TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(736 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,165,784 sequences; 601,717,568 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
gb|U46563.1|GGU46563 Gallus gallus homeodomain protein (Pro... 1343 0.0
ref|NM_008937.1| Mus musculus prospero-related homeobox 1 (... 1271 0.0
gb|AF061576.1|AF061576 Mus musculus prospero-related homeob... 1271 0.0
ref|XM_001994.4| Homo sapiens prospero-related homeobox 1 (... 1269 0.0
ref|NM_002763.1| Homo sapiens prospero-related homeobox 1 (... 1257 0.0
gb|U44060.1|HSU44060 Human homeodomain protein (Prox 1) mRN... 1257 0.0
dbj|AB008773.1|AB008773 Xenopus laevis Prox 1 mRNA, complet... 1191 0.0
gb|AY032595.1| Danio rerio prospero-related homeodomain pro... 1102 0.0
gb|AF063018.1|AF063018 Danio rerio homeodomain protein (Pro... 1102 0.0
dbj|AB008774.1|AB008774 Cynops pyrrhogaster mRNA, partial cds 1092 0.0
emb|AL606537.10|AL606537 Human DNA sequence from clone RP11... 939 0.0
gb|AC011700.5|AC011700 Homo sapiens Chromosome 1 BAC RP11-4... 939 0.0
gb|AF070733.1|AF070733 Notophthalmus viridescens transcript... 557 e-156
gb|AF069290.1|AF069290 Xenopus laevis Prox1 mRNA, partial cds 262 1e-67
ref|XM_063420.1| Homo sapiens similar to HOMEOBOX PROSPERO-... 220 4e-55
gb|AY060680.1| Drosophila melanogaster GH11848 full length ... 211 2e-52
dbj|D10609.1|DROPROSA Drosophila melanogaster mRNA for pros... 211 3e-52
ref|NM_079593.1| Drosophila melanogaster prospero (pros), mRNA 211 3e-52
emb|Z11743.1|DMPROSPER D. melanogaster prospero gene encodi... 211 3e-52
gb|M81389.1|DROPROS D.melanogaster Pros protein (prospero) ... 211 3e-52
ref|XM_081366.1| prospero, mRNA 211 3e-52
ref|NM_066359.1| Caenorhabditis elegans 210 5e-52
gb|AC006530.4|AC006530 Homo sapiens chromosome 14 clone BAC... 114 3e-23
gb|U40760.1|FRU40760 Fugu rubripes prospero_like protein ge... 105 2e-20
gb|L14331.1| Caenorhabditis elegans cosmid K12H4, complete ... 88 3e-15
gb|AC008358.4|AC008358 Drosophila melanogaster, chromosome ... 78 4e-12
gb|AF190403.1|AF190403 Drosophila melanogaster homeodomain ... 78 4e-12
gb|AE003691.2|AE003691 Drosophila melanogaster genomic scaf... 78 4e-12
gb|AF190405.1|AF190405 Drosophila virilis homeodomain trans... 78 4e-12
gb|AC007710.11|AC007710 Drosophila melanogaster, chromosome... 78 4e-12
gb|AC007709.4|AC007709 Drosophila melanogaster, chromosome ... 75 2e-11
gb|AY040548.1| Ateles belzebuth chamek prospero-related hom... 73 1e-10
ref|XM_063419.1| Homo sapiens similar to homeobox prospero-... 60 8e-07
dbj|AK006828.1|AK006828 Mus musculus adult male testis cDNA... 47 0.009
>gb|U46563.1|GGU46563 Gallus gallus homeodomain protein (Prox 1) mRNA, complete cds
Length = 3322
Score = 1343 bits (3477), Expect = 0.0
Identities = 680/736 (92%), Positives = 680/736 (92%)
Frame = +2
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 68 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 247
Query: 61 HADGEKPNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKPNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 248 HADGEKPNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 427
Query: 121 SEVHQEDVCSNSSRDSPQECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQEDVCSNSSRDSPQECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 428 SEVHQEDVCSNSSRDSPQECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 607
Query: 181 RVALRGNENEREIRPQSVSPRESYRENKRKXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
RVALRGNENEREIRPQSVSPRESYRENKRK LVSA
Sbjct: 608 RVALRGNENEREIRPQSVSPRESYRENKRKQNWPQQQQQSFQQLVSARKEQKREERRQLK 787
Query: 241 XXXXDMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMRSETVDAQAGDSVGRSDNEMC 300
DMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMRSETVDAQAGDSVGRSDNEMC
Sbjct: 788 QQLEDMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMRSETVDAQAGDSVGRSDNEMC 967
Query: 301 ELDPGQFIDRARALIREQEIGENKPKREGPKEKDQGPNSFHPEGKHLAETLKQELNTAMS 360
ELDPGQFIDRARALIREQEIGENKPKREGPKEKDQGPNSFHPEGKHLAETLKQELNTAMS
Sbjct: 968 ELDPGQFIDRARALIREQEIGENKPKREGPKEKDQGPNSFHPEGKHLAETLKQELNTAMS 1147
Query: 361 QVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNPL 420
QVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNPL
Sbjct: 1148QVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNPL 1327
Query: 421 DTFSSVPMPGATDQTDALPLVVRKNSSDQXXXXXXXXXXXXXLHQSPLSATAGFSTSSFR 480
DTFSSVPMPGATDQTDALPLVVRKNSSDQ LHQSPLSATAGFSTSSFR
Sbjct: 1328DTFSSVPMPGATDQTDALPLVVRKNSSDQPASAPPAGGHHASLHQSPLSATAGFSTSSFR 1507
Query: 481 HPFPLPLMAYPFQSPLGAPSASFPGKERASPESLDLTRETTSLRTKMSSHHMNXXXXXXX 540
HPFPLPLMAYPFQSPLGAPSASFPGKERASPESLDLTRETTSLRTKMSSHHMN
Sbjct: 1508HPFPLPLMAYPFQSPLGAPSASFPGKERASPESLDLTRETTSLRTKMSSHHMNHHPCSPA 1687
Query: 541 XXXXXXEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSSN 600
EGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSSN
Sbjct: 1688HPPSAAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSSN 1867
Query: 601 MLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCEL 660
MLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCEL
Sbjct: 1868MLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCEL 2047
Query: 661 YRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEV 720
YRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEV
Sbjct: 2048YRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEV 2227
Query: 721 PEIFKSPNCLQELLHE 736
PEIFKSPNCLQELLHE
Sbjct: 2228PEIFKSPNCLQELLHE 2275
>ref|NM_008937.1| Mus musculus prospero-related homeobox 1 (Prox1), mRNA
Length = 2520
Score = 1271 bits (3288), Expect = 0.0
Identities = 642/737 (87%), Positives = 662/737 (89%), Gaps = 1/737 (0%)
Frame = +2
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 68 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 247
Query: 61 HADGEKPNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEK NVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 248 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 427
Query: 121 SEVHQEDVCSNSSRDSPQECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQED+CSNSSRDSP ECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 428 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 607
Query: 181 RVALRGNENEREIRPQSVSPRESYRENKRKXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
VALRGNENERE+ PQSVSPRESYRENKRK LVSA
Sbjct: 608 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 787
Query: 241 XXXXDMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMRSETVDAQAGDSVGRSDNEMC 300
DMQKQLRQLQE+FYQ+YDSTDSENDEDG+LSED MRSE +DA+A DSVGRSDNEMC
Sbjct: 788 QQLEDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMC 967
Query: 301 ELDPGQFIDRARALIREQEIGENKPKREGP-KEKDQGPNSFHPEGKHLAETLKQELNTAM 359
ELDPGQFIDRARALIREQE+ ENKPKREG KE+D GPNS PEGKHLAETLKQELNTAM
Sbjct: 968 ELDPGQFIDRARALIREQEMAENKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNTAM 1147
Query: 360 SQVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 419
SQVVDTVVKVFS+KPSRQ+PQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 1148SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 1327
Query: 420 LDTFSSVPMPGATDQTDALPLVVRKNSSDQXXXXXXXXXXXXXLHQSPLSATAGFSTSSF 479
LDTF SV MP +TDQT+ALPLVVRKNSS+Q LHQSPLSATAGF+T SF
Sbjct: 1328LDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSF 1507
Query: 480 RHPFPLPLMAYPFQSPLGAPSASFPGKERASPESLDLTRETTSLRTKMSSHHMNXXXXXX 539
RHPFPLPLMAYPFQSPLGAPS SF GK+RASPESLDLTR+TTSLRTKMSSHH++
