TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(608 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,166,659 sequences; 602,804,554 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
gb|U66463.1|GGU66463 Gallus gallus membrane type-matrix met... 1187 0.0
ref|NM_005941.2| Homo sapiens matrix metalloproteinase 16 (... 1100 0.0
dbj|D83646.1|HUMMETALL Homo sapiens mRNA for metalloprotein... 1100 0.0
dbj|D85511.1|D85511 Homo sapiens mRNA for MT3-MMP, complete... 1100 0.0
ref|NM_019724.1| Mus musculus matrix metalloproteinase 16 (... 1099 0.0
dbj|AB021228.1|AB021228 Mus musculus mRNA for membrane-type... 1099 0.0
dbj|AB009303.1|AB009303 Homo sapiens mRNA for membrane-type... 1098 0.0
gb|AF282844.1|AF282844 Mus musculus matrix metalloproteinas... 1097 0.0
dbj|D85509.1|D85509 Rattus rattus mRNA for MT3-MMP, complet... 1096 0.0
ref|NM_080776.1| Rattus norvegicus matrix metalloproteinase... 978 0.0
dbj|D63886.1|D63886 Rattus sp. mRNA for MT3-MMP-del, comple... 978 0.0
gb|AF244994.1|AF244994 Scyliorhinus torazame membrane type-... 893 0.0
ref|NM_006690.2| Homo sapiens matrix metalloproteinase 24 (... 765 0.0
dbj|AB021227.1|AB021227 Homo sapiens mRNA for membrane-type... 765 0.0
gb|AF131284.1|AF131284 Homo sapiens membrane type 5 matrix ... 765 0.0
ref|XM_047216.1| Homo sapiens matrix metalloproteinase 24 (... 765 0.0
dbj|AB021226.1|AB021226 Mus musculus mRNA for membrane-type... 763 0.0
ref|NM_031757.1| Rattus norvegicus matrix metalloproteinase... 762 0.0
dbj|AB023659.1|AB023659 Rattus norvegicus mt5-mmp mRNA for ... 762 0.0
ref|NM_010808.1| Mus musculus matrix metalloproteinase 24 (... 753 0.0
emb|AJ010262.1|MMU010262 Mus musculus mRNA for membrane-typ... 753 0.0
ref|NM_022564.1| Homo sapiens matrix metalloproteinase 16 (... 726 0.0
dbj|D83647.1|HUMMETALLA Homo sapiens mRNA for metalloprotei... 726 0.0
dbj|AB047651.1|AB047651 Oryzias latipes MT5-MMP mRNA for me... 707 0.0
ref|NM_031056.1| Rattus norvegicus matrix metalloproteinase... 630 e-178
emb|X91785.1|RNMTMMPGN R.norvegicus mRNA for membrane-type ... 630 e-178
gb|U54984.1|MMU54984 Mus musculus membrane-type matrix meta... 629 e-178
ref|NM_004995.2| Homo sapiens matrix metalloproteinase 14 (... 627 e-177
gb|U41078.1|HSU41078 Human membrane-type matrix metalloprot... 627 e-177
emb|Z48481.1|HSMMPM1 H.sapiens mRNA for membrane-type matri... 627 e-177
emb|X83535.1|HSMTMMP29 Homo sapiens mRNA for membrane-type ... 627 e-177
dbj|AB010921.1|AB010921 Capra hircus MT1MMP mRNA for Membra... 627 e-177
emb|X83537.1|RNMTMMP Rattus norvegicus mRNA for membrane-ty... 626 e-177
dbj|D26512.1|HUMMTMMP Human mRNA for membrane type matrix m... 626 e-177
emb|X90925.1|HSMTMMPPR H.sapiens mRNA for MT-MMP protein 625 e-177
gb|AF067419.1|AF067419 Sus scrofa membrane-type 1 matrix me... 622 e-176
gb|AF290429.1|AF290429 Bos taurus membrane-type matrix meta... 622 e-176
gb|AF306662.2|AF306662 Cricetulus griseus matrix metallopro... 621 e-176
gb|BC006412.1|BC006412 Homo sapiens, matrix metalloproteina... 617 e-174
ref|NM_002428.1| Homo sapiens matrix metalloproteinase 15 (... 617 e-174
emb|Z48482.1|HSMMPM2 H.sapiens mRNA for membrane-type matri... 617 e-174
ref|NM_008609.1| Mus musculus matrix metalloproteinase 15 (... 615 e-174
dbj|D86332.1|D86332 Mus musculus mRNA for membrane type-2 m... 615 e-174
gb|U73940.1|OCU73940 Oryctolagus cuniculus membane-type 1 m... 614 e-174
ref|NM_008608.1| Mus musculus matrix metalloproteinase 14 (... 614 e-174
emb|X83536.2|MMMTMMP Mus musculus mRNA for membrane-type ma... 614 e-174
gb|U83918.1|OCU83918 Oryctolagus cuniculus membrane type 1 ... 611 e-173
dbj|AB047650.1|AB047650 Oryzias latipes MT5-MMP-del mRNA fo... 607 e-172
dbj|D86331.1|D86331 Human MT2-MMP gene for matrix metallopr... 572 e-161
dbj|D85510.1|D85510 Homo sapiens mRNA for SMCP-2, partial cds 502 e-140
gb|AF267160.1|AF267160 Ovis aries membrane type-1 metallopr... 335 8e-90
emb|AJ010731.1|MAJ10731 Mus musculus mRNA for membrane-type... 318 1e-84
ref|NM_011846.1| Mus musculus matrix metalloproteinase 17 (... 318 1e-84
dbj|AB021224.1|AB021224 Mus musculus mRNA for membrane-type... 318 1e-84
gb|AF185270.1|AF185270 Homo sapiens leukolysin (MMP25) mRNA... 317 2e-84
gb|AF145442.2|AF145442 Homo sapiens leukolysin mRNA, comple... 317 2e-84
ref|NM_022468.2| Homo sapiens matrix metalloproteinase 25 (... 317 2e-84
emb|AJ272137.1|HSA272137 Homo sapiens mRNA for membrane typ... 317 2e-84
emb|AJ239053.1|HSA239053 Homo sapiens mRNA for matrix metal... 317 2e-84
ref|NM_022718.1| Homo sapiens matrix metalloproteinase 25 (... 317 2e-84
dbj|AB042328.1|AB042328 Homo sapiens mt6-mmp mRNA for membr... 313 2e-83
emb|X89576.1|HSMMP17 Homo sapiens mRNA for putative MT2-MMP... 304 1e-80
ref|NM_016155.2| Homo sapiens matrix metalloproteinase 17 (... 304 1e-80
dbj|AB021225.2| Homo sapiens mt4-mmp mRNA for membrane-type... 304 1e-80
ref|NM_002424.1| Homo sapiens matrix metalloproteinase 8 (n... 292 6e-77
gb|J05556.1|HUMCLGNA Homo sapiens collagenase mRNA, complet... 292 6e-77
gb|U88652.1|OCU88652 Oryctolagus cuniculus macrophage metal... 288 8e-76
dbj|AB006779.1|AB006779 Oryctolagus cuniculus mRNA for matr... 288 1e-75
gb|AF144758.1|AF144758 Bos taurus MT1-MMP protein (MMP-14) ... 287 2e-75
ref|NM_008611.1| Mus musculus matrix metalloproteinase 8 (M... 284 2e-74
gb|U96696.1|MMU96696 Mus musculus neutrophil collagenase MN... 284 2e-74
ref|NM_079128.1| Drosophila melanogaster Matrix metalloprot... 282 8e-74
gb|AF271666.1|AF271666 Drosophila melanogaster matrix metal... 282 8e-74
ref|XM_080576.1| Matrix metalloproteinase 1, mRNA 282 8e-74
emb|Y13342.1|MMY13342 Mus musculus mRNA for collagenase-2 282 8e-74
dbj|AK020292.1|AK020292 Mus musculus adult male cecum cDNA,... 281 1e-73
ref|NM_019471.1| Mus musculus matrix metalloproteinase 10 (... 281 1e-73
emb|Y13185.1|MMMMP10 Mus musculus mRNA for stromelysin-2 281 1e-73
dbj|D82053.1|D82053 Cynops pyrrhogaster mRNA for stromelysi... 281 1e-73
gb|AF034087.1|AF034087 Equus caballus matrix metalloprotein... 281 1e-73
ref|NM_022221.1| Rattus norvegicus neutrophil collagenease ... 280 4e-73
emb|AJ007288.1|RNO7288 Rattus norvegicus mRNA for neutrophi... 280 4e-73
ref|NM_002426.1| Homo sapiens matrix metalloproteinase 12 (... 279 7e-73
gb|L23808.1|HUMHME Human metalloproteinase (HME) mRNA, comp... 279 7e-73
emb|X05083.1|RNTRAN2R RAT mRNA for oncogene-induced transin-2 278 1e-72
gb|M65253.1|RATTAP34A Rat transformation-associated protein... 278 1e-72
gb|AF148882.1|AF148882 Equus caballus matrix metalloprotein... 277 2e-72
gb|AF201729.1|AF201729 Canis familiaris matrix metalloprote... 276 4e-72
emb|X05232.1|HSSTROMR Human mRNA for stromelysin 275 9e-72
ref|NM_002422.2| Homo sapiens matrix metalloproteinase 3 (s... 275 9e-72
gb|J03209.1|HUMMMP3A Human matrix metalloproteinase-3 (MMP-... 275 9e-72
emb|X75308.1|HSRNAC3 H.sapiens mRNA for collagenase 3 275 1e-71
ref|NM_002427.2| Homo sapiens matrix metalloproteinase 13 (... 275 1e-71
emb|X81334.1|HSCOLLAG3 H.sapiens mRNA for collagenase-3 pro... 275 1e-71
emb|Z27093.1|XLSTROL3 X.laevis mRNA for stromelysin-3 274 2e-71
gb|U41824.1|XLU41824 Xenopus laevis collagenase-3 (gene A) ... 274 2e-71
gb|L49412.1|XELMMP1G Xenopus laevis collagenase 3 (MMP-13) ... 273 3e-71
gb|AF059201.1|AF059201 Oryctolagus cuniculus collagenase-3 ... 273 4e-71
dbj|D82055.1|D82055 Cynops pyrrhogaster mRNA for collagenas... 273 4e-71
emb|X54925.1|HSCOLL1 H.sapiens mRNA for type I interstitial... 272 6e-71
ref|NM_002421.2| Homo sapiens matrix metalloproteinase 1 (i... 272 6e-71
dbj|AK024818.1|AK024818 Homo sapiens cDNA: FLJ21165 fis, cl... 272 6e-71
gb|BC013875.1|BC013875 Homo sapiens, Similar to matrix meta... 272 6e-71
gb|M25664.1|RABSTROM Rabbit metalloproteinase synovial cell... 271 1e-70
emb|X54724.1|SSMMP1 Porcine mmp1 mRNA for matrix metallopro... 271 1e-70
gb|M60616.1|RATCOL Rat collagenase (UMRCase) mRNA, 3' end 271 2e-70
gb|AE003464.1|AE003464 Drosophila melanogaster genomic scaf... 204 3e-70
gb|AC099037.1| Drosophila melanogaster, chromosome 2R, regi... 204 3e-70
gb|AC007925.5|AC007925 Drosophila melanogaster, chromosome ... 204 3e-70
gb|AC007581.5|AC007581 Drosophila melanogaster, chromosome ... 204 3e-70
emb|X05231.1|HSCOLLR Human mRNA for collagenase (E.C. 3.4.24) 270 3e-70
gb|M13509.1|HUMCN2 Human skin collagenase mRNA, complete cds 270 4e-70
gb|BC006725.1|BC006725 Mus musculus, matrix metalloproteina... 268 9e-70
gb|L76275.1|XELCOLL Xenopus laevis collagenase 4 precursor ... 268 9e-70
emb|X66402.1|MMSTLY M.musculus mRNA for stromelysin 1 268 9e-70
ref|NM_010809.1| Mus musculus matrix metalloproteinase 3 (M... 268 9e-70
emb|X63162.1|MMTRANS1 M.musculus mRNA for transin-1 268 9e-70
gb|AF072685.1|AF072685 Bos taurus matrix metalloproteinase ... 268 2e-69
gb|AF144760.1|AF144760 Bos taurus MT3-MMP protein (MMP-16) ... 268 2e-69
gb|BC002591.1|BC002591 Homo sapiens, matrix metalloproteina... 266 3e-69
gb|AF062392.1|AF062392 Gallus gallus matrix metalloproteina... 265 8e-69
ref|XM_058069.2| Homo sapiens matrix metalloproteinase 12 (... 145 8e-69
ref|XM_040728.1| Homo sapiens matrix metalloproteinase 10 (... 264 2e-68
ref|NM_002425.1| Homo sapiens matrix metalloproteinase 10 (... 264 2e-68
emb|X07820.1|HSSTROM2 Human mRNA for metalloproteinase stro... 264 2e-68
emb|X58256.1|BTCLG Bovine CLG mRNA for collagenase 263 4e-68
ref|NM_008607.1| Mus musculus matrix metalloproteinase 13 (... 262 8e-68
emb|X66473.1|MMPCOLLAG M.musculus mRNA for (pro)collagenase 262 8e-68
gb|AF009922.1|AF009922 Bos taurus enamel metalloproteinase ... 262 8e-68
ref|XM_009873.3| Homo sapiens matrix metalloproteinase 11 (... 261 1e-67
emb|X57766.1|HSSTROL3 Human stromelysin-3 mRNA 261 1e-67
ref|NM_005940.2| Homo sapiens matrix metalloproteinase 11 (... 261 1e-67
emb|X02601.1|RNURFR1 Rat mRNA for 53 kD polypeptide induced... 260 3e-67
dbj|D82054.1|D82054 Cynops pyrrhogaster mRNA for stromelysi... 259 5e-67
dbj|AB043536.1|AB043536 Oncorhynchus mykiss mmp mRNA for ma... 258 9e-67
gb|U54825.1|SSU54825 Sus scrofa matrix metalloproteinase mR... 256 5e-66
ref|NM_008606.1| Mus musculus matrix metalloproteinase 11 (... 256 5e-66
emb|Z12604.1|MMSTRMLY3 M.musculus mRNA for stromelysin-3 256 5e-66
ref|NM_013903.1| Mus musculus matrix metalloproteinase 20 (... 256 6e-66
gb|AF155933.1|AF155933 Mus musculus matrix metalloproteinas... 256 6e-66
gb|AF281673.1|AF281673 Tupaia belangeri matrix metalloprote... 255 8e-66
emb|Y12779.1|HSENAMELY H.sapiens mRNA for enamelysin 255 8e-66
ref|NM_004771.2| Homo sapiens matrix metalloproteinase 20 (... 255 8e-66
gb|U62529.1|ECU62529 Equus caballus matrix metalloproteinas... 255 1e-65
gb|BC019135.1|BC019135 Mus musculus, Similar to matrix meta... 254 2e-65
dbj|AB028240.1|AB028240 Salmo salar mRNA for matrix metallo... 253 3e-65
ref|NM_032006.1| Mus musculus collagenase-like A (Mcola-pen... 253 5e-65
emb|AJ278462.1|MMU278462 Mus musculus mRNA for putative mat... 253 5e-65
ref|NM_012980.1| Rattus norvegicus Matrix metalloproteinase... 250 3e-64
gb|U46034.1|RNU46034 Rattus norvegicus stromelysin 3 mRNA, ... 250 3e-64
ref|NM_008605.1| Mus musculus matrix metalloproteinase 12 (... 249 7e-64
gb|M82831.1|MUSMETELAS Mus musculus macrophage metalloelast... 249 7e-64
ref|NM_053963.1| Rattus norvegicus matrix metalloproteinase... 248 1e-63
emb|X98517.1|RNMME R.norvegicus mRNA for macrophage metallo... 248 1e-63
gb|AF070478.1|AF070478 Gallus gallus matrix metalloproteina... 247 2e-63
ref|NM_022122.1| Homo sapiens matrix metalloproteinase 27 (... 246 5e-63
gb|AF195192.1|AF195192 Homo sapiens matrix metalloprotease ... 246 5e-63
ref|NM_032007.1| Mus musculus collagenase-like B (Mcolb-pen... 237 2e-60
emb|AJ278461.1|MMU278461 Mus musculus mRNA for putative mat... 237 2e-60
gb|U37791.1|HSU37791 Homo sapiens clone rasi-1 matrix metal... 224 3e-56
ref|NM_002429.2| Homo sapiens matrix metalloproteinase 19 (... 224 3e-56
emb|X92521.1|HSMMP19 H.sapiens mRNA for MMP-19 protein 224 3e-56
gb|U38321.1|HSU38321 Homo sapiens clone rasi-11 matrix meta... 224 3e-56
emb|Y08622.1|HSRMMP18 H.sapiens mRNA for matrix metalloprot... 223 3e-56
gb|AC090980.5| Homo sapiens chromosome 8, clone RP11-433O22... 223 4e-56
ref|NM_021412.1| Mus musculus matrix metalloproteinase 19 (... 221 1e-55
gb|AF155221.1|AF155221 Mus musculus matrix metalloproteinas... 221 1e-55
gb|AF162446.1|AF162446 Mus musculus matrix metalloproteinas... 221 1e-55
gb|AF153199.1|AF153199 Mus musculus matrix metalloproteinas... 221 1e-55
gb|AF315683.1|AF315683 Homo sapiens matrix metalloproteinas... 215 1e-53
ref|NM_024302.2| Homo sapiens matrix metalloproteinase 28 (... 215 1e-53
gb|AF219624.1|AF219624 Homo sapiens matrix metalloproteinas... 215 1e-53
gb|AF330002.1|AF330002 Homo sapiens matrix metalloprotease ... 215 1e-53
gb|AF162688.1|AF162688 Hydra vulgaris matrix metalloprotein... 209 8e-52
gb|AF354290.1|AF354290 Xenopus laevis matrix metalloprotein... 207 2e-51
ref|NM_032950.1| Homo sapiens matrix metalloproteinase 28 (... 202 6e-50
gb|BC002631.1|BC002631 Homo sapiens, clone MGC:4164 IMAGE:3... 202 6e-50
ref|XM_083968.1| Homo sapiens matrix metalloproteinase 28 (... 167 9e-49
emb|X53598.1|PLHE6R P. lividus mRNA for hatching enzyme 191 1e-46
emb|AL121753.30|HSDJ614O4 Human DNA sequence from clone RP4... 188 2e-45
gb|U65656.1|RNU65656 Rattus norvegicus gelatinase A mRNA, c... 186 4e-45
gb|AY037943.1| Xenopus laevis matrix metalloproteinase mRNA... 186 6e-45
ref|NM_008610.1| Mus musculus matrix metalloproteinase 2 (M... 184 2e-44
gb|M84324.1|MUSIVCOL Mus musculus type IV collagenase mRNA,... 184 2e-44
dbj|AB021698.1|AB021698 Oncorhynchus mykiss mRNA for matrix... 184 2e-44
ref|NM_031054.1| Rattus norvegicus matrix metalloproteinase... 184 2e-44
emb|X71466.1|RNCOLL R. Norvegicus mRNA for 72 KDa type IV c... 184 2e-44
dbj|AB031323.1|AB031323 Sus scrofa mRNA for matrilysin, com... 184 3e-44
gb|AF290428.1|AF290428 Bos taurus matrix metalloprotease 2 ... 184 3e-44
dbj|AB033754.2|AB033754 Oryzias latipes gel-a mRNA for gela... 182 6e-44
dbj|D63579.1|RABMM2 Oryctolagus cuniculus mRNA for matrix m... 182 1e-43
gb|AF177217.1|AF177217 Canis familiaris matrix metalloprote... 182 1e-43
gb|J03210.1|HUMCN4GEL Human collagenase type IV mRNA, 3' end 181 2e-43
ref|XM_012503.2| Homo sapiens matrix metalloproteinase 2 (g... 181 2e-43
ref|NM_004530.1| Homo sapiens matrix metalloproteinase 2 (g... 181 2e-43
gb|BC002576.1|BC002576 Homo sapiens, matrix metalloproteina... 181 2e-43
gb|U07775.1|GGU07775 Gallus gallus prepro-72kDa matrix meta... 179 7e-43
gb|BC003635.1|BC003635 Homo sapiens, matrix metalloproteina... 178 1e-42
ref|NM_002423.2| Homo sapiens matrix metalloproteinase 7 (m... 178 2e-42
emb|X07819.1|HSPUMP1 Human pump-1 mRNA homolog. to metallop... 178 2e-42
emb|Z11887.1|HSPUMP1G H.sapiens PUMP-1 gene encoding PUMP 178 2e-42
gb|AF295805.1|AF295805 Sus scrofa gelatinase A (MMP-2) mRNA... 175 1e-41
dbj|AB000719.1|AB000719 Hemicentrotus pulcherrimus mRNA for... 174 2e-41
ref|NM_012864.1| Rattus norvegicus Matrix metalloproteinase... 173 4e-41
gb|L24374.1|RATMPMM Rattus norvegicus matrilysin (MMP-7) mR... 173 4e-41
dbj|AB057752.1|AB057752 Paralichthys olivaceus MMP2 mRNA fo... 170 3e-40
gb|AF144759.1|AF144759 Bos taurus MT2-MMP protein (MMP-15) ... 170 3e-40
ref|NM_010810.1| Mus musculus matrix metalloproteinase 7 (M... 169 6e-40
gb|L36244.1|MUSMAT Mus musculus metalloproteinase matrilysi... 169 6e-40
gb|U04444.1|FDU04444 Felis domesticus PUMP-1 mRNA, partial cds 167 2e-39
ref|NM_071389.1| Caenorhabditis elegans 166 8e-39
dbj|AB007815.1|AB007815 Caenorhabditis elegans mRNA for mat... 166 8e-39
ref|XM_017384.1| Homo sapiens matrix metalloproteinase 7 (m... 135 8e-38
gb|AF097638.1|AF097638 Canis familiaris matrix metalloprote... 161 2e-37
gb|AF267159.1|AF267159 Ovis aries gelatinase A mRNA, partia... 157 3e-36
gb|AF134714.1|AF134714 Bos taurus MMP-1 protein mRNA, parti... 153 4e-35
gb|AF156935.1|AF156935 Synthetic construct stromelysin cata... 152 1e-34
gb|AF149850.1|AF149850 Canis familiaris matrix metalloprote... 150 5e-34
emb|AL133448.4|CNS01DV2 Human chromosome 14 DNA sequence **... 147 2e-33
emb|AL135998.6|CNS01DVO Human chromosome 14 DNA sequence BA... 147 2e-33
gb|AF248646.1|AF248646 Homo sapiens matrix metalloproteinas... 142 1e-31
ref|XM_051704.1| Homo sapiens matrix metalloproteinase 26 (... 142 1e-31
ref|NM_021801.2| Homo sapiens matrix metalloproteinase 26 (... 142 1e-31
gb|AF022427.1|MM14MMP4 Mus musculus matrix metalloproteinas... 142 1e-31
gb|AF291664.1|AF291664 Homo sapiens matrix metalloproteinas... 142 1e-31
emb|AJ251531.1|HSA251531 Homo sapiens mRNA for matrilysin-2... 142 1e-31
gb|AF230354.1|AF230354 Homo sapiens matrix metalloproteinas... 141 2e-31
gb|U63725.1|GMU63725 Glycine max metalloproteinase mRNA, co... 139 1e-30
emb|X76537.1|MMSROM2 Mus musculus mRNA for stromelysin-2 138 1e-30
dbj|AB031324.1|AB031324 Sus scrofa mRNA for matrilysin-rela... 138 2e-30
dbj|AB057753.1|AB057753 Paralichthys olivaceus MMP9 mRNA fo... 137 4e-30
dbj|AB007817.1|AB007817 Caenorhabditis elegans mRNA for mat... 137 4e-30
gb|AF072455.1|AF072455 Xenopus laevis gelatinase B (MMP-9) ... 136 7e-30
gb|AF222690.1|AF222690 Gallus gallus 75 kDa gelatinase mRNA... 136 7e-30
dbj|AB057407.1|AB057407 Cyprinus carpio mRNA for matrix met... 135 9e-30
dbj|D82052.1|D82052 Cynops pyrrhogaster mRNA for gelatinase... 135 1e-29
dbj|AB033755.1|AB033755 Oryzias latipes gel-b mRNA for gela... 135 2e-29
gb|S75623.1|S75623 collagenase [Rana catesbeiana=bullfrags,... 135 2e-29
ref|NM_065193.1| protease 133 4e-29
ref|NM_022791.1| Homo sapiens matrix metalloproteinase 19 (... 133 4e-29
gb|U38431.1|HSU38431 Human clone rasi-6 matrix metalloprote... 133 4e-29
dbj|AB007816.1|AB007816 Caenorhabditis elegans mRNA for mat... 128 1e-27
ref|NM_130068.1| Arabidopsis thaliana chromosome 2 CHR2v12... 128 2e-27
gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II s... 128 2e-27
gb|BC006093.1|BC006093 Homo sapiens, matrix metalloproteina... 127 4e-27
ref|NM_004994.1| Homo sapiens matrix metalloproteinase 9 (g... 127 4e-27
gb|J05070.1|HUM4COLA Human type IV collagenase mRNA, comple... 127 4e-27
dbj|AB044413.1|AB044413 Sus scrofa MMP-3 mRNA for matrix me... 127 4e-27
gb|U82541.1|XLU82541 Xenopus laevis matrix metalloproteinas... 127 4e-27
gb|AC005966.2|T2K10 Arabidopsis thaliana chromosome 1 BAC T... 125 9e-27
gb|AC007258.3|AC007258 Arabidopsis thaliana chromosome I BA... 125 9e-27
ref|NM_104689.1| Arabidopsis thaliana chromosome 1 CHR1v12... 125 9e-27
ref|XM_061185.1| Homo sapiens similar to matrix metalloprot... 125 9e-27
ref|NM_065195.1| Caenorhabditis elegans 125 2e-26
emb|X78324.1|BTMMP9 B.taurus bmmp9 mRNA for matrix metallop... 125 2e-26
gb|U89842.1|CFU89842 Canis familiaris gelatinase B mRNA, pa... 124 3e-26
ref|NM_105685.1| Arabidopsis thaliana chromosome 1 CHR1v12... 124 4e-26
gb|AC002062.1|F20P5 Sequence of BAC F20P5 from Arabidopsis ... 124 4e-26
gb|AF169244.1|AF169244 Canis familiaris matrix metalloprote... 124 4e-26
dbj|AB006421.3|AB006421 Canis familiaris mRNA for matrix me... 123 5e-26
dbj|AB043996.1|AB043996 Bos taurus bmmp-9 mRNA for MMP-9, p... 123 5e-26
dbj|D26514.1|RABMM9 Rabbit mRNA for matrix metalloproteinas... 123 6e-26
gb|AF022971.1|AF022971 Caenorhabditis elegans cosmid C31B8,... 123 6e-26
gb|AF062640.1|AF062640 Arabidopsis thaliana metalloproteina... 122 8e-26
gb|U36476.1|RNU36476 Rattus norvegicus 92-kDa type IV colla... 122 1e-25
ref|NM_031055.1| Rattus norvegicus matrix metalloproteinase... 122 1e-25
gb|U24441.1|RNU24441 Rattus norvegicus gelatinase B (GelB) ... 122 1e-25
gb|S67830.1|S67830 type IV collagenase=matrix metalloprotei... 121 2e-25
dbj|D12712.1|MUSGEL Mouse mRNA for gelatinase, complete cds 121 2e-25
ref|NM_013599.1| Mus musculus matrix metalloproteinase 9 (M... 121 2e-25
dbj|AK004651.1|AK004651 Mus musculus adult male lung cDNA, ... 121 2e-25
emb|Z27231.1|MMCLG4B M.musculus mRNA for type IV collagenas... 121 2e-25
dbj|AB054185.1|AB054185 Cynops pyrrhogaster mRNA for matrix... 121 2e-25
emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosom... 120 3e-25
emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ... 120 3e-25
ref|NM_117765.1| Arabidopsis thaliana chromosome 4 CHR4v12... 120 3e-25
ref|NM_077711.1| matrix metalloprotease 120 3e-25
ref|NM_102260.1| Arabidopsis thaliana chromosome 1 CHR1v12... 120 4e-25
gb|AC002396.1|AC002396 Arabidopsis thaliana chromosome I BA... 120 4e-25
gb|AF270937.1|AF270937 Plutella xylostella granulovirus gen... 118 2e-24
ref|XM_055373.2| Homo sapiens hypothetical gene LOC115169 (... 117 4e-24
gb|AF135232.1|AF135232 Bos taurus MMP-3 protein mRNA, parti... 115 1e-23
gb|AF162221.1|AF162221 Xestia c-nigrum granulovirus genome,... 115 1e-23
emb|AJ133371.1|CSA133371 Cucumis sativus mRNA for matrix me... 114 2e-23
gb|AF011391.1|AF011391 Cavia porcellus collagenase-3 mRNA, ... 112 1e-22
dbj|AB043994.1|AB043994 Bos taurus bmmp-2 mRNA for MMP-2, p... 109 7e-22
ref|NM_004142.1| Homo sapiens matrix metalloproteinase-like... 109 9e-22
emb|AJ003144.1|HSAJ03144 Homo sapiens mRNA for metalloprote... 109 9e-22
gb|AC069300.7|AC069300 Oryza sativa chromosome 10 BAC OSJNB... 109 9e-22
gb|AF201725.1|AF201725 Sus scrofa stromelysin (mmp3) mRNA, ... 108 1e-21
gb|AF303741.1|AF303741 Chilo iridescent virus complete genome 108 2e-21
gb|AF099191.1|AF099191 Caenorhabditis elegans MMP-like prot... 108 2e-21
gb|AF030866.1|AF030866 Mesocricetus auratus collagenase-3 m... 108 2e-21
ref|NM_066198.1| zinc protease 108 2e-21
gb|U53466.2|U53466 Cydia pomonella granulovirus, complete g... 105 1e-20
gb|BC013118.1|BC013118 Homo sapiens, Similar to matrix meta... 103 6e-20
gb|AF260254.1|AF260254 Mesocricetus auratus matrix metallop... 102 8e-20
emb|AJ243311.1|ECA243311 Equus caballus mRNA for matrix met... 102 1e-19
emb|AJ010314.1|EAJ10314 Equus caballus mRNA for matrix meta... 102 1e-19
emb|X72795.1|MMMMP9B M.musculus mRNA for gelatinase B 101 2e-19
gb|AF022428.1|MM14MMP5 Mus musculus matrix metalloproteinas... 100 3e-19
ref|NM_022792.1| Homo sapiens matrix metalloproteinase 19 (... 100 4e-19
gb|U38322.1|HSU38322 Homo sapiens clone rasi-9 matrix metal... 100 4e-19
gb|AF150057.1|AF150057 Ambystoma mexicanum matrix metallopr... 100 4e-19
gb|AF135235.1|AF135235 Bos taurus MMP-13 protein mRNA, part... 100 7e-19
gb|AF135231.1|AF135231 Bos taurus MMP-2 protein mRNA, parti... 97 5e-18
gb|AF111100.1|AF111100 Canis familiaris matrix metalloprote... 97 6e-18
gb|AF150058.1|AF150058 Ambystoma mexicanum matrix metallopr... 94 4e-17
gb|AF202971.1|AF202971 Sus scrofa matrix metalloproteinase ... 94 4e-17
ref|NM_004659.1| Homo sapiens matrix metalloproteinase 23A ... 94 4e-17
gb|AF056200.1|AF056200 Homo sapiens metalloprotease mmp21/2... 94 4e-17
gb|AC005302.70| Mus musculus chromosome 10 clone rp21-481n4... 94 5e-17
ref|XM_084061.1| Homo sapiens matrix metalloproteinase 23B ... 94 5e-17
ref|NM_053606.1| Rattus norvegicus Matrix metalloproteinase... 94 5e-17
dbj|AB010960.1|AB010960 Rattus norvegicus mRNA for MIFR, co... 94 5e-17
ref|NM_006983.1| Homo sapiens matrix metalloproteinase 23B ... 94 5e-17
emb|AJ005256.1|HSAJ5256 Homo sapiens mRNA for MMP-23 94 5e-17
dbj|AB010961.1|AB010961 Homo sapiens mRNA for MIFR-1, compl... 94 5e-17
gb|AF150056.1|AF150056 Ambystoma mexicanum matrix metallopr... 93 7e-17
gb|AF135233.1|AF135233 Bos taurus MMP-7 protein mRNA, parti... 93 9e-17
gb|AE003832.2|AE003832 Drosophila melanogaster genomic scaf... 86 2e-16
gb|AC005894.1|AC005894 Drosophila melanogaster, chromosome ... 86 2e-16
gb|AC099009.1| Drosophila melanogaster, chromosome 2R, regi... 86 2e-16
gb|AC006472.2|AC006472 Drosophila melanogaster, chromosome ... 86 2e-16
gb|AF069642.1|AF069642 Bos taurus matrix metalloproteinase ... 91 3e-16
ref|NM_011985.1| Mus musculus matrix metalloproteinase 23 (... 91 3e-16
gb|AF085742.1|AF085742 Mus musculus CAMP metalloproteinase ... 91 3e-16
gb|AF055671.1|AF055671 Mesocricetus auratus collagenase 2 (... 90 6e-16
gb|AF069644.1|AF069644 Bos taurus matrix metalloproteinase ... 90 7e-16
gb|AF069641.1|AF069641 Sus scrofa matrix metalloproteinase ... 89 1e-15
gb|AF069643.1|AF069643 Sus scrofa matrix metalloproteinase ... 89 1e-15
gb|AF150055.1|AF150055 Ambystoma mexicanum matrix metallopr... 89 1e-15
gb|AF055670.1|AF055670 Cavia porcellus collagenase 2 (MMP-8... 87 6e-15
dbj|AP000647.4|AP000647 Homo sapiens genomic DNA, chromosom... 85 2e-14
dbj|AP000789.4|AP000789 Homo sapiens genomic DNA, chromosom... 84 3e-14
gb|AF022432.1|MM14MMP9 Mus musculus matrix metalloproteinas... 84 4e-14
gb|AF267157.1|AF267157 Ovis aries MMP-13 mRNA, partial cds 84 5e-14
gb|AF145123.1|AF145123 Ambystoma mexicanum matrix metallopr... 82 1e-13
gb|AF267158.1|AF267158 Ovis aries matrilysin mRNA, partial cds 82 2e-13
gb|U78045.1|HSU78045 Human collagenase and stromelysin gene... 82 2e-13
gb|AF277294.1|AF277294 Gnathostoma spinigerum matrix metall... 82 2e-13
gb|AF267156.1|AF267156 Ovis aries interstitial collagenase ... 80 6e-13
gb|AF022430.1|MM14MMP7 Mus musculus matrix metalloproteinas... 79 1e-12
gb|AC006237.1|AC006237 Homo sapiens chromosome 17, clone hR... 79 2e-12
gb|AF123396.1|AF123396 Canis familiaris gelatinase B mRNA, ... 77 4e-12
dbj|AP000619.4|AP000619 Homo sapiens genomic DNA, chromosom... 77 5e-12
gb|AC092352.2| Homo sapiens chromosome 16 clone RP11-2M17, ... 76 8e-12
gb|AC007336.5|AC007336 Homo sapiens chromosome 16 clone RP1... 76 8e-12
gb|M55588.1|HUMCLG4Q08 Human collagenase type IV (CLG4) gen... 76 8e-12
emb|AJ003147.1|HSAJ03147 Homo sapiens complete genomic sequ... 75 1e-11
dbj|AP000851.4|AP000851 Homo sapiens genomic DNA, chromosom... 75 1e-11
emb|X03168.1|HSSPROT Human mRNA for S-protein 74 5e-11
gb|M17821.1|RABCN2 Oryctolagus cuniculus collagenase-1 prec... 74 5e-11
ref|XM_061993.1| Homo sapiens similar to INTERSTITIAL COLLA... 73 7e-11
gb|M55442.1|RABGP66 O.cuniculus domesticus vitronectin (gly... 73 7e-11
gb|AY057902.1| Glycine max matrix metalloproteinase MMP2 (M... 72 1e-10
emb|AJ006411.1|OMY6411 Oncorhynchus mykiss mRNA for collage... 72 2e-10
dbj|AK011736.1|AK011736 Mus musculus 10 days embryo whole b... 72 2e-10
gb|BC018521.1|BC018521 Mus musculus, vitronectin, clone MGC... 72 2e-10
gb|AF156951.1|F156947S05 Mus musculus matrix metalloprotein... 72 2e-10
gb|M77123.1|MUSVITA Mouse vitronectin mRNA, complete cds 72 2e-10
ref|XM_031492.1| Homo sapiens vitronectin (serum spreading ... 72 2e-10
ref|NM_011707.1| Mus musculus vitronectin (Vtn), mRNA 72 2e-10
emb|X63003.1|MMVITN M.musculus mRNA for vitronectin 72 2e-10
ref|NM_000638.2| Homo sapiens vitronectin (serum spreading ... 72 2e-10
gb|BC012690.1|BC012690 Mus musculus, Similar to vitronectin... 72 2e-10
gb|BC005046.1|BC005046 Homo sapiens, clone MGC:12819 IMAGE:... 72 2e-10
dbj|AP000349.1|AP000349 Homo sapiens genomic DNA, chromosom... 67 2e-10
emb|Y11030.1|GGVITRO G.gallus mRNA for vitronectin 71 4e-10
gb|U64803.1|CCU64803 Coturnix coturnix nectinepsin mRNA, co... 70 6e-10
emb|AJ332942.1|HSA332942 Homo sapiens genomic sequence surr... 69 1e-09
emb|X72794.1|MMMMP9A M.musculus gene for gelatinase B 69 1e-09
ref|NM_019156.1| Rattus norvegicus vitronectin (Vtn), mRNA 69 2e-09
gb|U44845.1|RNU44845 Rattus norvegicus vitronectin mRNA, co... 69 2e-09
gb|AF040648.2| Caenorhabditis elegans cosmid H19M22, comple... 68 2e-09
ref|NM_074277.1| zinc metalloprotease 68 3e-09
gb|AF440693.1|AF440693 Mus musculus vitronectin mRNA, compl... 68 3e-09
emb|X65722.1|PLHATCHG P.lividus gene for hatching enzyme 68 3e-09
gb|M55584.1|HUMCLG4Q04 Human collagenase type IV (CLG4) gen... 68 3e-09
gb|L22523.1|HUMMATRY05 Human matrilysin gene, exon 5 67 7e-09
gb|AF291665.1|AF291665 Homo sapiens matrix metalloproteinas... 67 7e-09
gb|AC090893.5| Homo sapiens chromosome 11, clone RP11-390G2... 67 7e-09
dbj|AP001830.4|AP001830 Homo sapiens genomic DNA, chromosom... 67 7e-09
gb|AC018375.8| Homo sapiens, clone RP11-3P24, complete sequ... 67 7e-09
gb|AF405705.1|AF405705 Homo sapiens matrix metalloproteinas... 66 9e-09
gb|AF156950.1|F156947S04 Mus musculus matrix metalloprotein... 66 1e-08
gb|L36240.1|MUSMAT04 Mus musculus metalloproteinase matrily... 66 1e-08
gb|M68346.1|HUMIVCOL04 Human type IV collagenase (CLG4B) ge... 66 1e-08
emb|AL162458.10|AL162458 Human DNA sequence from clone RP11... 66 1e-08
gb|M19240.1|RABCN4 Oryctolagus cuniculus collagenase-1 prec... 65 1e-08
emb|AJ338123.1|HSA338123 Homo sapiens genomic sequence surr... 65 1e-08
gb|AF022425.1|MM14MMP2 Mus musculus matrix metalloproteinas... 65 1e-08
dbj|AB043995.1|AB043995 Bos taurus bmmp-3 mRNA for MMP-3, p... 65 2e-08
gb|L22522.1|HUMMATRY04 Human matrilysin gene, exon 4 65 2e-08
emb|X07823.1|RN3TRAN4 Rat transin-3 gene exon 4 65 3e-08
dbj|D63145.1|PIGVITRON Pig mRNA for vitronectin, complete cds 64 3e-08
dbj|D61396.1|D61396 Porcine mRNA for vitronectin, complete cds 64 3e-08
emb|X07824.1|RN3TRAN5 Rat transin-3 gene exon 5 64 6e-08
dbj|AB010962.1|AB010962 Homo sapiens mRNA for MIFR-2, compl... 63 7e-08
gb|AF057062.1|AF057062 Homo sapiens metalloprotease mmp21/2... 63 7e-08
dbj|AP001486.4|AP001486 Homo sapiens genomic DNA, chromosom... 62 2e-07
emb|AJ329935.1|HSA329935 Homo sapiens genomic sequence surr... 60 6e-07
ref|XM_083245.1| 4878, mRNA 60 8e-07
emb|AJ339481.1|HSA339481 Homo sapiens genomic sequence surr... 59 1e-06
gb|L36239.1|MUSMAT05 Mus musculus metalloproteinase matrily... 59 1e-06
gb|M64996.1|CRBLIMUNEC Limulus polyphemus limunectin gene 59 1e-06
gb|U51571.1|CPU51571 Cavia porcellus stromelysin 1 mRNA, pa... 49 1e-06
gb|M68350.1|HUMIVCOL08 Human type IV collagenase (CLG4B) ge... 59 1e-06
ref|NM_022790.1| Homo sapiens matrix metalloproteinase 19 (... 56 1e-06
gb|U38320.1|HSU38320 Homo sapiens clone rasi-3 matrix metal... 56 1e-06
gb|U00037.1|CELT20H4 Caenorhabditis elegans cosmid T20H4 59 2e-06
gb|U00038.2| Caenorhabditis elegans cosmid T21D11, complete... 59 2e-06
ref|NM_021400.1| Mus musculus proteoglycan 3 (megakaryocyte... 57 5e-06
dbj|AB034730.1|AB034730 Mus musculus mRNA, complete cds, si... 57 5e-06
gb|U70919.1|XCU70919 Xestia c-nigrum granulosis virus matri... 57 5e-06
gb|M17822.1|RABCN3 Oryctolagus cuniculus collagenase-1 prec... 56 9e-06
emb|X81640.1|HSCGN3PRO H.sapiens promoter region of collage... 56 1e-05
emb|X64020.1|RNTST2B R.norvegicus mRNA for transin/stromely... 54 1e-05
gb|U41266.1| Caenorhabditis elegans cosmid EGAP1, complete ... 55 3e-05
emb|AJ339486.1|HSA339486 Homo sapiens genomic sequence surr... 55 3e-05
gb|AF022426.1|MM14MMP3 Mus musculus matrix metalloproteinas... 55 3e-05
gb|M55591.1|HUMCLG4Q11 Human collagenase type IV (CLG4) gen... 54 6e-05
emb|Z95309.1|CEH36L18 Caenorhabditis elegans cosmid H36L18,... 51 6e-05
gb|AF156948.1|F156947S02 Mus musculus matrix metalloprotein... 52 1e-04
gb|AF147104.1|AF147104 Canis familiaris type IV collagenase... 52 2e-04
gb|AF022431.1|MM14MMP8 Mus musculus matrix metalloproteinas... 52 2e-04
gb|AC022911.6| Homo sapiens chromosome 18, clone RP11-722A1... 36 8e-04
gb|AF056218.1|AF056218 Bos taurus superficial zone protein ... 50 8e-04
gb|AF281360.1| Oncorhynchus mykiss putative vitronectin-lik... 50 8e-04
ref|XM_001738.4| Homo sapiens proteoglycan 4, (megakaryocyt... 50 8e-04
ref|NM_005807.1| Homo sapiens proteoglycan 4, (megakaryocyt... 50 8e-04
gb|U70136.1|HSU70136 Human megakaryocyte stimulating factor... 50 8e-04
dbj|AK057197.1|AK057197 Homo sapiens cDNA FLJ32635 fis, clo... 50 8e-04
emb|AJ338213.1|HSA338213 Homo sapiens genomic sequence surr... 49 0.001
gb|U25950.1|PMU25950 Proteus mirabilis metalloprotease gene... 48 0.003
gb|L22520.1|HUMMATRY02 Human matrilysin gene, exon 2 48 0.003
gb|M55582.1|HUMCLG4Q02 Human collagenase type IV (CLG4) gen... 48 0.003
gb|AF064762.1|AF064762 Proteus mirabilis metalloprotease op... 48 0.003
ref|NM_000613.1| Homo sapiens hemopexin (HPX), mRNA 47 0.004
gb|J03048.1|HUMHXMA Huma hemopexin mRNA, 3' end 47 0.004
emb|X02537.1|HSHEPEXR Human mRNA for serum beta-glycoprotei... 47 0.004
gb|BC005395.1|BC005395 Homo sapiens, Similar to hemopexin, ... 47 0.004
gb|AF057061.1|AF057061 Homo sapiens metalloprotease mmp21/2... 47 0.004
gb|L36242.1|MUSMAT02 Mus musculus metalloproteinase matrily... 46 0.009
gb|AF147750.1|AF147750 Canis familiaris matrix metalloprote... 46 0.009
emb|X16429.1|OCHEMOPEX O.cuniculus mRNA for hemopexin 46 0.009
emb|Y18249.1|MTY18249 Medicago truncatula mRNA for MtN9 gen... 45 0.027
emb|AL360176.22|AL360176 Human DNA sequence from clone RP11... 44 0.046
gb|AF022429.1|MM14MMP6 Mus musculus matrix metalloproteinas... 44 0.061
gb|M60395.1|ERWPRTBCDE Erwinia chrysanthemi prt locus encod... 43 0.10
gb|M59229.1|ERWPRTCA E.chrysanthemi metalloprotease C (prtC... 43 0.10
gb|AY064211.1| Caulobacter crescentus S-layer editing metal... 42 0.14
gb|AE005750.1|AE005750 Caulobacter crescentus section 76 o... 42 0.18
emb|Y17314.1|PSY17314 Pseudomonas sp. 'TAC II 18' PAPRA gene 42 0.18
gb|BC011774.1|BC011774 Homo sapiens, Similar to matrix meta... 42 0.18
emb|X07821.1|RN3TRAN2 Rat transin-3 gene exon 2 42 0.23
emb|X04127.1|SSPROT Serratia (sp. E-15) gene for extracellu... 41 0.39
emb|X55521.1|SMMESM6 Serratia marcescens metalloprotease gene 41 0.39
gb|U14751.1|SSU14751 Sus scrofa hyaluronidase mRNA, complet... 41 0.39
gb|AF063866.1|AF063866 Melanoplus sanguinipes entomopoxviru... 41 0.39
gb|M68344.1|HUMIVCOL02 Human type IV collagenase (CLG4B) ge... 40 0.51
gb|AE007196.1|AE007196 Sinorhizobium meliloti plasmid pSymA... 40 0.51
gb|AF086353.1|HUMZD63C05 Homo sapiens full length insert cD... 40 0.67
dbj|AB052623.1|AB052623 Cyprinus carpio wap65 mRNA for warm... 39 1.1
gb|AC024801.2| Caenorhabditis elegans cosmid Y50D7A, comple... 39 1.1
emb|AJ007827.1|PTO7827 Pseudomonas tolaasii eprA, eprI, epr... 39 1.1
ref|XM_100736.1| Homo sapiens LOC160118 (LOC160118), mRNA 39 1.5
gb|AF055334.1|AF055334 Homo sapiens metalloprotease isoform... 39 1.5
emb|AL031282.1|HS283E3 Human DNA sequence from clone 283E3 ... 39 1.5
dbj|AB031068.1|AB031068 Homo sapiens gene for MIFR/Femalysi... 39 1.5
gb|AC002324.1|AC002324 Mus musculus chromosome 11, clone 47... 39 2.0
emb|X72091.1|MMVITRO M.musculus gene for vitronectin 39 2.0
dbj|AB013895.1|AB013895 Pseudomonas fluorescens gene for me... 39 2.0
gb|U20861.1| Caenorhabditis elegans cosmid C28H8, complete ... 38 2.5
emb|X70011.1|ECPROTA E.chrysanthemi gene for protease A 38 3.3
gb|M37390.1|ERWPRTC E.chrysanthemi metalloprotease C (prtC)... 38 3.3
gb|AF083061.1|AF083061 Pseudomonas fluorescens protease Prt... 38 3.3
gb|M62642.1|RATHMPX Rat (clone pRHx1) hemopexin mRNA, compl... 37 4.3
ref|NM_053318.1| Rattus norvegicus hemopexin (Hpx), mRNA 37 4.3
gb|M93262.1|ERWPRTAB Erwinia chrysanthemi (prtA and prtB) g... 37 4.3
gb|AF004848.1|AF004848 Pseudomonas fluorescens alkaline pro... 37 5.7
gb|AF393466.1|AF393466 Uncultured crenarchaeote 74A4 partia... 37 5.7
emb|AJ414160.1|AJ414160 Yersinia pestis strain CO92 complet... 37 5.7
gb|BC011246.1|BC011246 Mus musculus, clone MGC:19095 IMAGE:... 37 7.4
gb|U89889.1|MMU89889 Mus musculus hemopexin mRNA, partial cds 37 7.4
gb|AF286062.1|AF286062 Pseudomonas brassicacearum phase var... 37 7.4
gb|BC019901.1|BC019901 Homo sapiens, clone MGC:29981 IMAGE:... 37 7.4
>gb|U66463.1|GGU66463 Gallus gallus membrane type-matrix metalloproteinase (MT3-MMP)
mRNA, complete cds
Length = 5736
Score = 1187 bits (3071), Expect = 0.0
Identities = 571/608 (93%), Positives = 571/608 (93%)
Frame = +1
Query: 1 MIVLALSTGSRLDFVSQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRM 60
MIVLALSTGSRLDFVSQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 115 MIVLALSTGSRLDFVSQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRM 294
Query: 61 SVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY
Sbjct: 295 SVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 474
Query: 121 ALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKR 180
ALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKR
Sbjct: 475 ALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKR 654
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 655 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 834
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 835 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDRIPPPT 1014
Query: 301 XXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMF 360
HRSIPPA SYPGAKPNICDGNFNTLVILRREMF
Sbjct: 1015RPLPTVPPHRSIPPADPRKNDRQPKPPRPPTGDKPSYPGAKPNICDGNFNTLVILRREMF 1194
Query: 361 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTT 420
VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTT
Sbjct: 1195VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTT 1374
Query: 421 LQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT 480
LQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT
Sbjct: 1375LQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT 1554
Query: 481 IWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKMLRVEPGYPRSILKDFMGCDGPTDRD 540
IWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKMLRVEPGYPRSILKDFMGCDGPTDRD
Sbjct: 1555IWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKMLRVEPGYPRSILKDFMGCDGPTDRD 1734
Query: 541 KDRHSPQDDVDIIIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILYC 600
KDRHSPQDDVDIIIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILYC
Sbjct: 1735KDRHSPQDDVDIIIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILYC 1914
Query: 601 KRSMQEWV 608
KRSMQEWV
Sbjct: 1915KRSMQEWV 1938
>ref|NM_005941.2| Homo sapiens matrix metalloproteinase 16 (membrane-inserted)
(MMP16), transcript variant 1, mRNA
Length = 2589
Score = 1100 bits (2846), Expect = 0.0
Identities = 528/609 (86%), Positives = 544/609 (88%), Gaps = 1/609 (0%)
Frame = +2
Query: 1 MIVLALSTGSRLDFVSQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRM 60
MI+L STG RLDFV S V FLQT +WILCATVC EQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 113 MILLTFSTGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 292
Query: 61 SVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSA+AAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKF+IRRKRY
Sbjct: 293 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFHIRRKRY 472
Query: 121 ALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKR 180
ALTGQKWQHKHI YSIKNVTPKVGD ETRKAIRRAFDVWQNVTPLTFEEVPY ELENGKR
Sbjct: 473 ALTGQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKR 652
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 653 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 832
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 833 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 1012
Query: 301 XXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMF 360
HRSIPPA SYPGAKPNICDGNFNTL ILRREMF
Sbjct: 1013RPLPTVPPHRSIPPA--DPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMF 1186
Query: 361 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTT 420
VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS+GNFVFFK NK+WVFKDTT
Sbjct: 1187VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTT 1366
Query: 421 LQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT 480
LQPGYPHDLITLGSGIP HGIDSAIWWEDVGKTYFFKGDRYWRY EEM++MDPGYPKPIT
Sbjct: 1367LQPGYPHDLITLGSGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT 1546
Query: 481 IWKGIPESPQGAFVHKENGFTYFIKEKSTGN-STKMLRVEPGYPRSILKDFMGCDGPTDR 539
+WKGIPESPQGAFVHKENGFTYF K K + ++L+VEPGYPRSILKDFMGCDGPTDR
Sbjct: 1547VWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDR 1726
Query: 540 DKDRHSPQDDVDIIIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILY 599
K+ HSP DDVDI+IKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKR+GTPRHILY
Sbjct: 1727VKEGHSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILY 1906
Query: 600 CKRSMQEWV 608
CKRSMQEWV
Sbjct: 1907CKRSMQEWV 1933
>dbj|D83646.1|HUMMETALL Homo sapiens mRNA for metalloproteinase, complete cds
Length = 2477
Score = 1100 bits (2846), Expect = 0.0
Identities = 528/609 (86%), Positives = 544/609 (88%), Gaps = 1/609 (0%)
Frame = +1
Query: 1 MIVLALSTGSRLDFVSQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRM 60
MI+L STG RLDFV S V FLQT +WILCATVC EQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 1 MILLTFSTGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 180
Query: 61 SVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSA+AAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKF+IRRKRY
Sbjct: 181 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFHIRRKRY 360
Query: 121 ALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKR 180
ALTGQKWQHKHI YSIKNVTPKVGD ETRKAIRRAFDVWQNVTPLTFEEVPY ELENGKR
Sbjct: 361 ALTGQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKR 540
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 541 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 720
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 721 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 900
Query: 301 XXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMF 360
HRSIPPA SYPGAKPNICDGNFNTL ILRREMF
Sbjct: 901 RPLPTVPPHRSIPPA--DPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMF 1074
Query: 361 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTT 420
VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS+GNFVFFK NK+WVFKDTT
Sbjct: 1075VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTT 1254
Query: 421 LQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT 480
LQPGYPHDLITLGSGIP HGIDSAIWWEDVGKTYFFKGDRYWRY EEM++MDPGYPKPIT
Sbjct: 1255LQPGYPHDLITLGSGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT 1434
Query: 481 IWKGIPESPQGAFVHKENGFTYFIKEKSTGN-STKMLRVEPGYPRSILKDFMGCDGPTDR 539
+WKGIPESPQGAFVHKENGFTYF K K + ++L+VEPGYPRSILKDFMGCDGPTDR
Sbjct: 1435VWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDR 1614
Query: 540 DKDRHSPQDDVDIIIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILY 599
K+ HSP DDVDI+IKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKR+GTPRHILY
Sbjct: 1615VKEGHSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILY 1794
Query: 600 CKRSMQEWV 608
CKRSMQEWV
Sbjct: 1795CKRSMQEWV 1821
>dbj|D85511.1|D85511 Homo sapiens mRNA for MT3-MMP, complete cds
Length = 2052
Score = 1100 bits (2846), Expect = 0.0
Identities = 528/609 (86%), Positives = 544/609 (88%), Gaps = 1/609 (0%)
Frame = +3
Query: 1 MIVLALSTGSRLDFVSQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRM 60
MI+L STG RLDFV S V FLQT +WILCATVC EQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 36 MILLTFSTGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 215
Query: 61 SVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSA+AAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKF+IRRKRY
Sbjct: 216 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFHIRRKRY 395
Query: 121 ALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKR 180
ALTGQKWQHKHI YSIKNVTPKVGD ETRKAIRRAFDVWQNVTPLTFEEVPY ELENGKR
Sbjct: 396 ALTGQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKR 575
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 576 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 755
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 756 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 935
Query: 301 XXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMF 360
HRSIPPA SYPGAKPNICDGNFNTL ILRREMF
Sbjct: 936 RPLPTVPPHRSIPPA--DPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMF 1109
Query: 361 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTT 420
VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS+GNFVFFK NK+WVFKDTT
Sbjct: 1110VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTT 1289
Query: 421 LQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT 480
LQPGYPHDLITLGSGIP HGIDSAIWWEDVGKTYFFKGDRYWRY EEM++MDPGYPKPIT
Sbjct: 1290LQPGYPHDLITLGSGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT 1469
Query: 481 IWKGIPESPQGAFVHKENGFTYFIKEKSTGN-STKMLRVEPGYPRSILKDFMGCDGPTDR 539
+WKGIPESPQGAFVHKENGFTYF K K + ++L+VEPGYPRSILKDFMGCDGPTDR
Sbjct: 1470VWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDR 1649
Query: 540 DKDRHSPQDDVDIIIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILY 599
K+ HSP DDVDI+IKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKR+GTPRHILY
Sbjct: 1650VKEGHSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILY 1829
Query: 600 CKRSMQEWV 608
CKRSMQEWV
Sbjct: 1830CKRSMQEWV 1856
>ref|NM_019724.1| Mus musculus matrix metalloproteinase 16 (Mmp16), mRNA
Length = 2055
Score = 1099 bits (2843), Expect = 0.0
Identities = 527/609 (86%), Positives = 545/609 (88%), Gaps = 1/609 (0%)
Frame = +1
Query: 1 MIVLALSTGSRLDFVSQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRM 60
MI+LA S+G RLDFV S V FLQT +WILCATVC EQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 55 MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 234
Query: 61 SVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSA+AAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY
Sbjct: 235 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 414
Query: 121 ALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKR 180
ALTGQKWQHKHI YSIKNVTPKVGD ETR+AIRRAFDVWQNVTPLTFEEVPY ELENGKR
Sbjct: 415 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 594
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 595 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 774
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 775 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 954
Query: 301 XXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMF 360
HRS+PPA SYPGAKPNICDGNFNTL ILRREMF
Sbjct: 955 RPLPTVPPHRSVPPA--DPRRHDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMF 1128
Query: 361 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTT 420
VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS+GNFVFFK NK+WVFKDTT
Sbjct: 1129VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTT 1308
Query: 421 LQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT 480
LQPGYPHDLITLG+GIP HGIDSAIWWEDVGKTYFFKGDRYWRY EEM++MDPGYPKPIT
Sbjct: 1309LQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT 1488
Query: 481 IWKGIPESPQGAFVHKENGFTYFIKEKSTGN-STKMLRVEPGYPRSILKDFMGCDGPTDR 539
IWKGIPESPQGAFVHKENGFTYF K K + ++L+VEPGYPRSILKDFMGCDGPTDR
Sbjct: 1489IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDR 1668
Query: 540 DKDRHSPQDDVDIIIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILY 599
DK+ SP DDVDI+IKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKR+GTPRHILY
Sbjct: 1669DKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILY 1848
Query: 600 CKRSMQEWV 608
CKRSMQEWV
Sbjct: 1849CKRSMQEWV 1875
>dbj|AB021228.1|AB021228 Mus musculus mRNA for membrane-type-3 matrix metalloproteinase,
complete cds
Length = 2055
Score = 1099 bits (2843), Expect = 0.0
Identities = 527/609 (86%), Positives = 545/609 (88%), Gaps = 1/609 (0%)
Frame = +1
Query: 1 MIVLALSTGSRLDFVSQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRM 60
MI+LA S+G RLDFV S V FLQT +WILCATVC EQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 55 MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 234
Query: 61 SVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSA+AAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY
Sbjct: 235 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 414
Query: 121 ALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKR 180
ALTGQKWQHKHI YSIKNVTPKVGD ETR+AIRRAFDVWQNVTPLTFEEVPY ELENGKR
Sbjct: 415 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 594
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 595 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 774
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 775 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 954
Query: 301 XXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMF 360
HRS+PPA SYPGAKPNICDGNFNTL ILRREMF
Sbjct: 955 RPLPTVPPHRSVPPA--DPRRHDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMF 1128
Query: 361 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTT 420
VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS+GNFVFFK NK+WVFKDTT
Sbjct: 1129VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTT 1308
Query: 421 LQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT 480
LQPGYPHDLITLG+GIP HGIDSAIWWEDVGKTYFFKGDRYWRY EEM++MDPGYPKPIT
Sbjct: 1309LQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT 1488
Query: 481 IWKGIPESPQGAFVHKENGFTYFIKEKSTGN-STKMLRVEPGYPRSILKDFMGCDGPTDR 539
IWKGIPESPQGAFVHKENGFTYF K K + ++L+VEPGYPRSILKDFMGCDGPTDR
Sbjct: 1489IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDR 1668
Query: 540 DKDRHSPQDDVDIIIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILY 599
DK+ SP DDVDI+IKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKR+GTPRHILY
Sbjct: 1669DKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILY 1848
Query: 600 CKRSMQEWV 608
CKRSMQEWV
Sbjct: 1849CKRSMQEWV 1875
>dbj|AB009303.1|AB009303 Homo sapiens mRNA for membrane-type matrix metalloproteinase 3,
complete cds
Length = 2116
Score = 1098 bits (2841), Expect = 0.0
Identities = 527/609 (86%), Positives = 544/609 (88%), Gaps = 1/609 (0%)
Frame = +2
Query: 1 MIVLALSTGSRLDFVSQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRM 60
MI+L STG RLDFV S V FLQT +WILCATVC EQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 113 MILLTFSTGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 292
