TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(487 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,164,257 sequences; 587,334,133 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
emb|Y12012.1|GGCD4 G.gallus CD4 mRNA 942 0.0
gb|AF378701.1|AF378701 Anas platyrhynchos T-cell surface gl... 550 e-154
ref|NM_012705.1| Rattus norvegicus CD4 antigen (p55) (Cd4),... 114 3e-23
gb|M15768.1|RATCD4A Rat W3/25 antigen (homologue of human C... 114 3e-23
ref|NM_013488.1| Mus musculus CD4 antigen (Cd4), mRNA 113 5e-23
emb|X04836.1|MMCD4R Mouse mRNA for T-cell surface glycoprot... 113 5e-23
gb|M36850.1|MUSL3T4AA Mouse T-cell differentiation antigen ... 113 5e-23
gb|M13816.1|MUSATCL3T Mouse T-cell surface antigen L3T4 mRN... 113 5e-23
gb|AF045882.1|AF045882 Mus musculus T4 surface glycoprotein... 110 2e-22
gb|M92840.1|RABCD4 Oryctolagus cuniculus cell surface glyco... 109 5e-22
gb|AF071799.1|AF071799 Delphinapterus leucas T-cell surface... 99 7e-19
gb|M35160.1|HUMATCT4A Human T4 surface glycoprotein CD4 gen... 89 9e-16
gb|M31135.1|CHPCD4A Chimpanzee lymphocyte antigen CD4 mRNA,... 89 1e-15
ref|XM_006966.2| Homo sapiens CD4 antigen (p55) (CD4), mRNA 88 2e-15
ref|NM_000616.1| Homo sapiens CD4 antigen (p55) (CD4), mRNA 88 2e-15
gb|M12807.1|HUMATCT4 Human T-cell surface glycoprotein T4 m... 88 2e-15
gb|L06130.1|DOGCD4 Canis familiaris CD4 antigen mRNA, compl... 84 2e-14
dbj|D63347.1|MACCD4 Rhesus monkey mRNA for CD4, complete cds 82 1e-13
dbj|D86588.1|D86588 Squirrel monkey mRNA for CD4, complete cds 82 1e-13
dbj|D63349.1|D63349 Macaca fascicularis mRNA for CD4 precur... 80 6e-13
dbj|D86589.1|D86589 African green monkey mRNA for CD4, comp... 79 1e-12
dbj|D63346.1|D63346 Macaca nemestrina mRNA for precursor CD... 79 1e-12
gb|M31134.1|MACCD4A Rhesus monkey lymphocyte antigen CD4 mR... 79 1e-12
dbj|D63348.1|D63348 Macaca fuscata mRNA for precursor CD4, ... 78 2e-12
dbj|AB000483.1|AB000483 Felis catus mRNA for CD4 antigen, c... 77 5e-12
emb|X68565.1|CFCD4 C.familiaris mRNA for T-cell surface gly... 74 2e-11
emb|X73323.1|PTCD4 P.troglodytes CD4 mRNA 71 2e-10
gb|AF001221.1|AF001221 Cercopithecus tantalus CD4 (CD4) mRN... 65 1e-08
emb|X73327.1|CACD41 C.atys CD4 mRNA 1 65 1e-08
emb|X73328.1|CACD42 C.atys CD4 mRNA 2 65 2e-08
gb|AF001222.1|AF001222 Cercopithecus tantalus CD4 (CD4) mRN... 64 2e-08
gb|AF001223.1|AF001223 Cercopithecus sabaeus CD4 (CD4) mRNA... 64 4e-08
gb|AF001224.1|AF001224 Cercopithecus sabaeus CD4 (CD4) mRNA... 63 6e-08
gb|AF001228.1| Cercopithecus aethiops (Barbados) CD4 (CD4) ... 63 7e-08
gb|AF001227.1|AF001227 Cercopithecus pygerythrus CD4 (CD4) ... 63 7e-08
gb|AF001225.1|AF001225 Cercopithecus sabaeus CD4 (CD4) mRNA... 63 7e-08
emb|X73325.1|MNCD4 M.nemestrina CD4 mRNA 63 7e-08
emb|X73322.1|CACD4 C.aethiops CD4 mRNA 63 7e-08
emb|X73326.1|MMCD4 M.mulatta CD4 mRNA 62 1e-07
gb|AF001226.1|AF001226 Cercopithecus aethiops CD4 (CD4) mRN... 62 2e-07
emb|X73324.1|EPCD4 E.patas CD4 mRNA 61 2e-07
ref|NM_008479.1| Mus musculus lymphocyte-activation gene 3 ... 51 3e-04
emb|X98113.1|MMLAG3 M.musculus mRNA for LAG-3-like cell sur... 51 3e-04
gb|L38966.1|GINANREFRB Ginglymostoma cirratum (clone JIIR11... 44 0.026
ref|XM_079998.1| Lachesin, mRNA 40 0.38
gb|AY051829.1| Drosophila melanogaster LD33460 full length ... 40 0.38
ref|NM_078989.1| Drosophila melanogaster Lachesin (Lac), mRNA 40 0.38
gb|L13255.1|DROLACH Fruitfly lachesin mRNA, complete cds 40 0.38
ref|NM_017358.1| Rattus norvegicus immunoglobulin superfami... 39 0.85
gb|AF004840.1|AF004840 Rattus norvegicus CDO (cdo) mRNA, co... 39 0.85
ref|NM_077235.1| Ig superfamily repeats (I-type) 39 0.85
ref|NM_077234.1| IG (immunoglobulin) superfamily (47 domains) 39 0.85
gb|AF074901.1|AF074901 Caenorhabditis elegans hemicentin pr... 39 0.85
emb|AJ002535.1|HSAJ2535 Homo sapiens mRNA for obscurin (OBS... 39 1.1
ref|NM_019086.1| Homo sapiens hypothetical protein FLJ20674... 39 1.5
dbj|AK000681.1|AK000681 Homo sapiens cDNA FLJ20674 fis, clo... 39 1.5
gb|AF101164.1|AF101164 Mus musculus biliary glycoprotein 2 ... 38 1.9
ref|XM_100814.1| Homo sapiens LOC160278 (LOC160278), mRNA 38 2.5
gb|AC010767.7| Homo sapiens chromosome 17, clone RP11-188K1... 38 2.5
ref|NM_000566.1| Homo sapiens Fc fragment of IgG, high affi... 37 3.2
emb|X14355.1|HSFCRIB Human mRNA for high affinity Fc recept... 37 3.2
gb|L03418.1|HUMIGGFCIA Human Fc-gamma receptor I A1 mRNA, c... 37 3.2
emb|X14356.1|HSFCRI Human mRNA for high affinity Fc recepto... 37 3.2
ref|NM_022954.1| Rattus norvegicus MEGF1 (Fat2), mRNA 37 3.2
dbj|AB011527.1|AB011527 Rattus norvegicus mRNA for MEGF1, c... 37 3.2
gb|L11311.1|FSCTRKA Torpedo californica receptor tyrosine k... 37 3.2
gb|AY014883.1| Mus musculus monoclonal antibody F23.1 heavy... 37 3.2
gb|M64355.1|HUMTCRALPH Human TCR-alpha V14 subfamily (VA14,... 37 3.2
ref|NM_007543.1| Mus musculus CEA-related cell adhesion mol... 37 4.2
emb|X76085.1|MMBGP2 M.musculus (BALB/c, C57Bl/6) Bgp2 mRNA ... 37 4.2
emb|AL591674.3|AL591674 Zebrafish DNA sequence from clone X... 37 5.5
ref|XM_053096.3| Homo sapiens hypothetical gene supported b... 37 5.5
gb|AC093373.2| Homo sapiens BAC clone RP13-516J8 from 2, co... 37 5.5
gb|AF230073.1|AF230073 Homo sapiens sialoadhesin mRNA, comp... 37 5.5
ref|XM_047536.2| Homo sapiens obscurin, cytoskeletal calmod... 37 5.5
gb|L21719.1|CHKCEYKONC Chicken c-eyk proto-oncogene mRNA, c... 37 5.5
dbj|AB046788.1|AB046788 Homo sapiens mRNA for KIAA1568 prot... 37 5.5
ref|NM_001447.1| Homo sapiens FAT tumor suppressor homolog ... 37 5.5
gb|AF231022.1|AF231022 Homo sapiens protocadherin Fat 2 (FA... 37 5.5
ref|NM_023068.1| Homo sapiens sialoadhesin (SN), mRNA 37 5.5
gb|L03419.1|HUMFCGR1B Human Fc-gamma receptor I B1 mRNA, co... 37 5.5
ref|XM_041971.3| Homo sapiens FAT tumor suppressor homolog ... 37 5.5
dbj|D49579.1|PIGRTCRD20 Pig mRNA for rearranged T-cell rece... 37 5.5
dbj|AB050468.1|AB050468 Homo sapiens mRNA for membrane glyc... 36 7.2
gb|AF287912.1|AF287912 Mus musculus CEA-related cell adhesi... 36 7.2
emb|AL117666.1|HSM801204 Homo sapiens mRNA; cDNA DKFZp586O1... 36 7.2
ref|NM_065269.1| Caenorhabditis elegans 36 7.2
gb|AF153446.1|AF153446 Danio rerio kit receptor tyrosine ki... 36 7.2
gb|AF381545.1|AF381545 Homo sapiens membrane glycoprotein L... 36 7.2
ref|XM_033712.3| Homo sapiens ortholog of mouse integral me... 36 7.2
ref|NM_008478.2| Mus musculus L1 cell adhesion molecule (L1... 36 9.4
ref|NM_002020.1| Homo sapiens fms-related tyrosine kinase 4... 36 9.4
emb|X12875.1|MMNCAML1 Mouse mRNA for neural cell adhesion m... 36 9.4
emb|X69878.1|HSFLT4X H.sapiens Flt4 mRNA for transmembrane ... 36 9.4
emb|X68203.1|HSFLT4 H.sapiens mRNA for FLT4, class III rece... 36 9.4
gb|L34703.1|HUMTCRAZ Homo sapiens T-cell receptor alpha cha... 36 9.4
ref|XM_044114.2| Homo sapiens fms-related tyrosine kinase 4... 36 9.4
gb|U43143.1|HSU43143 Human receptor tyrosine kinase Flt4 (s... 36 9.4
>emb|Y12012.1|GGCD4 G.gallus CD4 mRNA
Length = 1989
Score = 942 bits (2435), Expect = 0.0
Identities = 469/487 (96%), Positives = 469/487 (96%)
Frame = +2
Query: 1 MERCGAVVSCVFAVILVLQLGLTPIMAQQEQQIGIAGKEVILSCKAINNQKDGTCTWKYK 60
MERCGAVVSCVFAVILVLQLGLTPIMAQQEQQIGIAGKEVILSCKAINNQKDGTCTWKYK
Sbjct: 143 MERCGAVVSCVFAVILVLQLGLTPIMAQQEQQIGIAGKEVILSCKAINNQKDGTCTWKYK 322
Query: 61 YKEVSSTIISFSKAQVFKGKAPMTHRSELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSI 120
YKEVSSTIISFSKAQVFKGKAPMTHRSELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSI
Sbjct: 323 YKEVSSTIISFSKAQVFKGKAPMTHRSELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSI 502
Query: 121 SLHVFKLTISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQK 180
SLHVFKLTISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQK
Sbjct: 503 SLHVFKLTISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQK 682
Query: 181 YILKLKQLKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSW 240
YILKLKQLKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSW
Sbjct: 683 YILKLKQLKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSW 862
Query: 241 RLNFRKIKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTD 300
RLNFRKIKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTD
Sbjct: 863 RLNFRKIKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTD 1042
Query: 301 GTMDVKIPKVQLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQV 360
GTMDVKIPKVQLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQV
Sbjct: 1043GTMDVKIPKVQLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQV 1222
Query: 361 SGPLPSNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTV 420
SGPLPSNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTV
Sbjct: 1223SGPLPSNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTV 1402
Query: 421 EEAHVWNSYAVIGIIIGASVLVIGLACMCIITGXXXXXXXXXXXXXXXXXXYLLEKKTCQ 480
EEAHVWNSYAVIGIIIGASVLVIGLACMCIITG YLLEKKTCQ
Sbjct: 1403EEAHVWNSYAVIGIIIGASVLVIGLACMCIITGMRWQRRRKRARRMAQAKQYLLEKKTCQ 1582
Query: 481 CQRRMYK 487
CQRRMYK
Sbjct: 1583CQRRMYK 1603
>gb|AF378701.1|AF378701 Anas platyrhynchos T-cell surface glycoprotein CD4 precursor, mRNA,
complete cds
Length = 1973
Score = 550 bits (1417), Expect = e-154
Identities = 288/488 (59%), Positives = 344/488 (70%), Gaps = 1/488 (0%)
Frame = +1
Query: 1 MERCGAVVSCVFAVILVLQLGLTPIMAQQEQQIGIAGKEVILSCKAINNQKDGTCTWKYK 60
ME CG S + AV ++LQLGLT IMA Q QQIG+ GKEVIL+CK + D TWKY+
Sbjct: 154 MELCGTAASSMRAVFVLLQLGLTHIMAHQ-QQIGVEGKEVILNCK----KHDKDVTWKYE 318
Query: 61 YKEVSSTII-SFSKAQVFKGKAPMTHRSELNSNSKKLKVSDLSLDDAGIYTCACYSPVVS 119
Y SS II ++FKG+APM+ RSE N NSK LKVS+L + DAG Y C C S S
Sbjct: 319 YDAGSSAIIIQILAGKIFKGRAPMSDRSETNQNSKHLKVSNLRISDAGTYICECGSDRNS 498
Query: 120 ISLHVFKLTISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQ 179
ISLHV KLTISSNG+FL +DLELT+M S SQP SI LFN +N VT E+LQ E PQ
Sbjct: 499 ISLHVVKLTISSNGYFLPGDDLELTVMHKSPKSQPRFSITLFNSHNSRVTPEVLQNETPQ 678
Query: 180 KYILKLKQLKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILS 239
KY LK+KQL+ DSGTW+C+++S+SPSIN+NISF+VKVLGFEK LE +Y V +T LS
Sbjct: 679 KYALKVKQLQPTDSGTWICNMHSDSPSINENISFNVKVLGFEKTHLERMYAAVDSTVTLS 858
Query: 240 WRLNFRKIKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKT 299
W LNFRKI WKE FTG+LNW+ +GN +ELL+F+ T EL +TKK + EI E K
Sbjct: 859 WHLNFRKIGWKEFFTGQLNWQ-EGNAITYELLDFNATADGELRETKKRSQALLEIPEMKR 1035
Query: 300 DGTMDVKIPKVQLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQ 359
D T++VKI K+QL HSG+Y CQL N R +S LVVMQV+A P GPL +G +MTLLCQ
Sbjct: 1036DSTVEVKIHKIQLKHSGEYTCQLLYNRRYIQSKTELVVMQVSANPPGPLPKGAEMTLLCQ 1215
Query: 360 VSGPLPSNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYT 419
VS P+P N HLLWERVNGT+M+ KKSKQ E KVEV V+A G+WNCHL+EDNN K+SLNYT
Sbjct: 1216VSSPIPPNVHLLWERVNGTKMDGKKSKQSETKVEVKVTAVGMWNCHLMEDNNMKLSLNYT 1395
Query: 420 VEEAHVWNSYAVIGIIIGASVLVIGLACMCIITGXXXXXXXXXXXXXXXXXXYLLEKKTC 479
VEEA W SY VIG+IIGA VL+ AC+ I+ G YLLEKKTC
Sbjct: 1396VEEAPTWMSYTVIGVIIGAGVLMFVFACLGIMAGMSWRRRRQRAKRMARARQYLLEKKTC 1575
Query: 480 QCQRRMYK 487
QCQ RM K
Sbjct: 1576QCQPRMNK 1599
>ref|NM_012705.1| Rattus norvegicus CD4 antigen (p55) (Cd4), mRNA
Length = 1749
Score = 114 bits (284), Expect = 3e-23
Identities = 117/481 (24%), Positives = 205/481 (42%), Gaps = 8/481 (1%)
Frame = +3
Query: 15 ILVLQLGLTPIMAQQEQQI-GIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSK 73
+L+LQL ++ Q + + G G L C++ +++ + WK ++ TI+ +
Sbjct: 90 LLLLQLSKLLVVTQGKTVVLGKEGGSAELPCES-TSRRSASFAWKSSDQK---TILGYKN 257
Query: 74 AQVFKGKAPMTHRSELNSN-----SKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLT 128
+ KG + R + N S L ++ L ++D+ Y C + + L VF++T
Sbjct: 258 KLLIKGSLELYSRFDSRKNAWERGSFPLIINKLRMEDSQTYVCELENKKEEVELWVFRVT 437
Query: 129 ISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQL 188
+ L + L L L N S P + K + N + +A + L+++
Sbjct: 438 FNPGTRLLQGQSLTLILDSNPKVSDPPIECKHKSSNI------VKDSKAFSTHSLRIQ-- 593
Query: 189 KAIDSGTWMCHVYSNSPSINQNISFDVK--VLGFEKERLEIIYTTVGNTAILSWRLNFRK 246
DSG W C V N + SFD+K VLGF + Y + G +A S+ LN +
Sbjct: 594 ---DSGIWNCTVTLNQ----KKHSFDMKLSVLGFASTSITA-YKSEGESAEFSFPLNLGE 749