Sbjct: 1508RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 1687
Query: 540 XXXXXXXEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 599
EGLSLSLIKSECGDLQDMS+ISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS
Sbjct: 1688AHPPSTAEGLSLSLIKSECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 1867
Query: 600 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 659
NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE
Sbjct: 1868NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 2047
Query: 660 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 719
LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE
Sbjct: 2048LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 2227
Query: 720 VPEIFKSPNCLQELLHE 736
VPEIFKSPNCLQELLHE
Sbjct: 2228VPEIFKSPNCLQELLHE 2278
>gb|AF061576.1|AF061576 Mus musculus prospero-related homeobox 1 (Prox1) mRNA, complete cds
Length = 2520
Score = 1271 bits (3288), Expect = 0.0
Identities = 642/737 (87%), Positives = 662/737 (89%), Gaps = 1/737 (0%)
Frame = +2
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 68 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 247
Query: 61 HADGEKPNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEK NVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 248 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 427
Query: 121 SEVHQEDVCSNSSRDSPQECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQED+CSNSSRDSP ECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 428 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 607
Query: 181 RVALRGNENEREIRPQSVSPRESYRENKRKXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
VALRGNENERE+ PQSVSPRESYRENKRK LVSA
Sbjct: 608 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 787
Query: 241 XXXXDMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMRSETVDAQAGDSVGRSDNEMC 300
DMQKQLRQLQE+FYQ+YDSTDSENDEDG+LSED MRSE +DA+A DSVGRSDNEMC
Sbjct: 788 QQLEDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMC 967
Query: 301 ELDPGQFIDRARALIREQEIGENKPKREGP-KEKDQGPNSFHPEGKHLAETLKQELNTAM 359
ELDPGQFIDRARALIREQE+ ENKPKREG KE+D GPNS PEGKHLAETLKQELNTAM
Sbjct: 968 ELDPGQFIDRARALIREQEMAENKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNTAM 1147
Query: 360 SQVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 419
SQVVDTVVKVFS+KPSRQ+PQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 1148SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 1327
Query: 420 LDTFSSVPMPGATDQTDALPLVVRKNSSDQXXXXXXXXXXXXXLHQSPLSATAGFSTSSF 479
LDTF SV MP +TDQT+ALPLVVRKNSS+Q LHQSPLSATAGF+T SF
Sbjct: 1328LDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSF 1507
Query: 480 RHPFPLPLMAYPFQSPLGAPSASFPGKERASPESLDLTRETTSLRTKMSSHHMNXXXXXX 539
RHPFPLPLMAYPFQSPLGAPS SF GK+RASPESLDLTR+TTSLRTKMSSHH++
Sbjct: 1508RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 1687
Query: 540 XXXXXXXEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 599
EGLSLSLIKSECGDLQDMS+ISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS
Sbjct: 1688AHPPSTAEGLSLSLIKSECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 1867
Query: 600 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 659
NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE
Sbjct: 1868NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 2047
Query: 660 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 719
LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE
Sbjct: 2048LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 2227
Query: 720 VPEIFKSPNCLQELLHE 736
VPEIFKSPNCLQELLHE
Sbjct: 2228VPEIFKSPNCLQELLHE 2278
>ref|XM_001994.4| Homo sapiens prospero-related homeobox 1 (PROX1), mRNA
Length = 2927
Score = 1269 bits (3284), Expect = 0.0
Identities = 642/737 (87%), Positives = 661/737 (89%), Gaps = 1/737 (0%)
Frame = +3
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 609 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 788
Query: 61 HADGEKPNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEK NVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 789 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 968
Query: 121 SEVHQEDVCSNSSRDSPQECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQED+CSNSSRDSP ECLSPFGRPTMSQFD+DRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 969 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 1148
Query: 181 RVALRGNENEREIRPQSVSPRESYRENKRKXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
VALRGNENERE+ PQSVSPRESYRENKRK LVSA
Sbjct: 1149 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 1328
Query: 241 XXXXDMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMRSETVDAQAGDSVGRSDNEMC 300
DMQKQLRQLQE+FYQIYDSTDSENDEDGNLSED MRSE +DA+A DSVGRSDNEMC
Sbjct: 1329 QQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 1508
Query: 301 ELDPGQFIDRARALIREQEIGENKPKREGP-KEKDQGPNSFHPEGKHLAETLKQELNTAM 359
ELDPGQFIDRARALIREQE+ ENKPKREG KE+D GPNS PEGKHLAETLKQELNTAM
Sbjct: 1509 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 1688
Query: 360 SQVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 419
SQVVDTVVKVFS+KPSRQ+PQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 1689 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 1868
Query: 420 LDTFSSVPMPGATDQTDALPLVVRKNSSDQXXXXXXXXXXXXXLHQSPLSATAGFSTSSF 479
LDTF +V M +TDQT+ALPLVVRKNSSDQ LHQSPLSAT GF+TS+F
Sbjct: 1869 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASGPAAGGHHQPLHQSPLSATTGFTTSTF 2048
Query: 480 RHPFPLPLMAYPFQSPLGAPSASFPGKERASPESLDLTRETTSLRTKMSSHHMNXXXXXX 539
RHPFPLPLMAYPFQSPLGAPS SF GK+RASPESLDLTR+TTSLRTKMSSHH++
Sbjct: 2049 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 2228
Query: 540 XXXXXXXEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 599
EGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS
Sbjct: 2229 AHPPSTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 2408
Query: 600 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 659
NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE
Sbjct: 2409 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 2588
Query: 660 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 719
LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE
Sbjct: 2589 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 2768
Query: 720 VPEIFKSPNCLQELLHE 736
VPEIFKSPNCLQELLHE
Sbjct: 2769 VPEIFKSPNCLQELLHE 2819
>ref|NM_002763.1| Homo sapiens prospero-related homeobox 1 (PROX1), mRNA
Length = 2924
Score = 1257 bits (3253), Expect = 0.0
Identities = 638/737 (86%), Positives = 658/737 (88%), Gaps = 1/737 (0%)
Frame = +1
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 607 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 786
Query: 61 HADGEKPNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEK NVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 787 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 966
Query: 121 SEVHQEDVCSNSSRDSPQECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQED+CSNSSRDSP ECLSPFGRPTMSQFD+DRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 967 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 1146
Query: 181 RVALRGNENEREIRPQSVSPRESYRENKRKXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
VALRGNENERE+ PQSVSPRESYRENKRK LVSA
Sbjct: 1147 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 1326
Query: 241 XXXXDMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMRSETVDAQAGDSVGRSDNEMC 300
DMQKQL +QE+FYQIYDSTDSENDEDGNLSED MRSE +DA+A DSVGRSDNEMC