Query: 61 SVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSA+AAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKF+IRRKRY
Sbjct: 293 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFHIRRKRY 472
Query: 121 ALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKR 180
ALTGQKWQHKHI YSIKNVTPKVGD ETRKAIRRAFDVWQNVTPLTFEEVPY ELENGKR
Sbjct: 473 ALTGQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKR 652
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 653 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 832
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 833 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 1012
Query: 301 XXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMF 360
HRSIPPA SYPGAKPNICDGNFNTL ILRREMF
Sbjct: 1013RPLPTVPPHRSIPPA--DPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMF 1186
Query: 361 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTT 420
VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS+GNFVFFK NK+WVFKDTT
Sbjct: 1187VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTT 1366
Query: 421 LQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT 480
LQPGYPHDLITLGSGIP HGIDSAIWWEDVGKTYFFKGDRYWRY EEM++MDPGYPKPIT
Sbjct: 1367LQPGYPHDLITLGSGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT 1546
Query: 481 IWKGIPESPQGAFVHKENGFTYFIKEKSTGN-STKMLRVEPGYPRSILKDFMGCDGPTDR 539
+WKGIPESPQGAFVHKENGFTYF K K + ++L+VEPG+PRSILKDFMGCDGPTDR
Sbjct: 1547VWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGHPRSILKDFMGCDGPTDR 1726
Query: 540 DKDRHSPQDDVDIIIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILY 599
K+ HSP DDVDI+IKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKR+GTPRHILY
Sbjct: 1727VKEGHSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILY 1906
Query: 600 CKRSMQEWV 608
CKRSMQEWV
Sbjct: 1907CKRSMQEWV 1933
>gb|AF282844.1|AF282844 Mus musculus matrix metalloproteinase 16 (Mmp16) mRNA, complete cds
Length = 1880
Score = 1097 bits (2838), Expect = 0.0
Identities = 526/609 (86%), Positives = 545/609 (89%), Gaps = 1/609 (0%)
Frame = +1
Query: 1 MIVLALSTGSRLDFVSQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRM 60
MI+LA S+G RLDFV +S V FLQT +WILCATVC EQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 7 MILLAFSSGRRLDFVHRSVVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 186
Query: 61 SVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSA+AAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY
Sbjct: 187 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 366
Query: 121 ALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKR 180
ALTGQKWQHKHI YSIKNVTPKVGD ETR+AIRRAFDVWQNVTPLTFEEVPY ELENGKR
Sbjct: 367 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 546
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGD SPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 547 DVDITIIFASGFHGDRSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 726
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 727 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 906
Query: 301 XXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMF 360
HRS+PPA SYPGAKPNICDGNFNTL ILRREMF
Sbjct: 907 RPLPTVPPHRSVPPA--DPRRHDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMF 1080
Query: 361 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTT 420
VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS+GNFVFFK NK+WVFKDTT
Sbjct: 1081VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTT 1260
Query: 421 LQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT 480
LQPGYPHDLITLG+GIP HGIDSAIWWEDVGKTYFFKGDRYWRY EEM++MDPGYPKPIT
Sbjct: 1261LQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT 1440
Query: 481 IWKGIPESPQGAFVHKENGFTYFIKEKSTGN-STKMLRVEPGYPRSILKDFMGCDGPTDR 539
IWKGIPESPQGAFVHKENGFTYF K K + ++L+VEPGYPRSILKDFMGCDGPTDR
Sbjct: 1441IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDR 1620
Query: 540 DKDRHSPQDDVDIIIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILY 599
DK+ SP DDVDI+IKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKR+GTPRHILY
Sbjct: 1621DKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILY 1800
Query: 600 CKRSMQEWV 608
CKRSMQEWV
Sbjct: 1801CKRSMQEWV 1827
>dbj|D85509.1|D85509 Rattus rattus mRNA for MT3-MMP, complete cds
Length = 3517
Score = 1096 bits (2835), Expect = 0.0
Identities = 525/609 (86%), Positives = 544/609 (89%), Gaps = 1/609 (0%)
Frame = +3
Query: 1 MIVLALSTGSRLDFVSQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRM 60
MI+LA S+G RLDFV +S V F QT +WILCATVC EQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 432 MILLAFSSGRRLDFVHRSGVFFFQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 611
Query: 61 SVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSA+AAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY
Sbjct: 612 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 791
Query: 121 ALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKR 180
ALTGQKWQHKHI YSIKNVTPKVGD ETR+AIRRAFDVWQNVTPLTFEEVPY ELENGKR
Sbjct: 792 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 971
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGD SPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 972 DVDITIIFASGFHGDRSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 1151
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 1152 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 1331
Query: 301 XXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMF 360
HRS+PPA SYPGAKPNICDGNFNTL ILRREMF
Sbjct: 1332 RPLPTVPPHRSVPPA--DPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMF 1505
Query: 361 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTT 420
VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS+GNFVFFK NK+WVFKDTT
Sbjct: 1506 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTT 1685
Query: 421 LQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT 480
LQPGYPHDLITLG+GIP HGIDSAIWWEDVGKTYFFKGDRYWRY EEM++MDPGYPKPIT
Sbjct: 1686 LQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT 1865
Query: 481 IWKGIPESPQGAFVHKENGFTYFIKEKSTGN-STKMLRVEPGYPRSILKDFMGCDGPTDR 539
IWKGIPESPQGAFVHKENGFTYF K K + ++L+VEPGYPRSILKDFMGCDGPTDR
Sbjct: 1866 IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDR 2045
Query: 540 DKDRHSPQDDVDIIIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILY 599
DK+ SP DDVDI+IKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKR+GTPRHILY
Sbjct: 2046 DKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILY 2225
Query: 600 CKRSMQEWV 608
CKRSMQEWV
Sbjct: 2226 CKRSMQEWV 2252
>ref|NM_080776.1| Rattus norvegicus matrix metalloproteinase 16 (Mmp16), mRNA
Length = 3519
Score = 978 bits (2527), Expect(2) = 0.0
Identities = 466/547 (85%), Positives = 483/547 (88%), Gaps = 1/547 (0%)
Frame = +3
Query: 1 MIVLALSTGSRLDFVSQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRM 60
MI+LA S+G RLDFV +S V F QT +WILCATVC EQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 432 MILLAFSSGRRLDFVHRSGVFFFQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 611
Query: 61 SVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSA+AAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY
Sbjct: 612 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 791
Query: 121 ALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKR 180
ALTGQKWQHKHI YSIKNVTPKVGD ETR+AIRRAFDVWQNVTPLTFEEVPY ELENGKR
Sbjct: 792 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 971
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGD SPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 972 DVDITIIFASGFHGDRSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 1151
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 1152FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 1331
Query: 301 XXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMF 360
HRS+PPA SYPGAKPNICDGNFNTL ILRREMF
Sbjct: 1332RPLPTVPPHRSVPPA--DPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMF 1505
Query: 361 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTT 420
VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS+GNFVFFK NK+WVFKDTT
Sbjct: 1506VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTT 1685
Query: 421 LQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT 480
LQPGYPHDLITLG+GIP HGIDSAIWWEDVGKTYFFKGDRYWRY EEM++MDPGYPKPIT
Sbjct: 1686LQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT 1865
Query: 481 IWKGIPESPQGAFVHKENGFTYFIKEKSTGN-STKMLRVEPGYPRSILKDFMGCDGPTDR 539
IWKGIPESPQGAFVHKENGFTYF K K + ++L+VEPGYPRSILKDFMGCDGPTDR
Sbjct: 1866IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDR 2045
Query: 540 DKDRHSP 546
DK+ SP
Sbjct: 2046DKEGLSP 2066
Score = 67.4 bits (163), Expect(2) = 0.0
Identities = 30/31 (96%), Positives = 31/31 (99%)
Frame = +2
Query: 578 LLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
LLVLVYTVFQFKR+GTPRHILYCKRSMQEWV
Sbjct: 2162 LLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 2254
Score = 56.2 bits (134), Expect = 9e-06
Identities = 39/83 (46%), Positives = 44/83 (52%), Gaps = 11/83 (13%)
Frame = +1
Query: 505 KEKSTGNSTKMLRVEPGYPRSILKDFMGCDGPTDRD-----------KDRHSPQDDVDII 553
KE+S GNST K +G P+ R K + DVDI+
Sbjct: 1939 KERSIGNSTTRYS----------K*NLGIQDPSSRTLWAVMDQQTEIKKVSAHHHDVDIV 2088
Query: 554 IKLDNTASTVKAIAIVIPCILAL 576
IKLDNTASTVKAIAIVIPCILAL
Sbjct: 2089 IKLDNTASTVKAIAIVIPCILAL 2157
>dbj|D63886.1|D63886 Rattus sp. mRNA for MT3-MMP-del, complete cds
Length = 3519
Score = 978 bits (2527), Expect(2) = 0.0
Identities = 466/547 (85%), Positives = 483/547 (88%), Gaps = 1/547 (0%)
Frame = +3
Query: 1 MIVLALSTGSRLDFVSQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRM 60
MI+LA S+G RLDFV +S V F QT +WILCATVC EQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 432 MILLAFSSGRRLDFVHRSGVFFFQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 611
Query: 61 SVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSA+AAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY
Sbjct: 612 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 791
Query: 121 ALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKR 180
ALTGQKWQHKHI YSIKNVTPKVGD ETR+AIRRAFDVWQNVTPLTFEEVPY ELENGKR
Sbjct: 792 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 971
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGD SPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 972 DVDITIIFASGFHGDRSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 1151
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 1152FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 1331
Query: 301 XXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMF 360
HRS+PPA SYPGAKPNICDGNFNTL ILRREMF
Sbjct: 1332RPLPTVPPHRSVPPA--DPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMF 1505
Query: 361 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTT 420
VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS+GNFVFFK NK+WVFKDTT
Sbjct: 1506VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTT 1685
Query: 421 LQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT 480
LQPGYPHDLITLG+GIP HGIDSAIWWEDVGKTYFFKGDRYWRY EEM++MDPGYPKPIT
Sbjct: 1686LQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT 1865
Query: 481 IWKGIPESPQGAFVHKENGFTYFIKEKSTGN-STKMLRVEPGYPRSILKDFMGCDGPTDR 539
IWKGIPESPQGAFVHKENGFTYF K K + ++L+VEPGYPRSILKDFMGCDGPTDR
Sbjct: 1866IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDR 2045
Query: 540 DKDRHSP 546
DK+ SP
Sbjct: 2046DKEGLSP 2066
Score = 67.4 bits (163), Expect(2) = 0.0
Identities = 30/31 (96%), Positives = 31/31 (99%)
Frame = +2
Query: 578 LLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
LLVLVYTVFQFKR+GTPRHILYCKRSMQEWV
Sbjct: 2162 LLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 2254
Score = 56.2 bits (134), Expect = 9e-06
Identities = 39/83 (46%), Positives = 44/83 (52%), Gaps = 11/83 (13%)
Frame = +1
Query: 505 KEKSTGNSTKMLRVEPGYPRSILKDFMGCDGPTDRD-----------KDRHSPQDDVDII 553
KE+S GNST K +G P+ R K + DVDI+
Sbjct: 1939 KERSIGNSTTRYS----------K*NLGIQDPSSRTLWAVMDQQTEIKKVSAHHHDVDIV 2088
Query: 554 IKLDNTASTVKAIAIVIPCILAL 576
IKLDNTASTVKAIAIVIPCILAL
Sbjct: 2089 IKLDNTASTVKAIAIVIPCILAL 2157
>gb|AF244994.1|AF244994 Scyliorhinus torazame membrane type-3 matrix metalloproteinase
(MT3-MMP) mRNA, complete cds
Length = 1842
Score = 893 bits (2308), Expect = 0.0
Identities = 426/604 (70%), Positives = 480/604 (78%), Gaps = 1/604 (0%)
Frame = +1
Query: 6 LSTGSRLDFVSQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRS 65
L G +L FV S +LQT +WI+C+ VC EQ F+VE+WLQKYGYL ++PRMSVLRS
Sbjct: 34 LYKGKQLAFV-YSGAFYLQTLLWIICS-VCGEEQPFSVEIWLQKYGYLQASEPRMSVLRS 207
Query: 66 AETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQ 125
+++M SA+AAMQQFYGI +TG +D NTIDWMKKPRCGVPDQ S +F++RRKRYALTGQ
Sbjct: 208 SQSMHSAVAAMQQFYGIKVTGTLDENTIDWMKKPRCGVPDQFGSSIRFSVRRKRYALTGQ 387
Query: 126 KWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDIT 185
KW HKHI YSIKN TPKVG ET +AIRRAFDVWQNVTPLTFEE+PY+ELEN KRDVDIT
Sbjct: 388 KWHHKHITYSIKNFTPKVGKLETHRAIRRAFDVWQNVTPLTFEEIPYVELENKKRDVDIT 567
Query: 186 IIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAV 245
I+FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVA
Sbjct: 568 IMFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAA 747
Query: 246 HELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXX 305
HELGHALGLEHSNDP+AIMAPFYQYM+T+NF+LP DDLQGIQKIYG
Sbjct: 748 HELGHALGLEHSNDPSAIMAPFYQYMDTENFQLPQDDLQGIQKIYGPPDKIAHPTKPLPT 927
Query: 306 XXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFVFKDQ 365
HR PP+ S+PGAKPNICDGNFNTL ILR EMFVFKD
Sbjct: 928 VPPHRFNPPSDPRKPSRQPRPPRPPTRDKPSFPGAKPNICDGNFNTLAILRGEMFVFKDH 1107
Query: 366 WFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGY 425
WFWRVRNNRV+DGYPMQI YFWRGLP + ++G FVF K +K+WVFK+ TL+ GY
Sbjct: 1108WFWRVRNNRVLDGYPMQIAYFWRGLPSKHLSSLGTADGKFVFLKGSKYWVFKEATLELGY 1287
Query: 426 PHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGI 485
P +++ LGSG+PS GIDSA+WWEDVGKTYFFKGDRYWRY EE + GYPK I+IWKGI
Sbjct: 1288PQNVVELGSGVPSQGIDSAVWWEDVGKTYFFKGDRYWRYNEETHVVGSGYPKSISIWKGI 1467
Query: 486 PESPQGAFVHKENGFTYFIKEKSTGN-STKMLRVEPGYPRSILKDFMGCDGPTDRDKDRH 544
P+SPQGAFV KE+G+T+F K K + LRVEP YPRSILK++MGCD DKDRH
Sbjct: 1468PKSPQGAFVSKESGYTFFYKGKEYWKFNNHKLRVEPSYPRSILKEWMGCDRTKTGDKDRH 1647
Query: 545 SPQDDVDIIIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILYCKRSM 604
QDDVDI+IK+DNT STV AIAIVIPC LALC LVL+YTV QFKR+GTPRHILY KRSM
Sbjct: 1648DTQDDVDIVIKIDNTLSTVNAIAIVIPCTLALCFLVLIYTVVQFKRKGTPRHILYSKRSM 1827
Query: 605 QEWV 608
QEWV
Sbjct: 1828QEWV 1839
>ref|NM_006690.2| Homo sapiens matrix metalloproteinase 24 (membrane-inserted)
(MMP24), mRNA
Length = 2623
Score = 765 bits (1976), Expect = 0.0
Identities = 366/587 (62%), Positives = 439/587 (74%), Gaps = 2/587 (0%)
Frame = +1
Query: 24 QTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGIN 83
+ V + A +AE F + WL+ YGYL P D R S L SA+ +QSA++ MQQFYGI
Sbjct: 187 RAAVAVAVARADEAEAPFAGQNWLKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIP 366
Query: 84 MTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKV 143
+TG +D+ TI+WMKKPRCGVPD S + R KRYALTGQKW+ KHI YSI N TPKV
Sbjct: 367 VTGVLDQTTIEWMKKPRCGVPDHPHLSRRR--RNKRYALTGQKWRQKHITYSIHNYTPKV 540
Query: 144 GDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEG 203
G+ +TRKAIR+AFDVWQ VTPLTFEEVPY E+++ +++ DI I FASGFHGDSSPFDGEG
Sbjct: 541 GELDTRKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEG 720
Query: 204 GFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAI 263
GFLAHAYFPGPGIGGDTHFDSDEPWTLGN NHDGNDLFLVAVHELGHALGLEHS+DP+AI
Sbjct: 721 GFLAHAYFPGPGIGGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSSDPSAI 900
Query: 264 MAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXX 323
MAPFYQYMET NFKLP DDLQGIQKIYG R P+
Sbjct: 901 MAPFYQYMETHNFKLPQDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPS-ERKHERQ 1077
Query: 324 XXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQI 383
S PG KPNICDGNFNT+ + R EMFVFKD+WFWR+RNNRV +GYPMQI
Sbjct: 1078PRPPRPPLGDRPSTPGTKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQI 1257
Query: 384 TYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDS 443
FW+GLP IDA YE ++G FVFFK +K+WVFK+ T++PGYPH L LGS +P GID+
Sbjct: 1258EQFWKGLPARIDAAYERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDT 1437
Query: 444 AIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYF 503
A+ WE VGKTYFFKG+RYWRY EE R+ DPGYPKPIT+WKGIP++PQGAF+ KE +TYF
Sbjct: 1438ALRWEPVGKTYFFKGERYWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKEGYYTYF 1617
Query: 504 IKEKSTGN-STKMLRVEPGYPRSILKDFMGCD-GPTDRDKDRHSPQDDVDIIIKLDNTAS 561
K + + L VEPGYPR+IL+D+MGC+ +R K+R PQDDVDI++ +++
Sbjct: 1618YKGRDYWKFDNQKLSVEPGYPRNILRDWMGCNQKEVERRKERRLPQDDVDIMVTINDVPG 1797
Query: 562 TVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
+V A+A+VIPCIL+LC+LVLVYT+FQFK + P+ + Y KR +QEWV
Sbjct: 1798SVNAVAVVIPCILSLCILVLVYTIFQFKNKTGPQPVTYYKRPVQEWV 1938
>dbj|AB021227.1|AB021227 Homo sapiens mRNA for membrane-type-5 matrix metalloproteinase,
complete cds
Length = 2623
Score = 765 bits (1976), Expect = 0.0
Identities = 366/587 (62%), Positives = 439/587 (74%), Gaps = 2/587 (0%)
Frame = +1
Query: 24 QTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGIN 83
+ V + A +AE F + WL+ YGYL P D R S L SA+ +QSA++ MQQFYGI
Sbjct: 187 RAAVAVAVARADEAEAPFAGQNWLKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIP 366
Query: 84 MTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKV 143
+TG +D+ TI+WMKKPRCGVPD S + R KRYALTGQKW+ KHI YSI N TPKV
Sbjct: 367 VTGVLDQTTIEWMKKPRCGVPDHPHLSRRR--RNKRYALTGQKWRQKHITYSIHNYTPKV 540
Query: 144 GDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEG 203
G+ +TRKAIR+AFDVWQ VTPLTFEEVPY E+++ +++ DI I FASGFHGDSSPFDGEG
Sbjct: 541 GELDTRKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEG 720
Query: 204 GFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAI 263
GFLAHAYFPGPGIGGDTHFDSDEPWTLGN NHDGNDLFLVAVHELGHALGLEHS+DP+AI
Sbjct: 721 GFLAHAYFPGPGIGGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSSDPSAI 900
Query: 264 MAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXX 323
MAPFYQYMET NFKLP DDLQGIQKIYG R P+
Sbjct: 901 MAPFYQYMETHNFKLPQDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPS-ERKHERQ 1077
Query: 324 XXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQI 383
S PG KPNICDGNFNT+ + R EMFVFKD+WFWR+RNNRV +GYPMQI
Sbjct: 1078PRPPRPPLGDRPSTPGTKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQI 1257
Query: 384 TYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDS 443
FW+GLP IDA YE ++G FVFFK +K+WVFK+ T++PGYPH L LGS +P GID+
Sbjct: 1258EQFWKGLPARIDAAYERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDT 1437
Query: 444 AIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYF 503
A+ WE VGKTYFFKG+RYWRY EE R+ DPGYPKPIT+WKGIP++PQGAF+ KE +TYF
Sbjct: 1438ALRWEPVGKTYFFKGERYWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKEGYYTYF 1617
Query: 504 IKEKSTGN-STKMLRVEPGYPRSILKDFMGCD-GPTDRDKDRHSPQDDVDIIIKLDNTAS 561
K + + L VEPGYPR+IL+D+MGC+ +R K+R PQDDVDI++ +++
Sbjct: 1618YKGRDYWKFDNQKLSVEPGYPRNILRDWMGCNQKEVERRKERRLPQDDVDIMVTINDVPG 1797
Query: 562 TVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
+V A+A+VIPCIL+LC+LVLVYT+FQFK + P+ + Y KR +QEWV
Sbjct: 1798SVNAVAVVIPCILSLCILVLVYTIFQFKNKTGPQPVTYYKRPVQEWV 1938
>gb|AF131284.1|AF131284 Homo sapiens membrane type 5 matrix metalloproteinase (MMP24) mRNA,
complete cds
Length = 2118
Score = 765 bits (1976), Expect = 0.0
Identities = 366/587 (62%), Positives = 439/587 (74%), Gaps = 2/587 (0%)
Frame = +1
Query: 24 QTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGIN 83
+ V + A +AE F + WL+ YGYL P D R S L SA+ +QSA++ MQQFYGI
Sbjct: 184 RAAVAVAVARADEAEAPFAGQNWLKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIP 363
Query: 84 MTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKV 143
+TG +D+ TI+WMKKPRCGVPD S + R KRYALTGQKW+ KHI YSI N TPKV
Sbjct: 364 VTGVLDQTTIEWMKKPRCGVPDHPHLSRRR--RNKRYALTGQKWRQKHITYSIHNYTPKV 537
Query: 144 GDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEG 203
G+ +TRKAIR+AFDVWQ VTPLTFEEVPY E+++ +++ DI I FASGFHGDSSPFDGEG
Sbjct: 538 GELDTRKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEG 717
Query: 204 GFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAI 263
GFLAHAYFPGPGIGGDTHFDSDEPWTLGN NHDGNDLFLVAVHELGHALGLEHS+DP+AI
Sbjct: 718 GFLAHAYFPGPGIGGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSSDPSAI 897
Query: 264 MAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXX 323
MAPFYQYMET NFKLP DDLQGIQKIYG R P+
Sbjct: 898 MAPFYQYMETHNFKLPQDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPS-ERKHERQ 1074
Query: 324 XXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQI 383
S PG KPNICDGNFNT+ + R EMFVFKD+WFWR+RNNRV +GYPMQI
Sbjct: 1075PRPPRPPLGDRPSTPGTKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQI 1254
Query: 384 TYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDS 443
FW+GLP IDA YE ++G FVFFK +K+WVFK+ T++PGYPH L LGS +P GID+
Sbjct: 1255EQFWKGLPARIDAAYERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDT 1434
Query: 444 AIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYF 503
A+ WE VGKTYFFKG+RYWRY EE R+ DPGYPKPIT+WKGIP++PQGAF+ KE +TYF
Sbjct: 1435ALRWEPVGKTYFFKGERYWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKEGYYTYF 1614
Query: 504 IKEKSTGN-STKMLRVEPGYPRSILKDFMGCD-GPTDRDKDRHSPQDDVDIIIKLDNTAS 561
K + + L VEPGYPR+IL+D+MGC+ +R K+R PQDDVDI++ +++
Sbjct: 1615YKGRDYWKFDNQKLSVEPGYPRNILRDWMGCNQKEVERRKERRLPQDDVDIMVTINDVPG 1794
Query: 562 TVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
+V A+A+VIPCIL+LC+LVLVYT+FQFK + P+ + Y KR +QEWV
Sbjct: 1795SVNAVAVVIPCILSLCILVLVYTIFQFKNKTGPQPVTYYKRPVQEWV 1935
>ref|XM_047216.1| Homo sapiens matrix metalloproteinase 24 (membrane-inserted)
(MMP24), mRNA
Length = 2464
Score = 765 bits (1976), Expect = 0.0
Identities = 366/587 (62%), Positives = 439/587 (74%), Gaps = 2/587 (0%)
Frame = +1
Query: 24 QTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGIN 83
+ V + A +AE F + WL+ YGYL P D R S L SA+ +QSA++ MQQFYGI
Sbjct: 25 RAAVAVAVARADEAEAPFAGQNWLKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIP 204
Query: 84 MTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKV 143
+TG +D+ TI+WMKKPRCGVPD S + R KRYALTGQKW+ KHI YSI N TPKV
Sbjct: 205 VTGVLDQTTIEWMKKPRCGVPDHPHLSRRR--RNKRYALTGQKWRQKHITYSIHNYTPKV 378
Query: 144 GDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEG 203
G+ +TRKAIR+AFDVWQ VTPLTFEEVPY E+++ +++ DI I FASGFHGDSSPFDGEG
Sbjct: 379 GELDTRKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEG 558
Query: 204 GFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAI 263
GFLAHAYFPGPGIGGDTHFDSDEPWTLGN NHDGNDLFLVAVHELGHALGLEHS+DP+AI
Sbjct: 559 GFLAHAYFPGPGIGGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSSDPSAI 738
Query: 264 MAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXX 323
MAPFYQYMET NFKLP DDLQGIQKIYG R P+
Sbjct: 739 MAPFYQYMETHNFKLPQDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPS-ERKHERQ 915
Query: 324 XXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQI 383
S PG KPNICDGNFNT+ + R EMFVFKD+WFWR+RNNRV +GYPMQI
Sbjct: 916 PRPPRPPLGDRPSTPGTKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQI 1095
Query: 384 TYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDS 443
FW+GLP IDA YE ++G FVFFK +K+WVFK+ T++PGYPH L LGS +P GID+
Sbjct: 1096EQFWKGLPARIDAAYERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDT 1275
Query: 444 AIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYF 503
A+ WE VGKTYFFKG+RYWRY EE R+ DPGYPKPIT+WKGIP++PQGAF+ KE +TYF
Sbjct: 1276ALRWEPVGKTYFFKGERYWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKEGYYTYF 1455
Query: 504 IKEKSTGN-STKMLRVEPGYPRSILKDFMGCD-GPTDRDKDRHSPQDDVDIIIKLDNTAS 561
K + + L VEPGYPR+IL+D+MGC+ +R K+R PQDDVDI++ +++
Sbjct: 1456YKGRDYWKFDNQKLSVEPGYPRNILRDWMGCNQKEVERRKERRLPQDDVDIMVTINDVPG 1635
Query: 562 TVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
+V A+A+VIPCIL+LC+LVLVYT+FQFK + P+ + Y KR +QEWV
Sbjct: 1636SVNAVAVVIPCILSLCILVLVYTIFQFKNKTGPQPVTYYKRPVQEWV 1776
>dbj|AB021226.1|AB021226 Mus musculus mRNA for membrane-type-5 matrix metalloproteinase,
complete cds
Length = 4246
Score = 763 bits (1969), Expect = 0.0
Identities = 362/574 (63%), Positives = 432/574 (75%), Gaps = 2/574 (0%)
Frame = +3
Query: 37 AEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWM 96
A+ F + WL+ YGYL P + R S L S + +QSA++ MQQFYGI +TG +D+ TI+WM
Sbjct: 216 ADAPFAGQNWLKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWM 395
Query: 97 KKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAF 156
KKPRCGVPD S + R KRYALTGQKW+ KHI YSI N TPKVG+ +TRKAIR+AF
Sbjct: 396 KKPRCGVPDHPHLSRRR--RNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQAF 569
Query: 157 DVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGI 216
DVWQ VTPLTFEEVPY E+++ +++ DI I FASGFHGDSSPFDGEGGFLAHAYFPGPGI
Sbjct: 570 DVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGI 749
Query: 217 GGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNF 276
GGDTHFDSDEPWTLGN NHDGNDLFLVAVHELGHALGLEHSNDP+AIMAPFYQYMET NF
Sbjct: 750 GGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNF 929
Query: 277 KLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXS 336
KLP DDLQGIQKIYG R P+ S
Sbjct: 930 KLPQDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPS-ERKHERHPRPPRPPLGDRPS 1106
Query: 337 YPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDA 396
PGAKPNICDGNFNT+ + R EMFVFKD+WFWR+RNNRV +GYPMQI FW+GLP IDA
Sbjct: 1107TPGAKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDA 1286
Query: 397 VYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YE ++G FVFFK +K+WVFK+ T++PGYPH L LGS +P GID+A+ WE VGKTYFF
Sbjct: 1287AYERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTYFF 1466
Query: 457 KGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGN-STKM 515
KG+RYWRY EE R+ DPGYPKPIT+WKGIP++PQGAF+ KE +TYF K + +
Sbjct: 1467KGERYWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKEGYYTYFYKGRDYWKFDNQK 1646
Query: 516 LRVEPGYPRSILKDFMGC-DGPTDRDKDRHSPQDDVDIIIKLDNTASTVKAIAIVIPCIL 574
L VEPGYPR+IL+D+MGC +R K+R PQDDVDI++ +D+ +V A+A+V+PC L
Sbjct: 1647LSVEPGYPRNILRDWMGCKQKEVERRKERRLPQDDVDIMVTIDDVPGSVNAVAVVVPCTL 1826
Query: 575 ALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
+LCLLVL+YT+FQFK + P+ + Y KR +QEWV
Sbjct: 1827SLCLLVLLYTIFQFKNKAGPQPVTYYKRPVQEWV 1928
>ref|NM_031757.1| Rattus norvegicus matrix metalloproteinase 24 (membrane-inserted)
(Mmp24), mRNA
Length = 4245
Score = 762 bits (1967), Expect = 0.0
Identities = 362/574 (63%), Positives = 432/574 (75%), Gaps = 2/574 (0%)
Frame = +3
Query: 37 AEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWM 96
A+ F + WL+ YGYL P + R S L S + +QSA++ MQQFYGI +TG +D+ TI+WM
Sbjct: 243 ADAPFAGQNWLKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWM 422
Query: 97 KKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAF 156
KKPRCGVPD S + R KRYALTGQKW+ KHI YSI N TPKVG+ +TRKAIR+AF
Sbjct: 423 KKPRCGVPDHPHLSRRR--RNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQAF 596
Query: 157 DVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGI 216
DVWQ VTPLTFEEVPY E+++ +++ DI I FASGFHGDSSPFDGEGGFLAHAYFPGPGI
Sbjct: 597 DVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGI 776
Query: 217 GGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNF 276
GGDTHFDSDEPWTLGN NHDGNDLFLVAVHELGHALGLEHSNDP+AIMAPFYQYMET NF
Sbjct: 777 GGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNF 956
Query: 277 KLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXS 336
KLP DDLQGIQKIYG R P+ S
Sbjct: 957 KLPQDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPS-ERKHERQPRPPRPPLGDRPS 1133
Query: 337 YPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDA 396
PGAKPNICDGNFNT+ + R EMFVFKD+WFWR+RNNRV +GYPMQI FW+GLP IDA
Sbjct: 1134TPGAKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDA 1313
Query: 397 VYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YE ++G FVFFK +K+WVFK+ T++PGYPH L LGS +P GID+A+ WE VGKTYFF
Sbjct: 1314AYERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTYFF 1493
Query: 457 KGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGN-STKM 515
KG+RYWRY EE R+ DPGYPKPIT+WKGIP++PQGAF+ KE +TYF K + +
Sbjct: 1494KGERYWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKEGYYTYFYKGRDYWKFDNQK 1673
Query: 516 LRVEPGYPRSILKDFMGC-DGPTDRDKDRHSPQDDVDIIIKLDNTASTVKAIAIVIPCIL 574
L VEPGYPR+IL+D+MGC +R K+R PQDDVDI++ +D+ +V A+A+V+PC L
Sbjct: 1674LSVEPGYPRNILRDWMGCKQKEVERRKERRLPQDDVDIMVTIDDVPGSVNAVAVVVPCTL 1853
Query: 575 ALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
+LCLLVL+YT+FQFK + P+ + Y KR +QEWV
Sbjct: 1854SLCLLVLLYTIFQFKNKTGPQPVTYYKRPVQEWV 1955
>dbj|AB023659.1|AB023659 Rattus norvegicus mt5-mmp mRNA for membrane-type matrix
metalloproteinase 5, complete cds
Length = 4245
Score = 762 bits (1967), Expect = 0.0
Identities = 362/574 (63%), Positives = 432/574 (75%), Gaps = 2/574 (0%)
Frame = +3
Query: 37 AEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWM 96
A+ F + WL+ YGYL P + R S L S + +QSA++ MQQFYGI +TG +D+ TI+WM
Sbjct: 243 ADAPFAGQNWLKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWM 422
Query: 97 KKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAF 156
KKPRCGVPD S + R KRYALTGQKW+ KHI YSI N TPKVG+ +TRKAIR+AF
Sbjct: 423 KKPRCGVPDHPHLSRRR--RNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQAF 596
Query: 157 DVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGI 216
DVWQ VTPLTFEEVPY E+++ +++ DI I FASGFHGDSSPFDGEGGFLAHAYFPGPGI
Sbjct: 597 DVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGI 776
Query: 217 GGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNF 276
GGDTHFDSDEPWTLGN NHDGNDLFLVAVHELGHALGLEHSNDP+AIMAPFYQYMET NF
Sbjct: 777 GGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNF 956
Query: 277 KLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXS 336
KLP DDLQGIQKIYG R P+ S
Sbjct: 957 KLPQDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPS-ERKHERQPRPPRPPLGDRPS 1133
Query: 337 YPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDA 396
PGAKPNICDGNFNT+ + R EMFVFKD+WFWR+RNNRV +GYPMQI FW+GLP IDA
Sbjct: 1134TPGAKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDA 1313
Query: 397 VYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YE ++G FVFFK +K+WVFK+ T++PGYPH L LGS +P GID+A+ WE VGKTYFF
Sbjct: 1314AYERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTYFF 1493
Query: 457 KGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGN-STKM 515
KG+RYWRY EE R+ DPGYPKPIT+WKGIP++PQGAF+ KE +TYF K + +
Sbjct: 1494KGERYWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKEGYYTYFYKGRDYWKFDNQK 1673
Query: 516 LRVEPGYPRSILKDFMGC-DGPTDRDKDRHSPQDDVDIIIKLDNTASTVKAIAIVIPCIL 574
L VEPGYPR+IL+D+MGC +R K+R PQDDVDI++ +D+ +V A+A+V+PC L
Sbjct: 1674LSVEPGYPRNILRDWMGCKQKEVERRKERRLPQDDVDIMVTIDDVPGSVNAVAVVVPCTL 1853
Query: 575 ALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
+LCLLVL+YT+FQFK + P+ + Y KR +QEWV
Sbjct: 1854SLCLLVLLYTIFQFKNKTGPQPVTYYKRPVQEWV 1955
>ref|NM_010808.1| Mus musculus matrix metalloproteinase 24 (Mmp24), mRNA
Length = 2202
Score = 753 bits (1943), Expect = 0.0
Identities = 358/566 (63%), Positives = 426/566 (75%), Gaps = 3/566 (0%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL+ YGYL P + R S L S + +QSA++ MQQFYGI +TG +D+ TI+WMKKPRCGVPD
Sbjct: 244 WLKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKPRCGVPD 423
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
S + R KRYALTGQKW+ KHI YSI N TPKVG+ +TRKAIR+AFDVWQ VTPL
Sbjct: 424 HPHLSRRR--RNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQAFDVWQKVTPL 597
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
TFEEVPY E+++ +++ DI I FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD
Sbjct: 598 TFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 777
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
EPWTLGN NHDGNDLFLVAVHELGHALGLEHSNDP+AIMAPFYQYMET NFKLP DDLQG
Sbjct: 778 EPWTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFKLPQDDLQG 957
Query: 286 IQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNIC 345
IQKIYG R P+ S PGAKPNIC
Sbjct: 958 IQKIYGPPAEPSGATRPLPTLPVRRIHSPS--EKKHERHPRPPRRPWGRPSTPGAKPNIC 1131
Query: 346 DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNF 405
DGNFNT+ + R EMFVFKD+WFWR+RNNRV +GYPMQI FW+GLP IDA YE ++G F
Sbjct: 1132DGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDAAYERADGRF 1311
Query: 406 VFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHG-IDSAIWWEDVGKTYFFKGDRYWRY 464
VFFK +K+WVFK+ T++PGYPH L LGS +P G D+A+ WE VGKTYFFKG+RYWRY
Sbjct: 1312VFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGKPDTALRWEPVGKTYFFKGERYWRY 1491
Query: 465 GEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGN-STKMLRVEPGYP 523
EE R+ DPGYPKPIT+WKGIP++PQGAF+ KE +TYF K + + L VEPGYP
Sbjct: 1492SEERRATDPGYPKPITVWKGIPQAPQGAFLSKEGYYTYFYKGRDYWKFDNQKLSVEPGYP 1671
Query: 524 RSILKDFMGC-DGPTDRDKDRHSPQDDVDIIIKLDNTASTVKAIAIVIPCILALCLLVLV 582
R+IL+D+MGC +R K+R PQDDVDI++ +D+ +V A+A+V+PC L+LCL VL+
Sbjct: 1672RNILRDWMGCKQKEVERRKERRLPQDDVDIMVTIDDVPGSVNAVAVVVPCTLSLCLRVLL 1851
Query: 583 YTVFQFKREGTPRHILYCKRSMQEWV 608
YT+FQFK + P+ + Y KR +QEWV
Sbjct: 1852YTIFQFKNKAGPQPVTYYKRPVQEWV 1929
>emb|AJ010262.1|MMU010262 Mus musculus mRNA for membrane-type matrix metalloproteinase 5
Length = 2202
Score = 753 bits (1943), Expect = 0.0
Identities = 358/566 (63%), Positives = 426/566 (75%), Gaps = 3/566 (0%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL+ YGYL P + R S L S + +QSA++ MQQFYGI +TG +D+ TI+WMKKPRCGVPD
Sbjct: 244 WLKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKPRCGVPD 423
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
S + R KRYALTGQKW+ KHI YSI N TPKVG+ +TRKAIR+AFDVWQ VTPL
Sbjct: 424 HPHLSRRR--RNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQAFDVWQKVTPL 597
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
TFEEVPY E+++ +++ DI I FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD
Sbjct: 598 TFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 777
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
EPWTLGN NHDGNDLFLVAVHELGHALGLEHSNDP+AIMAPFYQYMET NFKLP DDLQG
Sbjct: 778 EPWTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFKLPQDDLQG 957
Query: 286 IQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNIC 345
IQKIYG R P+ S PGAKPNIC
Sbjct: 958 IQKIYGPPAEPSGATRPLPTLPVRRIHSPS--EKKHERHPRPPRRPWGRPSTPGAKPNIC 1131
Query: 346 DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNF 405
DGNFNT+ + R EMFVFKD+WFWR+RNNRV +GYPMQI FW+GLP IDA YE ++G F
Sbjct: 1132DGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDAAYERADGRF 1311
Query: 406 VFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHG-IDSAIWWEDVGKTYFFKGDRYWRY 464
VFFK +K+WVFK+ T++PGYPH L LGS +P G D+A+ WE VGKTYFFKG+RYWRY
Sbjct: 1312VFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGKPDTALRWEPVGKTYFFKGERYWRY 1491
Query: 465 GEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGN-STKMLRVEPGYP 523
EE R+ DPGYPKPIT+WKGIP++PQGAF+ KE +TYF K + + L VEPGYP
Sbjct: 1492SEERRATDPGYPKPITVWKGIPQAPQGAFLSKEGYYTYFYKGRDYWKFDNQKLSVEPGYP 1671
Query: 524 RSILKDFMGC-DGPTDRDKDRHSPQDDVDIIIKLDNTASTVKAIAIVIPCILALCLLVLV 582
R+IL+D+MGC +R K+R PQDDVDI++ +D+ +V A+A+V+PC L+LCL VL+
Sbjct: 1672RNILRDWMGCKQKEVERRKERRLPQDDVDIMVTIDDVPGSVNAVAVVVPCTLSLCLRVLL 1851
Query: 583 YTVFQFKREGTPRHILYCKRSMQEWV 608
YT+FQFK + P+ + Y KR +QEWV
Sbjct: 1852YTIFQFKNKAGPQPVTYYKRPVQEWV 1929
>ref|NM_022564.1| Homo sapiens matrix metalloproteinase 16 (membrane-inserted)
(MMP16), transcript variant 2, mRNA
Length = 1644
Score = 726 bits (1875), Expect = 0.0
Identities = 353/409 (86%), Positives = 358/409 (87%)
Frame = +2
Query: 1 MIVLALSTGSRLDFVSQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRM 60
MI+L STG RLDFV S V FLQT +WILCATVC EQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 113 MILLTFSTGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 292
Query: 61 SVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSA+AAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKF+IRRKRY
Sbjct: 293 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFHIRRKRY 472
Query: 121 ALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKR 180
ALTGQKWQHKHI YSIKNVTPKVGD ETRKAIRRAFDVWQNVTPLTFEEVPY ELENGKR
Sbjct: 473 ALTGQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKR 652
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 653 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 832
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 833 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 1012
Query: 301 XXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMF 360
HRSIPPA SYPGAKPNICDGNFNTL ILRREMF
Sbjct: 1013RPLPTVPPHRSIPPA--DPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMF 1186
Query: 361 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFK 409
VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS+GNFVFFK
Sbjct: 1187VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFK 1333
>dbj|D83647.1|HUMMETALLA Homo sapiens mRNA for metalloproteinase, complete cds
Length = 1532
Score = 726 bits (1875), Expect = 0.0
Identities = 353/409 (86%), Positives = 358/409 (87%)
Frame = +1
Query: 1 MIVLALSTGSRLDFVSQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRM 60
MI+L STG RLDFV S V FLQT +WILCATVC EQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 1 MILLTFSTGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 180
Query: 61 SVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSA+AAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKF+IRRKRY
Sbjct: 181 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFHIRRKRY 360
Query: 121 ALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKR 180
ALTGQKWQHKHI YSIKNVTPKVGD ETRKAIRRAFDVWQNVTPLTFEEVPY ELENGKR
Sbjct: 361 ALTGQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKR 540
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 541 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 720
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 721 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 900
Query: 301 XXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMF 360
HRSIPPA SYPGAKPNICDGNFNTL ILRREMF
Sbjct: 901 RPLPTVPPHRSIPPA--DPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMF 1074
Query: 361 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFK 409
VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS+GNFVFFK
Sbjct: 1075VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFK 1221
>dbj|AB047651.1|AB047651 Oryzias latipes MT5-MMP mRNA for membrane type-5 matrix
metalloproteinase, complete cds
Length = 2323
Score = 707 bits (1826), Expect = 0.0
Identities = 340/578 (58%), Positives = 417/578 (71%), Gaps = 12/578 (2%)
Frame = +2
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
+ WL+ YGYL P + + S L + M SA+AAMQ+FYGI +TG +D T+ WM PRCG
Sbjct: 182 IPTWLRNYGYLRPHNNQTSDLEQEKAMHSALAAMQRFYGIPVTGILDETTMQWMWTPRCG 361
Query: 103 VPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNV 162
VPDQ S + R KRYALTGQKW+ K I+YSI N TPKVG +T++AIR+AF VWQ V
Sbjct: 362 VPDQPHTSRRQ--RNKRYALTGQKWREKKISYSISNYTPKVGQKDTQRAIRQAFSVWQMV 535
Query: 163 TPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPL+F+EVPY E++ ++ DI I FASGFHGDSSPFDGEGGFLAHAYFPG GIGGDTHF
Sbjct: 536 TPLSFQEVPYSEIKKEGKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGAGIGGDTHF 715
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDD 282
DSDEPWTLGNP+ DGNDLFLVAVHELGHALGLEHSNDP+AIMAPFYQYM+T +F+LP DD
Sbjct: 716 DSDEPWTLGNPSSDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMDTRDFQLPLDD 895
Query: 283 LQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG-AK 341
LQGIQKIYG R+ + + PG K
Sbjct: 896 LQGIQKIYGVPTAMLEPTRPLPTLPSRRT--HSTSDRKHDRNSRPARPHSDRPALPGNGK 1069
Query: 342 PNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 401
PN+CDGNFNT+ RREMFVFKD+WFWR+RNN+V +GYPMQI FW+GLPP IDA YE S
Sbjct: 1070PNVCDGNFNTVAFFRREMFVFKDRWFWRLRNNKVQEGYPMQIDQFWKGLPPRIDAAYERS 1249
Query: 402 EGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRY 461
+G FVFFK +KFWVFK+ + +PGYP L+ LG +P GID+A+ WE VGKTYFFKGD+Y
Sbjct: 1250DGKFVFFKGDKFWVFKEVSAEPGYPQSLLELGRSLPKEGIDTALRWEPVGKTYFFKGDQY 1429
Query: 462 WRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGN-STKMLRVEP 520
WRY EE ++DPGYPKPI++WKGIPE+PQGAF++++ +TYF K K + L VEP
Sbjct: 1430WRYNEERSTVDPGYPKPISVWKGIPEAPQGAFINRDGYYTYFYKGKDYWKFDNQKLTVEP 1609
Query: 521 GYPRSILKDFMGCDGPTDRDK-----DRHSPQDDVDIIIKLDNTASTVKAIAIVIPCILA 575
GYP+SIL+D+MGCD DR P D+VDI++ +++ +TV AIA+VIPC+L+
Sbjct: 1610GYPKSILRDWMGCDQSDIEHSGGNRGDRQLPLDNVDIMVTINDVPTTVNAIAVVIPCVLS 1789
Query: 576 LCLLVLVYTVFQFKREGT-----PRHILYCKRSMQEWV 608
LC+LVLVYT+ QFK +G P+H Y K +QEWV
Sbjct: 1790LCILVLVYTIVQFKNKGVQQNSIPQH--YYKYQVQEWV 1897
>ref|NM_031056.1| Rattus norvegicus matrix metalloproteinase 14, membrane-inserted
(Mmp14), mRNA
Length = 2448
Score = 630 bits (1625), Expect = e-178
Identities = 309/596 (51%), Positives = 407/596 (67%), Gaps = 3/596 (0%)
Frame = +2
Query: 16 SQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAA 75
S+S +L L T L + F+ E WLQ+YGYLPP D R RS +++ +AIAA
Sbjct: 185 SRSLLLPLLTLGTTLASLGWAQSSNFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAA 364
Query: 76 MQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYS 135
MQ+FYG+ +TGK D +T+ M++PRCGVPD+ K N+RRKRYA+ G KWQH I +
Sbjct: 365 MQRFYGLQVTGKADSDTMKAMRRPRCGVPDKFGTEIKANVRRKRYAIQGLKWQHNEITFC 544
Query: 136 IKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENG-KRDVDITIIFASGFHG 194
I+N TPKVG+ T +AIR+AF VW++ TPL F EVPY + G ++ DI I+FA GFHG
Sbjct: 545 IQNYTPKVGEYATFEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHG 724
Query: 195 DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGL 254
DS+PFDGEGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGL
Sbjct: 725 DSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGL 904
Query: 255 EHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPP 314
EHSNDP+AIMAPFYQ+M+T+NF LP+DD +GIQ++YG S+P
Sbjct: 905 EHSNDPSAIMAPFYQWMDTENFVLPDDDRRGIQQLYGSKSGSPTKMPPQPRTTSRPSVPD 1084
Query: 315 AXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNR 374
P PNICDGNF+T+ +LR EMFVFK++WFWRVRNN+
Sbjct: 1085KPRN-------------------PTYGPNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQ 1207
Query: 375 VMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGS 434
VMDGYPM I FWRGLP SI+ YE +G FVFFK +K WVF + +L+PGYP + LG
Sbjct: 1208VMDGYPMPIGQFWRGLPASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGR 1387
Query: 435 GIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFV 494
G+P+ ID+A++W GKTYFF+G++Y+R+ EE R++D YPK I +W+GIPESP+G+F+
Sbjct: 1388GLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEEFRAVDSEYPKNIKVWEGIPESPRGSFM 1567
Query: 495 HKENGFTYFIK-EKSTGNSTKMLRVEPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDII 553
+ FTYF K K + + L+VEPGYP+S L+D+MGC P+ D + ++ II
Sbjct: 1568GSDEVFTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGC--PSGGRPDEGTEEETEVII 1741
Query: 554 IKLDNTAS-TVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
I++D S V A A+V+P +L L +L + VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1742IEVDEEGSGAVSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1909
>emb|X91785.1|RNMTMMPGN R.norvegicus mRNA for membrane-type metalloproteinase
Length = 2448
Score = 630 bits (1625), Expect = e-178
Identities = 309/596 (51%), Positives = 407/596 (67%), Gaps = 3/596 (0%)
Frame = +2
Query: 16 SQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAA 75
S+S +L L T L + F+ E WLQ+YGYLPP D R RS +++ +AIAA
Sbjct: 185 SRSLLLPLLTLGTTLASLGWAQSSNFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAA 364
Query: 76 MQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYS 135
MQ+FYG+ +TGK D +T+ M++PRCGVPD+ K N+RRKRYA+ G KWQH I +
Sbjct: 365 MQRFYGLQVTGKADSDTMKAMRRPRCGVPDKFGTEIKANVRRKRYAIQGLKWQHNEITFC 544
Query: 136 IKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENG-KRDVDITIIFASGFHG 194
I+N TPKVG+ T +AIR+AF VW++ TPL F EVPY + G ++ DI I+FA GFHG
Sbjct: 545 IQNYTPKVGEYATFEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHG 724
Query: 195 DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGL 254
DS+PFDGEGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGL
Sbjct: 725 DSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGL 904
Query: 255 EHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPP 314
EHSNDP+AIMAPFYQ+M+T+NF LP+DD +GIQ++YG S+P
Sbjct: 905 EHSNDPSAIMAPFYQWMDTENFVLPDDDRRGIQQLYGSKSGSPTKMPPQPRTTSRPSVPD 1084
Query: 315 AXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNR 374
P PNICDGNF+T+ +LR EMFVFK++WFWRVRNN+
Sbjct: 1085KPRN-------------------PTYGPNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQ 1207
Query: 375 VMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGS 434
VMDGYPM I FWRGLP SI+ YE +G FVFFK +K WVF + +L+PGYP + LG
Sbjct: 1208VMDGYPMPIGQFWRGLPASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGR 1387
Query: 435 GIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFV 494
G+P+ ID+A++W GKTYFF+G++Y+R+ EE R++D YPK I +W+GIPESP+G+F+
Sbjct: 1388GLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEEFRAVDSEYPKNIKVWEGIPESPRGSFM 1567
Query: 495 HKENGFTYFIK-EKSTGNSTKMLRVEPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDII 553
+ FTYF K K + + L+VEPGYP+S L+D+MGC P+ D + ++ II
Sbjct: 1568GSDEVFTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGC--PSGGRPDEGTEEETEVII 1741
Query: 554 IKLDNTAS-TVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
I++D S V A A+V+P +L L +L + VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1742IEVDEEGSGAVSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1909
>gb|U54984.1|MMU54984 Mus musculus membrane-type matrix metalloproteinase 1 mRNA,
complete cds
Length = 2583
Score = 629 bits (1623), Expect = e-178
Identities = 309/596 (51%), Positives = 407/596 (67%), Gaps = 3/596 (0%)
Frame = +1
Query: 16 SQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAA 75
S+S +L L T L + F+ E WLQ+YGYLPP D R RS +++ +AIAA
Sbjct: 268 SRSLLLPLLTLGTALASLGWAQGSNFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAA 447
Query: 76 MQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYS 135
MQ+FYG+ +TGK D T+ M++PRCGVPD+ K N+RRKRYA+ G KWQH I +
Sbjct: 448 MQKFYGLQVTGKADLATMMAMRRPRCGVPDKFGTEIKANVRRKRYAIQGLKWQHNEITFC 627
Query: 136 IKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENG-KRDVDITIIFASGFHG 194
I+N TPKVG+ T +AIR+AF VW++ TPL F EVPY + G ++ DI I+FA GFHG
Sbjct: 628 IQNYTPKVGEYATFEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHG 807
Query: 195 DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGL 254
DS+PFDGEGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGL
Sbjct: 808 DSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGL 987
Query: 255 EHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPP 314
EHSNDP+AIM+PFYQ+M+T+NF LP+DD +GIQ++YG S+P
Sbjct: 988 EHSNDPSAIMSPFYQWMDTENFVLPDDDRRGIQQLYGSKSGSPTKMPPQPRTTSRPSVPD 1167
Query: 315 AXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNR 374
P PNICDGNF+T+ +LR EMFVFK++WFWRVRNN+
Sbjct: 1168KPKN-------------------PAYGPNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQ 1290
Query: 375 VMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGS 434
VMDGYPM I FWRGLP SI+ YE +G FVFFK +K WVF + +L+PGYP + LG
Sbjct: 1291VMDGYPMPIGQFWRGLPASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGR 1470
Query: 435 GIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFV 494
G+P+ ID+A++W GKTYFF+G++Y+R+ EE R++D YPK I +W+GIPESP+G+F+
Sbjct: 1471GLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEEFRAVDSEYPKNIKVWEGIPESPRGSFM 1650
Query: 495 HKENGFTYFIK-EKSTGNSTKMLRVEPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDII 553
+ FTYF K K + + L+VEPGYP+S L+D+MGC P+ R D + ++ II
Sbjct: 1651GSDEVFTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGC--PSGRRPDEGTEEETEVII 1824
Query: 554 IKLDNTAS-TVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
I++D S V A A+V+P +L L +L + VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1825IEVDEEGSGAVSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1992
>ref|NM_004995.2| Homo sapiens matrix metalloproteinase 14 (membrane-inserted)
(MMP14), mRNA
Length = 3558
Score = 627 bits (1617), Expect = e-177
Identities = 302/571 (52%), Positives = 397/571 (68%), Gaps = 3/571 (0%)
Frame = +1
Query: 41 FNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPR 100
F+ E WLQ+YGYLPP D R RS +++ +AIAAMQ+FYG+ +TGK D +T+ M++PR
Sbjct: 331 FSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPR 510
Query: 101 CGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
CGVPD+ K N+RRKRYA+ G KWQH I + I+N TPKVG+ T +AIR+AF VW+
Sbjct: 511 CGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATYEAIRKAFRVWE 690
Query: 161 NVTPLTFEEVPYIELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+ TPL F EVPY + G ++ DI I FA GFHGDS+PFDGEGGFLAHAYFPGP IGGD
Sbjct: 691 SATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGD 870
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
THFDS EPWT+ N + +GND+FLVAVHELGHALGLEHS+DP+AIMAPFYQ+M+T+NF LP
Sbjct: 871 THFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTENFVLP 1050
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
+DD +GIQ++YG S+P P
Sbjct: 1051DDDRRGIQQLYGGESGFPTKMPPQPRTTSRPSVP-------------------DKPKNPT 1173
Query: 340 AKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