Query: 247 IKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVK 306
E G+L W+ + + + FS+ +Q++ K +++ F++SE + ++
Sbjct: 750 ----ESLQGELRWKAEKAPSSQSWITFSLK-NQKVSVQKSTSNPKFQLSETLP---LTLQ 905
Query: 307 IPKVQLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPS 366
IP+V L +G L ++ LVVM+VT + TL C+V GP
Sbjct: 906 IPQVSLQFAGSGNLTLTLDRGILYQEVNLVVMKVTQPDSN--------TLTCEVMGPTSP 1061
Query: 367 NAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEAHVW 426
L+ ++ N E + S+Q E ++V G+W C L E K+ V +
Sbjct: 1062KMRLILKQEN---QEARVSRQ-EKVIQVQAPEAGVWQCLLSEGEEVKMDSKIQVLSKGL- 1226
Query: 427 NSYAVIGIIIGASVLVIGLACMCIITGXXXXXXXXXXXXXXXXXXYLLEKKTCQCQRRMY 486
N + +++G++ + +CI+ L EKKTCQC RM
Sbjct: 1227NQTMFLAVVLGSAFSFLVFTGLCILFCVRCRHQQRQAARMSQIKRLLSEKKTCQCSHRMQ 1406
Query: 487 K 487
K
Sbjct: 1407K 1409
>gb|M15768.1|RATCD4A Rat W3/25 antigen (homologue of human CD4) mRNA, complete cds
Length = 1749
Score = 114 bits (284), Expect = 3e-23
Identities = 117/481 (24%), Positives = 205/481 (42%), Gaps = 8/481 (1%)
Frame = +3
Query: 15 ILVLQLGLTPIMAQQEQQI-GIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSK 73
+L+LQL ++ Q + + G G L C++ +++ + WK ++ TI+ +
Sbjct: 90 LLLLQLSKLLVVTQGKTVVLGKEGGSAELPCES-TSRRSASFAWKSSDQK---TILGYKN 257
Query: 74 AQVFKGKAPMTHRSELNSN-----SKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLT 128
+ KG + R + N S L ++ L ++D+ Y C + + L VF++T
Sbjct: 258 KLLIKGSLELYSRFDSRKNAWERGSFPLIINKLRMEDSQTYVCELENKKEEVELWVFRVT 437
Query: 129 ISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQL 188
+ L + L L L N S P + K + N + +A + L+++
Sbjct: 438 FNPGTRLLQGQSLTLILDSNPKVSDPPIECKHKSSNI------VKDSKAFSTHSLRIQ-- 593
Query: 189 KAIDSGTWMCHVYSNSPSINQNISFDVK--VLGFEKERLEIIYTTVGNTAILSWRLNFRK 246
DSG W C V N + SFD+K VLGF + Y + G +A S+ LN +
Sbjct: 594 ---DSGIWNCTVTLNQ----KKHSFDMKLSVLGFASTSITA-YKSEGESAEFSFPLNLGE 749
Query: 247 IKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVK 306
E G+L W+ + + + FS+ +Q++ K +++ F++SE + ++
Sbjct: 750 ----ESLQGELRWKAEKAPSSQSWITFSLK-NQKVSVQKSTSNPKFQLSETLP---LTLQ 905
Query: 307 IPKVQLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPS 366
IP+V L +G L ++ LVVM+VT + TL C+V GP
Sbjct: 906 IPQVSLQFAGSGNLTLTLDRGILYQEVNLVVMKVTQPDSN--------TLTCEVMGPTSP 1061
Query: 367 NAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEAHVW 426
L+ ++ N E + S+Q E ++V G+W C L E K+ V +
Sbjct: 1062KMRLILKQEN---QEARVSRQ-EKVIQVQAPEAGVWQCLLSEGEEVKMDSKIQVLSKGL- 1226
Query: 427 NSYAVIGIIIGASVLVIGLACMCIITGXXXXXXXXXXXXXXXXXXYLLEKKTCQCQRRMY 486
N + +++G++ + +CI+ L EKKTCQC RM
Sbjct: 1227NQTMFLAVVLGSAFSFLVFTGLCILFCVRCRHQQRQAARMSQIKRLLSEKKTCQCSHRMQ 1406
Query: 487 K 487
K
Sbjct: 1407K 1409
>ref|NM_013488.1| Mus musculus CD4 antigen (Cd4), mRNA
Length = 3100
Score = 113 bits (282), Expect = 5e-23
Identities = 117/482 (24%), Positives = 199/482 (41%), Gaps = 9/482 (1%)
Frame = +2
Query: 15 ILVLQLGLTPIMAQQEQQIGIAGKE---VILSCKAINNQKDGTCTWKYKYKEVSSTIISF 71
+L+L L L+ ++A + + + GKE L C++ + +K TWK+ + +
Sbjct: 197 LLLLLLQLSQLLAVTQGKTLVLGKEGESAELPCES-SQKKITVFTWKFS--DQRKILGQH 367
Query: 72 SKAQVFKGKAPM------THRSELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVF 125
K + +G +P + + S L ++ L ++D+ Y C + + L VF
Sbjct: 368 GKGVLIRGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVF 547
Query: 126 KLTISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKL 185
K+T S L + L LTL NS S P K + +V+ +L +
Sbjct: 548 KVTFSPGTSLLQGQSLTLTLDSNSKVSNPLTECK--HKKGKVVS---------GSKVLSM 694
Query: 186 KQLKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFR 245
L+ DS W C V + + VLGF+ + Y + G +A S+ LNF
Sbjct: 695 SNLRVQDSDFWNCTVTLDQK--KNWFGMTLSVLGFQSTAI-TAYKSEGESAEFSFPLNFA 865
Query: 246 KIKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDV 305
+E G+L W+ + ++ ++FS+ ++E+ K + + ++ E + +
Sbjct: 866 ----EENGWGELMWKAEKDSFFQPWISFSI-KNKEVSVQKSTKDLKLQLKETL---PLTL 1021
Query: 306 KIPKVQLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLP 365
KIP+V L +G L ++ LVVM+V + TL C+V GP
Sbjct: 1022KIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMKVAQL---------NNTLTCEVMGPTS 1174
Query: 366 SNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEAHV 425
L ++ N E + S++ + V+V GLW C L E + K+ V V
Sbjct: 1175PKMRLTLKQEN---QEARVSEEQKV-VQVVAPETGLWQCLLSEGDKVKMDSRIQVLSRGV 1342
Query: 426 WNSYAVIGIIIGASVLVIGLACMCIITGXXXXXXXXXXXXXXXXXXYLLEKKTCQCQRRM 485
N + ++G S +G +CI+ L EKKTCQC RM
Sbjct: 1343-NQTVFLACVLGGSFGFLGFLGLCILCCVRCRHQQRQAARMSQIKRLLSEKKTCQCPHRM 1519
Query: 486 YK 487
K
Sbjct: 1520QK 1525
>emb|X04836.1|MMCD4R Mouse mRNA for T-cell surface glycoprotein CD4 (L3T4)
Length = 3100
Score = 113 bits (282), Expect = 5e-23
Identities = 117/482 (24%), Positives = 199/482 (41%), Gaps = 9/482 (1%)
Frame = +2
Query: 15 ILVLQLGLTPIMAQQEQQIGIAGKE---VILSCKAINNQKDGTCTWKYKYKEVSSTIISF 71
+L+L L L+ ++A + + + GKE L C++ + +K TWK+ + +
Sbjct: 197 LLLLLLQLSQLLAVTQGKTLVLGKEGESAELPCES-SQKKITVFTWKFS--DQRKILGQH 367
Query: 72 SKAQVFKGKAPM------THRSELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVF 125
K + +G +P + + S L ++ L ++D+ Y C + + L VF
Sbjct: 368 GKGVLIRGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVF 547
Query: 126 KLTISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKL 185
K+T S L + L LTL NS S P K + +V+ +L +
Sbjct: 548 KVTFSPGTSLLQGQSLTLTLDSNSKVSNPLTECK--HKKGKVVS---------GSKVLSM 694
Query: 186 KQLKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFR 245
L+ DS W C V + + VLGF+ + Y + G +A S+ LNF
Sbjct: 695 SNLRVQDSDFWNCTVTLDQK--KNWFGMTLSVLGFQSTAI-TAYKSEGESAEFSFPLNFA 865
Query: 246 KIKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDV 305
+E G+L W+ + ++ ++FS+ ++E+ K + + ++ E + +
Sbjct: 866 ----EENGWGELMWKAEKDSFFQPWISFSI-KNKEVSVQKSTKDLKLQLKETL---PLTL 1021
Query: 306 KIPKVQLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLP 365
KIP+V L +G L ++ LVVM+V + TL C+V GP
Sbjct: 1022KIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMKVAQL---------NNTLTCEVMGPTS 1174
Query: 366 SNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEAHV 425
L ++ N E + S++ + V+V GLW C L E + K+ V V
Sbjct: 1175PKMRLTLKQEN---QEARVSEEQKV-VQVVAPETGLWQCLLSEGDKVKMDSRIQVLSRGV 1342
Query: 426 WNSYAVIGIIIGASVLVIGLACMCIITGXXXXXXXXXXXXXXXXXXYLLEKKTCQCQRRM 485
N + ++G S +G +CI+ L EKKTCQC RM
Sbjct: 1343-NQTVFLACVLGGSFGFLGFLGLCILCCVRCRHQQRQAARMSQIKRLLSEKKTCQCPHRM 1519
Query: 486 YK 487
K
Sbjct: 1520QK 1525
>gb|M36850.1|MUSL3T4AA Mouse T-cell differentiation antigen CD4 (L3T4) mRNA, complete cds
Length = 1417
Score = 113 bits (282), Expect = 5e-23
Identities = 117/482 (24%), Positives = 199/482 (41%), Gaps = 9/482 (1%)
Frame = +1
Query: 15 ILVLQLGLTPIMAQQEQQIGIAGKE---VILSCKAINNQKDGTCTWKYKYKEVSSTIISF 71
+L+L L L+ ++A + + + GKE L C++ + +K TWK+ + +
Sbjct: 67 LLLLLLQLSQLLAVTQGKTLVLGKEGESAELPCES-SQKKITVFTWKFS--DQRKILGQH 237
Query: 72 SKAQVFKGKAPM------THRSELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVF 125
K + +G +P + + S L ++ L ++D+ Y C + + L VF
Sbjct: 238 GKGVLIRGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVF 417
Query: 126 KLTISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKL 185
K+T S L + L LTL NS S P K + +V+ +L +
Sbjct: 418 KVTFSPGTSLLQGQSLTLTLDSNSKVSNPLTECK--HKKGKVVS---------GSKVLSM 564
Query: 186 KQLKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFR 245
L+ DS W C V + + VLGF+ + Y + G +A S+ LNF
Sbjct: 565 SNLRVQDSDFWNCTVTLDQK--KNWFGMTLSVLGFQSTAI-TAYKSEGESAEFSFPLNFA 735
Query: 246 KIKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDV 305
+E G+L W+ + ++ ++FS+ ++E+ K + + ++ E + +
Sbjct: 736 ----EENGWGELMWKAEKDSFFQPWISFSI-KNKEVSVQKSTKDLKLQLKETL---PLTL 891
Query: 306 KIPKVQLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLP 365
KIP+V L +G L ++ LVVM+V + TL C+V GP
Sbjct: 892 KIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMKVAQL---------NNTLTCEVMGPTS 1044
Query: 366 SNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEAHV 425
L ++ N E + S++ + V+V GLW C L E + K+ V V
Sbjct: 1045PKMRLTLKQEN---QEARVSEEQKV-VQVVAPETGLWQCLLSEGDKVKMDSRIQVLSRGV 1212
Query: 426 WNSYAVIGIIIGASVLVIGLACMCIITGXXXXXXXXXXXXXXXXXXYLLEKKTCQCQRRM 485
N + ++G S +G +CI+ L EKKTCQC RM
Sbjct: 1213-NQTVFLACVLGGSFGFLGFLGLCILCCVRCRHQQRQAARMSQIKRLLSEKKTCQCPHRM 1389
Query: 486 YK 487
K
Sbjct: 1390QK 1395
>gb|M13816.1|MUSATCL3T Mouse T-cell surface antigen L3T4 mRNA, complete cds
Length = 1417
Score = 113 bits (282), Expect = 5e-23
Identities = 117/482 (24%), Positives = 199/482 (41%), Gaps = 9/482 (1%)
Frame = +1
Query: 15 ILVLQLGLTPIMAQQEQQIGIAGKE---VILSCKAINNQKDGTCTWKYKYKEVSSTIISF 71
+L+L L L+ ++A + + + GKE L C++ + +K TWK+ + +
Sbjct: 67 LLLLLLQLSQLLAVTQGKTLVLGKEGESAELPCES-SQKKITVFTWKFS--DQRKILGQH 237
Query: 72 SKAQVFKGKAPM------THRSELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVF 125
K + +G +P + + S L ++ L ++D+ Y C + + L VF
Sbjct: 238 GKGVLIRGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVF 417
Query: 126 KLTISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKL 185
K+T S L + L LTL NS S P K + +V+ +L +
Sbjct: 418 KVTFSPGTSLLQGQSLTLTLDSNSKVSNPLTECK--HKKGKVVS---------GSKVLSM 564
Query: 186 KQLKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFR 245
L+ DS W C V + + VLGF+ + Y + G +A S+ LNF
Sbjct: 565 SNLRVQDSDFWNCTVTLDQK--KNWFGMTLSVLGFQSTAI-TAYKSEGESAEFSFPLNFA 735
Query: 246 KIKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDV 305
+E G+L W+ + ++ ++FS+ ++E+ K + + ++ E + +
Sbjct: 736 ----EENGWGELMWKAEKDSFFQPWISFSI-KNKEVSVQKSTKDLKLQLKETL---PLTL 891
Query: 306 KIPKVQLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLP 365
KIP+V L +G L ++ LVVM+V + TL C+V GP
Sbjct: 892 KIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMKVAQL---------NNTLTCEVMGPTS 1044
Query: 366 SNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEAHV 425
L ++ N E + S++ + V+V GLW C L E + K+ V V
Sbjct: 1045PKMRLTLKQEN---QEARVSEEQKV-VQVVAPETGLWQCLLSEGDKVKMDSRIQVLSRGV 1212
Query: 426 WNSYAVIGIIIGASVLVIGLACMCIITGXXXXXXXXXXXXXXXXXXYLLEKKTCQCQRRM 485
N + ++G S +G +CI+ L EKKTCQC RM
Sbjct: 1213-NQTVFLACVLGGSFGFLGFLGLCILCCVRCRHQQRQAARMSQIKRLLSEKKTCQCPHRM 1389
Query: 486 YK 487
K
Sbjct: 1390QK 1395
>gb|AF045882.1|AF045882 Mus musculus T4 surface glycoprotein precursor, mRNA, partial cds
Length = 1299
Score = 110 bits (276), Expect = 2e-22
Identities = 111/461 (24%), Positives = 187/461 (40%), Gaps = 6/461 (1%)
Frame = +1
Query: 33 IGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPM------THR 86
+G G+ L C++ + +K TWK+ + + K + +G +P + +
Sbjct: 19 LGKEGESAELPCES-SQKKITVFTWKFS--DQRKILGQHGKGVLIRGGSPSQFDRFDSKK 189
Query: 87 SELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTLM 146
S L ++ L ++D+ Y C + + L VFK+T S L + L LTL
Sbjct: 190 GAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPGTSLLQGQSLTLTLD 369
Query: 147 QNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSPS 206
NS S P K + +V+ +L + L+ DS W C V +
Sbjct: 370 SNSKVSNPLTECK--HKKGKVVS---------GSKVLSMSNLRVQDSDFWNCTVTLDQK- 513
Query: 207 INQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKIKWKEGFTGKLNWEPQGNTA 266
+ VLGF+ + Y + G +A S+ LNF +E G+L W+ + ++
Sbjct: 514 -KNWFGMTLSVLGFQSTAI-TAYKSEGESAEFSFPLNFA----EENGWGELMWKAEKDSF 675
Query: 267 IHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKIPKVQLNHSGQYKCQLEING 326
++FS+ ++E+ K + + ++ E + +KIP+V L +G L ++
Sbjct: 676 FQPWISFSI-KNKEVSVQKSTKDLKLQLKETL---PLTLKIPQVSLQFAGSGNLTLTLDK 843
Query: 327 RRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPSNAHLLWERVNGTQMEMKKSK 386
LVVM+V + TL C+V GP L ++ N E + S+
Sbjct: 844 GTLHQEVNLVVMKVAQL---------NNTLTCEVMGPTSPKMRLTLKQEN---QEARVSE 987
Query: 387 QHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEAHVWNSYAVIGIIIGASVLVIGLA 446
+ + V+V GLW C L E + K+ V V N + ++G S +G
Sbjct: 988 EQKV-VQVVAPETGLWQCLLSEGDKVKMDSRIQVLSRGV-NQTVFLACVLGGSFAFLGFL 1161
Query: 447 CMCIITGXXXXXXXXXXXXXXXXXXYLLEKKTCQCQRRMYK 487
+CI+ L EKKTCQC RM K
Sbjct: 1162GLCILCCVRCRHQQRQAARMSQIKRLLSEKKTCQCPHRMQK 1284
>gb|M92840.1|RABCD4 Oryctolagus cuniculus cell surface glycoprotein CD4 mRNA, complete
cds
Length = 1498
Score = 109 bits (273), Expect = 5e-22
Identities = 122/486 (25%), Positives = 209/486 (42%), Gaps = 12/486 (2%)