Sbjct: 1327 QQLEDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 1506
Query: 301 ELDPGQFIDRARALIREQEIGENKPKREGP-KEKDQGPNSFHPEGKHLAETLKQELNTAM 359
ELDPGQFIDRARALIREQE+ ENKPKREG KE+D GPNS PEGKHLAETLKQELNTAM
Sbjct: 1507 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 1686
Query: 360 SQVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 419
SQVVDTVVKVFS+KPSRQ+PQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 1687 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 1866
Query: 420 LDTFSSVPMPGATDQTDALPLVVRKNSSDQXXXXXXXXXXXXXLHQSPLSATAGFSTSSF 479
LDTF +V M +TDQT+ALPLVVRKNSSDQ LHQSPLSAT GF+TS+F
Sbjct: 1867 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASGLVGGHHQP-LHQSPLSATTGFTTSTF 2043
Query: 480 RHPFPLPLMAYPFQSPLGAPSASFPGKERASPESLDLTRETTSLRTKMSSHHMNXXXXXX 539
RHPFPLPLMAYPFQSPLGAPS SF GK+RASPESLDLTR+TTSLRTKMSSHH++
Sbjct: 2044 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 2223
Query: 540 XXXXXXXEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 599
EGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS
Sbjct: 2224 AHPPSTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 2403
Query: 600 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 659
NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE
Sbjct: 2404 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 2583
Query: 660 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 719
LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE
Sbjct: 2584 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 2763
Query: 720 VPEIFKSPNCLQELLHE 736
VPE FKSPNCLQELLHE
Sbjct: 2764 VPEFFKSPNCLQELLHE 2814
>gb|U44060.1|HSU44060 Human homeodomain protein (Prox 1) mRNA, complete cds
Length = 2924
Score = 1257 bits (3253), Expect = 0.0
Identities = 638/737 (86%), Positives = 658/737 (88%), Gaps = 1/737 (0%)
Frame = +1
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 607 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 786
Query: 61 HADGEKPNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEK NVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 787 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 966
Query: 121 SEVHQEDVCSNSSRDSPQECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQED+CSNSSRDSP ECLSPFGRPTMSQFD+DRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 967 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 1146
Query: 181 RVALRGNENEREIRPQSVSPRESYRENKRKXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
VALRGNENERE+ PQSVSPRESYRENKRK LVSA
Sbjct: 1147 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 1326
Query: 241 XXXXDMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMRSETVDAQAGDSVGRSDNEMC 300
DMQKQL +QE+FYQIYDSTDSENDEDGNLSED MRSE +DA+A DSVGRSDNEMC
Sbjct: 1327 QQLEDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 1506
Query: 301 ELDPGQFIDRARALIREQEIGENKPKREGP-KEKDQGPNSFHPEGKHLAETLKQELNTAM 359
ELDPGQFIDRARALIREQE+ ENKPKREG KE+D GPNS PEGKHLAETLKQELNTAM
Sbjct: 1507 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 1686
Query: 360 SQVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 419
SQVVDTVVKVFS+KPSRQ+PQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 1687 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 1866
Query: 420 LDTFSSVPMPGATDQTDALPLVVRKNSSDQXXXXXXXXXXXXXLHQSPLSATAGFSTSSF 479
LDTF +V M +TDQT+ALPLVVRKNSSDQ LHQSPLSAT GF+TS+F
Sbjct: 1867 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASGLVGGHHQP-LHQSPLSATTGFTTSTF 2043
Query: 480 RHPFPLPLMAYPFQSPLGAPSASFPGKERASPESLDLTRETTSLRTKMSSHHMNXXXXXX 539
RHPFPLPLMAYPFQSPLGAPS SF GK+RASPESLDLTR+TTSLRTKMSSHH++
Sbjct: 2044 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 2223
Query: 540 XXXXXXXEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 599
EGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS
Sbjct: 2224 AHPPSTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 2403
Query: 600 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 659
NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE
Sbjct: 2404 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 2583
Query: 660 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 719
LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE
Sbjct: 2584 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 2763
Query: 720 VPEIFKSPNCLQELLHE 736
VPE FKSPNCLQELLHE
Sbjct: 2764 VPEFFKSPNCLQELLHE 2814
>dbj|AB008773.1|AB008773 Xenopus laevis Prox 1 mRNA, complete cds
Length = 2483
Score = 1191 bits (3081), Expect = 0.0
Identities = 603/740 (81%), Positives = 642/740 (86%), Gaps = 4/740 (0%)
Frame = +1
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDST LLSRQTKRRRVDIGVKRTVGTASAFFAKA ATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 1 MPDHDSTGLLSRQTKRRRVDIGVKRTVGTASAFFAKASATFFSAMNPQGSEQDVEYSVVQ 180
Query: 61 HADGEKPNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEK NVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKN GTEPSFQASGLSS G
Sbjct: 181 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNCGTEPSFQASGLSSAG 360
Query: 121 SEVHQEDVCSNSSRDSPQECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SE+HQED C NSSRDSPQECLSPFGRPTM+Q+D+DRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 361 SEIHQEDACINSSRDSPQECLSPFGRPTMNQYDMDRLCDEHLRAKRARVENIIRGMSHSP 540
Query: 181 RVALRGNENEREIRPQSVSPRESYRENKRKXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
VALRGNEN+R+ P+S+SPRESYREN+RK LVSA
Sbjct: 541 NVALRGNENDRDGAPRSISPRESYRENRRKQKLPQQQQQSFQELVSARKEQKREERRQLK 720
Query: 241 XXXXDMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMRSETVDAQAGDSVGRSDNEMC 300
DMQKQLRQLQE+FYQIYDSTDSEN+EDGNLSED M SE +DA+A DS+GRS+NEM
Sbjct: 721 QQLEDMQKQLRQLQEKFYQIYDSTDSENNEDGNLSEDGMHSEIIDARAQDSMGRSNNEMF 900
Query: 301 ELDPGQFIDRARALIREQEI-GENKPKREG-PKEKDQGPNSFHPEGKHLAETLKQELNTA 358
+LDPGQFIDRARALIRE +I +N K++ PK+KD + F PEGKHLAE LKQELN A
Sbjct: 901 DLDPGQFIDRARALIREHQIASDNHHKKDAPPKDKDNLHHPFQPEGKHLAEALKQELNAA 1080
Query: 359 MSQVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPN 418
M+QVVDTVVKVFS+KP RQLPQVFPPLQIPQARFA+NGE+HNFHTANQRLQCFGDVIIPN
Sbjct: 1081MAQVVDTVVKVFSAKPIRQLPQVFPPLQIPQARFAINGEHHNFHTANQRLQCFGDVIIPN 1260
Query: 419 PLDTFSSVPMPGATDQTDALPLVVRKNSSDQXXXXXXXXXXXXXLHQSPLSATAGFSTSS 478
PLDTFS+VPMP +TDQT+ALPLVVRKNS+DQ LHQSPLSA A FS+SS
Sbjct: 1261PLDTFSNVPMPSSTDQTEALPLVVRKNSNDQSASGPPPGSHHPSLHQSPLSAAASFSSSS 1440
Query: 479 FRHPFPLPLMAYPFQSPLGAPSASFPGKERASPESLDLTRETTSLRTKMSSHHMNXXXXX 538
FRHPFPLPLMAYPFQ+PLGAP SF GK+ +SPESLDLTRETTSLRTKMSSHHMN
Sbjct: 1441FRHPFPLPLMAYPFQNPLGAPFISFQGKDSSSPESLDLTRETTSLRTKMSSHHMNHHPCS 1620
Query: 539 XXXXXXXXEGLSLSLIKSECGDLQDMSEISPYSGSA--MQEGLSPNHLKKAKLMFFYTRY 596
EGLSLS IKSECGD+QDMS+ISPYSGSA MQEGLSPNHLKKAKLMFFYTRY
Sbjct: 1621PAHPPSSTEGLSLSFIKSECGDMQDMSDISPYSGSALYMQEGLSPNHLKKAKLMFFYTRY 1800
Query: 597 PSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITR 656
PSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDG+TSTEEL ITR
Sbjct: 1801PSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGITSTEELCITR 1980
Query: 657 DCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKL 716
DCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWK AIYKVICKL
Sbjct: 1981DCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKNAIYKVICKL 2160
Query: 717 DSEVPEIFKSPNCLQELLHE 736
DSEVP+IF+SPNCLQELLHE
Sbjct: 2161DSEVPDIFRSPNCLQELLHE 2220
>gb|AY032595.1| Danio rerio prospero-related homeodomain protein 1 (prox1) mRNA,