PNICDGNF+T+ +LR EMFVFK++WFWRVRNN+VMDGYPM I FWRGLP SI+ YE
Sbjct: 1174YGPNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYE 1353
Query: 400 NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGD 459
+G FVFFK +K WVF + +L+PGYP + LG G+P+ ID+A++W GKTYFF+G+
Sbjct: 1354RKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGN 1533
Query: 460 RYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK-EKSTGNSTKMLRV 518
+Y+R+ EE+R++D YPK I +W+GIPESP+G+F+ + FTYF K K + + L+V
Sbjct: 1534KYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKV 1713
Query: 519 EPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDIIIKLDNT-ASTVKAIAIVIPCILALC 577
EPGYP+S L+D+MGC P+ D + ++ III++D V A A+V+P +L L
Sbjct: 1714EPGYPKSALRDWMGC--PSGGRPDEGTEEETEVIIIEVDEEGGGAVSAAAVVLPVLLLLL 1887
Query: 578 LLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
+L + VF F+R GTPR +LYC+RS+ + V
Sbjct: 1888VLAVGLAVFFFRRHGTPRRLLYCQRSLLDKV 1980
>gb|U41078.1|HSU41078 Human membrane-type matrix metalloproteinase-1 mRNA, complete cds
Length = 1749
Score = 627 bits (1617), Expect = e-177
Identities = 302/571 (52%), Positives = 397/571 (68%), Gaps = 3/571 (0%)
Frame = +1
Query: 41 FNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPR 100
F+ E WLQ+YGYLPP D R RS +++ +AIAAMQ+FYG+ +TGK D +T+ M++PR
Sbjct: 97 FSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPR 276
Query: 101 CGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
CGVPD+ K N+RRKRYA+ G KWQH I + I+N TPKVG+ T +AIR+AF VW+
Sbjct: 277 CGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATYEAIRKAFRVWE 456
Query: 161 NVTPLTFEEVPYIELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+ TPL F EVPY + G ++ DI I FA GFHGDS+PFDGEGGFLAHAYFPGP IGGD
Sbjct: 457 SATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGD 636
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
THFDS EPWT+ N + +GND+FLVAVHELGHALGLEHS+DP+AIMAPFYQ+M+T+NF LP
Sbjct: 637 THFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTENFVLP 816
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
+DD +GIQ++YG S+P P
Sbjct: 817 DDDRRGIQQLYGGESGFPTKMPPQPRTTSRPSVP-------------------DKPKNPT 939
Query: 340 AKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
PNICDGNF+T+ +LR EMFVFK++WFWRVRNN+VMDGYPM I FWRGLP SI+ YE
Sbjct: 940 YGPNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYE 1119
Query: 400 NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGD 459
+G FVFFK +K WVF + +L+PGYP + LG G+P+ ID+A++W GKTYFF+G+
Sbjct: 1120RKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGN 1299
Query: 460 RYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK-EKSTGNSTKMLRV 518
+Y+R+ EE+R++D YPK I +W+GIPESP+G+F+ + FTYF K K + + L+V
Sbjct: 1300KYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKV 1479
Query: 519 EPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDIIIKLDNT-ASTVKAIAIVIPCILALC 577
EPGYP+S L+D+MGC P+ D + ++ III++D V A A+V+P +L L
Sbjct: 1480EPGYPKSALRDWMGC--PSGGRPDEGTEEETEVIIIEVDEEGGGAVSAAAVVLPVLLLLL 1653
Query: 578 LLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
+L + VF F+R GTPR +LYC+RS+ + V
Sbjct: 1654VLAVGLAVFFFRRHGTPRRLLYCQRSLLDKV 1746
>emb|Z48481.1|HSMMPM1 H.sapiens mRNA for membrane-type matrix metalloproteinase 1
Length = 3437
Score = 627 bits (1617), Expect = e-177
Identities = 302/571 (52%), Positives = 397/571 (68%), Gaps = 3/571 (0%)
Frame = +3
Query: 41 FNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPR 100
F+ E WLQ+YGYLPP D R RS +++ +AIAAMQ+FYG+ +TGK D +T+ M++PR
Sbjct: 210 FSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPR 389
Query: 101 CGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
CGVPD+ K N+RRKRYA+ G KWQH I + I+N TPKVG+ T +AIR+AF VW+
Sbjct: 390 CGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATYEAIRKAFRVWE 569
Query: 161 NVTPLTFEEVPYIELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+ TPL F EVPY + G ++ DI I FA GFHGDS+PFDGEGGFLAHAYFPGP IGGD
Sbjct: 570 SATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGD 749
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
THFDS EPWT+ N + +GND+FLVAVHELGHALGLEHS+DP+AIMAPFYQ+M+T+NF LP
Sbjct: 750 THFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTENFVLP 929
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
+DD +GIQ++YG S+P P
Sbjct: 930 DDDRRGIQQLYGGESGFPTKMPPQPRTTSRPSVP-------------------DKPKNPT 1052
Query: 340 AKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
PNICDGNF+T+ +LR EMFVFK++WFWRVRNN+VMDGYPM I FWRGLP SI+ YE
Sbjct: 1053YGPNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYE 1232
Query: 400 NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGD 459
+G FVFFK +K WVF + +L+PGYP + LG G+P+ ID+A++W GKTYFF+G+
Sbjct: 1233RKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGN 1412
Query: 460 RYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK-EKSTGNSTKMLRV 518
+Y+R+ EE+R++D YPK I +W+GIPESP+G+F+ + FTYF K K + + L+V
Sbjct: 1413KYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKV 1592
Query: 519 EPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDIIIKLDNT-ASTVKAIAIVIPCILALC 577
EPGYP+S L+D+MGC P+ D + ++ III++D V A A+V+P +L L
Sbjct: 1593EPGYPKSALRDWMGC--PSGGRPDEGTEEETEVIIIEVDEEGGGAVSAAAVVLPVLLLLL 1766
Query: 578 LLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
+L + VF F+R GTPR +LYC+RS+ + V
Sbjct: 1767VLAVGLAVFFFRRHGTPRRLLYCQRSLLDKV 1859
>emb|X83535.1|HSMTMMP29 Homo sapiens mRNA for membrane-type matrix metalloproteinase
Length = 2365
Score = 627 bits (1617), Expect = e-177
Identities = 302/571 (52%), Positives = 397/571 (68%), Gaps = 3/571 (0%)
Frame = +3
Query: 41 FNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPR 100
F+ E WLQ+YGYLPP D R RS +++ +AIAAMQ+FYG+ +TGK D +T+ M++PR
Sbjct: 216 FSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPR 395
Query: 101 CGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
CGVPD+ K N+RRKRYA+ G KWQH I + I+N TPKVG+ T +AIR+AF VW+
Sbjct: 396 CGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATYEAIRKAFRVWE 575
Query: 161 NVTPLTFEEVPYIELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+ TPL F EVPY + G ++ DI I FA GFHGDS+PFDGEGGFLAHAYFPGP IGGD
Sbjct: 576 SATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGD 755
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
THFDS EPWT+ N + +GND+FLVAVHELGHALGLEHS+DP+AIMAPFYQ+M+T+NF LP
Sbjct: 756 THFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTENFVLP 935
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
+DD +GIQ++YG S+P P
Sbjct: 936 DDDRRGIQQLYGGESGFPTKMPPQPRTTSRPSVP-------------------DKPKNPT 1058
Query: 340 AKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
PNICDGNF+T+ +LR EMFVFK++WFWRVRNN+VMDGYPM I FWRGLP SI+ YE
Sbjct: 1059YGPNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYE 1238
Query: 400 NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGD 459
+G FVFFK +K WVF + +L+PGYP + LG G+P+ ID+A++W GKTYFF+G+
Sbjct: 1239RKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGN 1418
Query: 460 RYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK-EKSTGNSTKMLRV 518
+Y+R+ EE+R++D YPK I +W+GIPESP+G+F+ + FTYF K K + + L+V
Sbjct: 1419KYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKV 1598
Query: 519 EPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDIIIKLDNT-ASTVKAIAIVIPCILALC 577
EPGYP+S L+D+MGC P+ D + ++ III++D V A A+V+P +L L
Sbjct: 1599EPGYPKSALRDWMGC--PSGGRPDEGTEEETEVIIIEVDEEGGGAVSAAAVVLPVLLLLL 1772
Query: 578 LLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
+L + VF F+R GTPR +LYC+RS+ + V
Sbjct: 1773VLAVGLAVFFFRRHGTPRRLLYCQRSLLDKV 1865
>dbj|AB010921.1|AB010921 Capra hircus MT1MMP mRNA for Membrane-type matrix
metalloproteinase-1, complete cds
Length = 1798
Score = 627 bits (1616), Expect = e-177
Identities = 302/580 (52%), Positives = 400/580 (68%), Gaps = 3/580 (0%)
Frame = +2
Query: 32 ATVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRN 91
A++ A+ F+ E WLQ+YGYLPP D R RS +++ +AIAAMQ+FYG+ +TGK D +
Sbjct: 95 ASLSSAQSSFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADAD 274
Query: 92 TIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKA 151
T+ M++PRCGVPD+ K N+RRKRYA+ G KWQH I + I+N TPKVG+ T +A
Sbjct: 275 TMKAMRRPRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATFEA 454
Query: 152 IRRAFDVWQNVTPLTFEEVPYIELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAY 210
IR+AF VW++ TPL F EVPY + G ++ D+ I FA GFHGDS+PFDGEGGFLAHAY
Sbjct: 455 IRKAFRVWESATPLRFREVPYAYIREGHEKQADVMIFFAEGFHGDSTPFDGEGGFLAHAY 634
Query: 211 FPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQY 270
FPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGLEHSNDP+AIMAPFYQ+
Sbjct: 635 FPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQW 814
Query: 271 METDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXX 330
M+T+NF LP+DD +GIQ++YG SIP
Sbjct: 815 MDTENFVLPDDDRRGIQQLYGSKSGSPTKIPPQPRTTSRPSIPDKPKN------------ 958
Query: 331 XXXXXSYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGL 390
P PNICDGNF+T+ +LR EMFVFK++WFWRVR N+VMDGYPM I FWRGL
Sbjct: 959 -------PTYGPNICDGNFDTVAMLRGEMFVFKERWFWRVRKNQVMDGYPMPIGQFWRGL 1117
Query: 391 PPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDV 450
P SI+ YE +G FVFFK +K WVF + +L+PGYP + LG G+P+ ID+A++W
Sbjct: 1118PASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDRIDAALFWMPS 1297
Query: 451 GKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK-EKST 509
GKTYFF+G++Y+R+ EE+R ++ YPK I +W+GIPESP+G+F+ + FTYF K K
Sbjct: 1298GKTYFFRGNKYYRFNEELRIVESEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYW 1477
Query: 510 GNSTKMLRVEPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDIIIKLDNTAS-TVKAIAI 568
+ + L+VEPGYP+S L+D+MGC + D + ++ III++D S V A A+
Sbjct: 1478KFNNQKLKVEPGYPKSALRDWMGCPS-SGGQPDEGTEEETEVIIIEVDEEGSGAVSAAAV 1654
Query: 569 VIPCILALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
V+P +L L +L + VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1655VLPVLLLLLVLAVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1774
>emb|X83537.1|RNMTMMP Rattus norvegicus mRNA for membrane-type matrix metalloproteinase
Length = 2412
Score = 626 bits (1615), Expect = e-177
Identities = 307/596 (51%), Positives = 406/596 (67%), Gaps = 3/596 (0%)
Frame = +2
Query: 16 SQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAA 75
S+S +L L T L + F+ E WLQ+YGYLPP D R RS +++ +AIAA
Sbjct: 194 SRSLLLPLLTLGTTLASLGWAQSSNFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAA 373
Query: 76 MQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYS 135
+Q+FYG+ +TGK D +T+ M++PRCGVPD+ K N+RRKRYA+ G KWQH I +
Sbjct: 374 IQRFYGLQVTGKADSDTMKAMRRPRCGVPDKFGTEIKANVRRKRYAIQGLKWQHNEITFC 553
Query: 136 IKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENG-KRDVDITIIFASGFHG 194
I+N TPKVG+ T +AIR+AF VW++ TPL F EVPY + G ++ DI I+FA GFHG
Sbjct: 554 IQNYTPKVGEYATFEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHG 733
Query: 195 DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGL 254
DS+PFDGEGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGL
Sbjct: 734 DSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGL 913
Query: 255 EHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPP 314
EHSNDP+ IMAPFYQ+M+T+NF LP+DD +GIQ++YG S+P
Sbjct: 914 EHSNDPSDIMAPFYQWMDTENFVLPDDDRRGIQQLYGSKSGSPTKMPPQPRTTSRPSVPD 1093
Query: 315 AXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNR 374
P PNICDGNF+T+ +LR EMFVFK++WFWRVRNN+
Sbjct: 1094KPRN-------------------PTYGPNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQ 1216
Query: 375 VMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGS 434
VMDGYPM I FWRGLP SI+ YE +G FVFFK +K WVF + +L+PGYP + LG
Sbjct: 1217VMDGYPMPIGQFWRGLPASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGR 1396
Query: 435 GIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFV 494
G+P+ ID+A++W GKTYFF+G++Y+R+ EE R++D YPK I +W+GIPESP+G+F+
Sbjct: 1397GLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEEFRAVDSEYPKNIKVWEGIPESPRGSFM 1576
Query: 495 HKENGFTYFIK-EKSTGNSTKMLRVEPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDII 553
+ FTYF K K + + L+VEPGYP+S L+D+MGC P+ D + ++ II
Sbjct: 1577GSDEVFTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGC--PSGGRPDEGTEEETEVII 1750
Query: 554 IKLDNTAS-TVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
I++D S V A A+V+P +L L +L + VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1751IEVDEEGSGAVSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1918
>dbj|D26512.1|HUMMTMMP Human mRNA for membrane type matrix metalloproteinase, comlete cds
Length = 3403
Score = 626 bits (1614), Expect = e-177
Identities = 302/571 (52%), Positives = 396/571 (68%), Gaps = 3/571 (0%)
Frame = +1
Query: 41 FNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPR 100
F+ E WLQ+YGYLPP D R RS +++ +AIAAMQ+FYG+ +TGK D +T+ M++PR
Sbjct: 208 FSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPR 387
Query: 101 CGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
CGVPD+ K N+RRKRYA+ G KWQH I + I+N TPKVG+ T +AIR+AF VW+
Sbjct: 388 CGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATYEAIRKAFRVWE 567
Query: 161 NVTPLTFEEVPYIELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+ TPL F EVPY + G ++ DI I FA GFHGDS+PFDGEGGFLAHAYFPGP IGGD
Sbjct: 568 SATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGD 747
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
THFDS EPWT+ N + +GND+FLVAVHELGHALGLEHS+DP+AIMAPFYQ+M+T+NF LP
Sbjct: 748 THFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTENFVLP 927
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
+DD +GIQ++YG S+P P
Sbjct: 928 DDDRRGIQQLYGGESGFPTKMPPQPRTTSRPSVP-------------------DKPKNPT 1050
Query: 340 AKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
PNICDGNF+T+ +LR EMFVFK +WFWRVRNN+VMDGYPM I FWRGLP SI+ YE
Sbjct: 1051YGPNICDGNFDTVAMLRGEMFVFKKRWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYE 1230
Query: 400 NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGD 459
+G FVFFK +K WVF + +L+PGYP + LG G+P+ ID+A++W GKTYFF+G+
Sbjct: 1231RKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGN 1410
Query: 460 RYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK-EKSTGNSTKMLRV 518
+Y+R+ EE+R++D YPK I +W+GIPESP+G+F+ + FTYF K K + + L+V
Sbjct: 1411KYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKV 1590
Query: 519 EPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDIIIKLDNT-ASTVKAIAIVIPCILALC 577
EPGYP+S L+D+MGC P+ D + ++ III++D V A A+V+P +L L
Sbjct: 1591EPGYPKSALRDWMGC--PSGGRPDEGTEEETEVIIIEVDEEGGGAVSAAAVVLPVLLLLL 1764
Query: 578 LLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
+L + VF F+R GTPR +LYC+RS+ + V
Sbjct: 1765VLAVGLAVFFFRRHGTPRRLLYCQRSLLDKV 1857
>emb|X90925.1|HSMTMMPPR H.sapiens mRNA for MT-MMP protein
Length = 2369
Score = 625 bits (1612), Expect = e-177
Identities = 301/571 (52%), Positives = 396/571 (68%), Gaps = 3/571 (0%)
Frame = +2
Query: 41 FNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPR 100
F+ E WLQ+YGYLPP D R RS +++ +AIAAMQ+FYG+ +TGK D +T+ M++PR
Sbjct: 209 FSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPR 388
Query: 101 CGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
CGVPD+ K N+RRKRYA+ G KWQH I + I+N TPKVG+ T +AIR+AF VW+
Sbjct: 389 CGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATYEAIRKAFRVWE 568
Query: 161 NVTPLTFEEVPYIELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+ TPL F EVPY + G ++ DI I FA GFHGDS+PFDGEGGFLAHAYFPGP IGGD
Sbjct: 569 SATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGD 748
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
THFDS EPWT+ N + +GND+FLVAVHELGHALGLEHS+DP+AIMAPFYQ+M+T+NF LP
Sbjct: 749 THFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSSDPSAIMAPFYQWMDTENFVLP 928
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
+DD +GIQ++YG S+P P
Sbjct: 929 DDDRRGIQQLYGGESGFPTKMPPQPRTTSRPSVP-------------------DKPKNPT 1051
Query: 340 AKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
PNICDGNF+T+ +LR EMFVFK++WFWRVRNN+VMDGYPM I FWRGLP SI+ YE
Sbjct: 1052YGPNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYE 1231
Query: 400 NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGD 459
+G FVFFK +K WVF + +L+PGYP + LG G+P+ ID+A++W GKTYFF+G+
Sbjct: 1232RKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGN 1411
Query: 460 RYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK-EKSTGNSTKMLRV 518
+Y+R+ EE+R++D YPK I +W+GIPESP+G+F+ + FTYF K K + + L+V
Sbjct: 1412KYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKV 1591
Query: 519 EPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDIIIKLDNT-ASTVKAIAIVIPCILALC 577
EPGYP+ L+D+MGC P+ D + ++ III++D V A A+V+P +L L
Sbjct: 1592EPGYPKPALRDWMGC--PSGGRPDEGTEEETEVIIIEVDEEGGGAVSAAAVVLPVLLLLL 1765
Query: 578 LLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
+L + VF F+R GTPR +LYC+RS+ + V
Sbjct: 1766VLAVGLAVFFFRRHGTPRRLLYCQRSLLDKV 1858
>gb|AF067419.1|AF067419 Sus scrofa membrane-type 1 matrix metalloproteinase (MT1-MMP) mRNA,
complete cds
Length = 3284
Score = 622 bits (1605), Expect = e-176
Identities = 301/573 (52%), Positives = 396/573 (68%), Gaps = 3/573 (0%)
Frame = +1
Query: 39 QYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKK 98
Q F+ E WLQ+YGYLPP D R RS +++ +AIAAMQ+FYG+ +TGK D +T+ M++
Sbjct: 85 QSFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADADTMKAMRR 264
Query: 99 PRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDV 158
PRCGVPD+ K N+RRKRYA+ G KWQH I + I+N TPKVG+ T +AIR+AF V
Sbjct: 265 PRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATFEAIRKAFRV 444
Query: 159 WQNVTPLTFEEVPYIELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 217
W++ TPL F EVPY + G ++ DI I FA GFHGDS+PFDGEGGFLAHAYFPGP IG
Sbjct: 445 WESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIG 624
Query: 218 GDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFK 277
GDTHFDS EPWT+ N + +GND+FLVAVHELGHALGLEHSNDP+AIMAPFYQ+M+T+NF
Sbjct: 625 GDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTENFV 804
Query: 278 LPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSY 337
LP+DD +GIQ++YG S+P
Sbjct: 805 LPDDDRRGIQQLYGSESGFPTKMPPQPRTTSKPSVP-------------------DKPKN 927
Query: 338 PGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 397
P PNICDGNF+T+ +LR EMFVFK++WFWRVR N+VMDGYPM I FWRGLP SI+
Sbjct: 928 PTYGPNICDGNFDTVAMLRGEMFVFKERWFWRVRKNQVMDGYPMPIGQFWRGLPASINTA 1107
Query: 398 YENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFK 457
YE +G FVFFK +K WVF + +L+PGYP + LG +P+ ID+A++W GK YFF+
Sbjct: 1108YERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRRLPTDKIDAALFWMPNGKDYFFR 1287
Query: 458 GDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK-EKSTGNSTKML 516
G++Y+R+ EE+R++D YPK I +W+GIPESP+G+F+ + FTYF K K + + L
Sbjct: 1288GNKYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKL 1467
Query: 517 RVEPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDIIIKLDNTAS-TVKAIAIVIPCILA 575
+VEPGYP+S L+D+MGC P+ D + ++ III++D S V A A+V+P +L
Sbjct: 1468KVEPGYPKSALRDWMGC--PSGGRPDEGTEEETEVIIIEVDEEGSGAVSAAAVVLPVLLL 1641
Query: 576 LCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
L +L + VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1642LLVLAVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1740
>gb|AF290429.1|AF290429 Bos taurus membrane-type matrix metalloprotease 1 mRNA, complete
cds
Length = 1805
Score = 622 bits (1605), Expect = e-176
Identities = 300/580 (51%), Positives = 399/580 (68%), Gaps = 3/580 (0%)
Frame = +3
Query: 32 ATVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRN 91
A++ A+ F+ E WLQ++GYLPP D R RS +++ +AIAAMQ+FYG+ +TGK D +
Sbjct: 123 ASLSSAQSSFSPEAWLQQHGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADAD 302
Query: 92 TIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKA 151
T+ M++PRCGVPD+ K N+RRKRYA+ G KWQH I + I+N TP VG+ T +A
Sbjct: 303 TMKAMRRPRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPNVGEYATFEA 482
Query: 152 IRRAFDVWQNVTPLTFEEVPYIELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAY 210
IR+AF VW++ TPL F EVPY + G ++ DI I FA GFHGDS+PFDGEGGFLAHAY
Sbjct: 483 IRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAY 662
Query: 211 FPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQY 270
FPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGLEHSNDP+AIMAPFYQ+
Sbjct: 663 FPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQW 842
Query: 271 METDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXX 330
M+T+NF LP+DD +GIQ++YG S+P
Sbjct: 843 MDTENFVLPDDDRRGIQQLYGSKSGSPTKMPPQPRTTSRPSVPDKPKN------------ 986
Query: 331 XXXXXSYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGL 390
P PNICDGNF+T+ +LR EMFVFK++WFWRVR N+VMDGYPM I FWRGL
Sbjct: 987 -------PTYGPNICDGNFDTVAMLRGEMFVFKERWFWRVRKNQVMDGYPMPIGQFWRGL 1145
Query: 391 PPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDV 450
P SI+ YE +G FVFFK +K WVF + +L+PGYP + LG G+P+ ID+A++W
Sbjct: 1146PASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDRIDAALFWMPN 1325
Query: 451 GKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK-EKST 509
GKTYFF+G++Y+R+ EE+R ++ YPK I +W+GIPESP+G+F+ + FTYF K K
Sbjct: 1326GKTYFFRGNKYYRFNEELRIVESEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYW 1505
Query: 510 GNSTKMLRVEPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDIIIKLDNTAS-TVKAIAI 568
+ + L+VEPGYP+S L+D+MGC + D + ++ III++D S V A A+
Sbjct: 1506KFNNQKLKVEPGYPKSALRDWMGCPS-SGGQPDEGTEEETEVIIIEVDEEGSGAVSAAAV 1682
Query: 569 VIPCILALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
V+P +L L +L + VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1683VLPVLLLLLVLAVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1802
>gb|AF306662.2|AF306662 Cricetulus griseus matrix metalloprotease MT1-MMP (MMP14) mRNA,
complete cds
Length = 1927
Score = 621 bits (1602), Expect = e-176
Identities = 299/571 (52%), Positives = 397/571 (69%), Gaps = 3/571 (0%)
Frame = +2
Query: 41 FNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPR 100
F+ E WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+ +TGK D +T+ MK+PR
Sbjct: 275 FSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAVAAMQRFYGLQVTGKADLDTMKAMKRPR 454
Query: 101 CGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
CGVPD+ K N+RRKRYA+ G KWQH I + I+N TPKVG+ T +AIR+AF VW+
Sbjct: 455 CGVPDKFGTEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATFEAIRKAFRVWE 634
Query: 161 NVTPLTFEEVPYIELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+ TPL F EVPY + G ++ DI I+FA GFHGDS+PFDGEGGFLAHAYFPGP IGGD
Sbjct: 635 SATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGD 814
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
THFDS EPWT+ N + +GND+FLVAVHELGHALGLEHSNDP+AIMAPFYQ+M+T+NF LP
Sbjct: 815 THFDSAEPWTVQNEDLNGNDVFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTENFVLP 994
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
+DD +GIQ++YG S+P P
Sbjct: 995 DDDRRGIQQLYGSKSGSPTKMPPQPRTTSWPSVPDKPRN-------------------PT 1117
Query: 340 AKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
PNICDGNF+T+ +LR EMFVFK++WFWRVRNN+VM GYPM I FWRGLP S++ YE
Sbjct: 1118YGPNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQVMVGYPMPIGQFWRGLPASMNTAYE 1297
Query: 400 NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGD 459
+G FVFFK +K WVF + +L+PGYP + LG G+P+ ID+A++W GKTYFF+G+
Sbjct: 1298RKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGN 1477
Query: 460 RYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK-EKSTGNSTKMLRV 518
+Y+R+ EE R++D YPK I +W+GIPESP+G+F+ + FTYF K K + + L+V
Sbjct: 1478KYYRFNEEFRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKV 1657
Query: 519 EPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDIIIKLDNT-ASTVKAIAIVIPCILALC 577
EPGYP+S L+D+MGC P+ D + ++ III++D V A A+++P +L +
Sbjct: 1658EPGYPKSALRDWMGC--PSGGRPDEGTEEETEVIIIEVDEEGGGAVNAAAVLLPVLLLVL 1831
Query: 578 LLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
+LV+ VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1832VLVVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1924
>gb|BC006412.1|BC006412 Homo sapiens, matrix metalloproteinase 15 (membrane-inserted),
clone MGC:10773 IMAGE:3607064, mRNA, complete cds
Length = 3458
Score = 617 bits (1590), Expect = e-174
Identities = 304/618 (49%), Positives = 397/618 (64%), Gaps = 51/618 (8%)
Frame = +2
Query: 42 NVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
+ E WL+ YGYLP MS +RSA+ + SA+A MQ+FYGI +TG +D T +WMK+PRC
Sbjct: 59 HAENWLRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKEWMKRPRC 238
Query: 102 GVPDQTRGSSKFNIRR--KRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVW 159
GVPDQ K N+RR KRYALTG+KW + H+ +SI+N T K+G + +A+RRAF VW
Sbjct: 239 GVPDQFGVRVKANLRRRRKRYALTGRKWNNHHLTFSIQNYTEKLGWYHSMEAVRRAFRVW 418
Query: 160 QNVTPLTFEEVPYIELE-NGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGG 218
+ TPL F+EVPY ++ +++ DI ++FASGFHGDSSPFDG GGFLAHAYFPGPG+GG
Sbjct: 419 EQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGG 598
Query: 219 DTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKL 278
DTHFD+DEPWT + + GN+LFLVAVHELGHALGLEHS++P AIMAPFYQ+ + DNFKL
Sbjct: 599 DTHFDADEPWTFSSTDLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDNFKL 778
Query: 279 PNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHR------------SIPPAXXXXXXXXXXX 326
P DDL+GIQ++YG R PP
Sbjct: 779 PEDDLRGIQQLYGTPDGQPQPTQPLPTVTPRRPGRPDHRPPRPPQPPPPGGKPERPPKPG 958
Query: 327 XXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYF 386
PNICDG+F+T+ +LR EMFVFK +WFWRVR+NRV+D YPM I +F
Sbjct: 959 PPVQPRATERPDQYGPNICDGDFDTVAMLRGEMFVFKGRWFWRVRHNRVLDNYPMPIGHF 1138
Query: 387 WRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIW 446
WRGLP I A YE +G FVFFK +++W+F++ L+PGYP L + G GIP ID+AIW
Sbjct: 1139WRGLPGDISAAYERQDGRFVFFKGDRYWLFREANLEPGYPQPLTSYGLGIPYDRIDTAIW 1318
Query: 447 WEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK- 505
WE G T+FF+ DRYWR+ EE + DPGYPKPI++W+GIP SP+GAF+ + +TYF K
Sbjct: 1319WEPTGHTFFFQEDRYWRFNEETQRGDPGYPKPISVWQGIPASPKGAFLSNDAAYTYFYKG 1498
Query: 506 EKSTGNSTKMLRVEPGYPRSILKDFMGCD-----GPTDRDKDR-------------HSPQ 547
K + LR+EPGYP+SIL+DFMGC GP D R S +
Sbjct: 1499TKYWKFDNERLRMEPGYPKSILRDFMGCQEHVEPGPRWPDVARPPFNPHGGAEPGADSAE 1678
Query: 548 DDVD-----------------IIIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKR 590
DV ++++++ A TV + +++P +L LC+L L Y + Q +R
Sbjct: 1679GDVGDGDGDFGAGVNKDRGSRVVVQMEEVARTVNVVMVLVPLLLLLCVLGLTYALVQMQR 1858
Query: 591 EGTPRHILYCKRSMQEWV 608
+G PR +LYCKRS+QEWV
Sbjct: 1859KGAPRVLLYCKRSLQEWV 1912
>ref|NM_002428.1| Homo sapiens matrix metalloproteinase 15 (membrane-inserted)
(MMP15), mRNA
Length = 3530
Score = 617 bits (1590), Expect = e-174
Identities = 304/618 (49%), Positives = 397/618 (64%), Gaps = 51/618 (8%)
Frame = +1
Query: 42 NVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
+ E WL+ YGYLP MS +RSA+ + SA+A MQ+FYGI +TG +D T +WMK+PRC
Sbjct: 202 HAENWLRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKEWMKRPRC 381
Query: 102 GVPDQTRGSSKFNIRR--KRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVW 159
GVPDQ K N+RR KRYALTG+KW + H+ +SI+N T K+G + +A+RRAF VW
Sbjct: 382 GVPDQFGVRVKANLRRRRKRYALTGRKWNNHHLTFSIQNYTEKLGWYHSMEAVRRAFRVW 561
Query: 160 QNVTPLTFEEVPYIELE-NGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGG 218
+ TPL F+EVPY ++ +++ DI ++FASGFHGDSSPFDG GGFLAHAYFPGPG+GG
Sbjct: 562 EQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGG 741
Query: 219 DTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKL 278
DTHFD+DEPWT + + GN+LFLVAVHELGHALGLEHS++P AIMAPFYQ+ + DNFKL
Sbjct: 742 DTHFDADEPWTFSSTDLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDNFKL 921
Query: 279 PNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHR------------SIPPAXXXXXXXXXXX 326
P DDL+GIQ++YG R PP
Sbjct: 922 PEDDLRGIQQLYGTPDGQPQPTQPLPTVTPRRPGRPDHRPPRPPQPPPPGGKPERPPKPG 1101
Query: 327 XXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYF 386
PNICDG+F+T+ +LR EMFVFK +WFWRVR+NRV+D YPM I +F
Sbjct: 1102PPVQPRATERPDQYGPNICDGDFDTVAMLRGEMFVFKGRWFWRVRHNRVLDNYPMPIGHF 1281
Query: 387 WRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIW 446
WRGLP I A YE +G FVFFK +++W+F++ L+PGYP L + G GIP ID+AIW
Sbjct: 1282WRGLPGDISAAYERQDGRFVFFKGDRYWLFREANLEPGYPQPLTSYGLGIPYDRIDTAIW 1461
Query: 447 WEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK- 505
WE G T+FF+ DRYWR+ EE + DPGYPKPI++W+GIP SP+GAF+ + +TYF K
Sbjct: 1462WEPTGHTFFFQEDRYWRFNEETQRGDPGYPKPISVWQGIPASPKGAFLSNDAAYTYFYKG 1641
Query: 506 EKSTGNSTKMLRVEPGYPRSILKDFMGCD-----GPTDRDKDR-------------HSPQ 547
K + LR+EPGYP+SIL+DFMGC GP D R S +
Sbjct: 1642TKYWKFDNERLRMEPGYPKSILRDFMGCQEHVEPGPRWPDVARPPFNPHGGAEPGADSAE 1821
Query: 548 DDVD-----------------IIIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKR 590
DV ++++++ A TV + +++P +L LC+L L Y + Q +R
Sbjct: 1822GDVGDGDGDFGAGVNKDGGSRVVVQMEEVARTVNVVMVLVPLLLLLCVLGLTYALVQMQR 2001
Query: 591 EGTPRHILYCKRSMQEWV 608
+G PR +LYCKRS+QEWV
Sbjct: 2002KGAPRVLLYCKRSLQEWV 2055
>emb|Z48482.1|HSMMPM2 H.sapiens mRNA for membrane-type matrix metalloproteinase 2
Length = 3530
Score = 617 bits (1590), Expect = e-174
Identities = 304/618 (49%), Positives = 397/618 (64%), Gaps = 51/618 (8%)
Frame = +1
Query: 42 NVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
+ E WL+ YGYLP MS +RSA+ + SA+A MQ+FYGI +TG +D T +WMK+PRC
Sbjct: 202 HAENWLRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKEWMKRPRC 381
Query: 102 GVPDQTRGSSKFNIRR--KRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVW 159
GVPDQ K N+RR KRYALTG+KW + H+ +SI+N T K+G + +A+RRAF VW
Sbjct: 382 GVPDQFGVRVKANLRRRRKRYALTGRKWNNHHLTFSIQNYTEKLGWYHSMEAVRRAFRVW 561
Query: 160 QNVTPLTFEEVPYIELE-NGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGG 218
+ TPL F+EVPY ++ +++ DI ++FASGFHGDSSPFDG GGFLAHAYFPGPG+GG
Sbjct: 562 EQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGG 741
Query: 219 DTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKL 278
DTHFD+DEPWT + + GN+LFLVAVHELGHALGLEHS++P AIMAPFYQ+ + DNFKL
Sbjct: 742 DTHFDADEPWTFSSTDLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDNFKL 921
Query: 279 PNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHR------------SIPPAXXXXXXXXXXX 326
P DDL+GIQ++YG R PP
Sbjct: 922 PEDDLRGIQQLYGTPDGQPQPTQPLPTVTPRRPGRPDHRPPRPPQPPPPGGKPERPPKPG 1101
Query: 327 XXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYF 386
PNICDG+F+T+ +LR EMFVFK +WFWRVR+NRV+D YPM I +F
Sbjct: 1102PPVQPRATERPDQYGPNICDGDFDTVAMLRGEMFVFKGRWFWRVRHNRVLDNYPMPIGHF 1281
Query: 387 WRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIW 446
WRGLP I A YE +G FVFFK +++W+F++ L+PGYP L + G GIP ID+AIW
Sbjct: 1282WRGLPGDISAAYERQDGRFVFFKGDRYWLFREANLEPGYPQPLTSYGLGIPYDRIDTAIW 1461
Query: 447 WEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK- 505
WE G T+FF+ DRYWR+ EE + DPGYPKPI++W+GIP SP+GAF+ + +TYF K
Sbjct: 1462WEPTGHTFFFQEDRYWRFNEETQRGDPGYPKPISVWQGIPASPKGAFLSNDAAYTYFYKG 1641
Query: 506 EKSTGNSTKMLRVEPGYPRSILKDFMGCD-----GPTDRDKDR-------------HSPQ 547
K + LR+EPGYP+SIL+DFMGC GP D R S +
Sbjct: 1642TKYWKFDNERLRMEPGYPKSILRDFMGCQEHVEPGPRWPDVARPPFNPHGGAEPGADSAE 1821
Query: 548 DDVD-----------------IIIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKR 590
DV ++++++ A TV + +++P +L LC+L L Y + Q +R
Sbjct: 1822GDVGDGDGDFGAGVNKDGGSRVVVQMEEVARTVNVVMVLVPLLLLLCVLGLTYALVQMQR 2001
Query: 591 EGTPRHILYCKRSMQEWV 608
+G PR +LYCKRS+QEWV
Sbjct: 2002KGAPRVLLYCKRSLQEWV 2055
>ref|NM_008609.1| Mus musculus matrix metalloproteinase 15 (Mmp15), mRNA
Length = 3339
Score = 615 bits (1585), Expect = e-174
Identities = 301/630 (47%), Positives = 403/630 (63%), Gaps = 54/630 (8%)
Frame = +2
Query: 33 TVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNT 92
T K + + E WL+ YGYLP MS +RSA+ + SA+A MQ FYGI +TG +D T
Sbjct: 143 TASKDAEVYAAENWLRLYGYLPQPSRHMSTMRSAQILASALAEMQSFYGIPVTGVLDEET 322
Query: 93 IDWMKKPRCGVPDQTRGSSKFNIRR--KRYALTGQKWQHKHIAYSIKNVTPKVGDAETRK 150
WMK+PRCGVPDQ K N+RR KRY LTG+ W + H+ +SI+N T K+G + +
Sbjct: 323 KTWMKRPRCGVPDQFGVHVKANLRRRRKRYTLTGKAWNNYHLTFSIQNYTEKLGWYNSME 502
Query: 151 AIRRAFDVWQNVTPLTFEEVPYIELENGKR-DVDITIIFASGFHGDSSPFDGEGGFLAHA 209
A+RRAF VW+ VTPL F+EV Y ++ +R + DI ++FASGFHGDSSPFDG GGFLAHA
Sbjct: 503 AVRRAFQVWEQVTPLVFQEVSYDDIRLRRRAEADIMVLFASGFHGDSSPFDGVGGFLAHA 682
Query: 210 YFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ 269
YFPGPG+GGDTHFD+DEPWT + + G LFLVAVHELGHALGLEHS++P+AIMAPFYQ
Sbjct: 683 YFPGPGLGGDTHFDADEPWTFSSTDLHGISLFLVAVHELGHALGLEHSSNPSAIMAPFYQ 862
Query: 270 YMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXX 329
+M+TDNF+LP DDL+GIQ++YG R P
Sbjct: 863 WMDTDNFQLPEDDLRGIQQLYGSPDGKPQPTRPLPTVRPRRPGRP-----------DHQP 1009
Query: 330 XXXXXXSYPGAKP-----------------------NICDGNFNTLVILRREMFVFKDQW 366
+PG KP NICDGNF+T+ +LR EMFVFK +W
Sbjct: 1010PRPPQPPHPGGKPERPPKPGPPPQPRATERPDQYGPNICDGNFDTVAVLRGEMFVFKGRW 1189
Query: 367 FWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYP 426
FWRVR+NRV+D YPM I +FWRGLP +I A YE +G+FVFFK N++W+F++ L+PGYP
Sbjct: 1190FWRVRHNRVLDNYPMPIGHFWRGLPGNISAAYERQDGHFVFFKGNRYWLFREANLEPGYP 1369
Query: 427 HDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIP 486
L + G+ IP ID+AIWWE G T+FF+ DRYWR+ EE + DPGYPKPI++W+GIP
Sbjct: 1370QPLSSYGTDIPYDRIDTAIWWEPTGHTFFFQADRYWRFNEETQHGDPGYPKPISVWQGIP 1549
Query: 487 ESPQGAFVHKENGFTYFIK-EKSTGNSTKMLRVEPGYPRSILKDFMGC------------ 533
SP+GAF+ + +TYF K K + + LR+EPG+P+SIL+DFMGC
Sbjct: 1550TSPKGAFLSNDAAYTYFYKGTKYWKFNNERLRMEPGHPKSILRDFMGCQEHVEPRSRWPD 1729
Query: 534 --------DGPTDRDKDRHSPQDDVD-------IIIKLDNTASTVKAIAIVIPCILALCL 578
+G + + D S +++ ++++++ TV + +++P +L LC+
Sbjct: 1730VARPPFNPNGGAEPEADGDSKEENAGDKDEGSRVVVQMEEVVRTVNVVMVLVPLLLLLCI 1909
Query: 579 LVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
L L + + Q +R+G PR +LYCKRS+QEWV
Sbjct: 1910LGLAFALVQMQRKGAPRMLLYCKRSLQEWV 1999
>dbj|D86332.1|D86332 Mus musculus mRNA for membrane type-2 matrix metalloproteinase,
complete cds
Length = 3339
Score = 615 bits (1585), Expect = e-174
Identities = 301/630 (47%), Positives = 403/630 (63%), Gaps = 54/630 (8%)
Frame = +2
Query: 33 TVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNT 92
T K + + E WL+ YGYLP MS +RSA+ + SA+A MQ FYGI +TG +D T
Sbjct: 143 TASKDAEVYAAENWLRLYGYLPQPSRHMSTMRSAQILASALAEMQSFYGIPVTGVLDEET 322
Query: 93 IDWMKKPRCGVPDQTRGSSKFNIRR--KRYALTGQKWQHKHIAYSIKNVTPKVGDAETRK 150
WMK+PRCGVPDQ K N+RR KRY LTG+ W + H+ +SI+N T K+G + +
Sbjct: 323 KTWMKRPRCGVPDQFGVHVKANLRRRRKRYTLTGKAWNNYHLTFSIQNYTEKLGWYNSME 502
Query: 151 AIRRAFDVWQNVTPLTFEEVPYIELENGKR-DVDITIIFASGFHGDSSPFDGEGGFLAHA 209
A+RRAF VW+ VTPL F+EV Y ++ +R + DI ++FASGFHGDSSPFDG GGFLAHA
Sbjct: 503 AVRRAFQVWEQVTPLVFQEVSYDDIRLRRRAEADIMVLFASGFHGDSSPFDGVGGFLAHA 682
Query: 210 YFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ 269
YFPGPG+GGDTHFD+DEPWT + + G LFLVAVHELGHALGLEHS++P+AIMAPFYQ
Sbjct: 683 YFPGPGLGGDTHFDADEPWTFSSTDLHGISLFLVAVHELGHALGLEHSSNPSAIMAPFYQ 862
Query: 270 YMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXX 329
+M+TDNF+LP DDL+GIQ++YG R P
Sbjct: 863 WMDTDNFQLPEDDLRGIQQLYGSPDGKPQPTRPLPTVRPRRPGRP-----------DHQP 1009
Query: 330 XXXXXXSYPGAKP-----------------------NICDGNFNTLVILRREMFVFKDQW 366
+PG KP NICDGNF+T+ +LR EMFVFK +W
Sbjct: 1010PRPPQPPHPGGKPERPPKPGPPPQPRATERPDQYGPNICDGNFDTVAVLRGEMFVFKGRW 1189
Query: 367 FWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYP 426
FWRVR+NRV+D YPM I +FWRGLP +I A YE +G+FVFFK N++W+F++ L+PGYP
Sbjct: 1190FWRVRHNRVLDNYPMPIGHFWRGLPGNISAAYERQDGHFVFFKGNRYWLFREANLEPGYP 1369
Query: 427 HDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIP 486
L + G+ IP ID+AIWWE G T+FF+ DRYWR+ EE + DPGYPKPI++W+GIP
Sbjct: 1370QPLSSYGTDIPYDRIDTAIWWEPTGHTFFFQADRYWRFNEETQHGDPGYPKPISVWQGIP 1549
Query: 487 ESPQGAFVHKENGFTYFIK-EKSTGNSTKMLRVEPGYPRSILKDFMGC------------ 533
SP+GAF+ + +TYF K K + + LR+EPG+P+SIL+DFMGC
Sbjct: 1550TSPKGAFLSNDAAYTYFYKGTKYWKFNNERLRMEPGHPKSILRDFMGCQEHVEPRSRWPD 1729
Query: 534 --------DGPTDRDKDRHSPQDDVD-------IIIKLDNTASTVKAIAIVIPCILALCL 578
+G + + D S +++ ++++++ TV + +++P +L LC+
Sbjct: 1730VARPPFNPNGGAEPEADGDSKEENAGDKDEGSRVVVQMEEVVRTVNVVMVLVPLLLLLCI 1909
Query: 579 LVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
L L + + Q +R+G PR +LYCKRS+QEWV
Sbjct: 1910LGLAFALVQMQRKGAPRMLLYCKRSLQEWV 1999
>gb|U73940.1|OCU73940 Oryctolagus cuniculus membane-type 1 metalloproteinase precursor
(MMP-14) mRNA, partial cds
Length = 1842
Score = 614 bits (1584), Expect = e-174
Identities = 297/561 (52%), Positives = 388/561 (68%), Gaps = 3/561 (0%)
Frame = +1
Query: 41 FNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPR 100
F+ E WLQ+YGYLPP D R RS +++ +AIAAMQ+FYG+ +TGK D +T+ M++PR
Sbjct: 223 FSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADTDTMKAMRRPR 402
Query: 101 CGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
CGVPD+ K N+RRKRYA+ G KWQH I + I+N TPKVG+ T +AIR+AF VW+
Sbjct: 403 CGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATFEAIRKAFRVWE 582
Query: 161 NVTPLTFEEVPYIELENGK-RDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+ TPL F EV Y + +G+ + DI I FA GFHGDS+PFDGEGGFLAHAYFPGP IGGD
Sbjct: 583 SATPLRFREVHYAYIRDGREKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGD 762
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
THFDS EPWT+ N + +GND+FLVAVHELGHALGLEHSNDP+AIMAPFYQ+M+T+NF LP
Sbjct: 763 THFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTENFVLP 942
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
+DD +GIQ++YG IP P
Sbjct: 943 DDDRRGIQQLYGSQSGSPTKMPPPPRTTSRTFIPDKPRN-------------------PT 1065
Query: 340 AKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
PNICDGNF+T+ +LR EMFVFK++WFWRVRNN+VMDGYPM I FWRGLP SI+ YE
Sbjct: 1066YGPNICDGNFDTVAVLRGEMFVFKERWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYE 1245
Query: 400 NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGD 459
+G FVFFK +K WVF + +L+PGYP + LG G+P+ ID+A++W GKTYFF+G+
Sbjct: 1246RKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGN 1425
Query: 460 RYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK-EKSTGNSTKMLRV 518
+Y+R+ EE+R++D YPK I +W+GIPESP+G+F+ + FTYF K K + + L+V
Sbjct: 1426KYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKV 1605
Query: 519 EPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDIIIKLDNTAS-TVKAIAIVIPCILALC 577
EPGYP+S L+D+MGC P D + ++ III++D S V A A+V+P +L L
Sbjct: 1606EPGYPKSALRDWMGC--PAGGRPDEGTEEETEVIIIEVDEEGSGAVSAAAVVLPVLLLLL 1779
Query: 578 LLVLVYTVFQFKREGTPRHIL 598
+L + VF F+R GTP+ +L
Sbjct: 1780VLAVGLAVFFFRRHGTPKRLL 1842
>ref|NM_008608.1| Mus musculus matrix metalloproteinase 14 (membrane-inserted)
(Mmp14), mRNA
Length = 2488
Score = 614 bits (1583), Expect = e-174
Identities = 304/596 (51%), Positives = 402/596 (67%), Gaps = 3/596 (0%)
Frame = +2
Query: 16 SQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAA 75
S+S +L L T L + F+ E WLQ+YGYLPP D R RS +++ +AIAA
Sbjct: 194 SRSLLLPLLTLGTALASLGWAQGSNFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAA 373
Query: 76 MQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYS 135
MQ+FYG+ +TGK D T+ M++PRCGVPD+ K N+RRKRYA+ G KWQH I +
Sbjct: 374 MQKFYGLQVTGKADLATMMAMRRPRCGVPDKFGTEIKANVRRKRYAIQGLKWQHNEITFC 553
Query: 136 IKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENG-KRDVDITIIFASGFHG 194
I+N TPKVG+ T +AIR+AF VW++ TPL F EVPY + G ++ DI I+FA GFHG
Sbjct: 554 IQNYTPKVGEYATFEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHG 733
Query: 195 DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGL 254
DS+PFDGEGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGL
Sbjct: 734 DSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGL 913
Query: 255 EHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPP 314
EHSNDP+ IM+PFYQ+M+T+NF LP+DD +GIQ++YG S+P
Sbjct: 914 EHSNDPSDIMSPFYQWMDTENFVLPDDDRRGIQQLYGSKSGSPTKMPPQPRTTSRPSVPD 1093
Query: 315 AXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNR 374
P PNICDGNF+T+ +LR EMFVFK++W WRVRNN+
Sbjct: 1094KPKN-------------------PAYGPNICDGNFDTVAMLRGEMFVFKERWLWRVRNNQ 1216
Query: 375 VMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGS 434
VMDGYPM I FWRGLP SI+ YE +G FVFFK +K WV + +L+PGY + + L
Sbjct: 1217VMDGYPMPIGQFWRGLPASINTAYERKDGTFVFFKGDKHWVCVEASLEPGYANHIKELVR 1396
Query: 435 GIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFV 494
G+PS ID+A++W GKTYFF+G++Y+R+ EE R++D YPK I +W+GIPESP+G+F+
Sbjct: 1397GLPSDKIDTALFWMPNGKTYFFRGNKYYRFNEEFRAVDSEYPKNIKVWEGIPESPRGSFM 1576
Query: 495 HKENGFTYFIK-EKSTGNSTKMLRVEPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDII 553
+ FTYF K K + + L+VEPGYP+S L+D+MGC P+ D + ++ II
Sbjct: 1577GSDEVFTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGC--PSGGRPDEGTEEETEVII 1750
Query: 554 IKLDNTAS-TVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
I++D S V A A+V+P +L L +L + VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1751IEVDEEGSGAVSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1918
>emb|X83536.2|MMMTMMP Mus musculus mRNA for membrane-type matrix metalloproteinase
Length = 2488
Score = 614 bits (1583), Expect = e-174
Identities = 304/596 (51%), Positives = 402/596 (67%), Gaps = 3/596 (0%)
Frame = +2
Query: 16 SQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAA 75
S+S +L L T L + F+ E WLQ+YGYLPP D R RS +++ +AIAA
Sbjct: 194 SRSLLLPLLTLGTALASLGWAQGSNFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAA 373
Query: 76 MQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYS 135
MQ+FYG+ +TGK D T+ M++PRCGVPD+ K N+RRKRYA+ G KWQH I +
Sbjct: 374 MQKFYGLQVTGKADLATMMAMRRPRCGVPDKFGTEIKANVRRKRYAIQGLKWQHNEITFC 553
Query: 136 IKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENG-KRDVDITIIFASGFHG 194
I+N TPKVG+ T +AIR+AF VW++ TPL F EVPY + G ++ DI I+FA GFHG
Sbjct: 554 IQNYTPKVGEYATFEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHG 733
Query: 195 DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGL 254
DS+PFDGEGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGL
Sbjct: 734 DSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGL 913
Query: 255 EHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPP 314
EHSNDP+ IM+PFYQ+M+T+NF LP+DD +GIQ++YG S+P
Sbjct: 914 EHSNDPSDIMSPFYQWMDTENFVLPDDDRRGIQQLYGSKSGSPTKMPPQPRTTSRPSVPD 1093
Query: 315 AXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNR 374
P PNICDGNF+T+ +LR EMFVFK++W WRVRNN+
Sbjct: 1094KPKN-------------------PAYGPNICDGNFDTVAMLRGEMFVFKERWLWRVRNNQ 1216
Query: 375 VMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGS 434
VMDGYPM I FWRGLP SI+ YE +G FVFFK +K WV + +L+PGY + + L
Sbjct: 1217VMDGYPMPIGQFWRGLPASINTAYERKDGTFVFFKGDKHWVCVEASLEPGYANHIKELVR 1396
Query: 435 GIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFV 494
G+PS ID+A++W GKTYFF+G++Y+R+ EE R++D YPK I +W+GIPESP+G+F+
Sbjct: 1397GLPSDKIDTALFWMPNGKTYFFRGNKYYRFNEEFRAVDSEYPKNIKVWEGIPESPRGSFM 1576
Query: 495 HKENGFTYFIK-EKSTGNSTKMLRVEPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDII 553
+ FTYF K K + + L+VEPGYP+S L+D+MGC P+ D + ++ II
Sbjct: 1577GSDEVFTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGC--PSGGRPDEGTEEETEVII 1750
Query: 554 IKLDNTAS-TVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
I++D S V A A+V+P +L L +L + VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1751IEVDEEGSGAVSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1918
>gb|U83918.1|OCU83918 Oryctolagus cuniculus membrane type 1 metalloproteinase mRNA,
complete cds
Length = 1760
Score = 611 bits (1575), Expect = e-173
Identities = 296/571 (51%), Positives = 392/571 (67%), Gaps = 3/571 (0%)
Frame = +3
Query: 41 FNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPR 100
F+ E WLQ+YGYLPP D R RS +++ +AIAAMQ+FYG+ +TGK D +T+ M++PR
Sbjct: 102 FSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADTDTMKAMRRPR 281
Query: 101 CGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
CGVPD+ K N+RRKRYA+ G KWQH I + I+N TPKVG+ T +AIR+AF VW+
Sbjct: 282 CGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATFEAIRKAFRVWE 461
Query: 161 NVTPLTFEEVPYIELENGK-RDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+ TPL F EV Y + +G+ + DI I FA GFHGDS+PFDGEGGFLAHAYFPGP IGGD
Sbjct: 462 SATPLRFREVHYAYIRDGREKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGD 641
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
THFDS EPWT+ N + +GND+FLVAVHELGHALGLEHSNDP+AIMAPFYQ+M+T+ F LP
Sbjct: 642 THFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTEKFLLP 821
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
+D+ +GIQ++YG S + P
Sbjct: 822 DDERRGIQQLYG-------------------SQSGSPTRCLLNPGQPSGLLFRISPGNPT 944
Query: 340 AKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
P ICDGNF+T+ + R EMFVFK++WFWRVRNN+VMDGYPM I WRGLP SI+ YE
Sbjct: 945 YGPKICDGNFDTVAVFRGEMFVFKERWFWRVRNNQVMDGYPMPIGQLWRGLPASINTAYE 1124
Query: 400 NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGD 459
+G FVFFK +K WVF + +L+PGYP + LG G+P+ ID+A++W GKTYFF+G+
Sbjct: 1125RKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGN 1304
Query: 460 RYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK-EKSTGNSTKMLRV 518
+Y+R+ EE+R++D YPK I +W+GIPESP+G+F+ + FTYF K K + + L+V
Sbjct: 1305KYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKV 1484
Query: 519 EPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDIIIKLDNTAS-TVKAIAIVIPCILALC 577
EPGYP+S L+D+MGC P D + ++ III++D S V A A+V+P +L L
Sbjct: 1485EPGYPKSALRDWMGC--PAGGRPDEGTEEETEVIIIEVDEEGSGAVSAAAVVLPVLLLLL 1658
Query: 578 LLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
+L + VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1659VLAVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1751
>dbj|AB047650.1|AB047650 Oryzias latipes MT5-MMP-del mRNA for membrane type-5 matrix
metalloproteinase-variant, complete cds
Length = 1721
Score = 607 bits (1566), Expect = e-172
Identities = 283/456 (62%), Positives = 340/456 (74%), Gaps = 1/456 (0%)
Frame = +2
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
+ WL+ YGYL P + + S L + M SA+AAMQ+FYGI +TG +D T+ WM PRCG
Sbjct: 182 IPTWLRNYGYLRPHNNQTSDLEQEKAMHSALAAMQRFYGIPVTGILDETTMQWMWTPRCG 361
Query: 103 VPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNV 162
VPDQ S + R KRYALTGQKW+ K I+YSI N TPKVG +T++AIR+AF VWQ V
Sbjct: 362 VPDQPHTSRRQ--RNKRYALTGQKWREKKISYSISNYTPKVGQKDTQRAIRQAFSVWQMV 535
Query: 163 TPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPL+F+EVPY E++ ++ DI I FASGFHGDSSPFDGEGGFLAHAYFPG GIGGDTHF
Sbjct: 536 TPLSFQEVPYSEIKKEGKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGAGIGGDTHF 715
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDD 282
DSDEPWTLGNP+ DGNDLFLVAVHELGHALGLEHSNDP+AIMAPFYQYM+T +F+LP DD
Sbjct: 716 DSDEPWTLGNPSSDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMDTRDFQLPLDD 895
Query: 283 LQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG-AK 341
LQGIQKIYG R+ + + PG K
Sbjct: 896 LQGIQKIYGVPTAMLEPTRPLPTLPSRRT--HSTSDRKHDRNSRPARPHSDRPALPGNGK 1069
Query: 342 PNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 401
PN+CDGNFNT+ RREMFVFKD+WFWR+RNN+V +GYPMQI FW+GLPP IDA YE S
Sbjct: 1070PNVCDGNFNTVAFFRREMFVFKDRWFWRLRNNKVQEGYPMQIDQFWKGLPPRIDAAYERS 1249
Query: 402 EGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRY 461
+G FVFFK +KFWVFK+ + +PGYP L+ LG +P GID+A+ WE VGKTYFFKGD+Y
Sbjct: 1250DGKFVFFKGDKFWVFKEVSAEPGYPQSLLELGRSLPKEGIDTALRWEPVGKTYFFKGDQY 1429
Query: 462 WRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKE 497
WRY EE ++DPGYPKPI++WKGIPE+PQGAF++++
Sbjct: 1430WRYNEERSTVDPGYPKPISVWKGIPEAPQGAFINRD 1537
Score = 40.4 bits (93), Expect = 0.51
Identities = 24/76 (31%), Positives = 36/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 454 YFFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKEKSTGNS 512
+ FK +WR + GYP I WKG+P A+ + F +F +K
Sbjct: 1124 FVFKDRWFWRLRNN--KVQEGYPMQIDQFWKGLPPRIDAAYERSDGKFVFFKGDKFW--V 1291
Query: 513 TKMLRVEPGYPRSILK 528
K + EPGYP+S+L+
Sbjct: 1292 FKEVSAEPGYPQSLLE 1339
>dbj|D86331.1|D86331 Human MT2-MMP gene for matrix metalloprotein, complete cds
Length = 1893
Score = 572 bits (1475), Expect = e-161
Identities = 282/576 (48%), Positives = 368/576 (62%), Gaps = 51/576 (8%)
Frame = +3
Query: 84 MTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRR--KRYALTGQKWQHKHIAYSIKNVTP 141
+TG +D T +WMK+PRCGVPDQ K N+RR KRYALTG+KW + H+ +SI+N T
Sbjct: 3 VTGVLDEETKEWMKRPRCGVPDQFGVRVKANLRRRRKRYALTGRKWNNHHLTFSIQNYTE 182
Query: 142 KVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELE-NGKRDVDITIIFASGFHGDSSPFD 200
K+G + +A+RRAF VW+ TPL F+EVPY ++ +++ DI ++FASGFHGDSSPFD
Sbjct: 183 KLGWYHSMEAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFD 362
Query: 201 GEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDP 260
G GGFLAHAYFPGPG+GGDTHFD+DEPWT + + GN+LFLVAVHELGHALGLEHS++P
Sbjct: 363 GTGGFLAHAYFPGPGLGGDTHFDADEPWTFSSTDLHGNNLFLVAVHELGHALGLEHSSNP 542
Query: 261 TAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHR---------- 310
AIMAPFYQ+ + DNFKLP DDL+GIQ++YG R
Sbjct: 543 NAIMAPFYQWKDVDNFKLPEDDLRGIQQLYGTPDGQPQPTQPLPTVTPRRPGRPDHRPPR 722
Query: 311 --SIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFVFKDQWFW 368
PP PNICDG+F+T+ +LR EMFVFK +WFW
Sbjct: 723 PPQPPPPGGKPERPPKPGPPVQPRATERPDQYGPNICDGDFDTVAMLRGEMFVFKGRWFW 902
Query: 369 RVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHD 428
RVR+NRV+D YPM I +FWRGLP I A YE +G FVFFK +++W+F++ L+PGYP
Sbjct: 903 RVRHNRVLDNYPMPIGHFWRGLPGDISAAYERQDGRFVFFKGDRYWLFREANLEPGYPQP 1082
Query: 429 LITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPES 488
L + G GIP ID+AIWWE G T+FF+ DRYWR+ EE + DPGYPKPI++W+GIP S
Sbjct: 1083LTSYGLGIPYDRIDTAIWWEPTGHTFFFQEDRYWRFNEETQRGDPGYPKPISVWQGIPAS 1262
Query: 489 PQGAFVHKENGFTYFIK-EKSTGNSTKMLRVEPGYPRSILKDFMGCD-----GPTDRDKD 542
P+GAF+ + +TYF K K + LR+EPGYP+SIL+DFMGC GP D
