07687, highly similar to
PROACTIVATOR POLYPEPTIDE PRECURSOR
Length = 1683
Score = 503 bits (1295), Expect = e-140
Identities = 242/509 (47%), Positives = 331/509 (64%), Gaps = 10/509 (1%)
Frame = +3
Query: 19 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVL 78
PVL K+C +G VWCQ++ TAS CGAVKHC Q VW+KP V S+PCD+CK++VT G
Sbjct: 102 PVLGLKECTRGSAVWCQNVETASDCGAVKHCLQTVWNKPTVKSLPCDICKDVVTAAG--- 272
Query: 79 KDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSL 138
DM+K+ + E++
Sbjct: 273 -----------------------------------------DMLKDNATEEEILVYLEKT 329
Query: 139 CQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQKSKATE--DV 196
C L K + ++ + S LD +E+ +PFMAN+PLLLYPQD P+ K + + DV
Sbjct: 330 CDWLPKPNMSASCKEIVDSYLPVILDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDV 509
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMM 256
CQDCI++VTD+Q AVRTN+TFV++LV H KEECDRLGPGM+D+CK+YIS+YS++AIQMMM
Sbjct: 510 CQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMM 689
Query: 257 HMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHE------VKMETVEKATVQEKTFSV 310
HM DQQPK+ICA+VGFC VK +P+QTLVPA+V + +E ++K V K+
Sbjct: 690 HM-DQQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVY 866
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
CE+CE +VKEVT L+++NKTE+EI+ + +C LP S+ ++C++ ++ YG +++ +LLE
Sbjct: 867 CEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLE 1046
Query: 371 ATNPEAVCVMLKCCAANXXXXXXXXXXXA--GGFCDICKMIVAYADKELEKNATTTEIEA 428
+PE VC ML C+ GGFC++CK +V Y D+ LEKN+T EI A
Sbjct: 1047EVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILA 1226
Query: 429 LLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDA 488
LEK C FLP+ QC QFV +YEPV++++L E+MDP+FVC K+G C +A KPLLG +
Sbjct: 1227ALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEK 1406
Query: 489 CVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
C+WGP YWC+N ETAAQCNAV+HC+RHVW
Sbjct: 1407CIWGPSYWCQNTETAAQCNAVEHCKRHVW 1493
Score = 49.3 bits (116), Expect = 9e-04
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +3
Query: 482 PLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
P+LG C G WC+N+ETA+ C AV HC + VWN
Sbjct: 102 PVLGLKECTRGSAVWCQNVETASDCGAVKHCLQTVWN 212
>dbj|AK009408.1|AK009408 Mus musculus adult male tongue cDNA, RIKEN full-length enriched
library, clone:2310020A21:homolog to PROSAPOSIN, full
insert sequence
Length = 2232
Score = 233 bits (594), Expect(2) = 7e-72
Identities = 125/397 (31%), Positives = 205/397 (51%), Gaps = 11/397 (2%)
Frame = +1
Query: 132 VCSALSLCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQKSK 191
VC+AL+LC+ LQ+HLA ++ L D +E+ +PF++N L +P P+
Sbjct: 439 VCTALTLCEPLQRHLAETTSERPLTQE-----DANEVMAPFLSNGALSFHPSQMPEGA-- 597
Query: 192 ATEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLA 251
VC DC++L++ +Q+A+ +N T + V + +C +GPG++ +C++YI A
Sbjct: 598 ----VCHDCVQLISLLQDALESNLTLAEVTV---QNQCQSMGPGLAALCENYIHRQFVPA 756
Query: 252 IQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVC 311
Q + + P+++C GFC + L + V ++ME +Q + C
Sbjct: 757 KQTLQGLP---PQEVCRKGGFCERESAHWLTRVAAVDGVPSLEMEMPRTNELQMQLGLTC 927
Query: 312 EICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEA 371
++C +V+E+ L +N TE I H +E VC ++P + QC ++ Y L+ ++ +
Sbjct: 928 DVCLNLVQELDKWLVTNSTEALISHTLERVCTVVPEPLVQQCITLVDTYSPELVQLMSKV 1107
Query: 372 TNPEAVCVMLKCCAANXXXXXXXXXXXA-----------GGFCDICKMIVAYADKELEKN 420
T PE VC +K C + G FC CK ++ + + L+
Sbjct: 1108T-PEKVCETIKLCGSKRRARSISRAVATTPSLPVDEENQGSFCQGCKRLLGMSSQNLDHK 1284
Query: 421 ATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAK 480
+T +I + C LP QC +FV +YEPV+++ L MM+PT +C K+G C K
Sbjct: 1285STKRDILNAFKGGCRILPLPYVMQCNRFVAEYEPVLIESLKFMMNPTDLCKKMGACHGPK 1464
Query: 481 KPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
PLLG D CV GP +WCK+ E A CNA++HC+R VW
Sbjct: 1465TPLLGTDQCVMGPSFWCKSPEAAEMCNALEHCQRLVW 1575
Score = 67.8 bits (164), Expect = 2e-09
Identities = 67/267 (25%), Positives = 107/267 (39%), Gaps = 6/267 (2%)
Frame = +1
Query: 23 QKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIP------CDLCKELVTVVGK 76
Q+ C KG +S ++ AV P N + CD+C LV + K
Sbjct: 784 QEVCRKGGFCERESAHWLTRVAAVDGVPSLEMEMPRTNELQMQLGLTCDVCLNLVQELDK 963
Query: 77 VLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSAL 136
L N TE I LE+ C +P+ L +C +VD+Y P ++ ++ + PE VC +
Sbjct: 964 WLVTNSTEALISHTLERVCTVVPEP-LVQQCITLVDTYSPELVQLMSKV--TPEKVCETI 1134
Query: 137 SLCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQKSKATEDV 196
LC S ++ + S +A P L P D+ Q S
Sbjct: 1135 KLCGSKRR---------------------ARSISRAVATTPSL--PVDEENQGS-----F 1230
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMM 256
CQ C RL+ + + +T + ++ K C L C +++EY + I+ +
Sbjct: 1231 CQGCKRLLGMSSQNLDHKST-KRDILNAFKGGCRILPLPYVMQCNRFVAEYEPVLIESLK 1407
Query: 257 HMKDQQPKDICAMVGFCPSVKSVPLQT 283
M P D+C +G C K+ L T
Sbjct: 1408 FM--MNPTDLCKKMGACHGPKTPLLGT 1482
Score = 64.3 bits (155), Expect(2) = 7e-72
Identities = 25/66 (37%), Positives = 43/66 (64%)
Frame = +2
Query: 49 CQQNVWSKPAVNSIPCDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECK 108
CQ VW+KP V S+PC +C+++ G + TE +I + + KTCE+LP Q +++CK
Sbjct: 188 CQSAVWNKPTVKSLPCSVCQDVAAAAGNGVNPGATESDILTSVMKTCEWLPSQESSAKCK 367
Query: 109 EIVDSY 114
+V+++
Sbjct: 368 WMVNNH 385
Score = 49.7 bits (117), Expect = 7e-04
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKP 57
+P+L C GP WC+S A C A++HCQ+ VW KP
Sbjct: 1465 TPLLGTDQCVMGPSFWCKSPEAAEMCNALEHCQRLVWKKP 1584
Score = 44.3 bits (103), Expect = 0.029
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPC 64
SP+ ++CAKG EVWCQ L+ A++C AV+ + V S + S PC
Sbjct: 96 SPISVPRECAKGSEVWCQDLQAAAKCRAVRTAR--VLSGTSPQSSPC 230
>ref|XM_084496.1| Homo sapiens similar to prosaposin (variant Gaucher disease and
variant metachromatic leukodystrophy) (H. sapiens)
(LOC143355), mRNA
Length = 1081
Score = 207 bits (527), Expect = 2e-51
Identities = 87/173 (50%), Positives = 120/173 (69%), Gaps = 2/173 (1%)
Frame = -2
Query: 348 SVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXXA--GGFCDI 405
S+ ++C++ ++ YG +++ +LLE +PE VC ML C+ GGFC++
Sbjct: 1080 SLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEV 901
Query: 406 CKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMD 465
CK +V Y D+ LEKN+T EI A LEK C FLP+ QC QFV +YEPV++++L E+MD
Sbjct: 900 CKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMD 721
Query: 466 PTFVCTKLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
P+FVC K+G C +A KPLLG + C+WGP YWC+N ETAAQCN V+HC+RHVWN
Sbjct: 720 PSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNTETAAQCNVVEHCKRHVWN 562
Score = 72.0 bits (175), Expect = 1e-10
Identities = 40/149 (26%), Positives = 71/149 (46%)
Frame = -2
Query: 236 MSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKM 295
+S+ C+ + Y + +++ ++ P+ +C+M+ C T +PA VH
Sbjct: 1077 LSEECQEVVDTYGSSILSILL--EEVSPELVCSMLHLCSG-------TRLPALTVH---- 937
Query: 296 ETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKD 355
Q K CE+C+ +V + LE N T++EI+ +E C LP + QC
Sbjct: 936 ------VTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQ 775
Query: 356 FIEVYGQALIDMLLEATNPEAVCVMLKCC 384
F+ Y LI++L+E +P VC+ + C
Sbjct: 774 FVAEYEPVLIEILVEVMDPSFVCLKIGAC 688
Score = 62.0 bits (149), Expect = 1e-07
Identities = 32/83 (38%), Positives = 48/83 (57%)
Frame = -2
Query: 64 CDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIK 123
C++CK+LV + + L+ N T+ EI + LEK C FLPD +C + V Y PV+++++
Sbjct: 909 CEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP-YQKQCDQFVAEYEPVLIEILV 733
Query: 124 EEFDKPEVVCSALSLCQSLQKHL 146
E D P VC + C S K L
Sbjct: 732 EVMD-PSFVCLKIGACPSAHKPL 667
Score = 57.8 bits (138), Expect = 3e-06
Identities = 44/181 (24%), Positives = 75/181 (41%)
Frame = -2
Query: 103 LASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQKHLAAMKLQKQLQSNKIPE 162
L+ EC+E+VD+Y I+ ++ EE PE+VCS L LC
Sbjct: 1077 LSEECQEVVDTYGSSILSILLEEV-SPELVCSMLHLCSG--------------------- 964
Query: 163 LDFSELTSPFMANVPLLLYPQDKPKQKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLV 222
+P L +PK C+ C +LV + + N+T + ++
Sbjct: 963 -----------TRLPALTVHVTQPKDGG-----FCEVCKKLVGYLDRNLEKNST-KQEIL 835
Query: 223 AHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQ 282
A ++ C L C +++EY + I++++ + D P +C +G CPS L
Sbjct: 834 AALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMD--PSFVCLKIGACPSAHKPLLG 661
Query: 283 T 283
T
Sbjct: 660 T 658
Score = 49.3 bits (116), Expect = 9e-04
Identities = 17/37 (45%), Positives = 26/37 (69%)
Frame = -2
Query: 19 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWS 55
P+L + C GP WCQ+ TA+QC V+HC+++VW+
Sbjct: 672 PLLGTEKCIWGPSYWCQNTETAAQCNVVEHCKRHVWN 562
>gb|AE003775.1|AE003775 Drosophila melanogaster genomic scaffold 142000013386035 section 100 of
105, complete sequence
Length = 236109
Score = 149 bits (375), Expect = 8e-34
Identities = 117/489 (23%), Positives = 214/489 (42%), Gaps = 59/489 (12%)
Frame = -2
Query: 47 KHCQQNVWSKPAVNSIPCDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASE 106
K Q+ + + A + IPC+LC++LV + VL N TE E + +E C+ +G E
Sbjct: 215525 KQPQEALVALDAGDDIPCELCEQLVKHLRDVLVANTTETEFKQVMEGFCK--QSKGFKDE 215352
Query: 107 CKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQ----SLQKHLAAMKL-------QKQL 155
C IVD Y VI + + + D C + +CQ S K + M L Q ++
Sbjct: 215351 CLSIVDQYYHVIYETLVSKLDA-NGACCMIGICQKNSASSMKDVPIMPLLPVIEPAQVKI 215175
Query: 156 QSNKIPELDFSEL--TSPFMANVPLL--------LYPQDKPKQKSKATEDVCQDCIRLVT 205
K+ + + +L + P + +L L P + E +C C ++
Sbjct: 215174 TIEKLEKHEKKQLGASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGE-LCTLCEYMLH 214998
Query: 206 DVQEAVRTNATFVKSLVAHAKEE-CDRLGPGMSDMCKSYISEYSDLAIQMMMHMKDQQPK 264
+QE + T +T + H E C +L G++ C++++ Y D I +++ + P+
Sbjct: 214997 FIQETLATPST--DDEIKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALLV--QGLNPR 214830
Query: 265 DICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEICETMVKEVTGL 324
D+C ++ CP K++P + +V++ + A+ E+ C +C V++
Sbjct: 214829 DVCPLMQMCP--KNLPKK--------EDVEVFNPQPAS-DEQDPPTCPLCLFAVEQAQMK 214683
Query: 325 LESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCC 384
+ NK+++ I + +C LP +K++C DF+ Y LIDML+ P+ +CV LK C
Sbjct: 214682 IRDNKSKDNIKKVLNGLCSHLPNEIKEECVDFVNTYSNELIDMLITDFKPQEICVQLKLC 214503
Query: 385 AANXXXXXXXXXX-------------------------------------XAGGFCDICK 407
A C IC+
Sbjct: 214502 PKTTYALWDLRISLEDDVDGEDKSSSEEISFNDIESLEELPPQLAFDPGFTAAPNCLICE 214323
Query: 408 MIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPT 467
+V +K + K+ T I+ +LE+ C + + ++ +C + +++Y + LL + MDP
Sbjct: 214322 ELVKTLEKRMGKHPTRDSIKHILEESCDRMRKPMNTKCHKVIDKYGDKIADLLLKEMDPK 214143
Query: 468 FVCTKLGVC 476
+CT+LG+C
Sbjct: 214142 LICTELGMC 214116
Score = 121 bits (303), Expect = 2e-25
Identities = 81/331 (24%), Positives = 140/331 (41%), Gaps = 49/331 (14%)
Frame = -2
Query: 195 DVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQM 254
++C+ ++ + DV A T F + + K+ G D C S + +Y + +
Sbjct: 215471 ELCEQLVKHLRDVLVANTTETEFKQVMEGFCKQS-----KGFKDECLSIVDQYYHVIYET 215307
Query: 255 MMHMKDQQPKDICAMVGFCP-----SVKSVPLQTLVPAQVVHEVKMETVEKATVQEKT-- 307
++ D C M+G C S+K VP+ L+P +VK+ T+EK EK
Sbjct: 215306 LVSKLDAN--GACCMIGICQKNSASSMKDVPIMPLLPVIEPAQVKI-TIEKLEKHEKKQL 215136
Query: 308 ------FS----------------------------VCEICETMVKEVTGLLESNKTEEE 333
FS +C +CE M+ + L + T++E
Sbjct: 215135 GASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGELCTLCEYMLHFIQETLATPSTDDE 214956
Query: 334 IVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXX 393
I H +E +C LP+ V QC++F+E+YG A+I +L++ NP VC +++ C N
Sbjct: 214955 IKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALLVQGLNPRDVCPLMQMCPKNLPKKED 214776
Query: 394 --------XXXXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQC 445
C +C V A ++ N + I+ +L +C LP + ++C
Sbjct: 214775 VEVFNPQPASDEQDPPTCPLCLFAVEQAQMKIRDNKSKDNIKKVLNGLCSHLPNEIKEEC 214596
Query: 446 VQFVEQYEPVVVQLLAEMMDPTFVCTKLGVC 476
V FV Y ++ +L P +C +L +C
Sbjct: 214595 VDFVNTYSNELIDMLITDFKPQEICVQLKLC 214503
Score = 106 bits (265), Expect = 5e-21
Identities = 111/516 (21%), Positives = 203/516 (38%), Gaps = 66/516 (12%)
Frame = -2
Query: 35 QSLRTASQCGAVKHCQQNVWSKPAV---NSIP---------CDLCKELVTVVGKVLKDNG 82
Q L C ++ C +N+ K V N P C LC V ++DN
Sbjct: 214847 QGLNPRDVCPLMQMCPKNLPKKEDVEVFNPQPASDEQDPPTCPLCLFAVEQAQMKIRDNK 214668
Query: 83 TEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSL 142
++D I+ L C LP++ + EC + V++Y ++DM+ +F KP+ +C L LC
Sbjct: 214667 SKDNIKKVLNGLCSHLPNE-IKEECVDFVNTYSNELIDMLITDF-KPQEICVQLKLCPKT 214494
Query: 143 QKHLAAMKLQKQ-----LQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQKSKATEDVC 197
L +++ + + E+ F+++ S L P C
Sbjct: 214493 TYALWDLRISLEDDVDGEDKSSSEEISFNDIES-------LEELPPQLAFDPGFTAAPNC 214335
Query: 198 QDCIRLVTDVQEAVRTNATFVKSLVAHAKEE-CDRLGPGMSDMCKSYISEYSDLAIQMMM 256
C LV +++ + + T + + H EE CDR+ M+ C I +Y D +++
Sbjct: 214334 LICEELVKTLEKRMGKHPT--RDSIKHILEESCDRMRKPMNTKCHKVIDKYGDKIADLLL 214161
Query: 257 HMKDQQPKDICAMVGFCPSV-------------------------KSVPLQTLVPAQVVH 291
K+ PK IC +G C +V + + V+
Sbjct: 214160 --KEMDPKLICTELGMCILADLDDREY*ILELR*VYV*TNEFHFRNTVEVDEALKYDVIA 213987
Query: 292 EVKMETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKD 351
+ + ++++E C +CE ++ ++ L++ +++I +E VC LPA+V+
Sbjct: 213986 LPRQDNKLSSSIKEPP--TCVLCEFIMTKLDADLKNKTEQDDIKRAIEAVCNRLPATVRK 213813
Query: 352 QCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXXAGGFCDICKMIV- 410
QC F++ Y A++ +L + P+ VC L+ C + C +C +
Sbjct: 213812 QCDTFVDGYASAVLKLLSDVP-PKQVCQKLQLCFSVAVTDEVLE-------CGVCHGVTQ 213657
Query: 411 AYADKELEKNATTTEIEAL--LEKVCHFLP-------------------ESVSDQCVQFV 449
A EK +E+ AL C LP S + QC + +
Sbjct: 213656 ALLPFLREKKDNVSEVTALQMTSVGCENLPAKYYKIVCNLQS*ML*ISISSFALQCSEMI 213477
Query: 450 EQYEPVVVQLLAE-MMDPTFVCTKLGVCGAAKKPLL 484
Y + L +D + +C ++G C ++K L
Sbjct: 213476 SIYGSSIKNLAKRPYIDQSHICAEIGKCFESEKSSL 213369
Score = 90.1 bits (222), Expect = 5e-16
Identities = 74/343 (21%), Positives = 143/343 (41%), Gaps = 22/343 (6%)
Frame = -2
Query: 64 CDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIK 123
C LC+ ++ + + L T+DEI+ +E C LP G+A +C+ V+ Y ++ ++
Sbjct: 215024 CTLCEYMLHFIQETLATPSTDDEIKHTVENICAKLP-SGVAGQCRNFVEMYGDAVIALLV 214848
Query: 124 EEFDKPEVVCSALSLCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQ 183
+ + P VC + +C +P+ + E+ +P A+ Q
Sbjct: 214847 QGLN-PRDVCPLMQMC-----------------PKNLPKKEDVEVFNPQPAS-----DEQ 214737
Query: 184 DKPKQKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSY 243
D P C C+ V Q +R N + ++ C L + + C +
Sbjct: 214736 DPP---------TCPLCLFAVEQAQMKIRDNKS-KDNIKKVLNGLCSHLPNEIKEECVDF 214587
Query: 244 ISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATV 303
++ YS+ I M+ + D +P++IC + CP L ++ E ++ +K++
Sbjct: 214586 VNTYSNELIDML--ITDFKPQEICVQLKLCPKT----TYALWDLRISLEDDVDGEDKSSS 214425
Query: 304 QEKTFS----------------------VCEICETMVKEVTGLLESNKTEEEIVHEMEVV 341
+E +F+ C ICE +VK + + + T + I H +E
Sbjct: 214424 EEISFNDIESLEELPPQLAFDPGFTAAPNCLICEELVKTLEKRMGKHPTRDSIKHILEES 214245
Query: 342 CYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCC 384
C + + +C I+ YG + D+LL+ +P+ +C L C
Sbjct: 214244 CDRMRKPMNTKCHKVIDKYGDKIADLLLKEMDPKLICTELGMC 214116
Score = 67.8 bits (164), Expect = 2e-09
Identities = 56/260 (21%), Positives = 107/260 (40%), Gaps = 16/260 (6%)
Frame = -2
Query: 233 GPGMSDMCKSYISEYSDLAIQMMMHMK--DQQPKDICAMVGFCPSVKSVPL-----QTLV 285
GPG++D + S + + +++ K P+ +C++ G C S + L Q +
Sbjct: 216023 GPGLADESRCEFSPLQHILLNLLLIYKMFPFNPQQVCSVAGLCNSARIDELYKNGIQAGL 215844
Query: 286 PAQVVHEVKMETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLL 345
V +E + +Q S C C + + + + +++V M +C L
Sbjct: 215843 DGTVQNEDDSSEETELAMQPNQLS-CGNCNLLSRLMHSKFAAT-DRDDMVETMLHMCGSL 215670
Query: 346 PASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXX-------XXXXXXXX 398
+S D C + + Y + D + + +AVC + CA+
Sbjct: 215669 -SSFSDACANIVLTYFNDIYDHVSKHLTTDAVCHVSGVCASRYHQHEEEKQPQEALVALD 215493
Query: 399 AGGF--CDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVV 456
AG C++C+ +V + L N T TE + ++E C + D+C+ V+QY V+
Sbjct: 215492 AGDDIPCELCEQLVKHLRDVLVANTTETEFKQVMEGFCK-QSKGFKDECLSIVDQYYHVI 215316
Query: 457 VQLLAEMMDPTFVCTKLGVC 476
+ L +D C +G+C
Sbjct: 215315 YETLVSKLDANGACCMIGIC 215256
Score = 66.2 bits (160), Expect(2) = 8e-19
Identities = 30/101 (29%), Positives = 54/101 (52%), Gaps = 3/101 (2%)
Frame = -3
Query: 34 CQSLRTASQCGAVKHCQQNVWSK---PAVNSIPCDLCKELVTVVGKVLKDNGTEDEIRSY 90
C + +C A +HC Q VW P C +CK++VT LK N TE+E++
Sbjct: 216292 CFLSSNSKECRATRHCIQTVWETQKVPVDTDSICTICKDMVTQARDQLKSNQTEEELKEV 216113
Query: 91 LEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEV 131
E +C+ +P + + EC ++ D +LP +++ + + + P+V
Sbjct: 216112 FEGSCKLIPIKPIQKECIKVADDFLPELVEALASQMN-PDV 215993
Score = 53.5 bits (127), Expect(2) = 8e-19
Identities = 63/262 (24%), Positives = 99/262 (37%), Gaps = 3/262 (1%)
Frame = -2
Query: 129 PEVVCSALSLCQSLQ-KHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPK 187
P+ VCS LC S + L +Q L E D SE T M +P
Sbjct: 215927 PQQVCSVAGLCNSARIDELYKNGIQAGLDGTVQNEDDSSEETELAM-----------QPN 215781
Query: 188 QKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEY 247
Q S C +C L++ + + + AT +V C L SD C + + Y
Sbjct: 215780 QLS------CGNC-NLLSRLMHS-KFAATDRDDMVETMLHMCGSLS-SFSDACANIVLTY 215628
Query: 248 -SDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEK 306
+D+ + H+ +C + G C S HE + + E +
Sbjct: 215627 FNDIYDHVSKHLTTDA---VCHVSGVCAS-----------RYHQHEEEKQPQEALVALDA 215490
Query: 307 TFSV-CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALI 365
+ CE+CE +VK + +L +N TE E ME C KD+C ++ Y +
Sbjct: 215489 GDDIPCELCEQLVKHLRDVLVANTTETEFKQVMEGFC-KQSKGFKDECLSIVDQYYHVIY 215313
Query: 366 DMLLEATNPEAVCVMLKCCAAN 387
+ L+ + C M+ C N
Sbjct: 215312 ETLVSKLDANGACCMIGICQKN 215247
Score = 45.8 bits (107), Expect = 0.010
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = -3
Query: 403 CDICKMIVAYADKELEKNATTTEIEALLEKVCHFLP-ESVSDQCVQFVEQYEPVVVQLLA 461
C ICK +V A +L+ N T E++ + E C +P + + +C++ + + P +V+ LA
Sbjct: 216193 CTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLPELVEALA 216014
Query: 462 EMMDP 466
M+P
Sbjct: 216013 SQMNP 215999
Score = 45.8 bits (107), Expect = 0.010
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -3
Query: 299 EKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPAS-VKDQCKDFI 357
E V T S+C IC+ MV + L+SN+TEEE+ E C L+P ++ +C
Sbjct: 216229 ETQKVPVDTDSICTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVA 216050
Query: 358 EVYGQALIDMLLEATNPE 375
+ + L++ L NP+
Sbjct: 216049 DDFLPELVEALASQMNPD 215996
Score = 43.5 bits (101), Expect = 0.049
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = -2
Query: 468 FVCTKLGVCGAAKKPLLGDDACVWGPGYWCKN 499
FVC GV AA PLLG C WGP YWC N
Sbjct: 218132 FVCFLAGVFAAAT-PLLGSSKCTWGPSYWCGN 218040
>gb|AC008219.4|AC008219 Drosophila melanogaster, chromosome 3R, region 100A-100A, BAC clone
BACR03C06, complete sequence
Length = 156335
Score = 149 bits (375), Expect = 8e-34
Identities = 117/489 (23%), Positives = 214/489 (42%), Gaps = 59/489 (12%)
Frame = -1
Query: 47 KHCQQNVWSKPAVNSIPCDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASE 106
K Q+ + + A + IPC+LC++LV + VL N TE E + +E C+ +G E
Sbjct: 38558 KQPQEALVALDAGDDIPCELCEQLVKHLRDVLVANTTETEFKQVMEGFCK--QSKGFKDE 38385
Query: 107 CKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQ----SLQKHLAAMKL-------QKQL 155
C IVD Y VI + + + D C + +CQ S K + M L Q ++
Sbjct: 38384 CLSIVDQYYHVIYETLVSKLDA-NGACCMIGICQKNSASSMKDVPIMPLLPVIEPAQVKI 38208
Query: 156 QSNKIPELDFSEL--TSPFMANVPLL--------LYPQDKPKQKSKATEDVCQDCIRLVT 205
K+ + + +L + P + +L L P + E +C C ++
Sbjct: 38207 TIEKLEKHEKKQLGASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGE-LCTLCEYMLH 38031
Query: 206 DVQEAVRTNATFVKSLVAHAKEE-CDRLGPGMSDMCKSYISEYSDLAIQMMMHMKDQQPK 264
+QE + T +T + H E C +L G++ C++++ Y D I +++ + P+
Sbjct: 38030 FIQETLATPST--DDEIKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALLV--QGLNPR 37863
Query: 265 DICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEICETMVKEVTGL 324
D+C ++ CP K++P + +V++ + A+ E+ C +C V++
Sbjct: 37862 DVCPLMQMCP--KNLPKK--------EDVEVFNPQPAS-DEQDPPTCPLCLFAVEQAQMK 37716
Query: 325 LESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCC 384
+ NK+++ I + +C LP +K++C DF+ Y LIDML+ P+ +CV LK C
Sbjct: 37715 IRDNKSKDNIKKVLNGLCSHLPNEIKEECVDFVNTYSNELIDMLITDFKPQEICVQLKLC 37536
Query: 385 AANXXXXXXXXXX-------------------------------------XAGGFCDICK 407
A C IC+
Sbjct: 37535 PKTTYALWDLRISLEDDVDGEDKSSSEEISFNDIESLEELPPQLAFDPGFTAAPNCLICE 37356
Query: 408 MIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPT 467
+V +K + K+ T I+ +LE+ C + + ++ +C + +++Y + LL + MDP
Sbjct: 37355 ELVKTLEKRMGKHPTRDSIKHILEESCDRMRKPMNTKCHKVIDKYGDKIADLLLKEMDPK 37176
Query: 468 FVCTKLGVC 476
+CT+LG+C
Sbjct: 37175 LICTELGMC 37149
Score = 121 bits (303), Expect = 2e-25
Identities = 81/331 (24%), Positives = 140/331 (41%), Gaps = 49/331 (14%)
Frame = -1
Query: 195 DVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQM 254
++C+ ++ + DV A T F + + K+ G D C S + +Y + +
Sbjct: 38504 ELCEQLVKHLRDVLVANTTETEFKQVMEGFCKQS-----KGFKDECLSIVDQYYHVIYET 38340
Query: 255 MMHMKDQQPKDICAMVGFCP-----SVKSVPLQTLVPAQVVHEVKMETVEKATVQEKT-- 307
++ D C M+G C S+K VP+ L+P +VK+ T+EK EK
Sbjct: 38339 LVSKLDAN--GACCMIGICQKNSASSMKDVPIMPLLPVIEPAQVKI-TIEKLEKHEKKQL 38169
Query: 308 ------FS----------------------------VCEICETMVKEVTGLLESNKTEEE 333
FS +C +CE M+ + L + T++E
Sbjct: 38168 GASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGELCTLCEYMLHFIQETLATPSTDDE 37989
Query: 334 IVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXX 393
I H +E +C LP+ V QC++F+E+YG A+I +L++ NP VC +++ C N
Sbjct: 37988 IKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALLVQGLNPRDVCPLMQMCPKNLPKKED 37809
Query: 394 --------XXXXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQC 445
C +C V A ++ N + I+ +L +C LP + ++C
Sbjct: 37808 VEVFNPQPASDEQDPPTCPLCLFAVEQAQMKIRDNKSKDNIKKVLNGLCSHLPNEIKEEC 37629
Query: 446 VQFVEQYEPVVVQLLAEMMDPTFVCTKLGVC 476
V FV Y ++ +L P +C +L +C
Sbjct: 37628 VDFVNTYSNELIDMLITDFKPQEICVQLKLC 37536
Score = 106 bits (265), Expect = 5e-21
Identities = 111/516 (21%), Positives = 203/516 (38%), Gaps = 66/516 (12%)
Frame = -1
Query: 35 QSLRTASQCGAVKHCQQNVWSKPAV---NSIP---------CDLCKELVTVVGKVLKDNG 82
Q L C ++ C +N+ K V N P C LC V ++DN