complete cds
Length = 2839
Score = 1102 bits (2850), Expect = 0.0
Identities = 566/741 (76%), Positives = 617/741 (82%), Gaps = 5/741 (0%)
Frame = +1
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDST+LLSRQTKRRRVDIGVKRTVG AS F +A+ATF SAMNP GSEQDVE SVVQ
Sbjct: 58 MPDHDSTSLLSRQTKRRRVDIGVKRTVGQASVVFTRAKATFLSAMNPHGSEQDVECSVVQ 237
Query: 61 HADGEKPNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEK NVLRKLLKRANSYEDA+MPFPGATIISQLLKNN+ KNGG+EP+FQ SGLSSTG
Sbjct: 238 HADGEKSNVLRKLLKRANSYEDAVMPFPGATIISQLLKNNLTKNGGSEPNFQGSGLSSTG 417
Query: 121 SEVHQEDVCSNSSRDSPQECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SE+ QED CSNSSR SPQECLSPF RP+M+QF+++RL DEHLRAKRARVENIIRGMSHSP
Sbjct: 418 SEMQQEDACSNSSRGSPQECLSPFSRPSMTQFEMERLTDEHLRAKRARVENIIRGMSHSP 597
Query: 181 RVALRGNENEREIRPQSVSPRESYRENKRKXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
V LR +N+RE Q SPRE+YRENKRK LVSA
Sbjct: 598 SVTLRAGDNDREGAAQPPSPRENYRENKRKQKLPQQQQQSFQQLVSARKEQKHEERRQLK 777
Query: 241 XXXXDMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMRSETVDAQAGDSV-GRSDNEM 299
DMQKQLRQLQE+FYQIYDSTDSENDEDGNLSED MRS+ +D +A DSV RSDNEM
Sbjct: 778 LQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSDGMDNRAHDSVPDRSDNEM 957
Query: 300 CELDPGQFIDRARALIREQEIGE-NKPKREGPKEKDQGPNSFHPEGKHLAETLKQELNTA 358
+LDPG F+DRARALIREQ + E +KPKR+G + K QGP S H EGK LAETLKQELNTA
Sbjct: 958 SDLDPGHFLDRARALIREQSMMEGDKPKRDGSRGKSQGPTSMHAEGKQLAETLKQELNTA 1137
Query: 359 MSQVVDTVVKVFSSKPSRQLPQVFPPLQIPQA-RFAVNGENHNFHTANQRLQCFGDVIIP 417
MSQVVDTVVKVF+ KP R +PQVFPPL + RFAVNGEN NFHTANQRLQCFGDVIIP
Sbjct: 1138MSQVVDTVVKVFA-KPPRPVPQVFPPLHMESPDRFAVNGENPNFHTANQRLQCFGDVIIP 1314
Query: 418 NPLDTFSSVPMPGATDQTDALPLVVRKNSSDQXXXXXXXXXXXX--XLHQSPLSATAGFS 475
NPLDTF S+ +P + DQT+ALPLVVRKNSSDQ LH PLS+T GFS
Sbjct: 1315NPLDTFGSMQVPNSNDQTEALPLVVRKNSSDQTGSLSTPGGHHHHPSLHPPPLSSTMGFS 1494
Query: 476 TSSFRHPFPLPLMAYPFQSPLGAPSASFPGKERASPESLDLTRETTSLRTKMSSHHMNXX 535
SFRHPFPLPLM YPFQSPLGAP+ +PGK+R+SPESLDL+RETTSLRTKMSS+H++
Sbjct: 1495PPSFRHPFPLPLMGYPFQSPLGAPTGPYPGKDRSSPESLDLSRETTSLRTKMSSNHLSHH 1674
Query: 536 XXXXXXXXXXXEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTR 595
EGLSLSLIKSECGDLQDMS+ISPYSGS +QEGLSPNHLKKAKLMFFYTR
Sbjct: 1675RSISPTHPGN-EGLSLSLIKSECGDLQDMSDISPYSGSTIQEGLSPNHLKKAKLMFFYTR 1851
Query: 596 YPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSIT 655
YPSSNMLK +FSDVKFNRCITSQLIKWFSNFREFYYIQMEK+ARQAINDGVT +EELS++
Sbjct: 1852YPSSNMLKMFFSDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQAINDGVTGSEELSVS 2031
Query: 656 RDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICK 715
RDCEL+RALNMHYNKANDFEVPERFLEVAQITLREFFNAI+AGKDVDPSWKKAIYKVICK
Sbjct: 2032RDCELFRALNMHYNKANDFEVPERFLEVAQITLREFFNAIVAGKDVDPSWKKAIYKVICK 2211
Query: 716 LDSEVPEIFKSPNCLQELLHE 736
LDSEVPEIFKSPNCLQELLHE
Sbjct: 2212LDSEVPEIFKSPNCLQELLHE 2274
>gb|AF063018.1|AF063018 Danio rerio homeodomain protein (Prox1) mRNA, complete cds
Length = 2500
Score = 1102 bits (2849), Expect = 0.0
Identities = 565/741 (76%), Positives = 618/741 (83%), Gaps = 5/741 (0%)
Frame = +3
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDST+LLSRQTKRRRVDIGVKRTVG AS F +A+ATF SAMNP GSEQDVE SVVQ
Sbjct: 69 MPDHDSTSLLSRQTKRRRVDIGVKRTVGQASVVFTRAKATFLSAMNPHGSEQDVECSVVQ 248
Query: 61 HADGEKPNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEK NVLRKLLKRANSYEDA+MPFPGATIISQLLKNN+ KNGG+EP+FQ SGLSSTG
Sbjct: 249 HADGEKSNVLRKLLKRANSYEDAVMPFPGATIISQLLKNNLTKNGGSEPNFQGSGLSSTG 428
Query: 121 SEVHQEDVCSNSSRDSPQECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SE+ QED CSNSSR SPQECLSPF RP+M+QF+++RL DEHLRAKRARVENIIRGMSHSP
Sbjct: 429 SEMQQEDACSNSSRGSPQECLSPFSRPSMTQFEMERLTDEHLRAKRARVENIIRGMSHSP 608
Query: 181 RVALRGNENEREIRPQSVSPRESYRENKRKXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
V LR +N+RE Q SPRE+YRENKRK LVSA
Sbjct: 609 SVTLRAGDNDREGAAQPPSPRENYRENKRKQKLPQQQQQSFQQLVSARKEQKHEERRQLK 788
Query: 241 XXXXDMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMRSETVDAQAGDSV-GRSDNEM 299
DMQKQLRQLQE+FYQIYDSTDSENDEDGNLSED MRS+ +D +A DSV RSDNEM
Sbjct: 789 LQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSDGMDNRAHDSVPDRSDNEM 968
Query: 300 CELDPGQFIDRARALIREQEIGE-NKPKREGPKEKDQGPNSFHPEGKHLAETLKQELNTA 358
+LDPG F+DRARALIREQ + E +KPKR+G + K QGP S H EGK +AETLKQELNTA
Sbjct: 969 SDLDPGHFLDRARALIREQSMMEGDKPKRDGSRGKSQGPTSMHAEGKQMAETLKQELNTA 1148
Query: 359 MSQVVDTVVKVFSSKPSRQLPQVFPPLQIPQA-RFAVNGENHNFHTANQRLQCFGDVIIP 417
MSQVVDTVVKVF+ KP R +PQVFPPL + RFAVNGEN NFHTANQRLQCFGDVIIP
Sbjct: 1149MSQVVDTVVKVFA-KPPRPVPQVFPPLHMESPDRFAVNGENPNFHTANQRLQCFGDVIIP 1325
Query: 418 NPLDTFSSVPMPGATDQTDALPLVVRKNSSDQXXXXXXXXXXXX--XLHQSPLSATAGFS 475
NPLDTF+S+ +P + DQT+ALPLVVRKNSSDQ LH PLS+T GFS
Sbjct: 1326NPLDTFASMQVPNSNDQTEALPLVVRKNSSDQTGSLSTPGGHHHHPSLHPPPLSSTMGFS 1505
Query: 476 TSSFRHPFPLPLMAYPFQSPLGAPSASFPGKERASPESLDLTRETTSLRTKMSSHHMNXX 535
SFRHPFPLPLM YPFQSPLGAP+ +PGK+R+SPESLDL+RETTSLRTKMSS+H++
Sbjct: 1506PPSFRHPFPLPLMGYPFQSPLGAPTGPYPGKDRSSPESLDLSRETTSLRTKMSSNHLSHH 1685
Query: 536 XXXXXXXXXXXEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTR 595
EGLSLSLIKSECGDLQDMS+ISPYSGS +QEGLSPNHLKKAKLMFFYTR
Sbjct: 1686RSISPTHPGN-EGLSLSLIKSECGDLQDMSDISPYSGSTIQEGLSPNHLKKAKLMFFYTR 1862
Query: 596 YPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSIT 655
YPSSNMLK +FSDVKFNRCITSQLIKWFSNFREFYYIQMEK+ARQAINDGVT +EELS++
Sbjct: 1863YPSSNMLKMFFSDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQAINDGVTGSEELSVS 2042
Query: 656 RDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICK 715
RDCEL+RALNMHYNKANDFEVPERFLEVAQITLREFFNAI+AGKDVDPSWKKAIYKVICK
Sbjct: 2043RDCELFRALNMHYNKANDFEVPERFLEVAQITLREFFNAIVAGKDVDPSWKKAIYKVICK 2222
Query: 716 LDSEVPEIFKSPNCLQELLHE 736
LDSEVPEIFKSPNCLQELLHE
Sbjct: 2223LDSEVPEIFKSPNCLQELLHE 2285
>dbj|AB008774.1|AB008774 Cynops pyrrhogaster mRNA, partial cds
Length = 2060
Score = 1092 bits (2825), Expect = 0.0
Identities = 559/689 (81%), Positives = 592/689 (85%), Gaps = 1/689 (0%)
Frame = +1
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHD T LLSRQTKRRRVDIGVKRTVGTASA FA +RA+FF+A N QGSEQDVEYSVVQ
Sbjct: 1 MPDHDCTGLLSRQTKRRRVDIGVKRTVGTASAIFANSRASFFNATNSQGSEQDVEYSVVQ 180
Query: 61 HADGEKPNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEK NVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGG EPSFQASGLSSTG
Sbjct: 181 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGNEPSFQASGLSSTG 360
Query: 121 SEVHQEDVCSNSSRDSPQECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SE+HQED+CSNSSRDSPQECLSPFGRP MSQFD++RLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 361 SEIHQEDMCSNSSRDSPQECLSPFGRPPMSQFDMERLCDEHLRAKRARVENIIRGMSHSP 540
Query: 181 RVALRGNENEREIRPQSVSPRESYRENKRKXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
V++RGNENERE PQS+SPRESYRENKRK LVSA
Sbjct: 541 NVSMRGNENEREGAPQSISPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 720
Query: 241 XXXXDMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMRSETVDAQAGDSVGRSDNEMC 300
DMQKQLRQLQE+FYQIYDSTDSEN DGNLSED M SE +D +A DSVGRSD+EM
Sbjct: 721 QQLEDMQKQLRQLQEKFYQIYDSTDSEN--DGNLSEDSMHSEIMDGRAEDSVGRSDHEMF 894
Query: 301 ELDPGQFIDRARALIREQEI-GENKPKREGPKEKDQGPNSFHPEGKHLAETLKQELNTAM 359
+LDPGQFIDRARALIREQEI ENKPKREG +EKD G NS HPEGKHLAETLKQELNTAM
Sbjct: 895 DLDPGQFIDRARALIREQEIAAENKPKREGHREKDHGHNSCHPEGKHLAETLKQELNTAM 1074
Query: 360 SQVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 419
SQVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 1075SQVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 1254
Query: 420 LDTFSSVPMPGATDQTDALPLVVRKNSSDQXXXXXXXXXXXXXLHQSPLSATAGFSTSSF 479
L+TFS++ +P + DQT+ALPLVVRKNSS+ LHQSPLSA A F++SSF
Sbjct: 1255LNTFSNMQLPNSADQTEALPLVVRKNSSEHSASGPPPGSHHPSLHQSPLSAAASFASSSF 1434
Query: 480 RHPFPLPLMAYPFQSPLGAPSASFPGKERASPESLDLTRETTSLRTKMSSHHMNXXXXXX 539
RHPFPLPLMAYPFQ+ L +P SF K+RASPESLDLTRET SLRTKMSSHH+N
Sbjct: 1435RHPFPLPLMAYPFQT-LWSPFWSFSAKDRASPESLDLTRETASLRTKMSSHHLNHHPCSP 1611
Query: 540 XXXXXXXEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 599
EGLSLSLIKSECGD+QDM+EISPYSG+AMQEGLSPNHLKKAKLMFFYTRYPSS
Sbjct: 1612AHPGSTNEGLSLSLIKSECGDMQDMAEISPYSGNAMQEGLSPNHLKKAKLMFFYTRYPSS 1791
Query: 600 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 659
NM KTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGV ST+ELSITRDCE
Sbjct: 1792NMPKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVVSTDELSITRDCE 1971
Query: 660 LYRALNMHYNKANDFEVPERFLEVAQITL 688
LYRALNMHYNKANDFEVPERFLEVAQITL
Sbjct: 1972LYRALNMHYNKANDFEVPERFLEVAQITL 2058
>emb|AL606537.10|AL606537 Human DNA sequence from clone RP11-53A1 on chromosome 1, complete
sequence [Homo sapiens]
Length = 116821
Score = 939 bits (2428), Expect = 0.0
Identities = 480/576 (83%), Positives = 500/576 (86%), Gaps = 1/576 (0%)
Frame = +3
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 57804 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 57983
Query: 61 HADGEKPNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEK NVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 57984 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 58163
Query: 121 SEVHQEDVCSNSSRDSPQECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQED+CSNSSRDSP ECLSPFGRPTMSQFD+DRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 58164 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 58343
Query: 181 RVALRGNENEREIRPQSVSPRESYRENKRKXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
VALRGNENERE+ PQSVSPRESYRENKRK LVSA
Sbjct: 58344 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 58523
Query: 241 XXXXDMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMRSETVDAQAGDSVGRSDNEMC 300
DMQKQLRQLQE+FYQIYDSTDSENDEDGNLSED MRSE +DA+A DSVGRSDNEMC
Sbjct: 58524 QQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 58703
Query: 301 ELDPGQFIDRARALIREQEIGENKPKREG-PKEKDQGPNSFHPEGKHLAETLKQELNTAM 359
ELDPGQFIDRARALIREQE+ ENKPKREG KE+D GPNS PEGKHLAETLKQELNTAM
Sbjct: 58704 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 58883
Query: 360 SQVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 419
SQVVDTVVKVFS+KPSRQ+PQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 58884 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 59063
Query: 420 LDTFSSVPMPGATDQTDALPLVVRKNSSDQXXXXXXXXXXXXXLHQSPLSATAGFSTSSF 479
LDTF +V M +TDQT+ALPLVVRKNSSDQ LHQSPLSAT GF+TS+F
Sbjct: 59064 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASGPAAGGHHQPLHQSPLSATTGFTTSTF 59243
Query: 480 RHPFPLPLMAYPFQSPLGAPSASFPGKERASPESLDLTRETTSLRTKMSSHHMNXXXXXX 539
RHPFPLPLMAYPFQSPLGAPS SF GK+RASPESLDLTR+TTSLRTKMSSHH++
Sbjct: 59244 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 59423
Query: 540 XXXXXXXEGLSLSLIKSECGDLQDMSEISPYSGSAM 575
EGLSLSLIKSECGDLQDMSEISPYSGSA+
Sbjct: 59424 AHPPSTAEGLSLSLIKSECGDLQDMSEISPYSGSAI 59531
Score = 140 bits (354), Expect = 4e-31
Identities = 66/67 (98%), Positives = 67/67 (99%)
Frame = +2
Query: 610 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 669
+FNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN
Sbjct: 72785 QFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 72964
Query: 670 KANDFEV 676
KANDFEV
Sbjct: 72965 KANDFEV 72985
Score = 127 bits (320), Expect = 3e-27
Identities = 61/62 (98%), Positives = 62/62 (99%)
Frame = +3
Query: 675 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQELL 734
+VPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQELL
Sbjct: 96912 QVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQELL 97091
Query: 735 HE 736
HE
Sbjct: 97092 HE 97097
Score = 78.6 bits (192), Expect = 2e-12
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = +1
Query: 573 SAMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK 610
S MQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK
Sbjct: 66427 SYMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK 66540
>gb|AC011700.5|AC011700 Homo sapiens Chromosome 1 BAC RP11-478J18 (Roswell Park Cancer
Institute Human BAC Library) complete sequence
Length = 154732
Score = 939 bits (2428), Expect = 0.0
Identities = 480/576 (83%), Positives = 500/576 (86%), Gaps = 1/576 (0%)
Frame = -2
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 25185 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 25006
Query: 61 HADGEKPNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEK NVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 25005 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 24826
Query: 121 SEVHQEDVCSNSSRDSPQECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQED+CSNSSRDSP ECLSPFGRPTMSQFD+DRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 24825 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 24646
Query: 181 RVALRGNENEREIRPQSVSPRESYRENKRKXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
VALRGNENERE+ PQSVSPRESYRENKRK LVSA
Sbjct: 24645 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 24466
Query: 241 XXXXDMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMRSETVDAQAGDSVGRSDNEMC 300
DMQKQLRQLQE+FYQIYDSTDSENDEDGNLSED MRSE +DA+A DSVGRSDNEMC
Sbjct: 24465 QQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 24286
Query: 301 ELDPGQFIDRARALIREQEIGENKPKREG-PKEKDQGPNSFHPEGKHLAETLKQELNTAM 359
ELDPGQFIDRARALIREQE+ ENKPKREG KE+D GPNS PEGKHLAETLKQELNTAM
Sbjct: 24285 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 24106
Query: 360 SQVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 419
SQVVDTVVKVFS+KPSRQ+PQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 24105 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 23926
Query: 420 LDTFSSVPMPGATDQTDALPLVVRKNSSDQXXXXXXXXXXXXXLHQSPLSATAGFSTSSF 479
LDTF +V M +TDQT+ALPLVVRKNSSDQ LHQSPLSAT GF+TS+F
Sbjct: 23925 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASGPAAGGHHQPLHQSPLSATTGFTTSTF 23746
Query: 480 RHPFPLPLMAYPFQSPLGAPSASFPGKERASPESLDLTRETTSLRTKMSSHHMNXXXXXX 539
RHPFPLPLMAYPFQSPLGAPS SF GK+RASPESLDLTR+TTSLRTKMSSHH++
Sbjct: 23745 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 23566
Query: 540 XXXXXXXEGLSLSLIKSECGDLQDMSEISPYSGSAM 575
EGLSLSLIKSECGDLQDMSEISPYSGSA+
Sbjct: 23565 AHPPSTAEGLSLSLIKSECGDLQDMSEISPYSGSAI 23458
Score = 140 bits (354), Expect = 4e-31
Identities = 66/67 (98%), Positives = 67/67 (99%)
Frame = -2
Query: 610 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 669
+FNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN
Sbjct: 10203 QFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 10024
Query: 670 KANDFEV 676
KANDFEV
Sbjct: 10023 KANDFEV 10003
Score = 78.6 bits (192), Expect = 2e-12
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = -3
Query: 573 SAMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK 610
S MQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK
Sbjct: 16562 SYMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK 16449
>gb|AF070733.1|AF070733 Notophthalmus viridescens transcription factor Prox1 (Prox1) gene,
partial cds
Length = 1064