Sbjct: 1263PKGAFLSNDAAYTYFYKGTKYWKFDNERLRMEPGYPKSILRDFMGCQEHVEPGPRWPDVA 1442
Query: 543 R-------------HSPQDDVD-----------------IIIKLDNTASTVKAIAIVIPC 572
R S + DV ++++++ A TV + +++P
Sbjct: 1443RPPFNPHGGAEPGADSAEGDVGDGDGDFGAGVNKDRGSRVVVQMEEVARTVNVVMVLVPL 1622
Query: 573 ILALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
+L LC+L L Y + Q +R+G PR +LYCKRS+QEWV
Sbjct: 1623LLLLCVLGLTYALVQMQRKGAPRVLLYCKRSLQEWV 1730
>dbj|D85510.1|D85510 Homo sapiens mRNA for SMCP-2, partial cds
Length = 2925
Score = 502 bits (1293), Expect = e-140
Identities = 247/507 (48%), Positives = 320/507 (62%), Gaps = 49/507 (9%)
Frame = +2
Query: 151 AIRRAFDVWQNVTPLTFEEVPYIELE-NGKRDVDITIIFASGFHGDSSPFDGEGGFLAHA 209
A+RRAF VW+ TPL F+EVPY ++ +++ DI ++FASGFHGDSSPFDG GGFLAHA
Sbjct: 2 AVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHA 181
Query: 210 YFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ 269
YFPGPG+GGDTHFD+DEPWT + + GN+LFLVAVHELGHALGLEHS++P AIMAPFYQ
Sbjct: 182 YFPGPGLGGDTHFDADEPWTFSSTDLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQ 361
Query: 270 YMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHR------------SIPPAXX 317
+ + DNFKLP DDL+GIQ++YG R PP
Sbjct: 362 WKDVDNFKLPEDDLRGIQQLYGTPDGQPQPTQPLPTVTPRRPGRPDHRPPRPPQPPPPGG 541
Query: 318 XXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMD 377
PNICDG+F+T+ +LR EMFVFK +WFWRVR+NRV+D
Sbjct: 542 KPERPPKPGPPVQPRATERPDQYGPNICDGDFDTVAMLRGEMFVFKGRWFWRVRHNRVLD 721
Query: 378 GYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIP 437
YPM I +FWRGLP I A YE +G FVFFK +++W+F++ L+PGYP L + G GIP
Sbjct: 722 NYPMPIGHFWRGLPGDISAAYERQDGRFVFFKGDRYWLFREANLEPGYPQPLTSYGLGIP 901
Query: 438 SHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKE 497
ID+AIWWE G T+FF+ DRYWR+ EE + DPGYPKPI++W+GIP SP+GAF+ +
Sbjct: 902 YDRIDTAIWWEPTGHTFFFQEDRYWRFNEETQRGDPGYPKPISVWQGIPASPKGAFLSND 1081
Query: 498 NGFTYFIK-EKSTGNSTKMLRVEPGYPRSILKDFMGCD-----GPTDRDKDR-------- 543
+TYF K K + LR+EPGYP+SIL+DFMGC GP D R
Sbjct: 1082AAYTYFYKGTKYWKFDNERLRMEPGYPKSILRDFMGCQEHVEPGPRWPDVARPPFNPHGG 1261
Query: 544 -----HSPQDDVD-----------------IIIKLDNTASTVKAIAIVIPCILALCLLVL 581
S + DV ++++++ A TV + +++P +L LC+L L
Sbjct: 1262AEPGADSAEGDVGDGDGDFGAGVNKDGGSRVVVQMEEVARTVNVVMVLVPLLLLLCVLGL 1441
Query: 582 VYTVFQFKREGTPRHILYCKRSMQEWV 608
Y + Q +R+G PR +LYCKRS+QEWV
Sbjct: 1442TYALVQMQRKGAPRVLLYCKRSLQEWV 1522
>gb|AF267160.1|AF267160 Ovis aries membrane type-1 metalloproteinase mRNA, partial cds
Length = 788
Score = 335 bits (859), Expect = 8e-90
Identities = 159/279 (56%), Positives = 193/279 (68%), Gaps = 1/279 (0%)
Frame = +1
Query: 170 VPYIELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPW 228
VPY + G ++ DI I FA GFHGDS+PFDGEGGFLAHAYFPGP IGGDTHFDS EPW
Sbjct: 1 VPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPW 180
Query: 229 TLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQK 288
T+ N + +GND+FLVAVHELGHALGLEHSNDP+AIMAPFYQ+M+T+NF LP+DD +GIQ+
Sbjct: 181 TVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTENFVLPDDDRRGIQQ 360
Query: 289 IYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGN 348
+YG SIP P PNICDGN
Sbjct: 361 LYGSKSGSPTKIPPQPRTTSRPSIP-------------------DKPKNPTYGPNICDGN 483
Query: 349 FNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFF 408
F+T+ +LR EMFVFK++WFWRVR N+VMDGYPM I FWRGLP SI+ YE +G FVFF
Sbjct: 484 FDTVAMLRGEMFVFKERWFWRVRKNQVMDGYPMPIGQFWRGLPASINTAYERKDGKFVFF 663
Query: 409 KSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWW 447
K +K WVF + +L+PGYP + LG G+P+ ID+A++W
Sbjct: 664 KGDKHWVFDEASLEPGYPKHIKELGRGLPTDRIDAALFW 780
Score = 47.0 bits (110), Expect = 0.005
Identities = 33/90 (36%), Positives = 47/90 (51%), Gaps = 1/90 (1%)
Frame = +1
Query: 451 GKTYFFKGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFIKEKST 509
G+ + FK +WR + + MD GYP PI W+G+P S A+ K+ F +F +K
Sbjct: 508 GEMFVFKERWFWRVRKN-QVMD-GYPMPIGQFWRGLPASINTAYERKDGKFVFFKGDKHW 681
Query: 510 GNSTKMLRVEPGYPRSILKDFMGCDGPTDR 539
L EPGYP+ I + +G PTDR
Sbjct: 682 VFDEASL--EPGYPKHIKE--LGRGLPTDR 759
>emb|AJ010731.1|MAJ10731 Mus musculus mRNA for membrane-type-4 matrix metalloproteinase
(MT4-MMP)
Length = 1987
Score = 318 bits (814), Expect = 1e-84
Identities = 192/548 (35%), Positives = 269/548 (49%), Gaps = 13/548 (2%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL ++GYLPP DP L++ E + AI AMQQF G+ TG +D T+ MK PRC +PD
Sbjct: 243 WLSRFGYLPPADPASGQLQTQEELSKAITAMQQFGGLETTGILDEATLALMKTPRCSLPD 422
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVT--PKVGDAETRKAIRRAFDVWQNVT 163
G+ RRKR KW +++++ ++ +G R + A VW ++T
Sbjct: 423 LPPGAQS---RRKRQTPPPTKWSKRNLSWRVRTFPRDSPLGRDTVRALMYYALKVWSDIT 593
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
PL F EV DI I F+ H D PFDG GG +AHA+FPG GDTHF
Sbjct: 594 PLNFHEV-------AGNAADIQIDFSKADHNDGYPFDGPGGTVAHAFFPGDHHTAGDTHF 752
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD--NFKLPN 280
D DEPWT + + G DLF VAVHE GHA+GL H P++IM P+YQ D + LP
Sbjct: 753 DDDEPWTFRSSDAHGMDLFAVAVHEFGHAIGLSHVAAPSSIMQPYYQGPVGDPLRYGLPY 932
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
+D + ++YG + P S P
Sbjct: 933 EDRVRVWQLYGVRESVSPTAQLDTPEPEEPPLLP--------------EPPNNRSSTPPQ 1070
Query: 341 K--PNICDGNFNTLVILRREMFVFKDQWFWRV-RNNRVMDGYPMQITYFWRGLP---PSI 394
K P+ C +F+ + +R E F FK ++FWR+ R+ ++ P Q+ FWRGLP S+
Sbjct: 1071KDVPHRCTAHFDAVAQIRGEAFFFKGKYFWRLTRDRHLVSLQPAQMHRFWRGLPLHLDSV 1250
Query: 395 DAVYE-NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKT 453
DAVYE S+ VFFK +++WVFKD ++ GYP + +P GID+ W +T
Sbjct: 1251DAVYERTSDHKIVFFKGDRYWVFKDNNVEEGYPRPVSDF--SLPPGGIDAVFSWAHNDRT 1424
Query: 454 YFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNST 513
YFFK YWRY + R MDPGYP +W+G+P A + +F ++
Sbjct: 1425YFFKDQLYWRYDDHTRRMDPGYPAQGPLWRGVPSMLDDAMRWSDGASYFFRGQEYWKVLD 1604
Query: 514 KMLRVEPGYPRSILKDFMGCDGP-TDRDKDRHSPQDDVDIIIKLDNTASTVKAIAIVIPC 572
L PGYP+S +D++ C P D + PQ L + T A + +P
Sbjct: 1605GELEAAPGYPQSTARDWLVCGEPLADAEDVGPGPQGRSGAQDGLAVCSCTSDAHRLALPS 1784
Query: 573 ILALCLLV 580
+L L L+
Sbjct: 1785LLLLTPLL 1808
>ref|NM_011846.1| Mus musculus matrix metalloproteinase 17 (Mmp17), mRNA
Length = 3490
Score = 318 bits (814), Expect = 1e-84
Identities = 192/548 (35%), Positives = 269/548 (49%), Gaps = 13/548 (2%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL ++GYLPP DP L++ E + AI AMQQF G+ TG +D T+ MK PRC +PD
Sbjct: 245 WLSRFGYLPPADPASGQLQTQEELSKAITAMQQFGGLETTGILDEATLALMKTPRCSLPD 424
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVT--PKVGDAETRKAIRRAFDVWQNVT 163
G+ RRKR KW +++++ ++ +G R + A VW ++T
Sbjct: 425 LPPGAQS---RRKRQTPPPTKWSKRNLSWRVRTFPRDSPLGRDTVRALMYYALKVWSDIT 595
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
PL F EV DI I F+ H D PFDG GG +AHA+FPG GDTHF
Sbjct: 596 PLNFHEV-------AGNAADIQIDFSKADHNDGYPFDGPGGTVAHAFFPGDHHTAGDTHF 754
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD--NFKLPN 280
D DEPWT + + G DLF VAVHE GHA+GL H P++IM P+YQ D + LP
Sbjct: 755 DDDEPWTFRSSDAHGMDLFAVAVHEFGHAIGLSHVAAPSSIMQPYYQGPVGDPVRYGLPY 934
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
+D + ++YG + P S P
Sbjct: 935 EDRVRVWQLYGVRESVSPTAQLDTPEPEEPPLLP--------------EPPNNRSSTPPQ 1072
Query: 341 K--PNICDGNFNTLVILRREMFVFKDQWFWRV-RNNRVMDGYPMQITYFWRGLP---PSI 394
K P+ C +F+ + +R E F FK ++FWR+ R+ ++ P Q+ FWRGLP S+
Sbjct: 1073KDVPHRCTAHFDAVAQIRGEAFFFKGKYFWRLTRDRHLVSLQPAQMHRFWRGLPLHLDSV 1252
Query: 395 DAVYE-NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKT 453
DAVYE S+ VFFK +++WVFKD ++ GYP + +P GID+ W +T
Sbjct: 1253DAVYERTSDHKIVFFKGDRYWVFKDNNVEEGYPRPVSDF--SLPPGGIDAVFSWAHNDRT 1426
Query: 454 YFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNST 513
YFFK YWRY + R MDPGYP +W+G+P A + +F ++
Sbjct: 1427YFFKDQLYWRYDDHTRRMDPGYPAQGPLWRGVPSMLDDAMRWSDGASYFFRGQEYWKVLD 1606
Query: 514 KMLRVEPGYPRSILKDFMGCDGP-TDRDKDRHSPQDDVDIIIKLDNTASTVKAIAIVIPC 572
L PGYP+S +D++ C P D + PQ L + T A + +P
Sbjct: 1607GELEAAPGYPQSTARDWLVCGEPLADAEDVGPGPQGRSGAQDGLAVCSCTSDAHRLALPS 1786
Query: 573 ILALCLLV 580
+L L L+
Sbjct: 1787LLLLTPLL 1810
>dbj|AB021224.1|AB021224 Mus musculus mRNA for membrane-type-4 matrix metalloproteinase,
complete cds
Length = 3490
Score = 318 bits (814), Expect = 1e-84
Identities = 192/548 (35%), Positives = 269/548 (49%), Gaps = 13/548 (2%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL ++GYLPP DP L++ E + AI AMQQF G+ TG +D T+ MK PRC +PD
Sbjct: 245 WLSRFGYLPPADPASGQLQTQEELSKAITAMQQFGGLETTGILDEATLALMKTPRCSLPD 424
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVT--PKVGDAETRKAIRRAFDVWQNVT 163
G+ RRKR KW +++++ ++ +G R + A VW ++T
Sbjct: 425 LPPGAQS---RRKRQTPPPTKWSKRNLSWRVRTFPRDSPLGRDTVRALMYYALKVWSDIT 595
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
PL F EV DI I F+ H D PFDG GG +AHA+FPG GDTHF
Sbjct: 596 PLNFHEV-------AGNAADIQIDFSKADHNDGYPFDGPGGTVAHAFFPGDHHTAGDTHF 754
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD--NFKLPN 280
D DEPWT + + G DLF VAVHE GHA+GL H P++IM P+YQ D + LP
Sbjct: 755 DDDEPWTFRSSDAHGMDLFAVAVHEFGHAIGLSHVAAPSSIMQPYYQGPVGDPVRYGLPY 934
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
+D + ++YG + P S P
Sbjct: 935 EDRVRVWQLYGVRESVSPTAQLDTPEPEEPPLLP--------------EPPNNRSSTPPQ 1072
Query: 341 K--PNICDGNFNTLVILRREMFVFKDQWFWRV-RNNRVMDGYPMQITYFWRGLP---PSI 394
K P+ C +F+ + +R E F FK ++FWR+ R+ ++ P Q+ FWRGLP S+
Sbjct: 1073KDVPHRCTAHFDAVAQIRGEAFFFKGKYFWRLTRDRHLVSLQPAQMHRFWRGLPLHLDSV 1252
Query: 395 DAVYE-NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKT 453
DAVYE S+ VFFK +++WVFKD ++ GYP + +P GID+ W +T
Sbjct: 1253DAVYERTSDHKIVFFKGDRYWVFKDNNVEEGYPRPVSDF--SLPPGGIDAVFSWAHNDRT 1426
Query: 454 YFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNST 513
YFFK YWRY + R MDPGYP +W+G+P A + +F ++
Sbjct: 1427YFFKDQLYWRYDDHTRRMDPGYPAQGPLWRGVPSMLDDAMRWSDGASYFFRGQEYWKVLD 1606
Query: 514 KMLRVEPGYPRSILKDFMGCDGP-TDRDKDRHSPQDDVDIIIKLDNTASTVKAIAIVIPC 572
L PGYP+S +D++ C P D + PQ L + T A + +P
Sbjct: 1607GELEAAPGYPQSTARDWLVCGEPLADAEDVGPGPQGRSGAQDGLAVCSCTSDAHRLALPS 1786
Query: 573 ILALCLLV 580
+L L L+
Sbjct: 1787LLLLTPLL 1810
>gb|AF185270.1|AF185270 Homo sapiens leukolysin (MMP25) mRNA, complete cds
Length = 2667
Score = 317 bits (812), Expect = 2e-84
Identities = 185/513 (36%), Positives = 268/513 (52%), Gaps = 11/513 (2%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL +YGYLPP P + L+S E ++ AI MQ+F G+ TG++D T+ M+KPRC +PD
Sbjct: 127 WLTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPD 306
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNV--TPKVGDAETRKAIRRAFDVWQNVT 163
G + RR+RYAL+G W+ + + + +++ + ++ R + A W +
Sbjct: 307 -VLGVAGLVRRRRRYALSGSVWKKRTLTWRVRSFPQSSQLSQETVRVLMSYALMAWGMES 483
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
LTF EV + ++ DI I FA FH DS PFDG GG LAHA+FPG I GDTHF
Sbjct: 484 GLTFHEVDSPQ----GQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHF 651
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ--YMETDNFKLPN 280
D +E WT G+ + +G DLF VAVHE GHALGL HS+ P +IM PFYQ + D ++L
Sbjct: 652 DDEETWTFGSKDGEGTDLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGDPDKYRLSQ 831
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD G+Q++YG PPA S+P
Sbjct: 832 DDRDGLQQLYGKAPQTPYDKPTRKPLAPPPQ-PPA--------------SPTHSPSFP-- 960
Query: 341 KPNICDGNFNTLVILRREMFVFKDQWFWRVR-NNRVMDGYPMQITYFWRGLPPSIDAVY- 398
P+ C+GNF+ + +R E F FK WFWR++ + +++ P ++ FW GLP + V
Sbjct: 961 IPDRCEGNFDAIANIRGETFFFKGPWFWRLQPSGQLVSPRPARLHRFWEGLPAQVRVVQA 1140
Query: 399 ---ENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYF 455
+ +G + F +FWVF+D L+ G L LG P +D+ W GKTY
Sbjct: 1141AYARHRDGRILLFSGPQFWVFQDRQLEGG-ARPLTELGLP-PGEEVDAVFSWPQNGKTYL 1314
Query: 456 FKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTK- 514
+G +YWRY E DPGYP+ +++W+G P SP V G TYF K K
Sbjct: 1315VRGRQYWRYDEAAARPDPGYPRDLSLWEGAPPSPDDVTV-SNAGDTYFFKGAHYWRFPKN 1491
Query: 515 MLRVEPGYPRSILKDFMGCDGPTDRDKDRHSPQ 547
++ EP P+ + +++ C P+ + P+
Sbjct: 1492SIKTEPDAPQPMGPNWLDCPAPSSGPRAPRPPK 1590
>gb|AF145442.2|AF145442 Homo sapiens leukolysin mRNA, complete cds
Length = 2667
Score = 317 bits (812), Expect = 2e-84
Identities = 185/513 (36%), Positives = 268/513 (52%), Gaps = 11/513 (2%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL +YGYLPP P + L+S E ++ AI MQ+F G+ TG++D T+ M+KPRC +PD
Sbjct: 127 WLTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPD 306
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNV--TPKVGDAETRKAIRRAFDVWQNVT 163
G + RR+RYAL+G W+ + + + +++ + ++ R + A W +
Sbjct: 307 -VLGVAGLVRRRRRYALSGSVWKKRTLTWRVRSFPQSSQLSQETVRVLMSYALMAWGMES 483
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
LTF EV + ++ DI I FA FH DS PFDG GG LAHA+FPG I GDTHF
Sbjct: 484 GLTFHEVDSPQ----GQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHF 651
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ--YMETDNFKLPN 280
D +E WT G+ + +G DLF VAVHE GHALGL HS+ P +IM PFYQ + D ++L
Sbjct: 652 DDEETWTFGSKDGEGTDLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGDPDKYRLSQ 831
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD G+Q++YG PPA S+P
Sbjct: 832 DDRDGLQQLYGKAPQTPYDKPTRKPLAPPPQ-PPA--------------SPTHSPSFP-- 960
Query: 341 KPNICDGNFNTLVILRREMFVFKDQWFWRVR-NNRVMDGYPMQITYFWRGLPPSIDAVY- 398
P+ C+GNF+ + +R E F FK WFWR++ + +++ P ++ FW GLP + V
Sbjct: 961 IPDRCEGNFDAIANIRGETFFFKGPWFWRLQPSGQLVSPRPARLHRFWEGLPAQVRVVQA 1140
Query: 399 ---ENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYF 455
+ +G + F +FWVF+D L+ G L LG P +D+ W GKTY
Sbjct: 1141AYARHRDGRILLFSGPQFWVFQDRQLEGG-ARPLTELGLP-PGEEVDAVFSWPQNGKTYL 1314
Query: 456 FKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTK- 514
+G +YWRY E DPGYP+ +++W+G P SP V G TYF K K
Sbjct: 1315VRGRQYWRYDEAAARPDPGYPRDLSLWEGAPPSPDDVTV-SNAGDTYFFKGAHYWRFPKN 1491
Query: 515 MLRVEPGYPRSILKDFMGCDGPTDRDKDRHSPQ 547
++ EP P+ + +++ C P+ + P+
Sbjct: 1492SIKTEPDAPQPMGPNWLDCPAPSSGPRAPRPPK 1590
>ref|NM_022468.2| Homo sapiens matrix metalloproteinase 25 (MMP25), transcript
variant 1, mRNA
Length = 3557
Score = 317 bits (812), Expect = 2e-84
Identities = 185/513 (36%), Positives = 268/513 (52%), Gaps = 11/513 (2%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL +YGYLPP P + L+S E ++ AI MQ+F G+ TG++D T+ M+KPRC +PD
Sbjct: 340 WLTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPD 519
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNV--TPKVGDAETRKAIRRAFDVWQNVT 163
G + RR+RYAL+G W+ + + + +++ + ++ R + A W +
Sbjct: 520 -VLGVAGLVRRRRRYALSGSVWKKRTLTWRVRSFPQSSQLSQETVRVLMSYALMAWGMES 696
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
LTF EV + ++ DI I FA FH DS PFDG GG LAHA+FPG I GDTHF
Sbjct: 697 GLTFHEVDSPQ----GQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHF 864
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ--YMETDNFKLPN 280
D +E WT G+ + +G DLF VAVHE GHALGL HS+ P +IM PFYQ + D ++L
Sbjct: 865 DDEETWTFGSKDGEGTDLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGDPDKYRLSQ 1044
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD G+Q++YG PPA S+P
Sbjct: 1045DDRDGLQQLYGKAPQTPYDKPTRKPLAPPPQ-PPA--------------SPTHSPSFP-- 1173
Query: 341 KPNICDGNFNTLVILRREMFVFKDQWFWRVR-NNRVMDGYPMQITYFWRGLPPSIDAVY- 398
P+ C+GNF+ + +R E F FK WFWR++ + +++ P ++ FW GLP + V
Sbjct: 1174IPDRCEGNFDAIANIRGETFFFKGPWFWRLQPSGQLVSPRPARLHRFWEGLPAQVRVVQA 1353
Query: 399 ---ENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYF 455
+ +G + F +FWVF+D L+ G L LG P +D+ W GKTY
Sbjct: 1354AYARHRDGRILLFSGPQFWVFQDRQLEGG-ARPLTELGLP-PGEEVDAVFSWPQNGKTYL 1527
Query: 456 FKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTK- 514
+G +YWRY E DPGYP+ +++W+G P SP V G TYF K K
Sbjct: 1528VRGRQYWRYDEAAARPDPGYPRDLSLWEGAPPSPDDVTV-SNAGDTYFFKGAHYWRFPKN 1704
Query: 515 MLRVEPGYPRSILKDFMGCDGPTDRDKDRHSPQ 547
++ EP P+ + +++ C P+ + P+
Sbjct: 1705SIKTEPDAPQPMGPNWLDCPAPSSGPRAPRPPK 1803
>emb|AJ272137.1|HSA272137 Homo sapiens mRNA for membrane type matrix metalloproteinase number
6, (MT6-MMP gene)
Length = 3586
Score = 317 bits (812), Expect = 2e-84
Identities = 185/513 (36%), Positives = 268/513 (52%), Gaps = 11/513 (2%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL +YGYLPP P + L+S E ++ AI MQ+F G+ TG++D T+ M+KPRC +PD
Sbjct: 340 WLTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPD 519
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNV--TPKVGDAETRKAIRRAFDVWQNVT 163
G + RR+RYAL+G W+ + + + +++ + ++ R + A W +
Sbjct: 520 -VLGVAGLVRRRRRYALSGSVWKKRTLTWRVRSFPQSSQLSQETVRVLMSYALMAWGMES 696
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
LTF EV + ++ DI I FA FH DS PFDG GG LAHA+FPG I GDTHF
Sbjct: 697 GLTFHEVDSPQ----GQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHF 864
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ--YMETDNFKLPN 280
D +E WT G+ + +G DLF VAVHE GHALGL HS+ P +IM PFYQ + D ++L
Sbjct: 865 DDEETWTFGSKDGEGTDLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGDPDKYRLSQ 1044
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD G+Q++YG PPA S+P
Sbjct: 1045DDRDGLQQLYGKAPQTPYDKPTRKPLAPPPQ-PPA--------------SPTHSPSFP-- 1173
Query: 341 KPNICDGNFNTLVILRREMFVFKDQWFWRVR-NNRVMDGYPMQITYFWRGLPPSIDAVY- 398
P+ C+GNF+ + +R E F FK WFWR++ + +++ P ++ FW GLP + V
Sbjct: 1174IPDRCEGNFDAIANIRGETFFFKGPWFWRLQPSGQLVSPRPARLHRFWEGLPAQVRVVQA 1353
Query: 399 ---ENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYF 455
+ +G + F +FWVF+D L+ G L LG P +D+ W GKTY
Sbjct: 1354AYARHRDGRILLFSGPQFWVFQDRQLEGG-ARPLTELGLP-PGEEVDAVFSWPQNGKTYL 1527
Query: 456 FKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTK- 514
+G +YWRY E DPGYP+ +++W+G P SP V G TYF K K
Sbjct: 1528VRGRQYWRYDEAAARPDPGYPRDLSLWEGAPPSPDDVTV-SNAGDTYFFKGAHYWRFPKN 1704
Query: 515 MLRVEPGYPRSILKDFMGCDGPTDRDKDRHSPQ 547
++ EP P+ + +++ C P+ + P+
Sbjct: 1705SIKTEPDAPQPMGPNWLDCPAPSSGPRAPRPPK 1803
>emb|AJ239053.1|HSA239053 Homo sapiens mRNA for matrix metalloproteinase-25 (MMP-25)
Length = 2917
Score = 317 bits (812), Expect = 2e-84
Identities = 185/513 (36%), Positives = 268/513 (52%), Gaps = 11/513 (2%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL +YGYLPP P + L+S E ++ AI MQ+F G+ TG++D T+ M+KPRC +PD
Sbjct: 284 WLTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPD 463
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNV--TPKVGDAETRKAIRRAFDVWQNVT 163
G + RR+RYAL+G W+ + + + +++ + ++ R + A W +
Sbjct: 464 -VLGVAGLVRRRRRYALSGSVWKKRTLTWRVRSFPQSSQLSQETVRVLMSYALMAWGMES 640
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
LTF EV + ++ DI I FA FH DS PFDG GG LAHA+FPG I GDTHF
Sbjct: 641 GLTFHEVDSPQ----GQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHF 808
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ--YMETDNFKLPN 280
D +E WT G+ + +G DLF VAVHE GHALGL HS+ P +IM PFYQ + D ++L
Sbjct: 809 DDEETWTFGSKDGEGTDLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGDPDKYRLSQ 988
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD G+Q++YG PPA S+P
Sbjct: 989 DDRDGLQQLYGKAPQTPYDKPTRKPLAPPPQ-PPA--------------SPTHSPSFP-- 1117
Query: 341 KPNICDGNFNTLVILRREMFVFKDQWFWRVR-NNRVMDGYPMQITYFWRGLPPSIDAVY- 398
P+ C+GNF+ + +R E F FK WFWR++ + +++ P ++ FW GLP + V
Sbjct: 1118IPDRCEGNFDAIANIRGETFFFKGPWFWRLQPSGQLVSPRPARLHRFWEGLPAQVRVVQA 1297
Query: 399 ---ENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYF 455
+ +G + F +FWVF+D L+ G L LG P +D+ W GKTY
Sbjct: 1298AYARHRDGRILLFSGPQFWVFQDRQLEGG-ARPLTELGLP-PGEEVDAVFSWPQNGKTYL 1471
Query: 456 FKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTK- 514
+G +YWRY E DPGYP+ +++W+G P SP V G TYF K K
Sbjct: 1472VRGRQYWRYDEAAARPDPGYPRDLSLWEGAPPSPDDVTV-SNAGDTYFFKGAHYWRFPKN 1648
Query: 515 MLRVEPGYPRSILKDFMGCDGPTDRDKDRHSPQ 547
++ EP P+ + +++ C P+ + P+
Sbjct: 1649SIKTEPDAPQPMGPNWLDCPAPSSGPRAPRPPK 1747
>ref|NM_022718.1| Homo sapiens matrix metalloproteinase 25 (MMP25), transcript
variant 2, mRNA
Length = 2973
Score = 317 bits (812), Expect = 2e-84
Identities = 185/513 (36%), Positives = 268/513 (52%), Gaps = 11/513 (2%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL +YGYLPP P + L+S E ++ AI MQ+F G+ TG++D T+ M+KPRC +PD
Sbjct: 340 WLTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPD 519
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNV--TPKVGDAETRKAIRRAFDVWQNVT 163
G + RR+RYAL+G W+ + + + +++ + ++ R + A W +
Sbjct: 520 -VLGVAGLVRRRRRYALSGSVWKKRTLTWRVRSFPQSSQLSQETVRVLMSYALMAWGMES 696
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
LTF EV + ++ DI I FA FH DS PFDG GG LAHA+FPG I GDTHF
Sbjct: 697 GLTFHEVDSPQ----GQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHF 864
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ--YMETDNFKLPN 280
D +E WT G+ + +G DLF VAVHE GHALGL HS+ P +IM PFYQ + D ++L
Sbjct: 865 DDEETWTFGSKDGEGTDLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGDPDKYRLSQ 1044
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD G+Q++YG PPA S+P
Sbjct: 1045DDRDGLQQLYGKAPQTPYDKPTRKPLAPPPQ-PPA--------------SPTHSPSFP-- 1173
Query: 341 KPNICDGNFNTLVILRREMFVFKDQWFWRVR-NNRVMDGYPMQITYFWRGLPPSIDAVY- 398
P+ C+GNF+ + +R E F FK WFWR++ + +++ P ++ FW GLP + V
Sbjct: 1174IPDRCEGNFDAIANIRGETFFFKGPWFWRLQPSGQLVSPRPARLHRFWEGLPAQVRVVQA 1353
Query: 399 ---ENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYF 455
+ +G + F +FWVF+D L+ G L LG P +D+ W GKTY
Sbjct: 1354AYARHRDGRILLFSGPQFWVFQDRQLEGG-ARPLTELGLP-PGEEVDAVFSWPQNGKTYL 1527
Query: 456 FKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTK- 514
+G +YWRY E DPGYP+ +++W+G P SP V G TYF K K
Sbjct: 1528VRGRQYWRYDEAAARPDPGYPRDLSLWEGAPPSPDDVTV-SNAGDTYFFKGAHYWRFPKN 1704
Query: 515 MLRVEPGYPRSILKDFMGCDGPTDRDKDRHSPQ 547
++ EP P+ + +++ C P+ + P+
Sbjct: 1705SIKTEPDAPQPMGPNWLDCPAPSSGPRAPRPPK 1803
>dbj|AB042328.1|AB042328 Homo sapiens mt6-mmp mRNA for membrane-type 6 matrix
metalloproteinase, complete cds
Length = 3311
Score = 313 bits (803), Expect = 2e-83
Identities = 184/513 (35%), Positives = 267/513 (51%), Gaps = 11/513 (2%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL +YGYLPP + L+S E ++ AI MQ+F G+ TG++D T+ M+KPRC +PD
Sbjct: 272 WLTRYGYLPPPHRAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPD 451
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNV--TPKVGDAETRKAIRRAFDVWQNVT 163
G + RR+RYAL+G W+ + + + +++ + ++ R + A W +
Sbjct: 452 -VLGVAGLVRRRRRYALSGSVWKKRTLTWRVRSFPQSSQLSQETVRVLMSYALMAWGMES 628
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
LTF EV + ++ DI I FA FH DS PFDG GG LAHA+FPG I GDTHF
Sbjct: 629 GLTFHEVDSPQ----GQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHF 796
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ--YMETDNFKLPN 280
D +E WT G+ + +G DLF VAVHE GHALGL HS+ P +IM PFYQ + D ++L
Sbjct: 797 DDEETWTFGSKDGEGTDLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGDPDKYRLSQ 976
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD G+Q++YG PPA S+P
Sbjct: 977 DDRDGLQQLYGKAPQTPYDKPTRKPLAPPPQ-PPA--------------SPTHSPSFP-- 1105
Query: 341 KPNICDGNFNTLVILRREMFVFKDQWFWRVR-NNRVMDGYPMQITYFWRGLPPSIDAVY- 398
P+ C+GNF+ + +R E F FK WFWR++ + +++ P ++ FW GLP + V
Sbjct: 1106IPDRCEGNFDAIANIRGETFFFKGPWFWRLQPSGQLVSPRPARLHRFWEGLPAQVRVVQA 1285
Query: 399 ---ENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYF 455
+ +G + F +FWVF+D L+ G L LG P +D+ W GKTY
Sbjct: 1286AYARHRDGRILLFSGPQFWVFQDRQLEGG-ARPLTELGLP-PGEEVDAVFSWPQNGKTYL 1459
Query: 456 FKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTK- 514
+G +YWRY E DPGYP+ +++W+G P SP V G TYF K K
Sbjct: 1460VRGRQYWRYDEAAARPDPGYPRDLSLWEGAPPSPDDVTV-SNAGDTYFFKGAHYWRFPKN 1636
Query: 515 MLRVEPGYPRSILKDFMGCDGPTDRDKDRHSPQ 547
++ EP P+ + +++ C P+ + P+
Sbjct: 1637SIKTEPDAPQPMGPNWLDCPAPSSGPRAPRPPK 1735
>emb|X89576.1|HSMMP17 Homo sapiens mRNA for putative MT2-MMP protein
Length = 2306
Score = 304 bits (779), Expect = 1e-80
Identities = 180/500 (36%), Positives = 250/500 (50%), Gaps = 12/500 (2%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL ++GYLPP DP L++ E + AI AMQQF G+ TG +D T+ MK PRC +PD
Sbjct: 143 WLSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPD 322
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNV--TPKVGDAETRKAIRRAFDVWQNVT 163
RR+R A KW +++++ ++ +G R + A VW ++
Sbjct: 323 L---PVLTQARRRRQAPAPTKWNKRNLSWRVRTFPRDSPLGHDTVRALMYYALKVWSDIA 493
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPG-PGIGGDTHF 222
PL F EV DI I F+ H D PFDG GG +AHA+FPG GDTHF
Sbjct: 494 PLNFHEV-------AGSTADIQIDFSKADHNDGYPFDGPGGTVAHAFFPGHHHTAGDTHF 652
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD--NFKLPN 280
D DE WT + + G DLF VAVHE GHA+GL H +IM P+YQ D + LP
Sbjct: 653 DDDEAWTFRSSDAHGMDLFAVAVHEFGHAIGLSHVAAAHSIMRPYYQGPVGDPLRYGLPY 832
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
+D + ++YG PP S P
Sbjct: 833 EDKVRVWQLYGVRESVSPTAQPEEPPLLPE--PP-----------------DNRSSAPPR 955
Query: 341 K--PNICDGNFNTLVILRREMFVFKDQWFWRV-RNNRVMDGYPMQITYFWRGLP---PSI 394
K P+ C +F+ + +R E F FK ++FWR+ R+ ++ P Q+ FWRGLP S+
Sbjct: 956 KDVPHRCSTHFDAVAQIRGEAFFFKGKYFWRLTRDRHLVSLQPAQMHRFWRGLPLHLDSV 1135
Query: 395 DAVYE-NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKT 453
DAVYE S+ VFFK +++WVFKD ++ GYP + +P GID+A W +T
Sbjct: 1136DAVYERTSDHKIVFFKGDRYWVFKDNNVEEGYPRPVSDF--SLPPGGIDAAFSWAHNDRT 1309
Query: 454 YFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNST 513
YFFK YWRY + R MDPGYP +W+G+P + A + +F ++
Sbjct: 1310YFFKDQLYWRYDDHTRHMDPGYPAQSPLWRGVPSTLDDAMRWSDGASYFFRGQEYWKVLD 1489
Query: 514 KMLRVEPGYPRSILKDFMGC 533
L V PGYP+S +D++ C
Sbjct: 1490GELEVAPGYPQSTARDWLVC 1549
>ref|NM_016155.2| Homo sapiens matrix metalloproteinase 17 (membrane-inserted)
(MMP17), mRNA
Length = 2438
Score = 304 bits (779), Expect = 1e-80
Identities = 180/500 (36%), Positives = 250/500 (50%), Gaps = 12/500 (2%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL ++GYLPP DP L++ E + AI AMQQF G+ TG +D T+ MK PRC +PD
Sbjct: 271 WLSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPD 450
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNV--TPKVGDAETRKAIRRAFDVWQNVT 163
RR+R A KW +++++ ++ +G R + A VW ++
Sbjct: 451 L---PVLTQARRRRQAPAPTKWNKRNLSWRVRTFPRDSPLGHDTVRALMYYALKVWSDIA 621
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPG-PGIGGDTHF 222
PL F EV DI I F+ H D PFDG GG +AHA+FPG GDTHF
Sbjct: 622 PLNFHEV-------AGSTADIQIDFSKADHNDGYPFDGPGGTVAHAFFPGHHHTAGDTHF 780
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD--NFKLPN 280
D DE WT + + G DLF VAVHE GHA+GL H +IM P+YQ D + LP
Sbjct: 781 DDDEAWTFRSSDAHGMDLFAVAVHEFGHAIGLSHVAAAHSIMRPYYQGPVGDPLRYGLPY 960
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
+D + ++YG PP S P
Sbjct: 961 EDKVRVWQLYGVRESVSPTAQPEEPPLLPE--PP-----------------DNRSSAPPR 1083
Query: 341 K--PNICDGNFNTLVILRREMFVFKDQWFWRV-RNNRVMDGYPMQITYFWRGLP---PSI 394
K P+ C +F+ + +R E F FK ++FWR+ R+ ++ P Q+ FWRGLP S+
Sbjct: 1084KDVPHRCSTHFDAVAQIRGEAFFFKGKYFWRLTRDRHLVSLQPAQMHRFWRGLPLHLDSV 1263
Query: 395 DAVYE-NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKT 453
DAVYE S+ VFFK +++WVFKD ++ GYP + +P GID+A W +T
Sbjct: 1264DAVYERTSDHKIVFFKGDRYWVFKDNNVEEGYPRPVSDF--SLPPGGIDAAFSWAHNDRT 1437
Query: 454 YFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNST 513
YFFK YWRY + R MDPGYP +W+G+P + A + +F ++
Sbjct: 1438YFFKDQLYWRYDDHTRHMDPGYPAQSPLWRGVPSTLDDAMRWSDGASYFFRGQEYWKVLD 1617
Query: 514 KMLRVEPGYPRSILKDFMGC 533
L V PGYP+S +D++ C
Sbjct: 1618GELEVAPGYPQSTARDWLVC 1677
>dbj|AB021225.2| Homo sapiens mt4-mmp mRNA for membrane-type-4 matrix
metalloproteinase, complete cds
Length = 2438
Score = 304 bits (779), Expect = 1e-80
Identities = 180/500 (36%), Positives = 250/500 (50%), Gaps = 12/500 (2%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL ++GYLPP DP L++ E + AI AMQQF G+ TG +D T+ MK PRC +PD
Sbjct: 271 WLSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPD 450
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNV--TPKVGDAETRKAIRRAFDVWQNVT 163
RR+R A KW +++++ ++ +G R + A VW ++
Sbjct: 451 L---PVLTQARRRRQAPAPTKWNKRNLSWRVRTFPRDSPLGHDTVRALMYYALKVWSDIA 621
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPG-PGIGGDTHF 222
PL F EV DI I F+ H D PFDG GG +AHA+FPG GDTHF
Sbjct: 622 PLNFHEV-------AGSTADIQIDFSKADHNDGYPFDGPGGTVAHAFFPGHHHTAGDTHF 780
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD--NFKLPN 280
D DE WT + + G DLF VAVHE GHA+GL H +IM P+YQ D + LP
Sbjct: 781 DDDEAWTFRSSDAHGMDLFAVAVHEFGHAIGLSHVAAAHSIMRPYYQGPVGDPLRYGLPY 960
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
+D + ++YG PP S P
Sbjct: 961 EDKVRVWQLYGVRESVSPTAQPEEPPLLPE--PP-----------------DNRSSAPPR 1083
Query: 341 K--PNICDGNFNTLVILRREMFVFKDQWFWRV-RNNRVMDGYPMQITYFWRGLP---PSI 394
K P+ C +F+ + +R E F FK ++FWR+ R+ ++ P Q+ FWRGLP S+
Sbjct: 1084KDVPHRCSTHFDAVAQIRGEAFFFKGKYFWRLTRDRHLVSLQPAQMHRFWRGLPLHLDSV 1263
Query: 395 DAVYE-NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKT 453
DAVYE S+ VFFK +++WVFKD ++ GYP + +P GID+A W +T
Sbjct: 1264DAVYERTSDHKIVFFKGDRYWVFKDNNVEEGYPRPVSDF--SLPPGGIDAAFSWAHNDRT 1437
Query: 454 YFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNST 513
YFFK YWRY + R MDPGYP +W+G+P + A + +F ++
Sbjct: 1438YFFKDQLYWRYDDHTRHMDPGYPAQSPLWRGVPSTLDDAMRWSDGASYFFRGQEYWKVLD 1617
Query: 514 KMLRVEPGYPRSILKDFMGC 533
L V PGYP+S +D++ C
Sbjct: 1618GELEVAPGYPQSTARDWLVC 1677
>ref|NM_002424.1| Homo sapiens matrix metalloproteinase 8 (neutrophil collagenase)
(MMP8), mRNA
Length = 2223
Score = 292 bits (748), Expect = 6e-77
Identities = 170/467 (36%), Positives = 245/467 (52%), Gaps = 6/467 (1%)
Frame = +3
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+K+ LP + + + + MQ+F+G+N+TGK + T+D MKKPRCG
Sbjct: 168 VQDYLEKFYQLPSNQYQSTRKNGTNVIVEKLKEMQRFFGLNVTGKPNEETLDMMKKPRCG 347
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
VPD + LT KW+ ++ Y I+N TP++ +AE +AI+ AF++W
Sbjct: 348 VPDSGG-----------FMLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWS 494
Query: 161 NVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
+PL F + + + DI I F HGD+SPFDG G LAHA+ PG GIGGD
Sbjct: 495 VASPLIFTRI-------SQGEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDA 653
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD++E WT + N++ LFLVA HE GH+LGL HS+DP A+M P Y + ET N+ LP
Sbjct: 654 HFDAEETWTNTSANYN---LFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQ 824
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ IYG I P +
Sbjct: 825 DDIDGIQAIYGLSS---------------NPIQPTG----------------------PS 893
Query: 341 KPNICDGN--FNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVY 398
P CD + F+ + LR E+ FKD++FWR R+ ++ I+ FW LP I A Y
Sbjct: 894 TPKPCDPSLTFDAITTLRGEILFFKDRYFWR-RHPQLQRVEMNFISLFWPSLPTGIQAAY 1070
Query: 399 ENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFK 457
E+ + + +F FK N++W + GYP D+ G ID+A+++ KTYFF
Sbjct: 1071EDFDRDLIFLFKGNQYWALSGYDILQGYPKDISNYGFPSSVQAIDAAVFYR--SKTYFFV 1244
Query: 458 GDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYF 503
D++WRY + + M+PGYPK I+ + GI ES A +E+ F F
Sbjct: 1245NDQFWRYDNQRQFMEPGYPKSISGAFPGI-ESKVDAVFQQEHFFHVF 1382
>gb|J05556.1|HUMCLGNA Homo sapiens collagenase mRNA, complete cds
Length = 2223
Score = 292 bits (748), Expect = 6e-77
Identities = 170/467 (36%), Positives = 245/467 (52%), Gaps = 6/467 (1%)
Frame = +3
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+K+ LP + + + + MQ+F+G+N+TGK + T+D MKKPRCG
Sbjct: 168 VQDYLEKFYQLPSNQYQSTRKNGTNVIVEKLKEMQRFFGLNVTGKPNEETLDMMKKPRCG 347
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
VPD + LT KW+ ++ Y I+N TP++ +AE +AI+ AF++W
Sbjct: 348 VPDSGG-----------FMLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWS 494
Query: 161 NVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
+PL F + + + DI I F HGD+SPFDG G LAHA+ PG GIGGD
Sbjct: 495 VASPLIFTRI-------SQGEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDA 653
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD++E WT + N++ LFLVA HE GH+LGL HS+DP A+M P Y + ET N+ LP
Sbjct: 654 HFDAEETWTNTSANYN---LFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQ 824
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ IYG I P +
Sbjct: 825 DDIDGIQAIYGLSS---------------NPIQPTG----------------------PS 893
Query: 341 KPNICDGN--FNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVY 398
P CD + F+ + LR E+ FKD++FWR R+ ++ I+ FW LP I A Y
Sbjct: 894 TPKPCDPSLTFDAITTLRGEILFFKDRYFWR-RHPQLQRVEMNFISLFWPSLPTGIQAAY 1070
Query: 399 ENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFK 457
E+ + + +F FK N++W + GYP D+ G ID+A+++ KTYFF
Sbjct: 1071EDFDRDLIFLFKGNQYWALSGYDILQGYPKDISNYGFPSSVQAIDAAVFYR--SKTYFFV 1244
Query: 458 GDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYF 503
D++WRY + + M+PGYPK I+ + GI ES A +E+ F F
Sbjct: 1245NDQFWRYDNQRQFMEPGYPKSISGAFPGI-ESKVDAVFQQEHFFHVF 1382
>gb|U88652.1|OCU88652 Oryctolagus cuniculus macrophage metalloelastase MMP-12 precursor,
mRNA, complete cds
Length = 1792
Score = 288 bits (738), Expect = 8e-76
Identities = 176/470 (37%), Positives = 244/470 (51%), Gaps = 8/470 (1%)
Frame = +1
Query: 19 RVLFLQTCVWILC--ATVCKAEQYFNVEVWLQK-YGYLPPTDPRMSVLRSAETMQSAIAA 75
+ L L +W+ A K E +L+ YG P + + ++ +
Sbjct: 34 KFLLLILTLWVTSSGADPLKENDMLFAENYLENFYGLKVERIPMTKMKTNRNFIEEKVQE 213
Query: 76 MQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQK-WQHKHIAY 134
MQQF G+N+TG++D +T++ M KPRCGVPD + + G+ W+ +I Y
Sbjct: 214 MQQFLGLNVTGQLDTSTLEMMHKPRCGVPDVYHFKT----------MPGRPVWRKHYITY 363
Query: 135 SIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHG 194
IKN TP + + AI++AF VW +VTPL F ++ GK DI I+FASG HG
Sbjct: 364 RIKNYTPDMKREDVEYAIQKAFQVWSDVTPLKFRKIT-----TGK--ADIMILFASGAHG 522
Query: 195 DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGL 254
D FDG GG +AHA+ PGPGIGGDTHFD DE W+ ++ G +LFLVAVHELGHALGL
Sbjct: 523 DYGAFDGRGGVIAHAFGPGPGIGGDTHFDEDEIWS---KSYKGTNLFLVAVHELGHALGL 693
Query: 255 EHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPP 314
+HSNDP AIM P Y Y++ + F L DD++GIQ +YG H+ +P
Sbjct: 694 DHSNDPKAIMFPTYGYIDLNTFHLSADDIRGIQSLYG-------------GPEQHQPMPK 834
Query: 315 AXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGN--FNTLVILRREMFVFKDQWF-WRVR 371
+P CD N F+ + + ++F FKD +F W++
Sbjct: 835 P----------------------DNPEPTACDHNLKFDAVTTVGNKIFFFKDSFFWWKIP 948
Query: 372 NNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLI 430
+ I+ W LP I+A YE + + VF FK +KFW+ LQP YP +
Sbjct: 949 KSSTTS--VRLISSLWPTLPSGIEAAYEIGDRHQVFLFKGDKFWLISHLRLQPNYPKSIH 1122
Query: 431 TLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT 480
+LG ID+A++ + KTYFF + YWRY E MD GYPK IT
Sbjct: 1123SLGFPDFVKKIDAAVFNPSLRKTYFFVDNLYWRYDERREVMDAGYPKLIT 1272
Score = 36.6 bits (83), Expect = 7.4
Identities = 20/44 (45%), Positives = 26/44 (58%), Gaps = 2/44 (4%)
Frame = +1
Query: 357 REMFVFKDQWFWRVRNNR-VMD-GYPMQITYFWRGLPPSIDAVY 398
R+ + F D +WR R VMD GYP IT + G+ P IDAV+
Sbjct: 1183 RKTYFFVDNLYWRYDERREVMDAGYPKLITKHFPGIGPKIDAVF 1314
>dbj|AB006779.1|AB006779 Oryctolagus cuniculus mRNA for matrix metalloproteinase-12,
complete cds
Length = 1746
Score = 288 bits (737), Expect = 1e-75
Identities = 175/470 (37%), Positives = 243/470 (51%), Gaps = 8/470 (1%)
Frame = +1
Query: 19 RVLFLQTCVWILC--ATVCKAEQYFNVEVWLQK-YGYLPPTDPRMSVLRSAETMQSAIAA 75
+ L L +W+ A K E +L+ YG P + + ++ +
Sbjct: 19 KFLLLILTLWVTSSGADPLKENDMLFAENYLENFYGLKVERIPMTKMKTNRNFIEEKVQE 198
Query: 76 MQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQK-WQHKHIAY 134
MQQF G+N+TG++D +T++ M KPRCGVPD + + G+ W+ +I Y
Sbjct: 199 MQQFLGLNVTGQLDTSTLEMMHKPRCGVPDVYHFKT----------MPGRPVWRKHYITY 348
Query: 135 SIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHG 194
IKN TP + + AI++AF VW +VTPL F ++ E DI I+FASG HG
Sbjct: 349 RIKNYTPDMKREDVEYAIQKAFQVWSDVTPLKFRKITTGE-------ADIMILFASGAHG 507
Query: 195 DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGL 254
D FDG GG +AHA+ PGPGIGGDTHFD DE W+ ++ G +LFLVAVHELGHALGL
Sbjct: 508 DYGAFDGRGGVIAHAFGPGPGIGGDTHFDEDEIWS---KSYKGTNLFLVAVHELGHALGL 678
Query: 255 EHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPP 314
+HSNDP AIM P Y Y++ + F L DD++GIQ +YG H+ +P
Sbjct: 679 DHSNDPKAIMFPTYGYIDLNTFHLSADDIRGIQSLYG-------------GPEQHQPMPK 819
Query: 315 AXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGN--FNTLVILRREMFVFKDQWF-WRVR 371
+P CD N F+ + + ++F FKD +F W++
Sbjct: 820 P----------------------DNPEPTACDHNLKFDAVTTVGNKIFFFKDSFFWWKIP 933
Query: 372 NNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLI 430
+ I+ W LP I+A YE + + VF FK +KFW+ LQP YP +
Sbjct: 934 KSSTTS--VRLISSLWPTLPSGIEAAYEIGDRHQVFLFKGDKFWLISHLRLQPNYPKSIH 1107
Query: 431 TLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT 480
+LG ID+A++ + KTYFF + YWRY E MD GYPK IT
Sbjct: 1108SLGFPDFVKKIDAAVFNPSLRKTYFFVDNLYWRYDERREVMDAGYPKLIT 1257
Score = 36.6 bits (83), Expect = 7.4
Identities = 20/44 (45%), Positives = 26/44 (58%), Gaps = 2/44 (4%)
Frame = +1
Query: 357 REMFVFKDQWFWRVRNNR-VMD-GYPMQITYFWRGLPPSIDAVY 398
R+ + F D +WR R VMD GYP IT + G+ P IDAV+
Sbjct: 1168 RKTYFFVDNLYWRYDERREVMDAGYPKLITKHFPGIGPKIDAVF 1299
>gb|AF144758.1|AF144758 Bos taurus MT1-MMP protein (MMP-14) mRNA, partial cds
Length = 784
Score = 287 bits (734), Expect = 2e-75
Identities = 145/280 (51%), Positives = 179/280 (63%), Gaps = 4/280 (1%)
Frame = +2
Query: 112 KFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVP 171
K N+RRKRYA+ G KWQH I + I+N TPKVG+ T +AIR+AF VW++ TPL F EVP
Sbjct: 38 KANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATFEAIRKAFRVWESATPLRFREVP 217
Query: 172 YIELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTL 230
Y + G ++ DI I FA GFHGD + FDGEGGFLA AYFPGP + G
Sbjct: 218 YAYIREGHEKQADILIFFAEGFHGDITAFDGEGGFLALAYFPGPNLEG------------ 361
Query: 231 GNPNHD---GNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQ 287
G+P ++ GND+FLVAVHELGHALGLEHSNDP+AIMAPFYQ+M+T+NF LP+DD +GIQ
Sbjct: 362 GHPKNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTENFVLPDDDRRGIQ 541
Query: 288 KIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDG 347
++YG S+P P PNICDG
Sbjct: 542 QLYGSKSGSPTKMPPQPRTTSRPSVP-------------------DKPKNPTYGPNICDG 664
Query: 348 NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFW 387
NF+T+ +LR EM VFK++WFWRVR N+VMDGYPM I +W
Sbjct: 665 NFDTVAMLRGEMLVFKERWFWRVRKNQVMDGYPMPIGQYW 784
>ref|NM_008611.1| Mus musculus matrix metalloproteinase 8 (Mmp8), mRNA
Length = 1961
Score = 284 bits (727), Expect = 2e-74
Identities = 172/441 (39%), Positives = 229/441 (51%), Gaps = 5/441 (1%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+K+ LP R S R+A + + MQ+F+ + TGK+D T+ M+ PRCGV
Sbjct: 179 ENYLRKFYNLPSNQFRSS--RNATMVAEKLKEMQRFFSLAETGKLDAATMGIMEMPRCGV 352
Query: 104 PDQTRGSSKFNIRRKRYALT--GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQN 161
PD + LT KW H ++ Y I N TP++ AE + AI +AF VW
Sbjct: 353 PDSGD-----------FLLTPGSPKWTHTNLTYWIINHTPQLSRAEVKTAIEKAFHVWSV 499
Query: 162 VTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTH 221
+PLTF E+ + + DI I F S HGD+SPFDG G LAHA+ PG GIGGD H
Sbjct: 500 ASPLTFTEIL-------QGEADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAH 658
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FDS+E WT + N+ +LFLVA HE GH+LGL HS DP A+M P Y Y E + LP D
Sbjct: 659 FDSEETWTQDSKNY---NLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQD 829
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK 341
D+ GIQ IYG I P +
Sbjct: 830 DINGIQTIYG---------------PSDNPIQPTG----------------------PST 898
Query: 342 PNICDGN--FNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
P CD + F+ LR E++ FK+++FWR R+ ++ I+ FW GLP + A YE
Sbjct: 899 PKACDPHLRFDATTTLRGEIYFFKEKYFWR-RHPQLRTVDLNFISLFWPGLPNGLQAAYE 1075
Query: 400 NSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
+ + + VF FK ++W LQ GYP D+ G ID+A+ + GKTYFF
Sbjct: 1076DFDRDLVFLFKGRQYWALSGYDLQQGYPRDISNYGFPRSVQAIDAAVSYN--GKTYFFIN 1249
Query: 459 DRYWRYGEEMRSMDPGYPKPI 479
++ WRY E RSMDPGYPK I
Sbjct: 1250NQCWRYDNERRSMDPGYPKSI 1312
>gb|U96696.1|MMU96696 Mus musculus neutrophil collagenase MNC mRNA, complete cds
Length = 1961
Score = 284 bits (727), Expect = 2e-74
Identities = 172/441 (39%), Positives = 229/441 (51%), Gaps = 5/441 (1%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+K+ LP R S R+A + + MQ+F+ + TGK+D T+ M+ PRCGV
Sbjct: 179 ENYLRKFYNLPSNQFRSS--RNATMVAEKLKEMQRFFSLAETGKLDAATMGIMEMPRCGV 352
Query: 104 PDQTRGSSKFNIRRKRYALT--GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQN 161
PD + LT KW H ++ Y I N TP++ AE + AI +AF VW
Sbjct: 353 PDSGD-----------FLLTPGSPKWTHTNLTYWIINHTPQLSRAEVKTAIEKAFHVWSV 499
Query: 162 VTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTH 221
+PLTF E+ + + DI I F S HGD+SPFDG G LAHA+ PG GIGGD H
Sbjct: 500 ASPLTFTEIL-------QGEADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAH 658
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FDS+E WT + N+ +LFLVA HE GH+LGL HS DP A+M P Y Y E + LP D
Sbjct: 659 FDSEETWTQDSKNY---NLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQD 829
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK 341
D+ GIQ IYG I P +
Sbjct: 830 DINGIQTIYG---------------PSDNPIQPTG----------------------PST 898
Query: 342 PNICDGN--FNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
P CD + F+ LR E++ FK+++FWR R+ ++ I+ FW GLP + A YE
Sbjct: 899 PKACDPHLRFDATTTLRGEIYFFKEKYFWR-RHPQLRTVDLNFISLFWPGLPNGLQAAYE 1075
Query: 400 NSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
+ + + VF FK ++W LQ GYP D+ G ID+A+ + GKTYFF
Sbjct: 1076DFDRDLVFLFKGRQYWALSGYDLQQGYPRDISNYGFPRSVQAIDAAVSYN--GKTYFFIN 1249
Query: 459 DRYWRYGEEMRSMDPGYPKPI 479
++ WRY E RSMDPGYPK I
Sbjct: 1250NQCWRYDNERRSMDPGYPKSI 1312
>ref|NM_079128.1| Drosophila melanogaster Matrix metalloproteinase 1 (Mmp1), mRNA
Length = 2315
Score = 282 bits (721), Expect = 8e-74
Identities = 175/497 (35%), Positives = 243/497 (48%), Gaps = 7/497 (1%)
Frame = +2
Query: 44 EVWLQKYGYLPPT--DPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
E++L ++GYLP + +P S L T SAI Q F G+N+TG++D T+ M PRC
Sbjct: 503 EIYLSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRC 682
Query: 102 GVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQN 161
GV D+ R KRYAL G +W+ K++ Y I ++ + I RAF VW
Sbjct: 683 GVRDRVGTGDS---RSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAEIGRAFAVWSE 853
Query: 162 VTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTH 221
T LTF V I I F HGD FDG+GG LAHA+FP GGD H
Sbjct: 854 DTDLTFTR-------KTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPV--FGGDAH 1006
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FD E WT+G+P G +LF VA HE GH+LGL HS+ +A+MAPFY+ E FKL D
Sbjct: 1007FDDAELWTIGSPR--GTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFE-PVFKLDED 1177
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK 341
D IQ +YG PP K
Sbjct: 1178DKAAIQSLYGRKTNQLRPTNVYPATTQRPYSPPKVPLDDSI-----------------CK 1306
Query: 342 PNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 401
+ D FN+ + E + FK ++++ + V +GYP I+ W GLP +IDA +
Sbjct: 1307DSKVDTLFNS---AQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPGNIDAAFTYK 1477
Query: 402 EGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRY 461
G FFK ++W ++ + YP ++ +GIP H +D+A+ W GK YFFKG ++
Sbjct: 1478NGKTYFFKGTQYWRYQGRQMDGVYPKEISEGFTGIPDH-LDAAMVWGGNGKIYFFKGSKF 1654
Query: 462 WRYGEEMR-SMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK-EKSTGNSTKMLRVE 519
WR+ R + YPKPI+ W+G+P + A + NG+TYF K +K V+
Sbjct: 1655WRFDPAKRPPVKASYPKPISNWEGVPNNLDAALKY-TNGYTYFFKGDKYYRFHDARFAVD 1831
Query: 520 ---PGYPRSILKDFMGC 533
P +PR + GC
Sbjct: 1832SATPPFPRPTAHWWFGC 1882
>gb|AF271666.1|AF271666 Drosophila melanogaster matrix metalloproteinase 1 mRNA, complete
cds
Length = 2315
Score = 282 bits (721), Expect = 8e-74
Identities = 175/497 (35%), Positives = 243/497 (48%), Gaps = 7/497 (1%)
Frame = +2
Query: 44 EVWLQKYGYLPPT--DPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
E++L ++GYLP + +P S L T SAI Q F G+N+TG++D T+ M PRC
Sbjct: 503 EIYLSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRC 682
Query: 102 GVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQN 161
GV D+ R KRYAL G +W+ K++ Y I ++ + I RAF VW
Sbjct: 683 GVRDRVGTGDS---RSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAEIGRAFAVWSE 853
Query: 162 VTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTH 221
T LTF V I I F HGD FDG+GG LAHA+FP GGD H
Sbjct: 854 DTDLTFTR-------KTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPV--FGGDAH 1006
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FD E WT+G+P G +LF VA HE GH+LGL HS+ +A+MAPFY+ E FKL D
Sbjct: 1007FDDAELWTIGSPR--GTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFE-PVFKLDED 1177
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK 341
D IQ +YG PP K
Sbjct: 1178DKAAIQSLYGRKTNQLRPTNVYPATTQRPYSPPKVPLDDSI-----------------CK 1306
Query: 342 PNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 401
+ D FN+ + E + FK ++++ + V +GYP I+ W GLP +IDA +
Sbjct: 1307DSKVDTLFNS---AQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPGNIDAAFTYK 1477
Query: 402 EGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRY 461
G FFK ++W ++ + YP ++ +GIP H +D+A+ W GK YFFKG ++
Sbjct: 1478NGKTYFFKGTQYWRYQGRQMDGVYPKEISEGFTGIPDH-LDAAMVWGGNGKIYFFKGSKF 1654
Query: 462 WRYGEEMR-SMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK-EKSTGNSTKMLRVE 519
WR+ R + YPKPI+ W+G+P + A + NG+TYF K +K V+
Sbjct: 1655WRFDPAKRPPVKASYPKPISNWEGVPNNLDAALKY-TNGYTYFFKGDKYYRFHDARFAVD 1831
Query: 520 ---PGYPRSILKDFMGC 533
P +PR + GC
Sbjct: 1832SATPPFPRPTAHWWFGC 1882
>ref|XM_080576.1| Matrix metalloproteinase 1, mRNA
Length = 2300
Score = 282 bits (721), Expect = 8e-74
Identities = 175/497 (35%), Positives = 243/497 (48%), Gaps = 7/497 (1%)
Frame = +2
Query: 44 EVWLQKYGYLPPT--DPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
E++L ++GYLP + +P S L T SAI Q F G+N+TG++D T+ M PRC
Sbjct: 512 EIYLSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRC 691
Query: 102 GVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQN 161
GV D+ R KRYAL G +W+ K++ Y I ++ + I RAF VW
Sbjct: 692 GVRDRVGTGDS---RSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAEIGRAFAVWSE 862
Query: 162 VTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTH 221
T LTF V I I F HGD FDG+GG LAHA+FP GGD H
Sbjct: 863 DTDLTFTR-------KTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPV--FGGDAH 1015
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FD E WT+G+P G +LF VA HE GH+LGL HS+ +A+MAPFY+ E FKL D
Sbjct: 1016FDDAELWTIGSPR--GTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFE-PVFKLDED 1186
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK 341
D IQ +YG PP K
Sbjct: 1187DKAAIQSLYGRKTNQLRPTNVYPATTQRPYSPPKVPLDDSI-----------------CK 1315
Query: 342 PNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 401
+ D FN+ + E + FK ++++ + V +GYP I+ W GLP +IDA +
Sbjct: 1316DSKVDTLFNS---AQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPGNIDAAFTYK 1486
Query: 402 EGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRY 461
G FFK ++W ++ + YP ++ +GIP H +D+A+ W GK YFFKG ++
Sbjct: 1487NGKTYFFKGTQYWRYQGRQMDGVYPKEISEGFTGIPDH-LDAAMVWGGNGKIYFFKGSKF 1663
Query: 462 WRYGEEMR-SMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK-EKSTGNSTKMLRVE 519
WR+ R + YPKPI+ W+G+P + A + NG+TYF K +K V+
Sbjct: 1664WRFDPAKRPPVKASYPKPISNWEGVPNNLDAALKY-TNGYTYFFKGDKYYRFHDARFAVD 1840
Query: 520 ---PGYPRSILKDFMGC 533
P +PR + GC
Sbjct: 1841SATPPFPRPTAHWWFGC 1891
>emb|Y13342.1|MMY13342 Mus musculus mRNA for collagenase-2
Length = 1480
Score = 282 bits (721), Expect = 8e-74
Identities = 171/441 (38%), Positives = 228/441 (50%), Gaps = 5/441 (1%)
Frame = +3
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+K+ LP R S R+A + + MQ+F+ + TGK+D T+ M+ PRCGV
Sbjct: 111 ENYLRKFYNLPSNQFRSS--RNATMVAEKLKEMQRFFSLAETGKLDAATMGIMEMPRCGV 284
Query: 104 PDQTRGSSKFNIRRKRYALT--GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQN 161
PD + LT KW H ++ Y I N TP++ AE + AI +AF VW
Sbjct: 285 PDSGD-----------FLLTPGSPKWTHTNLTYRIINHTPQLSRAEVKTAIEKAFHVWSV 431
Query: 162 VTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTH 221
+PLTF E+ + + DI I F S HGD+SPFDG G LAHA+ PG GIGGD H
Sbjct: 432 ASPLTFTEIL-------QGEADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAH 590
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FDS+E WT + N+ +LFLVA HE GH+LGL HS DP A+M P Y Y E + LP D
Sbjct: 591 FDSEETWTQDSKNY---NLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQD 761
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK 341
D+ GIQ IYG I P +
Sbjct: 762 DINGIQTIYG---------------PSDNPIQPTG----------------------PST 830
Query: 342 PNICDGN--FNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
P CD + F+ LR E++ FKD++FWR R+ ++ I+ FW LP + A YE
Sbjct: 831 PKACDPHLRFDATTTLRGEIYFFKDKYFWR-RHPQLRTVDLNFISLFWPFLPNGLQAAYE 1007
Query: 400 NSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
+ + + VF FK ++W LQ GYP D+ G ID+A+ + GKTYFF
Sbjct: 1008DFDRDLVFLFKGRQYWALSGYDLQQGYPRDISNYGFPRSVQAIDAAVSYN--GKTYFFIN 1181
Query: 459 DRYWRYGEEMRSMDPGYPKPI 479
++ WRY + RSMDPGYPK I
Sbjct: 1182NQCWRYDNQRRSMDPGYPKSI 1244
>dbj|AK020292.1|AK020292 Mus musculus adult male cecum cDNA, RIKEN full-length enriched
library, clone:9130404C19:matrix metalloproteinase 10,
full insert sequence
Length = 1735
Score = 281 bits (720), Expect = 1e-73
Identities = 176/468 (37%), Positives = 241/468 (50%), Gaps = 5/468 (1%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L+KY + ++ + + + I MQ+F G+ MTGK+D NT++ M KPRCGVPD
Sbjct: 162 YLEKYYNFKKNEKQIFKRKDSSPVVKKIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPD 341
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
G S F KW+ HI Y I N TP + AI +A VW+ VTPL
Sbjct: 342 -VGGFSTFP--------GSPKWRKSHITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPL 494
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
TF + + + DI I FA G HGD PFDG G LAHAY PGPG GD HFD D
Sbjct: 495 TFSRI-------SEGEADIMISFAVGEHGDFYPFDGPGQSLAHAYPPGPGFYGDVHFDDD 653
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD-NFKLPNDDLQ 284