Sbjct: 37880 QGLNPRDVCPLMQMCPKNLPKKEDVEVFNPQPASDEQDPPTCPLCLFAVEQAQMKIRDNK 37701
Query: 83 TEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSL 142
++D I+ L C LP++ + EC + V++Y ++DM+ +F KP+ +C L LC
Sbjct: 37700 SKDNIKKVLNGLCSHLPNE-IKEECVDFVNTYSNELIDMLITDF-KPQEICVQLKLCPKT 37527
Query: 143 QKHLAAMKLQKQ-----LQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQKSKATEDVC 197
L +++ + + E+ F+++ S L P C
Sbjct: 37526 TYALWDLRISLEDDVDGEDKSSSEEISFNDIES-------LEELPPQLAFDPGFTAAPNC 37368
Query: 198 QDCIRLVTDVQEAVRTNATFVKSLVAHAKEE-CDRLGPGMSDMCKSYISEYSDLAIQMMM 256
C LV +++ + + T + + H EE CDR+ M+ C I +Y D +++
Sbjct: 37367 LICEELVKTLEKRMGKHPT--RDSIKHILEESCDRMRKPMNTKCHKVIDKYGDKIADLLL 37194
Query: 257 HMKDQQPKDICAMVGFCPSV-------------------------KSVPLQTLVPAQVVH 291
K+ PK IC +G C +V + + V+
Sbjct: 37193 --KEMDPKLICTELGMCILADLDDREY*ILELR*VYV*TNEFHFRNTVEVDEALKYDVIA 37020
Query: 292 EVKMETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKD 351
+ + ++++E C +CE ++ ++ L++ +++I +E VC LPA+V+
Sbjct: 37019 LPRQDNKLSSSIKEPP--TCVLCEFIMTKLDADLKNKTEQDDIKRAIEAVCNRLPATVRK 36846
Query: 352 QCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXXAGGFCDICKMIV- 410
QC F++ Y A++ +L + P+ VC L+ C + C +C +
Sbjct: 36845 QCDTFVDGYASAVLKLLSDVP-PKQVCQKLQLCFSVAVTDEVLE-------CGVCHGVTQ 36690
Query: 411 AYADKELEKNATTTEIEAL--LEKVCHFLP-------------------ESVSDQCVQFV 449
A EK +E+ AL C LP S + QC + +
Sbjct: 36689 ALLPFLREKKDNVSEVTALQMTSVGCENLPAKYYKIVCNLQS*ML*ISISSFALQCSEMI 36510
Query: 450 EQYEPVVVQLLAE-MMDPTFVCTKLGVCGAAKKPLL 484
Y + L +D + +C ++G C ++K L
Sbjct: 36509 SIYGSSIKNLAKRPYIDQSHICAEIGKCFESEKSSL 36402
Score = 90.1 bits (222), Expect = 5e-16
Identities = 74/343 (21%), Positives = 143/343 (41%), Gaps = 22/343 (6%)
Frame = -1
Query: 64 CDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIK 123
C LC+ ++ + + L T+DEI+ +E C LP G+A +C+ V+ Y ++ ++
Sbjct: 38057 CTLCEYMLHFIQETLATPSTDDEIKHTVENICAKLP-SGVAGQCRNFVEMYGDAVIALLV 37881
Query: 124 EEFDKPEVVCSALSLCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQ 183
+ + P VC + +C +P+ + E+ +P A+ Q
Sbjct: 37880 QGLN-PRDVCPLMQMC-----------------PKNLPKKEDVEVFNPQPAS-----DEQ 37770
Query: 184 DKPKQKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSY 243
D P C C+ V Q +R N + ++ C L + + C +
Sbjct: 37769 DPP---------TCPLCLFAVEQAQMKIRDNKS-KDNIKKVLNGLCSHLPNEIKEECVDF 37620
Query: 244 ISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATV 303
++ YS+ I M+ + D +P++IC + CP L ++ E ++ +K++
Sbjct: 37619 VNTYSNELIDML--ITDFKPQEICVQLKLCPKT----TYALWDLRISLEDDVDGEDKSSS 37458
Query: 304 QEKTFS----------------------VCEICETMVKEVTGLLESNKTEEEIVHEMEVV 341
+E +F+ C ICE +VK + + + T + I H +E
Sbjct: 37457 EEISFNDIESLEELPPQLAFDPGFTAAPNCLICEELVKTLEKRMGKHPTRDSIKHILEES 37278
Query: 342 CYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCC 384
C + + +C I+ YG + D+LL+ +P+ +C L C
Sbjct: 37277 CDRMRKPMNTKCHKVIDKYGDKIADLLLKEMDPKLICTELGMC 37149
Score = 67.8 bits (164), Expect = 2e-09
Identities = 56/260 (21%), Positives = 107/260 (40%), Gaps = 16/260 (6%)
Frame = -1
Query: 233 GPGMSDMCKSYISEYSDLAIQMMMHMK--DQQPKDICAMVGFCPSVKSVPL-----QTLV 285
GPG++D + S + + +++ K P+ +C++ G C S + L Q +
Sbjct: 39056 GPGLADESRCEFSPLQHILLNLLLIYKMFPFNPQQVCSVAGLCNSARIDELYKNGIQAGL 38877
Query: 286 PAQVVHEVKMETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLL 345
V +E + +Q S C C + + + + +++V M +C L
Sbjct: 38876 DGTVQNEDDSSEETELAMQPNQLS-CGNCNLLSRLMHSKFAAT-DRDDMVETMLHMCGSL 38703
Query: 346 PASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXX-------XXXXXXXX 398
+S D C + + Y + D + + +AVC + CA+
Sbjct: 38702 -SSFSDACANIVLTYFNDIYDHVSKHLTTDAVCHVSGVCASRYHQHEEEKQPQEALVALD 38526
Query: 399 AGGF--CDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVV 456
AG C++C+ +V + L N T TE + ++E C + D+C+ V+QY V+
Sbjct: 38525 AGDDIPCELCEQLVKHLRDVLVANTTETEFKQVMEGFCK-QSKGFKDECLSIVDQYYHVI 38349
Query: 457 VQLLAEMMDPTFVCTKLGVC 476
+ L +D C +G+C
Sbjct: 38348 YETLVSKLDANGACCMIGIC 38289
Score = 66.2 bits (160), Expect(2) = 8e-19
Identities = 30/101 (29%), Positives = 54/101 (52%), Gaps = 3/101 (2%)
Frame = -2
Query: 34 CQSLRTASQCGAVKHCQQNVWSK---PAVNSIPCDLCKELVTVVGKVLKDNGTEDEIRSY 90
C + +C A +HC Q VW P C +CK++VT LK N TE+E++
Sbjct: 39325 CFLSSNSKECRATRHCIQTVWETQKVPVDTDSICTICKDMVTQARDQLKSNQTEEELKEV 39146
Query: 91 LEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEV 131
E +C+ +P + + EC ++ D +LP +++ + + + P+V
Sbjct: 39145 FEGSCKLIPIKPIQKECIKVADDFLPELVEALASQMN-PDV 39026
Score = 53.5 bits (127), Expect(2) = 8e-19
Identities = 63/262 (24%), Positives = 99/262 (37%), Gaps = 3/262 (1%)
Frame = -1
Query: 129 PEVVCSALSLCQSLQ-KHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPK 187
P+ VCS LC S + L +Q L E D SE T M +P
Sbjct: 38960 PQQVCSVAGLCNSARIDELYKNGIQAGLDGTVQNEDDSSEETELAM-----------QPN 38814
Query: 188 QKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEY 247
Q S C +C L++ + + + AT +V C L SD C + + Y
Sbjct: 38813 QLS------CGNC-NLLSRLMHS-KFAATDRDDMVETMLHMCGSLS-SFSDACANIVLTY 38661
Query: 248 -SDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEK 306
+D+ + H+ +C + G C S HE + + E +
Sbjct: 38660 FNDIYDHVSKHLTTDA---VCHVSGVCAS-----------RYHQHEEEKQPQEALVALDA 38523
Query: 307 TFSV-CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALI 365
+ CE+CE +VK + +L +N TE E ME C KD+C ++ Y +
Sbjct: 38522 GDDIPCELCEQLVKHLRDVLVANTTETEFKQVMEGFC-KQSKGFKDECLSIVDQYYHVIY 38346
Query: 366 DMLLEATNPEAVCVMLKCCAAN 387
+ L+ + C M+ C N
Sbjct: 38345 ETLVSKLDANGACCMIGICQKN 38280
Score = 45.8 bits (107), Expect = 0.010
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = -2
Query: 403 CDICKMIVAYADKELEKNATTTEIEALLEKVCHFLP-ESVSDQCVQFVEQYEPVVVQLLA 461
C ICK +V A +L+ N T E++ + E C +P + + +C++ + + P +V+ LA
Sbjct: 39226 CTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLPELVEALA 39047
Query: 462 EMMDP 466
M+P
Sbjct: 39046 SQMNP 39032
Score = 45.8 bits (107), Expect = 0.010
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -2
Query: 299 EKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPAS-VKDQCKDFI 357
E V T S+C IC+ MV + L+SN+TEEE+ E C L+P ++ +C
Sbjct: 39262 ETQKVPVDTDSICTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVA 39083
Query: 358 EVYGQALIDMLLEATNPE 375
+ + L++ L NP+
Sbjct: 39082 DDFLPELVEALASQMNPD 39029
Score = 43.5 bits (101), Expect = 0.049
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = -1
Query: 468 FVCTKLGVCGAAKKPLLGDDACVWGPGYWCKN 499
FVC GV AA PLLG C WGP YWC N
Sbjct: 41165 FVCFLAGVFAAAT-PLLGSSKCTWGPSYWCGN 41073
>gb|AF162129.1|AF162129 Drosophila melanogaster ecdysone dependent glycoprotein (P110)
mRNA, partial cds
Length = 1673
Score = 135 bits (340), Expect = 9e-30
Identities = 116/489 (23%), Positives = 212/489 (42%), Gaps = 59/489 (12%)
Frame = +3
Query: 47 KHCQQNVWSKPAVNSIPCDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASE 106
K Q+ + + A + IPC+LC++LV + VL N TE E + +E C+ +G E
Sbjct: 135 KQPQEALVALDAGDDIPCELCEQLVKHLRDVLVANTTETEFKQVMEGFCK--QSKGFKDE 308
Query: 107 CKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQ----SLQKHLAAMKL-------QKQL 155
C IVD Y VI + + + D C + +CQ S K + M L Q ++
Sbjct: 309 CLSIVDQYYHVIYETLVSKLD-ANGACCMIGICQKNSASSMKDVPIMPLLPVIEPAQVKI 485
Query: 156 QSNKIPELDFSEL--TSPFMANVPLL--------LYPQDKPKQKSKATEDVCQDCIRLVT 205
K+ + + +L + P + +L L P + E +C C ++
Sbjct: 486 TIEKLEKHEKKQLGASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGE-LCTLCEYMLH 662
Query: 206 DVQEAVRTNATFVKSLVAHAKEE-CDRLGPGMSDMCKSYISEYSDLAIQMMMHMKDQQPK 264
+QE + T +T + H E C +L G++ C++++ Y D I ++ ++ P+
Sbjct: 663 FIQETLATPST--DDEIKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALL--VQGLNPR 830
Query: 265 DICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEICETMVKEVTGL 324
D+C ++ CP K++P + +V++ + A+ E+ C +C V++
Sbjct: 831 DVCPLMQMCP--KNLPKK--------EDVEVFNPQPAS-DEQDPPTCPLCLFAVEQAQMK 977
Query: 325 LESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCC 384
+ NK+++ I + +C LP +K++C DF+ Y LIDML+ P+ +CV LK C
Sbjct: 978 IRDNKSKDNIKKVLNGLCSHLPNEIKEECVDFVNTYSNELIDMLITDFKPQEICVQLKLC 1157
Query: 385 AANXXX-------------XXXXXXXXAGGFCDICKM------IVAYADKELEKNA---- 421
F DI + + + D L + A
Sbjct: 1158PKTTYALWDLRISLEDDVDGEHKSSSEEISFNDIESLEELPPQLPSTQDSPLLRTA*SAR 1337
Query: 422 --------------TTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPT 467
T I+ +LE+ C + + ++ +C + +++Y + LL + MDP
Sbjct: 1338SWLRPWREAYGQAPTRDSIKHILEESCDPMRKPMNTKCHKVIDKYGDKIADLLLKEMDPK 1517
Query: 468 FVCTKLGVC 476
+CT+LG+C
Sbjct: 1518LICTELGMC 1544
Score = 121 bits (303), Expect = 2e-25
Identities = 81/331 (24%), Positives = 140/331 (41%), Gaps = 49/331 (14%)
Frame = +3
Query: 195 DVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQM 254
++C+ ++ + DV A T F + + K+ G D C S + +Y + +
Sbjct: 189 ELCEQLVKHLRDVLVANTTETEFKQVMEGFCKQS-----KGFKDECLSIVDQYYHVIYET 353
Query: 255 MMHMKDQQPKDICAMVGFCP-----SVKSVPLQTLVPAQVVHEVKMETVEKATVQEKT-- 307
++ D C M+G C S+K VP+ L+P +VK+ T+EK EK
Sbjct: 354 LVSKLDAN--GACCMIGICQKNSASSMKDVPIMPLLPVIEPAQVKI-TIEKLEKHEKKQL 524
Query: 308 ------FS----------------------------VCEICETMVKEVTGLLESNKTEEE 333
FS +C +CE M+ + L + T++E
Sbjct: 525 GASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGELCTLCEYMLHFIQETLATPSTDDE 704
Query: 334 IVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXX 393
I H +E +C LP+ V QC++F+E+YG A+I +L++ NP VC +++ C N
Sbjct: 705 IKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALLVQGLNPRDVCPLMQMCPKNLPKKED 884
Query: 394 --------XXXXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQC 445
C +C V A ++ N + I+ +L +C LP + ++C
Sbjct: 885 VEVFNPQPASDEQDPPTCPLCLFAVEQAQMKIRDNKSKDNIKKVLNGLCSHLPNEIKEEC 1064
Query: 446 VQFVEQYEPVVVQLLAEMMDPTFVCTKLGVC 476
V FV Y ++ +L P +C +L +C
Sbjct: 1065VDFVNTYSNELIDMLITDFKPQEICVQLKLC 1157
Score = 80.1 bits (196), Expect = 5e-13
Identities = 71/343 (20%), Positives = 139/343 (39%), Gaps = 22/343 (6%)
Frame = +3
Query: 64 CDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIK 123
C LC+ ++ + + L T+DEI+ +E C LP G+A +C+ V+ Y ++ ++
Sbjct: 636 CTLCEYMLHFIQETLATPSTDDEIKHTVENICAKLP-SGVAGQCRNFVEMYGDAVIALLV 812
Query: 124 EEFDKPEVVCSALSLCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQ 183
+ + P VC + +C +P+ + E+ +P A+ Q
Sbjct: 813 QGLN-PRDVCPLMQMC-----------------PKNLPKKEDVEVFNPQPAS-----DEQ 923
Query: 184 DKPKQKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSY 243
D P C C+ V Q +R N + ++ C L + + C +
Sbjct: 924 DPP---------TCPLCLFAVEQAQMKIRDNKS-KDNIKKVLNGLCSHLPNEIKEECVDF 1073
Query: 244 ISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATV 303
++ YS+ I M+ + D +P++IC + CP L ++ E ++ K++
Sbjct: 1074VNTYSNELIDML--ITDFKPQEICVQLKLCPKT----TYALWDLRISLEDDVDGEHKSSS 1235
Query: 304 QEKTFSVCEICETMVKEVTGLLES----------------------NKTEEEIVHEMEVV 341
+E +F+ E E + ++ +S T + I H +E
Sbjct: 1236EEISFNDIESLEELPPQLPSTQDSPLLRTA*SARSWLRPWREAYGQAPTRDSIKHILEES 1415
Query: 342 CYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCC 384
C + + +C I+ YG + D+LL+ +P+ +C L C
Sbjct: 1416CDPMRKPMNTKCHKVIDKYGDKIADLLLKEMDPKLICTELGMC 1544
>dbj|AB008449.1|AB008449 Bombyx mori mRNA for BmP109, complete cds
Length = 3648
Score = 133 bits (335), Expect = 4e-29
Identities = 107/449 (23%), Positives = 182/449 (39%), Gaps = 35/449 (7%)
Frame = +2
Query: 64 CDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIK 123
C C+ + + L D TED++++ +++ C+ LPD L ECKE V Y ++ ++
Sbjct: 1775 CAFCQYFLHYLQVQLSDTRTEDKVKAAVQEACDALPD-ALNGECKEFVTQYGSAVIALLV 1951
Query: 124 EEFDKPEVVCSALSLCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQ 183
+E D P VC AL +C Q+ +I +D + S N PL L+
Sbjct: 1952 QEID-PASVCPALQICP---------------QTEEIRRVDVNSEKS----NCPLCLF-- 2065
Query: 184 DKPKQKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSY 243
A E + E+V N +++ C RL + C +
Sbjct: 2066 --------AVEQL------------ESVLKNNRSEENIRKALDGLCTRLSQKLQSECIDF 2185
Query: 244 ISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQ--------------------- 282
+ YS ++M++ D K+IC + C PL+
Sbjct: 2186 VDTYSSQLVEMLV--ADMNAKEICVFLKLCRDQLHDPLKLTHSSIDKFHAKPTLRGDRNN 2359
Query: 283 ----TLVPAQVV---------HEVKMETVEKATVQEKTFS-VCEICETMVKEVTGLLESN 328
+L+P ++ +E+ +TV V K+ S VC +CE ++KE+ ++
Sbjct: 2360 HRKKSLLPKHMLVSEFSDVETNEILDDTVNGRRVSHKSQSNVCVLCEFVLKEIDDQIKDK 2539
Query: 329 KTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANX 388
++EI + +C +P SV +C F+E Y +I +L + +P VC LK C
Sbjct: 2540 HNDDEIKKAVHGICKHMPKSVSAECDQFVEKYADLVISLLAQELDPSEVCEELKLCKPES 2719
Query: 389 XXXXXXXXXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQF 448
C +C+ +V K L+ I ++EK C LP + QC
Sbjct: 2720 LKINKIKKDILD--CAVCETVVMAVKKVLKNEKLDRNIVHIIEKSCGLLPAKYNAQCYAM 2893
Query: 449 VEQYEPVVVQLLAEMMDPTFVCTKLGVCG 477
+E Y ++ L+ E VC ++G CG
Sbjct: 2894 LEVYGESIIHLIEE-FGAKGVCQRIGFCG 2977
Score = 123 bits (308), Expect = 5e-26
Identities = 107/511 (20%), Positives = 190/511 (36%), Gaps = 54/511 (10%)
Frame = +2
Query: 20 VLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSK---PAVNSIPCDLCKELVTVVGK 76
+L + C GP WC + T +C A HC VWSK P N C +C ++V
Sbjct: 635 LLGKSRCTWGPSYWCSNFSTGRECNATPHCINRVWSKMTFPEDNDNICQICLDMVKQARD 814
Query: 77 VLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSAL 136
L+ N T+DEI+ E +C+ +P + +A C ++ D ++ +++ + E + P+ VCS
Sbjct: 815 QLQSNETQDEIKEVFEGSCKLIPIKFVAEGCMKLADEFVVELIETLASEMN-PQAVCSVA 991
Query: 137 SLCQS--LQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQKSKATE 194
LC + + + L Q++L++
Sbjct: 992 GLCNNAKIDRLLVDYNAQRELRAG------------------------------------ 1063
Query: 195 DVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQM 254
C +C + V V++ + + T + + + C + +SD C I +Y + ++
Sbjct: 1064 --CYNCQKTVGVVRK--KFDETKYEDFLVGLLQVCRNM-DSLSDSCSMLIFKYYENILEA 1228
Query: 255 MMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEIC 314
+ KD P+ IC + G C + P Q+V + V CE C
Sbjct: 1229 V--KKDLNPEGICHVSGQCSYKFHNHDEFTFPEQMVQYSATDDVP-----------CEFC 1369
Query: 315 ETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNP 374
E +VK + +L +N TE E ++ +C KD+C E Y + + L+ P
Sbjct: 1370 EQLVKHLRDVLVANTTELEFYKVLQGLC-KQTGKFKDECLHLAEQYYPVIYNFLVSDLKP 1546
Query: 375 EAVCVMLKCCAANXXXXXXXXXXXAGGFCDICKMIVAYADKELEKNATTTEIE------- 427
C M+ C N + ++ + ++ + ++E
Sbjct: 1547 AETCKMIGIC-GNLTSAPISPLVARELVVKVQPKLIGAEESKIARVPLAKQMEPASAAVS 1723
Query: 428 ------------------ALLEKVCHFLPESVSD------------------------QC 445
A + H+L +SD +C
Sbjct: 1724 VLPLERMFVAAPQSKAACAFCQYFLHYLQVQLSDTRTEDKVKAAVQEACDALPDALNGEC 1903
Query: 446 VQFVEQYEPVVVQLLAEMMDPTFVCTKLGVC 476
+FV QY V+ LL + +DP VC L +C
Sbjct: 1904 KEFVTQYGSAVIALLVQEIDPASVCPALQIC 1996
Score = 114 bits (284), Expect = 3e-23
Identities = 80/338 (23%), Positives = 151/338 (44%), Gaps = 11/338 (3%)
Frame = +2
Query: 58 AVNSIPCDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPV 117
A + +PC+ C++LV + VL N TE E L+ C+ EC + + Y PV
Sbjct: 1340 ATDDVPCEFCEQLVKHLRDVLVANTTELEFYKVLQGLCK--QTGKFKDECLHLAEQYYPV 1513
Query: 118 IMDMIKEEFDKPEVVCSALSLCQSLQK--------HLAAMKLQKQL---QSNKIPELDFS 166
I + + + KP C + +C +L +K+Q +L + +KI + +
Sbjct: 1514 IYNFLVSDL-KPAETCKMIGICGNLTSAPISPLVARELVVKVQPKLIGAEESKIARVPLA 1690
Query: 167 ELTSPFMANVPLLLYPQDKPKQKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAK 226
+ P A V +L P ++ + ++ C C + +Q + T K + A +
Sbjct: 1691 KQMEPASAAVSVL--PLERMFVAAPQSKAACAFCQYFLHYLQVQLSDTRTEDK-VKAAVQ 1861
Query: 227 EECDRLGPGMSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVP 286
E CD L ++ CK ++++Y I +++ D P +C + CP
Sbjct: 1862 EACDALPDALNGECKEFVTQYGSAVIALLVQEID--PASVCPALQICPQT---------- 2005
Query: 287 AQVVHEVKMETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLP 346
E + + V + S C +C V+++ +L++N++EE I ++ +C L
Sbjct: 2006 ---------EEIRRVDVNSEK-SNCPLCLFAVEQLESVLKNNRSEENIRKALDGLCTRLS 2155
Query: 347 ASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCC 384
++ +C DF++ Y L++ML+ N + +CV LK C
Sbjct: 2156 QKLQSECIDFVDTYSSQLVEMLVADMNAKEICVFLKLC 2269
Score = 93.6 bits (231), Expect(2) = 6e-20
Identities = 99/475 (20%), Positives = 185/475 (38%), Gaps = 34/475 (7%)
Frame = +2
Query: 37 LRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVG--KVLKDNGTEDEIRSYLEKT 94
L+ ++CGAV HC VW K + ++ + V + K +KD E+ + + +E
Sbjct: 248 LKRGAECGAVGHCTATVWEKQKPDVSDNEISSKFVKLFRGLKDVKDLINEEYLAASIESA 427
Query: 95 CEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQKHLAAMKLQKQ 154
C + +A CK+ + I ++K E +C + +C + MKL
Sbjct: 428 CHDIQYPAIAKICKDNTAHFENYIHHVLKSN-TSAETMCKIVGMCNN-------MKLDNI 583
Query: 155 LQSNK----IPELDFSELT-------------SPFMANVPLLLYPQDKPKQKSKAT---- 193
+ NK +P +L S F P + SK T
Sbjct: 584 ISLNKKSTNVPVKHKDQLLGKSRCTWGPSYWCSNFSTGRECNATPHCINRVWSKMTFPED 763
Query: 194 -EDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGP--GMSDMCKSYISEYSDL 250
+++CQ C+ +V ++ +++N T + + E +L P +++ C E+
Sbjct: 764 NDNICQICLDMVKQARDQLQSNET--QDEIKEVFEGSCKLIPIKFVAEGCMKLADEFVVE 937
Query: 251 AIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSV 310
I+ + + P+ +C++ G C + K L LV E++ +
Sbjct: 938 LIETLA--SEMNPQAVCSVAGLCNNAKIDRL--LVDYNAQRELR--------------AG 1063
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
C C+ V V + K E+ +V ++V + S+ D C I Y + +++ + +
Sbjct: 1064CYNCQKTVGVVRKKFDETKYEDFLVGLLQVCRNM--DSLSDSCSMLIFKYYENILEAVKK 1237
Query: 371 ATNPEAVCVMLKCCAANXXXXXXXX--------XXXAGGFCDICKMIVAYADKELEKNAT 422
NPE +C + C+ C+ C+ +V + L N T
Sbjct: 1238DLNPEGICHVSGQCSYKFHNHDEFTFPEQMVQYSATDDVPCEFCEQLVKHLRDVLVANTT 1417
Query: 423 TTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCG 477
E +L+ +C + D+C+ EQY PV+ L + P C +G+CG
Sbjct: 1418ELEFYKVLQGLCKQTGK-FKDECLHLAEQYYPVIYNFLVSDLKPAETCKMIGICG 1579
Score = 59.7 bits (143), Expect = 7e-07
Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Frame = +2
Query: 426 IEALLEKVCHFLP-ESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAK---- 480
+ A +E CH + +++ C +E + +L +C +G+C K
Sbjct: 404 LAASIESACHDIQYPAIAKICKDNTAHFENYIHHVLKSNTSAETMCKIVGMCNNMKLDNI 583
Query: 481 ---------------KPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
LLG C WGP YWC N T +CNA HC VW+
Sbjct: 584 ISLNKKSTNVPVKHKDQLLGKSRCTWGPSYWCSNFSTGRECNATPHCINRVWS 742
Score = 52.4 bits (124), Expect = 1e-04
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +2
Query: 403 CDICKMIVAYADKELEKNATTTEIEALLEKVCHFLP-ESVSDQCVQFVEQYEPVVVQLLA 461
C IC +V A +L+ N T EI+ + E C +P + V++ C++ +++ +++ LA
Sbjct: 776 CQICLDMVKQARDQLQSNETQDEIKEVFEGSCKLIPIKFVAEGCMKLADEFVVELIETLA 955
Query: 462 EMMDPTFVCTKLGVCGAAK 480
M+P VC+ G+C AK
Sbjct: 956 SEMNPQAVCSVAGLCNNAK 1012
Score = 40.4 bits (93), Expect = 0.41
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +2
Query: 35 QSLRTASQCGAVKHCQQNVW--SKPAVNSIPCDLCKELVTVVGKVLKDNGTEDEIRSYLE 92
Q L + C +K C+ +K + + C +C+ +V V KVLK+ + I +E
Sbjct: 2663 QELDPSEVCEELKLCKPESLKINKIKKDILDCAVCETVVMAVKKVLKNEKLDRNIVHIIE 2842
Query: 93 KTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQKHLAAMKLQ 152
K+C LP + ++C +++ Y I+ +I EEF + VC + C + M +
Sbjct: 2843 KSCGLLPAK-YNAQCYAMLEVYGESIIHLI-EEFG-AKGVCQRIGFCGRTETAYVRMYRE 3013
Query: 153 KQ 154
K+
Sbjct: 3014 KR 3019
Score = 30.0 bits (66), Expect(2) = 6e-20
Identities = 9/13 (69%), Positives = 13/13 (99%)
Frame = +1
Query: 24 KDCAKGPEVWCQS 36
++CAKGP+VWC+S
Sbjct: 208 EECAKGPQVWCES 246
>gb|S82555.1|S82555 Sulfated glycoprotein-1/SGP-1 [sheep, endometrium, mRNA Partial,
364 nt]
Length = 364
Score = 129 bits (324), Expect = 7e-28
Identities = 61/124 (49%), Positives = 90/124 (72%), Gaps = 6/124 (4%)
Frame = +2
Query: 204 VTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMMHMKDQQP 263
VTD+Q AVRTN+TFV+ LV H KEECDRLGPGM+D+CK+Y+++YS++A+QMMMHM QP
Sbjct: 2 VTDIQTAVRTNSTFVQGLVDHVKEECDRLGPGMADICKNYLAQYSEIAVQMMMHM---QP 172
Query: 264 KDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVE------KATVQEKTFSVCEICETM 317
K+I A+VGFC VK P++TL PA+ + + +E + + +T C++C+ +
Sbjct: 173 KEISALVGFCDEVKESPMRTLDPAKEASKNILPALELTEPNKQQEIPAQTLIFCQVCQFV 352
Query: 318 VKEV 321
++EV
Sbjct: 353 MREV 364
>ref|NM_079858.1| Drosophila melanogaster Saposin-related (Sap-r), mRNA
Length = 3428
Score = 127 bits (319), Expect = 3e-27
Identities = 97/376 (25%), Positives = 159/376 (41%), Gaps = 6/376 (1%)
Frame = +2
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSK---PAVNSIPCDLCKELVTVV 74
+P+L C GP WC + + +C A +HC Q VW P C +CK++VT
Sbjct: 197 TPLLGSSKCTWGPSYWCGNFSNSKECRATRHCIQTVWETQKVPVDTDSICTICKDMVTQA 376
Query: 75 GKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCS 134
LK N TE+E++ E +C+ +P + + EC ++ D +LP +++ + + + P+ VCS
Sbjct: 377 RDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLPELVEALASQMN-PDQVCS 553
Query: 135 ALSLCQSLQ-KHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQKSKAT 193
LC S + L +Q L E D SE T M +P Q S
Sbjct: 554 VAGLCNSARIDELYKNGIQAGLDGTVQNEDDSSEETELAM-----------QPNQLS--- 691
Query: 194 EDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEY-SDLAI 252
C +C L++ + + + AT +V C L SD C + + Y +D+
Sbjct: 692 ---CGNC-NLLSRLMHS-KFAATDRDDMVETMLHMCGSLS-SFSDACANIVLTYFNDIYD 853
Query: 253 QMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSV-C 311
+ H+ +C + G C S HE + + E + + C
Sbjct: 854 HVSKHLTTDA---VCHVSGVCAS-----------RYHQHEEEKQPQEALVALDAGDDIPC 991
Query: 312 EICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEA 371
E+CE +VK + +L +N TE E ME C KD+C ++ Y + + L+
Sbjct: 992 ELCEQLVKHLRDVLVANTTETEFKQVMEGFC-KQSKGFKDECLSIVDQYYHVIYETLVSK 1168
Query: 372 TNPEAVCVMLKCCAAN 387
+ C M+ C N
Sbjct: 1169LDANGACCMIGICQKN 1216
Score = 122 bits (305), Expect = 1e-25
Identities = 108/474 (22%), Positives = 200/474 (41%), Gaps = 24/474 (5%)
Frame = +2
Query: 35 QSLRTASQCGAVKHCQQNVWSKPAV---NSIP---------CDLCKELVTVVGKVLKDNG 82
Q L C ++ C +N+ K V N P C LC V ++DN
Sbjct: 1616 QGLNPRDVCPLMQMCPKNLPKKEDVEVFNPQPASDEQDPPTCPLCLFAVEQAQMKIRDNK 1795
Query: 83 TEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSL 142
++D I+ L C LP++ + EC + V++Y ++DM+ +F KP+ +C L LC
Sbjct: 1796 SKDNIKKVLNGLCSHLPNE-IKEECVDFVNTYSNELIDMLITDF-KPQEICVQLKLCPKT 1969
Query: 143 QKHLAAMKLQKQ-----LQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQKSKATEDVC 197
L +++ + + E+ F+++ S L P C
Sbjct: 1970 TYALWDLRISLEDDVDGEDKSSSEEISFNDIES-------LEELPPQLAFDPGFTAAPNC 2128
Query: 198 QDCIRLVTDVQEAVRTNATFVKSLVAHAKEE-CDRLGPGMSDMCKSYISEYSDLAIQMMM 256
C LV +++ + + T + + H EE CDR+ M+ C I +Y D +++
Sbjct: 2129 LICEELVKTLEKRMGKHPT--RDSIKHILEESCDRMRKPMNTKCHKVIDKYGDKIADLLL 2302
Query: 257 HMKDQQPKDICAMVGFC--PSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEIC 314