Frame = +3
Query: 14 VILVLQLGLTPIMAQQEQQI-GIAGKEVILSCKAINNQKDGTCTWKYKYK-EVSSTIISF 71
++LVL L L P + + G AG V L C++ + +++ WK+ + ++ S
Sbjct: 93 LLLVLPLALLPAATWGKTVVRGKAGAIVELPCQS-SQKRNSVFNWKHANQVKILGNQGSS 269
Query: 72 SKAQVFKGKAPMTHRSELNSN-----SKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFK 126
S + KG +P+++R E N S L + DL +DD+G Y C + + L VF+
Sbjct: 270 SSSFWLKGNSPLSNRVESKKNMWDQGSFPLVIKDLRMDDSGTYICEVGDKKMEVELLVFR 449
Query: 127 LTISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLK 186
LT + N L + L LTL + S P S++ + N I+ E P +
Sbjct: 450 LTANPNTRLLHGQSLTLTL-EGPSVGSP--SVQWKSPENKII------ETGP---TCSMP 593
Query: 187 QLKAIDSGTWMCHVYSNSPSINQNISFDVK--VLGFEKERLEIIYTTVGNTAILSWRLNF 244
+L+ DSGTW CH+ S + D+K VLGF K +Y G S+ LNF
Sbjct: 594 KLRLQDSGTWSCHL---SFQDQNKLELDIKIIVLGFPKAS-ATVYKKEGEQVEFSFPLNF 761
Query: 245 RKIKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMD 304
E +G+L W+ G ++ ++FS+ +++ K + ++S+G +
Sbjct: 762 E----DESLSGELMWQVDGASSAQSWVSFSL-EDRKVSVQKILPDLKIQMSKGL---PLS 917
Query: 305 VKIPKVQLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPL 364
+ +P+ ++G L ++ + +LV+++VT + K L C+V GP+
Sbjct: 918 LTLPQALHRYAGSGNLSLTLDKGKLHQQVSLVMLKVTQV---------KNKLTCEVLGPI 1070
Query: 365 PSNAHLLWERVNGTQMEMKKSKQHEAK-VEVNVSAPGLWNCHLVEDNNKKISLNYTVEEA 423
L ++E +++K K V+V G W C L + + V
Sbjct: 1071DPKMKL------SLKLEDQEAKVSTQKMVQVLDPKAGTWQCLLSSGDQVLLESKADVLAT 1232
Query: 424 HVWNSYAVI--GIIIGASVLVIGLACMCIITGXXXXXXXXXXXXXXXXXXYLLEKKTCQC 481
+ + + G + G + LV+ A +CI L EKKTCQC
Sbjct: 1233GLSHQQPTLLAGALGGTAGLVL-FAGLCIYCCVKCRHRRHQAQRMSQIKKLLSEKKTCQC 1409
Query: 482 QRRMYK 487
R+ K
Sbjct: 1410PHRLQK 1427
>gb|AF071799.1|AF071799 Delphinapterus leucas T-cell surface glycoprotein CD4 precursor,
mRNA, complete cds
Length = 2662
Score = 99.4 bits (246), Expect = 7e-19
Identities = 126/488 (25%), Positives = 202/488 (40%), Gaps = 14/488 (2%)
Frame = +1
Query: 14 VILVLQLGLTPIMAQQEQQI-GIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFS 72
+ LVLQL + P Q ++ + G AG+ L CKA N K +WK Y+ + I+
Sbjct: 124 LFLVLQLVMLPAGTQGKKVVLGKAGELAELPCKASQN-KSLFFSWKNSYQ---TKILGRH 291
Query: 73 KAQVFKGKAPMTHRSELNSN-----SKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKL 127
KG + + R E N S L + DL + D+G Y C + + L VF+L
Sbjct: 292 GYFWHKGASNLHSRVESKINLWDQGSFPLVIKDLEVPDSGTYICEVEDKKIEVELQVFRL 471
Query: 128 TISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQ 187
T SS+ L + L LTL + S S P S++ N + + L L Q
Sbjct: 472 TASSDTRLLLGQSLTLTL-EGPSGSNP--SVQWKGPGN---------KRKNEAKSLSLPQ 615
Query: 188 LKAIDSGTWMCHVYSNSPSINQNISFD--VKVLGFEKERLEIIYTTVGNTAILSWRLNFR 245
+ DSGTW C V Q + F+ + VL F+ E +Y G S+ L F
Sbjct: 616 VGLQDSGTWTCTV----SQAQQTLVFNKHILVLAFQ-EVSSTVYAKEGEQMNFSFPLTF- 777
Query: 246 KIKWKEGFTGKLNW-EPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMD 304
E +G+L+W + +GN++ + F + + ++ K + +S+ +
Sbjct: 778 ---GDENLSGELSWLQAKGNSSPESWITFKL-NNGKVTVGKARKDLKLRMSKAL---PLH 936
Query: 305 VKIPKVQLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPL 364
+ +P+ ++G L + + LVVM+VT P +L C+V GP
Sbjct: 937 LTLPQALPQYAGSGNLTLNLTKGKLYQEVNLVVMRVTKSP---------NSLTCEVLGPT 1089
Query: 365 PSNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNK-----KISLNYT 419
L ++ N M+ S Q + + A G+W C L+ D K K+ +
Sbjct: 1090SPRLILSLKKEN---QSMRVSDQQKLVTVLGPEA-GMWQC-LLSDKGKVLLESKVKILPP 1254
Query: 420 VEEAHVWNSYAVIGIIIGASVLVIGLACMCIITGXXXXXXXXXXXXXXXXXXYLLEKKTC 479
V AH W ++ +++G ++ LA CI + L EKKTC
Sbjct: 1255V-LAHAWPK--LLAVVLGGITSLLLLAGFCIFS-AKCWHRRRRAERTSQIKRLLSEKKTC 1422
Query: 480 QCQRRMYK 487
C R+ K
Sbjct: 1423HCSHRLQK 1446
>gb|M35160.1|HUMATCT4A Human T4 surface glycoprotein CD4 gene, complete cds
Length = 1742
Score = 89.0 bits (219), Expect = 9e-16
Identities = 125/494 (25%), Positives = 195/494 (39%), Gaps = 20/494 (4%)
Frame = +1
Query: 14 VILVLQLGLTPIMAQQEQQI-GIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFS 72
++LVLQL L P Q ++ + G G V L+C A + +K WK S+ I
Sbjct: 103 LLLVLQLALLPAATQGKKVVLGKKGDTVELTCTA-SQKKSIQFHWKN-----SNQIKILG 264
Query: 73 KAQVFKGKAPM-------THRSELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVF 125
F K P + RS + + L + +L ++D+ Y C + L VF
Sbjct: 265 NQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVF 444
Query: 126 KLTISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKL 185
LT +S+ H L + L LTL ++ S P + + N L +
Sbjct: 445 GLTANSDTHLLQGQSLTLTL-ESPPGSSPSVQCRSPRGKN-----------IQGGKTLSV 588
Query: 186 KQLKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFR 245
QL+ DSGTW C V N + I D+ VL F+K I+Y G S+ L F
Sbjct: 589 SQLELQDSGTWTCTVLQNQKKVEFKI--DIVVLAFQKAS-SIVYKKEGEQVEFSFPLAFT 759
Query: 246 KIKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWF----EISEGKTDG 301
K +G+L W+ + ++ + F + K K+ + W ++ GK
Sbjct: 760 VEKLTG--SGELWWQAERASSSKSWITFDL-------KNKEVSVKWVTQDPKLQMGK-KL 909
Query: 302 TMDVKIPKV--QLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQ 359
+ + +P+ Q SG LE + LVVM+ T + + L C+
Sbjct: 910 PLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQL---------QKNLTCE 1062
Query: 360 VSGPLPSNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYT 419
V GP L + N E K SK+ +A +N A G+W C L ++ ++ L
Sbjct: 1063VWGPTSPKLMLSLKLEN---KEAKVSKREKAVWVLNPEA-GMWQCLL--SDSGQVLLESN 1224
Query: 420 VEEAHVWN------SYAVIGIIIGASVLVIGLACMCIITGXXXXXXXXXXXXXXXXXXYL 473
++ W+ + V+G + G +L IGL + L
Sbjct: 1225IKVLPTWSTPVQPMALIVLGGVAGL-LLFIGLGIFFCV---RCRHRRRQAERMSQIKRLL 1392
Query: 474 LEKKTCQCQRRMYK 487
EKKTCQC R K
Sbjct: 1393SEKKTCQCPHRFQK 1434
>gb|M31135.1|CHPCD4A Chimpanzee lymphocyte antigen CD4 mRNA, complete cds
Length = 1553
Score = 88.6 bits (218), Expect = 1e-15
Identities = 121/488 (24%), Positives = 197/488 (39%), Gaps = 14/488 (2%)
Frame = +2
Query: 14 VILVLQLGLTPIMAQQEQQI-GIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFS 72
++LVLQL L P Q ++ + G G V L+C A + +K WK + + I+
Sbjct: 185 LLLVLQLALLPAATQGKKVVLGKKGDTVELTCTA-SQKKSIQFHWKNSNQ---TKILGNQ 352
Query: 73 KAQVFKGKAPM-----THRSELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKL 127
+ + KG + + + RS + + L + +L ++D+ Y C + L VF L
Sbjct: 353 GSFLTKGPSKLNDRVDSRRSLWDQGNFTLIIKNLKIEDSDTYICEVGDQKEEVQLLVFGL 532
Query: 128 TISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQ 187
T +S+ H L + L LTL ++ S P + + N L + Q
Sbjct: 533 TANSDTHLLQGQSLTLTL-ESPPGSSPSVQCRSPRGKN-----------IQGGKTLSVSQ 676
Query: 188 LKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKI 247
L+ DSGTW C V N + I D+ VL F+K I+Y G S+ L F
Sbjct: 677 LELQDSGTWTCTVLQNQKKVEFKI--DIVVLAFQKAS-SIVYKKEGEQVEFSFPLAFTVE 847
Query: 248 KWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKI 307
K +G+L W+ + ++ + F + + K + ++ GK + + +
Sbjct: 848 KLTG--SGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDP---KLQMGK-KLPLHLTL 1009
Query: 308 PKV--QLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLP 365
P+ Q SG LE + LVVM+ T + + L C+V GP
Sbjct: 1010PQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQL---------QKNLTCEVWGPTS 1162
Query: 366 SNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEAHV 425
L + N E K SK+ +A +N A G+W C L ++ ++ L ++
Sbjct: 1163PKLMLSLKLEN---KEAKVSKREKAVWVLNPEA-GMWQCLL--SDSGQVLLESNIKVLPT 1324
Query: 426 WN------SYAVIGIIIGASVLVIGLACMCIITGXXXXXXXXXXXXXXXXXXYLLEKKTC 479
W+ + V+G + G +L IGL + L EKKTC
Sbjct: 1325WSTPVQPMALIVLGGVAGL-LLFIGLGIFFCV---RCRHRRRQAQRMSQIKRLLSEKKTC 1492
Query: 480 QCQRRMYK 487
QC R K
Sbjct: 1493QCPHRFQK 1516
>ref|XM_006966.2| Homo sapiens CD4 antigen (p55) (CD4), mRNA
Length = 1735
Score = 88.2 bits (217), Expect = 2e-15
Identities = 123/490 (25%), Positives = 193/490 (39%), Gaps = 16/490 (3%)
Frame = +2
Query: 14 VILVLQLGLTPIMAQQEQQI-GIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFS 72
++LVLQL L P Q ++ + G G V L+C A + +K WK S+ I
Sbjct: 95 LLLVLQLALLPAATQGKKVVLGKKGDTVELTCTA-SQKKSIQFHWKN-----SNQIKILG 256
Query: 73 KAQVFKGKAPM-------THRSELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVF 125
F K P + RS + + L + +L ++D+ Y C + L VF
Sbjct: 257 NQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVF 436
Query: 126 KLTISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKL 185
LT +S+ H L + L LTL ++ S P + + N L +
Sbjct: 437 GLTANSDTHLLQGQSLTLTL-ESPPGSSPSVQCRSPRGKN-----------IQGGKTLSV 580
Query: 186 KQLKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFR 245
QL+ DSGTW C V N + I D+ VL F+K I+Y G S+ L F
Sbjct: 581 SQLELQDSGTWTCTVLQNQKKVEFKI--DIVVLAFQKAS-SIVYKKEGEQVEFSFPLAFT 751
Query: 246 KIKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDV 305
K +G+L W+ + ++ + F + + K + ++ GK + +
Sbjct: 752 VEKLTG--SGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDP---KLQMGK-KLPLHL 913
Query: 306 KIPKV--QLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGP 363
+P+ Q SG LE + LVVM+ T + + L C+V GP
Sbjct: 914 TLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQL---------QKNLTCEVWGP 1066
Query: 364 LPSNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEA 423
L + N E K SK+ +A +N A G+W C L ++ ++ L ++
Sbjct: 1067TSPKLMLSLKLEN---KEAKVSKREKAVWVLNPEA-GMWQCLL--SDSGQVLLESNIKVL 1228
Query: 424 HVWN------SYAVIGIIIGASVLVIGLACMCIITGXXXXXXXXXXXXXXXXXXYLLEKK 477
W+ + V+G + G +L IGL + L EKK
Sbjct: 1229PTWSTPVQPMALIVLGGVAGL-LLFIGLGIFFCV---RCRHRRRQAERMSQIKRLLSEKK 1396
Query: 478 TCQCQRRMYK 487
TCQC R K
Sbjct: 1397TCQCPHRFQK 1426
>ref|NM_000616.1| Homo sapiens CD4 antigen (p55) (CD4), mRNA
Length = 1742
Score = 88.2 bits (217), Expect = 2e-15
Identities = 123/490 (25%), Positives = 193/490 (39%), Gaps = 16/490 (3%)
Frame = +1
Query: 14 VILVLQLGLTPIMAQQEQQI-GIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFS 72
++LVLQL L P Q ++ + G G V L+C A + +K WK S+ I
Sbjct: 103 LLLVLQLALLPAATQGKKVVLGKKGDTVELTCTA-SQKKSIQFHWKN-----SNQIKILG 264
Query: 73 KAQVFKGKAPM-------THRSELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVF 125
F K P + RS + + L + +L ++D+ Y C + L VF
Sbjct: 265 NQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVF 444
Query: 126 KLTISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKL 185
LT +S+ H L + L LTL ++ S P + + N L +
Sbjct: 445 GLTANSDTHLLQGQSLTLTL-ESPPGSSPSVQCRSPRGKN-----------IQGGKTLSV 588
Query: 186 KQLKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFR 245
QL+ DSGTW C V N + I D+ VL F+K I+Y G S+ L F
Sbjct: 589 SQLELQDSGTWTCTVLQNQKKVEFKI--DIVVLAFQKAS-SIVYKKEGEQVEFSFPLAFT 759
Query: 246 KIKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDV 305
K +G+L W+ + ++ + F + + K + ++ GK + +
Sbjct: 760 VEKLTG--SGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDP---KLQMGK-KLPLHL 921
Query: 306 KIPKV--QLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGP 363
+P+ Q SG LE + LVVM+ T + + L C+V GP
Sbjct: 922 TLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQL---------QKNLTCEVWGP 1074
Query: 364 LPSNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEA 423
L + N E K SK+ +A +N A G+W C L ++ ++ L ++
Sbjct: 1075TSPKLMLSLKLEN---KEAKVSKREKAVWVLNPEA-GMWQCLL--SDSGQVLLESNIKVL 1236
Query: 424 HVWN------SYAVIGIIIGASVLVIGLACMCIITGXXXXXXXXXXXXXXXXXXYLLEKK 477
W+ + V+G + G +L IGL + L EKK
Sbjct: 1237PTWSTPVQPMALIVLGGVAGL-LLFIGLGIFFCV---RCRHRRRQAERMSQIKRLLSEKK 1404
Query: 478 TCQCQRRMYK 487
TCQC R K
Sbjct: 1405TCQCPHRFQK 1434
>gb|M12807.1|HUMATCT4 Human T-cell surface glycoprotein T4 mRNA, complete cds
Length = 1742
Score = 88.2 bits (217), Expect = 2e-15
Identities = 123/490 (25%), Positives = 193/490 (39%), Gaps = 16/490 (3%)
Frame = +1
Query: 14 VILVLQLGLTPIMAQQEQQI-GIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFS 72
++LVLQL L P Q ++ + G G V L+C A + +K WK S+ I
Sbjct: 103 LLLVLQLALLPAATQGKKVVLGKKGDTVELTCTA-SQKKSIQFHWKN-----SNQIKILG 264
Query: 73 KAQVFKGKAPM-------THRSELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVF 125
F K P + RS + + L + +L ++D+ Y C + L VF
Sbjct: 265 NQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVF 444
Query: 126 KLTISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKL 185
LT +S+ H L + L LTL ++ S P + + N L +
Sbjct: 445 GLTANSDTHLLQGQSLTLTL-ESPPGSSPSVQCRSPRGKN-----------IQGGKTLSV 588
Query: 186 KQLKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFR 245