E WTL G +LFLVA HELGH+LGL HS+ ++M P Y++ + NF L DD++
Sbjct: 654 EKWTLA---PSGTNLFLVAAHELGHSLGLFHSDKKESLMYPVYRFSTSPANFHLSQDDIE 824
Query: 285 GIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNI 344
GIQ +YG S+ P P+
Sbjct: 825 GIQSLYGAGPSSDATVVPVL------SVSPRPET-----------------------PDK 917
Query: 345 CDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE-NS 401
CD +F+++ LR E+ FKD++FWR R++ + I+ FW LP +DA YE ++
Sbjct: 918 CDPALSFDSVSTLRGEVLFFKDRYFWR-RSHWNPEPEFHLISAFWPTLPSDLDAAYEAHN 1094
Query: 402 EGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRY 461
+ + FK ++FW + +Q GYP + TLG ID+A++ ++ KTYFF GD+Y
Sbjct: 1095TDSVLIFKGSQFWAVRGNEVQAGYPKGIHTLGFPPTVKKIDAAVFEKEKKKTYFFVGDKY 1274
Query: 462 WRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKEKS 508
WR+ E MD G+P+ IT + GI PQ V E GF YF + S
Sbjct: 1275WRFDETRHVMDKGFPRQITDDFPGI--EPQVDAVLHEFGFFYFFRGSS 1412
>ref|NM_019471.1| Mus musculus matrix metalloproteinase 10 (Mmp10), mRNA
Length = 1744
Score = 281 bits (720), Expect = 1e-73
Identities = 176/468 (37%), Positives = 241/468 (50%), Gaps = 5/468 (1%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L+KY + ++ + + + I MQ+F G+ MTGK+D NT++ M KPRCGVPD
Sbjct: 150 YLEKYYNFKKNEKQIFKRKDSSPVVKKIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPD 329
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
G S F KW+ HI Y I N TP + AI +A VW+ VTPL
Sbjct: 330 -VGGFSTFP--------GSPKWRKSHITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPL 482
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
TF + + + DI I FA G HGD PFDG G LAHAY PGPG GD HFD D
Sbjct: 483 TFSRI-------SEGEADIMISFAVGEHGDFYPFDGPGQSLAHAYPPGPGFYGDVHFDDD 641
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD-NFKLPNDDLQ 284
E WTL G +LFLVA HELGH+LGL HS+ ++M P Y++ + NF L DD++
Sbjct: 642 EKWTLA---PSGTNLFLVAAHELGHSLGLFHSDKKESLMYPVYRFSTSPANFHLSQDDIE 812
Query: 285 GIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNI 344
GIQ +YG S+ P P+
Sbjct: 813 GIQSLYGAGPSSDATVVPVL------SVSPRPET-----------------------PDK 905
Query: 345 CDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE-NS 401
CD +F+++ LR E+ FKD++FWR R++ + I+ FW LP +DA YE ++
Sbjct: 906 CDPALSFDSVSTLRGEVLFFKDRYFWR-RSHWNPEPEFHLISAFWPTLPSDLDAAYEAHN 1082
Query: 402 EGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRY 461
+ + FK ++FW + +Q GYP + TLG ID+A++ ++ KTYFF GD+Y
Sbjct: 1083TDSVLIFKGSQFWAVRGNEVQAGYPKGIHTLGFPPTVKKIDAAVFEKEKKKTYFFVGDKY 1262
Query: 462 WRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKEKS 508
WR+ E MD G+P+ IT + GI PQ V E GF YF + S
Sbjct: 1263WRFDETRHVMDKGFPRQITDDFPGI--EPQVDAVLHEFGFFYFFRGSS 1400
>emb|Y13185.1|MMMMP10 Mus musculus mRNA for stromelysin-2
Length = 1744
Score = 281 bits (720), Expect = 1e-73
Identities = 176/468 (37%), Positives = 241/468 (50%), Gaps = 5/468 (1%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L+KY + ++ + + + I MQ+F G+ MTGK+D NT++ M KPRCGVPD
Sbjct: 150 YLEKYYNFKKNEKQIFKRKDSSPVVKKIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPD 329
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
G S F KW+ HI Y I N TP + AI +A VW+ VTPL
Sbjct: 330 -VGGFSTFP--------GSPKWRKSHITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPL 482
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
TF + + + DI I FA G HGD PFDG G LAHAY PGPG GD HFD D
Sbjct: 483 TFSRI-------SEGEADIMISFAVGEHGDFYPFDGPGQSLAHAYPPGPGFYGDVHFDDD 641
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD-NFKLPNDDLQ 284
E WTL G +LFLVA HELGH+LGL HS+ ++M P Y++ + NF L DD++
Sbjct: 642 EKWTLA---PSGTNLFLVAAHELGHSLGLFHSDKKESLMYPVYRFSTSPANFHLSQDDIE 812
Query: 285 GIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNI 344
GIQ +YG S+ P P+
Sbjct: 813 GIQSLYGAGPSSDATVVPVL------SVSPRPET-----------------------PDK 905
Query: 345 CDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE-NS 401
CD +F+++ LR E+ FKD++FWR R++ + I+ FW LP +DA YE ++
Sbjct: 906 CDPALSFDSVSTLRGEVLFFKDRYFWR-RSHWNPEPEFHLISAFWPTLPSDLDAAYEAHN 1082
Query: 402 EGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRY 461
+ + FK ++FW + +Q GYP + TLG ID+A++ ++ KTYFF GD+Y
Sbjct: 1083TDSVLIFKGSQFWAVRGNEVQAGYPKGIHTLGFPPTVKKIDAAVFEKEKKKTYFFVGDKY 1262
Query: 462 WRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKEKS 508
WR+ E MD G+P+ IT + GI PQ V E GF YF + S
Sbjct: 1263WRFDETRHVMDKGFPRQITDDFPGI--EPQVDAVLHEFGFFYFFRGSS 1400
>dbj|D82053.1|D82053 Cynops pyrrhogaster mRNA for stromelysin-1/2-a, complete cds
Length = 1755
Score = 281 bits (720), Expect = 1e-73
Identities = 174/476 (36%), Positives = 235/476 (48%), Gaps = 4/476 (0%)
Frame = +1
Query: 32 ATVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRN 91
AT + E E +L+K+ Y D + + MQ F+G+ +TGK+D N
Sbjct: 103 ATEDRGENEQLAEEYLKKF-YNLNEDGTPITRKKHSPFSEKLQEMQAFFGLEVTGKLDSN 279
Query: 92 TIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKA 151
T++ M KPRCGV D S F R W+ + Y I TP + +A+ A
Sbjct: 280 TLEMMHKPRCGVADVAE-YSHFGGR--------PTWRTTSLTYRILGYTPDMAEADVDTA 432
Query: 152 IRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYF 211
IRRAF VW +VTPLTF + + DI I F +G HGD PFDG G LAHA+
Sbjct: 433 IRRAFKVWSDVTPLTFSRIY-------EGTADIQISFGAGVHGDFYPFDGPHGTLAHAFA 591
Query: 212 PGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYM 271
PG IGGD HFD DE WT G+ G +LFLVA HE GH+LGL HS D +A+M P Y Y+
Sbjct: 592 PGNSIGGDAHFDEDETWTAGSA---GYNLFLVAAHEFGHSLGLSHSGDRSALMYPTYSYI 762
Query: 272 ETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXX 331
+ F+LP DD+ GIQ +YG S P
Sbjct: 763 DPARFRLPQDDVDGIQALYGA------------------SPNPVPTTPQATTPTTTVSTT 888
Query: 332 XXXXSYPGAKPNICDGN--FNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRG 389
S P P+ICD F+ + LR E+ FKD FWR R + + Y I+ W
Sbjct: 889 TTTTSSP-INPSICDPTLVFDAITTLRGEILFFKDSSFWR-RVPTIKEVYNYPISTSWPS 1062
Query: 390 LPPSIDAVYENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWE 448
LP I A YEN E + +F FK +K+W + + P YP ++ LG I++A++ +
Sbjct: 1063LPSGIQAAYENPETDQIFLFKGSKYWALQGFDILPNYPKNIDKLGFPRTVKHINAAVYLQ 1242
Query: 449 DVGKTYFFKGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYF 503
KTYFF G++YW Y E ++MD P+ I + GI + F ++NG YF
Sbjct: 1243STQKTYFFAGEQYWSYDEARKTMDKESPRRIEDDFPGIGKKVHAVF--EDNGLLYF 1404
>gb|AF034087.1|AF034087 Equus caballus matrix metalloproteinase 13 (MMP13) mRNA, complete
cds
Length = 2727
Score = 281 bits (719), Expect = 1e-73
Identities = 180/496 (36%), Positives = 253/496 (50%), Gaps = 13/496 (2%)
Frame = +2
Query: 38 EQYFNVEVWLQKYGYLPPTDPRMSVLRSA-ETMQSAIAAMQQFYGINMTGKVDRNTIDWM 96
E + E +L+ Y Y P +P + ++A ++ + MQ F+G+ +TGK+D NT+D M
Sbjct: 122 EDFQLAERYLKSYYY--PLNPAGILKKTAANSVVDRLREMQSFFGLEVTGKLDDNTLDIM 295
Query: 97 KKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAF 156
KKPRCGVPD ++N+ + KW ++ Y I N TP + +E KA ++AF
Sbjct: 296 KKPRCGVPDV----GEYNVFPRTL-----KWPKMNLTYRIVNYTPDLTHSEVEKAFKKAF 448
Query: 157 DVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGI 216
VW +VTPL F L NG DI I F + HGD PFDG G LAHA+ PGP
Sbjct: 449 KVWSDVTPLNFTR-----LYNGT--ADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNY 607
Query: 217 GGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNF 276
GGD HFD DE WT + G +LFLVA HE GH+LGL+HS DP A+M P Y Y +F
Sbjct: 608 GGDAHFDDDETWTSSSK---GYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHF 778
Query: 277 KLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXS 336
LP+DD+QGIQ +YG
Sbjct: 779 VLPDDDVQGIQYLYGPGDED---------------------------------------- 838
Query: 337 YPGAK----PNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGL 390
P K P+ CD + + + LR E VFKD++FWR+ + +++D FW L
Sbjct: 839 -PNPKHPKTPDKCDPSLSLDAITSLRGETMVFKDRFFWRL-HPQLVDAELFLTKSFWPEL 1012
Query: 391 PPSIDAVYENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWED 449
P IDA YE+ + +F F+ KFW + GYP + LG I +A+ +ED
Sbjct: 1013PNRIDAAYEHPSKDLIFIFRGRKFWALNGYDILEGYPQKISELGFPKDVKKISAAVHFED 1192
Query: 450 VGKTYFFKGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYF----I 504
GKT FF G++ WRY + R MD YP+ I + GI + V+++NG+ YF I
Sbjct: 1193TGKTLFFSGNQVWRYDDTNRMMDKDYPRLIEEDFPGIGDKVDA--VYEKNGYIYFFNGPI 1366
Query: 505 KEKSTGNSTKMLRVEP 520
+ + + S +++RV P
Sbjct: 1367QFEYSIWSNRIVRVMP 1414
>ref|NM_022221.1| Rattus norvegicus neutrophil collagenease (LOC63849), mRNA
Length = 1401
Score = 280 bits (715), Expect = 4e-73
Identities = 172/448 (38%), Positives = 233/448 (51%), Gaps = 6/448 (1%)
Frame = +1
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+K+ +LP R + R+A + + MQ+F+G+ TGK D TI+ M+KPRCGV
Sbjct: 109 ENYLRKFYHLPSNQFRSA--RNATMIAEKLKEMQRFFGLPETGKPDAATIEIMEKPRCGV 282
Query: 104 PDQTRGSSKFNIRRKRYALT--GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQN 161
PD + LT KW H ++ Y I N TP++ AE + I +AF +W
Sbjct: 283 PDSGD-----------FLLTPGSPKWTHTNLTYRIINHTPQMSKAEVKTEIEKAFKIWSV 429
Query: 162 VTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTH 221
+ LTF E LE + DI I F S HGD+SPFDG G LAHA+ PG GIGGD H
Sbjct: 430 PSTLTFTET----LEG---EADINIAFVSRDHGDNSPFDGPNGILAHAFQPGRGIGGDAH 588
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FDS+E WT + N+ +LFLVA HE GH+LGL HS DP A+M P Y Y E + LP D
Sbjct: 589 FDSEETWTQDSKNY---NLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQD 759
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK 341
D+ GIQ IYG + P +
Sbjct: 760 DINGIQTIYG---------------PSDNPVQPTG----------------------PST 828
Query: 342 PNICDGN--FNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
P CD + F+ LR E++ FKD++FWR R+ ++ I+ FW LP + A YE
Sbjct: 829 PTACDPHLRFDAATTLRGEIYFFKDKYFWR-RHPQLRTVDLNFISLFWPFLPNGLQAAYE 1005
Query: 400 NSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
+ + + VF FK ++W LQ GYP D+ G ID+A+ + GKTYFF
Sbjct: 1006DFDRDLVFLFKGRQYWALSAYDLQQGYPRDISNYGFPRSVQAIDAAVSYN--GKTYFFVN 1179
Query: 459 DRYWRYGEEMRSMDPGYPKPI-TIWKGI 485
++ WRY + RSMDPGYP I +++ GI
Sbjct: 1180NQCWRYDNQRRSMDPGYPTSIASVFPGI 1263
>emb|AJ007288.1|RNO7288 Rattus norvegicus mRNA for neutrophil collagenease
Length = 1401
Score = 280 bits (715), Expect = 4e-73
Identities = 172/448 (38%), Positives = 233/448 (51%), Gaps = 6/448 (1%)
Frame = +1
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+K+ +LP R + R+A + + MQ+F+G+ TGK D TI+ M+KPRCGV
Sbjct: 109 ENYLRKFYHLPSNQFRSA--RNATMIAEKLKEMQRFFGLPETGKPDAATIEIMEKPRCGV 282
Query: 104 PDQTRGSSKFNIRRKRYALT--GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQN 161
PD + LT KW H ++ Y I N TP++ AE + I +AF +W
Sbjct: 283 PDSGD-----------FLLTPGSPKWTHTNLTYRIINHTPQMSKAEVKTEIEKAFKIWSV 429
Query: 162 VTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTH 221
+ LTF E LE + DI I F S HGD+SPFDG G LAHA+ PG GIGGD H
Sbjct: 430 PSTLTFTET----LEG---EADINIAFVSRDHGDNSPFDGPNGILAHAFQPGRGIGGDAH 588
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FDS+E WT + N+ +LFLVA HE GH+LGL HS DP A+M P Y Y E + LP D
Sbjct: 589 FDSEETWTQDSKNY---NLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQD 759
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK 341
D+ GIQ IYG + P +
Sbjct: 760 DINGIQTIYG---------------PSDNPVQPTG----------------------PST 828
Query: 342 PNICDGN--FNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
P CD + F+ LR E++ FKD++FWR R+ ++ I+ FW LP + A YE
Sbjct: 829 PTACDPHLRFDAATTLRGEIYFFKDKYFWR-RHPQLRTVDLNFISLFWPFLPNGLQAAYE 1005
Query: 400 NSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
+ + + VF FK ++W LQ GYP D+ G ID+A+ + GKTYFF
Sbjct: 1006DFDRDLVFLFKGRQYWALSAYDLQQGYPRDISNYGFPRSVQAIDAAVSYN--GKTYFFVN 1179
Query: 459 DRYWRYGEEMRSMDPGYPKPI-TIWKGI 485
++ WRY + RSMDPGYP I +++ GI
Sbjct: 1180NQCWRYDNQRRSMDPGYPTSIASVFPGI 1263
>ref|NM_002426.1| Homo sapiens matrix metalloproteinase 12 (macrophage elastase)
(MMP12), mRNA
Length = 1778
Score = 279 bits (713), Expect = 7e-73
Identities = 167/465 (35%), Positives = 240/465 (50%), Gaps = 5/465 (1%)
Frame = +1
Query: 44 EVWLQK-YGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
E +L+K YG P + S M+ I MQ F G+ +TG++D +T++ M PRCG
Sbjct: 112 ERYLEKFYGLEINKLPVTKMKYSGNLMKEKIQEMQHFLGLKVTGQLDTSTLEMMHAPRCG 291
Query: 103 VPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNV 162
VPD + R G W+ +I Y I N TP + + AIR+AF VW NV
Sbjct: 292 VPD---------LHHFREMPGGPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNV 444
Query: 163 TPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPL F ++ DI ++FA G HGD FDG+GG LAHA+ PG GIGGD HF
Sbjct: 445 TPLKFSKI-------NTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHF 603
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDD 282
D DE WT + G +LFL AVHE+GH+LGL HS+DP A+M P Y+Y++ + F+L DD
Sbjct: 604 DEDEFWTT---HSGGTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADD 774
Query: 283 LQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKP 342
++GIQ +YG ++ +P + ++P
Sbjct: 775 IRGIQSLYG-------------DPKENQRLP----------------------NPDNSEP 849
Query: 343 NICDGN--FNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYEN 400
+CD N F+ + + ++F FKD++FW + R + I+ W LP I+A YE
Sbjct: 850 ALCDPNLSFDAVTTVGNKIFFFKDRFFWLKVSERPKTSVNL-ISSLWPTLPSGIEAAYEI 1026
Query: 401 SEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGD 459
N VF FK +K+W+ + +P YP + + G ID+A++ +TYFF +
Sbjct: 1027EARNQVFLFKDDKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDN 1206
Query: 460 RYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYF 503
+YWRY E + MDPGYPK IT ++GI F K + +F
Sbjct: 1207QYWRYDERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFF 1341
Score = 40.0 bits (92), Expect = 0.67
Identities = 22/57 (38%), Positives = 32/57 (55%), Gaps = 3/57 (5%)
Frame = +1
Query: 360 FVFKDQWFWRVRNNRVM--DGYPMQITYFWRGLPPSIDAVYENSEGNFVFFK-SNKF 413
+ F D +WR R M GYP IT ++G+ P IDAV+ + + FF+ SN+F
Sbjct: 1189 YFFVDNQYWRYDERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQGSNQF 1359
>gb|L23808.1|HUMHME Human metalloproteinase (HME) mRNA, complete cds
Length = 1778
Score = 279 bits (713), Expect = 7e-73
Identities = 167/465 (35%), Positives = 240/465 (50%), Gaps = 5/465 (1%)
Frame = +1
Query: 44 EVWLQK-YGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
E +L+K YG P + S M+ I MQ F G+ +TG++D +T++ M PRCG
Sbjct: 112 ERYLEKFYGLEINKLPVTKMKYSGNLMKEKIQEMQHFLGLKVTGQLDTSTLEMMHAPRCG 291
Query: 103 VPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNV 162
VPD + R G W+ +I Y I N TP + + AIR+AF VW NV
Sbjct: 292 VPD---------LHHFREMPGGPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNV 444
Query: 163 TPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPL F ++ DI ++FA G HGD FDG+GG LAHA+ PG GIGGD HF
Sbjct: 445 TPLKFSKI-------NTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHF 603
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDD 282
D DE WT + G +LFL AVHE+GH+LGL HS+DP A+M P Y+Y++ + F+L DD
Sbjct: 604 DEDEFWTT---HSGGTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADD 774
Query: 283 LQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKP 342
++GIQ +YG ++ +P + ++P
Sbjct: 775 IRGIQSLYG-------------DPKENQRLP----------------------NPDNSEP 849
Query: 343 NICDGN--FNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYEN 400
+CD N F+ + + ++F FKD++FW + R + I+ W LP I+A YE
Sbjct: 850 ALCDPNLSFDAVTTVGNKIFFFKDRFFWLKVSERPKTSVNL-ISSLWPTLPSGIEAAYEI 1026
Query: 401 SEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGD 459
N VF FK +K+W+ + +P YP + + G ID+A++ +TYFF +
Sbjct: 1027EARNQVFLFKDDKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDN 1206
Query: 460 RYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYF 503
+YWRY E + MDPGYPK IT ++GI F K + +F
Sbjct: 1207QYWRYDERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFF 1341
Score = 40.0 bits (92), Expect = 0.67
Identities = 22/57 (38%), Positives = 32/57 (55%), Gaps = 3/57 (5%)
Frame = +1
Query: 360 FVFKDQWFWRVRNNRVM--DGYPMQITYFWRGLPPSIDAVYENSEGNFVFFK-SNKF 413
+ F D +WR R M GYP IT ++G+ P IDAV+ + + FF+ SN+F
Sbjct: 1189 YFFVDNQYWRYDERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQGSNQF 1359
>emb|X05083.1|RNTRAN2R RAT mRNA for oncogene-induced transin-2
Length = 1708
Score = 278 bits (710), Expect = 1e-72
Identities = 178/477 (37%), Positives = 242/477 (50%), Gaps = 5/477 (1%)
Frame = +2
Query: 32 ATVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRN 91
+T+ A+QY L+KY + + + + + I MQ+F G+ MTGK+D N
Sbjct: 119 STMDLAQQY------LEKYYNFRKNEKQFFKRKDSSPVVKKIEEMQKFLGLEMTGKLDSN 280
Query: 92 TIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKA 151
T++ M KPRCGVPD G S F KW+ HI+Y I N T + A
Sbjct: 281 TVEMMHKPRCGVPD-VGGFSTFP--------GSPKWRKNHISYRIVNYTLDLPRESVDSA 433
Query: 152 IRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYF 211
I RA VW+ VTPLTF + + + DI I FA G HGD PFDG G LAHAY
Sbjct: 434 IERALKVWEEVTPLTFSRI-------SEGEADIMISFAVGEHGDFYPFDGVGQSLAHAYP 592
Query: 212 PGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYM 271
PGPG GD HFD DE W+LG G +LFLVA HELGH+LGL HSN+ ++M P Y++
Sbjct: 593 PGPGFYGDAHFDDDEKWSLG---PSGTNLFLVAAHELGHSLGLFHSNNKESLMYPVYRFS 763
Query: 272 ETD-NFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXX 330
+ N +L DD++GIQ +YG ++ P
Sbjct: 764 TSQANIRLSQDDIEGIQSLYGARPSSDA------------TVVPV--------------- 862
Query: 331 XXXXXSYPGAKPNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWR 388
S P CD +F+ + +LR E FKD+ FWR + + I+ FW
Sbjct: 863 --PSVSPKPETPVKCDPALSFDAVTMLRGEFLFFKDRHFWRRTQWNPEPEFHL-ISAFWP 1033
Query: 389 GLPPSIDAVYE-NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWW 447
LP +DA YE N++ + FK ++FW + +Q GYP + TLG ID+A++
Sbjct: 1034SLPSGLDAAYEANNKDRVLIFKGSQFWAVRGNEVQAGYPKRIHTLGFPPTVKKIDAAVFE 1213
Query: 448 EDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYF 503
++ KTYFF GD+YWR+ E + MD G+P+ IT + GI PQ V GF YF
Sbjct: 1214KEKKKTYFFVGDKYWRFDETRQLMDKGFPRLITDDFPGI--EPQVDAVLHAFGFFYF 1378
>gb|M65253.1|RATTAP34A Rat transformation-associated protein (34A) mRNA, complete cds
Length = 1717
Score = 278 bits (710), Expect = 1e-72
Identities = 178/477 (37%), Positives = 242/477 (50%), Gaps = 5/477 (1%)
Frame = +2
Query: 32 ATVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRN 91
+T+ A+QY L+KY + + + + + I MQ+F G+ MTGK+D N
Sbjct: 122 STMDLAQQY------LEKYYNFRKNEKQFFKRKDSSPVVKKIEEMQKFLGLEMTGKLDSN 283
Query: 92 TIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKA 151
T++ M KPRCGVPD G S F KW+ HI+Y I N T + A
Sbjct: 284 TVEMMHKPRCGVPD-VGGFSTFP--------GSPKWRKNHISYRIVNYTLDLPRESVDSA 436
Query: 152 IRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYF 211
I RA VW+ VTPLTF + + + DI I FA G HGD PFDG G LAHAY
Sbjct: 437 IERALKVWEEVTPLTFSRI-------SEGEADIMISFAVGEHGDFYPFDGVGQSLAHAYP 595
Query: 212 PGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYM 271
PGPG GD HFD DE W+LG G +LFLVA HELGH+LGL HSN+ ++M P Y++
Sbjct: 596 PGPGFYGDAHFDDDEKWSLG---PSGTNLFLVAAHELGHSLGLFHSNNKESLMYPVYRFS 766
Query: 272 ETD-NFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXX 330
+ N +L DD++GIQ +YG ++ P
Sbjct: 767 TSQANIRLSQDDIEGIQSLYGARPSSDA------------TVVPV--------------- 865
Query: 331 XXXXXSYPGAKPNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWR 388
S P CD +F+ + +LR E FKD+ FWR + + I+ FW
Sbjct: 866 --PSVSPKPETPVKCDPALSFDAVTMLRGEFLFFKDRHFWRRTQWNPEPEFHL-ISAFWP 1036
Query: 389 GLPPSIDAVYE-NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWW 447
LP +DA YE N++ + FK ++FW + +Q GYP + TLG ID+A++
Sbjct: 1037SLPSGLDAAYEANNKDRVLIFKGSQFWAVRGNEVQAGYPKRIHTLGFPPTVKKIDAAVFE 1216
Query: 448 EDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYF 503
++ KTYFF GD+YWR+ E + MD G+P+ IT + GI PQ V GF YF
Sbjct: 1217KEKKKTYFFVGDKYWRFDETRQLMDKGFPRLITDDFPGI--EPQVDAVLHAFGFFYF 1381
>gb|AF148882.1|AF148882 Equus caballus matrix metalloproteinase 1 precursor (MMP1) mRNA,
complete cds
Length = 1923
Score = 277 bits (709), Expect = 2e-72
Identities = 176/469 (37%), Positives = 237/469 (50%), Gaps = 8/469 (1%)
Frame = +2
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+ Y L ++ R + + MQ+F+G+ +TGK D T++ MK+PRCG
Sbjct: 155 VQKYLENYYNLKSDGEQIEKQRHRSPVVEKLKQMQEFFGLKVTGKPDAETLNVMKQPRCG 334
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
VPD + LT +W++ H+ Y I+N TP + A+ +AI +AF +W
Sbjct: 335 VPDVAE-----------FVLTEGNPRWENTHLTYRIENYTPDLPRADVDQAIEKAFQLWS 481
Query: 161 NVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
NV+PLTF +V + DI I F G H D+SPFDG GG LAHA+ PGP IGGD
Sbjct: 482 NVSPLTFTKV-------SEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPRIGGDA 640
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT N+ +L+ VA HE GH+LGL HS D A+M P Y T + +L
Sbjct: 641 HFDEDETWTSNFRNY---NLYRVAAHEFGHSLGLSHSTDIGALMYP--NYFFTGDVQLSQ 805
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ IYG I P
Sbjct: 806 DDINGIQAIYG---------------PSQNPIQPIGPQT--------------------- 877
Query: 341 KPNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVY 398
P +CD F+ + +R E+ FKD+++ R+ N + I+ FW LP + A Y
Sbjct: 878 -PEVCDSKLTFDAITTIRGEVMFFKDRFYMRI-NPYYPEAELNFISIFWPQLPNGLQAAY 1051
Query: 399 ENSEGNFV-FFKSNKFWVFKDTTLQPGYPHDLITLGSGIPS--HGIDSAIWWEDVGKTYF 455
E S + V FFK NK+W K + GYP D I G PS ID+A+ ED GKTYF
Sbjct: 1052EVSHRDEVRFFKGNKYWAVKGQDVLYGYPKD-IHRSFGFPSTVKNIDAAVSEEDTGKTYF 1228
Query: 456 FKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYF 503
F D+YWRY E RSMD GYPK I + GI + F +++GF YF
Sbjct: 1229FVADKYWRYDEYKRSMDAGYPKMIADDFPGIGDKVDAVF--QKDGFFYF 1369
>gb|AF201729.1|AF201729 Canis familiaris matrix metalloproteinase-13 mRNA, partial cds
Length = 1356
Score = 276 bits (706), Expect = 4e-72
Identities = 171/471 (36%), Positives = 239/471 (50%), Gaps = 5/471 (1%)
Frame = +1
Query: 38 EQYFNVEVWLQKYGYLPPTDPRMSVLRSAE-TMQSAIAAMQQFYGINMTGKVDRNTIDWM 96
E + E +L+ Y Y P +P + +SA ++ + MQ F+G+ +TGK+D NT+D M
Sbjct: 76 EDFQLAERYLKSYYY--PLNPAGILKKSAAGSVADRLREMQSFFGLEVTGKLDDNTLDIM 249
Query: 97 KKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAF 156
KKPRCGVPD ++N+ + KW ++ Y I N TP + +E KA ++AF
Sbjct: 250 KKPRCGVPDV----GEYNVFPRTL-----KWSKTNLTYRIVNYTPDLTHSEVEKAFKKAF 402
Query: 157 DVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGI 216
VW +VTPL F L +G DI I F + HGD PFDG G LAHA+ PGP
Sbjct: 403 KVWSDVTPLNFTR-----LHDGT--ADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNY 561
Query: 217 GGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNF 276
GGD HFD DE WT + G +LFLVA HE GH+LGL+HS DP A+M P Y Y +F
Sbjct: 562 GGDAHFDDDETWTSSSK---GYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHF 732
Query: 277 KLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXS 336
LP+DD+QGIQ +YG
Sbjct: 733 MLPDDDVQGIQSLYG------------------------------------PGDEDPNPR 804
Query: 337 YPGAKPNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSI 394
+P P+ CD + + + LR E +FKD++FWR+ +V D FW LP I
Sbjct: 805 HP-KTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQV-DAELFLTKSFWPELPNRI 978
Query: 395 DAVYENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKT 453
DA YE+ + +F F+ K+W + GYP + LG I +A+ +ED GKT
Sbjct: 979 DAAYEHPSRDLIFIFRGRKYWALNGYDILEGYPQKISELGFPKEVKKISAAVHFEDTGKT 1158
Query: 454 YFFKGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYF 503
FF G++ W Y + + MD YP+ I + GI + V+++NG+ YF
Sbjct: 1159LFFSGNQVWSYDDTNQIMDKDYPRLIEEDFPGIGDKVDA--VYEKNGYIYF 1305
>emb|X05232.1|HSSTROMR Human mRNA for stromelysin
Length = 1801
Score = 275 bits (703), Expect = 9e-72
Identities = 178/496 (35%), Positives = 246/496 (48%), Gaps = 16/496 (3%)
Frame = +2
Query: 29 ILCATVCKA----------EQYFN-VEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQ 77
+LC VC A + N V+ +L+ Y L + + + + I MQ
Sbjct: 68 LLCVAVCSAYPLDGAARGEDTSMNLVQKYLENYYDLKKDVKQFVRRKDSGPVVKKIREMQ 247
Query: 78 QFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIK 137
+F G+ +TGK+D +T++ M+KPRCGVPD + I KW+ H+ Y I
Sbjct: 248 KFLGLEVTGKLDSDTLEVMRKPRCGVPDVGHFRTFPGI---------PKWRKTHLTYRIV 400
Query: 138 NVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSS 197
N TP + A+ +A VW+ VTPLTF + + + DI I FA HGD
Sbjct: 401 NYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLY-------EGEADIMISFAVREHGDFY 559
Query: 198 PFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHS 257
PFDG G LAHAY PGPGI GD HFD DE WT + G +LFLVA HE+GH+LGL HS
Sbjct: 560 PFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT---KDTTGTNLFLVAAHEIGHSLGLFHS 730
Query: 258 NDPTAIMAPFYQYM-ETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAX 316
+ A+M P Y + + F+L DD+ GIQ +YG +PP
Sbjct: 731 ANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGPPPDSPETPLVPT-----EPVPPE- 892
Query: 317 XXXXXXXXXXXXXXXXXXXSYPGAKPNICDG--NFNTLVILRREMFVFKDQWFWRVRNNR 374
PG N CD +F+ + LR E+ +FKD+ FWR ++ R
Sbjct: 893 ---------------------PGTPAN-CDPALSFDAVSTLRGEILIFKDRHFWR-KSLR 1003
Query: 375 VMDGYPMQITYFWRGLPPSIDAVYENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLG 433
++ I+ FW LP +DA YE + + VF FK N+FW + ++ GYP + TLG
Sbjct: 1004KLEPELHLISSFWPSLPSGVDAAYEVTSKDLVFIFKGNQFWAIRGNEVRAGYPRGIHTLG 1183
Query: 434 SGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGA 492
ID+AI ++ KTYFF D+YWR+ E+ SM+PG+PK I + GI
Sbjct: 1184FPPTVRKIDAAISDKEKNKTYFFVEDKYWRFDEKRNSMEPGFPKQIAEDFPGIDSKIDAV 1363
Query: 493 FVHKENGFTYFIKEKS 508
F +E GF YF S
Sbjct: 1364F--EEFGFFYFFTGSS 1405
Score = 58.5 bits (140), Expect = 2e-06
Identities = 48/151 (31%), Positives = 71/151 (46%), Gaps = 5/151 (3%)
Frame = +2
Query: 393 SIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGK 452
S DAV G + FK FW L+P H + + +PS G+D+A
Sbjct: 926 SFDAV-STLRGEILIFKDRHFWRKSLRKLEPEL-HLISSFWPSLPS-GVDAAYEVTSKDL 1096
Query: 453 TYFFKGDRYWRY-GEEMRSMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYF-IKEK 507
+ FKG+++W G E+R+ GYP+ I G P + + A KE TYF +++K
Sbjct: 1097 VFIFKGNQFWAIRGNEVRA---GYPRGIHTL-GFPPTVRKIDAAISDKEKNKTYFFVEDK 1264
Query: 508 STGNSTKMLRVEPGYPRSILKDFMGCDGPTD 538
K +EPG+P+ I +DF G D D
Sbjct: 1265 YWRFDEKRNSMEPGFPKQIAEDFPGIDSKID 1357
>ref|NM_002422.2| Homo sapiens matrix metalloproteinase 3 (stromelysin 1,
progelatinase) (MMP3), mRNA
Length = 1821
Score = 275 bits (703), Expect = 9e-72
Identities = 178/496 (35%), Positives = 246/496 (48%), Gaps = 16/496 (3%)
Frame = +1
Query: 29 ILCATVCKA----------EQYFN-VEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQ 77
+LC VC A + N V+ +L+ Y L + + + + I MQ
Sbjct: 88 LLCVAVCSAYPLDGAARGEDTSMNLVQKYLENYYDLKKDVKQFVRRKDSGPVVKKIREMQ 267
Query: 78 QFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIK 137
+F G+ +TGK+D +T++ M+KPRCGVPD + I KW+ H+ Y I
Sbjct: 268 KFLGLEVTGKLDSDTLEVMRKPRCGVPDVGHFRTFPGI---------PKWRKTHLTYRIV 420
Query: 138 NVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSS 197
N TP + A+ +A VW+ VTPLTF + + + DI I FA HGD
Sbjct: 421 NYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLY-------EGEADIMISFAVREHGDFY 579
Query: 198 PFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHS 257
PFDG G LAHAY PGPGI GD HFD DE WT + G +LFLVA HE+GH+LGL HS
Sbjct: 580 PFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT---KDTTGTNLFLVAAHEIGHSLGLFHS 750
Query: 258 NDPTAIMAPFYQYM-ETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAX 316
+ A+M P Y + + F+L DD+ GIQ +YG +PP
Sbjct: 751 ANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGPPPDSPETPLVPT-----EPVPPE- 912
Query: 317 XXXXXXXXXXXXXXXXXXXSYPGAKPNICDG--NFNTLVILRREMFVFKDQWFWRVRNNR 374
PG N CD +F+ + LR E+ +FKD+ FWR ++ R
Sbjct: 913 ---------------------PGTPAN-CDPALSFDAVSTLRGEILIFKDRHFWR-KSLR 1023
Query: 375 VMDGYPMQITYFWRGLPPSIDAVYENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLG 433
++ I+ FW LP +DA YE + + VF FK N+FW + ++ GYP + TLG
Sbjct: 1024KLEPELHLISSFWPSLPSGVDAAYEVTSKDLVFIFKGNQFWAIRGNEVRAGYPRGIHTLG 1203
Query: 434 SGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGA 492
ID+AI ++ KTYFF D+YWR+ E+ SM+PG+PK I + GI
Sbjct: 1204FPPTVRKIDAAISDKEKNKTYFFVEDKYWRFDEKRNSMEPGFPKQIAEDFPGIDSKIDAV 1383
Query: 493 FVHKENGFTYFIKEKS 508
F +E GF YF S
Sbjct: 1384F--EEFGFFYFFTGSS 1425
Score = 58.5 bits (140), Expect = 2e-06
Identities = 48/151 (31%), Positives = 71/151 (46%), Gaps = 5/151 (3%)
Frame = +1
Query: 393 SIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGK 452
S DAV G + FK FW L+P H + + +PS G+D+A
Sbjct: 946 SFDAV-STLRGEILIFKDRHFWRKSLRKLEPEL-HLISSFWPSLPS-GVDAAYEVTSKDL 1116
Query: 453 TYFFKGDRYWRY-GEEMRSMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYF-IKEK 507
+ FKG+++W G E+R+ GYP+ I G P + + A KE TYF +++K
Sbjct: 1117 VFIFKGNQFWAIRGNEVRA---GYPRGIHTL-GFPPTVRKIDAAISDKEKNKTYFFVEDK 1284
Query: 508 STGNSTKMLRVEPGYPRSILKDFMGCDGPTD 538
K +EPG+P+ I +DF G D D
Sbjct: 1285 YWRFDEKRNSMEPGFPKQIAEDFPGIDSKID 1377
>gb|J03209.1|HUMMMP3A Human matrix metalloproteinase-3 (MMP-3) mRNA, complete cds
Length = 1434
Score = 275 bits (703), Expect = 9e-72
Identities = 178/496 (35%), Positives = 246/496 (48%), Gaps = 16/496 (3%)
Frame = +1
Query: 29 ILCATVCKA----------EQYFN-VEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQ 77
+LC VC A + N V+ +L+ Y L + + + + I MQ
Sbjct: 25 LLCVAVCSAYPLDGAARGEDTSMNLVQKYLENYYDLEKDVKQFVRRKDSGPVVKKIREMQ 204
Query: 78 QFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIK 137
+F G+ +TGK+D +T++ M+KPRCGVPD + I KW+ H+ Y I
Sbjct: 205 KFLGLEVTGKLDSDTLEVMRKPRCGVPDVGHFRTFPGI---------PKWRKTHLTYRIV 357
Query: 138 NVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSS 197
N TP + A+ +A VW+ VTPLTF + + + DI I FA HGD
Sbjct: 358 NYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLY-------EGEADIMISFAVREHGDFY 516
Query: 198 PFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHS 257
PFDG G LAHAY PGPGI GD HFD DE WT + G +LFLVA HE+GH+LGL HS
Sbjct: 517 PFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT---KDTTGTNLFLVAAHEIGHSLGLFHS 687
Query: 258 NDPTAIMAPFYQYM-ETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAX 316
+ A+M P Y + + F+L DD+ GIQ +YG +PP
Sbjct: 688 ANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGPPPDSPETPLVPT-----EPVPPE- 849
Query: 317 XXXXXXXXXXXXXXXXXXXSYPGAKPNICDG--NFNTLVILRREMFVFKDQWFWRVRNNR 374
PG N CD +F+ + LR E+ +FKD+ FWR ++ R
Sbjct: 850 ---------------------PGTPAN-CDPALSFDAVSTLRGEILIFKDRHFWR-KSLR 960
Query: 375 VMDGYPMQITYFWRGLPPSIDAVYENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLG 433
++ I+ FW LP +DA YE + + VF FK N+FW + ++ GYP + TLG
Sbjct: 961 KLEPELHLISSFWPSLPSGVDAAYEVTSKDLVFIFKGNQFWAIRGNEVRAGYPRGIHTLG 1140
Query: 434 SGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGA 492
ID+AI ++ KTYFF D+YWR+ E+ SM+PG+PK I + GI
Sbjct: 1141FPPTVRKIDAAISDKEKNKTYFFVEDKYWRFDEKRNSMEPGFPKQIAEDFPGIDSKIDAV 1320
Query: 493 FVHKENGFTYFIKEKS 508
F +E GF YF S
Sbjct: 1321F--EEFGFFYFFTGSS 1362
Score = 58.5 bits (140), Expect = 2e-06
Identities = 48/151 (31%), Positives = 71/151 (46%), Gaps = 5/151 (3%)
Frame = +1
Query: 393 SIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGK 452
S DAV G + FK FW L+P H + + +PS G+D+A
Sbjct: 883 SFDAV-STLRGEILIFKDRHFWRKSLRKLEPEL-HLISSFWPSLPS-GVDAAYEVTSKDL 1053
Query: 453 TYFFKGDRYWRY-GEEMRSMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYF-IKEK 507
+ FKG+++W G E+R+ GYP+ I G P + + A KE TYF +++K
Sbjct: 1054 VFIFKGNQFWAIRGNEVRA---GYPRGIHTL-GFPPTVRKIDAAISDKEKNKTYFFVEDK 1221
Query: 508 STGNSTKMLRVEPGYPRSILKDFMGCDGPTD 538
K +EPG+P+ I +DF G D D
Sbjct: 1222 YWRFDEKRNSMEPGFPKQIAEDFPGIDSKID 1314
>emb|X75308.1|HSRNAC3 H.sapiens mRNA for collagenase 3
Length = 2698
Score = 275 bits (702), Expect = 1e-71
Identities = 176/489 (35%), Positives = 243/489 (48%), Gaps = 12/489 (2%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+ Y Y P + +A +M + MQ F+G+ +TGK+D NT+D MKKPRCGV
Sbjct: 122 ERYLRSY-YHPTNLAGILKENAASSMTERLREMQSFFGLEVTGKLDDNTLDVMKKPRCGV 298
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVT 163
PD ++N+ + KW ++ Y I N TP + +E KA ++AF VW +VT
Sbjct: 299 PDV----GEYNVFPRTL-----KWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVT 451
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PL F L +G DI I F HGD PFDG G LAHA+ PGP GGD HFD
Sbjct: 452 PLNFTR-----LHDGI--ADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFD 610
Query: 224 SDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDL 283
DE WT + G +LFLVA HE GH+LGL+HS DP A+M P Y Y +F LP+DD+
Sbjct: 611 DDETWTSSSK---GYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDV 781
Query: 284 QGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK-- 341
QGIQ +YG P K
Sbjct: 782 QGIQSLYGPGDED-----------------------------------------PNPKHP 838
Query: 342 --PNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 397
P+ CD + + + LR E +FKD++FWR+ +V D FW LP IDA
Sbjct: 839 KTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQV-DAELFLTKSFWPELPNRIDAA 1015
Query: 398 YENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YE+ + +F F+ KFW + GYP + LG I +A+ +ED GKT F
Sbjct: 1016YEHPSHDLIFIFRGRKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLF 1195
Query: 457 KGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYF----IKEKSTGN 511
G++ WRY + MD YP+ I + GI + V+++NG+ YF I+ + +
Sbjct: 1196SGNQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDA--VYEKNGYIYFFNGPIQFEYSIW 1369
Query: 512 STKMLRVEP 520
S +++RV P
Sbjct: 1370SNRIVRVMP 1396
>ref|NM_002427.2| Homo sapiens matrix metalloproteinase 13 (collagenase 3) (MMP13),
mRNA
Length = 2722
Score = 275 bits (702), Expect = 1e-71
Identities = 176/489 (35%), Positives = 243/489 (48%), Gaps = 12/489 (2%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+ Y Y P + +A +M + MQ F+G+ +TGK+D NT+D MKKPRCGV
Sbjct: 146 ERYLRSY-YHPTNLAGILKENAASSMTERLREMQSFFGLEVTGKLDDNTLDVMKKPRCGV 322
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVT 163
PD ++N+ + KW ++ Y I N TP + +E KA ++AF VW +VT
Sbjct: 323 PDV----GEYNVFPRTL-----KWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVT 475
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PL F L +G DI I F HGD PFDG G LAHA+ PGP GGD HFD
Sbjct: 476 PLNFTR-----LHDGI--ADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFD 634
Query: 224 SDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDL 283
DE WT + G +LFLVA HE GH+LGL+HS DP A+M P Y Y +F LP+DD+
Sbjct: 635 DDETWTSSSK---GYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDV 805
Query: 284 QGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK-- 341
QGIQ +YG P K
Sbjct: 806 QGIQSLYGPGDED-----------------------------------------PNPKHP 862
Query: 342 --PNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 397
P+ CD + + + LR E +FKD++FWR+ +V D FW LP IDA
Sbjct: 863 KTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQV-DAELFLTKSFWPELPNRIDAA 1039
Query: 398 YENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YE+ + +F F+ KFW + GYP + LG I +A+ +ED GKT F
Sbjct: 1040YEHPSHDLIFIFRGRKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLF 1219
Query: 457 KGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYF----IKEKSTGN 511
G++ WRY + MD YP+ I + GI + V+++NG+ YF I+ + +
Sbjct: 1220SGNQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDA--VYEKNGYIYFFNGPIQFEYSIW 1393
Query: 512 STKMLRVEP 520
S +++RV P
Sbjct: 1394SNRIVRVMP 1420
>emb|X81334.1|HSCOLLAG3 H.sapiens mRNA for collagenase-3 protein
Length = 1946
Score = 275 bits (702), Expect = 1e-71
Identities = 176/489 (35%), Positives = 243/489 (48%), Gaps = 12/489 (2%)
Frame = +1
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+ Y Y P + +A +M + MQ F+G+ +TGK+D NT+D MKKPRCGV
Sbjct: 145 ERYLRSY-YHPTNLAGILKENAASSMTERLREMQSFFGLEVTGKLDDNTLDVMKKPRCGV 321
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVT 163
PD ++N+ + KW ++ Y I N TP + +E KA ++AF VW +VT
Sbjct: 322 PDV----GEYNVFPRTL-----KWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVT 474
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PL F L +G DI I F HGD PFDG G LAHA+ PGP GGD HFD
Sbjct: 475 PLNFTR-----LHDGI--ADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFD 633
Query: 224 SDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDL 283
DE WT + G +LFLVA HE GH+LGL+HS DP A+M P Y Y +F LP+DD+
Sbjct: 634 DDETWTSSSK---GYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDV 804
Query: 284 QGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK-- 341
QGIQ +YG P K
Sbjct: 805 QGIQSLYGPGDED-----------------------------------------PNPKHP 861
Query: 342 --PNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 397
P+ CD + + + LR E +FKD++FWR+ +V D FW LP IDA
Sbjct: 862 KTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQV-DAELFLTKSFWPELPNRIDAA 1038
Query: 398 YENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YE+ + +F F+ KFW + GYP + LG I +A+ +ED GKT F
Sbjct: 1039YEHPSHDLIFIFRGRKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLF 1218
Query: 457 KGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYF----IKEKSTGN 511
G++ WRY + MD YP+ I + GI + V+++NG+ YF I+ + +
Sbjct: 1219SGNQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDA--VYEKNGYIYFFNGPIQFEYSIW 1392
Query: 512 STKMLRVEP 520
S +++RV P
Sbjct: 1393SNRIVRVMP 1419
>emb|Z27093.1|XLSTROL3 X.laevis mRNA for stromelysin-3
Length = 2890
Score = 274 bits (700), Expect = 2e-71
Identities = 160/440 (36%), Positives = 220/440 (49%), Gaps = 5/440 (1%)
Frame = +3
Query: 99 PRCGVPD--QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAF 156
PRCGVPD SS R+KR+ L+G +W ++ Y I ++ + R+ I A
Sbjct: 399 PRCGVPDIPAPPDSSSGRNRQKRFVLSGGRWDKTNLTYKIIRFPWQLSKVKVRRTIAEAL 578
Query: 157 DVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGI 216
VW VTPLTF EV G+ D I I F +HGD+ PFDG GG LAHA+FP
Sbjct: 579 KVWSEVTPLTFTEV-----HEGRSD--IIIDFTRYWHGDNLPFDGPGGILAHAFFPKTHR 737
Query: 217 GGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNF 276
GD HFD DE WT+G N+ G DL VA HE GH LGL+HS+ ++M+PFY +
Sbjct: 738 EGDVHFDYDEAWTIG--NNIGTDLLQVAAHEFGHMLGLQHSSISKSLMSPFYTFRYP--L 905
Query: 277 KLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXS 336
L DD GIQ +YG P
Sbjct: 906 SLSADDKHGIQFLYGA---------------------PRPPTPSPTPRVEVNQVENESNE 1022
Query: 337 YPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDA 396
P A+P+ C NF+ + +R E+F FK + WR+R ++ +GYP + WRG+P ++DA
Sbjct: 1023IPAAEPDACKTNFDAVSTIRGELFFFKSGYVWRLRGGKLQNGYPALASRHWRGIPDTVDA 1202
Query: 397 VYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWW--EDVGKTY 454
+E+S GN FF ++FWVF D LQ P + +G + I +A W E KTY
Sbjct: 1203AFEDSVGNIWFFYGSQFWVF-DGKLQASGPFPITDIGISVTQ--IQAAFVWGTEKNKKTY 1373
Query: 455 FFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTK 514
F+G YWR+ E R ++ + + I W+G+P+ AF E G+ YF+K +
Sbjct: 1374LFRGGEYWRFNPETRRVESRHSRRIGDWRGVPKGIDAAF-QDEQGYAYFVKGRQYWKFDP 1550
Query: 515 M-LRVEPGYPRSILKDFMGC 533
+RV GYP I +DF C
Sbjct: 1551FKVRVMDGYPHLISQDFFNC 1610
>gb|U41824.1|XLU41824 Xenopus laevis collagenase-3 (gene A) mRNA, complete cds
Length = 2960
Score = 274 bits (700), Expect = 2e-71
Identities = 165/445 (37%), Positives = 233/445 (52%), Gaps = 4/445 (0%)
Frame = +1
Query: 63 LRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYAL 122
++ ++++ + MQ F+G+ +TGK++ +T+D MK+PRCGVPD G F R+
Sbjct: 184 MKDVNSVETKLKEMQSFFGLEVTGKLNEDTLDIMKQPRCGVPDV--GQYNFFPRKL---- 345
Query: 123 TGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDV 182
KW ++ Y I N TP + ++ +AI++A VW +VTPL F L G
Sbjct: 346 ---KWPRNNLTYRIVNYTPDLSTSDVDRAIKKALKVWSDVTPLNFTR-----LRTGT--A 495
Query: 183 DITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFL 242
DI + F HGD PFDG G LAHA+ PG IGGDTHFD DE ++ N G +LF+
Sbjct: 496 DIMVAFGKKEHGDYYPFDGPDGLLAHAFPPGEKIGGDTHFDDDEMFSTDNK---GYNLFV 666
Query: 243 VAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXX 302
VA HE GHALGL+HS DP ++M P Y Y ET F LP+DD+QGIQ +YG
Sbjct: 667 VAAHEFGHALGLDHSRDPGSLMFPVYTYTETSRFVLPDDDVQGIQALYG----------- 813
Query: 303 XXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGN--FNTLVILRREMF 360
+R P +P P CD + + + LR E
Sbjct: 814 ----SGNRDPHP---------------------KHP-KTPEKCDPDLTIDAITELRGEKM 915
Query: 361 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVF-FKSNKFWVFKDT 419
+FKD++FWRV + ++ D + I FW LP IDA YE+ + ++ F+ KFW
Sbjct: 916 IFKDRFFWRV-HPQMTDAELVLIKSFWPELPNKIDAAYEHPAKDLIYIFRGKKFWALNGY 1092
Query: 420 TLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPI 479
YP L LG ID+A++ + +GKT FF D YW + EE R+MD G+P+ I
Sbjct: 1093DFVEDYPKKLHELGFPKTLKAIDAAVYNKAIGKTLFFAEDSYWSFDEEARTMDKGFPRLI 1272
Query: 480 T-IWKGIPESPQGAFVHKENGFTYF 503
+ + GI E A+ + NG+ YF
Sbjct: 1273SEDFPGIGEKVDAAY--QRNGYIYF 1341
>gb|L49412.1|XELMMP1G Xenopus laevis collagenase 3 (MMP-13) mRNA, 3' end of cds
Length = 2850
Score = 273 bits (699), Expect = 3e-71
Identities = 164/445 (36%), Positives = 235/445 (51%), Gaps = 4/445 (0%)
Frame = +1
Query: 63 LRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYAL 122
+++ ++++ + MQ F+G+ +TGK++ +T+D MK+PRCGVPD G F R+
Sbjct: 166 MKNVNSIETKLKEMQSFFGLEVTGKLNEDTLDIMKQPRCGVPDV--GQYNFFPRKL---- 327
Query: 123 TGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDV 182
KW ++ Y I N TP + +E +AI++A VW +VTPL F L G
Sbjct: 328 ---KWPRNNLTYRIVNYTPDLSTSEVDRAIKKALKVWSDVTPLNFTR-----LRTGT--A 477
Query: 183 DITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFL 242
DI + F HGD PFDG G LAHA+ PG +GGDTHFD DE ++ N G +LF+
Sbjct: 478 DIMVSFGKKEHGDYYPFDGPDGLLAHAFPPGEKLGGDTHFDDDEMFSTDNK---GYNLFV 648
Query: 243 VAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXX 302
VA HE GHALGL+HS DP ++M P Y Y ET F LP+DD+QGIQ +YG
Sbjct: 649 VAAHEFGHALGLDHSRDPGSLMFPVYTYTETSRFVLPDDDVQGIQVLYG----------- 795
Query: 303 XXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDG--NFNTLVILRREMF 360
+R P +P P CD + + + LR E
Sbjct: 796 ----PGNRDPHP---------------------KHP-KTPEKCDPDLSIDAITELRGEKM 897
Query: 361 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVF-FKSNKFWVFKDT 419
+FKD++FWRV + ++ D + I FW LP +DA YE+ + + F+ KFW
Sbjct: 898 IFKDRFFWRV-HPQMTDAELVLIKSFWPELPNKLDAAYEHPAKDLSYLFRGKKFWALNGY 1074
Query: 420 TLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPI 479
+ YP L LG ID+A++ +D GKT+FF D YW + EE R++D G+P+ I
Sbjct: 1075DIVEDYPKKLHELGFPKTLKAIDAAVYNKDTGKTFFFTEDSYWSFDEEARTLDKGFPRLI 1254
Query: 480 T-IWKGIPESPQGAFVHKENGFTYF 503
+ + GI E A+ + NG+ YF
Sbjct: 1255SEDFPGIGEKVDAAY--QRNGYLYF 1323
>gb|AF059201.1|AF059201 Oryctolagus cuniculus collagenase-3 precursor, mRNA, complete cds
Length = 3124
Score = 273 bits (698), Expect = 4e-71
Identities = 171/474 (36%), Positives = 234/474 (49%), Gaps = 8/474 (1%)
Frame = +1
Query: 38 EQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMK 97
E + E +L+ Y Y P + +A +M + MQ F+G+ +TGK+D NT+ MK
Sbjct: 766 EDFQFAESYLRSY-YHPLNPAGILKKNAAGSMVDRLREMQSFFGLEVTGKLDDNTLAIMK 942
Query: 98 KPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFD 157
+PRCGVPD ++N+ + KW ++ Y I N TP + +E KA ++AF
Sbjct: 943 QPRCGVPDV----GEYNVFPRTL-----KWSQTNLTYRIVNYTPDLTHSEVEKAFKKAFK 1095
Query: 158 VWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 217
VW +VTPL F + NG DI I F + HGD PFDG G LAHA+ PGP G
Sbjct: 1096 VWSDVTPLNFTRI-----HNGT--ADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYG 1254
Query: 218 GDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFK 277
GD HFD DE WT + G +LFLVA HE GH+LGL+HS DP A+M P Y Y +F
Sbjct: 1255 GDAHFDDDETWTSSSK---GYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFM 1425
Query: 278 LPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSY 337
LP+DD+QGIQ +YG
Sbjct: 1426 LPDDDVQGIQSLYGPGDED----------------------------------------- 1482
Query: 338 PGAK----PNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLP 391
P K P+ CD + + + LR E +FKD++FWR+ +V D FW LP
Sbjct: 1483 PNPKHPKTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQV-DAELFLTKSFWPELP 1659
Query: 392 PSIDAVYENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDV 450
IDA YE+ + +F F+ KFW + GYP L LG I +A+ +ED
Sbjct: 1660 NRIDAAYEHPARDLIFIFRGKKFWAPNGYDILEGYPQKLSELGFPREVKKISAAVHFEDT 1839
Query: 451 GKTYFFKGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYF 503
GKT FF G++ W Y + +MD YP+ I + GI V+++NG+ YF
Sbjct: 1840 GKTLFFSGNQVWSYDDTNHTMDQDYPRLIEEEFPGIGGKVDA--VYEKNGYIYF 1995
>dbj|D82055.1|D82055 Cynops pyrrhogaster mRNA for collagenase 3, complete cds
Length = 3981
Score = 273 bits (698), Expect = 4e-71
Identities = 170/464 (36%), Positives = 245/464 (52%), Gaps = 9/464 (1%)
Frame = +1
Query: 64 RSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALT 123
+ + S + MQ F+ + +TGK+D +T++ MK+PRCGVPD ++N+ +
Sbjct: 187 KGGNALASKLREMQSFFDLEVTGKLDEDTLEVMKQPRCGVPDV----GEYNVFPRSL--- 345
Query: 124 GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVD 183
KW ++ Y I+N TP + AE +AI++AF VW VTPL F L +G D
Sbjct: 346 --KWPRFNLTYRIENYTPDMTHAEVDRAIKKAFRVWSEVTPLNFTR-----LRSGT--AD 498
Query: 184 ITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLV 243
I I F + HGD PFDG G LAHA+ PG IGGDTHFD DE +T G+ +G +LF+V
Sbjct: 499 IMISFGTKEHGDFYPFDGPNGLLAHAFPPGQRIGGDTHFDDDETFTSGS---NGYNLFIV 669
Query: 244 AVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXX 303
A HE GHALGL+HS DP ++M P Y Y E F LP+DD+QGIQ +YG
Sbjct: 670 AAHEFGHALGLDHSRDPGSLMYPVYSYTEPSRFLLPDDDVQGIQSLYG------------ 813
Query: 304 XXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDG--NFNTLVILRREMFV 361
+R P +P P CD + + + +R E +
Sbjct: 814 ---PGNRDPNP---------------------KHP-KTPEKCDPELSLDAITEMRGEKLI 918
Query: 362 FKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVF-FKSNKFWVFKDTT 420
FKD++FWR ++ ++ D + I FW LP IDA YE E + ++ F+ KFW
Sbjct: 919 FKDRFFWR-QHPQMTDVELVLIRNFWPELPSKIDAAYEYPEKDLIYIFRGRKFWALNGYD 1095
Query: 421 LQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT 480
+ YP + LG ID+A++ +GKT FF G++YW + EE ++++ GYP+ I
Sbjct: 1096ILADYPKKIQELGFPKSLRTIDAAVYNRAMGKTLFFTGEKYWSFDEEKQTVEKGYPRFIA 1275
Query: 481 -IWKGIPESPQGAFVHKENGFTYFIK-----EKSTGNSTKMLRV 518
+ GI E+ A+ + NG+ YF E ST S K++RV
Sbjct: 1276DDFPGIGETVDAAY--QRNGYIYFFSGSLQFEYSTW-SNKVIRV 1398
>emb|X54925.1|HSCOLL1 H.sapiens mRNA for type I interstitial collagenase
Length = 1970
Score = 272 bits (696), Expect = 6e-71
Identities = 175/470 (37%), Positives = 241/470 (51%), Gaps = 9/470 (1%)
Frame = +3
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+KY L ++ R++ + + MQ+F+G+ +TGK D T+ MK+PRCG
Sbjct: 168 VQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCG 347
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
VPD + + LT +W+ H+ Y I+N TP + A+ AI +AF +W
Sbjct: 348 VPDVAQ-----------FVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWS 494
Query: 161 NVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
NVTPLTF +V + DI I F G H D+SPFDG GG LAHA+ PGPGIGGD
Sbjct: 495 NVTPLTFTKV-------SEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDA 653
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT N +L VA HELGH+LGL HS D A+M P Y + + + +L
Sbjct: 654 HFDEDERWT---NNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--SGDVQLAQ 818
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ IYG RS P
Sbjct: 819 DDIDGIQAIYG------------------RSQNPVQPIGPQT------------------ 890
Query: 341 KPNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAV 397
P CD F+ + +R E+ FKD+++ +R N + I+ FW LP ++A
Sbjct: 891 -PKACDSKLTFDAITTIRGEVMFFKDRFY--MRTNPFYPEVELNFISVFWPQLPNGLEAA 1061
Query: 398 YENSEGNFV-FFKSNKFWVFKDTTLQPGYPHDLITLGSGIPS--HGIDSAIWWEDVGKTY 454
YE ++ + V FFK NK+W + + GYP D+ + G P ID+A+ E+ GKTY
Sbjct: 1062YEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYS-SFGFPRTVKHIDAALSEENTGKTY 1238
Query: 455 FFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYF 503
FF ++YWRY E RSMDPGYPK I + GI F+ ++GF YF
Sbjct: 1239FFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFM--KDGFFYF 1382
>ref|NM_002421.2| Homo sapiens matrix metalloproteinase 1 (interstitial collagenase)
(MMP1), mRNA
Length = 1973
Score = 272 bits (696), Expect = 6e-71
Identities = 175/470 (37%), Positives = 241/470 (51%), Gaps = 9/470 (1%)
Frame = +3
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+KY L ++ R++ + + MQ+F+G+ +TGK D T+ MK+PRCG
Sbjct: 171 VQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCG 350
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
VPD + + LT +W+ H+ Y I+N TP + A+ AI +AF +W
Sbjct: 351 VPDVAQ-----------FVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWS 497
Query: 161 NVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
NVTPLTF +V + DI I F G H D+SPFDG GG LAHA+ PGPGIGGD
Sbjct: 498 NVTPLTFTKV-------SEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDA 656
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT N +L VA HELGH+LGL HS D A+M P Y + + + +L
Sbjct: 657 HFDEDERWT---NNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--SGDVQLAQ 821
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ IYG RS P
Sbjct: 822 DDIDGIQAIYG------------------RSQNPVQPIGPQT------------------ 893
Query: 341 KPNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAV 397
P CD F+ + +R E+ FKD+++ +R N + I+ FW LP ++A
Sbjct: 894 -PKACDSKLTFDAITTIRGEVMFFKDRFY--MRTNPFYPEVELNFISVFWPQLPNGLEAA 1064
Query: 398 YENSEGNFV-FFKSNKFWVFKDTTLQPGYPHDLITLGSGIPS--HGIDSAIWWEDVGKTY 454
YE ++ + V FFK NK+W + + GYP D+ + G P ID+A+ E+ GKTY
Sbjct: 1065YEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYS-SFGFPRTVKHIDAALSEENTGKTY 1241
Query: 455 FFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYF 503
FF ++YWRY E RSMDPGYPK I + GI F+ ++GF YF
Sbjct: 1242FFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFM--KDGFFYF 1385
>dbj|AK024818.1|AK024818 Homo sapiens cDNA: FLJ21165 fis, clone CAS10833, highly similar to
HSCOLL1 Homo sapiens mRNA for type I interstitial
collagenase
Length = 1988
Score = 272 bits (696), Expect = 6e-71
Identities = 175/470 (37%), Positives = 241/470 (51%), Gaps = 9/470 (1%)
Frame = +1
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+KY L ++ R++ + + MQ+F+G+ +TGK D T+ MK+PRCG
Sbjct: 166 VQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCG 345
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
VPD + + LT +W+ H+ Y I+N TP + A+ AI +AF +W
Sbjct: 346 VPDVAQ-----------FVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWS 492
Query: 161 NVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
NVTPLTF +V + DI I F G H D+SPFDG GG LAHA+ PGPGIGGD