K+ PK IC +G C + + + + V+ + + ++++E C +C
Sbjct: 2303 --KEMDPKLICTELGMCILADLDDLEVDEALKYDVIALPRQDNKLSSSIKEPP--TCVLC 2470
Query: 315 ETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNP 374
E ++ ++ L++ +++I +E VC LPA+V+ QC F++ Y A++ +L + P
Sbjct: 2471 EFIMTKLDADLKNKTEQDDIKRAIEAVCNRLPATVRKQCDTFVDGYASAVLKLLSDVP-P 2647
Query: 375 EAVCVMLKCCAANXXXXXXXXXXXAGGFCDICKMIV-AYADKELEKNATTTEIEAL--LE 431
+ VC L+ C + C +C + A EK +E+ AL
Sbjct: 2648 KQVCQKLQLCFSVAVTDEVLE-------CGVCHGVTQALLPFLREKKDNVSEVTALQMTS 2806
Query: 432 KVCHFLPESVSDQCVQFVEQYEPVVVQLLAE-MMDPTFVCTKLGVCGAAKKPLL 484
C LP C + + Y + L +D + +C ++G C ++K L
Sbjct: 2807 VGCENLPAKYYKICSEMISIYGSSIKNLAKRPYIDQSHICAEIGKCFESEKSSL 2968
Score = 121 bits (304), Expect = 1e-25
Identities = 101/454 (22%), Positives = 187/454 (40%), Gaps = 41/454 (9%)
Frame = +2
Query: 64 CDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIK 123
C LC+ ++ + + L T+DEI+ +E C LP G+A +C+ V+ Y ++ ++
Sbjct: 1439 CTLCEYMLHFIQETLATPSTDDEIKHTVENICAKLP-SGVAGQCRNFVEMYGDAVIALLV 1615
Query: 124 EEFDKPEVVCSALSLCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQ 183
+ + P VC + +C +P+ + E+ +P A+ Q
Sbjct: 1616 QGLN-PRDVCPLMQMC-----------------PKNLPKKEDVEVFNPQPAS-----DEQ 1726
Query: 184 DKPKQKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSY 243
D P C C+ V Q +R N + ++ C L + + C +
Sbjct: 1727 DPP---------TCPLCLFAVEQAQMKIRDNKS-KDNIKKVLNGLCSHLPNEIKEECVDF 1876
Query: 244 ISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATV 303
++ YS+ I M+ + D +P++IC + CP L ++ E ++ +K++
Sbjct: 1877 VNTYSNELIDML--ITDFKPQEICVQLKLCPKT----TYALWDLRISLEDDVDGEDKSSS 2038
Query: 304 QEKTFS----------------------VCEICETMVKEVTGLLESNKTEEEIVHEMEVV 341
+E +F+ C ICE +VK + + + T + I H +E
Sbjct: 2039 EEISFNDIESLEELPPQLAFDPGFTAAPNCLICEELVKTLEKRMGKHPTRDSIKHILEES 2218
Query: 342 CYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCC----------------- 384
C + + +C I+ YG + D+LL+ +P+ +C L C
Sbjct: 2219 CDRMRKPMNTKCHKVIDKYGDKIADLLLKEMDPKLICTELGMCILADLDDLEVDEALKYD 2398
Query: 385 --AANXXXXXXXXXXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVS 442
A C +C+ I+ D +L+ +I+ +E VC+ LP +V
Sbjct: 2399 VIALPRQDNKLSSSIKEPPTCVLCEFIMTKLDADLKNKTEQDDIKRAIEAVCNRLPATVR 2578
Query: 443 DQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVC 476
QC FV+ Y V++LL++ + P VC KL +C
Sbjct: 2579 KQCDTFVDGYASAVLKLLSD-VPPKQVCQKLQLC 2677
Score = 121 bits (303), Expect = 2e-25
Identities = 81/331 (24%), Positives = 140/331 (41%), Gaps = 49/331 (14%)
Frame = +2
Query: 195 DVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQM 254
++C+ ++ + DV A T F + + K+ G D C S + +Y + +
Sbjct: 992 ELCEQLVKHLRDVLVANTTETEFKQVMEGFCKQS-----KGFKDECLSIVDQYYHVIYET 1156
Query: 255 MMHMKDQQPKDICAMVGFCP-----SVKSVPLQTLVPAQVVHEVKMETVEKATVQEKT-- 307
++ D C M+G C S+K VP+ L+P +VK+ T+EK EK
Sbjct: 1157 LVSKLDAN--GACCMIGICQKNSASSMKDVPIMPLLPVIEPAQVKI-TIEKLEKHEKKQL 1327
Query: 308 ------FS----------------------------VCEICETMVKEVTGLLESNKTEEE 333
FS +C +CE M+ + L + T++E
Sbjct: 1328 GASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGELCTLCEYMLHFIQETLATPSTDDE 1507
Query: 334 IVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXX 393
I H +E +C LP+ V QC++F+E+YG A+I +L++ NP VC +++ C N
Sbjct: 1508 IKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALLVQGLNPRDVCPLMQMCPKNLPKKED 1687
Query: 394 --------XXXXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQC 445
C +C V A ++ N + I+ +L +C LP + ++C
Sbjct: 1688 VEVFNPQPASDEQDPPTCPLCLFAVEQAQMKIRDNKSKDNIKKVLNGLCSHLPNEIKEEC 1867
Query: 446 VQFVEQYEPVVVQLLAEMMDPTFVCTKLGVC 476
V FV Y ++ +L P +C +L +C
Sbjct: 1868 VDFVNTYSNELIDMLITDFKPQEICVQLKLC 1960
Score = 57.4 bits (137), Expect = 3e-06
Identities = 25/79 (31%), Positives = 46/79 (57%), Gaps = 1/79 (1%)
Frame = +2
Query: 403 CDICKMIVAYADKELEKNATTTEIEALLEKVCHFLP-ESVSDQCVQFVEQYEPVVVQLLA 461
C ICK +V A +L+ N T E++ + E C +P + + +C++ + + P +V+ LA
Sbjct: 344 CTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLPELVEALA 523
Query: 462 EMMDPTFVCTKLGVCGAAK 480
M+P VC+ G+C +A+
Sbjct: 524 SQMNPDQVCSVAGLCNSAR 580
Score = 57.0 bits (136), Expect = 4e-06
Identities = 23/49 (46%), Positives = 27/49 (54%)
Frame = +2
Query: 469 VCTKLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
+C GV AA PLLG C WGP YWC N + +C A HC + VW
Sbjct: 164 LCCAFGVFAAAT-PLLGSSKCTWGPSYWCGNFSNSKECRATRHCIQTVW 307
>gb|AF145647.1|AF145647 Drosophila melanogaster clone GH08312 BcDNA.GH08312 (BcDNA.GH08312)
mRNA, complete cds
Length = 3448
Score = 127 bits (319), Expect = 3e-27
Identities = 97/376 (25%), Positives = 159/376 (41%), Gaps = 6/376 (1%)
Frame = +1
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSK---PAVNSIPCDLCKELVTVV 74
+P+L C GP WC + + +C A +HC Q VW P C +CK++VT
Sbjct: 184 TPLLGSSKCTWGPSYWCGNFSNSKECRATRHCIQTVWETQKVPVDTDSICTICKDMVTQA 363
Query: 75 GKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCS 134
LK N TE+E++ E +C+ +P + + EC ++ D +LP +++ + + + P+ VCS
Sbjct: 364 RDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLPELVEALASQMN-PDQVCS 540
Query: 135 ALSLCQSLQ-KHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQKSKAT 193
LC S + L +Q L E D SE T M +P Q S
Sbjct: 541 VAGLCNSARIDELYKNGIQAGLDGTVQNEDDSSEETELAM-----------QPNQLS--- 678
Query: 194 EDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEY-SDLAI 252
C +C L++ + + + AT +V C L SD C + + Y +D+
Sbjct: 679 ---CGNC-NLLSRLMHS-KFAATDRDDMVETMLHMCGSLS-SFSDACANIVLTYFNDIYD 840
Query: 253 QMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSV-C 311
+ H+ +C + G C S HE + + E + + C
Sbjct: 841 HVSKHLTTDA---VCHVSGVCAS-----------RYHQHEEEKQPQEALVALDAGDDIPC 978
Query: 312 EICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEA 371
E+CE +VK + +L +N TE E ME C KD+C ++ Y + + L+
Sbjct: 979 ELCEQLVKHLRDVLVANTTETEFKQVMEGFC-KQSKGFKDECLSIVDQYYHVIYETLVSK 1155
Query: 372 TNPEAVCVMLKCCAAN 387
+ C M+ C N
Sbjct: 1156LDANGACCMIGICQKN 1203
Score = 122 bits (305), Expect = 1e-25
Identities = 108/474 (22%), Positives = 200/474 (41%), Gaps = 24/474 (5%)
Frame = +1
Query: 35 QSLRTASQCGAVKHCQQNVWSKPAV---NSIP---------CDLCKELVTVVGKVLKDNG 82
Q L C ++ C +N+ K V N P C LC V ++DN
Sbjct: 1603 QGLNPRDVCPLMQMCPKNLPKKEDVEVFNPQPASDEQDPPTCPLCLFAVEQAQMKIRDNK 1782
Query: 83 TEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSL 142
++D I+ L C LP++ + EC + V++Y ++DM+ +F KP+ +C L LC
Sbjct: 1783 SKDNIKKVLNGLCSHLPNE-IKEECVDFVNTYSNELIDMLITDF-KPQEICVQLKLCPKT 1956
Query: 143 QKHLAAMKLQKQ-----LQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQKSKATEDVC 197
L +++ + + E+ F+++ S L P C
Sbjct: 1957 TYALWDLRISLEDDVDGEDKSSSEEISFNDIES-------LEELPPQLAFDPGFTAAPNC 2115
Query: 198 QDCIRLVTDVQEAVRTNATFVKSLVAHAKEE-CDRLGPGMSDMCKSYISEYSDLAIQMMM 256
C LV +++ + + T + + H EE CDR+ M+ C I +Y D +++
Sbjct: 2116 LICEELVKTLEKRMGKHPT--RDSIKHILEESCDRMRKPMNTKCHKVIDKYGDKIADLLL 2289
Query: 257 HMKDQQPKDICAMVGFC--PSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEIC 314
K+ PK IC +G C + + + + V+ + + ++++E C +C
Sbjct: 2290 --KEMDPKLICTELGMCILADLDDLEVDEALKYDVIALPRQDNKLSSSIKEPP--TCVLC 2457
Query: 315 ETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNP 374
E ++ ++ L++ +++I +E VC LPA+V+ QC F++ Y A++ +L + P
Sbjct: 2458 EFIMTKLDADLKNKTEQDDIKRAIEAVCNRLPATVRKQCDTFVDGYASAVLKLLSDVP-P 2634
Query: 375 EAVCVMLKCCAANXXXXXXXXXXXAGGFCDICKMIV-AYADKELEKNATTTEIEAL--LE 431
+ VC L+ C + C +C + A EK +E+ AL
Sbjct: 2635 KQVCQKLQLCFSVAVTDEVLE-------CGVCHGVTQALLPFLREKKDNVSEVTALQMTS 2793
Query: 432 KVCHFLPESVSDQCVQFVEQYEPVVVQLLAE-MMDPTFVCTKLGVCGAAKKPLL 484
C LP C + + Y + L +D + +C ++G C ++K L
Sbjct: 2794 VGCENLPAKYYKICSEMISIYGSSIKNLAKRPYIDQSHICAEIGKCFESEKSSL 2955
Score = 121 bits (304), Expect = 1e-25
Identities = 101/454 (22%), Positives = 187/454 (40%), Gaps = 41/454 (9%)
Frame = +1
Query: 64 CDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIK 123
C LC+ ++ + + L T+DEI+ +E C LP G+A +C+ V+ Y ++ ++
Sbjct: 1426 CTLCEYMLHFIQETLATPSTDDEIKHTVENICAKLP-SGVAGQCRNFVEMYGDAVIALLV 1602
Query: 124 EEFDKPEVVCSALSLCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQ 183
+ + P VC + +C +P+ + E+ +P A+ Q
Sbjct: 1603 QGLN-PRDVCPLMQMC-----------------PKNLPKKEDVEVFNPQPAS-----DEQ 1713
Query: 184 DKPKQKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSY 243
D P C C+ V Q +R N + ++ C L + + C +
Sbjct: 1714 DPP---------TCPLCLFAVEQAQMKIRDNKS-KDNIKKVLNGLCSHLPNEIKEECVDF 1863
Query: 244 ISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATV 303
++ YS+ I M+ + D +P++IC + CP L ++ E ++ +K++
Sbjct: 1864 VNTYSNELIDML--ITDFKPQEICVQLKLCPKT----TYALWDLRISLEDDVDGEDKSSS 2025
Query: 304 QEKTFS----------------------VCEICETMVKEVTGLLESNKTEEEIVHEMEVV 341
+E +F+ C ICE +VK + + + T + I H +E
Sbjct: 2026 EEISFNDIESLEELPPQLAFDPGFTAAPNCLICEELVKTLEKRMGKHPTRDSIKHILEES 2205
Query: 342 CYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCC----------------- 384
C + + +C I+ YG + D+LL+ +P+ +C L C
Sbjct: 2206 CDRMRKPMNTKCHKVIDKYGDKIADLLLKEMDPKLICTELGMCILADLDDLEVDEALKYD 2385
Query: 385 --AANXXXXXXXXXXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVS 442
A C +C+ I+ D +L+ +I+ +E VC+ LP +V
Sbjct: 2386 VIALPRQDNKLSSSIKEPPTCVLCEFIMTKLDADLKNKTEQDDIKRAIEAVCNRLPATVR 2565
Query: 443 DQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVC 476
QC FV+ Y V++LL++ + P VC KL +C
Sbjct: 2566 KQCDTFVDGYASAVLKLLSD-VPPKQVCQKLQLC 2664
Score = 121 bits (303), Expect = 2e-25
Identities = 81/331 (24%), Positives = 140/331 (41%), Gaps = 49/331 (14%)
Frame = +1
Query: 195 DVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQM 254
++C+ ++ + DV A T F + + K+ G D C S + +Y + +
Sbjct: 979 ELCEQLVKHLRDVLVANTTETEFKQVMEGFCKQS-----KGFKDECLSIVDQYYHVIYET 1143
Query: 255 MMHMKDQQPKDICAMVGFCP-----SVKSVPLQTLVPAQVVHEVKMETVEKATVQEKT-- 307
++ D C M+G C S+K VP+ L+P +VK+ T+EK EK
Sbjct: 1144 LVSKLDAN--GACCMIGICQKNSASSMKDVPIMPLLPVIEPAQVKI-TIEKLEKHEKKQL 1314
Query: 308 ------FS----------------------------VCEICETMVKEVTGLLESNKTEEE 333
FS +C +CE M+ + L + T++E
Sbjct: 1315 GASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGELCTLCEYMLHFIQETLATPSTDDE 1494
Query: 334 IVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXX 393
I H +E +C LP+ V QC++F+E+YG A+I +L++ NP VC +++ C N
Sbjct: 1495 IKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALLVQGLNPRDVCPLMQMCPKNLPKKED 1674
Query: 394 --------XXXXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQC 445
C +C V A ++ N + I+ +L +C LP + ++C
Sbjct: 1675 VEVFNPQPASDEQDPPTCPLCLFAVEQAQMKIRDNKSKDNIKKVLNGLCSHLPNEIKEEC 1854
Query: 446 VQFVEQYEPVVVQLLAEMMDPTFVCTKLGVC 476
V FV Y ++ +L P +C +L +C
Sbjct: 1855 VDFVNTYSNELIDMLITDFKPQEICVQLKLC 1947
Score = 57.4 bits (137), Expect = 3e-06
Identities = 25/79 (31%), Positives = 46/79 (57%), Gaps = 1/79 (1%)
Frame = +1
Query: 403 CDICKMIVAYADKELEKNATTTEIEALLEKVCHFLP-ESVSDQCVQFVEQYEPVVVQLLA 461
C ICK +V A +L+ N T E++ + E C +P + + +C++ + + P +V+ LA
Sbjct: 331 CTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLPELVEALA 510
Query: 462 EMMDPTFVCTKLGVCGAAK 480
M+P VC+ G+C +A+
Sbjct: 511 SQMNPDQVCSVAGLCNSAR 567
Score = 57.0 bits (136), Expect = 4e-06
Identities = 23/49 (46%), Positives = 27/49 (54%)
Frame = +1
Query: 469 VCTKLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
+C GV AA PLLG C WGP YWC N + +C A HC + VW
Sbjct: 151 LCCAFGVFAAAT-PLLGSSKCTWGPSYWCGNFSNSKECRATRHCIQTVW 294
>emb|X14778.1|RNSPB Rat mRNA for pulmonary surfactant-associated protein SP-B
Length = 1494
Score = 126 bits (317), Expect = 4e-27
Identities = 91/367 (24%), Positives = 166/367 (44%), Gaps = 5/367 (1%)
Frame = +1
Query: 25 DCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVLKDNGTE 84
DCA+GP+ WCQSL A QC A+ HC Q VW N + C C+++V ++ K+ K++ +
Sbjct: 91 DCAQGPKFWCQSLEQAIQCRALGHCLQEVWGHAGANDL-CQECEDIVHLLTKMTKEDAFQ 267
Query: 85 DEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQK 144
D IR +LE+ C+ LP + L C++++D YLP+++D + + KP+ +CS + LC Q
Sbjct: 268 DTIRKFLEQECDILPLKLLVPRCRQVLDVYLPLVIDYFQGQI-KPKAICSHVGLCPLGQ- 441
Query: 145 HLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLL---YPQDKPKQKSKATEDVCQDCI 201
QK + IP ++L P + L + QD +Q+ C C
Sbjct: 442 ---TKPEQKPEMLDAIPNPLLNKLVLPALPGAFLARPGPHTQDLSEQQLPIPLPFCWLCR 612
Query: 202 RLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMMHMKDQ 261
L+ VQ + L + C + + +C+ Y+ L + ++
Sbjct: 613 TLIKRVQAVIPKGV-----LAVAVSQVCHVVPLVVGGICQCLAERYTVLLLDALLGR--V 771
Query: 262 QPKDICAMVGFCPSVKSV--PLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEICETMVK 319
P+ +C +V C + ++ L L P +EK +Q+ + C C++++
Sbjct: 772 VPQLVCGLVLRCSTADAIGPALPALEP----------LIEKWPLQD---TECHFCKSVIN 912
Query: 320 EVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCV 379
+ N +E+ + M C + +C+ F+E + L+ ++ + + C
Sbjct: 913 QAW-----NTSEQAMPQAMHQACLRFWLD-RQKCEQFVEQHMPQLLALVPRSQDAHTSCQ 1074
Query: 380 MLKCCAA 386
L C A
Sbjct: 1075ALGVCEA 1095
Score = 75.1 bits (183), Expect = 2e-11
Identities = 75/317 (23%), Positives = 131/317 (40%), Gaps = 28/317 (8%)
Frame = +1
Query: 195 DVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMS-DMCKSYISEYSDLAIQ 253
D+CQ+C +V + + + +A F ++ ++ECD L + C+ + Y L I
Sbjct: 199 DLCQECEDIVHLLTKMTKEDA-FQDTIRKFLEQECDILPLKLLVPRCRQVLDVYLPLVID 375
Query: 254 MMMHMKDQQPKDICAMVGFCPSVKSVPLQT-----LVPAQVVHEVKMETVEKA------- 301
+PK IC+ VG CP ++ P Q +P +++++ + + A
Sbjct: 376 YFQGQI--KPKAICSHVGLCPLGQTKPEQKPEMLDAIPNPLLNKLVLPALPGAFLARPGP 549
Query: 302 ---TVQEKTFSV----CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCK 354
+ E+ + C +C T++K V ++ + + VC+++P V C+
Sbjct: 550 HTQDLSEQQLPIPLPFCWLCRTLIKRVQAVIPKGV----LAVAVSQVCHVVPLVVGGICQ 717
Query: 355 DFIEVYGQALIDMLLEATNPEAVC-VMLKCCAANXXXXXXXXXX-------XAGGFCDIC 406
E Y L+D LL P+ VC ++L+C A+ C C
Sbjct: 718 CLAERYTVLLLDALLGRVVPQLVCGLVLRCSTADAIGPALPALEPLIEKWPLQDTECHFC 897
Query: 407 KMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDP 466
K ++ A E+ +A L +L +C QFVEQ+ P ++ L+ D
Sbjct: 898 KSVINQAWNTSEQAMPQAMHQACLR---FWLDRQ---KCEQFVEQHMPQLLALVPRSQDA 1059
Query: 467 TFVCTKLGVCGAAKKPL 483
C LGVC A PL
Sbjct: 1060HTSCQALGVCEAPASPL 1110
Score = 44.7 bits (104), Expect = 0.022
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 477 GAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
GAA + D C GP +WC+++E A QC A+ HC + VW
Sbjct: 61 GAATESASSPD-CAQGPKFWCQSLEQAIQCRALGHCLQEVW 180
>ref|XM_087585.1| Homo sapiens LOC153061 (LOC153061), mRNA
Length = 994
Score = 124 bits (312), Expect = 2e-26
Identities = 59/166 (35%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Frame = +2
Query: 363 ALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXXA-----------GGFCDICKMIVA 411
+L+ ++ + T PE VC ++ C G FC+ CK ++
Sbjct: 233 SLVQLVAKIT-PEKVCKFIRLCGNRRRARAVHDAYAIVPSPEWDAENQGSFCNGCKRLLT 409
Query: 412 YADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCT 471
+ LE +T +I + C LP QC FV QYEPV+++ L +MMDP VC
Sbjct: 410 VSSHNLESKSTKRDILVAFKGGCSILPLPYMIQCKHFVTQYEPVLIESLKDMMDPVAVCK 589
Query: 472 KLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
K+G C + PLLG D C GP +WC++ E A CNAV HC++HVW
Sbjct: 590 KVGACHGPRTPLLGTDQCALGPSFWCRSQEAAKLCNAVQHCQKHVW 727
Score = 50.1 bits (118), Expect = 5e-04
Identities = 31/122 (25%), Positives = 52/122 (42%)
Frame = +2
Query: 263 PKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEICETMVKEVT 322
P+ +C + C + + A+ VH+ E S C C+ ++ +
Sbjct: 263 PEKVCKFIRLCGNRRR--------ARAVHDAYAIVPSPEWDAENQGSFCNGCKRLLTVSS 418
Query: 323 GLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLK 382
LES T+ +I+ + C +LP QCK F+ Y LI+ L + +P AVC +
Sbjct: 419 HNLESKSTKRDILVAFKGGCSILPLPYMIQCKHFVTQYEPVLIESLKDMMDPVAVCKKVG 598
Query: 383 CC 384
C
Sbjct: 599 AC 604
Score = 48.9 bits (115), Expect = 0.001
Identities = 18/39 (46%), Positives = 25/39 (63%)
Frame = +2
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSK 56
+P+L CA GP WC+S A C AV+HCQ++VW +
Sbjct: 617 TPLLGTDQCALGPSFWCRSQEAAKLCNAVQHCQKHVWKE 733
Score = 43.1 bits (100), Expect = 0.064
Identities = 24/76 (31%), Positives = 38/76 (49%)
Frame = +2
Query: 64 CDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIK 123
C+ CK L+TV L+ T+ +I + C LP + +CK V Y PV+++ +K
Sbjct: 383 CNGCKRLLTVSSHNLESKSTKRDILVAFKGGCSILPLPYMI-QCKHFVTQYEPVLIESLK 559
Query: 124 EEFDKPEVVCSALSLC 139
+ D P VC + C
Sbjct: 560 DMMD-PVAVCKKVGAC 604
>gb|AF154047.1|AF154047 Naegleria fowleri naegleriapore B pore-forming peptide precursor
(proNP-B) mRNA, complete cds
Length = 1513
Score = 118 bits (295), Expect = 2e-24
Identities = 112/445 (25%), Positives = 182/445 (40%), Gaps = 7/445 (1%)
Frame = +1
Query: 43 CGAVKHCQQN---VWSKPAVNSIPCDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLP 99
C VK C + V + A NS C++C+ LVT V ++ N T + LE+ C +P
Sbjct: 319 CSQVKICNGSAMAVAAPKAENSGICNMCQLLVTQVENWVESNDTIMTLEKKLEQVCSVIP 498
Query: 100 DQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQKHLAAMKLQKQLQSNK 159
Q ++ C V+ YLP+ + ++++F +C + LC S Q AA +Q+Q +
Sbjct: 499 GQ-YSALCTYAVEQYLPIFIHQVEKQFPAL-TICQDVHLCSSAQ---AAPVVQQQQAAEL 663
Query: 160 IPELDFSELTSPFMANVPLLLYPQDKPKQKSKATEDVCQDCIRLVTDVQEAVRTNATFVK 219
P +C+ + + V NA VK
Sbjct: 664 CP----------------------------------ICKAAVGFLKTKINNVDVNA--VK 735
Query: 220 SLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMMHMKDQQPKDICA-MVGFCPSVKS 278
+ A C C+ + D A Q+ ++ + + IC+ +V CP +
Sbjct: 736 QQLEFA---CSFF---QVPDCQQIV----DKAAQIAQDLQTEDAQTICSTVVDVCPKQQV 885
Query: 279 VPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEM 338
V K ++ K C C + K + L+ S+ T EI+
Sbjct: 886 VTFNPF---------------KKFLEAKDSKYCPTCLQITKYLEDLIVSDITVNEIIKLA 1020
Query: 339 EVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCC-AANXXXXXXXXXX 397
+ C L A ++ CK F+ + L +LLE P+ VC LK C AA
Sbjct: 1021DAGCARLGA-LESLCKKFVPLAVDELKKLLLEKLPPQKVCSTLKMCDAAELLKLALAPQA 1197
Query: 398 XAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVC-HFLPESVSDQCVQFVEQYEPVV 456
G C C+ +++ AD L N T ++ L+KVC F+P QC+ V QYE +
Sbjct: 1198ADGTMCLACEYVISVADNWLIANNTQQSVKNTLDKVCQEFVPSIYQSQCIALVNQYEAQL 1377
Query: 457 VQLL-AEMMDPTFVCTKLGVCGAAK 480
+QL +++ +P VC +GVC + K
Sbjct: 1378IQLFESKVFNPQTVCKAIGVCSSQK 1452
Score = 85.1 bits (209), Expect = 1e-14
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 1/181 (0%)
Frame = +1
Query: 301 ATVQ-EKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEV 359
ATVQ EK+ CEICE +V G + NKT+ +I E+ +C L + C + +
Sbjct: 94 ATVQAEKSVIGCEICEWLVATAEGFV--NKTKPQIEQELLQICAKL-GPYEQICDQLVLM 264
Query: 360 YGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXXAGGFCDICKMIVAYADKELEK 419
+ID ++ P VC +K C + +G C++C+++V + +E
Sbjct: 265 ELPDIIDQIIAKEPPAIVCSQVKICNGSAMAVAAPKAENSG-ICNMCQLLVTQVENWVES 441
Query: 420 NATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAA 479
N T +E LE+VC +P S C VEQY P+ + + + +C + +C +A
Sbjct: 442 NDTIMTLEKKLEQVCSVIPGQYSALCTYAVEQYLPIFIHQVEKQFPALTICQDVHLCSSA 621
Query: 480 K 480
+
Sbjct: 622 Q 624
>gb|M12710.1|HUMSHP1A Human sphingolipid activator protein mRNA
Length = 207
Score = 114 bits (286), Expect = 2e-23
Identities = 49/67 (73%), Positives = 63/67 (93%)
Frame = +1
Query: 195 DVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQM 254
DVCQDCI++VTD+Q AVRTN+TFV++LV H KEECDRLGPGM+D+CK+YIS+YS++AIQM
Sbjct: 4 DVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQM 183
Query: 255 MMHMKDQ 261
MMHM+ +
Sbjct: 184 MMHMQPE 204
>ref|XM_034120.2| Homo sapiens surfactant, pulmonary-associated protein B (SFTPB),
mRNA
Length = 1989
Score = 110 bits (275), Expect = 3e-22
Identities = 88/371 (23%), Positives = 160/371 (42%), Gaps = 12/371 (3%)
Frame = +1
Query: 26 CAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVLKDNGTED 85
CA+GPE WCQSL A QC A+ HC Q VW + + C C+++V ++ K+ K+ +D
Sbjct: 100 CAQGPEFWCQSLEQALQCRALGHCLQEVWGHVGADDL-CQECEDIVHILNKMAKEAIFQD 276
Query: 86 EIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQKH 145
+R +LE+ C LP + L +C +++D Y P+++D + + D +C L LC+S Q
Sbjct: 277 TMRKFLEQECNVLPLKLLMPQCNQVLDDYFPLVIDYFQNQTDS-NGICMHLGLCKSRQPE 453
Query: 146 LAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYP-----------QDKPKQKSKATE 194
Q+ S+ +P+ L P + + L + P QD +Q+
Sbjct: 454 ----PEQEPGMSDPLPKPLRDPLPDPLLDKLVLPVLPGALQARPGPHTQDLSEQQFPIPL 621
Query: 195 DVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMS-DMCKSYISEYSDLAIQ 253
C C L+ +Q A K +A A + R+ P ++ +C+ YS + +
Sbjct: 622 PYCWLCRALIKRIQ------AMIPKGALAVAVAQVCRVVPLVAGGICQCLAERYSVILLD 783
Query: 254 MMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEI 313
++ P+ +C +V C S ++ + + S C +
Sbjct: 784 TLLGR--MLPQLVCRLVLRCSMDDSAGPRSPTGEWLPRD----------------SECHL 909
Query: 314 CETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATN 373
C ++ + N +E+ I M C + +++CK F+E + L+ ++ +
Sbjct: 910 CMSVTTQA-----GNSSEQAIPQAMLQAC-VGSWLDREKCKQFVEQHTPQLLTLVPRGWD 1071
Query: 374 PEAVCVMLKCC 384
C L C
Sbjct: 1072AHTTCQALGVC 1104
Score = 70.9 bits (172), Expect = 3e-10
Identities = 67/331 (20%), Positives = 125/331 (37%), Gaps = 31/331 (9%)
Frame = +1
Query: 194 EDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGM-SDMCKSYISEYSDLAI 252
+D+CQ+C +V + + + A F ++ ++EC+ L + C + +Y L I
Sbjct: 202 DDLCQECEDIVHILNKMAK-EAIFQDTMRKFLEQECNVLPLKLLMPQCNQVLDDYFPLVI 378
Query: 253 QMMMHMKDQQPKDICAMVGFCPSVKSVP-------------LQTLVPAQVVHEVKMETVE 299
+ D IC +G C S + P L+ +P ++ ++ + +
Sbjct: 379 DYFQNQTDSN--GICMHLGLCKSRQPEPEQEPGMSDPLPKPLRDPLPDPLLDKLVLPVLP 552
Query: 300 KAT----------VQEKTFSV----CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLL 345
A + E+ F + C +C ++K + ++ + VC ++
Sbjct: 553 GALQARPGPHTQDLSEQQFPIPLPYCWLCRALIKRIQAMIPKGALAVAVAQ----VCRVV 720
Query: 346 PASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXX---AGGF 402
P C+ E Y L+D LL P+ VC ++ C+ +
Sbjct: 721 PLVAGGICQCLAERYSVILLDTLLGRMLPQLVCRLVLRCSMDDSAGPRSPTGEWLPRDSE 900
Query: 403 CDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAE 462
C +C + A E+ ++A + ++C QFVEQ+ P ++ L+
Sbjct: 901 CHLCMSVTTQAGNSSEQAIPQAMLQACVGSWLD------REKCKQFVEQHTPQLLTLVPR 1062
Query: 463 MMDPTFVCTKLGVCGAAKKPLLGDDACVWGP 493
D C LGVCG PL C+ P
Sbjct: 1063GWDAHTTCQALGVCGTMSSPL----QCIHSP 1143
Score = 45.1 bits (105), Expect = 0.017
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 488 ACVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
AC GP +WC+++E A QC A+ HC + VW
Sbjct: 97 ACAQGPEFWCQSLEQALQCRALGHCLQEVW 186
>gb|J02761.1|HUMPSPBA Human pulmonary surfactant-associated protein B (SP-B) mRNA,
complete cds
Length = 2026
Score = 110 bits (275), Expect = 3e-22