Score = 557 bits (1435), Expect = e-156
Identities = 288/356 (80%), Positives = 303/356 (84%), Gaps = 1/356 (0%)
Frame = +1
Query: 41 FFSAMNPQGSEQDVEYSVVQHADGEKPNVLRKLLKRANSYEDAMMPFPGATIISQLLKNN 100
FF+AMN QGSEQDVEYSVVQHADGEK NVLRKLLKRANSYEDAMMPFPGATIISQLLKNN
Sbjct: 1 FFNAMNSQGSEQDVEYSVVQHADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNN 180
Query: 101 MNKNGGTEPSFQASGLSSTGSEVHQEDVCSNSSRDSPQECLSPFGRPTMSQFDVDRLCDE 160
MNKNGG EPSFQASGLSSTGSE+HQED+CSNSSRDSPQECLSPFGRP MSQFD++RLCDE
Sbjct: 181 MNKNGGNEPSFQASGLSSTGSEIHQEDMCSNSSRDSPQECLSPFGRPPMSQFDMERLCDE 360
Query: 161 HLRAKRARVENIIRGMSHSPRVALRGNENEREIRPQSVSPRESYRENKRKXXXXXXXXXX 220
HLRAKRARVENIIRGMSHSP V++RGNENERE PQS+SPRESYRENKRK
Sbjct: 361 HLRAKRARVENIIRGMSHSPNVSMRGNENEREGAPQSISPRESYRENKRKQKLPQQQQQS 540
Query: 221 XXXLVSAXXXXXXXXXXXXXXXXXDMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMR 280
LVSA DMQKQLRQLQE+FYQIYDSTDSEN DGNLSED M
Sbjct: 541 FQQLVSARKEQKREERRQLKQQLEDMQKQLRQLQEKFYQIYDSTDSEN--DGNLSEDSMH 714
Query: 281 SETVDAQAGDSVGRSDNEMCELDPGQFIDRARALIREQEI-GENKPKREGPKEKDQGPNS 339
SE +D +A DSVGRSD+E+ +LDPGQFIDRARALIREQEI ENKPKREG +EKD G NS
Sbjct: 715 SEIMDGRAADSVGRSDHELFDLDPGQFIDRARALIREQEIAAENKPKREGHREKDHGHNS 894
Query: 340 FHPEGKHLAETLKQELNTAMSQVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVN 395
HPEGKHLAETLKQELNTAMSQVVDTVVKVFSSKPSR LPQ FPPLQIPQARFAVN
Sbjct: 895 CHPEGKHLAETLKQELNTAMSQVVDTVVKVFSSKPSRHLPQDFPPLQIPQARFAVN 1062
>gb|AF069290.1|AF069290 Xenopus laevis Prox1 mRNA, partial cds
Length = 394
Score = 262 bits (669), Expect = 1e-67
Identities = 125/131 (95%), Positives = 128/131 (97%)
Frame = +1
Query: 581 PNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQ 640
PNH KKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQME+YARQ
Sbjct: 1 PNHFKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMERYARQ 180
Query: 641 AINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKD 700
AINDG+TSTEEL ITRDCELYRALNMHYNKAN+FEVPERFLEVAQITLRE FNAIIAGKD
Sbjct: 181 AINDGITSTEELCITRDCELYRALNMHYNKANNFEVPERFLEVAQITLRESFNAIIAGKD 360
Query: 701 VDPSWKKAIYK 711
VDPSWKKAIYK
Sbjct: 361 VDPSWKKAIYK 393
>ref|XM_063420.1| Homo sapiens similar to HOMEOBOX PROSPERO-LIKE PROTEIN PROX1 (PROX
1) (LOC122959), mRNA
Length = 429
Score = 220 bits (561), Expect = 4e-55
Identities = 101/137 (73%), Positives = 121/137 (87%)
Frame = +1
Query: 590 MFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTST 649
MFF+TRYPSSN+LK YF DV+FNRCITSQ+IKWFSNFREFYYIQMEK ARQAI+DGVT+
Sbjct: 1 MFFFTRYPSSNLLKVYFPDVQFNRCITSQMIKWFSNFREFYYIQMEKSARQAISDGVTNP 180
Query: 650 EELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAI 709
+ L + R+ EL++ALNMHYNK NDFEVP+ FLE+A +TL+EFF A+ AG+D DPSWKK I
Sbjct: 181 KMLVVLRNSELFQALNMHYNKGNDFEVPDCFLEIASLTLQEFFRAVSAGRDSDPSWKKPI 360
Query: 710 YKVICKLDSEVPEIFKS 726
YK+I KLDS++PEIFKS
Sbjct: 361 YKIISKLDSDIPEIFKS 411
>gb|AY060680.1| Drosophila melanogaster GH11848 full length cDNA
Length = 3441
Score = 211 bits (537), Expect = 2e-52
Identities = 104/181 (57%), Positives = 134/181 (73%), Gaps = 2/181 (1%)
Frame = +3
Query: 555 KSECG--DLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFN 612
+SEC D+Q ++P S + L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN
Sbjct: 1800 QSECNSADMQ-FDGMAPTSST-----LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFN 1961
Query: 613 RCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYNKAN 672
+ T+QL+KWFSNFREFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN+ N
Sbjct: 1962 KNNTAQLVKWFSNFREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNN 2141
Query: 673 DFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQE 732
EVP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE FKSPN L++
Sbjct: 2142 HIEVPQNFRFVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQ 2321
Query: 733 L 733
L
Sbjct: 2322 L 2324
>dbj|D10609.1|DROPROSA Drosophila melanogaster mRNA for prospero, complete cds
Length = 5607
Score = 211 bits (536), Expect = 3e-52
Identities = 97/155 (62%), Positives = 122/155 (78%)
Frame = +3
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYA 638
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFREFYYIQMEKYA
Sbjct: 4044 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFREFYYIQMEKYA 4223
Query: 639 RQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAG 698
RQA+ +G+ + ++L I D ELYR LN+HYN+ N EVP+ F V + TLREFF AI G
Sbjct: 4224 RQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEVPQNFRFVVESTLREFFRAIQGG 4403
Query: 699 KDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 733
KD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 4404 KDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 4508
>ref|NM_079593.1| Drosophila melanogaster prospero (pros), mRNA
Length = 5635
Score = 211 bits (536), Expect = 3e-52
Identities = 97/155 (62%), Positives = 122/155 (78%)
Frame = +1
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYA 638
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFREFYYIQMEKYA
Sbjct: 4054 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFREFYYIQMEKYA 4233
Query: 639 RQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAG 698
RQA+ +G+ + ++L I D ELYR LN+HYN+ N EVP+ F V + TLREFF AI G
Sbjct: 4234 RQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEVPQNFRFVVESTLREFFRAIQGG 4413
Query: 699 KDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 733
KD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 4414 KDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 4518
>emb|Z11743.1|DMPROSPER D. melanogaster prospero gene encoding divergent homeodomain protein
Length = 6017
Score = 211 bits (536), Expect = 3e-52
Identities = 97/155 (62%), Positives = 122/155 (78%)
Frame = +1
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYA 638
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFREFYYIQMEKYA
Sbjct: 4042 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFREFYYIQMEKYA 4221
Query: 639 RQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAG 698
RQA+ +G+ + ++L I D ELYR LN+HYN+ N EVP+ F V + TLREFF AI G
Sbjct: 4222 RQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEVPQNFRFVVESTLREFFRAIQGG 4401
Query: 699 KDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 733
KD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 4402 KDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 4506
>gb|M81389.1|DROPROS D.melanogaster Pros protein (prospero) mRNA, complete cds
Length = 6422
Score = 211 bits (536), Expect = 3e-52
Identities = 97/155 (62%), Positives = 122/155 (78%)
Frame = +2
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYA 638
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFREFYYIQMEKYA
Sbjct: 4841 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFREFYYIQMEKYA 5020
Query: 639 RQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAG 698
RQA+ +G+ + ++L I D ELYR LN+HYN+ N EVP+ F V + TLREFF AI G
Sbjct: 5021 RQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEVPQNFRFVVESTLREFFRAIQGG 5200
Query: 699 KDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 733
KD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 5201 KDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 5305
>ref|XM_081366.1| prospero, mRNA
Length = 6820
Score = 211 bits (536), Expect = 3e-52
Identities = 97/155 (62%), Positives = 122/155 (78%)
Frame = +1
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYA 638
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFREFYYIQMEKYA
Sbjct: 4843 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFREFYYIQMEKYA 5022
Query: 639 RQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAG 698
RQA+ +G+ + ++L I D ELYR LN+HYN+ N EVP+ F V + TLREFF AI G
Sbjct: 5023 RQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEVPQNFRFVVESTLREFFRAIQGG 5202
Query: 699 KDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 733
KD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 5203 KDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 5307
>ref|NM_066359.1| Caenorhabditis elegans
Length = 1761
Score = 210 bits (534), Expect = 5e-52
Identities = 96/178 (53%), Positives = 130/178 (72%)
Frame = +1
Query: 556 SECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCI 615
SECG Y G L+P HL+KAKLMFFYTRYP+SN+LK+YF D++FN+
Sbjct: 1249 SECG----------YEGGGSSSMLTPMHLRKAKLMFFYTRYPNSNLLKSYFPDIRFNKNN 1398
Query: 616 TSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYNKANDFE 675
T+QL+KWFSNFREFYY QMEK+ARQA+ +G+T ++ +++D EL++ LN HYN+ N +
Sbjct: 1399 TAQLVKWFSNFREFYYNQMEKFARQALAEGITDRNDIFVSKDSELFKVLNTHYNRNNHIK 1578
Query: 676 VPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 733
P+R + V Q TLREF +AI GKD++PSWKK IYKVI +L+ ++P+ FK PN L+ L
Sbjct: 1579 APDRLVFVVQETLREFHDAIKQGKDIEPSWKKTIYKVINRLEDQIPDFFKEPNFLERL 1752
>gb|AC006530.4|AC006530 Homo sapiens chromosome 14 clone BAC 316E14 map 14q24.3, complete
sequence
Length = 203010
Score = 114 bits (286), Expect = 3e-23
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = -2
Query: 586 KAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDG 645
K ++ T + S+ + F V+FNRCITSQ+IKWFSNFREFYYIQMEK ARQAI+DG
Sbjct: 7466 KQTVLILSTSWQMSDWMDLLF--VQFNRCITSQMIKWFSNFREFYYIQMEKSARQAISDG 7293
Query: 646 VTSTEELSITRDCELYRALNMHYNKANDFEV 676
VT+ + L + R+ EL++ALNMHYNK NDFEV
Sbjct: 7292 VTNPKMLVVLRNSELFQALNMHYNKGNDFEV 7200
Score = 81.6 bits (200), Expect = 3e-13
Identities = 35/54 (64%), Positives = 46/54 (84%)
Frame = -3
Query: 673 DFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKS 726
+ +VP+ FLE+A +TL+EFF A+ AG+D DPSWKK IYK+I KLDS++PEIFKS
Sbjct: 5713 EMQVPDCFLEIASLTLQEFFRAVSAGRDSDPSWKKPIYKIISKLDSDIPEIFKS 5552
Score = 64.7 bits (156), Expect = 3e-08
Identities = 28/36 (77%), Positives = 33/36 (90%)
Frame = -1
Query: 575 MQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK 610
+QEGL+P HLKKAKLMFF+TRYPSSN+LK YF DV+
Sbjct: 8916 IQEGLNPGHLKKAKLMFFFTRYPSSNLLKVYFPDVQ 8809
Score = 60.1 bits (144), Expect = 8e-07
Identities = 69/265 (26%), Positives = 100/265 (37%), Gaps = 7/265 (2%)
Frame = -3
Query: 124 HQEDVCSNSSRDSPQECL---SPFGR---PTMSQFDVDRLCDEHLRAKRARVENIIRGMS 177
H + C+ R S L SPF P+ S D + DEH++AKRARVE I+RGM
Sbjct: 14188 HLAEACTEGERSSSPPELDRDSPFPWSQVPSSSPTDPEWFGDEHIQAKRARVETIVRGMC 14009
Query: 178 HSPRVALRGNENEREIRPQSVSPRESYRENKRKXXXXXXXXXXXXXLVSAXXXXXXXXXX 237
SP + GN VSPR + +RK A
Sbjct: 14008 LSPNPLVPGNAQ------AGVSPRCPKKARERKRKQNLPTPQGLLMPAPAWDQGNRKGGP 13847
Query: 238 XXXXXXXDMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMRSETVDAQAGDSVGRSDN 297
+++QLR LQE Q D+ G + A+ G+ G
Sbjct: 13846 RVREQLHLLKQQLRHLQEHILQAAKPRDTAQGPGG----CGTGKGPLSAKQGNGCG---- 13691
Query: 298 EMCELDPGQFIDRARALIREQEIGENKPKREGPKEKDQGPNSFHPEGKHLA-ETLKQELN 356
R + + + G +K K ++ SF P G + E L++EL
Sbjct: 13690 -----------PRPWVVDGDHQQGTSKDLSGAEKHQESEKPSFLPSGAPASLEILRKELT 13544
Query: 357 TAMSQVVDTVVKVFSSKPSRQLPQV 381
A+SQ VD+V++ P L Q+
Sbjct: 13543 RAVSQAVDSVLQKVLLDPPGHLTQL 13469
>gb|U40760.1|FRU40760 Fugu rubripes prospero_like protein gene, partial cds
Length = 2162
Score = 105 bits (261), Expect = 2e-20
Identities = 50/82 (60%), Positives = 60/82 (72%), Gaps = 5/82 (6%)
Frame = +2
Query: 605 YFSDV-----KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 659
YF+D+ + RC+TSQLIKWFSNFREFYYIQMEK ARQA+ GVT L++ R+
Sbjct: 794 YFTDLFLVRPQLTRCVTSQLIKWFSNFREFYYIQMEKSARQAVAQGVTDVRSLAVERESG 973
Query: 660 LYRALNMHYNKANDFEVPERFL 681
L+RALN HYNKANDF+V L
Sbjct: 974 LFRALNTHYNKANDFQVTRALL 1039
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/39 (76%), Positives = 35/39 (88%)
Frame = +3
Query: 675 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVI 713
+VP+RFLEVA ITLREF++AI G+D DPSWKKAIYKVI
Sbjct: 2046 QVPQRFLEVAAITLREFYSAISTGEDRDPSWKKAIYKVI 2162
Score = 57.0 bits (136), Expect = 7e-06
Identities = 26/34 (76%), Positives = 29/34 (84%)
Frame = +1
Query: 577 EGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK 610
EGL+ NHLKKAKLMFFYTRYPSS +LK F DV+
Sbjct: 553 EGLTTNHLKKAKLMFFYTRYPSSQVLKACFHDVQ 654
>gb|L14331.1| Caenorhabditis elegans cosmid K12H4, complete sequence
Length = 38582
Score = 88.2 bits (217), Expect = 3e-15
Identities = 41/72 (56%), Positives = 51/72 (69%)
Frame = +3
Query: 556 SECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCI 615
SECG Y G L+P HL+KAKLMFFYTRYP+SN+LK+YF D++FN+
Sbjct: 27816 SECG----------YEGGGSSSMLTPMHLRKAKLMFFYTRYPNSNLLKSYFPDIRFNKNN 27965
Query: 616 TSQLIKWFSNFR 627
T+QL+KWFSNFR
Sbjct: 27966 TAQLVKWFSNFR 28001
Score = 66.2 bits (160), Expect = 1e-08
Identities = 30/59 (50%), Positives = 44/59 (73%)
Frame = +2
Query: 626 FREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVA 684
FREFYY QMEK+ARQA+ +G+T ++ +++D EL++ LN HYN+ N +V RFL V+
Sbjct: 28412 FREFYYNQMEKFARQALAEGITDRNDIFVSKDSELFKVLNTHYNRNNHIKV--RFLFVS 28582
Score = 52.4 bits (124), Expect = 2e-04
Identities = 23/40 (57%), Positives = 30/40 (74%)
Frame = +3
Query: 673 DFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKV 712
+ + P+R + V Q TLREF +AI GKD++PSWKK IYKV
Sbjct: 28599 NLQAPDRLVFVVQETLREFHDAIKQGKDIEPSWKKTIYKV 28718
>gb|AC008358.4|AC008358 Drosophila melanogaster, chromosome 3R, region 86E-86E, BAC clone
BACR48B07, complete sequence
Length = 170307
Score = 77.8 bits (190), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +3
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFR 627
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFR
Sbjct: 150726 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFR 150872
Score = 75.5 bits (184), Expect = 2e-11
Identities = 34/59 (57%), Positives = 44/59 (73%)
Frame = +2
Query: 675 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 733
+VP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 164597 QVPQNFRFVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 164773
Score = 74.7 bits (182), Expect = 3e-11
Identities = 36/67 (53%), Positives = 45/67 (66%)
Frame = +1
Query: 610 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 669
K NR +T I REFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN
Sbjct: 164158 KPNRILTKPNIPHLRICREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYN 164337
Query: 670 KANDFEV 676
+ N EV
Sbjct: 164338 RNNHIEV 164358
>gb|AF190403.1|AF190403 Drosophila melanogaster homeodomain transcription factor Prospero
(pros) gene, complete cds
Length = 9907
Score = 77.8 bits (190), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +1
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFR 627
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFR
Sbjct: 4960 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFR 5106
Score = 75.5 bits (184), Expect = 2e-11
Identities = 34/59 (57%), Positives = 44/59 (73%)
Frame = +3
Query: 675 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 733
+VP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 9714 QVPQNFRFVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 9890
Score = 74.7 bits (182), Expect = 3e-11