Sbjct: 493 NVTPLTFTKV-------SEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDA 651
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT N +L VA HELGH+LGL HS D A+M P Y + + + +L
Sbjct: 652 HFDEDERWT---NNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--SGDVQLAQ 816
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ IYG RS P
Sbjct: 817 DDIDGIQAIYG------------------RSQNPVQPIGPQT------------------ 888
Query: 341 KPNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAV 397
P CD F+ + +R E+ FKD+++ +R N + I+ FW LP ++A
Sbjct: 889 -PKACDSKLTFDAITTIRGEVMFFKDRFY--MRTNPFYPEVELNFISVFWPQLPNGLEAA 1059
Query: 398 YENSEGNFV-FFKSNKFWVFKDTTLQPGYPHDLITLGSGIPS--HGIDSAIWWEDVGKTY 454
YE ++ + V FFK NK+W + + GYP D+ + G P ID+A+ E+ GKTY
Sbjct: 1060YEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYS-SFGFPRTVKHIDAALSEENTGKTY 1236
Query: 455 FFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYF 503
FF ++YWRY E RSMDPGYPK I + GI F+ ++GF YF
Sbjct: 1237FFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFM--KDGFFYF 1380
>gb|BC013875.1|BC013875 Homo sapiens, Similar to matrix metalloproteinase 1 (interstitial
collagenase), clone MGC:10479 IMAGE:3834572, mRNA,
complete cds
Length = 2057
Score = 272 bits (696), Expect = 6e-71
Identities = 175/470 (37%), Positives = 241/470 (51%), Gaps = 9/470 (1%)
Frame = +1
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+KY L ++ R++ + + MQ+F+G+ +TGK D T+ MK+PRCG
Sbjct: 151 VQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCG 330
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
VPD + + LT +W+ H+ Y I+N TP + A+ AI +AF +W
Sbjct: 331 VPDVAQ-----------FVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWS 477
Query: 161 NVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
NVTPLTF +V + DI I F G H D+SPFDG GG LAHA+ PGPGIGGD
Sbjct: 478 NVTPLTFTKV-------SEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDA 636
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT N +L VA HELGH+LGL HS D A+M P Y + + + +L
Sbjct: 637 HFDEDERWT---NNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--SGDVQLAQ 801
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ IYG RS P
Sbjct: 802 DDIDGIQAIYG------------------RSQNPVQPIGPQT------------------ 873
Query: 341 KPNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAV 397
P CD F+ + +R E+ FKD+++ +R N + I+ FW LP ++A
Sbjct: 874 -PKACDSKLTFDAITTIRGEVMFFKDRFY--MRTNPFYPEVELNFISVFWPQLPNGLEAA 1044
Query: 398 YENSEGNFV-FFKSNKFWVFKDTTLQPGYPHDLITLGSGIPS--HGIDSAIWWEDVGKTY 454
YE ++ + V FFK NK+W + + GYP D+ + G P ID+A+ E+ GKTY
Sbjct: 1045YEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYS-SFGFPRTVKHIDAALSEENTGKTY 1221
Query: 455 FFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYF 503
FF ++YWRY E RSMDPGYPK I + GI F+ ++GF YF
Sbjct: 1222FFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFM--KDGFFYF 1365
>gb|M25664.1|RABSTROM Rabbit metalloproteinase synovial cell activator mRNA, complete cds
Length = 1795
Score = 271 bits (693), Expect = 1e-70
Identities = 169/471 (35%), Positives = 238/471 (49%), Gaps = 5/471 (1%)
Frame = +1
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
++ +L+ Y L + + + + I MQ+F G+ +TGK+D NT++ ++KPRCG
Sbjct: 154 LQQYLENYYNLEKDVKQFVKRKDSSPVVKKIQEMQKFLGLEVTGKLDSNTLEVIRKPRCG 333
Query: 103 VPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNV 162
VPD S+ KW H+ Y I N TP + AI +A VW+ V
Sbjct: 334 VPDVGHFSTFPGT---------PKWTKTHLTYRIVNYTPDLPRDAVDAAIEKALKVWEEV 486
Query: 163 TPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPLTF + + DI I F HGD PFDG G LAHAY PGPGI GD HF
Sbjct: 487 TPLTFSR-------KYEGEADIMISFGVREHGDFIPFDGPGNVLAHAYAPGPGINGDAHF 645
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ-YMETDNFKLPND 281
D DE WT + G +LFLVA HELGH+LGL HS +P A+M P Y + + F+L D
Sbjct: 646 DDDEQWT---KDTTGTNLFLVAAHELGHSLGLFHSANPEALMYPVYNAFTDLARFRLSQD 816
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK 341
D+ GIQ +YG +PP
Sbjct: 817 DVDGIQSLYGPAPASPDNSGVPM-----EPVPPG-----------------------SGT 912
Query: 342 PNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
P +CD +F+ + LR E+ FKD++FWR ++ R+++ I+ FW LP ++DA YE
Sbjct: 913 PVMCDPDLSFDAISTLRGEILFFKDRYFWR-KSLRILEPEFHLISSFWPSLPSAVDAAYE 1089
Query: 400 NSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
+ VF FK +FW + +Q GYP + TLG ID+AI ++ KTYFF
Sbjct: 1090VISRDTVFIFKGTQFWAIRGNEVQAGYPRSIHTLGFPSTIRKIDAAISDKERKKTYFFVE 1269
Query: 459 DRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKEKS 508
D+YWR+ E+ +S++PG+P+ I + GI +P+ V + GF YF S
Sbjct: 1270DKYWRFDEKRQSLEPGFPRHIAEDFPGI--NPKIDAVFEAFGFFYFFSGSS 1416
Score = 54.3 bits (129), Expect = 3e-05
Identities = 46/151 (30%), Positives = 71/151 (46%), Gaps = 5/151 (3%)
Frame = +1
Query: 393 SIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGK 452
S DA+ G +FFK FW L+P + H + + +PS +D+A
Sbjct: 937 SFDAI-STLRGEILFFKDRYFWRKSLRILEPEF-HLISSFWPSLPS-AVDAAYEVISRDT 1107
Query: 453 TYFFKGDRYWRY-GEEMRSMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYF-IKEK 507
+ FKG ++W G E+++ GYP+ I G P + + A KE TYF +++K
Sbjct: 1108 VFIFKGTQFWAIRGNEVQA---GYPRSIHTL-GFPSTIRKIDAAISDKERKKTYFFVEDK 1275
Query: 508 STGNSTKMLRVEPGYPRSILKDFMGCDGPTD 538
K +EPG+PR I +DF G + D
Sbjct: 1276 YWRFDEKRQSLEPGFPRHIAEDFPGINPKID 1368
>emb|X54724.1|SSMMP1 Porcine mmp1 mRNA for matrix metalloproteinase (type I collagenase)
(EC 3.4.24.7)
Length = 1336
Score = 271 bits (693), Expect = 1e-70
Identities = 173/469 (36%), Positives = 238/469 (49%), Gaps = 8/469 (1%)
Frame = +2
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+ Y L + R++ + + MQQF+G+ +TGK D T++ MK+PRCG
Sbjct: 29 VQKYLKNYYNLNSDGVPVEKKRNSGLVVEKLKQMQQFFGLKVTGKPDAETLNVMKQPRCG 208
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
VPD + LT +W++ H+ Y I+N TP + + +AI +AF +W
Sbjct: 209 VPDVAE-----------FVLTPGNPRWENTHLTYRIENYTPDLSREDVDRAIEKAFQLWS 355
Query: 161 NVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
NV+PLTF +V + DI I F G H D+SPFDG GG LAHA+ PGPGIGGD
Sbjct: 356 NVSPLTFTKV-------SEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDA 514
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT N +L+ VA HELGH+LGL HS D A+M P Y Y T + +L
Sbjct: 515 HFDEDERWT---KNFRDYNLYRVAAHELGHSLGLSHSTDIGALMYPNYIY--TGDVQLSQ 679
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ IYG + P+
Sbjct: 680 DDIDGIQAIYG---------------PSENPVQPSGPQT--------------------- 751
Query: 341 KPNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVY 398
P +CD F+ + LR E+ FKD+++ R N+ + I+ FW +P + A Y
Sbjct: 752 -PQVCDSKLTFDAITTLRGELMFFKDRFYMRT-NSFYPEVELNFISVFWPQVPNGLQAAY 925
Query: 399 ENSEGNFV-FFKSNKFWVFKDTTLQPGYPHDLITLGSGIPS--HGIDSAIWWEDVGKTYF 455
E ++ + V FFK NK+W + + GYP D I G PS ID+A++ ED GKTYF
Sbjct: 926 EIADRDEVRFFKGNKYWAVRGQDVLYGYPKD-IHRSFGFPSTVKNIDAAVFEEDTGKTYF 1102
Query: 456 FKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYF 503
F WRY E +SMD GYPK I + GI F +++GF YF
Sbjct: 1103FVAHECWRYDEYKQSMDTGYPKMIAEEFPGIGNKVDAVF--QKDGFLYF 1243
>gb|M60616.1|RATCOL Rat collagenase (UMRCase) mRNA, 3' end
Length = 2607
Score = 271 bits (692), Expect = 2e-70
Identities = 170/489 (34%), Positives = 244/489 (49%), Gaps = 12/489 (2%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+ Y Y P T + + + + MQ F+G+++TGK+D T+D M+KPRCGV
Sbjct: 104 EHYLKSY-YHPVTLAGILKKSTVTSTVDRLREMQSFFGLDVTGKLDDPTLDIMRKPRCGV 280
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVT 163
PD +N+ + KW ++ Y I N TP + +E KA R+AF VW +VT
Sbjct: 281 PDV----GVYNVFPRTL-----KWSQTNLTYRIVNYTPDISHSEVEKAFRKAFKVWSDVT 433
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PL F + +G DI I F + HGD PFDG G LAHA+ PGP +GGD HFD
Sbjct: 434 PLNFTRI-----HDGT--ADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNLGGDAHFD 592
Query: 224 SDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDL 283
DE WT + G +LF+VA HELGH+LGL+HS DP A+M P Y Y +F LP+DD+
Sbjct: 593 DDETWTSSSK---GYNLFIVAAHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDV 763
Query: 284 QGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK-- 341
QGIQ +YG P K
Sbjct: 764 QGIQSLYGPGDED-----------------------------------------PNPKHP 820
Query: 342 --PNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 397
P CD + + + LR E +FKD++FWR+ +V + FW LP +DA
Sbjct: 821 KTPEKCDPALSLDAITSLRGETMIFKDRFFWRLHPQQV-EPELFLTKSFWPELPNHVDAA 997
Query: 398 YENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YE+ + +F F+ KFW + GYP + LG + +A+ +ED GKT FF
Sbjct: 998 YEHPSRDLMFIFRGRKFWALNGYDIMEGYPRKISDLGFPKEVKRLSAAVHFEDTGKTLFF 1177
Query: 457 KGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYF----IKEKSTGN 511
G+ W Y + ++MD YP+ I + GI + V+++NG+ YF I+ + +
Sbjct: 1178SGNHVWSYDDANQTMDKDYPRLIEEEFPGIGDKVDA--VYEKNGYIYFFNGPIQFEYSIW 1351
Query: 512 STKMLRVEP 520
S +++RV P
Sbjct: 1352SNRIVRVMP 1378
>gb|AE003464.1|AE003464 Drosophila melanogaster genomic scaffold 142000013386038 section 13 of
15, complete sequence
Length = 306848
Score = 204 bits (518), Expect(2) = 3e-70
Identities = 117/325 (36%), Positives = 164/325 (50%), Gaps = 1/325 (0%)
Frame = -2
Query: 182 VDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLF 241
+ +T F HGD FDG+GG LAHA+FP GGD HFD E WT+G+P G +LF
Sbjct: 298822 LSLTPRFVESEHGDGDAFDGQGGTLAHAFFPV--FGGDAHFDDAELWTIGSPR--GTNLF 298655
Query: 242 LVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXX 301
VA HE GH+LGL HS+ +A+MAPFY+ E FKL DD IQ +YG
Sbjct: 298654 QVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPV-FKLDEDDKAAIQSLYGRKTNQLRPTN 298478
Query: 302 XXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFV 361
PP K + D FN+ + E +
Sbjct: 298477 VYPATTQRPYSPPKVPLDDSI-----------------CKDSKVDTLFNSA---QGETYA 298358
Query: 362 FKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTL 421
FK ++++ + V +GYP I+ W GLP +IDA + G FFK ++W ++ +
Sbjct: 298357 FKGDKYYKLTTDSVEEGYPQLISKGWPGLPGNIDAAFTYKNGKTYFFKGTQYWRYQGRQM 298178
Query: 422 QPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRS-MDPGYPKPIT 480
YP ++ +GIP H +D+A+ W GK YFFKG ++WR+ R + YPKPI+
Sbjct: 298177 DGVYPKEISEGFTGIPDH-LDAAMVWGGNGKIYFFKGSKFWRFDPAKRPPVKASYPKPIS 298001
Query: 481 IWKGIPESPQGAFVHKENGFTYFIK 505
W+G+P + A + NG+TYF K
Sbjct: 298000 NWEGVPNNLDAALKY-TNGYTYFFK 297929
Score = 88.6 bits (218), Expect(2) = 3e-70
Identities = 50/127 (39%), Positives = 70/127 (54%), Gaps = 3/127 (2%)
Frame = -1
Query: 44 EVWLQKYGYLPPT--DPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
+++L ++GYLP + +P S L T SAI Q F G+N+TG++D T+ M PRC
Sbjct: 299282 QIYLSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRC 299103
Query: 102 GVPDQT-RGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
GV D+ G S R KRYAL G +W+ K++ Y I ++ + I RAF VW
Sbjct: 299102 GVRDRVGTGDS----RSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAEIGRAFAVWS 298935
Query: 161 NVTPLTF 167
T LTF
Sbjct: 298934 EDTDLTF 298914
Score = 74.7 bits (182), Expect = 2e-11
Identities = 47/136 (34%), Positives = 74/136 (53%), Gaps = 3/136 (2%)
Frame = -2
Query: 394 IDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKT 453
+D ++ +++G FK +K++ +++ GYP + G+P + ID+A +++ GKT
Sbjct: 298399 VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPGN-IDAAFTYKN-GKT 298226
Query: 454 YFFKGDRYWRYGEEMRSMDPGYPKPITI-WKGIPESPQGAFVHKENGFTYFIKEKS--TG 510
YFFKG +YWRY + R MD YPK I+ + GIP+ A V NG YF K
Sbjct: 298225 YFFKGTQYWRY--QGRQMDGVYPKEISEGFTGIPDHLDAAMVWGGNGKIYFFKGSKFWRF 298052
Query: 511 NSTKMLRVEPGYPRSI 526
+ K V+ YP+ I
Sbjct: 298051 DPAKRPPVKASYPKPI 298004
Score = 40.4 bits (93), Expect = 0.51
Identities = 21/64 (32%), Positives = 34/64 (52%), Gaps = 3/64 (4%)
Frame = -2
Query: 358 EMFVFKDQWFWR---VRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFW 414
+++ FK FWR + V YP I+ W G+P ++DA + + G FFK +K++
Sbjct: 298090 KIYFFKGSKFWRFDPAKRPPVKASYPKPISN-WEGVPNNLDAALKYTNGYTYFFKGDKYY 297914
Query: 415 VFKD 418
F D
Sbjct: 297913 RFHD 297902
>gb|AC099037.1| Drosophila melanogaster, chromosome 2R, region 60E-60F, BAC clone
BACR27P17, complete sequence
Length = 193322
Score = 204 bits (518), Expect(2) = 3e-70
Identities = 117/325 (36%), Positives = 164/325 (50%), Gaps = 1/325 (0%)
Frame = +2
Query: 182 VDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLF 241
+ +T F HGD FDG+GG LAHA+FP GGD HFD E WT+G+P G +LF
Sbjct: 181427 LSLTPRFVESEHGDGDAFDGQGGTLAHAFFPV--FGGDAHFDDAELWTIGSPR--GTNLF 181594
Query: 242 LVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXX 301
VA HE GH+LGL HS+ +A+MAPFY+ E FKL DD IQ +YG
Sbjct: 181595 QVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPV-FKLDEDDKAAIQSLYGRKTNQLRPTN 181771
Query: 302 XXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFV 361
PP K + D FN+ + E +
Sbjct: 181772 VYPATTQRPYSPPKVPLDDSI-----------------CKDSKVDTLFNSA---QGETYA 181891
Query: 362 FKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTL 421
FK ++++ + V +GYP I+ W GLP +IDA + G FFK ++W ++ +
Sbjct: 181892 FKGDKYYKLTTDSVEEGYPQLISKGWPGLPGNIDAAFTYKNGKTYFFKGTQYWRYQGRQM 182071
Query: 422 QPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMR-SMDPGYPKPIT 480
YP ++ +GIP H +D+A+ W GK YFFKG ++WR+ R + YPKPI+
Sbjct: 182072 DGVYPKEISEGFTGIPDH-LDAAMVWGGNGKIYFFKGSKFWRFDPAKRPPVKASYPKPIS 182248
Query: 481 IWKGIPESPQGAFVHKENGFTYFIK 505
W+G+P + A + NG+TYF K
Sbjct: 182249 NWEGVPNNLDAALKY-TNGYTYFFK 182320
Score = 88.6 bits (218), Expect(2) = 3e-70
Identities = 50/127 (39%), Positives = 70/127 (54%), Gaps = 3/127 (2%)
Frame = +1
Query: 44 EVWLQKYGYLPPT--DPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
+++L ++GYLP + +P S L T SAI Q F G+N+TG++D T+ M PRC
Sbjct: 180967 QIYLSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRC 181146
Query: 102 GVPDQT-RGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
GV D+ G S R KRYAL G +W+ K++ Y I ++ + I RAF VW
Sbjct: 181147 GVRDRVGTGDS----RSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAEIGRAFAVWS 181314
Query: 161 NVTPLTF 167
T LTF
Sbjct: 181315 EDTDLTF 181335
Score = 74.7 bits (182), Expect = 2e-11
Identities = 47/136 (34%), Positives = 74/136 (53%), Gaps = 3/136 (2%)
Frame = +2
Query: 394 IDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKT 453
+D ++ +++G FK +K++ +++ GYP + G+P + ID+A +++ GKT
Sbjct: 181850 VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPGN-IDAAFTYKN-GKT 182023
Query: 454 YFFKGDRYWRYGEEMRSMDPGYPKPITI-WKGIPESPQGAFVHKENGFTYFIKEKS--TG 510
YFFKG +YWRY + R MD YPK I+ + GIP+ A V NG YF K
Sbjct: 182024 YFFKGTQYWRY--QGRQMDGVYPKEISEGFTGIPDHLDAAMVWGGNGKIYFFKGSKFWRF 182197
Query: 511 NSTKMLRVEPGYPRSI 526
+ K V+ YP+ I
Sbjct: 182198 DPAKRPPVKASYPKPI 182245
Score = 40.4 bits (93), Expect = 0.51
Identities = 21/64 (32%), Positives = 34/64 (52%), Gaps = 3/64 (4%)
Frame = +2
Query: 358 EMFVFKDQWFWR---VRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFW 414
+++ FK FWR + V YP I+ W G+P ++DA + + G FFK +K++
Sbjct: 182159 KIYFFKGSKFWRFDPAKRPPVKASYPKPISN-WEGVPNNLDAALKYTNGYTYFFKGDKYY 182335
Query: 415 VFKD 418
F D
Sbjct: 182336 RFHD 182347
>gb|AC007925.5|AC007925 Drosophila melanogaster, chromosome 2R, region 60E-60E, BAC clone
BACR03B07, complete sequence
Length = 170089
Score = 204 bits (518), Expect(2) = 3e-70
Identities = 117/325 (36%), Positives = 164/325 (50%), Gaps = 1/325 (0%)
Frame = -3
Query: 182 VDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLF 241
+ +T F HGD FDG+GG LAHA+FP GGD HFD E WT+G+P G +LF
Sbjct: 26585 LSLTPRFVESEHGDGDAFDGQGGTLAHAFFPV--FGGDAHFDDAELWTIGSPR--GTNLF 26418
Query: 242 LVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXX 301
VA HE GH+LGL HS+ +A+MAPFY+ E FKL DD IQ +YG
Sbjct: 26417 QVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPV-FKLDEDDKAAIQSLYGRKTNQLRPTN 26241
Query: 302 XXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFV 361
PP K + D FN+ + E +
Sbjct: 26240 VYPATTQRPYSPPKVPLDDSI-----------------CKDSKVDTLFNSA---QGETYA 26121
Query: 362 FKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTL 421
FK ++++ + V +GYP I+ W GLP +IDA + G FFK ++W ++ +
Sbjct: 26120 FKGDKYYKLTTDSVEEGYPQLISKGWPGLPGNIDAAFTYKNGKTYFFKGTQYWRYQGRQM 25941
Query: 422 QPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRS-MDPGYPKPIT 480
YP ++ +GIP H +D+A+ W GK YFFKG ++WR+ R + YPKPI+
Sbjct: 25940 DGVYPKEISEGFTGIPDH-LDAAMVWGGNGKIYFFKGSKFWRFDPAKRPPVKASYPKPIS 25764
Query: 481 IWKGIPESPQGAFVHKENGFTYFIK 505
W+G+P + A + NG+TYF K
Sbjct: 25763 NWEGVPNNLDAALKY-TNGYTYFFK 25692
Score = 88.6 bits (218), Expect(2) = 3e-70
Identities = 50/127 (39%), Positives = 70/127 (54%), Gaps = 3/127 (2%)
Frame = -2
Query: 44 EVWLQKYGYLPPT--DPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
+++L ++GYLP + +P S L T SAI Q F G+N+TG++D T+ M PRC
Sbjct: 27045 QIYLSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRC 26866
Query: 102 GVPDQT-RGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
GV D+ G S R KRYAL G +W+ K++ Y I ++ + I RAF VW
Sbjct: 26865 GVRDRVGTGDS----RSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAEIGRAFAVWS 26698
Query: 161 NVTPLTF 167
T LTF
Sbjct: 26697 EDTDLTF 26677
Score = 74.7 bits (182), Expect = 2e-11
Identities = 47/136 (34%), Positives = 74/136 (53%), Gaps = 3/136 (2%)
Frame = -3
Query: 394 IDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKT 453
+D ++ +++G FK +K++ +++ GYP + G+P + ID+A +++ GKT
Sbjct: 26162 VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPGN-IDAAFTYKN-GKT 25989
Query: 454 YFFKGDRYWRYGEEMRSMDPGYPKPITI-WKGIPESPQGAFVHKENGFTYFIKEKS--TG 510
YFFKG +YWRY + R MD YPK I+ + GIP+ A V NG YF K
Sbjct: 25988 YFFKGTQYWRY--QGRQMDGVYPKEISEGFTGIPDHLDAAMVWGGNGKIYFFKGSKFWRF 25815
Query: 511 NSTKMLRVEPGYPRSI 526
+ K V+ YP+ I
Sbjct: 25814 DPAKRPPVKASYPKPI 25767
Score = 40.4 bits (93), Expect = 0.51
Identities = 21/64 (32%), Positives = 34/64 (52%), Gaps = 3/64 (4%)
Frame = -3
Query: 358 EMFVFKDQWFWR---VRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFW 414
+++ FK FWR + V YP I+ W G+P ++DA + + G FFK +K++
Sbjct: 25853 KIYFFKGSKFWRFDPAKRPPVKASYPKPISN-WEGVPNNLDAALKYTNGYTYFFKGDKYY 25677
Query: 415 VFKD 418
F D
Sbjct: 25676 RFHD 25665
>gb|AC007581.5|AC007581 Drosophila melanogaster, chromosome 2R, region 60E-60E, BAC clone
BACR03I24, complete sequence
Length = 156508
Score = 204 bits (518), Expect(2) = 3e-70
Identities = 117/325 (36%), Positives = 164/325 (50%), Gaps = 1/325 (0%)
Frame = -3
Query: 182 VDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLF 241
+ +T F HGD FDG+GG LAHA+FP GGD HFD E WT+G+P G +LF
Sbjct: 104534 LSLTPRFVESEHGDGDAFDGQGGTLAHAFFPV--FGGDAHFDDAELWTIGSPR--GTNLF 104367
Query: 242 LVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXX 301
VA HE GH+LGL HS+ +A+MAPFY+ E FKL DD IQ +YG
Sbjct: 104366 QVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPV-FKLDEDDKAAIQSLYGRKTNQLRPTN 104190
Query: 302 XXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFV 361
PP K + D FN+ + E +
Sbjct: 104189 VYPATTQRPYSPPKVPLDDSI-----------------CKDSKVDTLFNSA---QGETYA 104070
Query: 362 FKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTL 421
FK ++++ + V +GYP I+ W GLP +IDA + G FFK ++W ++ +
Sbjct: 104069 FKGDKYYKLTTDSVEEGYPQLISKGWPGLPGNIDAAFTYKNGKTYFFKGTQYWRYQGRQM 103890
Query: 422 QPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMR-SMDPGYPKPIT 480
YP ++ +GIP H +D+A+ W GK YFFKG ++WR+ R + YPKPI+
Sbjct: 103889 DGVYPKEISEGFTGIPDH-LDAAMVWGGNGKIYFFKGSKFWRFDPAKRPPVKASYPKPIS 103713
Query: 481 IWKGIPESPQGAFVHKENGFTYFIK 505
W+G+P + A + NG+TYF K
Sbjct: 103712 NWEGVPNNLDAALKY-TNGYTYFFK 103641
Score = 88.6 bits (218), Expect(2) = 3e-70
Identities = 50/127 (39%), Positives = 70/127 (54%), Gaps = 3/127 (2%)
Frame = -2
Query: 44 EVWLQKYGYLPPT--DPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
+++L ++GYLP + +P S L T SAI Q F G+N+TG++D T+ M PRC
Sbjct: 104994 QIYLSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRC 104815
Query: 102 GVPDQT-RGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
GV D+ G S R KRYAL G +W+ K++ Y I ++ + I RAF VW
Sbjct: 104814 GVRDRVGTGDS----RSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAEIGRAFAVWS 104647
Query: 161 NVTPLTF 167
T LTF
Sbjct: 104646 EDTDLTF 104626
Score = 74.7 bits (182), Expect = 2e-11
Identities = 47/136 (34%), Positives = 74/136 (53%), Gaps = 3/136 (2%)
Frame = -3
Query: 394 IDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKT 453
+D ++ +++G FK +K++ +++ GYP + G+P + ID+A +++ GKT
Sbjct: 104111 VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPGN-IDAAFTYKN-GKT 103938
Query: 454 YFFKGDRYWRYGEEMRSMDPGYPKPITI-WKGIPESPQGAFVHKENGFTYFIKEKS--TG 510
YFFKG +YWRY + R MD YPK I+ + GIP+ A V NG YF K
Sbjct: 103937 YFFKGTQYWRY--QGRQMDGVYPKEISEGFTGIPDHLDAAMVWGGNGKIYFFKGSKFWRF 103764
Query: 511 NSTKMLRVEPGYPRSI 526
+ K V+ YP+ I
Sbjct: 103763 DPAKRPPVKASYPKPI 103716
Score = 40.4 bits (93), Expect = 0.51
Identities = 21/64 (32%), Positives = 34/64 (52%), Gaps = 3/64 (4%)
Frame = -3
Query: 358 EMFVFKDQWFWR---VRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFW 414
+++ FK FWR + V YP I+ W G+P ++DA + + G FFK +K++
Sbjct: 103802 KIYFFKGSKFWRFDPAKRPPVKASYPKPISN-WEGVPNNLDAALKYTNGYTYFFKGDKYY 103626
Query: 415 VFKD 418
F D
Sbjct: 103625 RFHD 103614
>emb|X05231.1|HSCOLLR Human mRNA for collagenase (E.C. 3.4.24)
Length = 1968
Score = 270 bits (690), Expect = 3e-70
Identities = 174/470 (37%), Positives = 239/470 (50%), Gaps = 9/470 (1%)
Frame = +1
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+KY L ++ R++ + + MQ+F+G+ +TGK D T+ MK+PRCG
Sbjct: 166 VQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCG 345
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
VPD + + LT +W+ H+ Y I+N TP + A+ AI +AF +W
Sbjct: 346 VPDVAQ-----------FVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWS 492
Query: 161 NVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
NVTPLTF +V + DI I F G H D+SPFDG GG LAHA+ PGPGIGGD
Sbjct: 493 NVTPLTFTKV-------SEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDA 651
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD E WT N +L VA HELGH+LGL HS D A+M P Y + + + +L
Sbjct: 652 HFDEHERWT---NNFTEYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--SGDVQLAQ 816
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ IYG RS P
Sbjct: 817 DDIDGIQAIYG------------------RSQNPVQPIGPQT------------------ 888
Query: 341 KPNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQIT-YFWRGLPPSIDAV 397
P CD F+ + +R E+ FKD+++ +R N + T FW LP ++A
Sbjct: 889 -PKACDSKLTFDAITTIRGEVMFFKDRFY--MRTNPFYPEVELNFTSVFWPQLPNGLEAA 1059
Query: 398 YENSEGNFV-FFKSNKFWVFKDTTLQPGYPHDLITLGSGIPS--HGIDSAIWWEDVGKTY 454
YE ++ + V FFK NK+W + + GYP D+ + G P ID+A+ E+ GKTY
Sbjct: 1060YEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYS-SFGFPRTVKHIDAALSEENTGKTY 1236
Query: 455 FFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYF 503
FF ++YWRY E RSMDPGYPK I + GI F+ ++GF YF
Sbjct: 1237FFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFM--KDGFFYF 1380
>gb|M13509.1|HUMCN2 Human skin collagenase mRNA, complete cds
Length = 1970
Score = 270 bits (689), Expect = 4e-70
Identities = 174/470 (37%), Positives = 240/470 (51%), Gaps = 9/470 (1%)
Frame = +3
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+KY L ++ R++ + + MQ+F+G+ +TGK D T+ MK+PRCG
Sbjct: 168 VQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCG 347
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
VPD + + LT +W+ H+ Y I+N TP + A+ AI +AF +W
Sbjct: 348 VPDVAQ-----------FVLTEGNPRWEQTHLRYRIENYTPDLPRADVDHAIEKAFQLWS 494
Query: 161 NVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
NVTPLTF +V + DI I F G H D+SPFDG GG LAHA+ PGPGIGGD
Sbjct: 495 NVTPLTFTKV-------SEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDA 653
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT N +L VA HELGH+LGL HS D A+M P Y + + + +L
Sbjct: 654 HFDEDERWT---NNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--SGDVQLAQ 818
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ IYG RS P
Sbjct: 819 DDIDGIQAIYG------------------RSQNPVQPIGPQT------------------ 890
Query: 341 KPNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAV 397
P CD F+ + +R E+ FKD+++ +R N + I+ FW LP ++A
Sbjct: 891 -PKACDSKLTFDAITTIRGEVMFFKDRFY--MRTNPFYPEVELNFISVFWPQLPNGLEAA 1061
Query: 398 YENSEGNFV-FFKSNKFWVFKDTTLQPGYPHDLITLGSGIPS--HGIDSAIWWEDVGKTY 454
YE ++ + V FFK NK+W + + GYP D+ + G P ID+A+ E+ GKTY
Sbjct: 1062YEFADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYS-SFGFPRTVKHIDAALSEENTGKTY 1238
Query: 455 FFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYF 503
FF ++YWRY E RSMDP YPK I + GI F+ ++GF YF
Sbjct: 1239FFVANKYWRYDEYKRSMDPSYPKMIAHDFPGIGHKVDAVFM--KDGFFYF 1382
>gb|BC006725.1|BC006725 Mus musculus, matrix metalloproteinase 3, clone MGC:11554
IMAGE:3962288, mRNA, complete cds
Length = 1783
Score = 268 bits (686), Expect = 9e-70
Identities = 179/502 (35%), Positives = 240/502 (47%), Gaps = 16/502 (3%)
Frame = +2
Query: 23 LQTCVWILCATVCKAEQYFN-----------VEVWLQKYGYLPPTDPRMSVLRSAETMQS 71
L +W LC VC + + ++ +L+ Y L + + + +
Sbjct: 56 LPVLLW-LCVVVCSSYPLHDSARDDDAGMELLQKYLENYYGLAKDVKQFIKKKDSSLIVK 232
Query: 72 AIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKH 131
I MQ+F G+ MTGK+D NT++ M KPRCGVPD G S F KW+ H
Sbjct: 233 KIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPD-VGGFSTFP--------GSPKWRKSH 385
Query: 132 IAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASG 191
I Y I N TP + AI +A VW+ VTPLTF + + + DI I FA G
Sbjct: 386 ITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSRI-------SEGEADIMISFAVG 544
Query: 192 FHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHA 251
HGD PFDG G LAHAY PGPGI GD HFD DE WT + G +LFLVA HELGH+
Sbjct: 545 EHGDFVPFDGPGTVLAHAYAPGPGINGDAHFDDDERWT---EDVTGTNLFLVAAHELGHS 715
Query: 252 LGLEHSNDPTAIMAPFYQ-YMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHR 310
LGL HS A+M P Y+ + F L DD+ GIQ +YG
Sbjct: 716 LGLYHSAKAEALMYPVYKSSTDLSRFHLSQDDVDGIQSLYGTPTASPDVLV--------- 868
Query: 311 SIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGN--FNTLVILRREMFVFKDQWFW 368
+P P P +C F+ + LR E+ FKD+ FW
Sbjct: 869 -VPTKSNSLE-----------------PETSP-MCSSTLFFDAVSTLRGEVLFFKDRHFW 991
Query: 369 RVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVF-FKSNKFWVFKDTTLQPGYPH 427
R ++ R + I+ FW LP ++DA YE + + VF FK N+FW + GYP
Sbjct: 992 R-KSLRTPEPEFYLISSFWPSLPSNMDAAYEVTNRDTVFIFKGNQFWAIRGHEELAGYPK 1168
Query: 428 DLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIP 486
+ TLG ID+AI ++ KTYFF D+YWR+ E+ +SM+PG+P+ I + G+
Sbjct: 1169SIHTLGLPATVKKIDAAISNKEKRKTYFFVEDKYWRFDEKKQSMEPGFPRKIAEDFPGVD 1348
Query: 487 ESPQGAFVHKENGFTYFIKEKS 508
F + GF YF S
Sbjct: 1349SRVDAVF--EAFGFLYFFSGSS 1408
Score = 56.6 bits (135), Expect = 7e-06
Identities = 45/142 (31%), Positives = 71/142 (49%), Gaps = 6/142 (4%)
Frame = +2
Query: 403 GNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYW 462
G +FFK FW T +P + + + + +PS+ +D+A + + FKG+++W
Sbjct: 956 GEVLFFKDRHFWRKSLRTPEPEF-YLISSFWPSLPSN-MDAAYEVTNRDTVFIFKGNQFW 1129
Query: 463 --RYGEEMRSMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYF-IKEKSTGNSTKML 516
R EE+ GYPK I G+P + + A +KE TYF +++K K
Sbjct: 1130 AIRGHEELA----GYPKSIHTL-GLPATVKKIDAAISNKEKRKTYFFVEDKYWRFDEKKQ 1294
Query: 517 RVEPGYPRSILKDFMGCDGPTD 538
+EPG+PR I +DF G D D
Sbjct: 1295 SMEPGFPRKIAEDFPGVDSRVD 1360
>gb|L76275.1|XELCOLL Xenopus laevis collagenase 4 precursor gene, complete cds
Length = 1609
Score = 268 bits (686), Expect = 9e-70
Identities = 169/471 (35%), Positives = 238/471 (49%), Gaps = 10/471 (2%)
Frame = +3
Query: 76 MQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYS 135
MQ+F+G+ +TG +D T++ M+KPRCGV D + S+ WQ K + Y
Sbjct: 228 MQKFFGLKVTGTLDPKTVEVMEKPRCGVYDVGQYST---------VAKSSAWQKKDLTYR 380
Query: 136 IKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGD 195
I N TP + A+ AI+RAF VW +VTPLTF + Y E+ DI I F +G H D
Sbjct: 381 ILNFTPDLPQADVETAIQRAFKVWSDVTPLTFTRI-YNEVS------DIEISFTAGDHKD 539
Query: 196 SSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLE 255
+SPFDG GG LAHA+ PG GIGGD HFD DE WT + + +LFLVA HE GH+LGL
Sbjct: 540 NSPFDGSGGILAHAFQPGNGIGGDAHFDEDETWTKTSEIY---NLFLVAAHEFGHSLGLS 710
Query: 256 HSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPA 315
HS D A+M P Y + F+LP DD+ IQ +YG + P
Sbjct: 711 HSTDQGALMYPTYSNTDPKTFQLPQDDINAIQYLYGKSS---------------NPVQPT 845
Query: 316 XXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGN--FNTLVILRREMFVFKDQWFWRVRNN 373
+ P+ CD N FN + +R E+ F ++ WR ++
Sbjct: 846 G----------------------PSTPSRCDPNVVFNAVTTMRGELIFFVKRFLWR-KHP 956
Query: 374 RVMDGYPMQITYFWRGLPPSIDAVYENS-EGNFVFFKSNKFWVFKDTTLQPGYPHDLITL 432
+ + M + FW LP +IDA YEN + FK +K+ + GYP ++ +L
Sbjct: 957 QASEAELMFVQAFWPSLPTNIDAAYENPITEQILVFKGSKYTALDGFDVVQGYPRNIYSL 1136
Query: 433 GSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQG 491
G ID+A+ E +GKTYFF +YW Y E+ + MD G+PK I+ + GIP+
Sbjct: 1137GFPKTVKRIDAAVHIEQLGKTYFFAAKKYWSYDEDKKQMDKGFPKQISNDFPGIPDKIDA 1316
Query: 492 AFVHKENGFTYFIKEKS----TGNSTKMLRVEPGYPRSILKDFMGC--DGP 536
AF ++ G YF +S NS ++++V ++GC DGP
Sbjct: 1317AFYYR--GRLYFFIGRSQFEYNINSKRIVQVLRS------NSWLGC**DGP 1445
>emb|X66402.1|MMSTLY M.musculus mRNA for stromelysin 1
Length = 1740
Score = 268 bits (686), Expect = 9e-70
Identities = 179/502 (35%), Positives = 240/502 (47%), Gaps = 16/502 (3%)
Frame = +1
Query: 23 LQTCVWILCATVCKAEQYFN-----------VEVWLQKYGYLPPTDPRMSVLRSAETMQS 71
L +W LC VC + + ++ +L+ Y L + + + +
Sbjct: 34 LPVLLW-LCVVVCSSYPLHDSARDDDAGMELLQKYLENYYGLAKDVKQFIKKKDSSLIVK 210
Query: 72 AIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKH 131
I MQ+F G+ MTGK+D NT++ M KPRCGVPD G S F KW+ H
Sbjct: 211 KIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPD-VGGFSTFP--------GSPKWRKSH 363
Query: 132 IAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASG 191
I Y I N TP + AI +A VW+ VTPLTF + + + DI I FA G
Sbjct: 364 ITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSRI-------SEGEADIMISFAVG 522
Query: 192 FHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHA 251
HGD PFDG G LAHAY PGPGI GD HFD DE WT + G +LFLVA HELGH+
Sbjct: 523 EHGDFVPFDGPGTVLAHAYAPGPGINGDAHFDDDERWT---EDVTGTNLFLVAAHELGHS 693
Query: 252 LGLEHSNDPTAIMAPFYQ-YMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHR 310
LGL HS A+M P Y+ + F L DD+ GIQ +YG
Sbjct: 694 LGLYHSAKAEALMYPVYKSSTDLSRFHLSQDDVDGIQSLYGTPTASPDVLV--------- 846
Query: 311 SIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGN--FNTLVILRREMFVFKDQWFW 368
+P P P +C F+ + LR E+ FKD+ FW
Sbjct: 847 -VPTKSNSLE-----------------PETSP-MCSSTLFFDAVSTLRGEVLFFKDRHFW 969
Query: 369 RVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVF-FKSNKFWVFKDTTLQPGYPH 427
R ++ R + I+ FW LP ++DA YE + + VF FK N+FW + GYP
Sbjct: 970 R-KSLRTPEPEFYLISSFWPSLPSNMDAAYEVTNRDTVFIFKGNQFWAIRGHEELAGYPK 1146
Query: 428 DLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIP 486
+ TLG ID+AI ++ KTYFF D+YWR+ E+ +SM+PG+P+ I + G+
Sbjct: 1147SIHTLGLPATVKKIDAAISNKEKRKTYFFVEDKYWRFDEKKQSMEPGFPRKIAEDFPGVD 1326
Query: 487 ESPQGAFVHKENGFTYFIKEKS 508
F + GF YF S
Sbjct: 1327SRVDAVF--EAFGFLYFFSGSS 1386
Score = 56.6 bits (135), Expect = 7e-06
Identities = 45/142 (31%), Positives = 71/142 (49%), Gaps = 6/142 (4%)
Frame = +1
Query: 403 GNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYW 462
G +FFK FW T +P + + + + +PS+ +D+A + + FKG+++W
Sbjct: 934 GEVLFFKDRHFWRKSLRTPEPEF-YLISSFWPSLPSN-MDAAYEVTNRDTVFIFKGNQFW 1107
Query: 463 --RYGEEMRSMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYF-IKEKSTGNSTKML 516
R EE+ GYPK I G+P + + A +KE TYF +++K K
Sbjct: 1108 AIRGHEELA----GYPKSIHTL-GLPATVKKIDAAISNKEKRKTYFFVEDKYWRFDEKKQ 1272
Query: 517 RVEPGYPRSILKDFMGCDGPTD 538
+EPG+PR I +DF G D D
Sbjct: 1273 SMEPGFPRKIAEDFPGVDSRVD 1338
>ref|NM_010809.1| Mus musculus matrix metalloproteinase 3 (Mmp3), mRNA
Length = 1858
Score = 268 bits (686), Expect = 9e-70
Identities = 179/502 (35%), Positives = 240/502 (47%), Gaps = 16/502 (3%)
Frame = +2
Query: 23 LQTCVWILCATVCKAEQYFN-----------VEVWLQKYGYLPPTDPRMSVLRSAETMQS 71
L +W LC VC + + ++ +L+ Y L + + + +
Sbjct: 92 LPVLLW-LCVVVCSSYPLHDSARDDDAGMELLQKYLENYYGLAKDVKQFIKKKDSSLIVK 268
Query: 72 AIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKH 131
I MQ+F G+ MTGK+D NT++ M KPRCGVPD G S F KW+ H
Sbjct: 269 KIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPD-VGGFSTFP--------GSPKWRKSH 421
Query: 132 IAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASG 191
I Y I N TP + AI +A VW+ VTPLTF + + + DI I FA G
Sbjct: 422 ITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSRI-------SEGEADIMISFAVG 580
Query: 192 FHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHA 251
HGD PFDG G LAHAY PGPGI GD HFD DE WT + G +LFLVA HELGH+
Sbjct: 581 EHGDFVPFDGPGTVLAHAYAPGPGINGDAHFDDDERWT---EDVTGTNLFLVAAHELGHS 751
Query: 252 LGLEHSNDPTAIMAPFYQ-YMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHR 310
LGL HS A+M P Y+ + F L DD+ GIQ +YG
Sbjct: 752 LGLYHSAKAEALMYPVYKSSTDLSRFHLSQDDVDGIQSLYGTPTASPDVLV--------- 904
Query: 311 SIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGN--FNTLVILRREMFVFKDQWFW 368
+P P P +C F+ + LR E+ FKD+ FW
Sbjct: 905 -VPTKSNSLE-----------------PETSP-MCSSTLFFDAVSTLRGEVLFFKDRHFW 1027
Query: 369 RVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVF-FKSNKFWVFKDTTLQPGYPH 427
R ++ R + I+ FW LP ++DA YE + + VF FK N+FW + GYP
Sbjct: 1028R-KSLRTPEPEFYLISSFWPSLPSNMDAAYEVTNRDTVFIFKGNQFWAIRGHEELAGYPK 1204
Query: 428 DLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIP 486
+ TLG ID+AI ++ KTYFF D+YWR+ E+ +SM+PG+P+ I + G+
Sbjct: 1205SIHTLGLPATVKKIDAAISNKEKRKTYFFVEDKYWRFDEKKQSMEPGFPRKIAEDFPGVD 1384
Query: 487 ESPQGAFVHKENGFTYFIKEKS 508
F + GF YF S
Sbjct: 1385SRVDAVF--EAFGFLYFFSGSS 1444
Score = 56.6 bits (135), Expect = 7e-06
Identities = 45/142 (31%), Positives = 71/142 (49%), Gaps = 6/142 (4%)
Frame = +2
Query: 403 GNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYW 462
G +FFK FW T +P + + + + +PS+ +D+A + + FKG+++W
Sbjct: 992 GEVLFFKDRHFWRKSLRTPEPEF-YLISSFWPSLPSN-MDAAYEVTNRDTVFIFKGNQFW 1165
Query: 463 --RYGEEMRSMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYF-IKEKSTGNSTKML 516
R EE+ GYPK I G+P + + A +KE TYF +++K K
Sbjct: 1166 AIRGHEELA----GYPKSIHTL-GLPATVKKIDAAISNKEKRKTYFFVEDKYWRFDEKKQ 1330
Query: 517 RVEPGYPRSILKDFMGCDGPTD 538
+EPG+PR I +DF G D D
Sbjct: 1331 SMEPGFPRKIAEDFPGVDSRVD 1396
>emb|X63162.1|MMTRANS1 M.musculus mRNA for transin-1
Length = 1858
Score = 268 bits (686), Expect = 9e-70
Identities = 179/502 (35%), Positives = 240/502 (47%), Gaps = 16/502 (3%)
Frame = +2
Query: 23 LQTCVWILCATVCKAEQYFN-----------VEVWLQKYGYLPPTDPRMSVLRSAETMQS 71
L +W LC VC + + ++ +L+ Y L + + + +
Sbjct: 92 LPVLLW-LCVVVCSSYPLHDSARDDDAGMELLQKYLENYYGLAKDVKQFIKKKDSSLIVK 268
Query: 72 AIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKH 131
I MQ+F G+ MTGK+D NT++ M KPRCGVPD G S F KW+ H
Sbjct: 269 KIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPD-VGGFSTFP--------GSPKWRKSH 421
Query: 132 IAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASG 191
I Y I N TP + AI +A VW+ VTPLTF + + + DI I FA G
Sbjct: 422 ITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSRI-------SEGEADIMISFAVG 580
Query: 192 FHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHA 251
HGD PFDG G LAHAY PGPGI GD HFD DE WT + G +LFLVA HELGH+
Sbjct: 581 EHGDFVPFDGPGTVLAHAYAPGPGINGDAHFDDDERWT---EDVTGTNLFLVAAHELGHS 751
Query: 252 LGLEHSNDPTAIMAPFYQ-YMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHR 310
LGL HS A+M P Y+ + F L DD+ GIQ +YG
Sbjct: 752 LGLYHSAKAEALMYPVYKSSTDLSRFHLSQDDVDGIQSLYGTPTASPDVLV--------- 904
Query: 311 SIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGN--FNTLVILRREMFVFKDQWFW 368
+P P P +C F+ + LR E+ FKD+ FW
Sbjct: 905 -VPTKSNSLE-----------------PETSP-MCSSTLFFDAVSTLRGEVLFFKDRHFW 1027
Query: 369 RVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVF-FKSNKFWVFKDTTLQPGYPH 427
R ++ R + I+ FW LP ++DA YE + + VF FK N+FW + GYP
Sbjct: 1028R-KSLRTPEPEFYLISSFWPSLPSNMDAAYEVTNRDTVFIFKGNQFWAIRGHEELAGYPK 1204
Query: 428 DLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIP 486
+ TLG ID+AI ++ KTYFF D+YWR+ E+ +SM+PG+P+ I + G+
Sbjct: 1205SIHTLGLPATVKKIDAAISNKEKRKTYFFVEDKYWRFDEKKQSMEPGFPRKIAEDFPGVD 1384
Query: 487 ESPQGAFVHKENGFTYFIKEKS 508
F + GF YF S
Sbjct: 1385SRVDAVF--EAFGFLYFFSGSS 1444
Score = 56.6 bits (135), Expect = 7e-06
Identities = 45/142 (31%), Positives = 71/142 (49%), Gaps = 6/142 (4%)
Frame = +2
Query: 403 GNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYW 462
G +FFK FW T +P + + + + +PS+ +D+A + + FKG+++W
Sbjct: 992 GEVLFFKDRHFWRKSLRTPEPEF-YLISSFWPSLPSN-MDAAYEVTNRDTVFIFKGNQFW 1165
Query: 463 --RYGEEMRSMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYF-IKEKSTGNSTKML 516
R EE+ GYPK I G+P + + A +KE TYF +++K K
Sbjct: 1166 AIRGHEELA----GYPKSIHTL-GLPATVKKIDAAISNKEKRKTYFFVEDKYWRFDEKKQ 1330
Query: 517 RVEPGYPRSILKDFMGCDGPTD 538
+EPG+PR I +DF G D D
Sbjct: 1331 SMEPGFPRKIAEDFPGVDSRVD 1396
>gb|AF072685.1|AF072685 Bos taurus matrix metalloproteinase 13 (MMP13) mRNA, complete cds
Length = 1516
Score = 268 bits (684), Expect = 2e-69
Identities = 168/472 (35%), Positives = 234/472 (48%), Gaps = 6/472 (1%)
Frame = +1
Query: 38 EQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMK 97
E + E +L+ Y Y P + +A ++ + MQ F+G+ +TG++D NT+D MK
Sbjct: 100 EDFQFAESYLKSY-YYPQNPAGILKKTAASSVIDRLREMQSFFGLEVTGRLDDNTLDIMK 276
Query: 98 KPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFD 157
KPRCGVPD ++N+ + KW ++ Y I N TP + +E KA R+AF
Sbjct: 277 KPRCGVPDV----GEYNVFPRTL-----KWSKMNLTYRIVNYTPDLTHSEVEKAFRKAFK 429
Query: 158 VWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 217
VW +VTPL F + NG DI I F + HGD PFDG G LAHA+ PGP G
Sbjct: 430 VWSDVTPLNFTRI-----HNGT--ADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYG 588
Query: 218 GDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFK 277
GD HFD DE WT + G +LFLVA HE GH+LGL+HS DP A+M P Y Y +F
Sbjct: 589 GDAHFDDDETWTSSSK---GYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFM 759
Query: 278 LPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSY 337
LP+DD+QGIQ +YG S
Sbjct: 760 LPDDDVQGIQSLYG-------------------------------------PGDEDPYSK 828
Query: 338 PGAKPNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID 395
P+ CD + + + LR E +FKD++FWR+ +V + F LP ID
Sbjct: 829 HPKTPDKCDPSLSLDAITSLRGETLIFKDRFFWRLHPQQV-EAELFLTKSFGPELPNRID 1005
Query: 396 AVYENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSH--GIDSAIWWEDVGK 452
A YE+ + +F F+ KFW + YP + L G P H I +A+ +ED GK
Sbjct: 1006AAYEHPSHDLIFIFRGRKFWALSGYDILEDYPKKISEL--GFPKHVKKISAALHFEDSGK 1179
Query: 453 TYFFKGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYF 503
T FF ++ W Y + MD YP+ I ++ GI + V+++NG+ YF
Sbjct: 1180TLFFSENQVWSYDDTNHVMDKDYPRLIEEVFPGIGDKVDA--VYQKNGYIYF 1329
>gb|AF144760.1|AF144760 Bos taurus MT3-MMP protein (MMP-16) mRNA, partial cds
Length = 416
Score = 268 bits (684), Expect = 2e-69
Identities = 126/137 (91%), Positives = 131/137 (94%)
Frame = +2
Query: 18 SRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQ 77
S +L+LQT +WILCATVC EQYFNVEVWLQKYGYLPP+DPRMSVLRSAETMQSA+AAMQ
Sbjct: 5 SGILYLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPSDPRMSVLRSAETMQSALAAMQ 184
Query: 78 QFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIK 137
QFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHI YSIK
Sbjct: 185 QFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIK 364
Query: 138 NVTPKVGDAETRKAIRR 154
NVTPKVGD ETRKAIRR
Sbjct: 365 NVTPKVGDPETRKAIRR 415
>gb|BC002591.1|BC002591 Homo sapiens, matrix metalloproteinase 10 (stromelysin 2), clone
MGC:1704 IMAGE:3140935, mRNA, complete cds
Length = 1773
Score = 266 bits (681), Expect = 3e-69
Identities = 186/518 (35%), Positives = 254/518 (48%), Gaps = 18/518 (3%)
Frame = +1
Query: 9 GSRLDFVSQSRVLFLQTCVWILCATVCKA--------EQYFNVEV---WLQKYGYLPPTD 57
G+R V R++ L V +LC VC A E+ N ++ +L+KY Y D
Sbjct: 1 GTRTKKVRAVRMMHLAFLV-LLCLPVCSAYPLSGAAKEEDSNKDLAQQYLEKY-YNLEKD 174
Query: 58 PRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRR 117
+ + + + I MQ+F G+ +TGK+D +T++ M+KPRCGVPD SS +
Sbjct: 175 VKQFRRKDSNLIVKKIQGMQKFLGLEVTGKLDTDTLEVMRKPRCGVPDVGHFSSFPGM-- 348
Query: 118 KRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELEN 177
KW+ H+ Y I N TP + AI +A VW+ VTPLTF +
Sbjct: 349 -------PKWRKTHLTYRIVNYTPDLPRDAVDSAIEKALKVWEEVTPLTFSRLY------ 489
Query: 178 GKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDG 237
+ + DI I FA HGD FDG G LAHAY PGPG+ GD HFD DE WT + G
Sbjct: 490 -EGEADIMISFAVKEHGDFYSFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWT---EDASG 657
Query: 238 NDLFLVAVHELGHALGLEHSNDPTAIMAPFY-QYMETDNFKLPNDDLQGIQKIYGXXXXX 296
+LFLVA HELGH+LGL HS + A+M P Y + E F+L DD+ GIQ +YG
Sbjct: 658 TNLFLVAAHELGHSLGLFHSANTEALMYPLYNSFTELAQFRLSQDDVNGIQSLYGP---- 825
Query: 297 XXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK--PNICDG--NFNTL 352
PPA S P P CD +F+ +
Sbjct: 826 ----------------PPA----------STEEPLVPTKSVPSGSEMPAKCDPALSFDAI 927
Query: 353 VILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE-NSEGNFVFFKSN 411
LR E FKD++FWR R++ + I+ FW LP +DA YE NS FK N
Sbjct: 928 STLRGEYLFFKDRYFWR-RSHWNPEPEFHLISAFWPSLPSYLDAAYEVNSRDTVFIFKGN 1104
Query: 412 KFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSM 471
+FW + +Q GYP + TLG ID+A+ ++ KTYFF D+YWR+ E +SM
Sbjct: 1105EFWAIRGNEVQAGYPRGIHTLGFPPTIRKIDAAVSDKEKKKTYFFAADKYWRFDENSQSM 1284
Query: 472 DPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKEKS 508
+ G+P+ I + G+ P+ V + GF YF S
Sbjct: 1285EQGFPRLIADDFPGV--EPKVDAVLQAFGFFYFFSGSS 1392
>gb|AF062392.1|AF062392 Gallus gallus matrix metalloproteinase mRNA, complete cds
Length = 1587
Score = 265 bits (678), Expect = 8e-69
Identities = 171/488 (35%), Positives = 232/488 (47%), Gaps = 4/488 (0%)
Frame = +3
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
VE +L K+ + + +AE + MQ+F+G+ +TGK D T++ MKKPRCG
Sbjct: 162 VEDYLSKFYTIETDSNQRGWKANAEFTAEKLQKMQRFFGLKVTGKPDTETLEMMKKPRCG 341
Query: 103 VPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNV 162
VPD Y +T W+ ++ Y I N TP + KAI++AF V
Sbjct: 342 VPDVGL-----------YGVTLPGWKKNNLTYRIVNYTPDLSKEVVDKAIQKAFKARSTV 488
Query: 163 TPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSP-FDGEGGFLAHAYFPGPGIGGDTH 221
TPL F + + DI + F + HG FDG G LAHA+ PG G GGD H
Sbjct: 489 TPLIFARIQ-------EGIADIMVAFGTKAHGHCPRYFDGPLGVLAHAFPPGSGFGGDVH 647
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FD DE WT+G+ DG +LFLVA HE+GHALGL H ND A M P Y Y+ F L D
Sbjct: 648 FDEDEDWTMGS---DGFNLFLVAAHEVGHALGLSHPNDQRAFMFPNYAYISPSEFPLSPD 818
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK 341
D+ GIQ IYG ++P
Sbjct: 819 DISGIQSIYG---------SATKTPGKRPTVP--------------------------TS 893
Query: 342 PNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
PN C +F+ + LRRE+ K + WRV + + I+ FW LP I A YE
Sbjct: 894 PNTCGPQISFDAVTTLRREVIFLKGRHLWRVYPDNSEVELEL-ISAFWPFLPSGIQAAYE 1070
Query: 400 NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGD 459
N + +FFK N FWV + GYP ++ TLG ID+A+ ++ GKT FF GD
Sbjct: 1071NMKDRILFFKGNNFWVVSGYKVLLGYPKNINTLGFPKGVKKIDAAVCNKNTGKTDFFVGD 1250
Query: 460 RYWRYGEEMRSMDPGYP-KPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKMLRV 518
+YWRY E +SM+ GYP + + + GI + F HK G YF + ++ L+
Sbjct: 1251KYWRYDESTQSMEKGYPRRTVNDFPGISQRIDAVFQHK--GLFYFF------HGSRQLKF 1406
Query: 519 EPGYPRSI 526
+P R I
Sbjct: 1407DPTAKRVI 1430
>ref|XM_058069.2| Homo sapiens matrix metalloproteinase 12 (macrophage elastase)
(MMP12), mRNA
Length = 1779
Score = 145 bits (366), Expect(2) = 8e-69
Identities = 88/268 (32%), Positives = 136/268 (49%), Gaps = 4/268 (1%)
Frame = +3
Query: 240 LFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXX 299
LFL AVHE+GH+LGL HS+DP A+M P Y+Y++ + F+L DD++GIQ +YG
Sbjct: 645 LFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDPKE---- 812
Query: 300 XXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGN--FNTLVILRR 357
++ +P + ++P +CD N F+ + +
Sbjct: 813 ---------NQRLP----------------------NPDNSEPALCDPNLSFDAVTTVGN 899
Query: 358 EMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVF-FKSNKFWVF 416
++F FKD++FW + R + I+ W LP I+A YE N VF FK +K+W+
Sbjct: 900 KIFFFKDRFFWLKVSERPKTSVNL-ISSLWPTLPSGIEAAYEIEARNQVFLFKDDKYWLI 1076
Query: 417 KDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYP 476
+ +P YP + + G ID+A++ +TYFF ++YWRY E + MDPGYP
Sbjct: 1077SNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDNQYWRYDERRQMMDPGYP 1256
Query: 477 KPIT-IWKGIPESPQGAFVHKENGFTYF 503
K IT ++GI F K + +F
Sbjct: 1257KLITKNFQGIGPKIDAVFYSKNKYYYFF 1340
Score = 142 bits (357), Expect(2) = 8e-69
Identities = 78/187 (41%), Positives = 101/187 (53%), Gaps = 1/187 (0%)
Frame = +1
Query: 44 EVWLQK-YGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
E +L+K YG P + S M+ I MQ F G+ +TG++D +T++ M PRCG
Sbjct: 112 ERYLEKFYGLEINKLPVTKMKYSGNLMKEKIQEMQHFLGLKVTGQLDTSTLEMMHAPRCG 291
Query: 103 VPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNV 162
VPD + R G W+ +I Y I N TP + + AIR+AF VW NV
Sbjct: 292 VPD---------VHHFREMPGGPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNV 444
Query: 163 TPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPL F ++ DI ++FA G HGD FDG+GG LAHA+ PG GIGGD HF
Sbjct: 445 TPLKFSKI-------NTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHF 603
Query: 223 DSDEPWT 229
D DE WT
Sbjct: 604 DEDEFWT 624
Score = 40.0 bits (92), Expect = 0.67
Identities = 22/57 (38%), Positives = 32/57 (55%), Gaps = 3/57 (5%)
Frame = +3
Query: 360 FVFKDQWFWRVRNNRVM--DGYPMQITYFWRGLPPSIDAVYENSEGNFVFFK-SNKF 413
+ F D +WR R M GYP IT ++G+ P IDAV+ + + FF+ SN+F
Sbjct: 1188 YFFVDNQYWRYDERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQGSNQF 1358
>ref|XM_040728.1| Homo sapiens matrix metalloproteinase 10 (stromelysin 2) (MMP10),
mRNA
Length = 1743
Score = 264 bits (675), Expect = 2e-68
Identities = 180/498 (36%), Positives = 245/498 (49%), Gaps = 18/498 (3%)
Frame = +2
Query: 29 ILCATVCKA--------EQYFNVEV---WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQ 77
+LC VC A E+ N ++ +L+KY Y D + + + + I MQ
Sbjct: 47 LLCLPVCSAYPLSGAAKEEDSNKDLAQQYLEKY-YNLEKDVKQFRRKDSNLIVKKIQGMQ 223
Query: 78 QFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIK 137
+F G+ +TGK+D +T++ M+KPRCGVPD SS + KW+ H+ Y I
Sbjct: 224 KFLGLEVTGKLDTDTLEVMRKPRCGVPDVGHFSSFPGM---------PKWRKTHLTYRIV 376
Query: 138 NVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSS 197
N TP + AI +A VW+ VTPLTF + + + DI I FA HGD
Sbjct: 377 NYTPDLPRDAVDSAIEKALKVWEEVTPLTFSRLY-------EGEADIMISFAVKEHGDFY 535
Query: 198 PFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHS 257
FDG G LAHAY PGPG+ GD HFD DE WT + G +LFLVA HELGH+LGL HS
Sbjct: 536 SFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWT---EDASGTNLFLVAAHELGHSLGLFHS 706
Query: 258 NDPTAIMAPFY-QYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAX 316
+ A+M P Y + E F+L DD+ GIQ +YG PPA
Sbjct: 707 ANTEALMYPLYNSFTELAQFRLSQDDVNGIQSLYGP--------------------PPA- 823
Query: 317 XXXXXXXXXXXXXXXXXXXSYPGAK--PNICDG--NFNTLVILRREMFVFKDQWFWRVRN 372
S P P CD +F+ + LR E FKD++FWR R+
Sbjct: 824 ---------STEEPLVPTKSVPSGSEMPAKCDPALSFDAISTLRGEYLFFKDRYFWR-RS 973
Query: 373 NRVMDGYPMQITYFWRGLPPSIDAVYE-NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLIT 431
+ + I+ FW LP +DA YE NS FK N+FW + +Q GYP + T
Sbjct: 974 HWNPEPEFHLISAFWPSLPSYLDAAYEVNSRDTVFIFKGNEFWAIRGNEVQAGYPRGIHT 1153
Query: 432 LGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQ 490
LG ID+A+ ++ KTYFF D+YWR+ E +SM+ G+P+ I + G+ P+
Sbjct: 1154LGFPPTIRKIDAAVSDKEKKKTYFFAADKYWRFDENSQSMEQGFPRLIADDFPGV--EPK 1327
Query: 491 GAFVHKENGFTYFIKEKS 508
V + GF YF S
Sbjct: 1328VDAVLQAFGFFYFFSGSS 1381
>ref|NM_002425.1| Homo sapiens matrix metalloproteinase 10 (stromelysin 2) (MMP10),
mRNA
Length = 1743
Score = 264 bits (675), Expect = 2e-68
Identities = 180/498 (36%), Positives = 245/498 (49%), Gaps = 18/498 (3%)
Frame = +2
Query: 29 ILCATVCKA--------EQYFNVEV---WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQ 77
+LC VC A E+ N ++ +L+KY Y D + + + + I MQ
Sbjct: 47 LLCLPVCSAYPLSGAAKEEDSNKDLAQQYLEKY-YNLEKDVKQFRRKDSNLIVKKIQGMQ 223
Query: 78 QFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIK 137
+F G+ +TGK+D +T++ M+KPRCGVPD SS + KW+ H+ Y I
Sbjct: 224 KFLGLEVTGKLDTDTLEVMRKPRCGVPDVGHFSSFPGM---------PKWRKTHLTYRIV 376
Query: 138 NVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSS 197
N TP + AI +A VW+ VTPLTF + + + DI I FA HGD
Sbjct: 377 NYTPDLPRDAVDSAIEKALKVWEEVTPLTFSRLY-------EGEADIMISFAVKEHGDFY 535
Query: 198 PFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHS 257
FDG G LAHAY PGPG+ GD HFD DE WT + G +LFLVA HELGH+LGL HS
Sbjct: 536 SFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWT---EDASGTNLFLVAAHELGHSLGLFHS 706
Query: 258 NDPTAIMAPFY-QYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAX 316
+ A+M P Y + E F+L DD+ GIQ +YG PPA
Sbjct: 707 ANTEALMYPLYNSFTELAQFRLSQDDVNGIQSLYGP--------------------PPA- 823
Query: 317 XXXXXXXXXXXXXXXXXXXSYPGAK--PNICDG--NFNTLVILRREMFVFKDQWFWRVRN 372
S P P CD +F+ + LR E FKD++FWR R+
Sbjct: 824 ---------STEEPLVPTKSVPSGSEMPAKCDPALSFDAISTLRGEYLFFKDRYFWR-RS 973
Query: 373 NRVMDGYPMQITYFWRGLPPSIDAVYE-NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLIT 431
+ + I+ FW LP +DA YE NS FK N+FW + +Q GYP + T
Sbjct: 974 HWNPEPEFHLISAFWPSLPSYLDAAYEVNSRDTVFIFKGNEFWAIRGNEVQAGYPRGIHT 1153
Query: 432 LGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQ 490
LG ID+A+ ++ KTYFF D+YWR+ E +SM+ G+P+ I + G+ P+
Sbjct: 1154LGFPPTIRKIDAAVSDKEKKKTYFFAADKYWRFDENSQSMEQGFPRLIADDFPGV--EPK 1327
Query: 491 GAFVHKENGFTYFIKEKS 508
V + GF YF S
Sbjct: 1328VDAVLQAFGFFYFFSGSS 1381
>emb|X07820.1|HSSTROM2 Human mRNA for metalloproteinase stromelysin-2
Length = 1743
Score = 264 bits (675), Expect = 2e-68
Identities = 180/498 (36%), Positives = 245/498 (49%), Gaps = 18/498 (3%)
Frame = +2