QL+ DSGTW C V N + I D+ VL F+K I+Y G S+ L F
Sbjct: 589 SQLELQDSGTWTCTVLQNQKKVEFKI--DIVVLAFQKAS-SIVYKKEGEQVEFSFPLAFT 759
Query: 246 KIKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDV 305
K +G+L W+ + ++ + F + + K + ++ GK + +
Sbjct: 760 VEKLTG--SGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDP---KLQMGK-KLPLHL 921
Query: 306 KIPKV--QLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGP 363
+P+ Q SG LE + LVVM+ T + + L C+V GP
Sbjct: 922 TLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQL---------QKNLTCEVWGP 1074
Query: 364 LPSNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEA 423
L + N E K SK+ +A +N A G+W C L ++ ++ L ++
Sbjct: 1075TSPKLMLSLKLEN---KEAKVSKREKAVWVLNPEA-GMWQCLL--SDSGQVLLESNIKVL 1236
Query: 424 HVWN------SYAVIGIIIGASVLVIGLACMCIITGXXXXXXXXXXXXXXXXXXYLLEKK 477
W+ + V+G + G +L IGL + L EKK
Sbjct: 1237PTWSTPVQPMALIVLGGVAGL-LLFIGLGIFFCV---RCRHRRRQAERMSQIKRLLSEKK 1404
Query: 478 TCQCQRRMYK 487
TCQC R K
Sbjct: 1405TCQCPHRFQK 1434
>gb|L06130.1|DOGCD4 Canis familiaris CD4 antigen mRNA, complete cds
Length = 1655
Score = 84.3 bits (207), Expect = 2e-14
Identities = 124/495 (25%), Positives = 201/495 (40%), Gaps = 21/495 (4%)
Frame = +3
Query: 14 VILVLQLGLTPIMAQ-QEQQIGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFS 72
++L+LQL + P + +E +G AG V L C+ +QK + +++ S I +
Sbjct: 186 LLLMLQLVMLPAVTPVREVVLGKAGDAVELPCQT--SQKKNI---HFNWRDSSMVQILGN 350
Query: 73 KAQVFK-GKAPMTHRSELNSN-----SKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFK 126
+ + G + + HR E N S L + DL + D+GIY C + L VF
Sbjct: 351 QGSFWTVGSSRLKHRVESKKNLWDQGSFPLVIKDLEVADSGIYFCDT-DKRQEVELLVFN 527
Query: 127 LTI---------SSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEA 177
LT SSN L + L LTL +N S S P S++ N +
Sbjct: 528 LTAKWDSGSSSGSSNIRLLQGQQLTLTL-ENPSGSSP--SVQWKGPGNK-------SKHG 677
Query: 178 PQKYILKLKQLKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAI 237
Q L +L+ D GTW C + + ++ NI+ V VL F+K Y G+
Sbjct: 678 GQNLSLSWPELQ--DGGTWTCIISQSQKTVEFNIN--VLVLAFQKVS-NTFYAREGDQVE 842
Query: 238 LSWRLNFRKIKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEG 297
S+ L+F E G+L W+ QG ++ ++F++ + + K H ++ +
Sbjct: 843 FSFPLSFED----ENLVGELRWQAQGASSSLLWISFTLENRK---LSMKEAHAPLKL-QM 998
Query: 298 KTDGTMDVKIPKVQLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLL 357
K + +P+V ++G L + LVVM+ + + L
Sbjct: 999 KESLPLRFTLPQVLSRYAGSGILTLNLAKGTLYQEVNLVVMRANS---------SQNNLT 1151
Query: 358 CQVSGPLPSNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLN 417
C+V GP L +N + K SKQ + V+ G W C L + + ++ +
Sbjct: 1152CEVLGPTSPELTL---SLNLKEQAAKVSKQQKLVWVVDPEG-GTWQCLLSDKDKVLLASS 1319
Query: 418 YTVEEAHVWNSYA-----VIGIIIGASVLVIGLACMCIITGXXXXXXXXXXXXXXXXXXY 472
V V S+ +G I+G +L+IGL C +
Sbjct: 1320LNVSSPVVIKSWPKFLAITLGGILGL-LLLIGLCVFCCVK---CWRRRRQAERMSQIKRL 1487
Query: 473 LLEKKTCQCQRRMYK 487
L EKKTCQC R+ K
Sbjct: 1488LSEKKTCQCSHRIQK 1532
>dbj|D63347.1|MACCD4 Rhesus monkey mRNA for CD4, complete cds
Length = 1377
Score = 82.0 bits (201), Expect = 1e-13
Identities = 117/489 (23%), Positives = 194/489 (38%), Gaps = 15/489 (3%)
Frame = +1
Query: 14 VILVLQLGLTPIMAQQEQQI-GIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFS 72
++LVLQL L P + Q ++ + G G V L+C A + +K+ WK + I+
Sbjct: 28 LLLVLQLALLPAVTQGKKVVLGKKGDTVELTCNA-SQKKNTQFHWKNSNQ---IKILGIQ 195
Query: 73 KAQVFKGKAPMTHRSELNSN-----SKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKL 127
+ + KG + ++ R++ + + + +L ++D+ Y C + + L VF L
Sbjct: 196 GSFLTKGPSKLSDRADSRKSLWDQGCFSMIIKNLKIEDSDTYICEVENKKEEVELLVFGL 375
Query: 128 TISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQ 187
T +S+ H L + L LTL ++ S P + + N L + Q
Sbjct: 376 TANSDTHLLEGQSLTLTL-ESPPGSSPSVKCRSPGGKN-----------IQGGRTLSVPQ 519
Query: 188 LKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKI 247
L+ DSGTW C V + ++ I D+ VL F+K +Y G S+ L F
Sbjct: 520 LERQDSGTWTCTVSQDQKTVEFKI--DIVVLAFQKAS-STVYKKEGEQVEFSFPLAFTLE 690
Query: 248 KWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKI 307
K +G+L W+ + ++ + F + + K + ++ GK + + +
Sbjct: 691 KLTG--SGELWWQAERASSPKSWITFDLKNKEVSVKRVTQDP---KLQMGK-KLPLHLTL 852
Query: 308 PKV--QLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLP 365
P+ Q SG LE + LVVM+ T + L C+V GP
Sbjct: 853 PQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQF---------QENLTCEVWGPTS 1005
Query: 366 SNAHLLWERVN-GTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEAH 424
L + N GT + SKQ +A +N A G+W C L + + N V
Sbjct: 1006PKLTLSLKLENKGTTV----SKQAKAVWVLNPEA-GMWQCLLSDSGQVLLESNIKVVPTW 1170
Query: 425 VWNSYAVIGIIIGASVLVIGLACMCIITGXXX------XXXXXXXXXXXXXXXYLLEKKT 478
+ I++G G+A + + TG L EKKT
Sbjct: 1171PTPVQPMALIVLG------GVAGLLLFTGLGIFFCVRCRHRRRQAERMSQIKRLLSEKKT 1332
Query: 479 CQCQRRMYK 487
CQC R K
Sbjct: 1333CQCPHRFQK 1359
>dbj|D86588.1|D86588 Squirrel monkey mRNA for CD4, complete cds
Length = 1374
Score = 82.0 bits (201), Expect = 1e-13
Identities = 113/485 (23%), Positives = 188/485 (38%), Gaps = 11/485 (2%)
Frame = +1
Query: 14 VILVLQLGLTPIMAQQEQQI-GIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFS 72
++LVLQL L P + + + G G+ V L C+ + +K+ WK + I+
Sbjct: 28 LLLVLQLALLPAVTHGKTVVLGKKGEVVELPCET-SLKKNVPFHWKTSDQ---IKILGVQ 195
Query: 73 KAQVFKGKAPMTHR-----SELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKL 127
V +G++ +T R S + S L + D ++D+ Y C S + L VF L
Sbjct: 196 NYFVTRGQSKLTDRIDSKKSSWDRGSFPLLIKDARIEDSETYICEVESKKEEVELQVFGL 375
Query: 128 TISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQ 187
T + + H L + L LTL ++ S P + T + + L + Q
Sbjct: 376 TANPDTHLLQGQSLTLTL-ESPPGSSP-----------SVECTSPRGKRIRGRKTLSVSQ 519
Query: 188 LKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKI 247
L DSGTW C V+ + + ++ VL F+ + +Y G S+ L F
Sbjct: 520 LGIPDSGTWKCTVFQHLELV---FEINIVVLAFQ-QASSTVYKKEGEQVEFSFPLAFA-- 681
Query: 248 KWKEGFT--GKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGK---TDGT 302
E T G+L W+ + ++ + F++T + K + ++ GK T
Sbjct: 682 --AETLTGSGELCWQAERASSSKSWITFNLTKQEVYVKLVTQDP---KLRMGKKLPLHLT 846
Query: 303 MDVKIPKVQLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSG 362
+ +P Q SG + L+ + LVVM+VT + + L C+V G
Sbjct: 847 LAQALP--QYAGSGNFTLALKGKTGKLHQEVNLVVMRVTQL---------QNNLTCEVWG 993
Query: 363 PLPSNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEE 422
P L + N E K SK+ +A +N PG W C L + + +
Sbjct: 994 PTSPKLMLSLKLEN---QEAKVSKREKAVWVLN-PEPGAWQCLLSDSGQVLLESKFEALP 1161
Query: 423 AHVWNSYAVIGIIIGASVLVIGLACMCIITGXXXXXXXXXXXXXXXXXXYLLEKKTCQCQ 482
++ I++G ++ + I L EKKTCQC
Sbjct: 1162TRSPPVQPMVLIVLGGVAGLLAFTGLGIFLCVRCRHRRRQAERMSQIKRLLSEKKTCQCP 1341
Query: 483 RRMYK 487
R K
Sbjct: 1342HRFQK 1356
>dbj|D63349.1|D63349 Macaca fascicularis mRNA for CD4 precursor, complete cds
Length = 1377
Score = 79.7 bits (195), Expect = 6e-13
Identities = 116/489 (23%), Positives = 193/489 (38%), Gaps = 15/489 (3%)
Frame = +1
Query: 14 VILVLQLGLTPIMAQQEQQI-GIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFS 72
++LVLQL L P + Q ++ + G G V L+C A + +K+ WK + I+
Sbjct: 28 LLLVLQLALLPAVTQGKKVVLGKKGDTVELTCNA-SQKKNTQFHWKNSNQ---IKILGIQ 195
Query: 73 KAQVFKGKAPMTHRSELNSN-----SKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKL 127
+ + KG + ++ R++ + + + +L ++D+ Y C + + L VF L
Sbjct: 196 GSFLTKGPSKLSDRADSRKSLWDQGCFSMIIKNLKIEDSDTYICEVENKKEEVELLVFGL 375
Query: 128 TISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQ 187
T +S+ H L + L LTL ++ S P + + N L + Q
Sbjct: 376 TANSDTHLLEGQSLTLTL-ESPPGSSPSVKCRSPGGKN-----------IQGGRTLSVPQ 519
Query: 188 LKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKI 247
L+ DSGTW C V + ++ I D+ VL F+K +Y G S+ F
Sbjct: 520 LERQDSGTWTCTVSQDQKTVEFKI--DIVVLAFQKAS-STVYKKEGEQVEFSFPPAFTLE 690
Query: 248 KWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKI 307
K +G+L W+ + ++ + F + + K + ++ GK + + +
Sbjct: 691 KLTG--SGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDP---KLQMGK-KLPLHLTL 852
Query: 308 PKV--QLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLP 365
P+ Q SG LE + LVVM+ T + L C+V GP
Sbjct: 853 PQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQF---------QENLTCEVWGPTS 1005
Query: 366 SNAHLLWERVN-GTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEAH 424
L + N GT + SKQ +A +N A G+W C L + + N V
Sbjct: 1006PKLTLSLKLENKGTTV----SKQAKAVWVLNPEA-GMWQCLLSDSGQVLLESNIKVVPTW 1170
Query: 425 VWNSYAVIGIIIGASVLVIGLACMCIITGXXX------XXXXXXXXXXXXXXXYLLEKKT 478
+ I++G G+A + + TG L EKKT
Sbjct: 1171PTPVQPMALIVLG------GVAGLLLFTGLGIFFCVRCRHRRRQAERMSQIKRLLSEKKT 1332
Query: 479 CQCQRRMYK 487
CQC R K
Sbjct: 1333CQCPHRFQK 1359
>dbj|D86589.1|D86589 African green monkey mRNA for CD4, complete cds
Length = 1377
Score = 79.0 bits (193), Expect = 1e-12
Identities = 117/490 (23%), Positives = 188/490 (37%), Gaps = 16/490 (3%)
Frame = +1
Query: 14 VILVLQLGLTPIMAQQEQQI-GIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFS 72
++LVLQL L P + Q ++ + G G V L+C A +QK T ++ +K S+ I
Sbjct: 28 LLLVLQLALLPAVTQGKKVVLGKKGDTVELTCNA--SQKTTT---QFHWKN-SNQIKILG 189
Query: 73 KAQVFKGKAPMTHRSELNSNSK-------KLKVSDLSLDDAGIYTCACYSPVVSISLHVF 125
K F K R ++S + + +L ++D+ Y C + + L VF
Sbjct: 190 KQGSFLTKGSSKLRDRIDSRKSLWDQGCFSMIIKNLKIEDSETYICEVENKEEEVELLVF 369
Query: 126 KLTISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKL 185
LT +S+ H L + L LTL ++ S P + + N L +
Sbjct: 370 GLTANSDTHLLQGQSLTLTL-ESPPGSSPSVKCRSPRGKN-----------IQGGRTLSV 513
Query: 186 KQLKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFR 245
QL+ DSGTW C V + ++ I D+ VL F+K +Y G S+ L F
Sbjct: 514 PQLERQDSGTWTCTVSQDQNTVEFKI--DIMVLAFQKAS-STVYKKEGEQVEFSFPLAFT 684
Query: 246 KIKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDV 305
K +G+L W+ + ++ + F + + K + ++ GK +++
Sbjct: 685 LEKLTG--SGELWWQAERASSSKSWITFDLKNKEVSVKQVTQDP---KLQMGK-KLPLNL 846
Query: 306 KIPKV--QLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGP 363
+P+ Q SG LE + LVVM+ T + L C+V GP
Sbjct: 847 TLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQF---------QENLTCEVWGP 999
Query: 364 LPSNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEA 423
L + N K++K V V G+W C L + + N V
Sbjct: 1000TSPKLMLSLKLENKAATVSKQAK----AVWVLNPEEGMWQCLLSDSGQVLLESNIKVLPT 1167
Query: 424 HVWNSYAVIGIIIGASVLVIGLACMCIITGXXX------XXXXXXXXXXXXXXXYLLEKK 477
+ I++G G+A + + TG L EKK
Sbjct: 1168WPTPVQPMALIVLG------GVAGLLLFTGLGIFFCVRCRHRRRQAQRMSQIKRLLSEKK 1329
Query: 478 TCQCQRRMYK 487
TCQC R K
Sbjct: 1330TCQCPHRFQK 1359
>dbj|D63346.1|D63346 Macaca nemestrina mRNA for precursor CD4, complete cds
Length = 1377
Score = 79.0 bits (193), Expect = 1e-12
Identities = 114/484 (23%), Positives = 195/484 (39%), Gaps = 16/484 (3%)
Frame = +1
Query: 14 VILVLQLGLTPIMAQQEQQI-GIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFS 72
++LVLQL L P + Q ++ + G G V L+C A + +K+ WK I+
Sbjct: 28 LLLVLQLALLPAVTQGKKVVLGKKGDTVELTCNA-SQKKNTQFHWK---NSDQIKILGIQ 195
Query: 73 KAQVFKGKAPMTHRSELNSN-----SKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKL 127
+ + KG + ++ R++ + + + +L ++D+ Y C + + L VF L
Sbjct: 196 GSFLTKGPSKLSDRADSRKSLWDQGCFSMIIKNLKIEDSNTYICEVENEKEEVELLVFGL 375
Query: 128 TISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQ 187
T +S+ H L + L LTL ++ S P + + N L + Q
Sbjct: 376 TANSDTHLLEGQSLTLTL-ESPPGSSPSVKCRSPGGKN-----------IQGGRTLSVPQ 519
Query: 188 LKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKI 247
L+ DSGTW C V + ++ I D+ VL F+K +Y G S+ L F
Sbjct: 520 LERQDSGTWTCTVSQDQKTVEFKI--DIVVLAFQKAS-STVYKKEGEQVEFSFPLAFTLE 690
Query: 248 KWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKI 307
K +G+L W+ + ++ + F + + K + ++ GK + + +
Sbjct: 691 KLTG--SGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDP---KLQMGK-KLPLHLTL 852
Query: 308 PKVQLNHSGQYKCQLEIN---GRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPL 364
P+ ++G L ++ G+ + V LVVM+ T + L C+V GP
Sbjct: 853 PQALPQYAGSGNLTLALDAKTGKLHQEVN-LVVMRATQF---------QENLTCEVWGPT 1002
Query: 365 PSNAHLLWERVN-GTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEA 423
L + N GT + SKQ +A +N A G+W C L + + N V
Sbjct: 1003SPKLTLSLKLENKGTTV----SKQAKAVWVLNPEA-GMWQCLLSDSGQVLLESNIKVVPT 1167
Query: 424 HVWNSYAVIGIIIGASVLVIGLACMCIITGXXX------XXXXXXXXXXXXXXXYLLEKK 477