Identities = 88/371 (23%), Positives = 160/371 (42%), Gaps = 12/371 (3%)
Frame = +2
Query: 26 CAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVLKDNGTED 85
CA+GPE WCQSL A QC A+ HC Q VW + + C C+++V ++ K+ K+ +D
Sbjct: 107 CAQGPEFWCQSLEQALQCRALGHCLQEVWGHVGADDL-CQECEDIVHILNKMAKEAIFQD 283
Query: 86 EIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQKH 145
+R +LE+ C LP + L +C +++D Y P+++D + + D +C L LC+S Q
Sbjct: 284 TMRKFLEQECNVLPLKLLMPQCNQVLDDYFPLVIDYFQNQTDS-NGICMHLGLCKSRQPE 460
Query: 146 LAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYP-----------QDKPKQKSKATE 194
Q+ S+ +P+ L P + + L + P QD +Q+
Sbjct: 461 ----PEQEPGMSDPLPKPLRDPLPDPLLDKLVLPVLPGALQARPGPHTQDLSEQQFPIPL 628
Query: 195 DVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMS-DMCKSYISEYSDLAIQ 253
C C L+ +Q A K +A A + R+ P ++ +C+ YS + +
Sbjct: 629 PYCWLCRALIKRIQ------AMIPKGALAVAVAQVCRVVPLVAGGICQCLAERYSVILLD 790
Query: 254 MMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEI 313
++ P+ +C +V C S ++ + + S C +
Sbjct: 791 TLLGR--MLPQLVCRLVLRCSMDDSAGPRSPTGEWLPRD----------------SECHL 916
Query: 314 CETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATN 373
C ++ + N +E+ I M C + +++CK F+E + L+ ++ +
Sbjct: 917 CMSVTTQA-----GNSSEQAIPQAMLQAC-VGSWLDREKCKQFVEQHTPQLLTLVPRGWD 1078
Query: 374 PEAVCVMLKCC 384
C L C
Sbjct: 1079AHTTCQALGVC 1111
Score = 70.9 bits (172), Expect = 3e-10
Identities = 67/331 (20%), Positives = 125/331 (37%), Gaps = 31/331 (9%)
Frame = +2
Query: 194 EDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGM-SDMCKSYISEYSDLAI 252
+D+CQ+C +V + + + A F ++ ++EC+ L + C + +Y L I
Sbjct: 209 DDLCQECEDIVHILNKMAK-EAIFQDTMRKFLEQECNVLPLKLLMPQCNQVLDDYFPLVI 385
Query: 253 QMMMHMKDQQPKDICAMVGFCPSVKSVP-------------LQTLVPAQVVHEVKMETVE 299
+ D IC +G C S + P L+ +P ++ ++ + +
Sbjct: 386 DYFQNQTDSN--GICMHLGLCKSRQPEPEQEPGMSDPLPKPLRDPLPDPLLDKLVLPVLP 559
Query: 300 KAT----------VQEKTFSV----CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLL 345
A + E+ F + C +C ++K + ++ + VC ++
Sbjct: 560 GALQARPGPHTQDLSEQQFPIPLPYCWLCRALIKRIQAMIPKGALAVAVAQ----VCRVV 727
Query: 346 PASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXX---AGGF 402
P C+ E Y L+D LL P+ VC ++ C+ +
Sbjct: 728 PLVAGGICQCLAERYSVILLDTLLGRMLPQLVCRLVLRCSMDDSAGPRSPTGEWLPRDSE 907
Query: 403 CDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAE 462
C +C + A E+ ++A + ++C QFVEQ+ P ++ L+
Sbjct: 908 CHLCMSVTTQAGNSSEQAIPQAMLQACVGSWLD------REKCKQFVEQHTPQLLTLVPR 1069
Query: 463 MMDPTFVCTKLGVCGAAKKPLLGDDACVWGP 493
D C LGVCG PL C+ P
Sbjct: 1070GWDAHTTCQALGVCGTMSSPL----QCIHSP 1150
Score = 45.1 bits (105), Expect = 0.017
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 488 ACVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
AC GP +WC+++E A QC A+ HC + VW
Sbjct: 104 ACAQGPEFWCQSLEQALQCRALGHCLQEVW 193
>gb|AF033190.1|AF033190 Cavia porcellus surfactant protein-B mRNA, complete cds
Length = 2102
Score = 110 bits (274), Expect = 4e-22
Identities = 90/364 (24%), Positives = 156/364 (42%), Gaps = 5/364 (1%)
Frame = +3
Query: 26 CAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVLKDNGTED 85
C++GP+ WCQSL A QC A+ HC Q VW + + C C+++V ++ K+ K+ +
Sbjct: 105 CSQGPKFWCQSLEQALQCRALGHCLQEVWGHVGADDL-CQECEDIVRILTKMAKEVIFQK 281
Query: 86 EIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQKH 145
IR +LE+ C+ LP + L C ++++Y P+++D + P+ +C L LCQ Q
Sbjct: 282 TIRKFLERECDVLPLKLLVPRCHSVLETYFPLVIDYFQSHI-TPKTICWNLGLCQPRQPD 458
Query: 146 LAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYP----QDKPKQKSKATEDVCQDCI 201
N + E L P + L ++P QD +Q+ C+ C
Sbjct: 459 PQPEPGMPSPLPNSLSETSPDLLVPPRLPRA-LSVWPGPHTQDLSEQQFPIPLPYCRLCK 635
Query: 202 RLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMS-DMCKSYISEYSDLAIQMMMHMKD 260
L+ VQ A K ++A A + + P ++ +C+ Y+ L + + +
Sbjct: 636 TLLKRVQ------AMIPKGVLAMAVAQVCHVVPLVAGGICQCLAERYTVLLLDAL--LSH 791
Query: 261 QQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEICETMVKE 320
P+ +C +V C S L ++PA + E + S C++C ++
Sbjct: 792 LLPQLVCGLVLRCSMDNSAGL--VLPALSLSEGWL----------PQDSECDLCLSVTTR 935
Query: 321 VTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVM 380
N +E M C P + +CK F+E Y L+ + +P C
Sbjct: 936 AW-----NSSELARPQAMHQACLSSPLD-RQKCKQFVEQYTPQLLALEPRGGDPRTTCQA 1097
Query: 381 LKCC 384
L C
Sbjct: 1098LGVC 1109
Score = 82.8 bits (203), Expect = 7e-14
Identities = 79/324 (24%), Positives = 128/324 (39%), Gaps = 34/324 (10%)
Frame = +3
Query: 194 EDVCQDC---IRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMS-DMCKSYISEYSD 249
+D+CQ+C +R++T + + V F K++ + ECD L + C S + Y
Sbjct: 207 DDLCQECEDIVRILTKMAKEV----IFQKTIRKFLERECDVLPLKLLVPRCHSVLETYFP 374
Query: 250 LAIQMMMHMKDQQPKDICAMVGFCP------------------SVKSVPLQTLVPAQVVH 291
L I PK IC +G C S+ LVP ++
Sbjct: 375 LVIDYFQ--SHITPKTICWNLGLCQPRQPDPQPEPGMPSPLPNSLSETSPDLLVPPRLPR 548
Query: 292 EVKM-ETVEKATVQEKTFSV----CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLP 346
+ + + E+ F + C +C+T++K V ++ + VC+++P
Sbjct: 549 ALSVWPGPHTQDLSEQQFPIPLPYCRLCKTLLKRVQAMIPKGVLAMAVAQ----VCHVVP 716
Query: 347 ASVKDQCKDFIEVYGQALIDMLLEATNPEAVC-VMLKCCAANXXXXXXXXXXXAGGF--- 402
C+ E Y L+D LL P+ VC ++L+C N + G+
Sbjct: 717 LVAGGICQCLAERYTVLLLDALLSHLLPQLVCGLVLRCSMDNSAGLVLPALSLSEGWLPQ 896
Query: 403 ---CDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQL 459
CD+C + A N++ + + C P +C QFVEQY P ++ L
Sbjct: 897 DSECDLCLSVTTRA-----WNSSELARPQAMHQACLSSPLD-RQKCKQFVEQYTPQLLAL 1058
Query: 460 LAEMMDPTFVCTKLGVCGAAKKPL 483
DP C LGVC AK PL
Sbjct: 1059EPRGGDPRTTCQALGVCRGAKNPL 1130
Score = 44.3 bits (103), Expect = 0.029
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 488 ACVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
AC GP +WC+++E A QC A+ HC + VW
Sbjct: 102 ACSQGPKFWCQSLEQALQCRALGHCLQEVW 191
>gb|U17106.1|OCU17106 Oryctolagus cuniculus surfactant protein B (SP-B) mRNA, complete
cds
Length = 1747
Score = 109 bits (273), Expect = 6e-22
Identities = 90/376 (23%), Positives = 162/376 (42%), Gaps = 15/376 (3%)
Frame = +3
Query: 26 CAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVLKDNGTED 85
CA+GPE WCQSL A QC A+ HC Q VW + + C C+++V ++ K+ K+ +D
Sbjct: 102 CAQGPEFWCQSLEQALQCKALGHCLQEVWGHVGADDL-CQECQDIVNILTKMTKEAIFQD 278
Query: 86 EIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQKH 145
IR +LE C+ LP + L +C ++D Y P+ + + + + + +C L LCQ
Sbjct: 279 TIRKFLEHECDVLPLKLLVPQCHHVLDVYFPLTITYFQSQIN-AKAICQHLGLCQ----- 440
Query: 146 LAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLL---------YPQDKPKQKSKATEDV 196
+ P LD P +P LL + QD Q+ +
Sbjct: 441 ----------PGSPEPPLD----PLPDKLVLPTLLGALPAKPGPHTQDLSAQRFPIPLPL 578
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHA-KEECDRLGPGMSDMCKSYISEYSDLAIQMM 255
C C L+ +Q A K ++A A + C + + +C+ Y+ + ++++
Sbjct: 579 CWLCRTLLKRIQ------AMIPKGVLAMAVAQVCHVVPLVVGGICQRLAERYTVILLEVL 740
Query: 256 M-HMKDQQPKDICAMVGFCPSVKSV----PLQTLVPAQVVHEVKMETVEKATVQEKTFSV 310
+ H+ P+ +C +V C SV S+ P +P + + +
Sbjct: 741 LGHV---LPQLVCGLVLRCSSVDSIGQVPPTLEALPGEWLPQ---------------DPE 866
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
C +C ++ + + S +T + V+ L K +C+ F+E++ L+ +L
Sbjct: 867 CRLCMSVTTQARNI--SEQTRPQAVYH----ACLSSQLDKQECEQFVELHTPQLLSLLSR 1028
Query: 371 ATNPEAVCVMLKCCAA 386
+ A+C L C A
Sbjct: 1029GWDARAICQALGACVA 1076
Score = 70.1 bits (170), Expect = 5e-10
Identities = 71/321 (22%), Positives = 121/321 (37%), Gaps = 19/321 (5%)
Frame = +3
Query: 194 EDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMS-DMCKSYISEYSDLAI 252
+D+CQ+C +V + + + A F ++ + ECD L + C + Y L I
Sbjct: 204 DDLCQECQDIVNILTKMTK-EAIFQDTIRKFLEHECDVLPLKLLVPQCHHVLDVYFPLTI 380
Query: 253 QMMMHMKDQQPKDICAMVGFC-PSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFS-- 309
+ K IC +G C P PL L V+ + K + S
Sbjct: 381 TYFQSQINA--KAICQHLGLCQPGSPEPPLDPLPDKLVLPTLLGALPAKPGPHTQDLSAQ 554
Query: 310 -------VCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQ 362
+C +C T++K + ++ + VC+++P V C+ E Y
Sbjct: 555 RFPIPLPLCWLCRTLLKRIQAMIPKGVLAMAVAQ----VCHVVPLVVGGICQRLAERYTV 722
Query: 363 ALIDMLLEATNPEAVC-VMLKCCAANXXXXXXXXXXXAGGF-------CDICKMIVAYAD 414
L+++LL P+ VC ++L+C + + G C +C + A
Sbjct: 723 ILLEVLLGHVLPQLVCGLVLRCSSVDSIGQVPPTLEALPGEWLPQDPECRLCMSVTTQAR 902
Query: 415 KELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLG 474
E+ A L + +C QFVE + P ++ LL+ D +C LG
Sbjct: 903 NISEQTRPQAVYHACLSS------QLDKQECEQFVELHTPQLLSLLSRGWDARAICQALG 1064
Query: 475 VCGAAKKPLLGDDACVWGPGY 495
C A PL C+ P +
Sbjct: 1065ACVATLSPL----QCIQSPHF 1115
Score = 45.1 bits (105), Expect = 0.017
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 488 ACVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
AC GP +WC+++E A QC A+ HC + VW
Sbjct: 99 ACAQGPEFWCQSLEQALQCKALGHCLQEVW 188
>ref|NM_000542.1| Homo sapiens surfactant, pulmonary-associated protein B (SFTPB),
mRNA
Length = 1146
Score = 109 bits (272), Expect = 7e-22
Identities = 85/370 (22%), Positives = 155/370 (40%), Gaps = 11/370 (2%)
Frame = +1
Query: 26 CAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVLKDNGTED 85
CA+GPE WCQSL A QC A+ HC Q VW + + C C+++V ++ K+ K+ +D
Sbjct: 94 CAQGPEFWCQSLEQALQCRALGHCLQEVWGHVGADDL-CQECEDIVHILNKMAKEAIFQD 270
Query: 86 EIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQKH 145
+R +LE+ C LP + L +C +++D Y P+++D + + D +C L LC+S Q
Sbjct: 271 TMRKFLEQECNVLPLKLLMPQCNQVLDDYFPLVIDYFQNQIDS-NGICMHLGLCKSRQPE 447
Query: 146 LAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYP-----------QDKPKQKSKATE 194
Q+ S+ +P+ L P + + L + P QD +Q+
Sbjct: 448 ----PEQEPGMSDPLPKPLRDPLPDPLLDKLVLPVLPGALQARPGPHTQDLSEQQFPIPL 615
Query: 195 DVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQM 254
C C L+ +Q + A L + C + +C+ YS + +
Sbjct: 616 PYCWLCRALIKRIQAMIPKGA-----LRVAVAQVCRVVPLVAGGICQCLAERYSVILLDT 780
Query: 255 MMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEIC 314
++ P+ +C +V C S ++ + + S C +C
Sbjct: 781 LLGR--MLPQLVCRLVLRCSMDDSAGPRSPTGEWLPRD----------------SECHLC 906
Query: 315 ETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNP 374
++ + N +E+ I M C + +++CK F+E + L+ ++ +
Sbjct: 907 MSVTTQA-----GNSSEQAIPQAMLQAC-VGSWLDREKCKQFVEQHTPQLLTLVPRGWDA 1068
Query: 375 EAVCVMLKCC 384
C L C
Sbjct: 1069HTTCQALGVC 1098
Score = 70.5 bits (171), Expect = 4e-10
Identities = 67/331 (20%), Positives = 125/331 (37%), Gaps = 31/331 (9%)
Frame = +1
Query: 194 EDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGM-SDMCKSYISEYSDLAI 252
+D+CQ+C +V + + + A F ++ ++EC+ L + C + +Y L I
Sbjct: 196 DDLCQECEDIVHILNKMAK-EAIFQDTMRKFLEQECNVLPLKLLMPQCNQVLDDYFPLVI 372
Query: 253 QMMMHMKDQQPKDICAMVGFCPSVKSVP-------------LQTLVPAQVVHEVKMETVE 299
+ D IC +G C S + P L+ +P ++ ++ + +
Sbjct: 373 DYFQNQIDSN--GICMHLGLCKSRQPEPEQEPGMSDPLPKPLRDPLPDPLLDKLVLPVLP 546
Query: 300 KAT----------VQEKTFSV----CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLL 345
A + E+ F + C +C ++K + ++ + VC ++
Sbjct: 547 GALQARPGPHTQDLSEQQFPIPLPYCWLCRALIKRIQAMIPKGALRVAVAQ----VCRVV 714
Query: 346 PASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXX---AGGF 402
P C+ E Y L+D LL P+ VC ++ C+ +
Sbjct: 715 PLVAGGICQCLAERYSVILLDTLLGRMLPQLVCRLVLRCSMDDSAGPRSPTGEWLPRDSE 894
Query: 403 CDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAE 462
C +C + A E+ ++A + ++C QFVEQ+ P ++ L+
Sbjct: 895 CHLCMSVTTQAGNSSEQAIPQAMLQACVGSWLD------REKCKQFVEQHTPQLLTLVPR 1056
Query: 463 MMDPTFVCTKLGVCGAAKKPLLGDDACVWGP 493
D C LGVCG PL C+ P
Sbjct: 1057GWDAHTTCQALGVCGTMSSPL----QCIHSP 1137
Score = 45.1 bits (105), Expect = 0.017
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 488 ACVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
AC GP +WC+++E A QC A+ HC + VW
Sbjct: 91 ACAQGPEFWCQSLEQALQCRALGHCLQEVW 180
>gb|M15170.1|DOGSP18A Dog pulmonary surfactant protein 18 (SP 18) mRNA, partial cds
Length = 1442
Score = 105 bits (261), Expect = 1e-20
Identities = 82/360 (22%), Positives = 152/360 (41%), Gaps = 1/360 (0%)
Frame = +1
Query: 26 CAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVLKDNGTED 85
CA+GP WCQSL A QC A+ HC Q VW + + C C+++V ++ K+ K+ +D
Sbjct: 73 CARGPAFWCQSLEQALQCRALGHCLQEVWGNARADDL-CQECQDIVRILTKMTKEAIFQD 249
Query: 86 EIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQKH 145
+R +LE C+ LP + L +C ++ +Y PV++D + + + P+++C L LC +
Sbjct: 250 MVRKFLEHECDVLPLKLLTPQCHHMLGTYFPVVVDYFQSQIN-PKIICKHLGLC---KPG 417
Query: 146 LAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQKSKATEDVCQDCIRLVT 205
L + + +L + +L EL P + QD +Q+ C C L+
Sbjct: 418 LPEPEQESELSDPLLDKLILPELPGALQVTGP---HTQDLSEQQLPIPLPYCWLCRTLIK 588
Query: 206 DVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMMHMKDQQPKD 265
+Q + L + C + + +C+ Y+ L + ++ P+
Sbjct: 589 RIQAMIPKGV-----LAVTVGQVCHVVPLVVGGICQCLGERYTVLLLDALLGR--MLPQL 747
Query: 266 ICAMVGFCPSVKSV-PLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEICETMVKEVTGL 324
+C +V C S P +P++ + QE S C++C + +
Sbjct: 748 VCGLVLRCSHEDSAGPALASLPSE------------WSPQE---SKCQLCMFVTTQA--- 873
Query: 325 LESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCC 384
N +E+ + C L + +C+ F+E + L + + C L C
Sbjct: 874 --GNHSEQATPQAIRQAC-LSSWLDRQKCEQFVEQHMPRLQTLASGGRDAHTTCQALGAC 1044
Score = 61.2 bits (147), Expect = 2e-07
Identities = 65/310 (20%), Positives = 114/310 (35%), Gaps = 20/310 (6%)
Frame = +1
Query: 194 EDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGM-SDMCKSYISEYSDLAI 252
+D+CQ+C +V + + + A F + + ECD L + + C + Y + +
Sbjct: 175 DDLCQECQDIVRILTKMTK-EAIFQDMVRKFLEHECDVLPLKLLTPQCHHMLGTYFPVVV 351
Query: 253 QMMMHMKDQQPKDICAMVGFCPSVKSVP----------LQTLVPAQVVHEVKMETVEKAT 302
+ PK IC +G C P L L+ ++ +++
Sbjct: 352 DYFQSQIN--PKIICKHLGLCKPGLPEPEQESELSDPLLDKLILPELPGALQVTGPHTQD 525
Query: 303 VQEKTFSV----CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIE 358
+ E+ + C +C T++K + ++ + VC+++P V C+ E
Sbjct: 526 LSEQQLPIPLPYCWLCRTLIKRIQAMIPKGVLAVTVGQ----VCHVVPLVVGGICQCLGE 693
Query: 359 VYGQALIDMLLEATNPEAVC-VMLKCC----AANXXXXXXXXXXXAGGFCDICKMIVAYA 413
Y L+D LL P+ VC ++L+C A C +C + A
Sbjct: 694 RYTVLLLDALLGRMLPQLVCGLVLRCSHEDSAGPALASLPSEWSPQESKCQLCMFVTTQA 873
Query: 414 DKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKL 473
E+ +A L +C QFVEQ+ P + L + D C L
Sbjct: 874 GNHSEQATPQAIRQACLSSWLD------RQKCEQFVEQHMPRLQTLASGGRDAHTTCQAL 1035
Query: 474 GVCGAAKKPL 483
G C PL
Sbjct: 1036GACRTTFSPL 1065
Score = 45.4 bits (106), Expect = 0.013
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 488 ACVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
AC GP +WC+++E A QC A+ HC + VW
Sbjct: 70 ACARGPAFWCQSLEQALQCRALGHCLQEVW 159
Score = 42.4 bits (98), Expect = 0.11
Identities = 26/97 (26%), Positives = 39/97 (39%), Gaps = 1/97 (1%)
Frame = +1
Query: 381 LKCCAANXXXXXXXXXXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLP-E 439
L+C A A C C+ IV K ++ + LE C LP +
Sbjct: 118 LQCRALGHCLQEVWGNARADDLCQECQDIVRILTKMTKEAIFQDMVRKFLEHECDVLPLK 297
Query: 440 SVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVC 476
++ QC + Y PVVV ++P +C LG+C
Sbjct: 298 LLTPQCHHMLGTYFPVVVDYFQSQINPKIICKHLGLC 408
>gb|BC014989.1|BC014989 Homo sapiens, Similar to phospholipid scramblase 3, clone MGC:23223
IMAGE:4907002, mRNA, complete cds
Length = 3105
Score = 104 bits (260), Expect = 2e-20
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = +1
Query: 461 AEMMDPTFVCTKLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
+ +MDP+FVC K+G C +A KPLLG + C+WGP YWC+N ETAAQCNAV+HC+RHVWN
Sbjct: 1765 SSLMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNTETAAQCNAVEHCKRHVWN 1938
Score = 50.8 bits (120), Expect = 3e-04
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +1
Query: 19 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWS 55
P+L + C GP WCQ+ TA+QC AV+HC+++VW+
Sbjct: 1828 PLLGTEKCIWGPSYWCQNTETAAQCNAVEHCKRHVWN 1938
>gb|AF196309.1|AF196309 Naegleria fowleri naegleriapore B precursor (NP-B) gene, partial
cds
Length = 1693
Score = 103 bits (256), Expect = 5e-20
Identities = 101/428 (23%), Positives = 169/428 (38%), Gaps = 4/428 (0%)
Frame = +2
Query: 57 PAVNSIPCDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLP 116
P N L + + + ++ N T + LE+ C +P Q ++ C V+ YLP
Sbjct: 572 PTQNPTTITLHRISIHITENWVESNDTIMTLEKKLEQVCSVIPGQ-YSALCTYAVEQYLP 748
Query: 117 VIMDMIKEEFDKPEVVCSALSLCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANV 176
+ + ++++F +C + LC S Q AA +Q+Q + P
Sbjct: 749 IFIHQVEKQFPAL-TICQDVHLCSSAQ---AAPVVQQQQAAELCP--------------- 871
Query: 177 PLLLYPQDKPKQKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGM 236
+C+ + + V NA VK + A C
Sbjct: 872 -------------------ICKAAVGFLKTKINNVDVNA--VKQQLEFA---CSFF---Q 970
Query: 237 SDMCKSYISEYSDLAIQMMMHMKDQQPKDICA-MVGFCPSVKSVPLQTLVPAQVVHEVKM 295
C+ + D A Q+ ++ + + IC+ +V CP + V
Sbjct: 971 VPDCQQIV----DKAAQIAQDLQTEDAQTICSTVVDVCPKQQVVTFNPF----------- 1105
Query: 296 ETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKD 355
K ++ K C C + K + L+ S+ T EI+ + C L A ++ CK
Sbjct: 1106----KKFLEAKDSKYCPTCLQITKYLEDLIVSDITVNEIIKLADAGCARLGA-LESLCKK 1270
Query: 356 FIEVYGQALIDMLLEATNPEAVCVMLKCC-AANXXXXXXXXXXXAGGFCDICKMIVAYAD 414
F+ + L +LLE P+ VC LK C AA G C C+ +++ AD
Sbjct: 1271FVPLAVDELKKLLLEKLPPQKVCSTLKMCDAAELLKLALAPQAADGTMCLACEYVISVAD 1450
Query: 415 KELEKNATTTEIEALLEKVC-HFLPESVSDQCVQFVEQYEPVVVQLL-AEMMDPTFVCTK 472
L N T ++ L+KVC F+P QC+ V QYE ++QL +++ +P VC
Sbjct: 1451NWLIANNTQQSVKNTLDKVCQEFVPSIYQSQCIALVNQYEAQLIQLFESKVFNPQTVCKA 1630
Query: 473 LGVCGAAK 480
+GVC + K
Sbjct: 1631IGVCSSQK 1654
Score = 47.0 bits (110), Expect = 0.004
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Frame = +2
Query: 43 CGAVKHCQQNVWSK-----PAVNSIPCDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEF 97
C +K C K A + C C+ +++V L N T+ +++ L+K C+
Sbjct: 1337 CSTLKMCDAAELLKLALAPQAADGTMCLACEYVISVADNWLIANNTQQSVKNTLDKVCQE 1516
Query: 98 LPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQS 141
S+C +V+ Y ++ + + + P+ VC A+ +C S
Sbjct: 1517 FVPSIYQSQCIALVNQYEAQLIQLFESKVFNPQTVCKAIGVCSS 1648
>gb|AF107544.1|AF107544 Ovis aries pulmonary surfactant-associated protein B (SP-B) mRNA,
partial cds
Length = 1660
Score = 103 bits (256), Expect = 5e-20
Identities = 83/375 (22%), Positives = 155/375 (41%), Gaps = 15/375 (4%)
Frame = +1
Query: 26 CAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVLKDNGTED 85
CA+GP WCQSL A QC A+ HC Q VW + + C C+ + ++ K+ K+ +D
Sbjct: 94 CAQGPTFWCQSLEQALQCRALGHCLQEVWGHAEADDL-CQECENISRILTKMAKEAIFQD 270
Query: 86 EIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQKH 145
+R +LE+ C+ LP + L +C+ ++D+Y P+I+D + + + P+ +C + LC+
Sbjct: 271 TVRKFLEQECDVLPLKLLVPQCRHLLDTYFPLIIDHFQSQMN-PKFICQHVGLCK----- 432
Query: 146 LAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYP-----------QDKPKQKSKATE 194
+ + K P E P + + L L P QD +Q+
Sbjct: 433 ------PRHPEPGKGP-----EPWGPLLDKMALPLLPGALQAKPGPQTQDLSQQRFPIPL 579
Query: 195 DVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQM 254
C C L+ +Q + L + C + + +C+ + YS + +
Sbjct: 580 PFCWLCRTLIKRIQAVIPKGV-----LAMTVAQVCHVVPLLVGGICQCLVERYSVILLDT 744
Query: 255 MMHMKDQQPKDICAMVGFCPSVKS----VPLQTLVPAQVVHEVKMETVEKATVQEKTFSV 310
++ P+ +C +V C S S +P +P + + + S
Sbjct: 745 LLGR--MLPQLVCGLVLRCSSEDSAGPALPALGSLPGEWLPQ---------------DSE 873
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
C++C + + N +E+ + M C L + +C+ F+E + L ++
Sbjct: 874 CQLCMFVTTQA-----GNSSEQAMPQAMRQAC-LGTWLDRQKCEQFVEEHAPRLQTLVSS 1035
Query: 371 ATNPEAVCVMLKCCA 385
+ C L CA
Sbjct: 1036GWDAHMACQALGTCA 1080
Score = 71.2 bits (173), Expect = 2e-10
Identities = 72/327 (22%), Positives = 122/327 (37%), Gaps = 25/327 (7%)
Frame = +1
Query: 194 EDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMS-DMCKSYISEYSDLAI 252
+D+CQ+C ++ + + A F ++ ++ECD L + C+ + Y L I
Sbjct: 196 DDLCQECEN-ISRILTKMAKEAIFQDTVRKFLEQECDVLPLKLLVPQCRHLLDTYFPLII 372
Query: 253 QMMMHMKDQQ-PKDICAMVGFC------PSVKSVPLQTLVPAQVVHEVKMETVEKATVQE 305
H + Q PK IC VG C P P L+ + + K Q
Sbjct: 373 D---HFQSQMNPKFICQHVGLCKPRHPEPGKGPEPWGPLLDKMALPLLPGALQAKPGPQT 543
Query: 306 KTFS---------VCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDF 356
+ S C +C T++K + ++ + VC+++P V C+
Sbjct: 544 QDLSQQRFPIPLPFCWLCRTLIKRIQAVIPKGVLAMTVAQ----VCHVVPLLVGGICQCL 711
Query: 357 IEVYGQALIDMLLEATNPEAVC-VMLKCCAANXXXXXXXXXXXAGGF-------CDICKM 408
+E Y L+D LL P+ VC ++L+C + + G C +C
Sbjct: 712 VERYSVILLDTLLGRMLPQLVCGLVLRCSSEDSAGPALPALGSLPGEWLPQDSECQLCMF 891
Query: 409 IVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTF 468
+ A E+ +A L +C QFVE++ P + L++ D
Sbjct: 892 VTTQAGNSSEQAMPQAMRQACLGTWLD------RQKCEQFVEEHAPRLQTLVSSGWDAHM 1053
Query: 469 VCTKLGVCGAAKKPLLGDDACVWGPGY 495
C LG C PL C+ P +
Sbjct: 1054ACQALGTCATPFSPL----QCIHSPHF 1122
Score = 45.4 bits (106), Expect = 0.013
Identities = 28/114 (24%), Positives = 46/114 (39%), Gaps = 1/114 (0%)
Frame = +1
Query: 381 LKCCAANXXXXXXXXXXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLP-E 439
L+C A A C C+ I K ++ + LE+ C LP +
Sbjct: 139 LQCRALGHCLQEVWGHAEADDLCQECENISRILTKMAKEAIFQDTVRKFLEQECDVLPLK 318
Query: 440 SVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDACVWGP 493
+ QC ++ Y P+++ M+P F+C +G+C + P G WGP
Sbjct: 319 LLVPQCRHLLDTYFPLIIDHFQSQMNPKFICQHVGLC-KPRHPEPGKGPEPWGP 477
Score = 43.5 bits (101), Expect = 0.049
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 489 CVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
C GP +WC+++E A QC A+ HC + VW
Sbjct: 94 CAQGPTFWCQSLEQALQCRALGHCLQEVW 180
>gb|U66367.1|DDU66367 Dictyostelium discoideum SapA (sapA) mRNA, partial cds
Length = 1390
Score = 99.4 bits (246), Expect = 8e-19
Identities = 60/240 (25%), Positives = 114/240 (47%), Gaps = 1/240 (0%)
Frame = +2
Query: 240 CKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVE 299
C I+ Y L ++++++ + P+++C M+ C S + + V EV + VE
Sbjct: 26 CVEIINNYGVLMVRLLINR--ESPENVCLMMELCSKSSSELIMPINVVAVGDEV--DNVE 193
Query: 300 KATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPA-SVKDQCKDFIE 358
+ C +CE + +++ LE+N+TE +I+ ++ C LL + + C++ I+
Sbjct: 194 GS-------GECLVCEFISEKIVTYLEANQTETQILQYLDNDCKLLKSDNWISTCQNLIQ 352
Query: 359 VYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXXAGGFCDICKMIVAYADKELE 418
Y +I ++ P +C +K C+++ + C+IC I YA+ LE
Sbjct: 353 EYEPQIIAVVEGFMAPSELCQKIKFCSSSSSTNDFDFIGSSTTDCEICTFISGYAENFLE 532
Query: 419 KNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGA 478
+N T +I +++ C LP + CV Y P ++++L P VC KL +C A
Sbjct: 533 ENKTLEDIIKVVDDFCKILPAAYKTDCVAMASNYIPAIIKMLENDNSPGQVCQKLNLCPA 712