Query: 29 ILCATVCKA--------EQYFNVEV---WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQ 77
+LC VC A E+ N ++ +L+KY Y D + + + + I MQ
Sbjct: 47 LLCLPVCSAYPLSGAAKEEDSNKDLAQQYLEKY-YNLEKDVKQFRRKDSNLIVKKIQGMQ 223
Query: 78 QFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIK 137
+F G+ +TGK+D +T++ M+KPRCGVPD SS + KW+ H+ Y I
Sbjct: 224 KFLGLEVTGKLDTDTLEVMRKPRCGVPDVGHFSSFPGM---------PKWRKTHLTYRIV 376
Query: 138 NVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSS 197
N TP + AI +A VW+ VTPLTF + + + DI I FA HGD
Sbjct: 377 NYTPDLPRDAVDSAIEKALKVWEEVTPLTFSRLY-------EGEADIMISFAVKEHGDFY 535
Query: 198 PFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHS 257
FDG G LAHAY PGPG+ GD HFD DE WT + G +LFLVA HELGH+LGL HS
Sbjct: 536 SFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWT---EDASGTNLFLVAAHELGHSLGLFHS 706
Query: 258 NDPTAIMAPFY-QYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAX 316
+ A+M P Y + E F+L DD+ GIQ +YG PPA
Sbjct: 707 ANTEALMYPLYNSFTELAQFRLSQDDVNGIQSLYGP--------------------PPA- 823
Query: 317 XXXXXXXXXXXXXXXXXXXSYPGAK--PNICDG--NFNTLVILRREMFVFKDQWFWRVRN 372
S P P CD +F+ + LR E FKD++FWR R+
Sbjct: 824 ---------STEEPLVPTKSVPSGSEMPAKCDPALSFDAISTLRGEYLFFKDRYFWR-RS 973
Query: 373 NRVMDGYPMQITYFWRGLPPSIDAVYE-NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLIT 431
+ + I+ FW LP +DA YE NS FK N+FW + +Q GYP + T
Sbjct: 974 HWNPEPEFHLISAFWPSLPSYLDAAYEVNSRDTVFIFKGNEFWAIRGNEVQAGYPRGIHT 1153
Query: 432 LGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQ 490
LG ID+A+ ++ KTYFF D+YWR+ E +SM+ G+P+ I + G+ P+
Sbjct: 1154LGFPPTIRKIDAAVSDKEKKKTYFFAADKYWRFDENSQSMEQGFPRLIADDFPGV--EPK 1327
Query: 491 GAFVHKENGFTYFIKEKS 508
V + GF YF S
Sbjct: 1328VDAVLQAFGFFYFFSGSS 1381
>emb|X58256.1|BTCLG Bovine CLG mRNA for collagenase
Length = 2025
Score = 263 bits (672), Expect = 4e-68
Identities = 168/469 (35%), Positives = 237/469 (49%), Gaps = 8/469 (1%)
Frame = +3
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+ Y L ++ R+ + + MQ+F+G+ +TGK D T++ MK+PRCG
Sbjct: 111 VKKYLENYYNLNSNGKKVERQRNGGLITEKLKQMQKFFGLRVTGKPDAETLNVMKQPRCG 290
Query: 103 VPDQTRGSSKFNIRRKRYALTGQK--WQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
VPD + LT K W++ ++ Y I+N TP + A+ +AI +AF +W
Sbjct: 291 VPDVAP-----------FVLTPGKSCWENTNLTYRIENYTPDLSRADVDQAIEKAFQLWS 437
Query: 161 NVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
NVTPLTF +V + DI I F G H D+SPFDG GG LAHA+ PG GIGGD
Sbjct: 438 NVTPLTFTKV-------SEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGAGIGGDA 596
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT N +L+ VA HE GH+LGL HS D A+M P Y + + + +L
Sbjct: 597 HFDDDEWWT---SNFQDYNLYRVAAHEFGHSLGLAHSTDIGALMYPSYTF--SGDVQLSQ 761
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ IYG + + P
Sbjct: 762 DDIDGIQAIYGPSQNPT------------QPVGPQT------------------------ 833
Query: 341 KPNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAV 397
P +CD F+ + +R E+ FKD+++ +R N + + I+ FW LP + A
Sbjct: 834 -PEVCDSKLTFDAITTIRGEVMFFKDRFY--MRTNPLYPEVELNFISVFWPQLPNGLQAA 1004
Query: 398 YENSEGNFV-FFKSNKFWVFKDTTLQPGYPHDLI-TLGSGIPSHGIDSAIWWEDVGKTYF 455
YE ++ + V FFK NK+W K + GYP D+ + G ID+A+ ED GKTYF
Sbjct: 1005YEVADRDEVRFFKGNKYWAVKGQDVLRGYPRDIYRSFGFPRTVKSIDAAVSEEDTGKTYF 1184
Query: 456 FKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYF 503
F ++ WRY E +SMD GYPK I + GI F ++ GF YF
Sbjct: 1185FVANKCWRYDEYKQSMDAGYPKMIAEDFPGIGNKVDAVF--QKGGFFYF 1325
>ref|NM_008607.1| Mus musculus matrix metalloproteinase 13 (Mmp13), mRNA
Length = 2660
Score = 262 bits (669), Expect = 8e-68
Identities = 167/489 (34%), Positives = 239/489 (48%), Gaps = 12/489 (2%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+ Y Y P T + + + + MQ F+G+ +TGK+D T+D M+KPRCGV
Sbjct: 131 EHYLKSY-YHPATLAGILKKSTVTSTVDRLREMQSFFGLEVTGKLDDPTLDIMRKPRCGV 307
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVT 163
PD ++N+ + KW ++ Y I N TP + +E KA R+AF VW +VT
Sbjct: 308 PDV----GEYNVFPRTL-----KWSQTNLTYRIVNYTPDMSHSEVEKAFRKAFKVWSDVT 460
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PL F + DI I F + HGD PFDG G LAHA+ PGP GGD HFD
Sbjct: 461 PLNFTRIY-------DGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFD 619
Query: 224 SDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDL 283
DE WT + G +LF+VA HELGH+LGL+HS DP A+M P Y Y +F LP+DD+
Sbjct: 620 DDETWTSSSK---GYNLFIVAAHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDV 790
Query: 284 QGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK-- 341
QGIQ +YG P K
Sbjct: 791 QGIQFLYGPGDED-----------------------------------------PNPKHP 847
Query: 342 --PNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 397
P CD + + + LR E +FKD++FWR+ +V + FW LP +DA
Sbjct: 848 KTPEKCDPALSLDAITSLRGETMIFKDRFFWRLHPQQV-EAELFLTKSFWPELPNHVDAA 1024
Query: 398 YENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YE+ + +F F+ KFW + GYP + LG + +A+ +E+ GKT FF
Sbjct: 1025YEHPSRDLMFIFRGRKFWALNGYDILEGYPRKISDLGFPKEVKRLSAAVHFENTGKTLFF 1204
Query: 457 KGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYF----IKEKSTGN 511
+ W Y + ++MD YP+ I + GI V+++NG+ YF I+ + +
Sbjct: 1205SENHVWSYDDVNQTMDKDYPRLIEEEFPGIGNKVDA--VYEKNGYIYFFNGPIQFEYSIW 1378
Query: 512 STKMLRVEP 520
S +++RV P
Sbjct: 1379SNRIVRVMP 1405
>emb|X66473.1|MMPCOLLAG M.musculus mRNA for (pro)collagenase
Length = 2660
Score = 262 bits (669), Expect = 8e-68
Identities = 167/489 (34%), Positives = 239/489 (48%), Gaps = 12/489 (2%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+ Y Y P T + + + + MQ F+G+ +TGK+D T+D M+KPRCGV
Sbjct: 131 EHYLKSY-YHPATLAGILKKSTVTSTVDRLREMQSFFGLEVTGKLDDPTLDIMRKPRCGV 307
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVT 163
PD ++N+ + KW ++ Y I N TP + +E KA R+AF VW +VT
Sbjct: 308 PDV----GEYNVFPRTL-----KWSQTNLTYRIVNYTPDMSHSEVEKAFRKAFKVWSDVT 460
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PL F + DI I F + HGD PFDG G LAHA+ PGP GGD HFD
Sbjct: 461 PLNFTRIY-------DGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFD 619
Query: 224 SDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDL 283
DE WT + G +LF+VA HELGH+LGL+HS DP A+M P Y Y +F LP+DD+
Sbjct: 620 DDETWTSSSK---GYNLFIVAAHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDV 790
Query: 284 QGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK-- 341
QGIQ +YG P K
Sbjct: 791 QGIQFLYGPGDED-----------------------------------------PNPKHP 847
Query: 342 --PNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 397
P CD + + + LR E +FKD++FWR+ +V + FW LP +DA
Sbjct: 848 KTPEKCDPALSLDAITSLRGETMIFKDRFFWRLHPQQV-EAELFLTKSFWPELPNHVDAA 1024
Query: 398 YENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YE+ + +F F+ KFW + GYP + LG + +A+ +E+ GKT FF
Sbjct: 1025YEHPSRDLMFIFRGRKFWALNGYDILEGYPRKISDLGFPKEVKRLSAAVHFENTGKTLFF 1204
Query: 457 KGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYF----IKEKSTGN 511
+ W Y + ++MD YP+ I + GI V+++NG+ YF I+ + +
Sbjct: 1205SENHVWSYDDVNQTMDKDYPRLIEEEFPGIGNKVDA--VYEKNGYIYFFNGPIQFEYSIW 1378
Query: 512 STKMLRVEP 520
S +++RV P
Sbjct: 1379SNRIVRVMP 1405
>gb|AF009922.1|AF009922 Bos taurus enamel metalloproteinase precursor mRNA, complete cds
Length = 2123
Score = 262 bits (669), Expect = 8e-68
Identities = 159/444 (35%), Positives = 223/444 (49%), Gaps = 6/444 (1%)
Frame = +2
Query: 40 YFNVEVWLQKYGYLPPTDPRMS--VLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMK 97
Y + +L KY Y P++ V R + I +Q+F+G+ +TGK+DR T+D +K
Sbjct: 110 YRLAQAYLDKY-YTKKGGPQIGEMVARGGNSTVKKIKELQEFFGLRVTGKLDRATMDVIK 286
Query: 98 KPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFD 157
+PRCGVPD + R KW+ + Y I TP + AE +A+ A
Sbjct: 287 RPRCGVPD---------VANYRLFPGEPKWKKNTLTYRISKYTPSMTPAEVDRAMEMALR 439
Query: 158 VWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 217
W + PL F + + DI I F +G HGDS PFDG G LAHA+ PG G+G
Sbjct: 440 AWSSAVPLNFVRI-------NAGEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLG 598
Query: 218 GDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFK 277
GDTHFD+ E WT+G +G +LF VA HE GHALGL HS DP+A+M P Y+Y F+
Sbjct: 599 GDTHFDNAEKWTMGT---NGFNLFTVAAHEFGHALGLAHSTDPSALMFPTYKYQNPYGFR 769
Query: 278 LPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSY 337
LP DD++GIQ +YG + SI
Sbjct: 770 LPKDDVKGIQALYGPRRAFSGKPTAPHGPPHNPSI------------------------- 874
Query: 338 PGAKPNICDGN--FNTLVILRREMFVFKDQWFWRVRNNRVMDGY-PMQITYFWRGLPPSI 394
P++CD N F+ + +L +E+ +F+D+ FWR R +M G P IT + L ++
Sbjct: 875 ----PDLCDSNLSFDAVTMLGKELLLFRDRIFWR-RQVHLMSGIRPSTITSSFPQLMSNV 1039
Query: 395 DAVYENSE-GNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKT 453
DA YE +E G FFK +W+ + +Q G P + G ID+A++ +D KT
Sbjct: 1040DAAYEVAERGTAYFFKGPHYWITRGFQMQ-GPPRTIYDFGFPRYVQRIDAAVYLKDAQKT 1216
Query: 454 YFFKGDRYWRYGEEMRSMDPGYPK 477
FF GD Y+ Y E R M+ YPK
Sbjct: 1217LFFVGDEYYSYDERKRKMEKDYPK 1288
>ref|XM_009873.3| Homo sapiens matrix metalloproteinase 11 (stromelysin 3) (MMP11),
mRNA
Length = 2247
Score = 261 bits (667), Expect = 1e-67
Identities = 150/445 (33%), Positives = 222/445 (49%), Gaps = 2/445 (0%)
Frame = +1
Query: 96 MKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRA 155
++ PRCGVPD + G S N R+KR+ L+G +W+ + Y I ++ + R+ + A
Sbjct: 232 LRPPRCGVPDPSDGLSARN-RQKRFVLSGGRWEKTDLTYRILRFPWQLVQEQVRQTMAEA 408
Query: 156 FDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG 215
VW +VTPLTF EV G+ DI I FA +HGD PFDG GG LAHA+FP
Sbjct: 409 LKVWSDVTPLTFTEV-----HEGR--ADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTH 567
Query: 216 IGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN 275
GD HFD DE WT+G + G DL VA HE GH LGL+H+ A+M+ FY +
Sbjct: 568 REGDVHFDYDETWTIG--DDQGTDLLQVAAHEFGHVLGLQHTTAAKALMSAFYTFRYP-- 735
Query: 276 FKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXX 335
L DD +G+Q +YG + P
Sbjct: 736 LSLSPDDCRGVQHLYG------------------QPWPTVTSRTPALGPQAGIDTNEIAP 861
Query: 336 SYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID 395
P A P+ C+ +F+ + +R E+F FK + WR+R ++ GYP + W+GLP +D
Sbjct: 862 LEPDAPPDACEASFDAVSTIRGELFFFKAGFVWRLRGGQLQPGYPALASRHWQGLPSPVD 1041
Query: 396 AVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLG-SGIPSHGIDSAIWWEDVGKTY 454
A +E+++G+ FF+ ++WV+ G P L LG P H + +W + K Y
Sbjct: 1042AAFEDAQGHIWFFQGAQYWVYDGEKPVLG-PAPLTELGLVRFPVHA--ALVWGPEKNKIY 1212
Query: 455 FFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTK 514
FF+G YWR+ R +D P+ T W+G+P AF +G+ YF++ +
Sbjct: 1213FFRGRDYWRFHPSTRRVDSPVPRRATDWRGVPSEIDAAF-QDADGYAYFLRGRLYWKFDP 1389
Query: 515 M-LRVEPGYPRSILKDFMGCDGPTD 538
+ ++ G+PR + DF GC P +
Sbjct: 1390VKVKALEGFPRLVGPDFFGCAEPAN 1464
>emb|X57766.1|HSSTROL3 Human stromelysin-3 mRNA
Length = 2247
Score = 261 bits (667), Expect = 1e-67
Identities = 150/445 (33%), Positives = 222/445 (49%), Gaps = 2/445 (0%)
Frame = +1
Query: 96 MKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRA 155
++ PRCGVPD + G S N R+KR+ L+G +W+ + Y I ++ + R+ + A
Sbjct: 232 LRPPRCGVPDPSDGLSARN-RQKRFVLSGGRWEKTDLTYRILRFPWQLVQEQVRQTMAEA 408
Query: 156 FDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG 215
VW +VTPLTF EV G+ DI I FA +HGD PFDG GG LAHA+FP
Sbjct: 409 LKVWSDVTPLTFTEV-----HEGR--ADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTH 567
Query: 216 IGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN 275
GD HFD DE WT+G + G DL VA HE GH LGL+H+ A+M+ FY +
Sbjct: 568 REGDVHFDYDETWTIG--DDQGTDLLQVAAHEFGHVLGLQHTTAAKALMSAFYTFRYP-- 735
Query: 276 FKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXX 335
L DD +G+Q +YG + P
Sbjct: 736 LSLSPDDCRGVQHLYG------------------QPWPTVTSRTPALGPQAGIDTNEIAP 861
Query: 336 SYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID 395
P A P+ C+ +F+ + +R E+F FK + WR+R ++ GYP + W+GLP +D
Sbjct: 862 LEPDAPPDACEASFDAVSTIRGELFFFKAGFVWRLRGGQLQPGYPALASRHWQGLPSPVD 1041
Query: 396 AVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLG-SGIPSHGIDSAIWWEDVGKTY 454
A +E+++G+ FF+ ++WV+ G P L LG P H + +W + K Y
Sbjct: 1042AAFEDAQGHIWFFQGAQYWVYDGEKPVLG-PAPLTELGLVRFPVHA--ALVWGPEKNKIY 1212
Query: 455 FFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTK 514
FF+G YWR+ R +D P+ T W+G+P AF +G+ YF++ +
Sbjct: 1213FFRGRDYWRFHPSTRRVDSPVPRRATDWRGVPSEIDAAF-QDADGYAYFLRGRLYWKFDP 1389
Query: 515 M-LRVEPGYPRSILKDFMGCDGPTD 538
+ ++ G+PR + DF GC P +
Sbjct: 1390VKVKALEGFPRLVGPDFFGCAEPAN 1464
>ref|NM_005940.2| Homo sapiens matrix metalloproteinase 11 (stromelysin 3) (MMP11),
mRNA
Length = 2260
Score = 261 bits (667), Expect = 1e-67
Identities = 150/445 (33%), Positives = 222/445 (49%), Gaps = 2/445 (0%)
Frame = +2
Query: 96 MKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRA 155
++ PRCGVPD + G S N R+KR+ L+G +W+ + Y I ++ + R+ + A
Sbjct: 245 LRPPRCGVPDPSDGLSARN-RQKRFVLSGGRWEKTDLTYRILRFPWQLVQEQVRQTMAEA 421
Query: 156 FDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG 215
VW +VTPLTF EV G+ DI I FA +HGD PFDG GG LAHA+FP
Sbjct: 422 LKVWSDVTPLTFTEV-----HEGR--ADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTH 580
Query: 216 IGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN 275
GD HFD DE WT+G + G DL VA HE GH LGL+H+ A+M+ FY +
Sbjct: 581 REGDVHFDYDETWTIG--DDQGTDLLQVAAHEFGHVLGLQHTTAAKALMSAFYTFRYP-- 748
Query: 276 FKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXX 335
L DD +G+Q +YG + P
Sbjct: 749 LSLSPDDCRGVQHLYG------------------QPWPTVTSRTPALGPQAGIDTNEIAP 874
Query: 336 SYPGAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID 395
P A P+ C+ +F+ + +R E+F FK + WR+R ++ GYP + W+GLP +D
Sbjct: 875 LEPDAPPDACEASFDAVSTIRGELFFFKAGFVWRLRGGQLQPGYPALASRHWQGLPSPVD 1054
Query: 396 AVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLG-SGIPSHGIDSAIWWEDVGKTY 454
A +E+++G+ FF+ ++WV+ G P L LG P H + +W + K Y
Sbjct: 1055AAFEDAQGHIWFFQGAQYWVYDGEKPVLG-PAPLTELGLVRFPVHA--ALVWGPEKNKIY 1225
Query: 455 FFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTK 514
FF+G YWR+ R +D P+ T W+G+P AF +G+ YF++ +
Sbjct: 1226FFRGRDYWRFHPSTRRVDSPVPRRATDWRGVPSEIDAAF-QDADGYAYFLRGRLYWKFDP 1402
Query: 515 M-LRVEPGYPRSILKDFMGCDGPTD 538
+ ++ G+PR + DF GC P +
Sbjct: 1403VKVKALEGFPRLVGPDFFGCAEPAN 1477
>emb|X02601.1|RNURFR1 Rat mRNA for 53 kD polypeptide induced by growth factors (EGF) and
oncogenes (H-ras; src; polyoma middle T)
Length = 1771
Score = 260 bits (664), Expect = 3e-67
Identities = 182/501 (36%), Positives = 240/501 (47%), Gaps = 15/501 (2%)
Frame = +1
Query: 23 LQTCVWILCATVCKA------EQYFNVEV---WLQKYGYLPPTDPRMSVLRSAETMQSAI 73
L +W LC VC + E+ +EV +L+ Y L + + + + + I
Sbjct: 67 LPVLLW-LCTAVCSSYPLHGSEEDAGMEVLQKYLENYYGLEKDVKQFTKKKDSSPVVKKI 243
Query: 74 AAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIA 133
MQ+F G+ MTGK+D NT++ M KPRCGVPD G S F KW+ HI+
Sbjct: 244 QEMQKFLGLKMTGKLDSNTMELMHKPRCGVPD-VGGFSTFP--------GSPKWRKNHIS 396
Query: 134 YSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFH 193
Y I N T + AI RA VW+ VTPLTF + + + DI I FA H
Sbjct: 397 YRIVNYTLDLPRESVDSAIERALKVWEEVTPLTFSRI-------SEGEADIMISFAVEEH 555
Query: 194 GDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALG 253
GD PFDG G LAHAY PGPG GD HFD DE WT + G +LFLVA HELGH+LG
Sbjct: 556 GDFIPFDGPGMVLAHAYAPGPGTNGDAHFDDDERWT---DDVTGTNLFLVAAHELGHSLG 726
Query: 254 LEHSNDPTAIMAPFYQYMETD--NFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRS 311
L HS + A+M P Y+ TD F L DD+ GIQ +YG
Sbjct: 727 LFHSANAEALMYPVYK-SSTDLARFHLSQDDVDGIQSLYG-------------------- 843
Query: 312 IPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDG--NFNTLVILRREMFVFKDQWFWR 369
PP P P +C +F+ + LR E+ FKD+ FWR
Sbjct: 844 -PPTESPDVLVVPTKSNSLD------PETLP-MCSSALSFDAVSTLRGEVLFFKDRHFWR 999
Query: 370 VRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVF-FKSNKFWVFKDTTLQPGYPHD 428
G+ + I+ FW LP ++DA YE + + VF K N+ W + GYP
Sbjct: 1000KSLRTPEPGFYL-ISSFWPSLPSNMDAAYEVTNRDTVFILKGNQIWAIRGHEELAGYPKS 1176
Query: 429 LITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPE 487
+ TLG ID+AI +D KTYFF D++WR+ E+ +SMDP +P+ I + GI
Sbjct: 1177IHTLGLPETVQKIDAAISLKDQKKTYFFVEDKFWRFDEKKQSMDPEFPRKIAENFPGIGT 1356
Query: 488 SPQGAFVHKENGFTYFIKEKS 508
F + GF YF S
Sbjct: 1357KVDAVF--EAFGFLYFFSGSS 1413
>dbj|D82054.1|D82054 Cynops pyrrhogaster mRNA for stromelysin-1/2-b, complete cds
Length = 1619
Score = 259 bits (662), Expect = 5e-67
Identities = 169/468 (36%), Positives = 231/468 (49%), Gaps = 6/468 (1%)
Frame = +3
Query: 42 NVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
+VE +L+KY Y +D + ++A + I MQ+F G+ +TGKVD NT++ M++PRC
Sbjct: 144 DVEEYLKKY-YGLNSDKTPDLRKAASPLAEKIREMQKFCGLQVTGKVDSNTLEVMQQPRC 320
Query: 102 GVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQN 161
GV D S F R W+ + Y I N TP + A+ AI++AF VW +
Sbjct: 321 GVSD-VAAYSTFPGR--------PAWRTHALTYRILNYTPDMARADVDTAIQKAFKVWSD 473
Query: 162 VTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTH 221
VTPLTF ++ Y DI I F + HGD +PFDG G LAHA+ PG GIGGD H
Sbjct: 474 VTPLTFTQIYY-------GTADIQISFGAREHGDFNPFDGPYGTLAHAFAPGTGIGGDAH 632
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FD DE W+ + G +LFLVA HE GH+LGL HSND A+M P Y Y + F+LP D
Sbjct: 633 FDEDEKWSKVST---GTNLFLVAAHEFGHSLGLSHSNDRNALMFPTYSYTDPARFRLPKD 803
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK 341
D+ GIQ IYG ++ PP A
Sbjct: 804 DINGIQAIYG-----------PSRKPSPQTPPPT----------------------KPAL 884
Query: 342 PNICDG--NFNTLVILRREMFVFKDQWFWR--VRNNRVMDGYPMQITYFWRGLPPSIDAV 397
+ CD ++ + LR E+ F + F R R++ I+ W LP I A
Sbjct: 885 QSYCDPAIRWDAITTLRNEILFFNGRTFLRSMPHTGRIIS---YTISAVWPSLPSGIHAA 1055
Query: 398 YENSEGNFV-FFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YEN + + V FK NK+W K + P YP ++ TLG ID+A++ D KTY+F
Sbjct: 1056YENQQKDQVLLFKGNKYWAMKGYQMLPNYPQNIYTLGLPRTVTRIDAAVYHPDTRKTYYF 1235
Query: 457 KGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYF 503
D+YW + E ++ MD P+ I T + I F K G YF
Sbjct: 1236VNDKYWSFDEALQVMDKDSPQQIVTTFPRIGTKVDAVFYAK--GLLYF 1373
>dbj|AB043536.1|AB043536 Oncorhynchus mykiss mmp mRNA for matrix metalloproteinase, complete
cds
Length = 2104
Score = 258 bits (660), Expect = 9e-67
Identities = 162/441 (36%), Positives = 216/441 (48%), Gaps = 11/441 (2%)
Frame = +2
Query: 73 IAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHI 132
++ MQ+F+G+ +TG +D T+ MKKPRCG+PD G + KW +
Sbjct: 581 VSEMQRFFGLKVTGTLDAETVKMMKKPRCGLPDVQLG--------RFTTFDNLKWPTNQL 736
Query: 133 AYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGF 192
Y I+N TP + AE +I RA VW V+PL F + + DI I F +
Sbjct: 737 TYRIENYTPDMSVAEVDNSIERALQVWAKVSPLRFTRIY-------RGTADIMISFGNRN 895
Query: 193 HGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHAL 252
HGD PFDG G LAHA+ PG IGGD HFD DE +T + G +LFLVA HE GH+L
Sbjct: 896 HGDFYPFDGPEGTLAHAFSPGADIGGDAHFDDDEYFTFSSTR--GYNLFLVAAHEFGHSL 1069
Query: 253 GLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSI 312
GL HSNDP A+M P Y Y E F LP DD+ GIQ IYG + +
Sbjct: 1070GLSHSNDPGALMFPVYSYTEPSTFSLPRDDVTGIQYIYG----------------PNPDV 1201
Query: 313 PPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGN--FNTLVILRREMFVFKDQWFWRV 370
P P + P+ CD + + LR E FK ++FWR+
Sbjct: 1202NP---------------NPDKPDPTPVSTPDACDPTLVLDAVTTLRGEKMFFKGRFFWRI 1336
Query: 371 RNNRVMDGYPMQ-------ITYFWRGLPPSIDAVYENSEGNFVF-FKSNKFWVFKDTTLQ 422
YP I FW LP +I+A YE+ + VF FK ++ W +
Sbjct: 1337--------YPQSSKPHQNLIKTFWPELPDNINAAYESQLSDRVFLFKDHQVWALYGYDIV 1492
Query: 423 PGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPI-TI 481
PGYP +L +LG +D+A++ E KT FF GD Y+ Y EEM+SMD G+PK +
Sbjct: 1493PGYPRNLKSLGLPRTVKKVDAALYDEHSRKTLFFVGDNYYSYDEEMKSMDRGFPKRVDEQ 1672
Query: 482 WKGIPESPQGAFVHKENGFTY 502
+ G+ AF + GFTY
Sbjct: 1673FPGMTSKVTAAF--QVRGFTY 1729
>gb|U54825.1|SSU54825 Sus scrofa matrix metalloproteinase mRNA, complete cds
Length = 3424
Score = 256 bits (654), Expect = 5e-66
Identities = 155/420 (36%), Positives = 212/420 (49%), Gaps = 4/420 (0%)
Frame = +2
Query: 62 VLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYA 121
V + +M I +Q F+G+ +TGK+DR T+D +K+PRCGVPD + R
Sbjct: 194 VAKGGNSMVKKIKELQAFFGLRVTGKLDRTTMDVIKRPRCGVPD---------VANYRLF 346
Query: 122 LTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRD 181
KW+ + Y I TP + AE KA+ A W + PL+F V +
Sbjct: 347 PGEPKWKKNTLTYRISKYTPSMTPAEVDKAMEMALQAWSSAVPLSFVRV-------NAGE 505
Query: 182 VDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLF 241
DI I F +G HGDS PFDG G LAHA+ PG G+GGDTHFD+ E WT+G +G +LF
Sbjct: 506 ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMG---MNGFNLF 676
Query: 242 LVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXX 301
VA HE GHALGL HS DP+A+M P Y+Y F LP DD++GIQ +YG
Sbjct: 677 TVAAHEFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPKDDVKGIQALYGPRKTFTGKPT 856
Query: 302 XXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICD--GNFNTLVILRREM 359
PP + + P+ICD +F+ + +L +E+
Sbjct: 857 VPHG-------PP----------------------HNPSLPDICDSSSSFDAVTMLGKEL 949
Query: 360 FVFKDQWFWRVRNNRVMDGY-PMQITYFWRGLPPSIDAVYENSE-GNFVFFKSNKFWVFK 417
F+D+ FWR R +M G P IT + L ++DA YE ++ G FFK +W+ +
Sbjct: 950 LFFRDRIFWR-RQVHLMSGIRPSTITSSFPQLMSNVDAAYEVADRGMAYFFKGPHYWITR 1126
Query: 418 DTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPK 477
+Q G P + G ID+A+ +D KT FF GD Y+ Y E R MD YPK
Sbjct: 1127GFQMQ-GPPRTIYDFGFPRYVQRIDAAVHLKDTQKTLFFVGDEYYSYDERKRKMDKDYPK 1303
>ref|NM_008606.1| Mus musculus matrix metalloproteinase 11 (Mmp11), mRNA
Length = 2246
Score = 256 bits (654), Expect = 5e-66
Identities = 151/447 (33%), Positives = 221/447 (48%), Gaps = 2/447 (0%)
Frame = +2
Query: 100 RCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVW 159
RCGVPD + N R+KR+ L+G +W+ + Y I ++ + R+ + A VW
Sbjct: 257 RCGVPDLPDVLNARN-RQKRFVLSGGRWEKTDLTYRILRFPWQLVREQVRQTVAEALQVW 433
Query: 160 QNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
VTPLTF EV G+ DI I FA +HGD+ PFDG GG LAHA+FP GD
Sbjct: 434 SEVTPLTFTEV-----HEGR--ADIMIDFARYWHGDNLPFDGPGGILAHAFFPKTHREGD 592
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
HFD DE WT+G ++ G DL VA HE GH LGL+H+ A+M+PFY + L
Sbjct: 593 VHFDYDETWTIG--DNQGTDLLQVAAHEFGHVLGLQHTTAAKALMSPFYTFRYP--LSLS 760
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
DD +GIQ +YG R P
Sbjct: 761 PDDRRGIQHLYG------------------RPQMAPTSPAPTLSSQAGTDTNEIALLEPE 886
Query: 340 AKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
P++C+ +F+ + +R E+F FK + WR+R+ R+ GYP + W+GLP +DA +E
Sbjct: 887 TPPDVCETSFDAVSTIRGELFFFKAGFVWRLRSGRLQPGYPALASRHWQGLPSPVDAAFE 1066
Query: 400 NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLG-SGIPSHGIDSAIWWEDVGKTYFFKG 458
+++G FF+ ++WV+ G P L LG G P H + +W + K YFF+G
Sbjct: 1067DAQGQIWFFQGAQYWVYDGEKPVLG-PAPLSKLGLQGSPVHA--ALVWGPEKNKIYFFRG 1237
Query: 459 DRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKM-LR 517
YWR+ + +D P+ T W+G+P AF E G+ YF++ + ++
Sbjct: 1238GDYWRFHPRTQRVDNPVPRRSTDWRGVPSEIDAAFQDAE-GYAYFLRGHLYWKFDPVKVK 1414
Query: 518 VEPGYPRSILKDFMGCDGPTDRDKDRH 544
V G+PR + DF C P + + +H
Sbjct: 1415VLEGFPRPVGPDFFDCAEPANTFR*QH 1495
>emb|Z12604.1|MMSTRMLY3 M.musculus mRNA for stromelysin-3
Length = 2246
Score = 256 bits (654), Expect = 5e-66
Identities = 151/447 (33%), Positives = 221/447 (48%), Gaps = 2/447 (0%)
Frame = +2
Query: 100 RCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVW 159
RCGVPD + N R+KR+ L+G +W+ + Y I ++ + R+ + A VW
Sbjct: 257 RCGVPDLPDVLNARN-RQKRFVLSGGRWEKTDLTYRILRFPWQLVREQVRQTVAEALQVW 433
Query: 160 QNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
VTPLTF EV G+ DI I FA +HGD+ PFDG GG LAHA+FP GD
Sbjct: 434 SEVTPLTFTEV-----HEGR--ADIMIDFARYWHGDNLPFDGPGGILAHAFFPKTHREGD 592
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
HFD DE WT+G ++ G DL VA HE GH LGL+H+ A+M+PFY + L
Sbjct: 593 VHFDYDETWTIG--DNQGTDLLQVAAHEFGHVLGLQHTTAAKALMSPFYTFRYP--LSLS 760
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
DD +GIQ +YG R P
Sbjct: 761 PDDRRGIQHLYG------------------RPQMAPTSPAPTLSSQAGTDTNEIALLEPE 886
Query: 340 AKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
P++C+ +F+ + +R E+F FK + WR+R+ R+ GYP + W+GLP +DA +E
Sbjct: 887 TPPDVCETSFDAVSTIRGELFFFKAGFVWRLRSGRLQPGYPALASRHWQGLPSPVDAAFE 1066
Query: 400 NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLG-SGIPSHGIDSAIWWEDVGKTYFFKG 458
+++G FF+ ++WV+ G P L LG G P H + +W + K YFF+G
Sbjct: 1067DAQGQIWFFQGAQYWVYDGEKPVLG-PAPLSKLGLQGSPVHA--ALVWGPEKNKIYFFRG 1237
Query: 459 DRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKM-LR 517
YWR+ + +D P+ T W+G+P AF E G+ YF++ + ++
Sbjct: 1238GDYWRFHPRTQRVDNPVPRRSTDWRGVPSEIDAAFQDAE-GYAYFLRGHLYWKFDPVKVK 1414
Query: 518 VEPGYPRSILKDFMGCDGPTDRDKDRH 544
V G+PR + DF C P + + +H
Sbjct: 1415VLEGFPRPVGPDFFDCAEPANTFR*QH 1495
>ref|NM_013903.1| Mus musculus matrix metalloproteinase 20 (enamelysin) (Mmp20), mRNA
Length = 3277
Score = 256 bits (653), Expect = 6e-66
Identities = 166/480 (34%), Positives = 234/480 (48%), Gaps = 10/480 (2%)
Frame = +2
Query: 40 YFNVEVWLQKYGYLPPTDPRMS--VLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMK 97
Y + +L KY Y P+ V R + M I +Q F+G+ +TGK+D+NT++ +K
Sbjct: 131 YHLAQAYLDKY-YTKKGGPQAGEMVARESNPMIRRIKELQIFFGLKVTGKLDQNTMNVIK 307
Query: 98 KPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFD 157
KPRCGVPD + R KW+ + Y I TP + E KAI+ A
Sbjct: 308 KPRCGVPD---------VANYRLFPGEPKWKKNILTYRISKYTPSMSPTEVDKAIQMALH 460
Query: 158 VWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 217
W PL F + + +G + DI I F +G HGDS PFDG G LAHA+ PG G+G
Sbjct: 461 AWSTAVPLNF-----VRINSG--EADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLG 619
Query: 218 GDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFK 277
GDTHFD+ E WT+G +G +LF VA HE GHALGL HS DP+A+M P Y+Y F
Sbjct: 620 GDTHFDNAEKWTMGT---NGFNLFTVAAHEFGHALGLGHSTDPSALMYPTYKYQNPYRFH 790
Query: 278 LPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSY 337
LP DD++GIQ +YG IPP +
Sbjct: 791 LPKDDVKGIQALYGPRKIFPGKPTM-------PHIPP----------------------H 883
Query: 338 PGAKPNICD--GNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID 395
+ P++CD +F+ + +L +E+ FKD+ FWR + + P IT + L ++D
Sbjct: 884 KPSIPDLCDSSSSFDAVTMLGKELLFFKDRIFWRRQVHLPTGIRPSTITSSFPQLMSNVD 1063
Query: 396 AVYENSE-GNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTY 454
A YE +E G FFK +WV + +Q G P + G ID+A++ ++ KT
Sbjct: 1064AAYEVAERGIAFFFKGPHYWVTRGFHMQ-GPPRTIYDFGFPRHVQRIDAAVYLKEPQKTL 1240
Query: 455 FFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKE-----NGFTYFIKEKST 509
FF G+ Y+ Y E + M+ YP K E G H + NG+ YF + T
Sbjct: 1241FFVGEEYYSYDERKKKMEKDYP------KNTEEEFSGVSGHIDAAVELNGYIYFFSGRKT 1402
>gb|AF155933.1|AF155933 Mus musculus matrix metalloproteinase-20 (Mmp20) mRNA, complete cds
Length = 3295
Score = 256 bits (653), Expect = 6e-66
Identities = 166/480 (34%), Positives = 234/480 (48%), Gaps = 10/480 (2%)
Frame = +2
Query: 40 YFNVEVWLQKYGYLPPTDPRMS--VLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMK 97
Y + +L KY Y P+ V R + M I +Q F+G+ +TGK+D+NT++ +K
Sbjct: 131 YHLAQAYLDKY-YTKKGGPQAGEMVARESNPMIRRIKELQIFFGLKVTGKLDQNTMNVIK 307
Query: 98 KPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFD 157
KPRCGVPD + R KW+ + Y I TP + E KAI+ A
Sbjct: 308 KPRCGVPD---------VANYRLFPGEPKWKKNILTYRISKYTPSMSPTEVDKAIQMALH 460
Query: 158 VWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 217
W PL F + + +G + DI I F +G HGDS PFDG G LAHA+ PG G+G
Sbjct: 461 AWSTAVPLNF-----VRINSG--EADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLG 619
Query: 218 GDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFK 277
GDTHFD+ E WT+G +G +LF VA HE GHALGL HS DP+A+M P Y+Y F
Sbjct: 620 GDTHFDNAEKWTMGT---NGFNLFTVAAHEFGHALGLGHSTDPSALMYPTYKYQNPYRFH 790
Query: 278 LPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSY 337
LP DD++GIQ +YG IPP +
Sbjct: 791 LPKDDVKGIQALYGPRKIFPGKPTM-------PHIPP----------------------H 883
Query: 338 PGAKPNICD--GNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID 395
+ P++CD +F+ + +L +E+ FKD+ FWR + + P IT + L ++D
Sbjct: 884 KPSIPDLCDSSSSFDAVTMLGKELLFFKDRIFWRRQVHLPTGIRPSTITSSFPQLMSNVD 1063
Query: 396 AVYENSE-GNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTY 454
A YE +E G FFK +WV + +Q G P + G ID+A++ ++ KT
Sbjct: 1064AAYEVAERGIAFFFKGPHYWVTRGFHMQ-GPPRTIYDFGFPRHVQRIDAAVYLKEPQKTL 1240
Query: 455 FFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKE-----NGFTYFIKEKST 509
FF G+ Y+ Y E + M+ YP K E G H + NG+ YF + T
Sbjct: 1241FFVGEEYYSYDERKKKMEKDYP------KNTEEEFSGVSGHIDAAVELNGYIYFFSGRKT 1402
>gb|AF281673.1|AF281673 Tupaia belangeri matrix metalloproteinase-27 mRNA, complete cds
Length = 1667
Score = 255 bits (652), Expect = 8e-66
Identities = 164/447 (36%), Positives = 218/447 (48%), Gaps = 5/447 (1%)
Frame = +1
Query: 64 RSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALT 123
++ + I MQ F+G+ +TG +D NT++ MK PRCGVPD + + Y L
Sbjct: 253 KNGSLLDGKIREMQAFFGLTVTGTLDSNTLEIMKTPRCGVPD---------VGQYGYTLP 405
Query: 124 GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVD 183
G W+ ++ Y I N TP + A+ +AI++A +VW VTPLTF ++ K D
Sbjct: 406 G--WRKYNLTYRIMNYTPDMARADVDEAIQKALEVWSKVTPLTFTKI-------FKGIAD 558
Query: 184 ITIIFASGFHGDSSP-FDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFL 242
I I F + HG FDG G L HA+ PG G+GGDTHFD DE WT G LFL
Sbjct: 559 IMIAFRTRVHGRCPRYFDGPLGVLGHAFPPGLGLGGDTHFDEDENWTKDTA---GFSLFL 729
Query: 243 VAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXX 302
VA HE GHALGL HSND TA+M P Y ++ + L DD+ GIQ IYG
Sbjct: 730 VAAHEFGHALGLSHSNDQTALMFPNYVSLDPSKYPLSQDDIDGIQSIYG----------- 876
Query: 303 XXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK-PNICDGN--FNTLVILRREM 359
+P G K P+ CD + F+ + +RRE+
Sbjct: 877 --------GLP------------------TTPSKPKGPKIPHACDPDLTFDAITNIRREV 978
Query: 360 FVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDT 419
FK + WR+ ++ + D I FW LP + A YEN + FK FW+
Sbjct: 979 MFFKGRHLWRIYHD-ITDVEFELIASFWPSLPADLQAAYENPRDKILVFKDENFWMIGAY 1155
Query: 420 TLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPI 479
+ P YP + LG ID+A+ +D KTYFF G WRY E R+MD GYP+ I
Sbjct: 1156NVLPRYPRSIHILGFPRYVKKIDAAVCDQDTRKTYFFVGIWCWRYDEMTRTMDRGYPQRI 1335
Query: 480 T-IWKGIPESPQGAFVHKENGFTYFIK 505
+ GI AF HK GF YF +
Sbjct: 1336VRHFPGIGLRVDAAFQHK--GFFYFFR 1410
>emb|Y12779.1|HSENAMELY H.sapiens mRNA for enamelysin
Length = 1674
Score = 255 bits (652), Expect = 8e-66
Identities = 157/452 (34%), Positives = 223/452 (48%), Gaps = 4/452 (0%)
Frame = +2
Query: 62 VLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYA 121
V R + +M I +Q F+G+ +TGK+D+ T++ +KKPRCGVPD + R
Sbjct: 194 VARGSNSMIRKIKELQAFFGLQVTGKLDQTTMNVIKKPRCGVPD---------VANYRLF 346
Query: 122 LTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRD 181
KW+ + Y I TP + E KA+ A W + PL+F + + +G +
Sbjct: 347 PGEPKWKKNTLTYRISKYTPSMSSVEVDKAVEMALQAWSSAVPLSF-----VRINSG--E 505
Query: 182 VDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLF 241
DI I F +G HGDS PFDG G LAHA+ PG G+GGDTHFD+ E WT+G +G +LF
Sbjct: 506 ADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNPEKWTMGT---NGFNLF 676
Query: 242 LVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXX 301
VA HE GHALGL HS DP+A+M P Y+Y F LP DD++GIQ +YG
Sbjct: 677 TVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYGFHLPKDDVKGIQALYGPRKVFLGKPT 856
Query: 302 XXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICD--GNFNTLVILRREM 359
SI P++CD +F+ + +L +E+
Sbjct: 857 LPHAPHHKPSI-----------------------------PDLCDSSSSFDAVTMLGKEL 949
Query: 360 FVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSE-GNFVFFKSNKFWVFKD 418
+FKD+ FWR + + P IT + L ++DA YE +E G FFK +W+ +
Sbjct: 950 LLFKDRIFWRRQVHLRTGIRPSTITSSFPQLMSNVDAAYEVAERGTAYFFKGPHYWITRG 1129
Query: 419 TTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKP 478
+Q G P + G ID+A++ + KT FF GD Y+ Y E R M+ YPK
Sbjct: 1130FQMQ-GPPRTIYDFGFPRHVQQIDAAVYLREPQKTLFFVGDEYYSYDERKRKMEKDYPKN 1306
Query: 479 I-TIWKGIPESPQGAFVHKENGFTYFIKEKST 509
+ G+ A + NG+ YF T
Sbjct: 1307TEEEFSGVNGQIDAAV--ELNGYIYFFSGPKT 1396
>ref|NM_004771.2| Homo sapiens matrix metalloproteinase 20 (enamelysin) (MMP20), mRNA
Length = 1958
Score = 255 bits (652), Expect = 8e-66
Identities = 157/452 (34%), Positives = 223/452 (48%), Gaps = 4/452 (0%)
Frame = +2
Query: 62 VLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYA 121
V R + +M I +Q F+G+ +TGK+D+ T++ +KKPRCGVPD + R
Sbjct: 194 VARGSNSMIRKIKELQAFFGLQVTGKLDQTTMNVIKKPRCGVPD---------VANYRLF 346
Query: 122 LTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRD 181
KW+ + Y I TP + E KA+ A W + PL+F + + +G +
Sbjct: 347 PGEPKWKKNTLTYRISKYTPSMSSVEVDKAVEMALQAWSSAVPLSF-----VRINSG--E 505
Query: 182 VDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLF 241
DI I F +G HGDS PFDG G LAHA+ PG G+GGDTHFD+ E WT+G +G +LF
Sbjct: 506 ADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNPEKWTMGT---NGFNLF 676
Query: 242 LVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXX 301
VA HE GHALGL HS DP+A+M P Y+Y F LP DD++GIQ +YG
Sbjct: 677 TVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYGFHLPKDDVKGIQALYGPRKVFLGKPT 856
Query: 302 XXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICD--GNFNTLVILRREM 359
SI P++CD +F+ + +L +E+
Sbjct: 857 LPHAPHHKPSI-----------------------------PDLCDSSSSFDAVTMLGKEL 949
Query: 360 FVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSE-GNFVFFKSNKFWVFKD 418
+FKD+ FWR + + P IT + L ++DA YE +E G FFK +W+ +
Sbjct: 950 LLFKDRIFWRRQVHLRTGIRPSTITSSFPQLMSNVDAAYEVAERGTAYFFKGPHYWITRG 1129
Query: 419 TTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKP 478
+Q G P + G ID+A++ + KT FF GD Y+ Y E R M+ YPK
Sbjct: 1130FQMQ-GPPRTIYDFGFPRHVQQIDAAVYLREPQKTLFFVGDEYYSYDERKRKMEKDYPKN 1306
Query: 479 I-TIWKGIPESPQGAFVHKENGFTYFIKEKST 509
+ G+ A + NG+ YF T
Sbjct: 1307TEEEFSGVNGQIDAAV--ELNGYIYFFSGPKT 1396
>gb|U62529.1|ECU62529 Equus caballus matrix metalloproteinase 3 mRNA, complete cds
Length = 1804
Score = 255 bits (651), Expect = 1e-65
Identities = 173/496 (34%), Positives = 240/496 (47%), Gaps = 16/496 (3%)
Frame = +2
Query: 29 ILCATVCKA--------EQYFNVEV---WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQ 77
+LC C A ++ N+++ +L+KY L + + + + I MQ
Sbjct: 77 LLCVAACSAYPLDRSARDEDSNMDLLQDYLEKYYDLGKEMRQYVRRKDSGPIVKKIQEMQ 256
Query: 78 QFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIK 137
+F G+ +TGK+D +T++ M K RCGVPD ++ + KW H+ Y I
Sbjct: 257 KFLGLKVTGKLDSDTVEVMHKSRCGVPDVGHFTTFPGM---------PKWSKTHLTYRIV 409
Query: 138 NVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSS 197
N T + + +A +W+ VTPLTF + + + DI I FA HGD
Sbjct: 410 NYTQDLPRDAVDSDVEKALKIWEEVTPLTFSRIY-------EGEADIMITFAVREHGDFF 568
Query: 198 PFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHS 257
PFDG G LAHAY PGPG+ GD HFD DE WT + G + LVA HELGH+LGL HS
Sbjct: 569 PFDGPGKVLAHAYPPGPGMNGDAHFDDDEHWT---KDASGINFLLVAAHELGHSLGLYHS 739
Query: 258 NDPTAIMAPFYQYME-TDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAX 316
+ A+M P Y ++ +L DD+ GIQ +YG PPA
Sbjct: 740 TNTEALMYPLYNTLKGPARVRLSQDDVTGIQSLYGPPPASPDSPVEPS-----EPEPPA- 901
Query: 317 XXXXXXXXXXXXXXXXXXXSYPGAKPNICDG--NFNTLVILRREMFVFKDQWFWRVRNNR 374
PG +CD +F+ + LR E+ FKD++FWR + R
Sbjct: 902 ---------------------PGTLA-MCDPALSFDAISTLRGEILFFKDRYFWR-KTFR 1012
Query: 375 VMDGYPMQITYFWRGLPPSIDAVYENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLG 433
+ I+ FW LP IDA YE + + VF FK NKFW + Q GYP + TLG
Sbjct: 1013TLVPEFHPISSFWPSLPSGIDAAYEVTSRDSVFIFKGNKFWAIRGNEEQAGYPRGIHTLG 1192
Query: 434 SGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGA 492
ID+AI+ ++ KTYFF D+YWR+ E+ +SM+PGYPK I + GI A
Sbjct: 1193FPPTVRKIDAAIFDKEKQKTYFFVEDKYWRFDEKRQSMEPGYPKQIAEDFPGIDSKLDAA 1372
Query: 493 FVHKENGFTYFIKEKS 508
F + GF YF S
Sbjct: 1373F--ESFGFFYFFSGSS 1414
Score = 63.5 bits (153), Expect = 6e-08
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
Frame = +2
Query: 393 SIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGK 452
S DA+ G +FFK FW TL P + H + + +PS GID+A
Sbjct: 935 SFDAI-STLRGEILFFKDRYFWRKTFRTLVPEF-HPISSFWPSLPS-GIDAAYEVTSRDS 1105
Query: 453 TYFFKGDRYWRY-GEEMRSMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYF-IKEK 507
+ FKG+++W G E ++ GYP+ I G P + + A KE TYF +++K
Sbjct: 1106 VFIFKGNKFWAIRGNEEQA---GYPRGIHTL-GFPPTVRKIDAAIFDKEKQKTYFFVEDK 1273
Query: 508 STGNSTKMLRVEPGYPRSILKDFMGCDGPTD 538
K +EPGYP+ I +DF G D D
Sbjct: 1274 YWRFDEKRQSMEPGYPKQIAEDFPGIDSKLD 1366
>gb|BC019135.1|BC019135 Mus musculus, Similar to matrix metalloproteinase 12, clone
MGC:29351 IMAGE:5037674, mRNA, complete cds
Length = 1822
Score = 254 bits (648), Expect = 2e-65
Identities = 147/436 (33%), Positives = 214/436 (48%), Gaps = 5/436 (1%)
Frame = +3
Query: 50 YGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRG 109
Y Y P + ++ + MQQF+G+ TG++D +T+ M PRCGVPD
Sbjct: 147 YDYGKDRIPMTKTKTNRNFLEEKLQEMQQFFGLEATGQLDNSTLAIMHIPRCGVPD---- 314
Query: 110 SSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEE 169
++ R +W +++ Y I N TP + + ++AF VW +VTPL F +
Sbjct: 315 -----VQHLRAVPQRSRWMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRK 479
Query: 170 VPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWT 229
+ K + DI I+FA G HGD + FDG+GG LAHA++PGPGI GD HFD E WT
Sbjct: 480 LH-------KDEADIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWT 638
Query: 230 LGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKI 289
+ G +LFLVAVHELGH+LGL+HSN+P +IM P Y+Y+ + F+L DD++ IQ +
Sbjct: 639 ---KSFQGTNLFLVAVHELGHSLGLQHSNNPKSIMDPTYRYLNPNTFRLSADDIRNIQSL 809
Query: 290 YGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNF 349
YG S PP+ +F
Sbjct: 810 YG--------APVKTPSLTKPSSPPSTFCHQSL-------------------------SF 890
Query: 350 NTLVILRREMFVFKDQWFWRVRNNRVMDGYP----MQITYFWRGLPPSIDAVYENSEGNF 405
+ + + ++F FKD +FW + G P + I+ W +P I A YE N
Sbjct: 891 DAVTTVGEKIFFFKDWFFW-----WKLPGSPATNIISISSIWPSIPSGIQAAYEIESRNQ 1055
Query: 406 VF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRY 464
+F FK K+W+ + +P YP + +LG +D+A++ K YFF +YWRY
Sbjct: 1056LFLFKDEKYWLINNLVPEPHYPRSIYSLGFSASVKKVDAAVFDPLRQKVYFFVDKQYWRY 1235
Query: 465 GEEMRSMDPGYPKPIT 480
MDP YPK I+
Sbjct: 1236DVRQELMDPAYPKLIS 1283
>dbj|AB028240.1|AB028240 Salmo salar mRNA for matrix metalloproteinase 13, complete cds
Length = 1714
Score = 253 bits (647), Expect = 3e-65
Identities = 168/483 (34%), Positives = 241/483 (49%), Gaps = 8/483 (1%)
Frame = +1
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L++Y Y P + S + I MQ+F+ +N+TGK+D +T++ M+ RCGV
Sbjct: 109 EKYLRRY-YGMPAGLQGKEKTSDVMYKKKIQEMQEFFKLNVTGKLDDDTLELMEMARCGV 285
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVT 163
PD + + KW+ + + I N TP + A+ +A+R +VW +VT
Sbjct: 286 PD---------VAEYNHFPNDLKWKTTEVTFRILNYTPDLRKADVDRAVRNGLNVWSSVT 438
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PL F+++ + + DI I F + HGD +PFDG G LAHAY PG GIGGDTHFD
Sbjct: 439 PLKFKKLY-------EGNADIMISFGAREHGDFNPFDGPDGLLAHAYPPGNGIGGDTHFD 597
Query: 224 SDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDL 283
DE WT H+ N LFLVA HE GHALG+ HS+DP ++M P Y Y + + L DD+
Sbjct: 598 EDETWT--KDFHEFN-LFLVAAHEFGHALGMAHSSDPGSLMYPVYSYGK--GYPLSEDDI 762
Query: 284 QGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPN 343
+GIQ +YG HR I P P A P+
Sbjct: 763 KGIQSLYG-------------ENPNHRRIKPK----------------------PDA-PS 834
Query: 344 ICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 401
CD +F+ + LR E +FKD+++WR+ ++++ + I W +P +DA YEN
Sbjct: 835 KCDPELSFDAVTELRGETIIFKDRFYWRL-HSQIPEPEQTLIKSTWPEIPNKVDAAYENP 1011
Query: 402 EGNFV-FFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDR 460
E + V F K W L GYP + LG ID+A+ D GKT F +
Sbjct: 1012EKDVVIIFSGIKMWALNGYNLVDGYPKYIHKLGLPKTVRKIDAAVNIRDTGKTLLFVEEE 1191
Query: 461 YWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFIKE----KSTGNSTKM 515
YW Y E +MD GYP+ I + GI + A H G+ YF E + + NS K+
Sbjct: 1192YWSYDERTGTMDSGYPRSIEEDFPGIGDEVDAAAYH--FGYLYFYHEHIQFEYSYNSRKV 1365
Query: 516 LRV 518
+R+
Sbjct: 1366MRI 1374
>ref|NM_032006.1| Mus musculus collagenase-like A (Mcola-pending), mRNA
Length = 1525
Score = 253 bits (645), Expect = 5e-65
Identities = 164/445 (36%), Positives = 224/445 (49%), Gaps = 9/445 (2%)
Frame = +2
Query: 67 ETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALT--G 124
E M + MQQ +G+ +TG D T+ MKKPRCGVPD YA+T
Sbjct: 173 EMMAEKLRQMQQLFGLKVTGNSDPETLRAMKKPRCGVPDVAP-----------YAITHNN 319
Query: 125 QKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDI 184
+W H+ YSI N TP + A AI RAF VW +VTPLTF+ V + + DI
Sbjct: 320 PRWTKTHLTYSILNYTPYLPKAVVEDAIARAFRVWSDVTPLTFQRV-------FEEEGDI 478
Query: 185 TIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVA 244
+ F G HGD++PFDG LAH + PGPG+GGD H+D DE WT + N +LF V
Sbjct: 479 VLSFHRGDHGDNNPFDGPNYKLAHTFQPGPGLGGDVHYDLDETWTNSSENF---NLFYVT 649
Query: 245 VHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXX 304
HELGH+LGL HS+D A+M P Y + T++F L DD+ IQ +YG
Sbjct: 650 AHELGHSLGLTHSSDIGALMFPSYTWY-TEDFVLNQDDINRIQDLYG------------- 787
Query: 305 XXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGN--FNTLVILRREMFVF 362
I P P+ C+G+ F+ + R E+F F
Sbjct: 788 --PSPNPIQPTGATT----------------------PHPCNGDLTFDAITTFRGEVFFF 895
Query: 363 KDQWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAVYENSEGNFV-FFKSNKFWVFKDTT 420
K +++ RV NR M + I W LP +DA YE S + V +FK +K W ++ +
Sbjct: 896 KGRFYIRV--NRFMPEPELNLIGILWPNLPVKLDAAYEASMIDQVRYFKGSKVWAVQEQS 1069
Query: 421 LQPGYPHDLITLGSGIPSH--GIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPK- 477
+ G+P D+ + G PS+ ID+A+ E+ GKTYFF YWRY E +SMDPGYP+
Sbjct: 1070VLRGFPRDIHSF-FGFPSNVTHIDAAVCEEETGKTYFFVDHMYWRYDENTQSMDPGYPRL 1246
Query: 478 PITIWKGIPESPQGAFVHKENGFTY 502
+ GI + F EN + +
Sbjct: 1247TAEDFPGIDDKVDDVFQKGENFYFF 1321
>emb|AJ278462.1|MMU278462 Mus musculus mRNA for putative matrix metalloproteinase (McolA
gene)
Length = 1525
Score = 253 bits (645), Expect = 5e-65
Identities = 164/445 (36%), Positives = 224/445 (49%), Gaps = 9/445 (2%)
Frame = +2
Query: 67 ETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALT--G 124
E M + MQQ +G+ +TG D T+ MKKPRCGVPD YA+T
Sbjct: 173 EMMAEKLRQMQQLFGLKVTGNSDPETLRAMKKPRCGVPDVAP-----------YAITHNN 319
Query: 125 QKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDI 184
+W H+ YSI N TP + A AI RAF VW +VTPLTF+ V + + DI
Sbjct: 320 PRWTKTHLTYSILNYTPYLPKAVVEDAIARAFRVWSDVTPLTFQRV-------FEEEGDI 478
Query: 185 TIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVA 244
+ F G HGD++PFDG LAH + PGPG+GGD H+D DE WT + N +LF V
Sbjct: 479 VLSFHRGDHGDNNPFDGPNYKLAHTFQPGPGLGGDVHYDLDETWTNSSENF---NLFYVT 649
Query: 245 VHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXX 304
HELGH+LGL HS+D A+M P Y + T++F L DD+ IQ +YG
Sbjct: 650 AHELGHSLGLTHSSDIGALMFPSYTWY-TEDFVLNQDDINRIQDLYG------------- 787
Query: 305 XXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGN--FNTLVILRREMFVF 362
I P P+ C+G+ F+ + R E+F F
Sbjct: 788 --PSPNPIQPTGATT----------------------PHPCNGDLTFDAITTFRGEVFFF 895
Query: 363 KDQWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAVYENSEGNFV-FFKSNKFWVFKDTT 420
K +++ RV NR M + I W LP +DA YE S + V +FK +K W ++ +
Sbjct: 896 KGRFYIRV--NRFMPEPELNLIGILWPNLPVKLDAAYEASMIDQVRYFKGSKVWAVQEQS 1069
Query: 421 LQPGYPHDLITLGSGIPSH--GIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPK- 477
+ G+P D+ + G PS+ ID+A+ E+ GKTYFF YWRY E +SMDPGYP+
Sbjct: 1070VLRGFPRDIHSF-FGFPSNVTHIDAAVCEEETGKTYFFVDHMYWRYDENTQSMDPGYPRL 1246
Query: 478 PITIWKGIPESPQGAFVHKENGFTY 502
+ GI + F EN + +
Sbjct: 1247TAEDFPGIDDKVDDVFQKGENFYFF 1321
>ref|NM_012980.1| Rattus norvegicus Matrix metalloproteinase 11 (stromelysin 3)
(Mmp11), mRNA
Length = 2236
Score = 250 bits (638), Expect = 3e-64
Identities = 149/447 (33%), Positives = 217/447 (48%), Gaps = 2/447 (0%)
Frame = +1
Query: 100 RCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVW 159
RCGVPD + N R+KR+ L+G +W+ + Y I ++ + R+ + A VW
Sbjct: 262 RCGVPDPPDVLNARN-RQKRFVLSGGRWEKTDLTYRILRFPWQLVREQVRQTVAEALRVW 438
Query: 160 QNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
VTPLTF EV G+ DI I F +HGD+ PFDG GG LAHA+FP GD
Sbjct: 439 SEVTPLTFTEV-----HEGR--ADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGD 597
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
HFD DE WT+G+ G DL VA HE GH LGL+H+ A+M+PFY + L
Sbjct: 598 VHFDYDETWTIGD---KGTDLLQVAAHEFGHVLGLQHTTAAKALMSPFYTFRYP--LSLS 762
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
DD +GIQ +YG R P
Sbjct: 763 PDDRRGIQHLYG------------------RPQLTPTSPTPTLSSQAGTDTNEIALQEPE 888
Query: 340 AKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
P +C+ +F+ + +R E+F FK + WR+R+ ++ GYP + W+GLP +DA +E
Sbjct: 889 VPPEVCETSFDAVSTIRGELFFFKAGFVWRLRSGQLQPGYPALASRHWQGLPSPVDAAFE 1068
Query: 400 NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLG-SGIPSHGIDSAIWWEDVGKTYFFKG 458
+++G FF+ ++WV+ G P L LG G P H + +W + K YFF+G
Sbjct: 1069DAQGQIWFFQGAQYWVYDGEKPVLG-PAPLSKLGLQGSPVHA--ALVWGPEKNKIYFFRG 1239
Query: 459 DRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKM-LR 517
YWR+ + +D P+ T W+G+P AF E G+ YF++ + ++
Sbjct: 1240GDYWRFHPRTQRVDNPVPRRTTDWRGVPSEIDAAFQDAE-GYAYFLRGHLYWKFDPVKVK 1416
Query: 518 VEPGYPRSILKDFMGCDGPTDRDKDRH 544
V +PR I DF C P + + +H
Sbjct: 1417VLESFPRPIGPDFFDCAEPANTFR*QH 1497
>gb|U46034.1|RNU46034 Rattus norvegicus stromelysin 3 mRNA, complete cds
Length = 2236
Score = 250 bits (638), Expect = 3e-64
Identities = 149/447 (33%), Positives = 217/447 (48%), Gaps = 2/447 (0%)
Frame = +1
Query: 100 RCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVW 159
RCGVPD + N R+KR+ L+G +W+ + Y I ++ + R+ + A VW
Sbjct: 262 RCGVPDPPDVLNARN-RQKRFVLSGGRWEKTDLTYRILRFPWQLVREQVRQTVAEALRVW 438
Query: 160 QNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
VTPLTF EV G+ DI I F +HGD+ PFDG GG LAHA+FP GD
Sbjct: 439 SEVTPLTFTEV-----HEGR--ADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGD 597
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
HFD DE WT+G+ G DL VA HE GH LGL+H+ A+M+PFY + L
Sbjct: 598 VHFDYDETWTIGD---KGTDLLQVAAHEFGHVLGLQHTTAAKALMSPFYTFRYP--LSLS 762
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
DD +GIQ +YG R P
Sbjct: 763 PDDRRGIQHLYG------------------RPQLTPTSPTPTLSSQAGTDTNEIALQEPE 888
Query: 340 AKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
P +C+ +F+ + +R E+F FK + WR+R+ ++ GYP + W+GLP +DA +E
Sbjct: 889 VPPEVCETSFDAVSTIRGELFFFKAGFVWRLRSGQLQPGYPALASRHWQGLPSPVDAAFE 1068
Query: 400 NSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLG-SGIPSHGIDSAIWWEDVGKTYFFKG 458
+++G FF+ ++WV+ G P L LG G P H + +W + K YFF+G
Sbjct: 1069DAQGQIWFFQGAQYWVYDGEKPVLG-PAPLSKLGLQGSPVHA--ALVWGPEKNKIYFFRG 1239
Query: 459 DRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKM-LR 517
YWR+ + +D P+ T W+G+P AF E G+ YF++ + ++
Sbjct: 1240GDYWRFHPRTQRVDNPVPRRTTDWRGVPSEIDAAFQDAE-GYAYFLRGHLYWKFDPVKVK 1416
Query: 518 VEPGYPRSILKDFMGCDGPTDRDKDRH 544
V +PR I DF C P + + +H
Sbjct: 1417VLESFPRPIGPDFFDCAEPANTFR*QH 1497
>ref|NM_008605.1| Mus musculus matrix metalloproteinase 12 (Mmp12), mRNA
Length = 1790
Score = 249 bits (635), Expect = 7e-64
Identities = 147/439 (33%), Positives = 215/439 (48%), Gaps = 8/439 (1%)
Frame = +1
Query: 50 YGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRG 109
Y Y P + ++ + MQQF+G+ TG++D +T+ M PRCGVPD
Sbjct: 100 YDYGKDRIPMTKTKTNRNFLKEKLQEMQQFFGLEATGQLDNSTLAIMHIPRCGVPD---- 267
Query: 110 SSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEE 169
++ R +W +++ Y I N TP + + ++AF VW +VTPL F +
Sbjct: 268 -----VQHLRAVPQRSRWMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRK 432
Query: 170 VPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWT 229
+ K + DI I+FA G HGD + FDG+GG LAH ++PGPGI GD HFD E WT
Sbjct: 433 LH-------KDEADIMILFAFGAHGDFNYFDGKGGTLAHVFYPGPGIQGDAHFDEAETWT 591
Query: 230 LGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKI 289
+ G +LFLVAVHELGH+LGL+HSN+P +IM P Y+Y+ F+L DD++ IQ +
Sbjct: 592 ---KSFQGTNLFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSL 762
Query: 290 YGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPN-ICDG- 347
YG PP+ + P + P+ C
Sbjct: 763 YGAPVK-----------------PPS-------------------LTKPSSPPSTFCHQS 834
Query: 348 -NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYP----MQITYFWRGLPPSIDAVYENSE 402
+F+ + + ++ FKD +FW + G P I+ W +P +I A YE
Sbjct: 835 LSFDAVTTVGEKILFFKDWFFW-----WKLPGSPATNITSISSIWPSIPSAIQAAYEIES 999
Query: 403 GNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRY 461
N +F FK K+W+ + +P YP + +LG +D+A++ K YFF Y
Sbjct: 1000RNQLFLFKDEKYWLINNLVPEPHYPRSIYSLGFSASVKKVDAAVFDPLRQKVYFFVDKHY 1179
Query: 462 WRYGEEMRSMDPGYPKPIT 480
WRY MDP YPK I+
Sbjct: 1180WRYDVRQELMDPAYPKLIS 1236
>gb|M82831.1|MUSMETELAS Mus musculus macrophage metalloelastase mRNA, complete cds
Length = 1790
Score = 249 bits (635), Expect = 7e-64
Identities = 147/439 (33%), Positives = 215/439 (48%), Gaps = 8/439 (1%)
Frame = +1
Query: 50 YGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRG 109
Y Y P + ++ + MQQF+G+ TG++D +T+ M PRCGVPD
Sbjct: 100 YDYGKDRIPMTKTKTNRNFLKEKLQEMQQFFGLEATGQLDNSTLAIMHIPRCGVPD---- 267
Query: 110 SSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEE 169
++ R +W +++ Y I N TP + + ++AF VW +VTPL F +
Sbjct: 268 -----VQHLRAVPQRSRWMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRK 432
Query: 170 VPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWT 229
+ K + DI I+FA G HGD + FDG+GG LAH ++PGPGI GD HFD E WT
Sbjct: 433 LH-------KDEADIMILFAFGAHGDFNYFDGKGGTLAHVFYPGPGIQGDAHFDEAETWT 591
Query: 230 LGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKI 289
+ G +LFLVAVHELGH+LGL+HSN+P +IM P Y+Y+ F+L DD++ IQ +
Sbjct: 592 ---KSFQGTNLFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSL 762
Query: 290 YGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPN-ICDG- 347
YG PP+ + P + P+ C
Sbjct: 763 YGAPVK-----------------PPS-------------------LTKPSSPPSTFCHQS 834
Query: 348 -NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYP----MQITYFWRGLPPSIDAVYENSE 402
+F+ + + ++ FKD +FW + G P I+ W +P +I A YE
Sbjct: 835 LSFDAVTTVGEKILFFKDWFFW-----WKLPGSPATNITSISSIWPSIPSAIQAAYEIES 999