+ I++G G+A + + TG L EKK
Sbjct: 1168WPTPVQPMALIVLG------GVAGLLLFTGLGIFFCVRCRHRRRQAERMSQIKRLLSEKK 1329
Query: 478 TCQC 481
TCQC
Sbjct: 1330TCQC 1341
>gb|M31134.1|MACCD4A Rhesus monkey lymphocyte antigen CD4 mRNA, complete cds
Length = 1760
Score = 78.6 bits (192), Expect = 1e-12
Identities = 114/488 (23%), Positives = 190/488 (38%), Gaps = 14/488 (2%)
Frame = +2
Query: 14 VILVLQLGLTPIMAQQEQQI-GIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFS 72
++LVLQL L P + Q ++ + G G V L+C A + +K+ WK + I+
Sbjct: 242 LLLVLQLALLPAVTQGKKVVLGKKGDTVELTCTA-SQKKNTQFHWKNSNQ---IKILGIQ 409
Query: 73 KAQVFKGKAPMTHRSELNSN-----SKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKL 127
+ KG + ++ R++ + + + +L ++D+ Y C + + L VF L
Sbjct: 410 GLFLTKGPSKLSDRADSRKSLWDQGCFSMIIKNLKIEDSDTYICEVENKKEEVELLVFGL 589
Query: 128 TISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQ 187
T +S+ H L + L LTL ++ S P + + N + + Q
Sbjct: 590 TANSDTHLLEGQSLTLTL-ESPPGSSPSVKCRSPGGKN-----------IQGGRTISVPQ 733
Query: 188 LKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKI 247
L+ DSGTW C V + ++ I D+ VL F+K +Y G S+ L F
Sbjct: 734 LERQDSGTWTCTVSQDQKTVEFKI--DIVVLAFQKAS-STVYKKEGEQVEFSFPLAFTLE 904
Query: 248 KWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKI 307
K +G+L W+ + ++ + F + + K + ++ GK + + +
Sbjct: 905 KLTG--SGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDP---KLQMGK-KLPLHLTL 1066
Query: 308 PKV--QLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLP 365
P+ Q SG LE + LVVM+ T + L C+V GP
Sbjct: 1067PQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQF---------QENLTCEVWGPTS 1219
Query: 366 SNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEAHV 425
L + N SKQ +A +N A G+W C L + + N V
Sbjct: 1220PKLTLSLKLEN---KGATVSKQAKAVWVLNPEA-GMWQCLLSDSGQVLLESNIKVVPTWP 1387
Query: 426 WNSYAVIGIIIGASVLVIGLACMCIITGXXX------XXXXXXXXXXXXXXXYLLEKKTC 479
+ I++G G+A + + TG L EKKTC
Sbjct: 1388TPVQPMALIVLG------GVAGLLLFTGLGIFFCVRCRHRRRQAERMSQIKRLLSEKKTC 1549
Query: 480 QCQRRMYK 487
QC R K
Sbjct: 1550QCPHRFQK 1573
>dbj|D63348.1|D63348 Macaca fuscata mRNA for precursor CD4, complete cds
Length = 1377
Score = 77.8 bits (190), Expect = 2e-12
Identities = 113/488 (23%), Positives = 190/488 (38%), Gaps = 14/488 (2%)
Frame = +1
Query: 14 VILVLQLGLTPIMAQQEQQI-GIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFS 72
++LVLQL L P + Q ++ + G G V L+C A + +K+ WK + I+
Sbjct: 28 LLLVLQLALLPAVTQGKKVVLGKKGDTVELTCNA-SQKKNTQFHWKNSNQ---IKILGIQ 195
Query: 73 KAQVFKGKAPMTHRSELNSN-----SKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKL 127
+ + KG + ++ R++ + + + +L ++D+ Y C + + L VF L
Sbjct: 196 GSFLTKGPSKLSDRADSRKSLWDQGCFSMIIKNLKIEDSDTYICEVENKKEEVELLVFGL 375
Query: 128 TISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQ 187
T +S+ H L + L LTL ++ S P + + N + + Q
Sbjct: 376 TANSDTHLLEGQSLTLTL-ESPPGSSPSVKCRSPGGKN-----------IQGGRTISVPQ 519
Query: 188 LKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKI 247
L+ DSGTW C V + ++ I D+ VL F+K +Y G S+ L F
Sbjct: 520 LERQDSGTWTCTVSQDQKTVEFKI--DIVVLAFQKAS-STVYKKEGEQVEFSFPLAFTLE 690
Query: 248 KWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKI 307
K +G+L W+ + ++ + F + + K + ++ GK + + +
Sbjct: 691 KLTG--SGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDP---KLQMGK-KLPLHLTL 852
Query: 308 PKV--QLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLP 365
P+ Q SG LE + LVVM+ + L C+V GP
Sbjct: 853 PQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRAAQF---------QENLTCEVWGPTS 1005
Query: 366 SNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEAHV 425
L + N SKQ +A +N A G+W C L + + N V
Sbjct: 1006PKLTLSLKLEN---KGATVSKQAKAVWVLNPEA-GMWQCLLSDSGQVLLESNIKVVPTWP 1173
Query: 426 WNSYAVIGIIIGASVLVIGLACMCIITGXXX------XXXXXXXXXXXXXXXYLLEKKTC 479
+ I++G G+A + + TG L EKKTC
Sbjct: 1174TPVQPMALIVLG------GVAGLLLFTGLGIFFCVRCRHRRRQAERMSQIKRLLSEKKTC 1335
Query: 480 QCQRRMYK 487
QC R K
Sbjct: 1336QCPHRFQK 1359
>dbj|AB000483.1|AB000483 Felis catus mRNA for CD4 antigen, complete cds
Length = 3074
Score = 76.6 bits (187), Expect = 5e-12
Identities = 127/503 (25%), Positives = 198/503 (39%), Gaps = 29/503 (5%)
Frame = +2
Query: 14 VILVLQLGLTPIMAQQEQQI--GIAGKEVILSCKAINNQKDGTCTWKY--KYKEVSSTII 69
++LVLQL + Q +++ G AG L C+A + +K T TW+ + K + S
Sbjct: 158 LLLVLQLVMLKAAVPQGKEVVLGKAGGTAELPCQA-SQKKYMTFTWRLSSQVKILESQHS 334
Query: 70 SFSKAQVFKGKAPMTHRSEL-NSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLT 128
S K K + L + S L + L + D+GIYTC + + L VF LT
Sbjct: 335 SLCLTGSSKLKTRFESKKILWDQGSFPLVIKSLQVADSGIYTCEVENKKREVELLVFGLT 514
Query: 129 -----------------ISSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTE 171
S++ + L + L LTL ++ S S P S++ N
Sbjct: 515 AKVDPSGSGGSSSSSTSTSTSIYLLQGQSLTLTL-ESPSSSNP--SVQWKGPGN------ 667
Query: 172 ILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTT 231
+ + L L QL+ +SGT C V + ++ N ++ VL F K +Y
Sbjct: 668 ---KSKSGVHSLSLSQLELQESGTCTCTVSQSQKTLVFNT--NILVLAFRKVS-NTVYAK 829
Query: 232 VGNTAILSWRLNFRKIKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIW 291
G S+ LNF E G L W+ +G A LL S T + K+ +
Sbjct: 830 EGEQVEFSFPLNFE----DENLMGNLRWKAEG--APSSLLWISFTLKNKQLSVKEVDP-- 985
Query: 292 FEISEGKTDGTMDVKIPKVQLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRG 351
+ + + +P V ++G L ++ + + LVVM+VT G
Sbjct: 986 YSKLQMMDSLPLRFTLPNVLSRYAGSGNLTLVLDKGQLQQEVKLVVMRVT-------QSG 1144
Query: 352 GKMTLLCQVSGPLPSNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNN 411
+T C+V GP S L ++ G ++ K ++ V V + G W C L +
Sbjct: 1145NNLT--CEVLGP-TSPELTLSLKLKGQAAKVSKQQK---MVRVEDAEAGTWQCLL--SHK 1300
Query: 412 KKISLNYTVEE-----AHVWNSY--AVIGIIIGASVLVIGLACMCIITGXXXXXXXXXXX 464
K+ L E W + V+G ++G VL IGL C +
Sbjct: 1301DKVLLASKAEVLPPVLTRTWTNLLTIVLGGVLGL-VLYIGLWVYCCV---KCWHRRRQAA 1468
Query: 465 XXXXXXXYLLEKKTCQCQRRMYK 487
L EKKTCQC R+ K
Sbjct: 1469RMSHIKRLLSEKKTCQCSHRLQK 1537
>emb|X68565.1|CFCD4 C.familiaris mRNA for T-cell surface glycoprotein CD4
Length = 1297
Score = 74.3 bits (181), Expect = 2e-11
Identities = 114/457 (24%), Positives = 188/457 (40%), Gaps = 21/457 (4%)
Frame = +2
Query: 16 LVLQLGLTPIMAQ-QEQQIGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKA 74
L+LQL + P + +E +G AG V L C+ +QK + +++ S I ++
Sbjct: 2 LMLQLVMLPAVTPVREVVLGKAGDAVELPCQT--SQKKNI---HFNWRDSSMVQILGNQG 166
Query: 75 QVFK-GKAPMTHRSELNSN-----SKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLT 128
+ G + + HR E N S L + DL + D+GIY C + L VF LT
Sbjct: 167 SFWTVGSSRLKHRVESKKNLWDQGSFPLVIKDLEVADSGIYFCDT-DKRQEVELLVFNLT 343
Query: 129 I---------SSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQ 179
SSN L + L LTL +N S S P S++ N + Q
Sbjct: 344 AKWDSGSSSGSSNIRLLQGQQLTLTL-ENPSGSSP--SVQWKGPGNK-------SKHGGQ 493
Query: 180 KYILKLKQLKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILS 239
L +L+ D GTW C + + ++ NI +V VL F+K Y G+ S
Sbjct: 494 NLSLSWPELQ--DGGTWTCIISQSQKTVEFNI--NVLVLAFQKVS-NTFYAREGDQVEFS 658
Query: 240 WRLNFRKIKWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKT 299
+ L+F E G+L W+ QG ++ ++F++ + + K H ++ + K
Sbjct: 659 FPLSFE----DENLVGELRWQAQGASSSLLWISFTLENRK---LSMKEAHAPLKL-QMKE 814
Query: 300 DGTMDVKIPKVQLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQ 359
+ +P+V ++G L + LVVM+ + + L C+
Sbjct: 815 SLPLRFTLPQVLSRYAGSGILTLNLAKGTLYQEVNLVVMR---------ANSSQNNLTCE 967
Query: 360 VSGPLPSNAHLLWERVNGTQMEMKKSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYT 419
V GP L +N + K SKQ + V+ G W C L + + ++ +
Sbjct: 968 VLGPTSPELTL---SLNLKEQAAKVSKQQKLVWVVDPEG-GTWQCLLSDKDKVLLASSLN 1135
Query: 420 VEEAHVWNSY-----AVIGIIIGASVLVIGLACMCII 451
V V S+ +G I+G +L+IGL C +
Sbjct: 1136VSSPVVIKSWPKFLAITLGGILGL-LLLIGLCVFCCV 1243
>emb|X73323.1|PTCD4 P.troglodytes CD4 mRNA
Length = 1192
Score = 71.2 bits (173), Expect = 2e-10
Identities = 103/426 (24%), Positives = 174/426 (40%), Gaps = 13/426 (3%)
Frame = +1
Query: 33 IGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPM-----THRS 87
+G G V L+C A + +K WK + + I+ + + KG + + + RS
Sbjct: 7 LGKKGDTVELTCTA-SQKKSIQFHWKNSNQ---TKILGNQGSFLTKGPSKLNDRVDSRRS 174
Query: 88 ELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTLMQ 147
+ + L + +L ++D+ Y C + L VF LT +S+ H L + L LTL +
Sbjct: 175 LWDQGNFTLIIKNLKIEDSDTYICEVGDQKEEVQLLVFGLTANSDTHLLQGQSLTLTL-E 351
Query: 148 NSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSPSI 207
+ S P + + N L + QL+ DSGTW C V N +
Sbjct: 352 SPPGSSPSVQCRSPRGKN-----------IQGGKTLSVSQLELQDSGTWTCTVLQNQKKV 498
Query: 208 NQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKIKWKEGFTGKLNWEPQGNTAI 267
I D+ VL F+K I+Y G S+ L F K +G+L W+ + ++
Sbjct: 499 EFKI--DIVVLAFQKAS-SIVYKKEGEQVEFSFPLAFTVEKLTG--SGELWWQAERASSS 663
Query: 268 HELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKIPKV--QLNHSGQYKCQLEIN 325
+ F + + K + ++ GK + + +P+ Q SG LE
Sbjct: 664 KSWITFDLKNKEVSVKRVTQDP---KLQMGK-KLPLHLTLPQALPQYAGSGDLTLALEAK 831
Query: 326 GRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPSNAHLLWERVNGTQMEMKKS 385
+ LVVM+ T + + L C+V GP L + N E K S
Sbjct: 832 TGKLHQEVNLVVMRATQL---------QKNLTCEVWGPTSPKLMLSLKLEN---KEAKVS 975
Query: 386 KQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEAHVWN------SYAVIGIIIGAS 439
K+ +A +N A G+W C L ++ ++ L ++ W+ + V+G + G
Sbjct: 976 KREKAVWVLNPEA-GMWQCLL--SDSGQVLLESNIKVLPTWSTPVQPMALIVLGGVAGL- 1143
Query: 440 VLVIGL 445
+L IGL
Sbjct: 1144LLFIGL 1161
>gb|AF001221.1|AF001221 Cercopithecus tantalus CD4 (CD4) mRNA, partial cds
Length = 1192
Score = 65.1 bits (157), Expect = 1e-08
Identities = 93/397 (23%), Positives = 150/397 (37%), Gaps = 9/397 (2%)
Frame = +1
Query: 33 IGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPMTHRSELNSN 92
+G G V L+C A N T ++ +K S+ I K F K R ++S
Sbjct: 7 LGKKGDTVELTCNASQNT-----TTQFHWKN-SNQIKILGKQGSFLTKGSSKLRDRIDSR 168
Query: 93 SK-------KLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTL 145
+ + +L ++D+ Y C + + L VF LT +S+ H L + L LTL
Sbjct: 169 KSLWDQGCFSMIIKNLKIEDSETYICEVENKKEEVELLVFGLTANSDTHLLQGQSLTLTL 348
Query: 146 MQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSP 205
++ S P + + N L + QL+ DSGTW C V +
Sbjct: 349 -ESPPGSSPSVKCRSPRGKN-----------IQGGRTLSVPQLERQDSGTWTCTVSQDQN 492
Query: 206 SINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKIKWKEGFTGKLNWEPQGNT 265
++ I D+ VL F+K +Y G S+ L F K +G+L W+ + +
Sbjct: 493 TVEFKI--DIVVLAFQKAS-STVYKKEGEQVEFSFPLAFTLEKLTG--SGELRWQAERAS 657
Query: 266 AIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKIPKV--QLNHSGQYKCQLE 323
+ + F + + K + E+ GK + + +P+ Q SG LE
Sbjct: 658 SSKSWITFDLKNKEVSVKQVTQDP---ELQMGK-KLPLHLTLPQALPQYAGSGNLTLALE 825
Query: 324 INGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPSNAHLLWERVNGTQMEMK 383
+ LVVM+ T + L C+V GP L + N K
Sbjct: 826 AKTGKLHQEVNLVVMRATQF---------QENLTCEVWGPTSPKLMLSLKLENKAATVSK 978
Query: 384 KSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTV 420
++K V V G+W C L + + N V
Sbjct: 979 QAK----AVWVLNPEEGMWQCLLSDSGQVLLESNIKV 1077
>emb|X73327.1|CACD41 C.atys CD4 mRNA 1
Length = 1192
Score = 65.1 bits (157), Expect = 1e-08
Identities = 100/431 (23%), Positives = 174/431 (40%), Gaps = 10/431 (2%)
Frame = +1
Query: 33 IGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPMTHRSELNSN 92
+G G V L+C A + +K WK K++ I+ + + KG + ++ R++ +
Sbjct: 7 LGKKGDTVELACNA-SQKKSTQFHWKNS-KQIK--ILGNQGSFLTKGSSKLSDRADSRKS 174
Query: 93 -----SKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTLMQ 147
+ + +L ++D+ Y C + + L VF LT +S+ H L + L LTL +
Sbjct: 175 LWDQGCFSMIIKNLKIEDSETYICEVENKKEEVELLVFGLTANSDTHLLEGQSLTLTL-E 351
Query: 148 NSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSPSI 207
+ S P + + N L + QL+ DSGTW C V + ++
Sbjct: 352 SPPGSSPSVKCRSPRGKN-----------IQGGRTLSVPQLERQDSGTWTCTVSQDQKTV 498
Query: 208 NQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKIKWKEGFTGKLNWEPQGNTAI 267
I D+ VL F+K +Y G S+ L F ++ G +G+L W+ + ++
Sbjct: 499 EFKI--DIVVLAFQKAS-STVYKKEGEQVEFSFPLAF-TLEELTG-SGELWWQAERASSS 663
Query: 268 HELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKIPKV--QLNHSGQYKCQLEIN 325
+ F + + K + ++ GK + + +P+ Q SG LE