Identities = 36/67 (53%), Positives = 45/67 (66%)
Frame = +2
Query: 610 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 669
K NR +T I REFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN
Sbjct: 9281 KPNRILTKPNIPHLRICREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYN 9460
Query: 670 KANDFEV 676
+ N EV
Sbjct: 9461 RNNHIEV 9481
>gb|AE003691.2|AE003691 Drosophila melanogaster genomic scaffold 142000013386035 section 16 of
105, complete sequence
Length = 226773
Score = 77.8 bits (190), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +2
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFR 627
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFR
Sbjct: 81302 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFR 81448
Score = 75.5 bits (184), Expect = 2e-11
Identities = 34/59 (57%), Positives = 44/59 (73%)
Frame = +1
Query: 675 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 733
+VP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 95332 QVPQNFRFVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 95508
Score = 74.7 bits (182), Expect = 3e-11
Identities = 36/67 (53%), Positives = 45/67 (66%)
Frame = +3
Query: 610 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 669
K NR +T I REFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN
Sbjct: 94893 KPNRILTKPNIPHLRICREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYN 95072
Query: 670 KANDFEV 676
+ N EV
Sbjct: 95073 RNNHIEV 95093
>gb|AF190405.1|AF190405 Drosophila virilis homeodomain transcription factor Prospero (pros)
gene, complete cds
Length = 11422
Score = 77.8 bits (190), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +1
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFR 627
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFR
Sbjct: 5698 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFR 5844
Score = 75.1 bits (183), Expect = 2e-11
Identities = 34/59 (57%), Positives = 44/59 (73%)
Frame = +2
Query: 675 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 733
+VP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 11240 QVPQNFRFVVEQTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 11416
Score = 71.6 bits (174), Expect = 3e-10
Identities = 31/54 (57%), Positives = 40/54 (73%)
Frame = +1
Query: 623 FSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEV 676
+ REFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN+ N EV
Sbjct: 10666 YQRCREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEV 10827
>gb|AC007710.11|AC007710 Drosophila melanogaster, chromosome 3R, region 86E-86E, BAC clone
BACR05C15, complete sequence
Length = 174426
Score = 77.8 bits (190), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +3
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFR 627
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFR
Sbjct: 101247 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFR 101393
Score = 75.5 bits (184), Expect = 2e-11
Identities = 34/59 (57%), Positives = 44/59 (73%)
Frame = +2
Query: 675 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 733
+VP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 115118 QVPQNFRFVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 115294
Score = 74.7 bits (182), Expect = 3e-11
Identities = 36/67 (53%), Positives = 45/67 (66%)
Frame = +1
Query: 610 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 669
K NR +T I REFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN
Sbjct: 114679 KPNRILTKPNIPHLRICREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYN 114858
Query: 670 KANDFEV 676
+ N EV
Sbjct: 114859 RNNHIEV 114879
>gb|AC007709.4|AC007709 Drosophila melanogaster, chromosome 3R, region 86E-86E, BAC clone
BACR13P08, complete sequence
Length = 169707
Score = 75.5 bits (184), Expect = 2e-11
Identities = 34/59 (57%), Positives = 44/59 (73%)
Frame = +3
Query: 675 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 733
+VP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 11442 QVPQNFRFVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 11618
Score = 74.7 bits (182), Expect = 3e-11
Identities = 36/67 (53%), Positives = 45/67 (66%)
Frame = +2
Query: 610 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 669
K NR +T I REFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN
Sbjct: 11003 KPNRILTKPNIPHLRICREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYN 11182
Query: 670 KANDFEV 676
+ N EV
Sbjct: 11183 RNNHIEV 11203
>gb|AY040548.1| Ateles belzebuth chamek prospero-related homeobox 1 (PROX1) gene,
partial cds
Length = 162
Score = 72.8 bits (177), Expect = 1e-10
Identities = 37/53 (69%), Positives = 40/53 (74%)
Frame = +2
Query: 514 LDLTRETTSLRTKMSSHHMNXXXXXXXXXXXXXEGLSLSLIKSECGDLQDMSE 566
LDLTR+TTSLRTKMSSHH++ EGLSLSLIKSECGDLQDMSE
Sbjct: 2 LDLTRDTTSLRTKMSSHHLSHHPCSPAHPPSTAEGLSLSLIKSECGDLQDMSE 160
>ref|XM_063419.1| Homo sapiens similar to homeobox prospero-like protein (LOC122958),
mRNA
Length = 1326
Score = 60.1 bits (144), Expect = 8e-07
Identities = 69/265 (26%), Positives = 100/265 (37%), Gaps = 7/265 (2%)
Frame = +1
Query: 124 HQEDVCSNSSRDSPQECL---SPFGR---PTMSQFDVDRLCDEHLRAKRARVENIIRGMS 177
H + C+ R S L SPF P+ S D + DEH++AKRARVE I+RGM
Sbjct: 49 HLAEACTEGERSSSPPELDRDSPFPWSQVPSSSPTDPEWFGDEHIQAKRARVETIVRGMC 228
Query: 178 HSPRVALRGNENEREIRPQSVSPRESYRENKRKXXXXXXXXXXXXXLVSAXXXXXXXXXX 237
SP + GN VSPR + +RK A
Sbjct: 229 LSPNPLVPGNAQ------AGVSPRCPKKARERKRKQNLPTPQGLLMPAPAWDQGNRKGGP 390
Query: 238 XXXXXXXDMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMRSETVDAQAGDSVGRSDN 297
+++QLR LQE Q D+ G + A+ G+ G
Sbjct: 391 RVREQLHLLKQQLRHLQEHILQAAKPRDTAQGPGG----CGTGKGPLSAKQGNGCG---- 546
Query: 298 EMCELDPGQFIDRARALIREQEIGENKPKREGPKEKDQGPNSFHPEGKHLA-ETLKQELN 356
R + + + G +K K ++ SF P G + E L++EL
Sbjct: 547 -----------PRPWVVDGDHQQGTSKDLSGAEKHQESEKPSFLPSGAPASLEILRKELT 693
Query: 357 TAMSQVVDTVVKVFSSKPSRQLPQV 381
A+SQ VD+V++ P L Q+
Sbjct: 694 RAVSQAVDSVLQKVLLDPPGHLTQL 768
>dbj|AK006828.1|AK006828 Mus musculus adult male testis cDNA, RIKEN full-length enriched
library, clone:1700058C01:homolog to SIMILARITY BY
BLASTN TO AF063018, full insert sequence
Length = 1616
Score = 46.6 bits (109), Expect = 0.009
Identities = 27/64 (42%), Positives = 36/64 (56%)
Frame = +2
Query: 147 PTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSPRVALRGNENEREIRPQSVSPRESYRE 206
P+ S + D DEH++AK+ARVE I+RGM SP ++ G E S+ E RE
Sbjct: 350 PSSSLTEADWFWDEHIQAKKARVETIVRGMCLSPSSSVSGRHKE------SLRCPEKGRE 511
Query: 207 NKRK 210
KRK
Sbjct: 512 RKRK 523
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 21, 2002 12:37 AM
Number of letters in database: 601,717,568
Number of sequences in database: 1,165,784
Lambda K H
0.315 0.131 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,453,424,617
Number of Sequences: 1165784
Number of extensions: 48013506
Number of successful extensions: 239016
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 39339
Number of HSP's successfully gapped in prelim test: 12106
Number of HSP's that attempted gapping in prelim test: 164236
Number of HSP's gapped (non-prelim): 127037
length of query: 736
length of database: 1,632,228,288
effective HSP length: 143
effective length of query: 593
effective length of database: 1,465,521,176
effective search space: 869054057368
effective search space used: 869054057368
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 83 (36.6 bits)