Score = 96.7 bits (239), Expect = 5e-18
Identities = 90/381 (23%), Positives = 142/381 (36%), Gaps = 3/381 (0%)
Frame = +2
Query: 104 ASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQKHLAAMKLQKQLQSNKIPEL 163
A +C EI+++Y V+M + + PE VC + LC
Sbjct: 17 AQDCVEIINNY-GVLMVRLLINRESPENVCLMMELCSKSS-------------------- 133
Query: 164 DFSELTSPFMANVPLLLYPQDKPKQKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLVA 223
SEL P NV + D + + VC+ + EA +T ++ L
Sbjct: 134 --SELIMPI--NVVAVGDEVDNVEGSGECL--VCEFISEKIVTYLEANQTETQILQYL-- 289
Query: 224 HAKEECDRL-GPGMSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQ 282
+C L C++ I EY I ++ P ++C + FC S S
Sbjct: 290 --DNDCKLLKSDNWISTCQNLIQEYEPQIIAVVEGF--MAPSELCQKIKFCSSSSSTN-- 451
Query: 283 TLVPAQVVHEVKMETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVC 342
+ + +T CEIC + LE NKT E+I+ ++ C
Sbjct: 452 -----------DFDFIGSSTTD------CEICTFISGYAENFLEENKTLEDIIKVVDDFC 580
Query: 343 YLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXXAGGF 402
+LPA+ K C Y A+I ML +P VC L C A
Sbjct: 581 KILPAAYKTDCVAMASNYIPAIIKMLENDNSPGQVCQKLNLCPAPTPTSTPSTIKIDVNI 760
Query: 403 --CDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLL 460
C+IC+ ++ +A+K L + ++ L+ C+ LP V D C + V +Y V L
Sbjct: 761 NKCEICETVIGFAEKYLGSALDSQTVKTFLQNECNKLPGVVGDVCNEVVNEYLEFAVTQL 940
Query: 461 AEMMDPTFVCTKLGVCGAAKK 481
+PT +C C A +
Sbjct: 941 EAKFNPTEICQLFSFCTAGSE 1003
Score = 64.7 bits (156), Expect = 2e-08
Identities = 65/362 (17%), Positives = 134/362 (36%), Gaps = 5/362 (1%)
Frame = +2
Query: 43 CGAVKHCQQ----NVWSKPAVNSIPCDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFL 98
C +K C N + ++ C++C + L++N T ++I ++ C+ L
Sbjct: 410 CQKIKFCSSSSSTNDFDFIGSSTTDCEICTFISGYAENFLEENKTLEDIIKVVDDFCKIL 589
Query: 99 PDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQKHLAAMKLQKQLQSN 158
P ++C + +Y+P I+ M++ + + P VC L+LC + ++ + N
Sbjct: 590 P-AAYKTDCVAMASNYIPAIIKMLEND-NSPGQVCQKLNLCPAPTPTSTPSTIKIDVNIN 763
Query: 159 KIPELDFSELTSPFMANVPLLLYPQDKPKQKSKATEDVCQDCIRLVTDVQEAVRTNATFV 218
K C+ C V E +A
Sbjct: 764 K-------------------------------------CEIC-ETVIGFAEKYLGSALDS 829
Query: 219 KSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKS 278
+++ + EC++L + D+C ++EY + A+ + P +IC + FC +
Sbjct: 830 QTVKTFLQNECNKLPGVVGDVCNEVVNEYLEFAVTQL--EAKFNPTEICQLFSFCTAGSE 1003
Query: 279 VPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEM 338
+ E+K + ++ C+ICE + V + + N T ++
Sbjct: 1004--------SSDASEIK--------INNNSYIDCQICEVLANFV--VYDKNYT-THFEDKL 1126
Query: 339 EVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEA-VCVMLKCCAANXXXXXXXXXX 397
+C L S+ + C +F+ YG L ++++ A C + C +
Sbjct: 1127NKLCSCLSRSLIEPCLNFVSQYGSDLEQIIVQGGESAAEACNQIAQCPTSSSSSYSGSAS 1306
Query: 398 XA 399
A
Sbjct: 1307GA 1312
Score = 63.9 bits (154), Expect = 4e-08
Identities = 36/146 (24%), Positives = 65/146 (43%), Gaps = 11/146 (7%)
Frame = +2
Query: 345 LPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXXA----- 399
LP C + I YG ++ +L+ +PE VC+M++ C+ + A
Sbjct: 2 LPKEYAQDCVEIINNYGVLMVRLLINRESPENVCLMMELCSKSSSELIMPINVVAVGDEV 181
Query: 400 -----GGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFL-PESVSDQCVQFVEQYE 453
G C +C+ I LE N T T+I L+ C L ++ C +++YE
Sbjct: 182 DNVEGSGECLVCEFISEKIVTYLEANQTETQILQYLDNDCKLLKSDNWISTCQNLIQEYE 361
Query: 454 PVVVQLLAEMMDPTFVCTKLGVCGAA 479
P ++ ++ M P+ +C K+ C ++
Sbjct: 362 PQIIAVVEGFMAPSELCQKIKFCSSS 439
>gb|M24901.1|RABSPBA Rabbit pulmonary surfactant-associated protein (SP-B) mRNA,
complete cds
Length = 1705
Score = 96.3 bits (238), Expect = 6e-18
Identities = 71/265 (26%), Positives = 121/265 (44%), Gaps = 11/265 (4%)
Frame = +3
Query: 26 CAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVLKDNGTED 85
CA+GPE WCQSL A QC A+ HC Q VW + + C C+++V ++ K+ K+ +D
Sbjct: 105 CAQGPEFWCQSLEQALQCKALGHCLQEVWGHVGADDL-CQECQDIVNILTKMTKEAIFQD 281
Query: 86 EIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQKH 145
IR +LE C+ LP + L +C ++D Y P+ + + + + + +C L LCQ
Sbjct: 282 TIRKFLEHECDVLPLKLLVPQCHHVLDVYFPLTITYFQSQIN-AKAICQHLGLCQ----- 443
Query: 146 LAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLL---------YPQDKPKQKSKATEDV 196
+ P LD P +P LL + QD Q +
Sbjct: 444 ----------PGSPEPPLD----PLPDKLVLPTLLGALPAKPGPHTQDLSAQPFPIPLPL 581
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHA-KEECDRLGPGMSDMCKSYISEYSDLAIQMM 255
C C L+ +Q A K ++A A + C + + +C+ Y+ + ++++
Sbjct: 582 CWLCRTLLKRIQ------AMIPKGVLAMAVAQVCHVVPLVVGGICQCLAERYTVILLEVL 743
Query: 256 M-HMKDQQPKDICAMVGFCPSVKSV 279
+ H+ P+ +C +V C SV S+
Sbjct: 744 LGHV---LPQLVCGLVLRCSSVDSI 809
Score = 45.1 bits (105), Expect = 0.017
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 488 ACVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
AC GP +WC+++E A QC A+ HC + VW
Sbjct: 102 ACAQGPEFWCQSLEQALQCKALGHCLQEVW 191
Score = 36.6 bits (83), Expect = 6.0
Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
Frame = +3
Query: 371 ATNPEAVCVMLK----CCAANXXXXXXXXXXXAGGFCDICKMIVAYADKELEKNATTTEI 426
A PE C L+ C A A C C+ IV K ++ I
Sbjct: 108 AQGPEFWCQSLEQALQCKALGHCLQEVWGHVGADDLCQECQDIVNILTKMTKEAIFQDTI 287
Query: 427 EALLEKVCHFLP-ESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVC--GAAKKPL 483
LE C LP + + QC ++ Y P+ + ++ +C LG+C G+ + PL
Sbjct: 288 RKFLEHECDVLPLKLLVPQCHHVLDVYFPLTITYFQSQINAKAICQHLGLCQPGSPEPPL 467
>gb|M86181.1|HUMPSAPA Human prosaposin (PSAP) gene
Length = 19985
Score = 95.9 bits (237), Expect = 8e-18
Identities = 44/70 (62%), Positives = 54/70 (76%)
Frame = +1
Query: 120 DMIKEEFDKPEVVCSALSLCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLL 179
D +P VCSAL+LC+SLQKHLA + QKQL+SNKIPELD +E+ +PFMAN+PLL
Sbjct: 7183 DFFPSHQSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLL 7362
Query: 180 LYPQDKPKQK 189
LYPQD P+ K
Sbjct: 7363 LYPQDGPRSK 7392
Score = 80.1 bits (196), Expect = 5e-13
Identities = 34/45 (75%), Positives = 42/45 (92%)
Frame = +1
Query: 195 DVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDM 239
DVCQDCI++VTD+Q AVRTN+TFV++LV H KEECDRLGPGM+D+
Sbjct: 8131 DVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADI 8265
Score = 66.2 bits (160), Expect = 7e-09
Identities = 27/43 (62%), Positives = 33/43 (75%)
Frame = +2
Query: 19 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNS 61
PVL K+C +G VWCQ+++TAS CGAVKHC Q VW+KP V S
Sbjct: 1799 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVVS 1927
Score = 65.1 bits (157), Expect = 2e-08
Identities = 24/36 (66%), Positives = 29/36 (79%)
Frame = +1
Query: 472 KLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCN 507
K+G C +A KPLLG + C+WGP YWC+N ETAAQCN
Sbjct: 17542 KIGACPSAHKPLLGTEKCIWGPSYWCQNTETAAQCN 17649
Score = 59.3 bits (142), Expect = 9e-07
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +1
Query: 85 DEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEE 125
+EI YLEKTC++LP +++ CKEIVDSYLPVI+D+IK E
Sbjct: 5032 EEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGE 5154
Score = 57.8 bits (138), Expect = 3e-06
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +2
Query: 400 GGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQ 444
GGFC++CK +V Y D+ LEKN+T EI A LEK C FLP+ Q
Sbjct: 16667 GGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQ 16801
Score = 55.1 bits (131), Expect = 2e-05
Identities = 24/73 (32%), Positives = 40/73 (53%)
Frame = +1
Query: 425 EIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLL 484
EI +K+C LP+S+S++C + V+ Y ++ +L E + P VC+ L +C + P L
Sbjct: 16369 EILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTRLPAL 16548
Query: 485 GDDACVWGPGYWC 497
+ VW WC
Sbjct: 16549 TGERWVWCGRGWC 16587
Score = 52.0 bits (123), Expect = 1e-04
Identities = 19/55 (34%), Positives = 37/55 (66%)
Frame = +1
Query: 331 EEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCA 385
++EI+ + +C LP S+ ++C++ ++ YG +++ +LLE +PE VC ML C+
Sbjct: 16363 QKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCS 16527
Score = 51.2 bits (121), Expect = 2e-04
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2
Query: 261 QQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVE 299
QQPK+ICA+VGFC VK +P+QTLVPA+V + + +E
Sbjct: 14258 QQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALE 14374
Score = 48.9 bits (115), Expect = 0.001
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +2
Query: 462 EMMDPTFVCTKLG------VCGAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRH 515
E+ VC K+G A P+LG C G WC+N++TA+ C AV HC +
Sbjct: 1721 EISQVDLVCYKMGHLLTLVFILALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQT 1900
Query: 516 VWN 518
VWN
Sbjct: 1901 VWN 1909
Score = 45.4 bits (106), Expect = 0.013
Identities = 24/56 (42%), Positives = 35/56 (61%)
Frame = +1
Query: 84 EDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLC 139
+ EI +K C LP + L+ EC+E+VD+Y I+ ++ EE PE+VCS L LC
Sbjct: 16363 QKEILDAFDKMCSKLP-KSLSEECQEVVDTYGSSILSILLEEV-SPELVCSMLHLC 16524
Score = 44.7 bits (104), Expect = 0.022
Identities = 19/35 (54%), Positives = 27/35 (76%), Gaps = 2/35 (5%)
Frame = +2
Query: 445 CVQFVEQYEPVVVQLLAEMMDPTFVC--TKLGVCG 477
C QFV +YEPV++++L E+MDP+FVC + G CG
Sbjct: 17156 CDQFVAEYEPVLIEILVEVMDPSFVCLVSLTGWCG 17260
Score = 42.0 bits (97), Expect = 0.14
Identities = 18/37 (48%), Positives = 26/37 (69%)
Frame = +2
Query: 64 CDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPD 100
C++CK+LV + + L+ N T+ EI + LEK C FLPD
Sbjct: 16676 CEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPD 16786
Score = 40.4 bits (93), Expect = 0.41
Identities = 15/24 (62%), Positives = 20/24 (82%)
Frame = +1
Query: 61 SIPCDLCKELVTVVGKVLKDNGTE 84
S+PCD+CK++VT G +LKDN TE
Sbjct: 4366 SLPCDICKDVVTAAGDMLKDNATE 4437
Score = 40.4 bits (93), Expect = 0.41
Identities = 16/23 (69%), Positives = 21/23 (90%)
Frame = +3
Query: 236 MSDMCKSYISEYSDLAIQMMMHM 258
+S CK+YIS+YS++AIQMMMHM
Sbjct: 10380 LSPQCKNYISQYSEIAIQMMMHM 10448
Score = 38.9 bits (89), Expect = 1.2
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = +2
Query: 275 SVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEI 334
S +++P + +P+ VVH Q K CE+C+ +V + LE N T++EI
Sbjct: 16598 SGRALPALSPLPSYVVH----------VTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEI 16747
Query: 335 VHEMEVVCYLLPASVKDQCK 354
+ +E C LP + Q +
Sbjct: 16748 LAALEKGCSFLPDPYQKQVR 16807
Score = 38.5 bits (88), Expect = 1.6
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 299 EKATVQEKTFSVCEICETMVKEVTGLLESNKTE 331
+K V K+ CE+CE +VKEVT L+++NKTE
Sbjct: 15929 QKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTE 16027
>gb|AF154046.1|AF154046 Naegleria fowleri naegleriapore A pore-forming peptide precursor
(proNP-A) mRNA, complete cds
Length = 989
Score = 95.1 bits (235), Expect = 1e-17
Identities = 75/296 (25%), Positives = 131/296 (43%), Gaps = 6/296 (2%)
Frame = +2
Query: 190 SKATEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGM-SDMCKSYISEYS 248
S A + C C V V + N +++ + A C +LG +C + + Y
Sbjct: 65 SAAPSEFCDVCKYAVQQVDQLALQNEAAIQNALLAA---CQQLGDNQFGKICNTVVLVYG 235
Query: 249 DLAIQMMMHMKDQQPKDICA-MVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKT 307
+ + ++ ++ P +C+ + CP +V + PA VV K E KAT +
Sbjct: 236 NELVNALVTYEN--PTRVCSEQLPLCPKNNTV---AVTPAPVVTVPKEEV--KATAGD-- 388
Query: 308 FSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDM 367
+ CEIC+ ++++V +ESN ++ EI E+ +C +P+ C + +I
Sbjct: 389 -AECEICKFVIQQVEAFIESNHSQAEIQKELNKLCSSVPSIFTQTCLSIARMV-PYIIKK 562
Query: 368 LLEATNPEAVCVMLKCCAANXXXXXXXXXXXA--GGF--CDICKMIVAYADKELEKNATT 423
L E +P VC L C ++ A G C C M + ++E+ +++
Sbjct: 563 LEEHNSPGQVCQGLHLCKSSAVKTMPTFQVDAELKGLIPCPACLMAMELVEQEISQSSVQ 742
Query: 424 TEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAA 479
+ +E L+ VC LP + S C V QY PV+VQ L + P +C + C A+
Sbjct: 743 SFVEDKLKNVCAKLPSTFSGYCASLVNQYFPVLVQKLLLAVSPEKICKLVDACPAS 910
Score = 52.0 bits (123), Expect = 1e-04
Identities = 55/235 (23%), Positives = 95/235 (40%), Gaps = 1/235 (0%)
Frame = +2
Query: 56 KPAVNSIPCDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYL 115
K C++CK ++ V ++ N ++ EI+ L K C +P C I +
Sbjct: 371 KATAGDAECEICKFVIQQVEAFIESNHSQAEIQKELNKLCSSVPSI-FTQTCLSIA-RMV 544
Query: 116 PVIMDMIKEEFDKPEVVCSALSLCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMAN 175
P I+ + EE + P VC L LC+S +A+K Q + +EL
Sbjct: 545 PYIIKKL-EEHNSPGQVCQGLHLCKS-----SAVKTMPTFQVD-------AELKG----- 670
Query: 176 VPLLLYPQDKPKQKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLVA-HAKEECDRLGP 234
L P C C+ + V++ + ++ V+S V K C +L
Sbjct: 671 ----LIP--------------CPACLMAMELVEQEISQSS--VQSFVEDKLKNVCAKLPS 790
Query: 235 GMSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQV 289
S C S +++Y + +Q + + P+ IC +V CP+ S ++ L V
Sbjct: 791 TFSGYCASLVNQYFPVLVQKL--LLAVSPEKICKLVDACPASSSKAVKALKATMV 949
>gb|U57999.1|MMU57999 Mus musculus prosaposin (psap\SGP-1) gene, complete cds
Length = 12506
Score = 82.0 bits (201), Expect = 1e-13
Identities = 38/61 (62%), Positives = 50/61 (81%)
Frame = +2
Query: 129 PEVVCSALSLCQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQ 188
P VCSAL+LCQSLQ++LA QKQL+SNKIPE+D + + +PFM+N+PLLLYPQD P+
Sbjct: 5048 PGEVCSALNLCQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRS 5224
Query: 189 K 189
+
Sbjct: 5225 Q 5227
Score = 80.9 bits (198), Expect = 3e-13
Identities = 39/83 (46%), Positives = 58/83 (68%), Gaps = 4/83 (4%)
Frame = +1
Query: 192 ATEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEY---- 247
A EDVCQDC++LV+DVQ AV+TN++F++ V H KE+CDRLGPG+SD+ Y++ +
Sbjct: 5476 ANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIVSLYLAPWFG*C 5655
Query: 248 SDLAIQMMMHMKDQQPKDICAMV 270
S+L Q ++ + Q P+ C V
Sbjct: 5656 SELG*QQVV-LPSQWPRGRCLRV 5721
Score = 67.0 bits (162), Expect = 4e-09
Identities = 27/41 (65%), Positives = 33/41 (79%)
Frame = +3
Query: 467 TFVCTKLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCN 507
+FV K+GVC +A K LLG + CVWGP YWC+NMETAA+CN
Sbjct: 11271 SFVIQKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCN 11393
Score = 62.4 bits (150), Expect = 1e-07
Identities = 27/42 (64%), Positives = 35/42 (83%)
Frame = +3
Query: 84 EDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEE 125
++EI YLEKTCE++ D L++ CKE+VDSYLPVI+DMIK E
Sbjct: 3852 QEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGE 3977
Score = 57.0 bits (136), Expect = 4e-06
Identities = 29/54 (53%), Positives = 36/54 (65%), Gaps = 1/54 (1%)
Frame = +1
Query: 18 SPVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKP-AVNSIPCDLCKEL 70
SPV K C+ G V C+ ++TA CGAVKHCQQ VWSKP AV++ LC+ L
Sbjct: 2149 SPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAVSARSQCLCRAL 2310
Score = 52.8 bits (125), Expect = 8e-05
Identities = 24/45 (53%), Positives = 29/45 (64%)
Frame = +3
Query: 400 GGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQ 444
GGFC++CK V Y + LEKN+T EI A LEK C FLP+ Q
Sbjct: 10683 GGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQ 10817
Score = 44.7 bits (104), Expect = 0.022
Identities = 18/27 (66%), Positives = 22/27 (80%)
Frame = +3
Query: 261 QQPKDICAMVGFCPSVKSVPLQTLVPA 287
QQPK+IC + GFC VK VP++TLVPA
Sbjct: 9609 QQPKEICVLAGFCNEVKRVPMKTLVPA 9689
Score = 43.1 bits (100), Expect = 0.064
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +1
Query: 435 HFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCT 471
H+ P S QC FV +YEP+++++L E+MDP FVC+
Sbjct: 11020 HWDPCPFSWQCDDFVAEYEPLLLEILVEVMDPGFVCS 11130
Score = 43.1 bits (100), Expect = 0.064
Identities = 16/56 (28%), Positives = 33/56 (58%)
Frame = +1
Query: 331 EEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAA 386
+E +V + C LLP + +C++ + +G +L+D+ + NP ++C ++ CAA
Sbjct: 10288 QELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAA 10455
Score = 39.7 bits (91), Expect = 0.71
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +3
Query: 57 PAVNSIPCDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPD 100
P N C++CK+ V + L+ N T++EI + LEK C FLPD
Sbjct: 10671 PQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPD 10802
Score = 37.7 bits (86), Expect = 2.7
Identities = 14/24 (58%), Positives = 19/24 (78%)
Frame = +3
Query: 61 SIPCDLCKELVTVVGKVLKDNGTE 84
S+PCD+CK +VT G +LKDN T+
Sbjct: 3012 SLPCDICKTVVTEAGNLLKDNATQ 3083
Score = 37.0 bits (84), Expect = 4.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 478 AAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHVWN 518
A P+ C G C++++TA C AV HC++ VW+
Sbjct: 2140 ALTSPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWS 2262
>dbj|D17028.1|HUMD3C07M5 Human HepG2 partial cDNA, clone hmd3c07m5
Length = 133
Score = 70.1 bits (170), Expect = 5e-10
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = +2
Query: 220 SLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMMHMKDQQPKDI 266
+LV H KEECDRL PGM+D+CK+YIS+YS++ IQMMMHM QPK I
Sbjct: 2 ALVEHVKEECDRLAPGMADICKTYISQYSEIPIQMMMHM---QPKXI 133
>gb|AC073370.6| Homo sapiens chromosome 10 clone RP11-472G21, complete sequence
Length = 178251
Score = 66.2 bits (160), Expect = 7e-09
Identities = 27/43 (62%), Positives = 33/43 (75%)
Frame = -1
Query: 19 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNS 61
PVL K+C +G VWCQ+++TAS CGAVKHC Q VW+KP V S
Sbjct: 3015 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVVS 2887
Score = 48.9 bits (115), Expect = 0.001
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = -1
Query: 462 EMMDPTFVCTKLG------VCGAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRH 515
E+ VC K+G A P+LG C G WC+N++TA+ C AV HC +
Sbjct: 3093 EISQVDLVCYKMGHLLTLVFILALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQT 2914
Query: 516 VWN 518
VWN
Sbjct: 2913 VWN 2905
Score = 40.4 bits (93), Expect = 0.41
Identities = 15/24 (62%), Positives = 20/24 (82%)
Frame = -1
Query: 61 SIPCDLCKELVTVVGKVLKDNGTE 84
S+PCD+CK++VT G +LKDN TE
Sbjct: 438 SLPCDICKDVVTAAGDMLKDNATE 367
>emb|X57108.1|HSCSAP11 Human gene for cerebroside sulfate activator protein, exons 10-14
Length = 1740
Score = 65.1 bits (157), Expect = 2e-08
Identities = 24/36 (66%), Positives = 29/36 (79%)
Frame = +1
Query: 472 KLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCN 507
K+G C +A KPLLG + C+WGP YWC+N ETAAQCN
Sbjct: 1624 KIGACPSAHKPLLGTEKCIWGPSYWCQNTETAAQCN 1731
Score = 57.8 bits (138), Expect = 3e-06
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +1
Query: 400 GGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQ 444
GGFC++CK +V Y D+ LEKN+T EI A LEK C FLP+ Q
Sbjct: 751 GGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQ 885
Score = 55.1 bits (131), Expect = 2e-05
Identities = 24/73 (32%), Positives = 40/73 (53%)
Frame = +3
Query: 425 EIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLL 484
EI +K+C LP+S+S++C + V+ Y ++ +L E + P VC+ L +C + P L
Sbjct: 453 EILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTRLPAL 632
Query: 485 GDDACVWGPGYWC 497
+ VW WC
Sbjct: 633 TGERWVWCGRGWC 671
Score = 52.0 bits (123), Expect = 1e-04
Identities = 19/55 (34%), Positives = 37/55 (66%)
Frame = +3
Query: 331 EEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCA 385
++EI+ + +C LP S+ ++C++ ++ YG +++ +LLE +PE VC ML C+
Sbjct: 447 QKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCS 611
Score = 45.4 bits (106), Expect = 0.013
Identities = 24/56 (42%), Positives = 35/56 (61%)
Frame = +3
Query: 84 EDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLC 139
+ EI +K C LP + L+ EC+E+VD+Y I+ ++ EE PE+VCS L LC
Sbjct: 447 QKEILDAFDKMCSKLP-KSLSEECQEVVDTYGSSILSILLEEV-SPELVCSMLHLC 608
Score = 44.7 bits (104), Expect = 0.022
Identities = 19/35 (54%), Positives = 27/35 (76%), Gaps = 2/35 (5%)
Frame = +2
Query: 445 CVQFVEQYEPVVVQLLAEMMDPTFVC--TKLGVCG 477
C QFV +YEPV++++L E+MDP+FVC + G CG
Sbjct: 1238 CDQFVAEYEPVLIEILVEVMDPSFVCLVSLTGWCG 1342
Score = 42.0 bits (97), Expect = 0.14
Identities = 18/37 (48%), Positives = 26/37 (69%)
Frame = +1
Query: 64 CDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPD 100
C++CK+LV + + L+ N T+ EI + LEK C FLPD
Sbjct: 760 CEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPD 870
Score = 38.9 bits (89), Expect = 1.2
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = +1
Query: 275 SVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEI 334
S +++P + +P+ VVH Q K CE+C+ +V + LE N T++EI
Sbjct: 682 SGRALPALSPLPSYVVH----------VTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEI 831
Query: 335 VHEMEVVCYLLPASVKDQCK 354
+ +E C LP + Q +
Sbjct: 832 LAALEKGCSFLPDPYQKQVR 891
Score = 38.5 bits (88), Expect = 1.6
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 299 EKATVQEKTFSVCEICETMVKEVTGLLESNKTE 331
+K V K+ CE+CE +VKEVT L+++NKTE
Sbjct: 13 QKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTE 111
>ref|NM_120258.1| Arabidopsis thaliana chromosome 5 CHR5v12152001 genomic sequence
Length = 1026
Score = 65.1 bits (157), Expect = 2e-08
Identities = 45/167 (26%), Positives = 75/167 (43%)
Frame = +2
Query: 310 VCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLL 369
VCE+C+ V V L+ + E+V + + C +P +K QC ++ Y Q L +
Sbjct: 272 VCELCDKYVTLVIDYLQDYDNQNELVEALHISCSQIP-PLKKQCLSMVDHYTQ-LFFTQV 445
Query: 370 EATNPEAVCVMLKCCAANXXXXXXXXXXXAGGFCDICKMIVAYADKELEKNATTTEIEAL 429
+ +C L C A G C+ C+ V+ +L+ T +I L
Sbjct: 446 STIKSDQICKRLNLCQA---VTPAFASQVHQGNCEACRETVSEVVTKLKDPETKLKIIRL 616
Query: 430 LEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVC 476
L K C L + D+C + V +Y P+++ L + ++ VCT L VC
Sbjct: 617 LLKECKSL-NNYQDKCKKMVFEYGPLMLTDLQKFLEKKDVCTILHVC 754
Score = 40.8 bits (94), Expect = 0.32
Identities = 25/82 (30%), Positives = 44/82 (53%)
Frame = +2
Query: 64 CDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIK 123
C+ C+E V+ V LKD T+ +I L K C+ L +CK++V Y P+++ ++
Sbjct: 536 CEACRETVSEVVTKLKDPETKLKIIRLLLKECKSL--NNYQDKCKKMVFEYGPLMLTDLQ 709
Query: 124 EEFDKPEVVCSALSLCQSLQKH 145
+ +K + VC+ L +C H
Sbjct: 710 KFLEKKD-VCTILHVCPGPATH 772
>gb|AY056420.1| Arabidopsis thaliana AT5g01800/T20L15_70 mRNA, complete cds
Length = 1027
Score = 65.1 bits (157), Expect = 2e-08
Identities = 45/167 (26%), Positives = 75/167 (43%)
Frame = +2
Query: 310 VCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLL 369
VCE+C+ V V L+ + E+V + + C +P +K QC ++ Y Q L +
Sbjct: 272 VCELCDKYVTLVIDYLQDYDNQNELVEALHISCSQIP-PLKKQCLSMVDHYTQ-LFFTQV 445
Query: 370 EATNPEAVCVMLKCCAANXXXXXXXXXXXAGGFCDICKMIVAYADKELEKNATTTEIEAL 429
+ +C L C A G C+ C+ V+ +L+ T +I L