Sbjct: 664 KSWITFDLKNKEVSVKRVTQDP---KLQMGK-KLPLHLTLPQALPQYAGSGNLTLALEAK 831
Query: 326 GRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPSNAHLLWERVNGTQMEMKK- 384
+ LVVM+ T + L C+V GP L ++E KK
Sbjct: 832 TEKLHQEVNLVVMRATQF---------QENLTCEVWGPTSPKLTL------SLRLENKKA 966
Query: 385 --SKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEAHVWNSYAVIGIIIGASVLV 442
SKQ +A +N A G+W C L + + N V + I++G
Sbjct: 967 TVSKQAKAVWVLNPEA-GMWQCLLSDSGQALLESNIKVVPTWPTPVQPMALIVLG----- 1128
Query: 443 IGLACMCIITG 453
G+A + + TG
Sbjct: 1129-GVAGLLLFTG 1158
>emb|X73328.1|CACD42 C.atys CD4 mRNA 2
Length = 1189
Score = 64.7 bits (156), Expect = 2e-08
Identities = 100/431 (23%), Positives = 172/431 (39%), Gaps = 10/431 (2%)
Frame = +1
Query: 33 IGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPMTHRSELNSN 92
+G G V L+C A +QK WK K++ I+ + + KG + ++ R++ +
Sbjct: 7 LGKKGDTVELACNA--SQKSTQFHWKNS-KQIK--ILGNQGSFLIKGSSKLSDRADSRKS 171
Query: 93 -----SKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTLMQ 147
+ + +L ++D+ Y C + L V LT +S+ H L + L LTL +
Sbjct: 172 LWDQGCFSMIIKNLKIEDSETYICEVEDKKEEVELLVLGLTANSDTHLLEGQSLTLTL-E 348
Query: 148 NSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSPSI 207
+ S P + + N L + QL+ DSGTW C V + ++
Sbjct: 349 SPPGSSPSVKCRSPRGKN-----------IQGGRTLSVPQLERQDSGTWTCTVSQDQKTV 495
Query: 208 NQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKIKWKEGFTGKLNWEPQGNTAI 267
I D+ VL F+K +Y G S+ L F ++ G +G+L W+ + ++
Sbjct: 496 EFKI--DIMVLAFQKAS-STVYKKEGEQVEFSFPLAF-TLEELTG-SGELWWQAERASSS 660
Query: 268 HELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKIPKV--QLNHSGQYKCQLEIN 325
+ F + + K + ++ GK + + +P+ Q SG LE
Sbjct: 661 KSWITFDLKNKEVSVKRVTQDP---KLQMGK-KLPLHLTLPQALPQYAGSGNLTLALEAK 828
Query: 326 GRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPSNAHLLWERVNGTQMEMKK- 384
+ LVVM+ T + L C+V GP L ++E KK
Sbjct: 829 TEKLHQEVNLVVMRATQF---------QENLTCEVWGPTSPKLTL------SLKLENKKA 963
Query: 385 --SKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEAHVWNSYAVIGIIIGASVLV 442
SKQ +A +N A G+W C L + + N V + I++G
Sbjct: 964 TVSKQAKAVWVLNPEA-GMWQCLLSDSGQALLESNIKVVPTWPTPVQPMALIVLG----- 1125
Query: 443 IGLACMCIITG 453
G+A + + TG
Sbjct: 1126-GVAGLLLFTG 1155
>gb|AF001222.1|AF001222 Cercopithecus tantalus CD4 (CD4) mRNA, partial cds
Length = 1192
Score = 64.3 bits (155), Expect = 2e-08
Identities = 92/397 (23%), Positives = 152/397 (38%), Gaps = 9/397 (2%)
Frame = +1
Query: 33 IGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPMTHRSELNSN 92
+G G V L+C A N T ++ +K S+ I K F K R ++S
Sbjct: 7 LGKKGDTVELTCNASQNT-----TTQFHWKN-SNQIKILGKQGSFLTKGSSKLRDRIDSR 168
Query: 93 SK-------KLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTL 145
+ + +L ++D+ Y C + + L VF LT +S+ H L + L LTL
Sbjct: 169 KSLWDQGCFSMIIKNLKIEDSETYICEVENKKEEVELLVFGLTANSDTHLLQGQSLTLTL 348
Query: 146 MQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSP 205
++ S P + + N L + QL+ DSGTW C V +
Sbjct: 349 -ESPPGSSPSVKCRSPRGKN-----------IQGGRTLSVPQLERQDSGTWTCTVSQDQN 492
Query: 206 SINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKIKWKEGFTGKLNWEPQGNT 265
++ I D+ VL F+K +Y G S+ L F K +G+L W+ + +
Sbjct: 493 TVEFKI--DIVVLAFQKAS-STVYKKEGEQVEFSFPLAFTLEKLTG--SGELWWQAERAS 657
Query: 266 AIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKIPKV--QLNHSGQYKCQLE 323
+ + F + + K + ++ GK +++ +P+ Q SG + LE
Sbjct: 658 SSKSWITFDLKNKEVSVKQVTQDP---KLQMGK-KLPLNLTLPQALPQYAGSGNFTLALE 825
Query: 324 INGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPSNAHLLWERVNGTQMEMK 383
+ LVVM+ T + L C+V GP L + N K
Sbjct: 826 AKTGKLHQEVNLVVMRATQF---------QENLTCEVWGPTSPKLMLSLKLENKAATVSK 978
Query: 384 KSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTV 420
++K V V G+W C L + + N V
Sbjct: 979 QAK----AVWVLNPEEGMWQCLLSDSGQVLLESNIKV 1077
>gb|AF001223.1|AF001223 Cercopithecus sabaeus CD4 (CD4) mRNA, partial cds
Length = 1192
Score = 63.5 bits (153), Expect = 4e-08
Identities = 95/397 (23%), Positives = 157/397 (38%), Gaps = 9/397 (2%)
Frame = +1
Query: 33 IGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPMTHRSELNSN 92
+G G V L+C A +QK T ++ +K S+ I K F K R ++S
Sbjct: 7 LGKKGDTVELTCNA--SQKTTT---QFHWKN-SNQIKILGKQGSFLTKGSSKLRDRIDSR 168
Query: 93 SK-------KLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTL 145
+ + +L ++D+ Y C + + L VF LT +S+ H L + L LTL
Sbjct: 169 KSLWDQGCFSMIIKNLKIEDSETYICEVENKEEEVELLVFGLTANSDTHLLQGQSLTLTL 348
Query: 146 MQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSP 205
++ S P + + N L + QL+ DSGTW C+V +
Sbjct: 349 -ESPPGSSPSVKCRSPRGKN-----------IQGGRTLSVPQLERQDSGTWTCNVSQDQN 492
Query: 206 SINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKIKWKEGFTGKLNWEPQGNT 265
++ I D+ VL F+K +Y G S+ L F K +G+L W+ + +
Sbjct: 493 TVEFKI--DIVVLAFQKAS-STVYKKEGEQVEFSFPLAFTLEKLTG--SGELWWQAERAS 657
Query: 266 AIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKIPKV--QLNHSGQYKCQLE 323
+ + F++ + K + ++ GK +++ +P+ Q SG LE
Sbjct: 658 SSKSWITFNLKNKEVSVKQVTQDP---KLQMGK-KLPLNLTLPQALPQYAGSGNLTLALE 825
Query: 324 INGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPSNAHLLWERVNGTQMEMK 383
+ LVVM+ T + L C+V GP L + N
Sbjct: 826 AKTGKLHQEVNLVVMRATQF---------QENLTCEVWGPTSPKLMLSLKLEN---KAAT 969
Query: 384 KSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTV 420
SKQ +A +N A G+W C L + + N V
Sbjct: 970 VSKQAKAVWVLNPEA-GMWQCLLSDSGQVLLESNIKV 1077
>gb|AF001224.1|AF001224 Cercopithecus sabaeus CD4 (CD4) mRNA, partial cds
Length = 1192
Score = 63.2 bits (152), Expect = 6e-08
Identities = 95/397 (23%), Positives = 156/397 (38%), Gaps = 9/397 (2%)
Frame = +1
Query: 33 IGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPMTHRSELNSN 92
+G G V L+C A +QK T ++ +K S+ I K F K R ++S
Sbjct: 7 LGKKGDTVELTCNA--SQKTTT---QFHWKN-SNQIKILGKQGSFLTKGSSKLRDRIDSR 168
Query: 93 SK-------KLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTL 145
+ + +L ++D+ Y C + + L VF LT +S+ H L + L LTL
Sbjct: 169 KSLWDQGCFSMIIKNLKIEDSETYICEVENKEEEVELLVFGLTANSDTHLLQGQSLTLTL 348
Query: 146 MQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSP 205
++ S P + + N L + QL+ DSGTW C+V +
Sbjct: 349 -ESPPGSSPSVKCRSPRGKN-----------IQGGRTLSVPQLERQDSGTWTCNVSQDQN 492
Query: 206 SINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKIKWKEGFTGKLNWEPQGNT 265
++ I D+ VL F+K +Y G S+ L F K +G+L W+ + +
Sbjct: 493 TVEFKI--DIVVLAFQKAS-STVYKKEGEQVEFSFPLAFTLEKLTG--SGELWWQAERAS 657
Query: 266 AIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKIPKV--QLNHSGQYKCQLE 323
+ + F + + K + ++ GK +++ +P+ Q SG LE
Sbjct: 658 SSKSWITFDLKNKEVSVKQVTQDP---KLQMGK-KLPLNLTLPQALPQYAGSGNLTLALE 825
Query: 324 INGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPSNAHLLWERVNGTQMEMK 383
+ LVVM+ T + L C+V GP L + N
Sbjct: 826 AKTGKLHQEVNLVVMRATQF---------QENLTCEVWGPTSPKLMLSLKLEN---KAAT 969
Query: 384 KSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTV 420
SKQ +A +N A G+W C L + + N V
Sbjct: 970 VSKQAKAVWVLNPEA-GMWQCLLSDSGQVLLESNIKV 1077
>gb|AF001228.1| Cercopithecus aethiops (Barbados) CD4 (CD4) mRNA, partial cds
Length = 1192
Score = 62.8 bits (151), Expect = 7e-08
Identities = 92/397 (23%), Positives = 151/397 (37%), Gaps = 9/397 (2%)
Frame = +1
Query: 33 IGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPMTHRSELNSN 92
+G G V L+C A N T ++ +K S+ I K F K R ++S
Sbjct: 7 LGKKGDTVELTCNASQNT-----TTQFHWKN-SNQIKILGKQGSFLTKGSSKLRDRIDSR 168
Query: 93 SK-------KLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTL 145
+ + +L ++D+ Y C + + L VF LT +S+ H L + L LTL
Sbjct: 169 KSLWDQGCFSMIIKNLKIEDSETYICEVENKKEEVELLVFGLTANSDTHLLQGQSLTLTL 348
Query: 146 MQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSP 205
++ S P + + N L + QL+ DSGTW C V +
Sbjct: 349 -ESPPGSSPSVKCRSPRGKN-----------IQGGRTLSVPQLERQDSGTWTCTVSQDQN 492
Query: 206 SINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKIKWKEGFTGKLNWEPQGNT 265
++ I D+ VL F+K +Y G S+ L F K +G+L W+ + +
Sbjct: 493 TVEFKI--DIVVLAFQKAS-STVYKKEGEQVEFSFPLAFTLEKLTG--SGELWWQAERAS 657
Query: 266 AIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKIPKV--QLNHSGQYKCQLE 323
+ + F + + K + ++ GK +++ +P+ Q SG LE
Sbjct: 658 SSKSWITFDLKNKEVSVKQVTQDP---KLQMGK-KLPLNLTLPQALPQYAGSGNLTLALE 825
Query: 324 INGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPSNAHLLWERVNGTQMEMK 383
+ LVVM+ T + L C+V GP L + N K
Sbjct: 826 AKTGKLHQEVNLVVMRATQF---------QENLTCEVWGPTSPKLMLSLKLENKAATVSK 978
Query: 384 KSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTV 420
++K V V G+W C L + + N V
Sbjct: 979 QAK----AVWVLNPEEGMWQCLLSDSGQVLLESNIKV 1077
>gb|AF001227.1|AF001227 Cercopithecus pygerythrus CD4 (CD4) mRNA, partial cds
Length = 1192
Score = 62.8 bits (151), Expect = 7e-08
Identities = 92/397 (23%), Positives = 151/397 (37%), Gaps = 9/397 (2%)
Frame = +1
Query: 33 IGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPMTHRSELNSN 92
+G G V L+C A N T ++ +K S+ I K F K R ++S
Sbjct: 7 LGKKGDTVELTCNASQNT-----TTQFHWKN-SNQIKILGKQGSFLTKGSSKLRDRIDSR 168
Query: 93 SK-------KLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTL 145
+ + +L ++D+ Y C + + L VF LT +S+ H L + L LTL
Sbjct: 169 KSLWDQGCFSMIIKNLKIEDSETYICEVENKKEEVELLVFGLTANSDTHLLQGQSLTLTL 348
Query: 146 MQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSP 205
++ S P + + N L + QL+ DSGTW C V +
Sbjct: 349 -ESPPGSSPSVKCRSPRGKN-----------IQGGRTLSVPQLERQDSGTWTCTVSQDQN 492
Query: 206 SINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKIKWKEGFTGKLNWEPQGNT 265
++ I D+ VL F+K +Y G S+ L F K +G+L W+ + +
Sbjct: 493 TVEFKI--DIVVLAFQKAS-STVYKKEGEQVEFSFPLAFTLEKLTG--SGELWWQAERAS 657
Query: 266 AIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKIPKV--QLNHSGQYKCQLE 323
+ + F + + K + ++ GK +++ +P+ Q SG LE
Sbjct: 658 SSKSWITFDLKNKEVSVKQVTQDP---KLQMGK-KLPLNLTLPQALPQYAGSGNLTLALE 825
Query: 324 INGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPSNAHLLWERVNGTQMEMK 383
+ LVVM+ T + L C+V GP L + N K
Sbjct: 826 AKTGKLHQEVNLVVMRATQF---------QENLTCEVWGPTSPKLMLSLKLENKAATVSK 978
Query: 384 KSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTV 420
++K V V G+W C L + + N V
Sbjct: 979 QAK----AVWVLNPEEGMWQCLLSDSGQVLLESNIKV 1077
>gb|AF001225.1|AF001225 Cercopithecus sabaeus CD4 (CD4) mRNA, partial cds
Length = 1192
Score = 62.8 bits (151), Expect = 7e-08
Identities = 94/397 (23%), Positives = 152/397 (37%), Gaps = 9/397 (2%)
Frame = +1
Query: 33 IGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPMTHRSELNSN 92
+G G V L+C A N T ++ +K S+ I K F K R ++S
Sbjct: 7 LGKKGDTVELTCNASQNT-----TTQFHWKN-SNQIKILGKQGSFLTKGSSKLRDRIDSR 168
Query: 93 SK-------KLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTL 145
+ + +L ++D+ Y C + + L VF LT +S+ H L + L LTL
Sbjct: 169 KSLWDQGCFSMIIKNLKIEDSETYICEVENKKEEVELLVFGLTANSDTHLLQGQSLTLTL 348
Query: 146 MQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSP 205
++ S P + + N L + QL+ DSGTW C V +
Sbjct: 349 -ESPPGSSPSVKCRSPRGKN-----------IQGGRTLSVPQLERQDSGTWTCTVSQDQN 492
Query: 206 SINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKIKWKEGFTGKLNWEPQGNT 265
+ I D+ VL F+K +Y G S+ L F K +G+L W+ + +
Sbjct: 493 MVEFKI--DIVVLAFQKAS-STVYKKEGEQVEFSFPLAFTLEKLTG--SGELWWQAERAS 657
Query: 266 AIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKIPKV--QLNHSGQYKCQLE 323
+ + F + + K + ++ GK +++ +P+ Q SG LE
Sbjct: 658 SSKSWITFDLKNKEVSVKQVTQDP---KLQMGK-KLPLNLTLPQALPQYAGSGNLTLALE 825
Query: 324 INGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPSNAHLLWERVNGTQMEMK 383
+ LVVM+ T + L C+V GP L + N
Sbjct: 826 AKTGKLHQEVNLVVMRATQF---------QENLTCEVWGPTSPKLMLSLKLEN---KAAT 969
Query: 384 KSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTV 420
SKQ +A +N A G+W C L + + N V
Sbjct: 970 VSKQAKAVWVLNPEA-GMWQCLLSDSGQVLLESNIKV 1077
>emb|X73325.1|MNCD4 M.nemestrina CD4 mRNA
Length = 1192
Score = 62.8 bits (151), Expect = 7e-08
Identities = 97/428 (22%), Positives = 167/428 (38%), Gaps = 7/428 (1%)
Frame = +1
Query: 33 IGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPMTHRSELNSN 92
+G G V L+C A + +K+ WK + I+ + + KG + ++ R++ +
Sbjct: 7 LGKKGDTVELTCNA-SQKKNTQFHWKNSNQ---IKILGIQGSFLTKGPSKLSDRADSRKS 174