Sbjct: 446 STIKSDQICKRLNLCQA---VTPAFASQVHQGNCEACRETVSEVVTKLKDPETKLKIIRL 616
Query: 430 LEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVC 476
L K C L + D+C + V +Y P+++ L + ++ VCT L VC
Sbjct: 617 LLKECKSL-NNYQDKCKKMVFEYGPLMLTDLQKFLEKKDVCTILHVC 754
Score = 40.8 bits (94), Expect = 0.32
Identities = 25/82 (30%), Positives = 44/82 (53%)
Frame = +2
Query: 64 CDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIK 123
C+ C+E V+ V LKD T+ +I L K C+ L +CK++V Y P+++ ++
Sbjct: 536 CEACRETVSEVVTKLKDPETKLKIIRLLLKECKSL--NNYQDKCKKMVFEYGPLMLTDLQ 709
Query: 124 EEFDKPEVVCSALSLCQSLQKH 145
+ +K + VC+ L +C H
Sbjct: 710 KFLEKKD-VCTILHVCPGPATH 772
>gb|AF220198.1|AF220198 Vitis riparia putative protein mRNA, complete cds
Length = 714
Score = 62.4 bits (150), Expect = 1e-07
Identities = 44/169 (26%), Positives = 72/169 (42%)
Frame = +2
Query: 309 SVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDML 368
+VC +CE ++ E LL N+T++ I+ + C + S K QC ++ Y ALI
Sbjct: 11 NVCIMCERLITEALDLLAENRTQKLIIEMLHATCSEV-QSFKQQCITLVDYYA-ALIFSE 184
Query: 369 LEATNPEAVCVMLKCCAANXXXXXXXXXXXAGGFCDICKMIVAYADKELEKNATTTEIEA 428
L P C C + C C+M+V +L T EI
Sbjct: 185 LALITPGNFCEKANLCGSTFTAGQLYQDS-----CVFCRMLVMKVLIKLRDPDTQLEILE 349
Query: 429 LLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCG 477
LL K C + + + +C + V +Y P+++ ++ VCT + CG
Sbjct: 350 LLLKGCDAV-KGLVRKCKRMVFEYGPIILNNTERFLEKNDVCTTVHACG 493
Score = 40.4 bits (93), Expect = 0.41
Identities = 25/76 (32%), Positives = 41/76 (53%)
Frame = +2
Query: 64 CDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIK 123
C C+ LV V L+D T+ EI L K C+ + +GL +CK +V Y P+I++ +
Sbjct: 272 CVFCRMLVMKVLIKLRDPDTQLEILELLLKGCDAV--KGLVRKCKRMVFEYGPIILNNTE 445
Query: 124 EEFDKPEVVCSALSLC 139
+K + VC+ + C
Sbjct: 446 RFLEKND-VCTTVHAC 490
>gb|M16764.1|HUMSPL Human pulmonary surfactant-associated proteolipid (SPL(Phe)) mRNA,
3' end
Length = 1408
Score = 62.0 bits (149), Expect = 1e-07
Identities = 57/284 (20%), Positives = 102/284 (35%), Gaps = 30/284 (10%)
Frame = +1
Query: 240 CKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVP-------------LQTLVP 286
C + +Y L I + D IC +G C S + P L+ +P
Sbjct: 49 CNQVLDDYFPLVIDYFQNQTDSN--GICMHLGLCKSRQPEPEQEPGMSDPLPKPLRDPLP 222
Query: 287 AQVVHEVKMETVEKAT----------VQEKTFSV----CEICETMVKEVTGLLESNKTEE 332
++ ++ + + A + E+ F + C +C ++K + ++
Sbjct: 223 DPLLDKLVLPVLPGALQARPGPHTQDLSEQQFPIPLPYCWLCRALIKRIQAMIPKGALRV 402
Query: 333 EIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXX 392
+ VC ++P C+ E Y L+D LL P+ VC ++ C+ +
Sbjct: 403 AVAQ----VCRVVPLVAGGICQCLAERYSVILLDTLLGRMLPQLVCRLVLRCSMDDSAGP 570
Query: 393 XXXXXX---AGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFV 449
C +C + A E+ ++A + ++C QFV
Sbjct: 571 RSPTGEWLPRDSECHLCMSVTTQAGNSSEQAILQAMLQACVGSWLD------REKCKQFV 732
Query: 450 EQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDACVWGP 493
EQ+ P ++ L+ D C LGVCG PL C+ P
Sbjct: 733 EQHTPQLLTLVPRGWDAHTTCQALGVCGTMSSPL----QCIHSP 852
>emb|X57107.1|HSCSAP3 Human gene for cerebroside sulfate activator protein, exons 3-4
Length = 816
Score = 59.3 bits (142), Expect = 9e-07
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +1
Query: 85 DEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEE 125
+EI YLEKTC++LP +++ CKEIVDSYLPVI+D+IK E
Sbjct: 682 EEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGE 804
Score = 40.4 bits (93), Expect = 0.41
Identities = 15/24 (62%), Positives = 20/24 (82%)
Frame = +1
Query: 61 SIPCDLCKELVTVVGKVLKDNGTE 84
S+PCD+CK++VT G +LKDN TE
Sbjct: 19 SLPCDICKDVVTAAGDMLKDNATE 90
>ref|NM_115032.1| Arabidopsis thaliana chromosome 3 CHR3v12152001 genomic sequence
Length = 1097
Score = 58.9 bits (141), Expect = 1e-06
Identities = 48/186 (25%), Positives = 75/186 (39%), Gaps = 3/186 (1%)
Frame = +3
Query: 301 ATVQEKTFS---VCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFI 357
+T+ EK + VC +CE V + LE N T+ EI+ ++ C L QC +
Sbjct: 282 STISEKVSNKEDVCTLCEEYVTDALSYLEKNVTQAEIIEDLHDRCSQL-RGYSQQCISLV 458
Query: 358 EVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXXAGGFCDICKMIVAYADKEL 417
+ Y L + LE+ P C + C C +C V+ +L
Sbjct: 459 DYY-VPLFFLQLESFQPHYFCKRMNLCGKVVALVEEARQDS----CGVCHRTVSEILIKL 623
Query: 418 EKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCG 477
+ T +I LL K C L ++ +C V +Y P+++ E + VCT L C
Sbjct: 624 QDPDTQLDIVELLIKGCKSL-KNYEKKCKTLVFEYGPLILVNAEEFLVKNDVCTLLRACP 800
Query: 478 AAKKPL 483
K L
Sbjct: 801 PEKSVL 818
Score = 50.8 bits (120), Expect = 3e-04
Identities = 46/197 (23%), Positives = 73/197 (36%)
Frame = +3
Query: 188 QKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEY 247
+K EDVC C VTD + N T + ++ + C +L G S C S + Y
Sbjct: 294 EKVSNKEDVCTLCEEYVTDALSYLEKNVTQAE-IIEDLHDRCSQL-RGYSQQCISLVDYY 467
Query: 248 SDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKT 307
L + ++ QP C + C V A V+E
Sbjct: 468 VPL---FFLQLESFQPHYFCKRMNLCGKV-----------------------VALVEEAR 569
Query: 308 FSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDM 367
C +C V E+ L+ T+ +IV + C L + + +CK + YG ++
Sbjct: 570 QDSCGVCHRTVSEILIKLQDPDTQLDIVELLIKGCKSL-KNYEKKCKTLVFEYGPLILVN 746
Query: 368 LLEATNPEAVCVMLKCC 384
E VC +L+ C
Sbjct: 747 AEEFLVKNDVCTLLRAC 797
>gb|AF076635.1|AF076635 Ovis aries clone SP-B 41 pulmonary surfactant-associated protein B
precursor (SP-B) mRNA, partial cds
Length = 1429
Score = 58.5 bits (140), Expect = 1e-06
Identities = 47/207 (22%), Positives = 79/207 (37%), Gaps = 14/207 (6%)
Frame = +3
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
C +C T++K + ++ + VC+++P V C+ +E Y L+D LL
Sbjct: 150 CWLCRTLIKRIQAVIPKGVLAMTVAQ----VCHVVPLLVGGICQCLVERYSVILLDTLLG 317
Query: 371 ATNPEAVC-VMLKCCAANXXXXXXXXXXXAGGF-------CDICKMIVAYADKELEKNAT 422
P+ VC ++L+C + + G C +C + A E+
Sbjct: 318 RMLPQLVCGLVLRCSSEDSAGPALPALGSLPGEWLPQDSECQLCMFVTTQAGNSSEQAMP 497
Query: 423 TTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKP 482
+A L +C QFVE++ P + L++ D C LG C P
Sbjct: 498 QAMRQACLGTWLD------RQKCEQFVEEHAPRLQTLVSSGWDAHMACQALGTCATPFSP 659
Query: 483 LLGDDACVWGPGY------WCKNMETA 503
L C+ P + +N ETA
Sbjct: 660 L----QCIHSPHF**ERTAMAENSETA 728
>gb|M19097.1|HUMSP18A Human pulmonary surfactant apoprotein 18 (SP 18) mRNA, 3' end
Length = 750
Score = 58.2 bits (139), Expect = 2e-06
Identities = 41/186 (22%), Positives = 70/186 (37%), Gaps = 3/186 (1%)
Frame = +1
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
C +C ++K + ++ + VC ++P C+ E Y L+D LL
Sbjct: 208 CWLCRALIKRIQAMIPKGALAVAVAQ----VCRVVPLVAGGICQCLAERYSVILLDTLLG 375
Query: 371 ATNPEAVCVMLKCCAANXXXXXXXXXXX---AGGFCDICKMIVAYADKELEKNATTTEIE 427
P+ VC ++ C+ + C +C + A E+ ++
Sbjct: 376 RMLPQLVCRLVLRCSMDDSAGPRSPTGEWLPRDSECHLCMSVTTQAGNSSEQAIPQAMLQ 555
Query: 428 ALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAAKKPLLGDD 487
A + ++C QFVEQ+ P ++ L+ D C LGVCG PL
Sbjct: 556 ACVGSWLD------REKCKQFVEQHTPQLLTLVPRGWDAHTTCQALGVCGTMSSPL---- 705
Query: 488 ACVWGP 493
C+ P
Sbjct: 706 QCIHSP 723
>gb|AF211857.1|AF211857 Ovis aries pulmonary surfactant protein B (SPBS) mRNA, partial cds
Length = 816
Score = 58.2 bits (139), Expect = 2e-06
Identities = 56/256 (21%), Positives = 91/256 (34%), Gaps = 23/256 (8%)
Frame = +1
Query: 263 PKDICAMVGFC------PSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFS------- 309
PK IC VG C P P L+ + + K Q + S
Sbjct: 4 PKFICQHVGLCKPRHPEPGKGPEPWGPLLDKMALPLLPGALQAKPGPQTQDLSQQRFPIP 183
Query: 310 --VCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDM 367
C +C T++K + ++ + VC+++P V C+ +E Y L+D
Sbjct: 184 LPFCWLCRTLIKRIQAVIPKGVLAMTVAQ----VCHVVPLLVGGICQCLVERYSVILLDT 351
Query: 368 LLEATNPEAVC-VMLKCCAANXXXXXXXXXXXAGGF-------CDICKMIVAYADKELEK 419
LL P+ VC ++L+C + + G C +C + A E+
Sbjct: 352 LLGRMLPQLVCGLVLRCSSEDSAGPALPALGSLPGEWLPQVSECQLCMFVTTQAGNSSEQ 531
Query: 420 NATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVCGAA 479
+A L +C QFVE++ P + L++ D C LG C
Sbjct: 532 AMPQAMRQACLGTWLD------RQKCEQFVEEHAPRLQTLVSSGWDAHMACQALGTCATP 693
Query: 480 KKPLLGDDACVWGPGY 495
PL C+ P +
Sbjct: 694 FSPL----QCIHSPHF 729
>gb|AF076282.1|AF076282 Mustela vison clone SP-B/Short similar to surfactant-associated
protein A mRNA sequence
Length = 1117
Score = 57.0 bits (136), Expect = 4e-06
Identities = 24/69 (34%), Positives = 46/69 (65%)
Frame = +2
Query: 72 TVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEV 131
T + K+ K+ +D +R +LE+ C+ LP + L +C+ ++D+Y PV++D + + + P+V
Sbjct: 5 TSLTKMTKEAIFQDTVRKFLEQECDVLPLKLLVPQCRHLLDTYFPVVIDYFQSQIN-PKV 181
Query: 132 VCSALSLCQ 140
+CS L LC+
Sbjct: 182 ICSHLGLCK 208
Score = 37.4 bits (85), Expect = 3.5
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 426 IEALLEKVCHFLP-ESVSDQCVQFVEQYEPVVVQLLAEMMDPTFVCTKLGVC 476
+ LE+ C LP + + QC ++ Y PVV+ ++P +C+ LG+C
Sbjct: 50 VRKFLEQECDVLPLKLLVPQCRHLLDTYFPVVIDYFQSQINPKVICSHLGLC 205
>gb|AF175768.1|AF175768 Dictyostelium discoideum SAPLIP C protein mRNA, complete cds
Length = 521
Score = 56.2 bits (134), Expect = 7e-06
Identities = 24/86 (27%), Positives = 46/86 (52%)
Frame = +1
Query: 403 CDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAE 462
C +C +IV A+ + +N +TEI ++L + C LP S D C+ V++Y P +++ +
Sbjct: 82 CMLCNVIVDEAEAYVAQNFNSTEISSILSENCQLLP-SFQDVCIGIVDEYTPTIIKYIIA 258
Query: 463 MMDPTFVCTKLGVCGAAKKPLLGDDA 488
PT +C ++ C ++ D+
Sbjct: 259 KESPTTICEQINCCDSSSSSSSSQDS 336
Score = 43.1 bits (100), Expect = 0.064
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +1
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
C +C +V E + N EI + C LLP S +D C ++ Y +I ++
Sbjct: 82 CMLCNVIVDEAEAYVAQNFNSTEISSILSENCQLLP-SFQDVCIGIVDEYTPTIIKYIIA 258
Query: 371 ATNPEAVCVMLKCC 384
+P +C + CC
Sbjct: 259 KESPTTICEQINCC 300
>emb|X69193.1|VCCYNA V.cardunculus mRNA for cynarase
Length = 1603
Score = 55.1 bits (131), Expect = 2e-05
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 12/110 (10%)
Frame = +3
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXXA--------- 399
+ QCK ++ YG+++I+MLL PE +C +K C+ +
Sbjct: 846 MSQQCKSLVDQYGKSMIEMLLSEEQPEKICSQMKLCSFDGSHDTSMIIESVVDKSKGKSS 1025
Query: 400 ---GGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
C +C+M V + ++ +N T I ++K+C LP + + V
Sbjct: 1026GLHDEMCTMCQMAVVWMQNQIRQNETEENIINYVDKLCERLPSPMGESAV 1175
Score = 47.8 bits (112), Expect = 0.003
Identities = 28/120 (23%), Positives = 55/120 (45%)
Frame = +3
Query: 236 MSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKM 295
MS CKS + +Y I+M++ ++QP+ IC+ + C S ++ + V
Sbjct: 846 MSQQCKSLVDQYGKSMIEMLL--SEEQPEKICSQMKLCSFDGSHDTSMIIESVV------ 1001
Query: 296 ETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKD 355
K +C +C+ V + + N+TEE I++ ++ +C LP+ + + D
Sbjct: 1002-DKSKGKSSGLHDEMCTMCQMAVVWMQNQIRQNETEENIINYVDKLCERLPSPMGESAVD 1178
Score = 42.4 bits (98), Expect = 0.11
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 1/137 (0%)
Frame = +3
Query: 103 LASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQKHLAAMKLQKQLQSNKIPE 162
++ +CK +VD Y +++M+ E ++PE +CS + LC
Sbjct: 846 MSQQCKSLVDQYGKSMIEMLLSE-EQPEKICSQMKLC----------------------S 956
Query: 163 LDFSELTSPFMANVPLLLYPQDKPKQKSKATED-VCQDCIRLVTDVQEAVRTNATFVKSL 221
D S TS + +V DK K KS D +C C V +Q +R N T +++
Sbjct: 957 FDGSHDTSMIIESV------VDKSKGKSSGLHDEMCTMCQMAVVWMQNQIRQNET-EENI 1115
Query: 222 VAHAKEECDRLGPGMSD 238
+ + + C+RL M +
Sbjct: 1116INYVDKLCERLPSPMGE 1166
>ref|NM_069043.1| Caenorhabditis elegans
Length = 717
Score = 52.8 bits (125), Expect = 8e-05
Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 13/184 (7%)
Frame = +1
Query: 309 SVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDML 368
S CE CE ++K ++ + K EE+ + ++C S D+C+ F+ + + +
Sbjct: 106 SSCEECENVIKRISEAAKDPKKIEELKIVLGMMCR--ETSYADECRLFVSQLDKFIDKLQ 279
Query: 369 LEATNPEAVCVMLKCCA-----------ANXXXXXXXXXXXAGGFCDICKMIVAYADKEL 417
NP AVC L C+ CD C+ +V +
Sbjct: 280 PFLKNPHAVCTRLHICSNKKIDSFRRILLEFAKRAQKTFDAPAIVCDECQFVVKELKTVV 459
Query: 418 EKNATTTEI-EALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLL-AEMMDPTFVCTKLGV 475
E + E + L E VC L + C V++Y P +Q L A + DP VC +
Sbjct: 460 EDKKSQAEARDFLRENVCKSLGQ-YRGFCDLVVDEYLPQFIQELDAILQDPHQVCVDIKA 636
Query: 476 CGAA 479
C +A
Sbjct: 637 CNSA 648
Score = 41.2 bits (95), Expect = 0.24
Identities = 43/196 (21%), Positives = 84/196 (41%), Gaps = 8/196 (4%)
Frame = +1
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMM 256
C++C ++ + EA + + ++ L C +D C+ ++S+ ++
Sbjct: 112 CEECENVIKRISEAAK-DPKKIEELKIVLGMMCRETS--YADECRLFVSQLDKFIDKLQP 282
Query: 257 HMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFS----VCE 312
+K+ P +C + C + K + + +E A +KTF VC+
Sbjct: 283 FLKN--PHAVCTRLHICSNKK------------IDSFRRILLEFAKRAQKTFDAPAIVCD 420
Query: 313 ICETMVKEVTGLLESNKTEEEIVHEM-EVVCYLLPASVKDQCKDFIEVYGQALI---DML 368
C+ +VKE+ ++E K++ E + E VC L + C ++ Y I D +
Sbjct: 421 ECQFVVKELKTVVEDKKSQAEARDFLRENVCKSL-GQYRGFCDLVVDEYLPQFIQELDAI 597
Query: 369 LEATNPEAVCVMLKCC 384
L+ +P VCV +K C
Sbjct: 598 LQ--DPHQVCVDIKAC 639
Score = 40.0 bits (92), Expect = 0.54
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +1
Query: 51 QNVWSKPAVNSIPCDLCKELVTVVGKVLKDNGTEDEIRSYL-EKTCEFLPDQGLASECKE 109
Q + PA I CD C+ +V + V++D ++ E R +L E C+ L C
Sbjct: 385 QKTFDAPA---IVCDECQFVVKELKTVVEDKKSQAEARDFLRENVCKSLGQY--RGFCDL 549
Query: 110 IVDSYLPVIMDMIKEEFDKPEVVCSALSLCQS 141
+VD YLP + + P VC + C S
Sbjct: 550 VVDEYLPQFIQELDAILQDPHQVCVDIKACNS 645
Score = 37.4 bits (85), Expect = 3.5
Identities = 19/78 (24%), Positives = 38/78 (48%)
Frame = +1
Query: 403 CDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAE 462
C+ C+ ++ + + E++ +L +C S +D+C FV Q + + +L
Sbjct: 112 CEECENVIKRISEAAKDPKKIEELKIVLGMMCR--ETSYADECRLFVSQLDKFIDKLQPF 285
Query: 463 MMDPTFVCTKLGVCGAAK 480
+ +P VCT+L +C K
Sbjct: 286 LKNPHAVCTRLHICSNKK 339
>dbj|AB069959.1|AB069959 Glycine max sapd mRNA for aspartic proteinase delta, complete cds
Length = 1719
Score = 52.4 bits (124), Expect = 1e-04
Identities = 25/111 (22%), Positives = 47/111 (41%), Gaps = 13/111 (11%)
Frame = +1
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXXA--------- 399
+ +CK + YGQ ++D+LL T P+ +C + CA +
Sbjct: 961 MSQECKTIVAEYGQTILDLLLAETQPKKICSRIGLCAFDGTHGVDVGIKSVVDENERKSL 1140
Query: 400 ----GGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
G C C+M V + +L +N T +I + + ++C +P + + V
Sbjct: 1141 GGHHGAACPACEMAVVWMQNQLSRNQTQDQILSYINQLCDKMPSPMGESAV 1293
Score = 45.8 bits (107), Expect = 0.010
Identities = 33/161 (20%), Positives = 72/161 (44%), Gaps = 2/161 (1%)
Frame = +1
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPG--MSDMCKSYISEYSDLAIQM 254
C + + D ++ T V +++ HA +G MS CK+ ++EY + +
Sbjct: 856 CANGCSAIADSGTSLLAGPTTVITMINHA------IGASGVMSQECKTIVAEYGQTILDL 1017
Query: 255 MMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSVCEIC 314
++ + QPK IC+ +G C + + + + V + E+ ++ + C C
Sbjct: 1018 LL--AETQPKKICSRIGLCAFDGTHGVDVGIKSVV------DENERKSLGGHHGAACPAC 1173
Query: 315 ETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKD 355
E V + L N+T+++I+ + +C +P+ + + D
Sbjct: 1174 EMAVVWMQNQLSRNQTQDQILSYINQLCDKMPSPMGESAVD 1296
>emb|Y09123.1|CCY09123 C.calcitrapa mRNA for aspartic proteinase
Length = 1721
Score = 52.4 bits (124), Expect = 1e-04
Identities = 26/111 (23%), Positives = 48/111 (42%), Gaps = 13/111 (11%)
Frame = +2
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXX---------XXXXA 399
+ QCK ++ YG+ +I+MLL P+ +C +K C + +
Sbjct: 980 MSQQCKTLVDQYGKTIIEMLLSEAQPDKICSQMKLCTFDGARDVSSIIESVVDKNNGKSS 1159
Query: 400 GG----FCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
GG C C+M V + ++++N T I + ++C LP + + V
Sbjct: 1160 GGVHDEMCTFCEMAVVWMQNQIKRNQTEDNIINYVNELCDRLPSPMGESAV 1312
>ref|NM_076834.1| Caenorhabditis elegans
Length = 618
Score = 52.0 bits (123), Expect = 1e-04
Identities = 43/187 (22%), Positives = 84/187 (43%), Gaps = 14/187 (7%)
Frame = +1
Query: 304 QEKTFSVCEICETMVKEVTGLLESNKT--EEEIVHEMEVVCYLLPASVKDQCKDFIEVYG 361
+E++ C++CE VK G + + T +++ E + + + +P + ++ C+ ++
Sbjct: 61 KERSSLGCQMCELAVKTYDGSADKDVTSIKKDFDTECKKLFHAIPFAPQE-CEHYVNEKL 237
Query: 362 QALIDMLLEATNPEAVCVMLKCC----------AANXXXXXXXXXXXAGGFCDICKMIVA 411
+I L T P+ VC L C AA G C++CKM V
Sbjct: 238 DPIIKELESGTAPKDVCKKLGECPKTMKTYILLAAVTLAVFFSSTEANGIECEMCKMSVK 417
Query: 412 YADKELEKNATTTE--IEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMDPTFV 469
L ++ + + ++A +K H +P + +C +F++ ++ L P+ V
Sbjct: 418 IVVPMLGEDTESIKKAVDAECKKEFHSIPFG-TQECKKFIDTKLDPIIHELENGTAPSDV 594
Query: 470 CTKLGVC 476
CTKLG+C
Sbjct: 595 CTKLGMC 615
Score = 49.7 bits (117), Expect = 7e-04
Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 5/204 (2%)
Frame = +1
Query: 186 PKQKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLG---PGMSDMCKS 242
PK++S CQ C V + + T +K EC +L P C+
Sbjct: 58 PKERSSLG---CQMCELAVKTYDGSADKDVTSIKK---DFDTECKKLFHAIPFAPQECEH 219
Query: 243 YISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKAT 302
Y++E D I+ + PKD+C +G CP ++ A V V + E
Sbjct: 220 YVNEKLDPIIKELE--SGTAPKDVCKKLGECPKTMKT---YILLAAVTLAVFFSSTEANG 384
Query: 303 VQEKTFSVCEICETMVKEVTGLL--ESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVY 360
++ CE+C+ VK V +L ++ ++ + E + + +P + +CK FI+
Sbjct: 385 IE------CEMCKMSVKIVVPMLGEDTESIKKAVDAECKKEFHSIPFGTQ-ECKKFIDTK 543
Query: 361 GQALIDMLLEATNPEAVCVMLKCC 384
+I L T P VC L C
Sbjct: 544 LDPIIHELENGTAPSDVCTKLGMC 615
>dbj|AB002695.1|AB002695 Pumpkin mRNA for aspartic endopeptidase, complete cds
Length = 1776
Score = 51.6 bits (122), Expect = 2e-04
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Frame = +1
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXX-------------XXXXXX 395
V QCK + YGQ ++D+LL +P+ +C + C +
Sbjct: 1036 VSQQCKAVVAQYGQTIMDLLLSEADPKKICSQINLCTFDGTRGVSMGIESVVDENAGKSS 1215
Query: 396 XXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
G C +C+M V + +L +N T I + ++C +P + V
Sbjct: 1216 DSLHDGMCSVCEMTVVWMQNQLRQNQTKERIINYINELCDRMPSPMGQSAV 1368
>ref|NM_104909.1| Arabidopsis thaliana chromosome 1 CHR1v12152001 genomic sequence
Length = 1581
Score = 51.2 bits (121), Expect = 2e-04
Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Frame = +1
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXX-------------XXXXXX 395
V QCK ++ YGQ ++D+LL T P+ +C + CA +
Sbjct: 997 VSQQCKTVVDQYGQTILDLLLAETQPKKICSQIGLCAYDGTHGVSMGIESVVDKENTRSS 1176
Query: 396 XXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
C C+M V + +L +N T I + ++C +P + V
Sbjct: 1177 SGLRDAGCPACEMAVVWIQSQLRQNMTQERIVNYINEICERMPSPNGESAV 1329
Score = 44.7 bits (104), Expect = 0.022
Identities = 30/119 (25%), Positives = 50/119 (41%), Gaps = 7/119 (5%)
Frame = +1
Query: 236 MSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKM 295
+S CK+ + +Y + +++ + QPK IC+ +G C H V M
Sbjct: 997 VSQQCKTVVDQYGQTILDLLL--AETQPKKICSQIGLC------------AYDGTHGVSM 1134
Query: 296 ETVEKATVQEKTFSV-------CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPA 347
+E +E T S C CE V + L N T+E IV+ + +C +P+
Sbjct: 1135 -GIESVVDKENTRSSSGLRDAGCPACEMAVVWIQSQLRQNMTQERIVNYINEICERMPS 1308
Score = 38.1 bits (87), Expect = 2.1
Identities = 35/179 (19%), Positives = 73/179 (40%), Gaps = 2/179 (1%)
Frame = +1
Query: 103 LASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQKHLAAMKLQKQLQSNKIPE 162
++ +CK +VD Y I+D++ E +P+ +CS + LC H +M ++
Sbjct: 997 VSQQCKTVVDQYGQTILDLLLAE-TQPKKICSQIGLCAYDGTHGVSMGIES--------- 1146
Query: 163 LDFSELTSPFMANVPLLLYPQDKPKQKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLV 222
+ ++ + S + C C V +Q +R N T + +V
Sbjct: 1147 -----------------VVDKENTRSSSGLRDAGCPACEMAVVWIQSQLRQNMT-QERIV 1272
Query: 223 AHAKEECDRLGP--GMSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSV 279
+ E C+R+ G S + S +S+ ++ + + D P++ +G P + +
Sbjct: 1273 NYINEICERMPSPNGESAVDCSQLSKMPTVSFTIGGKVFDLAPEEYVLKIGEGPVAQCI 1449
>ref|NM_101062.1| Arabidopsis thaliana chromosome 1 CHR1v12152001 genomic sequence
Length = 1814
Score = 51.2 bits (121), Expect = 2e-04
Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Frame = +2
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXX-------------XXXXXX 395
V QCK ++ YGQ ++D+LL T P+ +C + C +
Sbjct: 986 VSQQCKTVVDQYGQTILDLLLSETQPKKICSQIGLCTFDGTRGVSMGIESVVDKENAKLS 1165
Query: 396 XXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
C C+M V + +L +N T I + ++C LP + + V
Sbjct: 1166 NGVGDAACSACEMAVVWIQSQLRQNMTQERILNYVNELCERLPSPMGESAV 1318
Score = 45.1 bits (105), Expect = 0.017
Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 5/164 (3%)
Frame = +2
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPG--MSDMCKSYISEYSDLAIQM 254
C+ + D ++ T + +++ HA +G +S CK+ + +Y + +
Sbjct: 881 CESGCSAIADSGTSLLAGPTTIITMINHA------IGAAGVVSQQCKTVVDQYGQTILDL 1042
Query: 255 MMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKT---FSVC 311
++ + QPK IC+ +G C T + V V+K + + C
Sbjct: 1043 LL--SETQPKKICSQIGLC---------TFDGTRGVSMGIESVVDKENAKLSNGVGDAAC 1189
Query: 312 EICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKD 355
CE V + L N T+E I++ + +C LP+ + + D
Sbjct: 1190 SACEMAVVWIQSQLRQNMTQERILNYVNELCERLPSPMGESAVD 1321
>gb|AY056387.1| Arabidopsis thaliana At1g11910/F12F1_24 mRNA, complete cds
Length = 1874
Score = 51.2 bits (121), Expect = 2e-04
Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Frame = +2
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXX-------------XXXXXX 395
V QCK ++ YGQ ++D+LL T P+ +C + C +
Sbjct: 986 VSQQCKTVVDQYGQTILDLLLSETQPKKICSQIGLCTFDGTRGVSMGIESVVDKENAKLS 1165
Query: 396 XXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
C C+M V + +L +N T I + ++C LP + + V
Sbjct: 1166 NGVGDAACSACEMAVVWIQSQLRQNMTQERILNYVNELCERLPSPMGESAV 1318
Score = 45.1 bits (105), Expect = 0.017
Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 5/164 (3%)
Frame = +2
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPG--MSDMCKSYISEYSDLAIQM 254
C+ + D ++ T + +++ HA +G +S CK+ + +Y + +
Sbjct: 881 CESGCSAIADSGTSLLAGPTTIITMINHA------IGAAGVVSQQCKTVVDQYGQTILDL 1042
Query: 255 MMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKT---FSVC 311
++ + QPK IC+ +G C T + V V+K + + C
Sbjct: 1043 LL--SETQPKKICSQIGLC---------TFDGTRGVSMGIESVVDKENAKLSNGVGDAAC 1189
Query: 312 EICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKD 355
CE V + L N T+E I++ + +C LP+ + + D
Sbjct: 1190 SACEMAVVWIQSQLRQNMTQERILNYVNELCERLPSPMGESAVD 1321
>gb|AY070453.1| Arabidopsis thaliana putative aspartic protease (At1g62290) mRNA,
complete cds
Length = 1778
Score = 51.2 bits (121), Expect = 2e-04
Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Frame = +2
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXX-------------XXXXXX 395
V QCK ++ YGQ ++D+LL T P+ +C + CA +
Sbjct: 983 VSQQCKTVVDQYGQTILDLLLAETQPKKICSQIGLCAYDGTHGVSMGIESVVDKENTRSS 1162
Query: 396 XXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
C C+M V + +L +N T I + ++C +P + V
Sbjct: 1163 SGLRDAGCPACEMAVVWIQSQLRQNMTQERIVNYINEICERMPSPNGESAV 1315
Score = 44.7 bits (104), Expect = 0.022
Identities = 30/119 (25%), Positives = 50/119 (41%), Gaps = 7/119 (5%)
Frame = +2
Query: 236 MSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKM 295
+S CK+ + +Y + +++ + QPK IC+ +G C H V M
Sbjct: 983 VSQQCKTVVDQYGQTILDLLL--AETQPKKICSQIGLC------------AYDGTHGVSM 1120
Query: 296 ETVEKATVQEKTFSV-------CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPA 347
+E +E T S C CE V + L N T+E IV+ + +C +P+
Sbjct: 1121 -GIESVVDKENTRSSSGLRDAGCPACEMAVVWIQSQLRQNMTQERIVNYINEICERMPS 1294
Score = 38.1 bits (87), Expect = 2.1
Identities = 35/179 (19%), Positives = 73/179 (40%), Gaps = 2/179 (1%)
Frame = +2
Query: 103 LASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQKHLAAMKLQKQLQSNKIPE 162
++ +CK +VD Y I+D++ E +P+ +CS + LC H +M ++
Sbjct: 983 VSQQCKTVVDQYGQTILDLLLAE-TQPKKICSQIGLCAYDGTHGVSMGIES--------- 1132
Query: 163 LDFSELTSPFMANVPLLLYPQDKPKQKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLV 222
+ ++ + S + C C V +Q +R N T + +V
Sbjct: 1133 -----------------VVDKENTRSSSGLRDAGCPACEMAVVWIQSQLRQNMT-QERIV 1258
Query: 223 AHAKEECDRLGP--GMSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSV 279
+ E C+R+ G S + S +S+ ++ + + D P++ +G P + +
Sbjct: 1259 NYINEICERMPSPNGESAVDCSQLSKMPTVSFTIGGKVFDLAPEEYVLKIGEGPVAQCI 1435
>gb|AY056403.1| Arabidopsis thaliana At1g11910/F12F1_24 mRNA, complete cds
Length = 1820
Score = 51.2 bits (121), Expect = 2e-04
Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Frame = +2
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXX-------------XXXXXX 395
V QCK ++ YGQ ++D+LL T P+ +C + C +
Sbjct: 986 VSQQCKTVVDQYGQTILDLLLSETQPKKICSQIGLCTFDGTRGVSMGIESVVDKENAKLS 1165
Query: 396 XXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
C C+M V + +L +N T I + ++C LP + + V
Sbjct: 1166 NGVGDAACSACEMAVVWIQSQLRQNMTQERILNYVNELCERLPSPMGESAV 1318
Score = 45.1 bits (105), Expect = 0.017
Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 5/164 (3%)
Frame = +2
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPG--MSDMCKSYISEYSDLAIQM 254
C+ + D ++ T + +++ HA +G +S CK+ + +Y + +
Sbjct: 881 CESGCSAIADSGTSLLAGPTTIITMINHA------IGAAGVVSQQCKTVVDQYGQTILDL 1042
Query: 255 MMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKT---FSVC 311
++ + QPK IC+ +G C T + V V+K + + C
Sbjct: 1043 LL--SETQPKKICSQIGLC---------TFDGTRGVSMGIESVVDKENAKLSNGVGDAAC 1189
Query: 312 EICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKD 355
CE V + L N T+E I++ + +C LP+ + + D
Sbjct: 1190 SACEMAVVWIQSQLRQNMTQERILNYVNELCERLPSPMGESAVD 1321
>ref|NM_069046.1| Caenorhabditis elegans
Length = 1209
Score = 51.2 bits (121), Expect = 2e-04
Identities = 79/393 (20%), Positives = 140/393 (35%), Gaps = 10/393 (2%)
Frame = +1
Query: 63 PCDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMI 122
PC+ CK +V KD +++ L C Q S+C + +D L I +
Sbjct: 67 PCESCKSMVQNFIDASKDRMKMAQLKVSLSMLCVGTSHQ---SDCSKTLDK-LDFIAYKL 234
Query: 123 KEEFDKPEVVCSALSLCQSLQ----KHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPL 178
VCS L +C Q LA + L+K + +AN +
Sbjct: 235 APYLADTSAVCSKLQMCGESQFSPLARLAMLYLKK---------------SEAIVANDNI 369
Query: 179 LLYPQDKPKQKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSD 238
+ ++VC +C + + V T + C G
Sbjct: 370 M-------------RQEVCDECQASTAQIGKLVGDEFTTYAVKSTLQRFVCKSAGKAHK- 507
Query: 239 MCKSYISEYSDLAIQMMMHMKDQ--QPKDICAMVGFCPSVKSVPLQTLVPAQVVHEV-KM 295
C ++S + +M MKD + + +C+ +G C S S P P Q E+ K
Sbjct: 508 ACNIFVSS---VIPDLMTEMKDMFTEKELMCSNMGLC-SATSKPAAREAPKQPASEMWKS 675
Query: 296 ETVEKATVQEKTFSVCEICETMVKEVTGLLESNK-TEEEIVHEMEVVCYLLPASVKDQCK 354
+ K + E+ S E + + ++ + T ++I V C + A+ D C
Sbjct: 676 MGMVKTSNGEELMSCFECTLSADALLQEFIDKRQGTADDI---QTVACNKMVANWTDGCN 846
Query: 355 DFIEVYGQALIDMLLEATNPEAVCVMLKCC--AANXXXXXXXXXXXAGGFCDICKMIVAY 412
DF+ +Y ++ + + +C M+ C N G C+ CK + +
Sbjct: 847 DFVHMYMSTVLFLTYNQFDGRGICTMMHSCEKKENALVEMAMSEKVMLG-CENCKAVEHF 1023
Query: 413 ADKELEKNATTTEIEALLEKVCHFLPESVSDQC 445
+ E + ++ L VC LP ++ C
Sbjct: 1024FAQNQEA-LHSHAVDGLYSNVCQKLPTALGTMC 1119
Score = 47.0 bits (110), Expect = 0.004
Identities = 65/305 (21%), Positives = 114/305 (37%), Gaps = 14/305 (4%)
Frame = +1
Query: 64 CDLCKELVTVVGKVLKDNGTEDEIRSYLEK-TCEFLPDQGLASE-CKEIVDSYLPVIMDM 121
CD C+ +GK++ D T ++S L++ C+ G A + C V S +P +M
Sbjct: 385 CDECQASTAQIGKLVGDEFTTYAVKSTLQRFVCK---SAGKAHKACNIFVSSVIPDLMTE 555
Query: 122 IKEEFDKPEVVCSALSLCQSLQKHLAAMKLQKQLQS------NKIPELDFSELTSPFMAN 175
+K+ F + E++CS + LC + K AA + KQ S + + EL S F
Sbjct: 556 MKDMFTEKELMCSNMGLCSATSKP-AAREAPKQPASEMWKSMGMVKTSNGEELMSCFECT 732
Query: 176 VPLLLYPQDKPKQKSKATEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPG 235
+ + + + Q+ I + ++T A C+++
Sbjct: 733 L---------------SADALLQEFIDKRQGTADDIQTVA-------------CNKMVAN 828
Query: 236 MSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKM 295
+D C ++ Y + + + D + IC M+ C E K
Sbjct: 829 WTDGCNDFVHMYMSTVLFLTYNQFD--GRGICTMMHSC------------------EKKE 948
Query: 296 ETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEV------VCYLLPASV 349
+ + + EK CE C K V N +E +H V VC LP ++
Sbjct: 949 NALVEMAMSEKVMLGCENC----KAVEHFFAQN---QEALHSHAVDGLYSNVCQKLPTAL 1107
Query: 350 KDQCK 354
C+
Sbjct: 1108GTMCE 1122
>gb|U51036.1|ATU51036 Arabidopsis thaliana aspartic proteinase mRNA, partial cds
Length = 1722
Score = 51.2 bits (121), Expect = 2e-04
Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Frame = +2
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXX-------------XXXXXX 395
V QCK ++ YGQ ++D+LL T P+ +C + C +
Sbjct: 878 VSQQCKTVVDQYGQTILDLLLSETQPKKICSQIGLCTFDGTRGVSMGIESVVDKENAKLS 1057
Query: 396 XXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
C C+M V + +L +N T I + ++C LP + + V
Sbjct: 1058NGVGDAACSACEMAVVWIQSQLRQNMTQERILNYVNELCERLPSPMGESAV 1210
Score = 45.1 bits (105), Expect = 0.017
Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 5/164 (3%)
Frame = +2
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPG--MSDMCKSYISEYSDLAIQM 254
C+ + D ++ T + +++ HA +G +S CK+ + +Y + +
Sbjct: 773 CESGCSAIADSGTSLLAGPTTIITMINHA------IGAAGVVSQQCKTVVDQYGQTILDL 934
Query: 255 MMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKT---FSVC 311
++ + QPK IC+ +G C T + V V+K + + C
Sbjct: 935 LL--SETQPKKICSQIGLC---------TFDGTRGVSMGIESVVDKENAKLSNGVGDAAC 1081
Query: 312 EICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKD 355
CE V + L N T+E I++ + +C LP+ + + D
Sbjct: 1082SACEMAVVWIQSQLRQNMTQERILNYVNELCERLPSPMGESAVD 1213
>dbj|AB025359.2|AB025359 Helianthus annuus mRNA for aspartic proteinase, complete cds
Length = 1722
Score = 51.2 bits (121), Expect = 2e-04
Identities = 26/111 (23%), Positives = 47/111 (41%), Gaps = 13/111 (11%)
Frame = +2
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXX----------XXXX 398
+ QCK ++ YG+ +I+MLL P+ +C + C +
Sbjct: 962 MSQQCKTLVDQYGKTIIEMLLSEAQPDKICSRMNLCTFDGSRDVSSIIESVVDKNNGKSS 1141
Query: 399 AG---GFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
AG G C C+M V + +L++N T I + ++C +P + + V
Sbjct: 1142 AGLNDGICAFCEMAVVWMQSQLKRNQTEDSIINYVNELCDRIPSPMGESAV 1294
>gb|AY063974.1| Arabidopsis thaliana putative aspartic proteinase (At1g11910) mRNA,
complete cds
Length = 1830
Score = 51.2 bits (121), Expect = 2e-04
Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Frame = +2
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXX-------------XXXXXX 395
V QCK ++ YGQ ++D+LL T P+ +C + C +
Sbjct: 986 VSQQCKTVVDQYGQTILDLLLSETQPKKICSQIGLCTFDGTRGVSMGIESVVDKENAKLS 1165
Query: 396 XXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
C C+M V + +L +N T I + ++C LP + + V
Sbjct: 1166 NGVGDAACSACEMAVVWIQSQLRQNMTQERILNYVNELCERLPSPMGESAV 1318
Score = 45.1 bits (105), Expect = 0.017
Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 5/164 (3%)
Frame = +2
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPG--MSDMCKSYISEYSDLAIQM 254
C+ + D ++ T + +++ HA +G +S CK+ + +Y + +
Sbjct: 881 CESGCSAIADSGTSLLAGPTTIITMINHA------IGAAGVVSQQCKTVVDQYGQTILDL 1042
Query: 255 MMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKT---FSVC 311
++ + QPK IC+ +G C T + V V+K + + C
Sbjct: 1043 LL--SETQPKKICSQIGLC---------TFDGTRGVSMGIESVVDKENAKLSNGVGDAAC 1189
Query: 312 EICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKD 355
CE V + L N T+E I++ + +C LP+ + + D
Sbjct: 1190 SACEMAVVWIQSQLRQNMTQERILNYVNELCERLPSPMGESAVD 1321
>dbj|AB016728.1|AB016728 Dictyostelium discoideum sapA mRNA for saposin A, complete cds
Length = 650
Score = 50.4 bits (119), Expect = 4e-04
Identities = 28/105 (26%), Positives = 55/105 (51%)
Frame = +2
Query: 283 TLVPAQVVHEVKMETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVC 342
T++ A + K V+K V E + C+ICE +VK++ L +N++ E I H + ++C
Sbjct: 197 TIILASLFATSKSLVVQK-NVGEIDNNQCQICELLVKDIIEGLTANQSVEVIEHGLNLIC 373
Query: 343 YLLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAAN 387
+P V+ CK F++ Q ++ + +P+ +C C ++
Sbjct: 374 DHIPLHVR-VCKQFVDSNFQKIVQFIENHDDPQEICEKCGVCGSS 505
Score = 47.4 bits (111), Expect = 0.003
Identities = 26/77 (33%), Positives = 39/77 (49%)
Frame = +2
Query: 403 CDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAE 462
C IC+++V + L N + IE L +C +P V C QFV+ +VQ +
Sbjct: 278 CQICELLVKDIIEGLTANQSVEVIEHGLNLICDHIPLHVR-VCKQFVDSNFQKIVQFIEN 454
Query: 463 MMDPTFVCTKLGVCGAA 479
DP +C K GVCG++
Sbjct: 455 HDDPQEICEKCGVCGSS 505
Score = 37.4 bits (85), Expect = 3.5
Identities = 23/87 (26%), Positives = 41/87 (46%)
Frame = +2
Query: 59 VNSIPCDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVI 118
+++ C +C+ LV + + L N + + I L C+ +P CK+ VDS I
Sbjct: 263 IDNNQCQICELLVKDIIEGLTANQSVEVIEHGLNLICDHIPLH--VRVCKQFVDSNFQKI 436
Query: 119 MDMIKEEFDKPEVVCSALSLCQSLQKH 145
+ I E D P+ +C +C S ++
Sbjct: 437 VQFI-ENHDDPQEICEKCGVCGSSDEY 514
>emb|X81984.1|CCCYPRSN C.cardunculus mRNA for cyprosin
Length = 1757
Score = 50.4 bits (119), Expect = 4e-04
Identities = 34/159 (21%), Positives = 60/159 (37%), Gaps = 15/159 (9%)
Frame = +3
Query: 303 VQEKTFSVC-EICETMVKEVTGLLES-NKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVY 360
+++KT C + C + T LL EI H + + QCK + Y
Sbjct: 867 IEDKTTGFCSDGCAAIADSGTSLLAGPTAIITEINHAIGA-----KGVMSQQCKTLVSQY 1031
Query: 361 GQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXXA-------------GGFCDICK 407
G+ +I+MLL P+ +C +K C + C C+
Sbjct: 1032 GKTMIEMLLSEAQPDKICSQMKLCTFDGARDASSIIESVVDENNGKSSSGVHDEMCTFCE 1211
Query: 408 MIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
M V + ++++N T I + ++C LP + + V
Sbjct: 1212 MAVVWMQNQIKRNETEDNIINYVNELCDRLPSPMGESAV 1328
Score = 46.2 bits (108), Expect = 0.008
Identities = 37/165 (22%), Positives = 76/165 (45%), Gaps = 2/165 (1%)
Frame = +3
Query: 193 TEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPG--MSDMCKSYISEYSDL 250
T C D + D ++ T + + + HA +G MS CK+ +S+Y
Sbjct: 879 TTGFCSDGCAAIADSGTSLLAGPTAIITEINHA------IGAKGVMSQQCKTLVSQYGKT 1040
Query: 251 AIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKTFSV 310
I+M+ + + QP IC+ + C + +++ + VV E ++ + V ++ +
Sbjct: 1041 MIEML--LSEAQPDKICSQMKLCTFDGARDASSIIES-VVDENNGKS--SSGVHDE---M 1196
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKD 355
C CE V + ++ N+TE+ I++ + +C LP+ + + D
Sbjct: 1197 CTFCEMAVVWMQNQIKRNETEDNIINYVNELCDRLPSPMGESAVD 1331
>ref|NM_069045.1| Caenorhabditis elegans
Length = 588
Score = 49.7 bits (117), Expect = 7e-04
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 5/156 (3%)
Frame = +1
Query: 311 CEICETMVKEV-TGLLESNKTEEEIVHEMEVVCY-LLPASVKDQCKDFIEVYGQALIDML 368
C C+ +V+++ T ++ + K + V + CY ++ A++ D C DF+++Y +I M
Sbjct: 82 CFECKFVVEDMQTDMITNRKKLSDDVRDF--ACYKIVTANMTDSCIDFLDLYLPTVIQMT 255
Query: 369 LEATNPEAVCVMLKCCAANXXX--XXXXXXXXAGGFCDICKMIVAYADKELEKNATTTEI 426
+E P+ VC+ KCC A+ C + Y L +A
Sbjct: 256 VEQATPQGVCLANKCCPASSVAPLRDFTFQEIQAEKCPKMMELETYLSSNLVGSAMEKFF 435
Query: 427 E-ALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLA 461
E +L E C L C Q + P V L A
Sbjct: 436 ENSLTETFCSGLLSFFQPSCQQIMSSVAPRFVSLTA 543
>emb|X56136.1|HVASPROT Barley mRNA for aspartic proteinase
Length = 1800
Score = 49.3 bits (116), Expect = 9e-04
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Frame = +3
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXX---------- 398
V +CK + YGQ ++D+LL T P+ +C + C +
Sbjct: 978 VSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSN 1157
Query: 399 ---AGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
A C C+M V + +L +N T I + ++C+ LP + + V
Sbjct: 1158 GLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAV 1310
Score = 43.9 bits (102), Expect = 0.038
Identities = 31/120 (25%), Positives = 56/120 (45%)
Frame = +3
Query: 236 MSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKM 295
+S CK+ +S+Y + +++ + QPK IC+ VG C + V A + V
Sbjct: 978 VSQECKTIVSQYGQQILDLLL--AETQPKKICSQVGLC----TFDGTRGVSAGIRSVVDD 1139
Query: 296 ETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKD 355
E V+ ++ +C CE V + L NKT++ I+ + +C LP+ + + D
Sbjct: 1140 EPVKSNGLRADP--MCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVD 1313
>dbj|D32144.1|RICAPA Rice mRNA for aspartic protease, complete cds
Length = 2030
Score = 49.3 bits (116), Expect = 9e-04
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Frame = +3
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXX---------- 398
V +CK + YGQ ++D+LL T P +C + C +
Sbjct: 999 VSQECKTVVSQYGQQILDLLLAETQPSKICSQVGLCTFDGKHGVSAGIKSVVDDEAGESN 1178
Query: 399 ---AGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
+G C+ C+M V + +L +N T I + ++C LP + + V
Sbjct: 1179 GLQSGPMCNACEMAVVWMQNQLAQNKTQDLILNYINQLCDKLPSPMGESSV 1331
Score = 43.5 bits (101), Expect = 0.049
Identities = 31/120 (25%), Positives = 56/120 (45%)
Frame = +3
Query: 236 MSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKM 295
+S CK+ +S+Y + +++ + QP IC+ VG C + + V A + V
Sbjct: 999 VSQECKTVVSQYGQQILDLLL--AETQPSKICSQVGLC----TFDGKHGVSAGIKSVVDD 1160
Query: 296 ETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKD 355
E E +Q +C CE V + L NKT++ I++ + +C LP+ + + D
Sbjct: 1161 EAGESNGLQSGP--MCNACEMAVVWMQNQLAQNKTQDLILNYINQLCDKLPSPMGESSVD 1334
>gb|U61396.1|VUU61396 Vigna unguiculata aspartic proteinase mRNA, complete cds
Length = 1842
Score = 48.9 bits (115), Expect = 0.001
Identities = 24/111 (21%), Positives = 49/111 (43%), Gaps = 13/111 (11%)
Frame = +1
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAAN---------XXXXXXXXXXXA 399
+ +CK + YGQ ++++LL T P+ +C + C + +
Sbjct: 1081 MSQECKTVVAEYGQTILNLLLAETQPKKICSQIGLCTFDGTRGVDMGIESVVDENARKSS 1260
Query: 400 GGF----CDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
GG C C+M V + +L +N T +I + + ++C +P+ + + V
Sbjct: 1261 GGLHDAGCSACEMAVVWVQNQLSRNQTQDQILSYVNQLCDKMPKPMGESSV 1413
Score = 42.4 bits (98), Expect = 0.11
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Frame = +1
Query: 236 MSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKM 295
MS CK+ ++EY + +++ + QPK IC+ +G C T + V ++ +
Sbjct: 1081 MSQECKTVVAEYGQTILNLLL--AETQPKKICSQIGLC---------TFDGTRGV-DMGI 1224
Query: 296 ETVEKATVQEKTFSV----CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLP 346
E+V ++ + + C CE V V L N+T+++I+ + +C +P
Sbjct: 1225 ESVVDENARKSSGGLHDAGCSACEMAVVWVQNQLSRNQTQDQILSYVNQLCDKMP 1389
>gb|AC012454.8| Homo sapiens BAC clone RP11-439L14 from 2, complete sequence
Length = 185512
Score = 48.9 bits (115), Expect = 0.001
Identities = 19/29 (65%), Positives = 21/29 (71%)
Frame = -2
Query: 26 CAKGPEVWCQSLRTASQCGAVKHCQQNVW 54
CA+GPE WCQSL A QC A+ HC Q VW
Sbjct: 59949 CAQGPEFWCQSLEQALQCRALGHCLQEVW 59863
Score = 45.1 bits (105), Expect = 0.017
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -2
Query: 488 ACVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
AC GP +WC+++E A QC A+ HC + VW
Sbjct: 59952 ACAQGPEFWCQSLEQALQCRALGHCLQEVW 59863
>gb|U40853.1|OCU40853 Oryctolagus cuniculus pulmonary surfactant protein B (SP-B) gene,
complete cds
Length = 9064
Score = 48.9 bits (115), Expect = 0.001
Identities = 19/29 (65%), Positives = 21/29 (71%)
Frame = +1
Query: 26 CAKGPEVWCQSLRTASQCGAVKHCQQNVW 54
CA+GPE WCQSL A QC A+ HC Q VW
Sbjct: 2617 CAQGPEFWCQSLEQALQCKALGHCLQEVW 2703
Score = 45.1 bits (105), Expect = 0.017
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 488 ACVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
AC GP +WC+++E A QC A+ HC + VW
Sbjct: 2614 ACAQGPEFWCQSLEQALQCKALGHCLQEVW 2703
>gb|M24461.1|HUMSPBAA Human pulmonary surfactant-associated protein SP-B (SFTP3) mRNA,
complete cds
Length = 10476
Score = 48.9 bits (115), Expect = 0.001
Identities = 19/29 (65%), Positives = 21/29 (71%)
Frame = +2
Query: 26 CAKGPEVWCQSLRTASQCGAVKHCQQNVW 54
CA+GPE WCQSL A QC A+ HC Q VW
Sbjct: 1457 CAQGPEFWCQSLEQALQCRALGHCLQEVW 1543
Score = 45.1 bits (105), Expect = 0.017
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 488 ACVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
AC GP +WC+++E A QC A+ HC + VW
Sbjct: 1454 ACAQGPEFWCQSLEQALQCRALGHCLQEVW 1543
>gb|AF400074.1|AF400074 Homo sapiens surfactant, pulmonary-associated protein B (SFTPB) gene,
complete cds
Length = 11807
Score = 48.9 bits (115), Expect = 0.001
Identities = 19/29 (65%), Positives = 21/29 (71%)
Frame = +3
Query: 26 CAKGPEVWCQSLRTASQCGAVKHCQQNVW 54
CA+GPE WCQSL A QC A+ HC Q VW
Sbjct: 1215 CAQGPEFWCQSLEQALQCRALGHCLQEVW 1301
Score = 45.1 bits (105), Expect = 0.017
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 488 ACVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
AC GP +WC+++E A QC A+ HC + VW
Sbjct: 1212 ACAQGPEFWCQSLEQALQCRALGHCLQEVW 1301
>dbj|AB045891.1|AB045891 Nepenthes alata NaAP1 mRNA for aspartic proteinase 1, complete cds
Length = 1802
Score = 48.5 bits (114), Expect = 0.002
Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Frame = +2
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXX-------------XX 395
V +CK + YG A++DML+ T P+ +C + C +
Sbjct: 1049 VSQECKAVVAQYGTAILDMLISETQPKKICSQIGLCTFDGKRGVSVGIKSVVDMNVDGSS 1228
Query: 396 XXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
C C+M V + +L++N T I + ++C+ LP + + V
Sbjct: 1229 SGLQDATCTACEMTVVWMQNQLKQNQTEERILNYVNELCNRLPSPMGESAV 1381
Score = 47.4 bits (111), Expect = 0.003
Identities = 32/124 (25%), Positives = 60/124 (47%), Gaps = 4/124 (3%)
Frame = +2
Query: 236 MSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCP----SVKSVPLQTLVPAQVVH 291
+S CK+ +++Y + M++ + QPK IC+ +G C SV ++++V V
Sbjct: 1049 VSQECKAVVAQYGTAILDMLI--SETQPKKICSQIGLCTFDGKRGVSVGIKSVVDMNV-- 1216
Query: 292 EVKMETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKD 351
+ +Q+ T C CE V + L+ N+TEE I++ + +C LP+ + +
Sbjct: 1217 -----DGSSSGLQDAT---CTACEMTVVWMQNQLKQNQTEERILNYVNELCNRLPSPMGE 1372
Query: 352 QCKD 355
D
Sbjct: 1373 SAVD 1384
>emb|X77260.1|BOASPR B. oleracea L. gene for aspartic protease (partial)
Length = 1121
Score = 48.5 bits (114), Expect = 0.002
Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 13/108 (12%)
Frame = +1
Query: 352 QCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAAN-------------XXXXXXXXXXX 398
QCK ++ YGQ ++D+LL T P+ +C + C +
Sbjct: 304 QCKTVVDQYGQTILDLLLSETQPKKICSQIGLCTFDGKRGVSMGIESVVDKENAKLSNGV 483
Query: 399 AGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
C C+M V + +L +N T I + ++C +P + + V
Sbjct: 484 GDAACSACEMAVVWIQSQLRQNMTQERILDYVNELCRRIPSPMGESAV 627
Score = 42.4 bits (98), Expect = 0.11
Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 5/164 (3%)
Frame = +1
Query: 197 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPG--MSDMCKSYISEYSDLAIQM 254
C+ + D ++ T + +++ HA +G S CK+ + +Y + +
Sbjct: 190 CESGCSAIADSGTSLLAGPTTIITMINHA------IGASGVASQQCKTVVDQYGQTILDL 351
Query: 255 MMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKMETVEKATVQEKT---FSVC 311
++ + QPK IC+ +G C T + V V+K + + C
Sbjct: 352 LL--SETQPKKICSQIGLC---------TFDGKRGVSMGIESVVDKENAKLSNGVGDAAC 498
Query: 312 EICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKD 355
CE V + L N T+E I+ + +C +P+ + + D
Sbjct: 499 SACEMAVVWIQSQLRQNMTQERILDYVNELCRRIPSPMGESAVD 630
>gb|AF082029.1|AF082029 Hemerocallis hybrid cultivar senescence-associated protein 4 (SA4)
mRNA, complete cds
Length = 1970
Score = 48.5 bits (114), Expect = 0.002
Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 11/109 (10%)
Frame = +3
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXX-----------XXXX 397
V +CK ++ YGQ ++DML+ T P +C + C +
Sbjct: 1032 VSQECKAVVQQYGQQILDMLIAQTQPMKICSQIGLCTFDGTRGVSMGIESVVNGNVDKSV 1211
Query: 398 XAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
+ C C+M V + +++ N T I + ++C LP + + V
Sbjct: 1212 ASDAMCSACEMAVVWMQNQIKHNKTQDLILNYINQLCERLPSPMGESAV 1358
Score = 43.1 bits (100), Expect = 0.064
Identities = 27/122 (22%), Positives = 56/122 (45%), Gaps = 2/122 (1%)
Frame = +3
Query: 236 MSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCP--SVKSVPLQTLVPAQVVHEV 293
+S CK+ + +Y + M++ QP IC+ +G C + V + + V
Sbjct: 1032 VSQECKAVVQQYGQQILDMLI--AQTQPMKICSQIGLCTFDGTRGVSMG-------IESV 1184
Query: 294 KMETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQC 353
V+K+ + ++C CE V + ++ NKT++ I++ + +C LP+ + +
Sbjct: 1185 VNGNVDKSVASD---AMCSACEMAVVWMQNQIKHNKTQDLILNYINQLCERLPSPMGESA 1355
Query: 354 KD 355
D
Sbjct: 1356 VD 1361
>dbj|AB045893.1|AB045893 Nepenthes alata NaAP3 mRNA for aspartic proteinase 3, complete cds
Length = 1753
Score = 48.5 bits (114), Expect = 0.002
Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 14/112 (12%)
Frame = +3
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCC--------------AANXXXXXXX 394
V ++CK + YGQ ++D+LL +PE +C + C +
Sbjct: 945 VSEECKAVVSQYGQTIMDLLLAEVSPEKICSQIGLCTFDGTRGVSIGIKSVVDKENNGKS 1124
Query: 395 XXXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
C C+M V + +LE+N T I + +C LP + + V
Sbjct: 1125 SGILRDALCPACEMAVVWMKSQLEQNQTQNLILNYVNDLCDQLPSPMGESAV 1280
Score = 43.5 bits (101), Expect = 0.049
Identities = 37/179 (20%), Positives = 77/179 (42%), Gaps = 4/179 (2%)
Frame = +3
Query: 191 KATEDVCQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPG--MSDMCKSYISEYS 248