Query: 93 -----SKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTLMQ 147
+ + +L ++D+ Y C + L VF LT +S+ H L + L LTL +
Sbjct: 175 LWDQGHFSMIIKNLKIEDSDTYICEVEDEKEEVELLVFGLTANSDTHLLEGQSLTLTL-E 351
Query: 148 NSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSPSI 207
+ S P + + N L + QL+ DSGTW C V + ++
Sbjct: 352 SPPGSSPSVKCRSPGGKN-----------IQGGRTLSVPQLERQDSGTWTCTVSQDQKTV 498
Query: 208 NQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKIKWKEGFTGKLNWEPQGNTAI 267
I D+ VL F+K +Y G S+ L F K +G+L W+ + ++
Sbjct: 499 EFKI--DIVVLAFQKAS-STVYKKEGEQVEFSFPLAFTLEKLTG--SGELWWQAERASSS 663
Query: 268 HELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKIPKV--QLNHSGQYKCQLEIN 325
+ F + + K + ++ GK + + +P+ Q SG LE
Sbjct: 664 KSWITFDLKNKEVSVKRVTQDP---KLQMGK-KLPLHLTLPQALPQYAGSGNLTLALEAK 831
Query: 326 GRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPSNAHLLWERVNGTQMEMKKS 385
+ LVVM+ T + L C+V GP L + N S
Sbjct: 832 TGKLHQEVNLVVMRATQF---------QENLTCEVWGPTSPKLTLSLKLEN---KGATVS 975
Query: 386 KQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEAHVWNSYAVIGIIIGASVLVIGL 445
KQ +A +N A G+W C L + + N V + I++G G+
Sbjct: 976 KQAKAVWVLNPEA-GMWQCLLSDSGQVLLESNIKVVPTWPTPVQPMALIVLG------GV 1134
Query: 446 ACMCIITG 453
A + + TG
Sbjct: 1135AGLLLFTG 1158
>emb|X73322.1|CACD4 C.aethiops CD4 mRNA
Length = 1192
Score = 62.8 bits (151), Expect = 7e-08
Identities = 92/397 (23%), Positives = 151/397 (37%), Gaps = 9/397 (2%)
Frame = +1
Query: 33 IGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPMTHRSELNSN 92
+G G V L+C A N T ++ +K S+ I K F K R ++S
Sbjct: 7 LGKKGDTVELTCNASQNT-----TTQFHWKN-SNQIKILGKQGSFLTKGSSKLRDRIDSR 168
Query: 93 SK-------KLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTL 145
+ + +L ++D+ Y C + + L VF LT +S+ H L + L LTL
Sbjct: 169 KSLWDQGCFSMIIKNLKIEDSETYICEVENKKEEVELLVFGLTANSDTHLLQGQSLTLTL 348
Query: 146 MQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSP 205
++ S P + + N L + QL+ DSGTW C V +
Sbjct: 349 -ESPPGSSPSVKCRSPRGKN-----------IQGGRTLSVPQLERQDSGTWTCTVSQDQN 492
Query: 206 SINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKIKWKEGFTGKLNWEPQGNT 265
++ I D+ VL F+K +Y G S+ L F K +G+L W+ + +
Sbjct: 493 TVEFKI--DIVVLAFQKAS-STVYKKEGEQVEFSFPLAFTLEKLTG--SGELWWQAERAS 657
Query: 266 AIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKIPKV--QLNHSGQYKCQLE 323
+ + F + + K + ++ GK +++ +P+ Q SG LE
Sbjct: 658 SSKSWITFDLKNKEVSVKQVTQDP---KLQMGK-KLPLNLTLPQALPQYAGSGNLTLALE 825
Query: 324 INGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPSNAHLLWERVNGTQMEMK 383
+ LVVM+ T + L C+V GP L + N K
Sbjct: 826 AKTGKLHQEVNLVVMRATQF---------QENLTCEVWGPTSPKLMLSLKLENKAATVSK 978
Query: 384 KSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTV 420
++K V V G+W C L + + N V
Sbjct: 979 QAK----AVWVLNPEEGMWQCLLSDSGQVLLESNIKV 1077
>emb|X73326.1|MMCD4 M.mulatta CD4 mRNA
Length = 1192
Score = 62.0 bits (149), Expect = 1e-07
Identities = 96/428 (22%), Positives = 168/428 (38%), Gaps = 7/428 (1%)
Frame = +1
Query: 33 IGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPMTHRSELNSN 92
+G G V L+C A + +K+ WK + I+ + + KG + ++ R++ +
Sbjct: 7 LGKKGDTVELTCNA-SQKKNTQFHWKNSNQ---IKILGIQGSFLTKGPSKLSDRADSRKS 174
Query: 93 -----SKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTLMQ 147
+ + +L ++D+ Y C + + L VF LT +S+ H L + L LTL +
Sbjct: 175 LWDQGCFSMIIKNLKIEDSDTYICEVENKKEEVELLVFGLTANSDTHLLEGQSLTLTL-E 351
Query: 148 NSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSPSI 207
+ S P + + N + + QL+ DSGTW C V + ++
Sbjct: 352 SPPGSSPSVKCRSPGGKN-----------IQGGRTISVPQLERQDSGTWTCTVSQDQNTV 498
Query: 208 NQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKIKWKEGFTGKLNWEPQGNTAI 267
I D+ VL F+K +Y G S+ L F K +G+L W+ + ++
Sbjct: 499 EFKI--DIVVLAFQKAS-STVYKKEGEQVEFSFPLAFTLEKLTG--SGELWWQAERASSS 663
Query: 268 HELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKIPKV--QLNHSGQYKCQLEIN 325
+ F + + K + ++ GK + + +P+ Q SG LE
Sbjct: 664 KSWITFDLKNKEVSVKQVTQDP---KLQMGK-KLPLHLTLPQALPQYAGSGNLTLALEAK 831
Query: 326 GRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPSNAHLLWERVNGTQMEMKKS 385
+ LVVM+ T + L C+V GP L + N S
Sbjct: 832 TGKLHQEVNLVVMRATQF---------QENLTCEVWGPTSPKLTLSLKLEN---KGATVS 975
Query: 386 KQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTVEEAHVWNSYAVIGIIIGASVLVIGL 445
KQ +A +N A G+W C L + + N V + I++G G+
Sbjct: 976 KQAKAVWVLNPEA-GMWQCLLSDSGQVLLESNIKVVPTWPTPVQPMALIVLG------GV 1134
Query: 446 ACMCIITG 453
A + + TG
Sbjct: 1135AGLLLFTG 1158
>gb|AF001226.1|AF001226 Cercopithecus aethiops CD4 (CD4) mRNA, partial cds
Length = 1192
Score = 61.6 bits (148), Expect = 2e-07
Identities = 94/397 (23%), Positives = 152/397 (37%), Gaps = 9/397 (2%)
Frame = +1
Query: 33 IGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPMTHRSELNSN 92
+G G V L+C A +QK T ++ +K + T I K F K R ++S
Sbjct: 7 LGKKGDTVELTCNA--SQKTTT---QFHWKNSNQTKI-LGKQGSFLTKGSSKLRDRIDSR 168
Query: 93 SK-------KLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTL 145
+ + +L ++D+ Y C + + L VF LT +S+ H L + L LTL
Sbjct: 169 KSLWDQGCFSMIIKNLKIEDSETYICEVENKKEEVELLVFGLTANSDTHLLQGQSLTLTL 348
Query: 146 MQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSP 205
++ S P + + N V L + QL+ DSGTW C V +
Sbjct: 349 -ESPPGSSPSVKCRSPRGKNIQVGR-----------TLSVPQLERQDSGTWTCTVSQDQN 492
Query: 206 SINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKIKWKEGFTGKLNWEPQGNT 265
++ I D+ VL F+K +Y G S+ L K +G+L W+ + +
Sbjct: 493 TVEFKI--DIVVLAFQKAS-STVYKKEGEQVEFSFPLALTLEKLTG--SGELWWQAERAS 657
Query: 266 AIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKIPKV--QLNHSGQYKCQLE 323
+ + F + + K + E+ GK + + +P+ Q SG LE
Sbjct: 658 SSKSWITFDLKNKEVSVKQVTQDP---ELQMGK-KLPLHLTLPQALPQYAGSGNLTLALE 825
Query: 324 INGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPSNAHLLWERVNGTQMEMK 383
+ LVVM+ T + L C+V GP L + N K
Sbjct: 826 AKTGKLHQEVNLVVMRATQF---------QENLTCEVWGPTSPKLMLSLKLENKAATVSK 978
Query: 384 KSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTV 420
++K V V G+W C L + + N V
Sbjct: 979 QAK----AVWVLNPEEGMWQCLLSDSGQVLLESNIKV 1077
>emb|X73324.1|EPCD4 E.patas CD4 mRNA
Length = 1192
Score = 61.2 bits (147), Expect = 2e-07
Identities = 93/397 (23%), Positives = 156/397 (38%), Gaps = 9/397 (2%)
Frame = +1
Query: 33 IGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPMTHRSELNSN 92
+G G V L+C A +QK T ++ +K S+ + K F K P R +S
Sbjct: 7 LGKKGDTVELTCNA--SQKTTT---QFHWKN-SNQMKILGKQGSFLTKGPSKLRDRTDSR 168
Query: 93 SK-------KLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTL 145
+ + +L ++D+ Y C + L VF LT +S+ H L + L LTL
Sbjct: 169 KSLWDQGCFSMIIKNLKIEDSETYICEVEDKKEEVELLVFGLTANSDTHLLQGQSLTLTL 348
Query: 146 MQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSP 205
++ S P + + N L + QL+ DSGTW C V +
Sbjct: 349 -ESPPGSSPSVKCRSPRGKN-----------IQGGRTLSVPQLERQDSGTWTCTVSQDQN 492
Query: 206 SINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKIKWKEGFTGKLNWEPQGNT 265
++ I D+ VL F+K +Y G S+ L F K +G+L W+ + +
Sbjct: 493 TVEFKI--DIVVLAFQKAS-STVYKKEGEQVEFSFPLAFTLEKLTG--SGELWWQAERAS 657
Query: 266 AIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKIPKVQLNH--SGQYKCQLE 323
+ + F + ++E+ + + ++ E + + +P+ ++ SG LE
Sbjct: 658 SSKSWITFDL-KNKEVSVKRVTQDPKLQMGEKL---PLHLTLPQALPHYAGSGNLTLALE 825
Query: 324 INGRRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPSNAHLLWERVNGTQMEMK 383
+ LVVM+ T + L C+V GP L + N E
Sbjct: 826 AKTGKLHQEVNLVVMRATQF---------QENLTCEVWGPTSPKLTLSLKLEN---KEAT 969
Query: 384 KSKQHEAKVEVNVSAPGLWNCHLVEDNNKKISLNYTV 420
SKQ +A +N G+W C L + + N V
Sbjct: 970 ISKQAKAVWVLN-PEEGMWQCLLSDSGQVLLESNIKV 1077
>ref|NM_008479.1| Mus musculus lymphocyte-activation gene 3 (Lag3), mRNA
Length = 2003
Score = 50.8 bits (120), Expect = 3e-04
Identities = 87/381 (22%), Positives = 140/381 (35%), Gaps = 24/381 (6%)
Frame = +3
Query: 67 TIISFSKAQVFKGKAPMTHRSELNSNSKKLKVSDLSL-------DDAGIYTCACYSP--- 116
T++S + + G+ P+ +L L+ D SL DAG Y P
Sbjct: 642 TVLSVAPGGLRSGRQPLHPHVQLEERG--LQRGDFSLWLRPALRTDAGEYHATVRLPNRA 815
Query: 117 -VVSISLHVFKLT-ISSNGHFLTNEDLELTLMQNSSHSQPH--LSIKLFNINNDIVTTEI 172
S+ L V + + I+S L D L N S S+P +S+ F N +
Sbjct: 816 LSCSLRLRVGQASMIASPSGVLKLSDWVLL---NCSFSRPDRPVSVHWFQGQNRVPVYNS 986
Query: 173 LQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTV 232
+ + ++L L Q+ +DSGTW C V + N +I++++KVLG E +Y
Sbjct: 987 PRHFLAETFLL-LPQVSPLDSGTWGC-VLTYRDGFNVSITYNLKVLGLEPVAPLTVYAAE 1160
Query: 233 GNTAILSWRLNFRKIKWKEGFTGKL--NWEPQGNTAIHELLNFSVTTHQELHKTKKSNHI 290
G+ L L G L W P G
Sbjct: 1161GSRVELPCHL-----PPGVGTPSLLIAKWTPPGGGP------------------------ 1253
Query: 291 WFEISEGKTDGTMDVKIPKVQLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAG-PLS 349
E+ G + + V L +G Y C + + G++ + L V+ VT G P S
Sbjct: 1254--ELPVAGKSGNFTLHLEAVGLAQAGTYTCSIHLQGQQLNATVTLAVITVTPKSFGLPGS 1427
Query: 350 RGGKMTLLCQVSGPLPSNAHLLWERVN-------GTQMEMKKSKQHEAKVEVNVSAPGLW 402
RG LLC+V+ P +W +N G +E+++++ + W
Sbjct: 1428RG---KLLCEVT-PASGKERFVWRPLNNLSRSCPGPVLEIQEARLLAER----------W 1565
Query: 403 NCHLVEDNNKKISLNYTVEEA 423
C L E + Y E +
Sbjct: 1566QCQLYEGQRLLGATVYAAESS 1628
>emb|X98113.1|MMLAG3 M.musculus mRNA for LAG-3-like cell surface glycoprotein
Length = 2003
Score = 50.8 bits (120), Expect = 3e-04
Identities = 87/381 (22%), Positives = 140/381 (35%), Gaps = 24/381 (6%)
Frame = +3
Query: 67 TIISFSKAQVFKGKAPMTHRSELNSNSKKLKVSDLSL-------DDAGIYTCACYSP--- 116
T++S + + G+ P+ +L L+ D SL DAG Y P
Sbjct: 642 TVLSVAPGGLRSGRQPLHPHVQLEERG--LQRGDFSLWLRPALRTDAGEYHATVRLPNRA 815
Query: 117 -VVSISLHVFKLT-ISSNGHFLTNEDLELTLMQNSSHSQPH--LSIKLFNINNDIVTTEI 172
S+ L V + + I+S L D L N S S+P +S+ F N +
Sbjct: 816 LSCSLRLRVGQASMIASPSGVLKLSDWVLL---NCSFSRPDRPVSVHWFQGQNRVPVYNS 986
Query: 173 LQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTV 232
+ + ++L L Q+ +DSGTW C V + N +I++++KVLG E +Y
Sbjct: 987 PRHFLAETFLL-LPQVSPLDSGTWGC-VLTYRDGFNVSITYNLKVLGLEPVAPLTVYAAE 1160
Query: 233 GNTAILSWRLNFRKIKWKEGFTGKL--NWEPQGNTAIHELLNFSVTTHQELHKTKKSNHI 290
G+ L L G L W P G
Sbjct: 1161GSRVELPCHL-----PPGVGTPSLLIAKWTPPGGGP------------------------ 1253
Query: 291 WFEISEGKTDGTMDVKIPKVQLNHSGQYKCQLEINGRRTESVRALVVMQVTAIPAG-PLS 349
E+ G + + V L +G Y C + + G++ + L V+ VT G P S
Sbjct: 1254--ELPVAGKSGNFTLHLEAVGLAQAGTYTCSIHLQGQQLNATVTLAVITVTPKSFGLPGS 1427
Query: 350 RGGKMTLLCQVSGPLPSNAHLLWERVN-------GTQMEMKKSKQHEAKVEVNVSAPGLW 402
RG LLC+V+ P +W +N G +E+++++ + W
Sbjct: 1428RG---KLLCEVT-PASGKERFVWRPLNNLSRSCPGPVLEIQEARLLAER----------W 1565
Query: 403 NCHLVEDNNKKISLNYTVEEA 423
C L E + Y E +
Sbjct: 1566QCQLYEGQRLLGATVYAAESS 1628
>gb|L38966.1|GINANREFRB Ginglymostoma cirratum (clone JIIR11) antigen receptor gene
fragment
Length = 1548
Score = 44.3 bits (103), Expect = 0.026
Identities = 43/161 (26%), Positives = 75/161 (45%)
Frame = +3
Query: 37 GKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPMTHRSELNSNSKKL 96
G+ + ++C + T+ Y+ K S+ S SK G+ T SE S S L
Sbjct: 231 GESLTINCVLSDTSCAWDSTYWYRKKLDSTNEESTSKG----GRYVETVNSE--STSFSL 392
Query: 97 KVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTLMQNSSHSQPHL 156
+++DL+++D+G Y C Y+ V+S+ L +++ + + N DL L
Sbjct: 393 RINDLTVEDSGTYRCRAYT-VMSLILRHYRIPSNLP*N---NSDL--------------L 518
Query: 157 SIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWM 197
+ NI+ D V +++ Q+EA K +L + K G WM
Sbjct: 519 FLSTLNIDFDYVNSDL*QQEAGYK*LLPTFRRKIRTRGNWM 641
>ref|XM_079998.1| Lachesin, mRNA
Length = 2146
Score = 40.4 bits (93), Expect = 0.38
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 20/232 (8%)
Frame = +3
Query: 6 AVVSCVFAVILVLQLGLTPIMAQQEQQIGIAGKEVILSCKAINNQKDGTCTWKYKYKEVS 65
++ +CV++ +L L + + +AQ+ I +E I K I + C+ +Y KE +
Sbjct: 321 SISNCVWSTLL-LAIFVQQTLAQRTPTISYITQEQI---KDIGGTVEFDCSVQYA-KEYN 485
Query: 66 STIISFSKAQVFKGKAP--------MTHRSELNSNSKKLKVSDLSLDDAGIYTC-ACYSP 116
+ VF + R + NS++ KL++ D+ DAG YTC S
Sbjct: 486 VLFLKTDSDPVFLSTGSTLVIKDSRFSLRYDPNSSTYKLQIKDIQETDAGTYTCQVVIST 665
Query: 117 VVSISLHVFKLTI--------SSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIV 168
V +S V KL++ +S + +E E+ M+ + P +I NN I+
Sbjct: 666 VHKVSAEV-KLSVRRPPVISDNSTQSVVASEGSEVQ-MECYASGYPTPTITWRRENNAIL 839
Query: 169 TTEILQEEAPQKYI---LKLKQLKAIDSGTWMCHVYSNSPSINQNISFDVKV 217
T+ Y+ L++K +K D GT+ C V N S + +V+V
Sbjct: 840 PTD------SATYVGNTLRIKSVKKEDRGTYYC-VADNGVSKGDRRNINVEV 974
>gb|AY051829.1| Drosophila melanogaster LD33460 full length cDNA
Length = 2157
Score = 40.4 bits (93), Expect = 0.38
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 20/232 (8%)
Frame = +3
Query: 6 AVVSCVFAVILVLQLGLTPIMAQQEQQIGIAGKEVILSCKAINNQKDGTCTWKYKYKEVS 65
++ +CV++ +L L + + +AQ+ I +E I K I + C+ +Y KE +
Sbjct: 321 SISNCVWSTLL-LAIFVQQTLAQRTPTISYITQEQI---KDIGGTVEFDCSVQYA-KEYN 485
Query: 66 STIISFSKAQVFKGKAP--------MTHRSELNSNSKKLKVSDLSLDDAGIYTC-ACYSP 116
+ VF + R + NS++ KL++ D+ DAG YTC S
Sbjct: 486 VLFLKTDSDPVFLSTGSTLVIKDSRFSLRYDPNSSTYKLQIKDIQETDAGTYTCQVVIST 665
Query: 117 VVSISLHVFKLTI--------SSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIV 168
V +S V KL++ +S + +E E+ M+ + P +I NN I+
Sbjct: 666 VHKVSAEV-KLSVRRPPVISDNSTQSVVASEGSEVQ-MECYASGYPTPTITWRRENNAIL 839
Query: 169 TTEILQEEAPQKYI---LKLKQLKAIDSGTWMCHVYSNSPSINQNISFDVKV 217
T+ Y+ L++K +K D GT+ C V N S + +V+V
Sbjct: 840 PTD------SATYVGNTLRIKSVKKEDRGTYYC-VADNGVSKGDRRNINVEV 974
>ref|NM_078989.1| Drosophila melanogaster Lachesin (Lac), mRNA
Length = 2110
Score = 40.4 bits (93), Expect = 0.38
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 20/232 (8%)
Frame = +1
Query: 6 AVVSCVFAVILVLQLGLTPIMAQQEQQIGIAGKEVILSCKAINNQKDGTCTWKYKYKEVS 65
++ +CV++ +L L + + +AQ+ I +E I K I + C+ +Y KE +
Sbjct: 328 SISNCVWSTLL-LAIFVQQTLAQRTPTISYITQEQI---KDIGGTVEFDCSVQYA-KEYN 492
Query: 66 STIISFSKAQVFKGKAP--------MTHRSELNSNSKKLKVSDLSLDDAGIYTC-ACYSP 116
+ VF + R + NS++ KL++ D+ DAG YTC S
Sbjct: 493 VLFLKTDSDPVFLSTGSTLVIKDSRFSLRYDPNSSTYKLQIKDIQETDAGTYTCQVVIST 672
Query: 117 VVSISLHVFKLTI--------SSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIV 168
V +S V KL++ +S + +E E+ M+ + P +I NN I+
Sbjct: 673 VHKVSAEV-KLSVRRPPVISDNSTQSVVASEGSEVQ-MECYASGYPTPTITWRRENNAIL 846
Query: 169 TTEILQEEAPQKYI---LKLKQLKAIDSGTWMCHVYSNSPSINQNISFDVKV 217
T+ Y+ L++K +K D GT+ C V N S + +V+V
Sbjct: 847 PTD------SATYVGNTLRIKSVKKEDRGTYYC-VADNGVSKGDRRNINVEV 981
>gb|L13255.1|DROLACH Fruitfly lachesin mRNA, complete cds
Length = 2110
Score = 40.4 bits (93), Expect = 0.38
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 20/232 (8%)
Frame = +1
Query: 6 AVVSCVFAVILVLQLGLTPIMAQQEQQIGIAGKEVILSCKAINNQKDGTCTWKYKYKEVS 65
++ +CV++ +L L + + +AQ+ I +E I K I + C+ +Y KE +
Sbjct: 328 SISNCVWSTLL-LAIFVQQTLAQRTPTISYITQEQI---KDIGGTVEFDCSVQYA-KEYN 492
Query: 66 STIISFSKAQVFKGKAP--------MTHRSELNSNSKKLKVSDLSLDDAGIYTC-ACYSP 116
+ VF + R + NS++ KL++ D+ DAG YTC S
Sbjct: 493 VLFLKTDSDPVFLSTGSTLVIKDSRFSLRYDPNSSTYKLQIKDIQETDAGTYTCQVVIST 672
Query: 117 VVSISLHVFKLTI--------SSNGHFLTNEDLELTLMQNSSHSQPHLSIKLFNINNDIV 168
V +S V KL++ +S + +E E+ M+ + P +I NN I+
Sbjct: 673 VHKVSAEV-KLSVRRPPVISDNSTQSVVASEGSEVQ-MECYASGYPTPTITWRRENNAIL 846
Query: 169 TTEILQEEAPQKYI---LKLKQLKAIDSGTWMCHVYSNSPSINQNISFDVKV 217
T+ Y+ L++K +K D GT+ C V N S + +V+V
Sbjct: 847 PTD------SATYVGNTLRIKSVKKEDRGTYYC-VADNGVSKGDRRNINVEV 981
>ref|NM_017358.1| Rattus norvegicus immunoglobulin superfamily member (CDO), mRNA
Length = 4573
Score = 39.3 bits (90), Expect = 0.85
Identities = 72/307 (23%), Positives = 115/307 (37%), Gaps = 34/307 (11%)
Frame = +3
Query: 93 SKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTLMQNSSHS 152
S L++ ++S D G Y CA Y+PV S +L + G +L + + SS
Sbjct: 543 SGNLQILNVSSKDKGSYKCAAYNPVTS------ELKVEPAGR-------KLLVSRPSSDG 683
Query: 153 ----QPHLSIKLFNINNDIVTTEILQEEAPQKYILKLK---------------------Q 187
P LS L + + VT E + P + LK
Sbjct: 684 FHILHPALSQALAVLPHSPVTLECVVSGVPASQVYWLKDGQDCLSGSNWRRLYSHLATAS 863
Query: 188 LKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKI 247
+ DSG + C V +NS +++++ V VL A +S L+ +K+
Sbjct: 864 IDPADSGNYSCVVGNNSSGDVKHVTYTVNVL---------------EHASISKGLHDQKV 998
Query: 248 KWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKI 307
G T + E GN A + H S H+ T+G++ +KI
Sbjct: 999 SL--GATVRFTCEVHGNPAPNR-----TWFHNAQPIRPSSRHL--------TEGSV-LKI 1130
Query: 308 PKVQLNHSGQYKCQLEINGRRTESVRALVVMQ--------VTAIPAGPLSRGGKMTLLCQ 359
V + SG Y+C + +S L + Q VTA ++ G +TL C
Sbjct: 1131TGVIMEDSGLYQCMADNGIGFMQSTGRLQIEQDSGQRPVIVTAPANVEVTDGDFVTLSCN 1310
Query: 360 VSG-PLP 365
+G P+P
Sbjct: 1311ATGEPVP 1331
>gb|AF004840.1|AF004840 Rattus norvegicus CDO (cdo) mRNA, complete cds
Length = 4573
Score = 39.3 bits (90), Expect = 0.85
Identities = 72/307 (23%), Positives = 115/307 (37%), Gaps = 34/307 (11%)
Frame = +3
Query: 93 SKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTLMQNSSHS 152
S L++ ++S D G Y CA Y+PV S +L + G +L + + SS
Sbjct: 543 SGNLQILNVSSKDKGSYKCAAYNPVTS------ELKVEPAGR-------KLLVSRPSSDG 683
Query: 153 ----QPHLSIKLFNINNDIVTTEILQEEAPQKYILKLK---------------------Q 187
P LS L + + VT E + P + LK
Sbjct: 684 FHILHPALSQALAVLPHSPVTLECVVSGVPASQVYWLKDGQDCLSGSNWRRLYSHLATAS 863
Query: 188 LKAIDSGTWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKI 247
+ DSG + C V +NS +++++ V VL A +S L+ +K+
Sbjct: 864 IDPADSGNYSCVVGNNSSGDVKHVTYTVNVL---------------EHASISKGLHDQKV 998
Query: 248 KWKEGFTGKLNWEPQGNTAIHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKI 307
G T + E GN A + H S H+ T+G++ +KI
Sbjct: 999 SL--GATVRFTCEVHGNPAPNR-----TWFHNAQPIRPSSRHL--------TEGSV-LKI 1130
Query: 308 PKVQLNHSGQYKCQLEINGRRTESVRALVVMQ--------VTAIPAGPLSRGGKMTLLCQ 359
V + SG Y+C + +S L + Q VTA ++ G +TL C
Sbjct: 1131TGVIMEDSGLYQCMADNGIGFMQSTGRLQIEQDSGQRPVIVTAPANVEVTDGDFVTLSCN 1310
Query: 360 VSG-PLP 365
+G P+P
Sbjct: 1311ATGEPVP 1331
>ref|NM_077235.1| Ig superfamily repeats (I-type)
Length = 15528
Score = 39.3 bits (90), Expect = 0.85
Identities = 38/181 (20%), Positives = 79/181 (42%), Gaps = 11/181 (6%)
Frame = +1
Query: 83 MTHRSELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHF-LTNEDL 141
+T +++ + +KL +S SL++AG+YTC + SL FK+ I S ++ D+
Sbjct: 11149 LTDNVDISDDGRKLTISQASLENAGLYTCIALNRAGEASLE-FKVEILSPPVIDISRNDV 11325
Query: 142 -------ELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSG 194
+ T+M+ + P SIK ++ E ++ Q +L++ + + +G
Sbjct: 11326 QPQVAVNQPTIMRCAVTGHPFPSIKWLKNGKEVTDDENIR-IVEQGQVLQILRTDSDHAG 11502
Query: 195 TWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLN---FRKIKWKE 251
W C +++ + DV + + +G T L + + ++KW +
Sbjct: 11503 KWSCVAENDAGVKELEMVLDVFTPPVVSVKSDNPIKALGETITLFCNASGNPYPQLKWAK 11682
Query: 252 G 252
G
Sbjct: 11683 G 11685
Score = 38.9 bits (89), Expect = 1.1
Identities = 26/114 (22%), Positives = 50/114 (43%)
Frame = +1
Query: 28 QQEQQIGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPMTHRS 87
++E+ + G ++L+C A ++ + W + V + +I+ S
Sbjct: 8296 EREEVVARVGDTMLLTCNAESSVPLSSVYWHAHDESVQNGVIT----------------S 8427
Query: 88 ELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDL 141
+ +N K L V+++ LDD G Y C + I+ FKL + +FL + L
Sbjct: 8428 KYAANEKTLNVTNIQLDDEGFYYCTAVNE-AGITKKFFKLIVIETPYFLDQQKL 8586
Score = 37.7 bits (86), Expect = 2.5
Identities = 29/131 (22%), Positives = 59/131 (44%), Gaps = 4/131 (3%)
Frame = +1
Query: 91 SNSKKLKVSDLSLDDAGIYTCACYSPVVSISL----HVFKLTISSNGHFLTNEDLELTLM 146
S+S ++++++SL D G+YTC + S +L V + + SNG + EL ++
Sbjct: 12010 SDSTFIQINNVSLSDKGVYTCYAENVAGSDNLMYNVDVVQAPVISNGGTKQVIEGELAVI 12189
Query: 147 QNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSPS 206
+ P + N + T +L + + +++DSG ++C + + S
Sbjct: 12190 ECLVEGYPAPQVSWLRNGNRVETGVQGVRYVTDGRMLTIIEARSLDSGIYLCSATNEAGS 12369
Query: 207 INQNISFDVKV 217
Q + +V V
Sbjct: 12370 AQQAYTLEVLV 12402
>ref|NM_077234.1| IG (immunoglobulin) superfamily (47 domains)
Length = 15597
Score = 39.3 bits (90), Expect = 0.85
Identities = 38/181 (20%), Positives = 79/181 (42%), Gaps = 11/181 (6%)
Frame = +1
Query: 83 MTHRSELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHF-LTNEDL 141
+T +++ + +KL +S SL++AG+YTC + SL FK+ I S ++ D+
Sbjct: 11149 LTDNVDISDDGRKLTISQASLENAGLYTCIALNRAGEASLE-FKVEILSPPVIDISRNDV 11325
Query: 142 -------ELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSG 194
+ T+M+ + P SIK ++ E ++ Q +L++ + + +G
Sbjct: 11326 QPQVAVNQPTIMRCAVTGHPFPSIKWLKNGKEVTDDENIR-IVEQGQVLQILRTDSDHAG 11502
Query: 195 TWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLN---FRKIKWKE 251
W C +++ + DV + + +G T L + + ++KW +
Sbjct: 11503 KWSCVAENDAGVKELEMVLDVFTPPVVSVKSDNPIKALGETITLFCNASGNPYPQLKWAK 11682
Query: 252 G 252
G
Sbjct: 11683 G 11685
Score = 38.9 bits (89), Expect = 1.1
Identities = 26/114 (22%), Positives = 50/114 (43%)
Frame = +1
Query: 28 QQEQQIGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPMTHRS 87
++E+ + G ++L+C A ++ + W + V + +I+ S
Sbjct: 8296 EREEVVARVGDTMLLTCNAESSVPLSSVYWHAHDESVQNGVIT----------------S 8427
Query: 88 ELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDL 141
+ +N K L V+++ LDD G Y C + I+ FKL + +FL + L
Sbjct: 8428 KYAANEKTLNVTNIQLDDEGFYYCTAVNE-AGITKKFFKLIVIETPYFLDQQKL 8586
Score = 37.7 bits (86), Expect = 2.5
Identities = 29/131 (22%), Positives = 59/131 (44%), Gaps = 4/131 (3%)
Frame = +1
Query: 91 SNSKKLKVSDLSLDDAGIYTCACYSPVVSISL----HVFKLTISSNGHFLTNEDLELTLM 146
S+S ++++++SL D G+YTC + S +L V + + SNG + EL ++
Sbjct: 12010 SDSTFIQINNVSLSDKGVYTCYAENVAGSDNLMYNVDVVQAPVISNGGTKQVIEGELAVI 12189
Query: 147 QNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSPS 206
+ P + N + T +L + + +++DSG ++C + + S
Sbjct: 12190 ECLVEGYPAPQVSWLRNGNRVETGVQGVRYVTDGRMLTIIEARSLDSGIYLCSATNEAGS 12369
Query: 207 INQNISFDVKV 217
Q + +V V
Sbjct: 12370 AQQAYTLEVLV 12402
>gb|AF074901.1|AF074901 Caenorhabditis elegans hemicentin precursor (him-4) mRNA, complete cds
Length = 15597
Score = 39.3 bits (90), Expect = 0.85
Identities = 38/181 (20%), Positives = 79/181 (42%), Gaps = 11/181 (6%)
Frame = +1
Query: 83 MTHRSELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHF-LTNEDL 141
+T +++ + +KL +S SL++AG+YTC + SL FK+ I S ++ D+
Sbjct: 11149 LTDNVDISDDGRKLTISQASLENAGLYTCIALNRAGEASLE-FKVEILSPPVIDISRNDV 11325
Query: 142 -------ELTLMQNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSG 194
+ T+M+ + P SIK ++ E ++ Q +L++ + + +G
Sbjct: 11326 QPQVAVNQPTIMRCAVTGHPFPSIKWLKNGKEVTDDENIR-IVEQGQVLQILRTDSDHAG 11502
Query: 195 TWMCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLN---FRKIKWKE 251
W C +++ + DV + + +G T L + + ++KW +
Sbjct: 11503 KWSCVAENDAGVKELEMVLDVFTPPVVSVKSDNPIKALGETITLFCNASGNPYPQLKWAK 11682
Query: 252 G 252
G
Sbjct: 11683 G 11685
Score = 38.9 bits (89), Expect = 1.1
Identities = 26/114 (22%), Positives = 50/114 (43%)
Frame = +1
Query: 28 QQEQQIGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPMTHRS 87
++E+ + G ++L+C A ++ + W + V + +I+ S
Sbjct: 8296 EREEVVARVGDTMLLTCNAESSVPLSSVYWHAHDESVQNGVIT----------------S 8427
Query: 88 ELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDL 141
+ +N K L V+++ LDD G Y C + I+ FKL + +FL + L
Sbjct: 8428 KYAANEKTLNVTNIQLDDEGFYYCTAVNE-AGITKKFFKLIVIETPYFLDQQKL 8586
Score = 37.7 bits (86), Expect = 2.5
Identities = 29/131 (22%), Positives = 59/131 (44%), Gaps = 4/131 (3%)
Frame = +1
Query: 91 SNSKKLKVSDLSLDDAGIYTCACYSPVVSISL----HVFKLTISSNGHFLTNEDLELTLM 146
S+S ++++++SL D G+YTC + S +L V + + SNG + EL ++
Sbjct: 12010 SDSTFIQINNVSLSDKGVYTCYAENVAGSDNLMYNVDVVQAPVISNGGTKQVIEGELAVI 12189
Query: 147 QNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSPS 206
+ P + N + T +L + + +++DSG ++C + + S
Sbjct: 12190 ECLVEGYPAPQVSWLRNGNRVETGVQGVRYVTDGRMLTIIEARSLDSGIYLCSATNEAGS 12369
Query: 207 INQNISFDVKV 217
Q + +V V
Sbjct: 12370 AQQAYTLEVLV 12402
>emb|AJ002535.1|HSAJ2535 Homo sapiens mRNA for obscurin (OBSCN gene)
Length = 20435
Score = 38.9 bits (89), Expect = 1.1
Identities = 70/352 (19%), Positives = 139/352 (38%), Gaps = 18/352 (5%)
Frame = +3
Query: 88 ELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTLMQ 147
+ ++ + L V D++ DDAG+Y C ++ ++L++ FL ++D+ + +
Sbjct: 2334 QASAGRRVLLVRDVARDDAGLYECVSRGGRIA-----YQLSVQGLARFL-HKDMAGSCVD 2495
Query: 148 ---------NSSHSQPHLSIKLFNINNDIVTT--EILQEEAPQKYILKLKQLKAIDSGTW 196
S+ H+ + + ++ + LQE+ ++ L + D GT+
Sbjct: 2496 AVAGGPAQFECETSEAHVHVHWYKDGMELGHSGERFLQEDVGTRHRLVAATVTRQDEGTY 2675
Query: 197 MCHVYSNSPSINQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKIKWKEGFTGK 256
C V +S +S + KV+ F KE+L RK++ + G +
Sbjct: 2676 SCR