KATE C+ + D ++ T V +++ HA +G +S+ CK+ +S+Y
Sbjct: 825 KATE-YCEGGCSAIADSGTSLLAGPTSVVTMINHA------IGATGVVSEECKAVVSQYG 983
Query: 249 DLAIQMMMHMKDQQPKDICAMVGFC--PSVKSVPLQTLVPAQVVHEVKMETVEKATVQEK 306
+ +++ + P+ IC+ +G C + V + + K + +
Sbjct: 984 QTIMDLLL--AEVSPEKICSQIGLCTFDGTRGVSIGIKSVVDKENNGKSSGILRD----- 1142
Query: 307 TFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALI 365
++C CE V + LE N+T+ I++ + +C LP+ + + D + A +
Sbjct: 1143--ALCPACEMAVVWMKSQLEQNQTQNLILNYVNDLCDQLPSPMGESAVDCARISSMATV 1313
>gb|S78114.1|S78114 surfactant protein B [mice, DBA/2J, liver, Genomic/mRNA, 11664 nt]
Length = 11664
Score = 48.1 bits (113), Expect = 0.002
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 25 DCAKGPEVWCQSLRTASQCGAVKHCQQNVW 54
+CA+GP+ WCQSL A QC A+ HC Q VW
Sbjct: 2188 ECAQGPQFWCQSLEHAVQCRALGHCLQEVW 2277
Score = 43.5 bits (101), Expect = 0.049
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 489 CVWGPGYWCKNMETAAQCNAVDHCRRHVW 517
C GP +WC+++E A QC A+ HC + VW
Sbjct: 2191 CAQGPQFWCQSLEHAVQCRALGHCLQEVW 2277
Score = 41.6 bits (96), Expect = 0.19
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 9/74 (12%)
Frame = +3
Query: 61 SIPCDLCK--ELVTVVGKVLKDNG-------TEDEIRSYLEKTCEFLPDQGLASECKEIV 111
++ CDL + T+VG L+ +++ IR +LE+ C+ LP + L C++++
Sbjct: 2883 TVQCDLVEAWRQGTLVGADLRKTRLILPSLLSQEAIRKFLEQECDILPLKLLVPRCRQVL 3062
Query: 112 DSYLPVIMDMIKEE 125
D YLP+++D + +
Sbjct: 3063 DVYLPLVIDYFQSQ 3104
>emb|AJ237674.1|CCA237674 Cynara cardunculus mRNA for preprocardosin B
Length = 1521
Score = 47.8 bits (112), Expect = 0.003
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Frame = +1
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXX----------XXXX 398
+ QCK + YG+ +I ML P+ +C +K C +
Sbjct: 946 LNQQCKTLVGQYGKNMIQMLTSEVQPDKICSHMKLCTFDGAHDVRSMIESVVDKNNDKSS 1125
Query: 399 AGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
G C C+M + E+++N T I + +VC LP S ++ V
Sbjct: 1126 GGEICTFCEMALVRMQNEIKRNETEDNIINHVNEVCDQLPTSSAESIV 1269
>dbj|D12777.1|RICASPPRO Rice mRNA for aspartic proteinase, complete cds
Length = 1774
Score = 47.0 bits (110), Expect = 0.004
Identities = 22/106 (20%), Positives = 46/106 (42%), Gaps = 8/106 (7%)
Frame = +1
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXX--------AG 400
+ +CK+ + YG+ ++++L+ T+P+ VC + C + +
Sbjct: 1003 ISTECKEVVSEYGEMILNLLIAQTDPQKVCSQVGLCMFDGKRSVSNGIESVVDKENLGSD 1182
Query: 401 GFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
C +C+M V + + +L +N T I ++C LP + V
Sbjct: 1183 AMCSVCEMAVVWIENQLRENKTKELILNYANQLCERLPSPNGESTV 1320
Score = 43.9 bits (102), Expect = 0.038
Identities = 27/112 (24%), Positives = 52/112 (46%)
Frame = +1
Query: 236 MSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKM 295
+S CK +SEY ++ + +++ D P+ +C+ VG C + + +
Sbjct: 1003 ISTECKEVVSEYGEMILNLLIAQTD--PQKVCSQVGLCMFDGKRSVSNGIES-------- 1152
Query: 296 ETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPA 347
V+K + ++C +CE V + L NKT+E I++ +C LP+
Sbjct: 1153 -VVDKENLGSD--AMCSVCEMAVVWIENQLRENKTKELILNYANQLCERLPS 1299
>gb|AF196308.1|AF196308 Naegleria fowleri naegleriapore A precursor (NP-A) gene, partial
cds
Length = 1097
Score = 46.6 bits (109), Expect = 0.006
Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 12/119 (10%)
Frame = +1
Query: 353 CKDFIEVYGQALIDMLLEATNPEAVCV-MLKCCAANXXXXXXXX-----------XXXAG 400
C + VYG L++ L+ NP VC L C N
Sbjct: 229 CNTVVLVYGNELVNALVTYENPTRVCSEQLPLCPKNNTVAVTPAPVVTVPKEEVKATAGD 408
Query: 401 GFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQL 459
C+ICK ++ + +E N + EI+ L K+C +P + C+ ++ +L
Sbjct: 409 AECEICKFVIQQVEAFIESNHSQAEIQKELNKLCSSVPSIFTQTCLSIARMVPYIIKKL 585
Score = 46.6 bits (109), Expect = 0.006
Identities = 33/127 (25%), Positives = 62/127 (47%), Gaps = 2/127 (1%)
Frame = +1
Query: 229 CDRLGPGM-SDMCKSYISEYSDLAIQMMMHMKDQQPKDICA-MVGFCPSVKSVPLQTLVP 286
C +LG +C + + Y + + ++ ++ P +C+ + CP +V + P
Sbjct: 193 CQQLGDNQFGKICNTVVLVYGNELVNALVTYEN--PTRVCSEQLPLCPKNNTV---AVTP 357
Query: 287 AQVVHEVKMETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLP 346
A VV K E KAT + + CEIC+ ++++V +ESN ++ EI E+ +C +P
Sbjct: 358 APVVTVPKEEV--KATAGD---AECEICKFVIQQVEAFIESNHSQAEIQKELNKLCSSVP 522
Query: 347 ASVKDQC 353
+ C
Sbjct: 523 SIFTQTC 543
>dbj|AB021787.1|AB021787 Pyrus pyrifolia PPFRU11 mRNA for aspartic endopeptidase, partial
cds
Length = 1028
Score = 46.2 bits (108), Expect = 0.008
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 9/121 (7%)
Frame = +1
Query: 236 MSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFC---------PSVKSVPLQTLVP 286
+S CK+ + +Y I+M+M QP+ IC+ +GFC P ++S+ Q
Sbjct: 238 VSQECKTVVEQYGKTIIEMLM--AKSQPQKICSQIGFCTFDGTRGVSPGIESLVDQN--- 402
Query: 287 AQVVHEVKMETVEKATVQEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLP 346
E + + V AT C CE V + L N+TEE+I+ + +C LP
Sbjct: 403 ----PEKQSDGVHDAT--------CAACEMPVVLMQIRLRKNQTEEQILDYVNQLCERLP 546
Query: 347 A 347
+
Sbjct: 547 S 549
Score = 44.7 bits (104), Expect = 0.022
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 13/112 (11%)
Frame = +1
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXX-------------XX 395
V +CK +E YG+ +I+ML+ + P+ +C + C +
Sbjct: 238 VSQECKTVVEQYGKTIIEMLMAKSQPQKICSQIGFCTFDGTRGVSPGIESLVDQNPEKQS 417
Query: 396 XXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQ 447
C C+M V L KN T +I + ++C LP + VQ
Sbjct: 418 DGVHDATCAACEMPVVLMQIRLRKNQTEEQILDYVNQLCERLPSPSGESVVQ 573
>dbj|AB045892.1|AB045892 Nepenthes alata NaAP2 mRNA for aspartic proteinase 2, complete cds
Length = 1839
Score = 45.4 bits (106), Expect = 0.013
Identities = 23/111 (20%), Positives = 44/111 (38%), Gaps = 13/111 (11%)
Frame = +1
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXX-------------XX 395
V +CK + YG+A++D L+ P+ +C + C +
Sbjct: 1027 VSQECKAVVSQYGKAILDALVAEAQPQKICSQIGLCTFDGKRGVSMGIESVVEKNPGNSS 1206
Query: 396 XXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
C C+M V + +L +N T +I + ++C+ LP + + V
Sbjct: 1207 DGLQDAMCTACEMAVVWMQNQLRQNRTEEQILNYVNELCNRLPSPMGESSV 1359
Score = 37.4 bits (85), Expect = 3.5
Identities = 38/173 (21%), Positives = 70/173 (39%), Gaps = 4/173 (2%)
Frame = +1
Query: 103 LASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSLQKHLAAMKLQKQLQSNKIPE 162
++ ECK +V Y I+D + E +P+ +CS + LC K +M ++ ++ N
Sbjct: 1027 VSQECKAVVSQYGKAILDALVAEA-QPQKICSQIGLCTFDGKRGVSMGIESVVEKN---- 1191
Query: 163 LDFSELTSPFMANVPLLLYPQDKPKQKSKATED-VCQDCIRLVTDVQEAVRTNATFVKSL 221
P S +D +C C V +Q +R N T + +
Sbjct: 1192 -----------------------PGNSSDGLQDAMCTACEMAVVWMQNQLRQNRT-EEQI 1299
Query: 222 VAHAKEECDRLGPGMSDM---CKSYISEYSDLAIQMMMHMKDQQPKDICAMVG 271
+ + E C+RL M + C S +S ++++ + + D P+ VG
Sbjct: 1300 LNYVNELCNRLPSPMGESSVDCGS-LSSMPNVSLTIGGKVFDLSPEKYVLKVG 1455
>ref|NM_116684.1| Arabidopsis thaliana chromosome 4 CHR4v12152001 genomic sequence
Length = 1677
Score = 44.3 bits (103), Expect = 0.029
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 10/100 (10%)
Frame = +3
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXXA--------- 399
V +CK ++ YG+ +++ LL +P+ VC + CA +
Sbjct: 993 VSRECKAVVDQYGKTMLNSLLAQEDPKKVCSQIGVCAYDGTQSVSMGIQSVVDDGTSGLL 1172
Query: 400 -GGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLP 438
C C+M + + EL +N T I A ++C +P
Sbjct: 1173 NQAMCSACEMAAVWMESELTQNQTQERILAYAAELCDHIP 1292
>gb|AF372974.1|AF372974 Arabidopsis thaliana AT4g04460/T26N6_7 mRNA, complete cds
Length = 1677
Score = 44.3 bits (103), Expect = 0.029
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 10/100 (10%)
Frame = +3
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXXXXXXA--------- 399
V +CK ++ YG+ +++ LL +P+ VC + CA +
Sbjct: 993 VSRECKAVVDQYGKTMLNSLLAQEDPKKVCSQIGVCAYDGTQSVSMGIQSVVDDGTSGLL 1172
Query: 400 -GGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLP 438
C C+M + + EL +N T I A ++C +P
Sbjct: 1173 NQAMCSACEMAAVWMESELTQNQTQERILAYAAELCDHIP 1292
>gb|U40797.2| Caenorhabditis elegans cosmid C28C12, complete sequence
Length = 37889
Score = 44.3 bits (103), Expect = 0.029
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 339 EVVCY-LLPASVKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAAN 387
+ CY ++ A++ D C DF+++Y +I M +E P+ VC+ KCC A+
Sbjct: 7276 DFACYKIVTANMTDSCIDFLDLYLPTVIQMTVEQATPQGVCLANKCCPAS 7425
>gb|AF175577.1|AF175577 Tripedalia cystophora J3-crystallin mRNA, complete cds
Length = 1787
Score = 43.9 bits (102), Expect = 0.038
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +2
Query: 403 CDICKMIVAYADKELEK-NATTTEIEALLEKVCHFLPE--SVSDQCVQFVEQYEPVVVQL 459
CDIC+ + D L N T EI+ L+ C F+ SV +C V Q E V +L
Sbjct: 473 CDICRATIQIVDSSLAIFNYTELEIDKLVMLSCKFMSSWGSVQKECENIVRQVERVE-RL 649
Query: 460 LAEMMDPTFVCTKLGVCGAAKK 481
L + + P VC LG C +K+
Sbjct: 650 LMKDLSPGDVCAVLGYCNYSKE 715
>dbj|AB070857.1|AB070857 Glycine max sapa mRNA for aspartic proteinase alpha, complete cds
Length = 1861
Score = 43.5 bits (101), Expect = 0.049
Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 6/118 (5%)
Frame = +1
Query: 236 MSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKM 295
+S CK +S+Y +L +++ +P DIC+ VG C S + H+ K
Sbjct: 1048 LSVECKEVVSQYGELIWDLLV--SGVKPDDICSQVGLCSSKR-------------HQSKS 1182
Query: 296 ETVEKATVQE------KTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPA 347
+E T +E + +C C+ +V + L+ T++ + + + +C LP+
Sbjct: 1183 AGIEMVTEKEQEELAARDTPLCSSCQMLVLWIQNQLKQKATKDRVFNYVNQLCESLPS 1356
Score = 42.7 bits (99), Expect = 0.084
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 18/158 (11%)
Frame = +1
Query: 103 LASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLCQSL--QKHLAAMKLQKQLQSNKI 160
L+ ECKE+V Y +I D++ KP+ +CS + LC S Q A +++ + + ++
Sbjct: 1048 LSVECKEVVSQYGELIWDLLVSGV-KPDDICSQVGLCSSKRHQSKSAGIEMVTEKEQEEL 1224
Query: 161 PELDFSELTSPFMANVPLLLYPQDKPKQKSKATED-----VCQDCIRLVTDVQEAV---- 211
D +S M L+L+ Q++ KQ KAT+D V Q C L + E+V
Sbjct: 1225 AARDTPLCSSCQM----LVLWIQNQLKQ--KATKDRVFNYVNQLCESLPSPSGESVISCN 1386
Query: 212 ----RTNATFV---KSLVAHAKEECDRLGPGMSDMCKS 242
N TF K V ++ R G G++++C S
Sbjct: 1387 SLSKMPNITFTIGNKPFVLTPEQYILRTGEGITEVCLS 1500
Score = 42.0 bits (97), Expect = 0.14
Identities = 19/107 (17%), Positives = 43/107 (39%), Gaps = 12/107 (11%)
Frame = +1
Query: 352 QCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXX------------XXXXA 399
+CK+ + YG+ + D+L+ P+ +C + C++
Sbjct: 1057 ECKEVVSQYGELIWDLLVSGVKPDDICSQVGLCSSKRHQSKSAGIEMVTEKEQEELAARD 1236
Query: 400 GGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
C C+M+V + +L++ AT + + ++C LP + +
Sbjct: 1237 TPLCSSCQMLVLWIQNQLKQKATKDRVFNYVNQLCESLPSPSGESVI 1377
>dbj|AB024999.1|AB024999 Cicer arietinum mRNA for aspartic proteinase, partial cds
Length = 697
Score = 43.5 bits (101), Expect = 0.049
Identities = 20/107 (18%), Positives = 42/107 (38%), Gaps = 12/107 (11%)
Frame = +3
Query: 352 QCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXX------------XXXXA 399
+CK+ + YG+ + D+L+ NP +C + C+
Sbjct: 45 ECKEVVSQYGELIWDLLVSGVNPGDICSQVGLCSVRSDQSKSAGIEMVTENKQSEMSATD 224
Query: 400 GGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
C C+M+V + +L++ AT + + ++C LP + +
Sbjct: 225 TPLCSSCQMLVIWVQNQLKQKATKERVFNYVNQLCESLPSPSGESVI 365
Score = 42.0 bits (97), Expect = 0.14
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = +3
Query: 236 MSDMCKSYISEYSDLAIQMMMHMKDQQPKDICAMVGFCPSVKSVPLQTLVPAQVVHEVKM 295
+S CK +S+Y +L +++ P DIC+ VG C SV+S ++ ++M
Sbjct: 36 LSVECKEVVSQYGELIWDLLV--SGVNPGDICSQVGLC-SVRSDQSKSA-------GIEM 185
Query: 296 ETVEKATVQEKTFS-VCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPA 347
T K + T + +C C+ +V V L+ T+E + + + +C LP+
Sbjct: 186 VTENKQSEMSATDTPLCSSCQMLVIWVQNQLKQKATKERVFNYVNQLCESLPS 344
>gb|AF076636.1|AF076636 Ovis aries clone SP-B 75-2 pulmonary surfactant-associated protein
B precursor (SP-B) mRNA, partial cds
Length = 705
Score = 42.0 bits (97), Expect = 0.14
Identities = 35/150 (23%), Positives = 55/150 (36%), Gaps = 8/150 (5%)
Frame = +1
Query: 354 KDFIEVYGQALIDMLLEATNPEAVC-VMLKCCAANXXXXXXXXXXXAGGF-------CDI 405
K +E Y L+D LL P+ VC ++L+C + + G C +
Sbjct: 196 KCLVERYSVILLDTLLGRMLPQLVCGLVLRCSSEDSAGPALPALGSLPGEWLPQDSECQL 375
Query: 406 CKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVVVQLLAEMMD 465
C + A E+ +A L +C QFVE++ P + L++ D
Sbjct: 376 CMFVTTQAGNSSEQAMPQAMRQACLGTWLD------RQKCEQFVEEHAPRLQTLVSSGWD 537
Query: 466 PTFVCTKLGVCGAAKKPLLGDDACVWGPGY 495
C LG C PL C+ P +
Sbjct: 538 AHMACQALGTCATPFSPL----QCIHSPHF 615
>emb|AJ132884.1|CCA132884 Cynara cardunculus mRNA for preprocardosin A
Length = 1515
Score = 41.6 bits (96), Expect = 0.19
Identities = 24/105 (22%), Positives = 42/105 (39%), Gaps = 13/105 (12%)
Frame = +1
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXX---------XXXXA 399
+ QCK + YG+ +I+ML P+ +C +K C + +
Sbjct: 934 MNQQCKTVVSRYGRDIIEMLRSKIQPDKICSHMKLCTFDGARDVSSIIESVVDKNNDKSS 1113
Query: 400 GG----FCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPES 440
GG C C+M V + E++++ T I ++C L S
Sbjct: 1114 GGIHDEMCTFCEMAVVWMQNEIKQSETEDNIINYANELCEHLSTS 1248
>gb|L38775.1|PS30007E Pisolithus tinctorius (F00041) mRNA, EST0007
Length = 388
Score = 41.6 bits (96), Expect = 0.19
Identities = 25/78 (32%), Positives = 41/78 (52%)
Frame = +2
Query: 64 CDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIK 123
C+LC V+ V LKD T+ +I L K C + + A +CK +V Y P+++
Sbjct: 32 CELCHHAVSEVLDKLKDPDTQMDIIQILLKACNSM--ESYAKKCKRMVFEYGPLVL-ANA 202
Query: 124 EEFDKPEVVCSALSLCQS 141
+EF + VC+ L C++
Sbjct: 203 DEFLEANDVCTTLHACKA 256
Score = 36.2 bits (82), Expect = 7.8
Identities = 21/77 (27%), Positives = 34/77 (43%)
Frame = +2
Query: 311 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 370
CE+C V EV L+ T+ +I+ + C + + K +CK + YG ++ E
Sbjct: 32 CELCHHAVSEVLDKLKDPDTQMDIIQILLKACNSMESYAK-KCKRMVFEYGPLVLANADE 208
Query: 371 ATNPEAVCVMLKCCAAN 387
VC L C A+
Sbjct: 209 FLEANDVCTTLHACKAS 259
>gb|AF362767.1|AF362767 Paragonimus westermani clone NJS459 unknown mRNA
Length = 394
Score = 41.2 bits (95), Expect = 0.24
Identities = 25/92 (27%), Positives = 46/92 (49%), Gaps = 2/92 (2%)
Frame = +2
Query: 64 CDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIK 123
CD+CK+ V + LK + + ++L K C+ L A CK+ + + + D I+
Sbjct: 83 CDVCKQTVKTLQDGLKTGILQQLLENFLTKQCDSL--GSFAKVCKKAISKGITFLSDQIQ 256
Query: 124 EEFDKPEVVCSALSLCQSL--QKHLAAMKLQK 153
+ +PE C + LC +L QK+L +++
Sbjct: 257 KR--EPEETCKKIHLC*TLPCQKNLFVTMMRR 346
>dbj|AB045894.1|AB045894 Nepenthes alata NaAP4 mRNA for aspartic proteinase 4, complete cds
Length = 1856
Score = 40.4 bits (93), Expect = 0.41
Identities = 21/107 (19%), Positives = 42/107 (38%), Gaps = 12/107 (11%)
Frame = +2
Query: 352 QCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXX-----------XXXXXXAG 400
+CK+ + YG + D+L+ P+ +C L C + A
Sbjct: 1049 ECKEVVYQYGDMIWDLLVSGVQPDKICSQLALCFNDAQFLSIGIKTVIERENRKNSSVAD 1228
Query: 401 GF-CDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
F C C+M V + +L + T ++ + ++C LP + + +
Sbjct: 1229 DFLCTACEMAVVWIQNQLRREVTKEKVLNYINELCDSLPSPMGESVI 1369
>gb|M60259.1|HUMSAPE1 Human mutant cerebroside sulfate activator protein (SAP-MU) gene,
exon with mutation
Length = 704
Score = 40.4 bits (93), Expect = 0.41
Identities = 16/23 (69%), Positives = 21/23 (90%)
Frame = +3
Query: 236 MSDMCKSYISEYSDLAIQMMMHM 258
+S CK+YIS+YS++AIQMMMHM
Sbjct: 246 LSPQCKNYISQYSEIAIQMMMHM 314
>gb|L46681.1|TOMAPP Lycopersicon esculentum aspartic protease precursor mRNA, complete
cds
Length = 1740
Score = 39.3 bits (90), Expect = 0.92
Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 12/110 (10%)
Frame = +1
Query: 349 VKDQCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXXXXXXX------------XX 396
V +CK + YG+ + D+L+ P+ VC C +
Sbjct: 958 VSMECKTIVSQYGEMIWDLLVSGIRPDQVCSQAGLCFLDGSQHVSSNIRTVVERETEGSS 1137
Query: 397 XXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCV 446
C C+M V + +L++ T ++ + ++C +P + + +
Sbjct: 1138 VGEAPLCTACEMAVVWMQNQLKQEQTKEKVLEYVNQLCEKIPSPMGESAI 1287
>gb|AF082528.1|AF082528 Entamoeba dispar strain SAW 142 pore-forming protein isoform B
precursor (Dp-B) mRNA, complete cds
Length = 357
Score = 39.3 bits (90), Expect = 0.92
Identities = 22/79 (27%), Positives = 42/79 (52%)
Frame = +1
Query: 61 SIPCDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMD 120
SI C+LCK+ V ++ +L +G + +R Y++ C D L + C +I+ + ++
Sbjct: 82 SILCNLCKDTVNLIENLLTVDGAQ-AVRQYIDNLCA-KADGFLGTLCNKILSFGVDELVK 255
Query: 121 MIKEEFDKPEVVCSALSLC 139
+I+ D P V+C + C
Sbjct: 256 LIENHVD-PVVICEKIHAC 309
>gb|AF259982.1|AF259982 Ipomoea batatas putative aspartic protease mRNA, complete cds
Length = 1565
Score = 38.1 bits (87), Expect = 2.1
Identities = 23/107 (21%), Positives = 43/107 (39%), Gaps = 15/107 (14%)
Frame = +2
Query: 352 QCKDFIEVYGQALIDMLLEATNPEAVCVMLKCCAANXX-----------XXXXXXXXXAG 400
+CK+ + YG+ + D+L+ + VC L C N +
Sbjct: 986 ECKEVVSEYGEMIWDLLVSGLRADQVCSELGLCFLNGAWHESSIIKTVVEKEAEGNLTSN 1165
Query: 401 GFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLP----ESVSD 443
C C+M V + +L++ ++ ++++C LP ESV D
Sbjct: 1166 PLCTTCEMAVIWLQNQLKQKGIKEKVFEYVDQLCEKLPSPDGESVID 1306
Score = 37.7 bits (86), Expect = 2.7
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 22/166 (13%)
Frame = +2
Query: 99 PDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSLC--------QSLQKHLAAMK 150
P+ + +ECKE+V Y +I D++ + + VCS L LC S+ K + +
Sbjct: 965 PEGVVCAECKEVVSEYGEMIWDLLVSGL-RADQVCSELGLCFLNGAWHESSIIKTVVEKE 1141
Query: 151 LQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQ---KSKATEDVCQDCIRLVTDV 207
+ L SN + T+ MA +++ Q++ KQ K K E V Q C +L +
Sbjct: 1142 AEGNLTSNPL-------CTTCEMA----VIWLQNQLKQKGIKEKVFEYVDQLCEKLPSPD 1288
Query: 208 QEAV--------RTNATFV---KSLVAHAKEECDRLGPGMSDMCKS 242
E+V N TFV K V ++ + G G++ +C S
Sbjct: 1289 GESVIDCNSISSMPNVTFVIGDKDFVLTPEQYILKTGEGIAAVCVS 1426
>gb|AF069392.3|AF069392 Vibrio parahaemolyticus polar flagellar and chemotaxis genes, complete
cds; and unknown genes
Length = 39101
Score = 37.0 bits (84), Expect = 4.6
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -2
Query: 159 KIPELDFSELTSPFMANVPLLLYPQDKPKQKSKATEDVCQDCIRL 203
+IP L F+ TSP NVPL D P ++S +T + +C RL
Sbjct: 22012 RIPNLSFTTTTSPCAINVPLTKTSSDSPARRSSSTTEPWFNCNRL 21878
>ref|NM_077493.1| sphingomyelin phosphodiesterase
Length = 1719
Score = 37.0 bits (84), Expect = 4.6
Identities = 23/96 (23%), Positives = 44/96 (44%), Gaps = 1/96 (1%)
Frame = +1
Query: 55 SKPAVNSIPCDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSY 114
++P + C C V V ++ N T++EI ++L C+ D CK I+ ++
Sbjct: 187 NEPENRKMSCLFCTFAVDGVQALIAQNSTDNEIAAFLVNLCDLF-DVEQPHVCKNIIYAF 363
Query: 115 LPVIMDMIKEEFDKPEVVCSA-LSLCQSLQKHLAAM 149
++ +++ PE +C A ++ C K L M
Sbjct: 364 KDEVVFVLERSVFTPEEICGAFIANCGHSDKPLTHM 471
>emb|Z32532.1|SMLGGR S.mansoni (Liberian) LGG mRNA
Length = 626
Score = 36.6 bits (83), Expect = 6.0
Identities = 35/161 (21%), Positives = 60/161 (36%), Gaps = 9/161 (5%)
Frame = +1
Query: 325 LESNKTEEEIVHEMEVVCYLLPASVKD-----QCKDFIEVYGQALIDMLLEATNPEAVCV 379
L+ K E+ I + +E + + +VKD QCK + + L+ +E +
Sbjct: 106 LQIMKEEQFIGNMVEYLVSITCDNVKDLNKRLQCKTSMATEARILVQYFIEFIESYRLKT 285
Query: 380 MLKCCAANXXXXXXXXXXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPE 439
ML C + C C+M VAY + + ++K+C L
Sbjct: 286 MLNWCQSTLERPQYGNSSF---LCSTCEMAVAYLKTFSKSEEAKAIVHQAVDKICS-LTG 453
Query: 440 SVSDQCV----QFVEQYEPVVVQLLAEMMDPTFVCTKLGVC 476
S QC F+++Y + MDP C + +C
Sbjct: 454 SFEVQCSFLGGMFIDKYIDTI-----STMDPDSACMTMHMC 561
>gb|U10431.1|SMU10431 Schistosoma mansoni LGG mRNA, complete cds
Length = 756
Score = 36.6 bits (83), Expect = 6.0
Identities = 35/161 (21%), Positives = 60/161 (36%), Gaps = 9/161 (5%)
Frame = +2
Query: 325 LESNKTEEEIVHEMEVVCYLLPASVKD-----QCKDFIEVYGQALIDMLLEATNPEAVCV 379
L+ K E+ I + +E + + +VKD QCK + + L+ +E +
Sbjct: 131 LQIMKEEQFIGNMVEYLVSITCDNVKDLNKRLQCKTSMATEARILVQYFIEFIESYRLKT 310
Query: 380 MLKCCAANXXXXXXXXXXXAGGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPE 439
ML C + C C+M VAY + + ++K+C L
Sbjct: 311 MLNWCQSTLERPQYGNSSF---LCSTCEMAVAYLKTFSKSEEAKAIVHQAVDKICS-LTG 478
Query: 440 SVSDQCV----QFVEQYEPVVVQLLAEMMDPTFVCTKLGVC 476
S QC F+++Y + MDP C + +C
Sbjct: 479 SFEVQCSFLGGMFIDKYIDTI-----STMDPDSACMTMHMC 586
>emb|X76904.1|EHAPBG E.histolytica gene for amoebapore B
Length = 594
Score = 36.2 bits (82), Expect = 7.8
Identities = 22/79 (27%), Positives = 42/79 (52%)
Frame = +2
Query: 61 SIPCDLCKELVTVVGKVLKDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMD 120
+I C+LCK+ V +V +L +G + +R Y++ C L + C++I+ + ++
Sbjct: 203 AILCNLCKDTVKLVENLLTVDGAQ-AVRQYIDNLCG-KASGFLGTLCEKILSFGVDELVK 376
Query: 121 MIKEEFDKPEVVCSALSLC 139
+I+ D P VVC + C
Sbjct: 377 LIENHVD-PVVVCEKIHAC 430
>ref|NM_059402.1| Caenorhabditis elegans
Length = 357
Score = 36.2 bits (82), Expect = 7.8
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 403 CDICKMIVAYADKELEKNATTTEIEALLEKVC-HFLPESVSDQCVQFVEQYEPVVVQLLA 461
C +C +V D+ LE +IEA ++K C +P + D C + +E+ ++ L
Sbjct: 100 CGLCVNVVKQLDQVLEHGG---DIEAAVDKFCKEDVPSFMVDMCEKVIEKNLEYIINKLK 270
Query: 462 EMMDPTFVCTKLGVCGAAKK 481
+ + +CT + +C K+
Sbjct: 271 DHEEADKICTDILLCRTPKQ 330
>emb|X85431.1|SSNKLYSIN S.scrofa mRNA for NK-lysin
Length = 780
Score = 36.2 bits (82), Expect = 7.8
Identities = 16/81 (19%), Positives = 39/81 (47%)
Frame = +3
Query: 304 QEKTFSVCEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQA 363
+E+ +CE C +++++ ++ E+ + VC + ++ CK + + +
Sbjct: 348 REELGLICESCRKIIQKLEDMVGPQPNEDTVTQAASRVCDKMKI-LRGVCKKIMRTFLRR 524
Query: 364 LIDMLLEATNPEAVCVMLKCC 384
+ +L P+A+CV +K C
Sbjct: 525 ISKDILTGKKPQAICVDIKIC 587
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 19, 2002 12:00 AM
Number of letters in database: 587,334,133
Number of sequences in database: 1,164,257
Lambda K H
0.320 0.133 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,047,020,678
Number of Sequences: 1164257
Number of extensions: 46345754
Number of successful extensions: 216633
Number of sequences better than 10.0: 250
Number of HSP's better than 10.0 without gapping: 39385
Number of HSP's successfully gapped in prelim test: 11053
Number of HSP's that attempted gapping in prelim test: 143893
Number of HSP's gapped (non-prelim): 120590
length of query: 518
length of database: 1,627,433,809
effective HSP length: 140
effective length of query: 378
effective length of database: 1,464,437,829
effective search space: 553557499362
effective search space used: 553557499362
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)