Query: 403 GNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRY 461
N +F FK K+W+ + +P YP + +LG +D+A++ K YFF Y
Sbjct: 1000RNQLFLFKDEKYWLINNLVPEPHYPRSIYSLGFSASVKKVDAAVFDPLRQKVYFFVDKHY 1179
Query: 462 WRYGEEMRSMDPGYPKPIT 480
WRY MDP YPK I+
Sbjct: 1180WRYDVRQELMDPAYPKLIS 1236
>ref|NM_053963.1| Rattus norvegicus matrix metalloproteinase 12 (Mmp12), mRNA
Length = 1632
Score = 248 bits (633), Expect = 1e-63
Identities = 146/428 (34%), Positives = 214/428 (49%), Gaps = 5/428 (1%)
Frame = +3
Query: 58 PRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRR 117
P + ++ + MQQF+G+ +TG++D +T+ M RCGVPD ++
Sbjct: 177 PMTKTKTNRNLLEEKLQEMQQFFGLEVTGQLDTSTLKIMHTSRCGVPD---------VQH 329
Query: 118 KRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELEN 177
R +W +++ Y I N TP + A+ ++AF VW +VTPL F ++
Sbjct: 330 LRAVPQRSRWMKRYLTYRIYNYTPDMKRADVDYIFQKAFQVWSDVTPLRFRKIH------ 491
Query: 178 GKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDG 237
K + DITI+FA G HGD FDG+GG LAHA++PGPGI GD HFD E WT + G
Sbjct: 492 -KGEADITILFAFGDHGDFYDFDGKGGTLAHAFYPGPGIQGDAHFDEAETWT---KSFQG 659
Query: 238 NDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXX 297
+LFLVAVHELGH+LGL HSN+P +IM P Y+Y+ + F+L DD+ IQ +YG
Sbjct: 660 TNLFLVAVHELGHSLGLRHSNNPKSIMYPTYRYLHPNTFRLSADDIHSIQSLYG------ 821
Query: 298 XXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPN-ICDG--NFNTLVI 354
+ PG+ P+ +C +F+ +
Sbjct: 822 ------------------------------APVKNPSLTNPGSPPSTVCHQSLSFDAVTT 911
Query: 355 LRREMFVFKDQWF-WRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVF-FKSNK 412
+ ++F FKD +F WR+ + + I+ W +P I A YE N +F FK K
Sbjct: 912 VGDKIFFFKDWFFWWRLPGSPATN--ITSISSMWPTIPSGIQAAYEIGGRNQLFLFKDEK 1085
Query: 413 FWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMD 472
+W+ + +P YP + +LG ID+A++ K YFF +YWRY MD
Sbjct: 1086YWLINNLVPEPHYPRSIHSLGFPASVKKIDAAVFDPLRQKVYFFVDKQYWRYDVRQELMD 1265
Query: 473 PGYPKPIT 480
YPK I+
Sbjct: 1266AAYPKLIS 1289
>emb|X98517.1|RNMME R.norvegicus mRNA for macrophage metalloelastase (MME)
Length = 1632
Score = 248 bits (633), Expect = 1e-63
Identities = 146/428 (34%), Positives = 214/428 (49%), Gaps = 5/428 (1%)
Frame = +3
Query: 58 PRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRR 117
P + ++ + MQQF+G+ +TG++D +T+ M RCGVPD ++
Sbjct: 177 PMTKTKTNRNLLEEKLQEMQQFFGLEVTGQLDTSTLKIMHTSRCGVPD---------VQH 329
Query: 118 KRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELEN 177
R +W +++ Y I N TP + A+ ++AF VW +VTPL F ++
Sbjct: 330 LRAVPQRSRWMKRYLTYRIYNYTPDMKRADVDYIFQKAFQVWSDVTPLRFRKIH------ 491
Query: 178 GKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDG 237
K + DITI+FA G HGD FDG+GG LAHA++PGPGI GD HFD E WT + G
Sbjct: 492 -KGEADITILFAFGDHGDFYDFDGKGGTLAHAFYPGPGIQGDAHFDEAETWT---KSFQG 659
Query: 238 NDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXX 297
+LFLVAVHELGH+LGL HSN+P +IM P Y+Y+ + F+L DD+ IQ +YG
Sbjct: 660 TNLFLVAVHELGHSLGLRHSNNPKSIMYPTYRYLHPNTFRLSADDIHSIQSLYG------ 821
Query: 298 XXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPN-ICDG--NFNTLVI 354
+ PG+ P+ +C +F+ +
Sbjct: 822 ------------------------------APVKNPSLTNPGSPPSTVCHQSLSFDAVTT 911
Query: 355 LRREMFVFKDQWF-WRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVF-FKSNK 412
+ ++F FKD +F WR+ + + I+ W +P I A YE N +F FK K
Sbjct: 912 VGDKIFFFKDWFFWWRLPGSPATN--ITSISSMWPTIPSGIQAAYEIGGRNQLFLFKDEK 1085
Query: 413 FWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMD 472
+W+ + +P YP + +LG ID+A++ K YFF +YWRY MD
Sbjct: 1086YWLINNLVPEPHYPRSIHSLGFPASVKKIDAAVFDPLRQKVYFFVDKQYWRYDVRQELMD 1265
Query: 473 PGYPKPIT 480
YPK I+
Sbjct: 1266AAYPKLIS 1289
>gb|AF070478.1|AF070478 Gallus gallus matrix metalloproteinase-13 (MMP-13) mRNA, partial
cds
Length = 1487
Score = 247 bits (631), Expect = 2e-63
Identities = 156/409 (38%), Positives = 204/409 (49%), Gaps = 4/409 (0%)
Frame = +1
Query: 99 PRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDV 158
PRCGVPD G KF R+ KW + ++ Y I + T + AE +A +RAF V
Sbjct: 1 PRCGVPDV--GEYKFFPRKL-------KWSNTNLTYRIMSYTSDLRRAEVERAFKRAFKV 153
Query: 159 WQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGG 218
W +VTPL F + DI I F + HGD PFDG G LAHA+ PGP GG
Sbjct: 154 WSDVTPLNFTRIR-------SGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPDYGG 312
Query: 219 DTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKL 278
D HFD DE W+ + G +LFLVA HE GH+LGLEHS DP A+M P Y Y F L
Sbjct: 313 DAHFDDDETWS---DDSRGYNLFLVAAHEFGHSLGLEHSRDPGALMFPIYTYTGKSGFVL 483
Query: 279 PNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYP 338
P+DD+QGIQ++YG R P +P
Sbjct: 484 PDDDVQGIQELYG---------------AGDRDPNP---------------------KHP 555
Query: 339 GAKPNIC--DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDA 396
P C D + + + LR EM VFKD++FWR+ + ++++ + I FW LP IDA
Sbjct: 556 -KTPEKCAADLSIDAITKLRGEMLVFKDRFFWRL-HPQMVEAELVLIKSFWPELPNKIDA 729
Query: 397 VYENSEGNFVF-FKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYF 455
YEN + VF FK K W + G+P + +G ID+ + +D GKT F
Sbjct: 730 AYENPIKDLVFMFKGKKVWAMNGYDIVEGFPKKIYEMGFPKEMKKIDAVVHIDDTGKTLF 909
Query: 456 FKGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYF 503
F G++YW Y EE MD GYPK I + GI + V+ NG+ YF
Sbjct: 910 FTGNKYWSYDEETEVMDTGYPKFIEDEFAGIGDRVDA--VYHRNGYLYF 1050
>ref|NM_022122.1| Homo sapiens matrix metalloproteinase 27 (MMP27), mRNA
Length = 1655
Score = 246 bits (628), Expect = 5e-63
Identities = 161/465 (34%), Positives = 222/465 (47%), Gaps = 11/465 (2%)
Frame = +1
Query: 64 RSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALT 123
++ + I MQ F+G+ +TGK+D NT++ MK PRCGVPD + + Y L
Sbjct: 166 KNRSLIDDKIREMQAFFGLTVTGKLDSNTLEIMKTPRCGVPD---------VGQYGYTLP 318
Query: 124 GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVD 183
G W+ ++ Y I N TP + A +AI+ +VW VTPL F ++ K D
Sbjct: 319 G--WRKYNLTYRIINYTPDMARAAVDEAIQEGLEVWSKVTPLKFTKI-------SKGIAD 471
Query: 184 ITIIFASGFHGDSSP-FDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFL 242
I I F + HG FDG G L HA+ PGPG+GGDTHFD DE WT G +LFL
Sbjct: 472 IMIAFRTRVHGRCPRYFDGPLGVLGHAFPPGPGLGGDTHFDEDENWTKDGA---GFNLFL 642
Query: 243 VAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXX 302
VA HE GHALGL HSND TA+M P Y ++ + L DD+ GIQ IYG
Sbjct: 643 VAAHEFGHALGLSHSNDQTALMFPNYVSLDPRKYPLSQDDINGIQSIYGGLPK------- 801
Query: 303 XXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGN--FNTLVILRREMF 360
PA P+ CD + F+ + RRE+
Sbjct: 802 ----------EPAKPKEPTI-------------------PHACDPDLTFDAITTFRREVM 894
Query: 361 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTT 420
FK + WR+ + + D I FW LP + A YEN + FK FW+ +
Sbjct: 895 FFKGRHLWRIYYD-ITDVEFELIASFWPSLPADLQAAYENPRDKILVFKDENFWMIRGYA 1071
Query: 421 LQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYP-KPI 479
+ P YP + TLG ID+A+ + KTYFF G WR+ E ++MD G+P + +
Sbjct: 1072VLPDYPKSIHTLGFPGRVKKIDAAVCDKTTRKTYFFVGIWCWRFDEMTQTMDKGFPQRVV 1251
Query: 480 TIWKGIPESPQGAFVHKENGFTYFIK-------EKSTGNSTKMLR 517
+ GI AF +K GF +F + + T N T+++R
Sbjct: 1252KHFPGISIRVDAAFQYK--GFFFFSRGSKQFEYDIKTKNITRIMR 1380
>gb|AF195192.1|AF195192 Homo sapiens matrix metalloprotease MMP-27 mRNA, complete cds
Length = 1655
Score = 246 bits (628), Expect = 5e-63
Identities = 161/465 (34%), Positives = 222/465 (47%), Gaps = 11/465 (2%)
Frame = +1
Query: 64 RSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALT 123
++ + I MQ F+G+ +TGK+D NT++ MK PRCGVPD + + Y L
Sbjct: 166 KNRSLIDDKIREMQAFFGLTVTGKLDSNTLEIMKTPRCGVPD---------VGQYGYTLP 318
Query: 124 GQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVD 183
G W+ ++ Y I N TP + A +AI+ +VW VTPL F ++ K D
Sbjct: 319 G--WRKYNLTYRIINYTPDMARAAVDEAIQEGLEVWSKVTPLKFTKI-------SKGIAD 471
Query: 184 ITIIFASGFHGDSSP-FDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFL 242
I I F + HG FDG G L HA+ PGPG+GGDTHFD DE WT G +LFL
Sbjct: 472 IMIAFRTRVHGRCPRYFDGPLGVLGHAFPPGPGLGGDTHFDEDENWTKDGA---GFNLFL 642
Query: 243 VAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXX 302
VA HE GHALGL HSND TA+M P Y ++ + L DD+ GIQ IYG
Sbjct: 643 VAAHEFGHALGLSHSNDQTALMFPNYVSLDPRKYPLSQDDINGIQSIYGGLPK------- 801
Query: 303 XXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGN--FNTLVILRREMF 360
PA P+ CD + F+ + RRE+
Sbjct: 802 ----------EPAKPKEPTI-------------------PHACDPDLTFDAITTFRREVM 894
Query: 361 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTT 420
FK + WR+ + + D I FW LP + A YEN + FK FW+ +
Sbjct: 895 FFKGRHLWRIYYD-ITDVEFELIASFWPSLPADLQAAYENPRDKILVFKDENFWMIRGYA 1071
Query: 421 LQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYP-KPI 479
+ P YP + TLG ID+A+ + KTYFF G WR+ E ++MD G+P + +
Sbjct: 1072VLPDYPKSIHTLGFPGRVKKIDAAVCDKTTRKTYFFVGIWCWRFDEMTQTMDKGFPQRVV 1251
Query: 480 TIWKGIPESPQGAFVHKENGFTYFIK-------EKSTGNSTKMLR 517
+ GI AF +K GF +F + + T N T+++R
Sbjct: 1252KHFPGISIRVDAAFQYK--GFFFFSRGSKQFEYDIKTKNITRIMR 1380
>ref|NM_032007.1| Mus musculus collagenase-like B (Mcolb-pending), mRNA
Length = 1400
Score = 237 bits (605), Expect = 2e-60
Identities = 156/443 (35%), Positives = 212/443 (47%), Gaps = 6/443 (1%)
Frame = +1
Query: 67 ETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALT--G 124
E M + MQQ +G+ +TG D T+ MKKPRCGVPD YA+T
Sbjct: 166 EVMAEKLRQMQQLFGLKVTGNSDPETLRAMKKPRCGVPDVAP-----------YAITHNN 312
Query: 125 QKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDI 184
+W H+ YSI N TP + A AI RAF VW +VTPLTF+ V + + DI
Sbjct: 313 PRWTKTHLTYSILNYTPYLSKAVVEDAIARAFRVWSDVTPLTFQRV-------FEEEGDI 471
Query: 185 TIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVA 244
+ F G HGD FDG AHA+ PG G+GG+ H+D D+ WT N++ +LF V
Sbjct: 472 VLSFHRGDHGDLYTFDGSKYHFAHAFLPGLGLGGNVHYDLDQKWT---DNNEDFNLFYVT 642
Query: 245 VHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXX 304
HELGH+LGL HSND A+M P Y + D F L DD+ IQ +YG
Sbjct: 643 AHELGHSLGLSHSNDEEALMFPSYTWSNKD-FVLNQDDINRIQALYGPSPNPIQLTDA-- 813
Query: 305 XXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFVFKD 364
++ P F+ ++ R E+ FKD
Sbjct: 814 ------TLDPCNSGL----------------------------TFDAIITYRGEVIFFKD 891
Query: 365 QWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE-NSEGNFVFFKSNKFWVFKDTTLQP 423
+++ RV + + + I W LP DA YE + FFK +K W ++ +
Sbjct: 892 RFYIRV-ISFLPEPLIDVIDLTWPNLPGKFDAAYEVSGVDELRFFKGSKVWAVQEQNVLE 1068
Query: 424 GYPHDLITLGSGIPSH--GIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT- 480
G+P D+ + G PS+ ID+A+ E+ GKTYFF YWRY E RSMDPGYP+ I
Sbjct: 1069GFPMDIQSF-FGFPSNVTNIDAAVCEEETGKTYFFVDHMYWRYDENTRSMDPGYPRLIAE 1245
Query: 481 IWKGIPESPQGAFVHKENGFTYF 503
+ GI + KE+ F +F
Sbjct: 1246DFPGIDYKVDDV-IQKEDNFYFF 1311
Score = 48.1 bits (113), Expect = 0.002
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 4/160 (2%)
Frame = +1
Query: 403 GNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYW 462
G +FFK ++F++ + + P D+I L D+A V + FFKG + W
Sbjct: 868 GEVIFFK-DRFYI-RVISFLPEPLIDVIDLTWPNLPGKFDAAYEVSGVDELRFFKGSKVW 1041
Query: 463 RYGEEMRSMDPGYPKPITIWKGIPESP---QGAFVHKENGFTYFIKEKSTGNSTKMLR-V 518
E+ ++ G+P I + G P + A +E G TYF + + R +
Sbjct: 1042 AVQEQ--NVLEGFPMDIQSFFGFPSNVTNIDAAVCEEETGKTYFFVDHMYWRYDENTRSM 1215
Query: 519 EPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDIIIKLDN 558
+PGYPR I +DF G D D D+I K DN
Sbjct: 1216 DPGYPRLIAEDFPGIDYKVD------------DVIQKEDN 1299
>emb|AJ278461.1|MMU278461 Mus musculus mRNA for putative matrix metalloproteinase (McolB
gene)
Length = 1400
Score = 237 bits (605), Expect = 2e-60
Identities = 156/443 (35%), Positives = 212/443 (47%), Gaps = 6/443 (1%)
Frame = +1
Query: 67 ETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALT--G 124
E M + MQQ +G+ +TG D T+ MKKPRCGVPD YA+T
Sbjct: 166 EVMAEKLRQMQQLFGLKVTGNSDPETLRAMKKPRCGVPDVAP-----------YAITHNN 312
Query: 125 QKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDI 184
+W H+ YSI N TP + A AI RAF VW +VTPLTF+ V + + DI
Sbjct: 313 PRWTKTHLTYSILNYTPYLSKAVVEDAIARAFRVWSDVTPLTFQRV-------FEEEGDI 471
Query: 185 TIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVA 244
+ F G HGD FDG AHA+ PG G+GG+ H+D D+ WT N++ +LF V
Sbjct: 472 VLSFHRGDHGDLYTFDGSKYHFAHAFLPGLGLGGNVHYDLDQKWT---DNNEDFNLFYVT 642
Query: 245 VHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXX 304
HELGH+LGL HSND A+M P Y + D F L DD+ IQ +YG
Sbjct: 643 AHELGHSLGLSHSNDEEALMFPSYTWSNKD-FVLNQDDINRIQALYGPSPNPIQLTDA-- 813
Query: 305 XXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREMFVFKD 364
++ P F+ ++ R E+ FKD
Sbjct: 814 ------TLDPCNSGL----------------------------TFDAIITYRGEVIFFKD 891
Query: 365 QWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE-NSEGNFVFFKSNKFWVFKDTTLQP 423
+++ RV + + + I W LP DA YE + FFK +K W ++ +
Sbjct: 892 RFYIRV-ISFLPEPLIDVIDLTWPNLPGKFDAAYEVSGVDELRFFKGSKVWAVQEQNVLE 1068
Query: 424 GYPHDLITLGSGIPSH--GIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT- 480
G+P D+ + G PS+ ID+A+ E+ GKTYFF YWRY E RSMDPGYP+ I
Sbjct: 1069GFPMDIQSF-FGFPSNVTNIDAAVCEEETGKTYFFVDHMYWRYDENTRSMDPGYPRLIAE 1245
Query: 481 IWKGIPESPQGAFVHKENGFTYF 503
+ GI + KE+ F +F
Sbjct: 1246DFPGIDYKVDDV-IQKEDNFYFF 1311
Score = 48.1 bits (113), Expect = 0.002
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 4/160 (2%)
Frame = +1
Query: 403 GNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYW 462
G +FFK ++F++ + + P D+I L D+A V + FFKG + W
Sbjct: 868 GEVIFFK-DRFYI-RVISFLPEPLIDVIDLTWPNLPGKFDAAYEVSGVDELRFFKGSKVW 1041
Query: 463 RYGEEMRSMDPGYPKPITIWKGIPESP---QGAFVHKENGFTYFIKEKSTGNSTKMLR-V 518
E+ ++ G+P I + G P + A +E G TYF + + R +
Sbjct: 1042 AVQEQ--NVLEGFPMDIQSFFGFPSNVTNIDAAVCEEETGKTYFFVDHMYWRYDENTRSM 1215
Query: 519 EPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDIIIKLDN 558
+PGYPR I +DF G D D D+I K DN
Sbjct: 1216 DPGYPRLIAEDFPGIDYKVD------------DVIQKEDN 1299
>gb|U37791.1|HSU37791 Homo sapiens clone rasi-1 matrix metalloproteinase RASI-1 mRNA,
complete cds
Length = 3222
Score = 224 bits (570), Expect = 3e-56
Identities = 156/496 (31%), Positives = 242/496 (48%), Gaps = 8/496 (1%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L +YGYL + + E + A+ A Q+ + ++G++D T M++PRCG+ D
Sbjct: 172 YLSQYGYLQKPLEGSNNFKP-EDITEALRAFQEASELPVSGQLDDATRARMRQPRCGLED 348
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
FN + +Y L G +W+ KH+ + I N+ + R A+R+AF W NV PL
Sbjct: 349 P------FNQKTLKYLLLG-RWRKKHLTFRILNLPSTLPPHTARAALRQAFQDWSNVAPL 507
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGD-----SSPFDGEGGFLAHAYFPGPGIGGDT 220
TF+EV + G D+ ++ FHG S+ FDG G LAHA P G
Sbjct: 508 TFQEV-----QAGAADIRLS------FHGRQSSYCSNTFDGPGRVLAHADIPEL---GSV 645
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT G + G +L ++A HE+GHALGL HS A+MAP Y+ +FKL
Sbjct: 646 HFDEDEFWTEG--TYRGVNLRIIAAHEVGHALGLGHSRYSQALMAPVYEGYR-PHFKLHP 816
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ +YG ++PP + P
Sbjct: 817 DDVAGIQALYGKKSPVIRDEEEEETEL--PTVPPV-------------------PTEPSP 933
Query: 341 KPNICDGNFNTLVI-LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
P+ C + +++ R + + FK + W V ++ G +++ W GLP ++DA
Sbjct: 934 MPDPCSSELDAMMLGPRGKTYAFKGDYVWTVSDSG--PGPLFRVSALWEGLPGNLDAAVY 1107
Query: 400 NSEGNFV-FFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
+ ++ FFK +K W + + + PG+P L + +D+A++W K + FKG
Sbjct: 1108SPRTQWIHFFKGDKVWRYINFKMSPGFPKKLNRV-----EPNLDAALYWPLNQKVFLFKG 1272
Query: 459 DRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKMLR 517
YW++ E R+ YPKPI ++ G+P P A + ++G YF K K + LR
Sbjct: 1273SGYWQWDELARTDFSSYPKPIKGLFTGVPNQPSAA-MSWQDGRVYFFKGKVYWRLNQQLR 1449
Query: 518 VEPGYPRSILKDFMGC 533
VE GYPR+I ++M C
Sbjct: 1450VEKGYPRNISHNWMHC 1497
>ref|NM_002429.2| Homo sapiens matrix metalloproteinase 19 (MMP19), transcript
variant rasi-1, mRNA
Length = 3249
Score = 224 bits (570), Expect = 3e-56
Identities = 156/496 (31%), Positives = 242/496 (48%), Gaps = 8/496 (1%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L +YGYL + + E + A+ A Q+ + ++G++D T M++PRCG+ D
Sbjct: 199 YLSQYGYLQKPLEGSNNFKP-EDITEALRAFQEASELPVSGQLDDATRARMRQPRCGLED 375
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
FN + +Y L G +W+ KH+ + I N+ + R A+R+AF W NV PL
Sbjct: 376 P------FNQKTLKYLLLG-RWRKKHLTFRILNLPSTLPPHTARAALRQAFQDWSNVAPL 534
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGD-----SSPFDGEGGFLAHAYFPGPGIGGDT 220
TF+EV + G D+ ++ FHG S+ FDG G LAHA P G
Sbjct: 535 TFQEV-----QAGAADIRLS------FHGRQSSYCSNTFDGPGRVLAHADIPEL---GSV 672
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT G + G +L ++A HE+GHALGL HS A+MAP Y+ +FKL
Sbjct: 673 HFDEDEFWTEG--TYRGVNLRIIAAHEVGHALGLGHSRYSQALMAPVYEGYR-PHFKLHP 843
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ +YG ++PP + P
Sbjct: 844 DDVAGIQALYGKKSPVIRDEEEEETEL--PTVPPV-------------------PTEPSP 960
Query: 341 KPNICDGNFNTLVI-LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
P+ C + +++ R + + FK + W V ++ G +++ W GLP ++DA
Sbjct: 961 MPDPCSSELDAMMLGPRGKTYAFKGDYVWTVSDSG--PGPLFRVSALWEGLPGNLDAAVY 1134
Query: 400 NSEGNFV-FFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
+ ++ FFK +K W + + + PG+P L + +D+A++W K + FKG
Sbjct: 1135SPRTQWIHFFKGDKVWRYINFKMSPGFPKKLNRV-----EPNLDAALYWPLNQKVFLFKG 1299
Query: 459 DRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKMLR 517
YW++ E R+ YPKPI ++ G+P P A + ++G YF K K + LR
Sbjct: 1300SGYWQWDELARTDFSSYPKPIKGLFTGVPNQPSAA-MSWQDGRVYFFKGKVYWRLNQQLR 1476
Query: 518 VEPGYPRSILKDFMGC 533
VE GYPR+I ++M C
Sbjct: 1477VEKGYPRNISHNWMHC 1524
>emb|X92521.1|HSMMP19 H.sapiens mRNA for MMP-19 protein
Length = 1811
Score = 224 bits (570), Expect = 3e-56
Identities = 156/496 (31%), Positives = 242/496 (48%), Gaps = 8/496 (1%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L +YGYL + + E + A+ A Q+ + ++G++D T M++PRCG+ D
Sbjct: 192 YLSQYGYLQKPLEGSNNFKP-EDITEALRAFQEASELPVSGQLDDATRARMRQPRCGLED 368
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
FN + +Y L G +W+ KH+ + I N+ + R A+R+AF W NV PL
Sbjct: 369 P------FNQKTLKYLLLG-RWRKKHLTFRILNLPSTLPPHTARAALRQAFQDWSNVAPL 527
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGD-----SSPFDGEGGFLAHAYFPGPGIGGDT 220
TF+EV + G D+ ++ FHG S+ FDG G LAHA P G
Sbjct: 528 TFQEV-----QAGAADIRLS------FHGRQSSYCSNTFDGPGRVLAHADIPEL---GSV 665
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT G + G +L ++A HE+GHALGL HS A+MAP Y+ +FKL
Sbjct: 666 HFDEDEFWTEG--TYRGVNLRIIAAHEVGHALGLGHSRYSQALMAPVYEGYR-PHFKLHP 836
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ +YG ++PP + P
Sbjct: 837 DDVAGIQALYGKKSPVIRDEEEEETEL--PTVPPV-------------------PTEPSP 953
Query: 341 KPNICDGNFNTLVI-LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
P+ C + +++ R + + FK + W V ++ G +++ W GLP ++DA
Sbjct: 954 MPDPCSSELDAMMLGPRGKTYAFKGDYVWTVSDSG--PGPLFRVSALWEGLPGNLDAAVY 1127
Query: 400 NSEGNFV-FFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
+ ++ FFK +K W + + + PG+P L + +D+A++W K + FKG
Sbjct: 1128SPRTQWIHFFKGDKVWRYINFKMSPGFPKKLNRV-----EPNLDAALYWPLNQKVFLFKG 1292
Query: 459 DRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKMLR 517
YW++ E R+ YPKPI ++ G+P P A + ++G YF K K + LR
Sbjct: 1293SGYWQWDELARTDFSSYPKPIKGLFTGVPNQPSAA-MSWQDGRVYFFKGKVYWRLNQQLR 1469
Query: 518 VEPGYPRSILKDFMGC 533
VE GYPR+I ++M C
Sbjct: 1470VEKGYPRNISHNWMHC 1517
>gb|U38321.1|HSU38321 Homo sapiens clone rasi-11 matrix metalloproteinase RASI-1 mRNA,
complete cds
Length = 2231
Score = 224 bits (570), Expect = 3e-56
Identities = 156/496 (31%), Positives = 242/496 (48%), Gaps = 8/496 (1%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L +YGYL + + E + A+ A Q+ + ++G++D T M++PRCG+ D
Sbjct: 167 YLSQYGYLQKPLEGSNNFKP-EDITEALRAFQEASELPVSGQLDDATRARMRQPRCGLED 343
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
FN + +Y L G +W+ KH+ + I N+ + R A+R+AF W NV PL
Sbjct: 344 P------FNQKTLKYLLLG-RWRKKHLTFRILNLPSTLPPHTARAALRQAFQDWSNVAPL 502
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGD-----SSPFDGEGGFLAHAYFPGPGIGGDT 220
TF+EV + G D+ ++ FHG S+ FDG G LAHA P G
Sbjct: 503 TFQEV-----QAGAADIRLS------FHGRQSSYCSNTFDGPGRVLAHADIPEL---GSV 640
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT G + G +L ++A HE+GHALGL HS A+MAP Y+ +FKL
Sbjct: 641 HFDEDEFWTEG--TYRGVNLRIIAAHEVGHALGLGHSRYSQALMAPVYEGYR-PHFKLHP 811
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ +YG ++PP + P
Sbjct: 812 DDVAGIQALYGKKSPVIRDEEEEETEL--PTVPPV-------------------PTEPSP 928
Query: 341 KPNICDGNFNTLVI-LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
P+ C + +++ R + + FK + W V ++ G +++ W GLP ++DA
Sbjct: 929 MPDPCSSELDAMMLGPRGKTYAFKGDYVWTVSDSG--PGPLFRVSALWEGLPGNLDAAVY 1102
Query: 400 NSEGNFV-FFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
+ ++ FFK +K W + + + PG+P L + +D+A++W K + FKG
Sbjct: 1103SPRTQWIHFFKGDKVWRYINFKMSPGFPKKLNRV-----EPNLDAALYWPLNQKVFLFKG 1267
Query: 459 DRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKMLR 517
YW++ E R+ YPKPI ++ G+P P A + ++G YF K K + LR
Sbjct: 1268SGYWQWDELARTDFSSYPKPIKGLFTGVPNQPSAA-MSWQDGRVYFFKGKVYWRLNQQLR 1444
Query: 518 VEPGYPRSILKDFMGC 533
VE GYPR+I ++M C
Sbjct: 1445VEKGYPRNISHNWMHC 1492
>emb|Y08622.1|HSRMMP18 H.sapiens mRNA for matrix metalloproteinase MMP-18
Length = 2248
Score = 223 bits (569), Expect = 3e-56
Identities = 156/496 (31%), Positives = 241/496 (48%), Gaps = 8/496 (1%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L +YGYL + + E + A+ A Q+ + ++G++D T M++PRCG+ D
Sbjct: 191 YLSQYGYLQKPLEGSNNFKP-EDITEALRAFQEASELPVSGQLDDATRARMRQPRCGLED 367
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
FN + +Y L G +W+ KH+ + I N+ + R A+R+AF W NV PL
Sbjct: 368 P------FNQKTLKYLLLG-RWRKKHLTFRILNLPSTLPPHTARAALRQAFQDWSNVAPL 526
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGD-----SSPFDGEGGFLAHAYFPGPGIGGDT 220
TF+EV + G D+ ++ FHG S+ FDG G LAHA P G
Sbjct: 527 TFQEV-----QAGAADIRLS------FHGRQSSYCSNTFDGPGRVLAHADIPEL---GSV 664
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT G + G +L ++A HE+GHALGL HS A+MAP Y+ +FKL
Sbjct: 665 HFDEDEFWTEG--TYRGVNLRIIAAHEVGHALGLGHSRYSQALMAPVYEGYR-PHFKLHP 835
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ +YG ++PP + P
Sbjct: 836 DDVAGIQALYGKKSPVIRDEEEEETEL--PTVPPV-------------------PTEPSP 952
Query: 341 KPNICDGNFNTLVI-LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
P+ C + +++ R + + FK + W V ++ G +++ W GLP ++DA
Sbjct: 953 MPDPCSSELDAMMLGPRGKTYAFKGDYVWTVSDSG--PGPLFRVSALWEGLPGNLDAAVY 1126
Query: 400 NSEGNFV-FFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
+ ++ FFK +K W + + + PG+P L +D+A++W K + FKG
Sbjct: 1127SPRTQWIHFFKGDKVWRYINFKMSPGFPKKL-----NRSEPNLDAALYWPLNQKVFLFKG 1291
Query: 459 DRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKMLR 517
YW++ E R+ YPKPI ++ G+P P A + ++G YF K K + LR
Sbjct: 1292SGYWQWDELARTDFSSYPKPIKGLFTGVPNQPSAA-MSWQDGRVYFFKGKVYWRLNQQLR 1468
Query: 518 VEPGYPRSILKDFMGC 533
VE GYPR+I ++M C
Sbjct: 1469VEKGYPRNISHNWMHC 1516
>gb|AC090980.5| Homo sapiens chromosome 8, clone RP11-433O22, complete sequence
Length = 182881
Score = 223 bits (568), Expect = 4e-56
Identities = 102/112 (91%), Positives = 107/112 (95%)
Frame = -1
Query: 132 IAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASG 191
+ +SIKNVTPKVGD ETRKAIRRAFDVWQNVTPLTFEEVPY ELENGKRDVDITIIFASG
Sbjct: 31276 LTFSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASG 31097
Query: 192 FHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLV 243
FHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDG +F++
Sbjct: 31096 FHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGKYMFVL 30941
Score = 107 bits (266), Expect = 4e-21
Identities = 58/93 (62%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
Frame = -1
Query: 40 YFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKP 99
Y ++VWLQKYGYLPPTDPRMSVLRSAETMQSA+AAMQQFYGINMTGKVDRNTI+ + P
Sbjct: 60613 YLLLQVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIE*VMAP 60434
Query: 100 ---RCGVPDQTRGSSKFNIRRKRYALTGQKWQH 129
QT+ S K + T QKW +
Sbjct: 60433 ILLSFWSLSQTK*SGKLYMNS-----TNQKWSN 60350
Score = 92.4 bits (228), Expect = 1e-16
Identities = 40/44 (90%), Positives = 41/44 (92%)
Frame = -3
Query: 95 WMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKN 138
WMKKPRCGVPDQTRGSSKF+IRRKRYALTGQKWQHKHI Y KN
Sbjct: 49889 WMKKPRCGVPDQTRGSSKFHIRRKRYALTGQKWQHKHITYRYKN 49758
>ref|NM_021412.1| Mus musculus matrix metalloproteinase 19 (Mmp19), mRNA
Length = 2132
Score = 221 bits (564), Expect = 1e-55
Identities = 167/513 (32%), Positives = 240/513 (46%), Gaps = 8/513 (1%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L +YGYL R E + A+ Q+ G+ ++G++D T MK+PRCG+ D
Sbjct: 176 YLLQYGYLQKPLEGADDFR-LEDITEALRTFQEASGLPISGQMDDATRARMKQPRCGLED 352
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
FN + +Y L G W+ K++ + I NV + R A+ +AF W +V PL
Sbjct: 353 P------FNQKSLKYLLLGH-WRKKNLTFRIFNVPSTLSLPRVRAALHQAFKYWSSVAPL 511
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGD-----SSPFDGEGGFLAHAYFPGPGIGGDT 220
TF EV + G D+ ++ FHG S+ FDG G LAHA P G
Sbjct: 512 TFREV-----KAGWADIRLS------FHGRQSLYCSNTFDGPGKVLAHADIPELG---SI 649
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT G + G +L ++A HE+GHALGL HS A+MAP Y + FKL
Sbjct: 650 HFDKDELWTEGT--YQGVNLRIIAAHEVGHALGLGHSRYTQALMAPVYAGYQ-PFFKLHP 820
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ +YG ++ P + PG
Sbjct: 821 DDVAGIQALYGKRSPETRDEEEETEML---TVSPV-------------------TAKPGP 934
Query: 341 KPNICDGNFNTLVI-LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID-AVY 398
PN C G + +V+ R + + FK + W V ++ G QI+ W GLP ++D AVY
Sbjct: 935 MPNPCSGEVDAMVLGPRGKTYAFKGDYVWTVTDSG--PGPLFQISALWEGLPGNLDAAVY 1108
Query: 399 ENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
FFK NK W + D + PG+P + +D+A++W K + FKG
Sbjct: 1109SPRTRRTHFFKGNKVWRYVDFKMSPGFPMKFNRV-----EPNLDAALYWPVNQKVFLFKG 1273
Query: 459 DRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKMLR 517
YW++ E R+ YPKPI ++ G+P+ P A + ++G YF K K + LR
Sbjct: 1274SGYWQWDELARTDLSRYPKPIKELFTGVPDRPSAA-MSWQDGQVYFFKGKEYWRLNQQLR 1450
Query: 518 VEPGYPRSILKDFMGCDGPTDRDKDRHSPQDDV 550
V GYPR+ +M C T D +S DV
Sbjct: 1451VAKGYPRN-TTHWMHCGSQT---PDTNSSTGDV 1537
>gb|AF155221.1|AF155221 Mus musculus matrix metalloproteinase 19 (Mmp19) mRNA, complete cds
Length = 2132
Score = 221 bits (564), Expect = 1e-55
Identities = 167/513 (32%), Positives = 240/513 (46%), Gaps = 8/513 (1%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L +YGYL R E + A+ Q+ G+ ++G++D T MK+PRCG+ D
Sbjct: 176 YLLQYGYLQKPLEGADDFR-LEDITEALRTFQEASGLPISGQMDDATRARMKQPRCGLED 352
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
FN + +Y L G W+ K++ + I NV + R A+ +AF W +V PL
Sbjct: 353 P------FNQKSLKYLLLGH-WRKKNLTFRIFNVPSTLSLPRVRAALHQAFKYWSSVAPL 511
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGD-----SSPFDGEGGFLAHAYFPGPGIGGDT 220
TF EV + G D+ ++ FHG S+ FDG G LAHA P G
Sbjct: 512 TFREV-----KAGWADIRLS------FHGRQSLYCSNTFDGPGKVLAHADIPELG---SI 649
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT G + G +L ++A HE+GHALGL HS A+MAP Y + FKL
Sbjct: 650 HFDKDELWTEGT--YQGVNLRIIAAHEVGHALGLGHSRYTQALMAPVYAGYQ-PFFKLHP 820
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ +YG ++ P + PG
Sbjct: 821 DDVAGIQALYGKRSPETRDEEEETEML---TVSPV-------------------TAKPGP 934
Query: 341 KPNICDGNFNTLVI-LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID-AVY 398
PN C G + +V+ R + + FK + W V ++ G QI+ W GLP ++D AVY
Sbjct: 935 MPNPCSGEVDAMVLGPRGKTYAFKGDYVWTVTDSG--PGPLFQISALWEGLPGNLDAAVY 1108
Query: 399 ENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
FFK NK W + D + PG+P + +D+A++W K + FKG
Sbjct: 1109SPRTRRTHFFKGNKVWRYVDFKMSPGFPMKFNRV-----EPNLDAALYWPVNQKVFLFKG 1273
Query: 459 DRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKMLR 517
YW++ E R+ YPKPI ++ G+P+ P A + ++G YF K K + LR
Sbjct: 1274SGYWQWDELARTDLSRYPKPIKELFTGVPDRPSAA-MSWQDGQVYFFKGKEYWRLNQQLR 1450
Query: 518 VEPGYPRSILKDFMGCDGPTDRDKDRHSPQDDV 550
V GYPR+ +M C T D +S DV
Sbjct: 1451VAKGYPRN-TTHWMHCGSQT---PDTNSSTGDV 1537
>gb|AF162446.1|AF162446 Mus musculus matrix metalloproteinase-19 mRNA, complete cds
Length = 1862
Score = 221 bits (564), Expect = 1e-55
Identities = 167/513 (32%), Positives = 240/513 (46%), Gaps = 8/513 (1%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L +YGYL R E + A+ Q+ G+ ++G++D T MK+PRCG+ D
Sbjct: 176 YLLQYGYLQKPLEGADDFR-LEDITEALRTFQEASGLPISGQMDDATRARMKQPRCGLED 352
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
FN + +Y L G W+ K++ + I NV + R A+ +AF W +V PL
Sbjct: 353 P------FNQKSLKYLLLGH-WRKKNLTFRIFNVPSTLSLPRVRAALHQAFKYWSSVAPL 511
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGD-----SSPFDGEGGFLAHAYFPGPGIGGDT 220
TF EV + G D+ ++ FHG S+ FDG G LAHA P G
Sbjct: 512 TFREV-----KAGWADIRLS------FHGRQSLYCSNTFDGPGKVLAHADIPELG---SI 649
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT G + G +L ++A HE+GHALGL HS A+MAP Y + FKL
Sbjct: 650 HFDKDELWTEGT--YQGVNLRIIAAHEVGHALGLGHSRYTQALMAPVYAGYQ-PFFKLHP 820
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ +YG ++ P + PG
Sbjct: 821 DDVAGIQALYGKRSPETRDEEEETEML---TVSPV-------------------TAKPGP 934
Query: 341 KPNICDGNFNTLVI-LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID-AVY 398
PN C G + +V+ R + + FK + W V ++ G QI+ W GLP ++D AVY
Sbjct: 935 MPNPCSGEVDAMVLGPRGKTYAFKGDYVWTVTDSG--PGPLFQISALWEGLPGNLDAAVY 1108
Query: 399 ENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
FFK NK W + D + PG+P + +D+A++W K + FKG
Sbjct: 1109SPRTRRTHFFKGNKVWRYVDFKMSPGFPMKFNRV-----EPNLDAALYWPVNQKVFLFKG 1273
Query: 459 DRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKMLR 517
YW++ E R+ YPKPI ++ G+P+ P A + ++G YF K K + LR
Sbjct: 1274SGYWQWDELARTDLSRYPKPIKELFTGVPDRPSAA-MSWQDGQVYFFKGKEYWRLNQQLR 1450
Query: 518 VEPGYPRSILKDFMGCDGPTDRDKDRHSPQDDV 550
V GYPR+ +M C T D +S DV
Sbjct: 1451VAKGYPRN-TTHWMHCGSQT---PDTNSSTGDV 1537
>gb|AF153199.1|AF153199 Mus musculus matrix metalloproteinase 19 mRNA, complete cds
Length = 1703
Score = 221 bits (564), Expect = 1e-55
Identities = 167/513 (32%), Positives = 240/513 (46%), Gaps = 8/513 (1%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L +YGYL R E + A+ Q+ G+ ++G++D T MK+PRCG+ D
Sbjct: 148 YLLQYGYLQKPLEGADDFR-LEDITEALRTFQEASGLPISGQMDDATRARMKQPRCGLED 324
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
FN + +Y L G W+ K++ + I NV + R A+ +AF W +V PL
Sbjct: 325 P------FNQKSLKYLLLGH-WRKKNLTFRIFNVPSTLSLPRVRAALHQAFKYWSSVAPL 483
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGD-----SSPFDGEGGFLAHAYFPGPGIGGDT 220
TF EV + G D+ ++ FHG S+ FDG G LAHA P G
Sbjct: 484 TFREV-----KAGWADIRLS------FHGRQSLYCSNTFDGPGKVLAHADIPELG---SI 621
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT G + G +L ++A HE+GHALGL HS A+MAP Y + FKL
Sbjct: 622 HFDKDELWTEGT--YQGVNLRIIAAHEVGHALGLGHSRYTQALMAPVYAGYQ-PFFKLHP 792
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD+ GIQ +YG ++ P + PG
Sbjct: 793 DDVAGIQALYGKRSPETRDEEEETEML---TVSPV-------------------TAKPGP 906
Query: 341 KPNICDGNFNTLVI-LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID-AVY 398
PN C G + +V+ R + + FK + W V ++ G QI+ W GLP ++D AVY
Sbjct: 907 MPNPCSGEVDAMVLGPRGKTYAFKGDYVWTVTDSG--PGPLFQISALWEGLPGNLDAAVY 1080
Query: 399 ENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
FFK NK W + D + PG+P + +D+A++W K + FKG
Sbjct: 1081SPRTRRTHFFKGNKVWRYVDFKMSPGFPMKFNRV-----EPNLDAALYWPVNQKVFLFKG 1245
Query: 459 DRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKMLR 517
YW++ E R+ YPKPI ++ G+P+ P A + ++G YF K K + LR
Sbjct: 1246SGYWQWDELARTDLSRYPKPIKELFTGVPDRPSAA-MSWQDGQVYFFKGKEYWRLNQQLR 1422
Query: 518 VEPGYPRSILKDFMGCDGPTDRDKDRHSPQDDV 550
V GYPR+ +M C T D +S DV
Sbjct: 1423VAKGYPRN-TTHWMHCGSQT---PDTNSSTGDV 1509
>gb|AF315683.1|AF315683 Homo sapiens matrix metalloproteinase 28 (MMP28) mRNA, complete cds
Length = 1753
Score = 215 bits (547), Expect = 1e-53
Identities = 150/486 (30%), Positives = 224/486 (45%), Gaps = 26/486 (5%)
Frame = +1
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+KYGYL P+ ++ AI A Q + ++G +DR T+ M +PRCGV
Sbjct: 124 EAFLEKYGYLNEQVPKAP---TSTRFSDAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGV 294
Query: 104 PDQT--------------RGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETR 149
D R +K R+KR+A G KW +H++Y + N + + R
Sbjct: 295 TDTNSYAAWAERISDLFARHRTKMR-RKKRFAKQGNKWYKQHLSYRLVNWPEHLPEPAVR 471
Query: 150 KAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGD--SSPFDGEGGFLA 207
A+R AF +W NV+ L F E P DI + F G H D + FDG GG LA
Sbjct: 472 GAVRAAFQLWSNVSALEFWEAP------ATGPADIRLTFFQGDHNDGLGNAFDGPGGALA 633
Query: 208 HAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPF 267
HA+ P G+ HFD DE W+L G +LF+V HE+GH LGL HS P A+MAP+
Sbjct: 634 HAFLPR---RGEAHFDQDERWSLS--RRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPY 798
Query: 268 YQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXX 327
Y+ + D L DD+ +Q +YG P
Sbjct: 799 YKRLGRDAL-LSWDDVLAVQSLYG---------------------KPLGGSVAVQLPGKL 912
Query: 328 XXXXXXXXSY-PGAK------PNICDGNFNTLVILR-REMFVFKDQWFWRV-RNNRVMDG 378
SY P + P C +F+ + + R +++++FK FW V + V +
Sbjct: 913 FTDFETWDSYSPQGRRPETQGPKYCHSSFDAITVDRQQQLYIFKGSHFWEVAADGNVSEP 1092
Query: 379 YPMQITYFWRGLPPSIDAVYEN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIP 437
P+Q W GLPP+I+A + ++G+F FFK + W F+ G P + G+P
Sbjct: 1093RPLQER--WVGLPPNIEAAAVSLNDGDFYFFKGGRCWRFRGPKPVWGLPQ--LCRAGGLP 1260
Query: 438 SHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKE 497
H D+A+++ + + FKG RY+ ++P YP+ + W GIPE GA +
Sbjct: 1261RHP-DAALFFPPLRRLILFKGARYYVLARGGLQVEPYYPRSLQDWGGIPEEVSGALPRPD 1437
Query: 498 NGFTYF 503
+F
Sbjct: 1438GSIIFF 1455
Score = 42.0 bits (97), Expect = 0.18
Identities = 44/149 (29%), Positives = 63/149 (41%), Gaps = 9/149 (6%)
Frame = +1
Query: 393 SIDAVYENSEGNFVFFKSNKFW-VFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVG 451
S DA+ + + FK + FW V D + P L G+P + +A+ D G
Sbjct: 994 SFDAITVDRQQQLYIFKGSHFWEVAADGNVSE--PRPLQERWVGLPPNIEAAAVSLND-G 1164
Query: 452 KTYFFKGDRYWRYGEEMRSMDPGYPKP-ITIWKGIPESPQGAFVHKE-------NGFTYF 503
YFFKG R WR+ R P + P + G+P P A G Y+
Sbjct: 1165 DFYFFKGGRCWRF----RGPKPVWGLPQLCRAGGLPRHPDAALFFPPLRRLILFKGARYY 1332
Query: 504 IKEKSTGNSTKMLRVEPGYPRSILKDFMG 532
+ + L+VEP YPRS L+D+ G
Sbjct: 1333 VLARGG------LQVEPYYPRS-LQDWGG 1398
>ref|NM_024302.2| Homo sapiens matrix metalloproteinase 28 (MMP28), transcript
variant 1, mRNA
Length = 2481
Score = 215 bits (547), Expect = 1e-53
Identities = 150/486 (30%), Positives = 224/486 (45%), Gaps = 26/486 (5%)
Frame = +3
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+KYGYL P+ ++ AI A Q + ++G +DR T+ M +PRCGV
Sbjct: 384 EAFLEKYGYLNEQVPKAP---TSTRFSDAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGV 554
Query: 104 PDQT--------------RGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETR 149
D R +K R+KR+A G KW +H++Y + N + + R
Sbjct: 555 TDTNSYAAWAERISDLFARHRTKMR-RKKRFAKQGNKWYKQHLSYRLVNWPEHLPEPAVR 731
Query: 150 KAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGD--SSPFDGEGGFLA 207
A+R AF +W NV+ L F E P DI + F G H D + FDG GG LA
Sbjct: 732 GAVRAAFQLWSNVSALEFWEAP------ATGPADIRLTFFQGDHNDGLGNAFDGPGGALA 893
Query: 208 HAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPF 267
HA+ P G+ HFD DE W+L G +LF+V HE+GH LGL HS P A+MAP+
Sbjct: 894 HAFLPR---RGEAHFDQDERWSLS--RRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPY 1058
Query: 268 YQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXX 327
Y+ + D L DD+ +Q +YG P
Sbjct: 1059YKRLGRDAL-LSWDDVLAVQSLYG---------------------KPLGGSVAVQLPGKL 1172
Query: 328 XXXXXXXXSY-PGAK------PNICDGNFNTLVILR-REMFVFKDQWFWRV-RNNRVMDG 378
SY P + P C +F+ + + R +++++FK FW V + V +
Sbjct: 1173FTDFETWDSYSPQGRRPETQGPKYCHSSFDAITVDRQQQLYIFKGSHFWEVAADGNVSEP 1352
Query: 379 YPMQITYFWRGLPPSIDAVYEN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIP 437
P+Q W GLPP+I+A + ++G+F FFK + W F+ G P + G+P
Sbjct: 1353RPLQER--WVGLPPNIEAAAVSLNDGDFYFFKGGRCWRFRGPKPVWGLPQ--LCRAGGLP 1520
Query: 438 SHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKE 497
H D+A+++ + + FKG RY+ ++P YP+ + W GIPE GA +
Sbjct: 1521RHP-DAALFFPPLRRLILFKGARYYVLARGGLQVEPYYPRSLQDWGGIPEEVSGALPRPD 1697
Query: 498 NGFTYF 503
+F
Sbjct: 1698GSIIFF 1715
Score = 42.0 bits (97), Expect = 0.18
Identities = 44/149 (29%), Positives = 63/149 (41%), Gaps = 9/149 (6%)
Frame = +3
Query: 393 SIDAVYENSEGNFVFFKSNKFW-VFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVG 451
S DA+ + + FK + FW V D + P L G+P + +A+ D G
Sbjct: 1254 SFDAITVDRQQQLYIFKGSHFWEVAADGNVSE--PRPLQERWVGLPPNIEAAAVSLND-G 1424
Query: 452 KTYFFKGDRYWRYGEEMRSMDPGYPKP-ITIWKGIPESPQGAFVHKE-------NGFTYF 503
YFFKG R WR+ R P + P + G+P P A G Y+
Sbjct: 1425 DFYFFKGGRCWRF----RGPKPVWGLPQLCRAGGLPRHPDAALFFPPLRRLILFKGARYY 1592
Query: 504 IKEKSTGNSTKMLRVEPGYPRSILKDFMG 532
+ + L+VEP YPRS L+D+ G
Sbjct: 1593 VLARGG------LQVEPYYPRS-LQDWGG 1658
>gb|AF219624.1|AF219624 Homo sapiens matrix metalloproteinase-28 precursor, mRNA, complete
cds
Length = 1817
Score = 215 bits (547), Expect = 1e-53
Identities = 150/486 (30%), Positives = 224/486 (45%), Gaps = 26/486 (5%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+KYGYL P+ ++ AI A Q + ++G +DR T+ M +PRCGV
Sbjct: 278 EAFLEKYGYLNEQVPKAP---TSTRFSDAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGV 448
Query: 104 PDQT--------------RGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETR 149
D R +K R+KR+A G KW +H++Y + N + + R
Sbjct: 449 TDTNSYAAWAERISDLFARHRTKMR-RKKRFAKQGNKWYKQHLSYRLVNWPEHLPEPAVR 625
Query: 150 KAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGD--SSPFDGEGGFLA 207
A+R AF +W NV+ L F E P DI + F G H D + FDG GG LA
Sbjct: 626 GAVRAAFQLWSNVSALEFWEAP------ATGPADIRLTFFQGDHNDGLGNAFDGPGGALA 787
Query: 208 HAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPF 267
HA+ P G+ HFD DE W+L G +LF+V HE+GH LGL HS P A+MAP+
Sbjct: 788 HAFLPR---RGEAHFDQDERWSLS--RRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPY 952
Query: 268 YQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXX 327
Y+ + D L DD+ +Q +YG P
Sbjct: 953 YKRLGRDAL-LSWDDVLAVQSLYG---------------------KPLGGSVAVQLPGKL 1066
Query: 328 XXXXXXXXSY-PGAK------PNICDGNFNTLVILR-REMFVFKDQWFWRV-RNNRVMDG 378
SY P + P C +F+ + + R +++++FK FW V + V +
Sbjct: 1067FTDFETWDSYSPQGRRPETQGPKYCHSSFDAITVDRQQQLYIFKGSHFWEVAADGNVSEP 1246
Query: 379 YPMQITYFWRGLPPSIDAVYEN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIP 437
P+Q W GLPP+I+A + ++G+F FFK + W F+ G P + G+P
Sbjct: 1247RPLQER--WVGLPPNIEAAAVSLNDGDFYFFKGGRCWRFRGPKPVWGLPQ--LCRAGGLP 1414
Query: 438 SHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKE 497
H D+A+++ + + FKG RY+ ++P YP+ + W GIPE GA +
Sbjct: 1415RHP-DAALFFPPLRRLILFKGARYYVLARGGLQVEPYYPRSLQDWGGIPEEVSGALPRPD 1591
Query: 498 NGFTYF 503
+F
Sbjct: 1592GSIIFF 1609
Score = 42.0 bits (97), Expect = 0.18
Identities = 44/149 (29%), Positives = 63/149 (41%), Gaps = 9/149 (6%)
Frame = +2
Query: 393 SIDAVYENSEGNFVFFKSNKFW-VFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVG 451
S DA+ + + FK + FW V D + P L G+P + +A+ D G
Sbjct: 1148 SFDAITVDRQQQLYIFKGSHFWEVAADGNVSE--PRPLQERWVGLPPNIEAAAVSLND-G 1318
Query: 452 KTYFFKGDRYWRYGEEMRSMDPGYPKP-ITIWKGIPESPQGAFVHKE-------NGFTYF 503
YFFKG R WR+ R P + P + G+P P A G Y+
Sbjct: 1319 DFYFFKGGRCWRF----RGPKPVWGLPQLCRAGGLPRHPDAALFFPPLRRLILFKGARYY 1486
Query: 504 IKEKSTGNSTKMLRVEPGYPRSILKDFMG 532
+ + L+VEP YPRS L+D+ G
Sbjct: 1487 VLARGG------LQVEPYYPRS-LQDWGG 1552
>gb|AF330002.1|AF330002 Homo sapiens matrix metalloprotease MMP25 mRNA, complete cds
Length = 2484
Score = 215 bits (547), Expect = 1e-53
Identities = 150/486 (30%), Positives = 224/486 (45%), Gaps = 26/486 (5%)
Frame = +3
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+KYGYL P+ ++ AI A Q + ++G +DR T+ M +PRCGV
Sbjct: 384 EAFLEKYGYLNEQVPKAP---TSTRFSDAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGV 554
Query: 104 PDQT--------------RGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETR 149
D R +K R+KR+A G KW +H++Y + N + + R
Sbjct: 555 TDTNSYAAWAERISDLFARHRTKMR-RKKRFAKQGNKWYKQHLSYRLVNWPEHLPEPAVR 731
Query: 150 KAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGD--SSPFDGEGGFLA 207
A+R AF +W NV+ L F E P DI + F G H D + FDG GG LA
Sbjct: 732 GAVRAAFQLWSNVSALEFWEAP------ATGPADIRLTFFQGDHNDGLGNAFDGPGGALA 893
Query: 208 HAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPF 267
HA+ P G+ HFD DE W+L G +LF+V HE+GH LGL HS P A+MAP+
Sbjct: 894 HAFLPR---RGEAHFDQDERWSLS--RRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPY 1058
Query: 268 YQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXX 327
Y+ + D L DD+ +Q +YG P
Sbjct: 1059YKRLGRDAL-LSWDDVLAVQSLYG---------------------KPLGGSVAVQLPGKL 1172
Query: 328 XXXXXXXXSY-PGAK------PNICDGNFNTLVILR-REMFVFKDQWFWRV-RNNRVMDG 378
SY P + P C +F+ + + R +++++FK FW V + V +
Sbjct: 1173FTDFETWDSYSPQGRRPETQGPKYCHSSFDAITVDRQQQLYIFKGSHFWEVAADGNVSEP 1352
Query: 379 YPMQITYFWRGLPPSIDAVYEN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIP 437
P+Q W GLPP+I+A + ++G+F FFK + W F+ G P + G+P
Sbjct: 1353RPLQER--WVGLPPNIEAAAVSLNDGDFYFFKGGRCWRFRGPKPVWGLPQ--LCRAGGLP 1520
Query: 438 SHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKE 497
H D+A+++ + + FKG RY+ ++P YP+ + W GIPE GA +
Sbjct: 1521RHP-DAALFFPPLRRLILFKGARYYVLARGGLQVEPYYPRSLQDWGGIPEEVSGALPRPD 1697
Query: 498 NGFTYF 503
+F
Sbjct: 1698GSIIFF 1715
Score = 42.0 bits (97), Expect = 0.18
Identities = 44/149 (29%), Positives = 63/149 (41%), Gaps = 9/149 (6%)
Frame = +3
Query: 393 SIDAVYENSEGNFVFFKSNKFW-VFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVG 451
S DA+ + + FK + FW V D + P L G+P + +A+ D G
Sbjct: 1254 SFDAITVDRQQQLYIFKGSHFWEVAADGNVSE--PRPLQERWVGLPPNIEAAAVSLND-G 1424
Query: 452 KTYFFKGDRYWRYGEEMRSMDPGYPKP-ITIWKGIPESPQGAFVHKE-------NGFTYF 503
YFFKG R WR+ R P + P + G+P P A G Y+
Sbjct: 1425 DFYFFKGGRCWRF----RGPKPVWGLPQLCRAGGLPRHPDAALFFPPLRRLILFKGARYY 1592
Query: 504 IKEKSTGNSTKMLRVEPGYPRSILKDFMG 532
+ + L+VEP YPRS L+D+ G
Sbjct: 1593 VLARGG------LQVEPYYPRS-LQDWGG 1658
>gb|AF162688.1|AF162688 Hydra vulgaris matrix metalloproteinase (mmp) mRNA, complete cds
Length = 1634
Score = 209 bits (531), Expect = 8e-52
Identities = 139/473 (29%), Positives = 230/473 (48%), Gaps = 9/473 (1%)
Frame = +2
Query: 63 LRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYAL 122
+ + + ++++I +Q+F GI ++G +D T + ++ PRCG+PD + + R +RY L
Sbjct: 170 INNEKEIRNSIENLQRFAGIPVSGILDAPTQELIETPRCGLPDFKKPNES---RNRRYTL 340
Query: 123 TGQKWQHKHIAYSI-KNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRD 181
G W+ + + + N + E + +AF +W+ VT L F ++ N +
Sbjct: 341 QGTTWKKNELTWKLLNNNNDGLTRGEIETTLHKAFSMWEAVTNLKFRQLQI----NENKK 508
Query: 182 VDITIIFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGNPNHDGND 239
DI I FA G+H D FDG GG LAHA++P G+ GD HFD E +T+ +P +G
Sbjct: 509 ADIEIKFAQGYHDDPYSFDGFGGTLAHAFYPHTNEGLSGDVHFDDAEKFTIESP--EGRS 682
Query: 240 LFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXX 299
L VAVHE+GH++GLEHSN A+M P+Y+ + + +L +DD+ GIQ IYG
Sbjct: 683 LLWVAVHEIGHSIGLEHSNVKEALMFPWYRVQDVRDIQLSDDDVLGIQSIYGSKKSIMLP 862
Query: 300 XXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTLVILRREM 359
S K I D +
Sbjct: 863 STVTPTKKMKNSFQ--------------------------MKAVILDKSTGV-------T 943
Query: 360 FVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDT 419
+ F D F+++ N+ P ++ + + S+++ Y +S+G +FFK +++ +K+
Sbjct: 944 YAFNDDEFYKINNDLKKTEGPFTVSSLFPEV-NSVNSGYMDSDGKLIFFKGTRYYTYKNF 1120
Query: 420 T----LQPGYPHDLIT-LGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPG 474
+ L+ G D + SG+ + ID+A W + G+TY F D Y+R+G +D G
Sbjct: 1121SDRKLLESGSIFDKYKGIKSGVKT--IDAAFVWNN-GRTYVFIEDEYYRFGGTKNVLDAG 1291
Query: 475 YPKPIT-IWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKMLRVEPGYPRSI 526
+P+ I W G+P++ FV + NG TYF K + +V YP+SI
Sbjct: 1292FPRKIVDNWTGVPKNIDSVFVWR-NGVTYFFKGSLFYRVNEKGQVLLNYPKSI 1447
>gb|AF354290.1|AF354290 Xenopus laevis matrix metalloproteinase MT3-MMP gene, partial cds
Length = 375
Score = 207 bits (527), Expect = 2e-51
Identities = 103/123 (83%), Positives = 108/123 (87%), Gaps = 1/123 (0%)
Frame = +2
Query: 487 ESPQGAFVHKENGFTYFIKEKSTGNSTKM-LRVEPGYPRSILKDFMGCDGPTDRDKDRHS 545
ESPQGAFV KENG+TYF K K + LRVEPGYPRSILKDFMGCD TD DK+R S
Sbjct: 2 ESPQGAFVDKENGYTYFYKGKEYWKFQNLNLRVEPGYPRSILKDFMGCDSSTDGDKERTS 181
Query: 546 PQDDVDIIIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILYCKRSMQ 605
PQDDVDI+IKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKR+GTPRHILYCKRSMQ
Sbjct: 182 PQDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQ 361
Query: 606 EWV 608
EWV
Sbjct: 362 EWV 370
>ref|NM_032950.1| Homo sapiens matrix metalloproteinase 28 (MMP28), transcript
variant 2, mRNA
Length = 2525
Score = 202 bits (515), Expect = 6e-50
Identities = 150/507 (29%), Positives = 224/507 (43%), Gaps = 47/507 (9%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+KYGYL P+ ++ AI A Q + ++G +DR T+ M +PRCGV
Sbjct: 365 EAFLEKYGYLNEQVPKAP---TSTRFSDAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGV 535
Query: 104 PDQT--------------RGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETR 149
D R +K R+KR+A G KW +H++Y + N + + R
Sbjct: 536 TDTNSYAAWAERISDLFARHRTKMR-RKKRFAKQGNKWYKQHLSYRLVNWPEHLPEPAVR 712
Query: 150 KAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGD--SSPFDGEGGFLA 207
A+R AF +W NV+ L F E P DI + F G H D + FDG GG LA
Sbjct: 713 GAVRAAFQLWSNVSALEFWEAP------ATGPADIRLTFFQGDHNDGLGNAFDGPGGALA 874
Query: 208 HAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPF 267
HA+ P G+ HFD DE W+L G +LF+V HE+GH LGL HS P A+MAP+
Sbjct: 875 HAFLPR---RGEAHFDQDERWSLS--RRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPY 1039
Query: 268 YQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXX 327
Y+ + D L DD+ +Q +YG P
Sbjct: 1040YKRLGRDAL-LSWDDVLAVQSLYG---------------------KPLGGSVAVQLPGKL 1153
Query: 328 XXXXXXXXSY-PGAK------PNICDGNFNTLVILR-REMFVFKDQWFWRV-RNNRVMDG 378
SY P + P C +F+ + + R +++++FK FW V + V +
Sbjct: 1154FTDFETWDSYSPQGRRPETQGPKYCHSSFDAITVDRQQQLYIFKGSHFWEVAADGNVSEP 1333
Query: 379 YPMQITYFWRGLPPSIDAVYEN-SEGNFVFFK---------------------SNKFWVF 416
P+Q W GLPP+I+A + ++G+F FFK + W F
Sbjct: 1334RPLQER--WVGLPPNIEAAAVSLNDGDFYFFKVQSV*LI*IPTIVGSSLKESRGGRCWRF 1507
Query: 417 KDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYP 476
+ G P + G+P H D+A+++ + + FKG RY+ ++P YP
Sbjct: 1508RGPKPVWGLPQ--LCRAGGLPRHP-DAALFFPPLRRLILFKGARYYVLARGGLQVEPYYP 1678
Query: 477 KPITIWKGIPESPQGAFVHKENGFTYF 503
+ + W GIPE GA + +F
Sbjct: 1679RSLQDWGGIPEEVSGALPRPDGSIIFF 1759
Score = 37.7 bits (86), Expect = 3.3
Identities = 44/159 (27%), Positives = 62/159 (38%), Gaps = 3/159 (1%)
Frame = +2
Query: 368 WRVRNNRVMDGYPMQITYFWRGLPPSIDA-VYENSEGNFVFFKSNKFWVFKDTTLQ--PG 424
WR R + + G P GLP DA ++ + FK +++V LQ P
Sbjct: 1499 WRFRGPKPVWGLPQLCRA--GGLPRHPDAALFFPPLRRLILFKGARYYVLARGGLQVEPY 1672
Query: 425 YPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKG 484
YP L G GIP + A+ D G FF+ DRYWR +D + T +
Sbjct: 1673 YPRSLQDWG-GIPEE-VSGALPRPD-GSIIFFRDDRYWR-------LDQAKLQATTSGRW 1822
Query: 485 IPESPQGAFVHKENGFTYFIKEKSTGNSTKMLRVEPGYP 523
E P H +G F + T + LR + P
Sbjct: 1823 ATELPWMGCWHANSGSALF*RHLLTSETGGALRAKSCSP 1939
>gb|BC002631.1|BC002631 Homo sapiens, clone MGC:4164 IMAGE:3610296, mRNA, complete cds
Length = 2100
Score = 202 bits (515), Expect = 6e-50
Identities = 150/507 (29%), Positives = 224/507 (43%), Gaps = 47/507 (9%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+KYGYL P+ ++ AI A Q + ++G +DR T+ M +PRCGV
Sbjct: 365 EAFLEKYGYLNEQVPKAP---TSTRFSDAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGV 535
Query: 104 PDQT--------------RGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETR 149
D R +K R+KR+A G KW +H++Y + N + + R
Sbjct: 536 TDTNSYAAWAERISDLFARHRTKMR-RKKRFAKQGNKWYKQHLSYRLVNWPEHLPEPAVR 712
Query: 150 KAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGD--SSPFDGEGGFLA 207
A+R AF +W NV+ L F E P DI + F G H D + FDG GG LA
Sbjct: 713 GAVRAAFQLWSNVSALEFWEAP------ATGPADIRLTFFQGDHNDGLGNAFDGPGGALA 874
Query: 208 HAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPF 267
HA+ P G+ HFD DE W+L G +LF+V HE+GH LGL HS P A+MAP+
Sbjct: 875 HAFLPR---RGEAHFDQDERWSLS--RRRGRNLFVVLAHEIGHTLGLTHSPAPRALMAPY 1039
Query: 268 YQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXX 327
Y+ + D L DD+ +Q +YG P
Sbjct: 1040YKRLGRDAL-LSWDDVLAVQSLYG---------------------KPLGGSVAVQLPGKL 1153
Query: 328 XXXXXXXXSY-PGAK------PNICDGNFNTLVILR-REMFVFKDQWFWRV-RNNRVMDG 378
SY P + P C +F+ + + R +++++FK FW V + V +
Sbjct: 1154FTDFETWDSYSPQGRRPETQGPKYCHSSFDAITVDRQQQLYIFKGSHFWEVAADGNVSEP 1333
Query: 379 YPMQITYFWRGLPPSIDAVYEN-SEGNFVFFK---------------------SNKFWVF 416
P+Q W GLPP+I+A + ++G+F FFK + W F
Sbjct: 1334RPLQER--WVGLPPNIEAAAVSLNDGDFYFFKVQSV*LI*IPTIVGSSLKESRGGRCWRF 1507
Query: 417 KDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYP 476
+ G P + G+P H D+A+++ + + FKG RY+ ++P YP
Sbjct: 1508RGPKPVWGLPQ--LCRAGGLPRHP-DAALFFPPLRRLILFKGARYYVLARGGLQVEPYYP 1678
Query: 477 KPITIWKGIPESPQGAFVHKENGFTYF 503
+ + W GIPE GA + +F
Sbjct: 1679RSLQDWGGIPEEVSGALPRPDGSIIFF 1759
Score = 37.7 bits (86), Expect = 3.3
Identities = 44/159 (27%), Positives = 62/159 (38%), Gaps = 3/159 (1%)
Frame = +2
Query: 368 WRVRNNRVMDGYPMQITYFWRGLPPSIDA-VYENSEGNFVFFKSNKFWVFKDTTLQ--PG 424
WR R + + G P GLP DA ++ + FK +++V LQ P
Sbjct: 1499 WRFRGPKPVWGLPQLCRA--GGLPRHPDAALFFPPLRRLILFKGARYYVLARGGLQVEPY 1672
Query: 425 YPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKG 484
YP L G GIP + A+ D G FF+ DRYWR +D + T +
Sbjct: 1673 YPRSLQDWG-GIPEE-VSGALPRPD-GSIIFFRDDRYWR-------LDQAKLQATTSGRW 1822
Query: 485 IPESPQGAFVHKENGFTYFIKEKSTGNSTKMLRVEPGYP 523
E P H +G F + T + LR + P
Sbjct: 1823 ATELPWMGCWHANSGSALF*RHLLTSETGGALRAKSCSP 1939
>ref|XM_083968.1| Homo sapiens matrix metalloproteinase 28 (MMP28), mRNA
Length = 2096
Score = 167 bits (422), Expect(2) = 9e-49
Identities = 115/367 (31%), Positives = 169/367 (45%), Gaps = 12/367 (3%)
Frame = +2
Query: 149 RKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDS--SPFDGEGGFL 206
R A+R AF +W NV+ L F E P DI + F G H D + FDG GG L
Sbjct: 344 RGAVRAAFQLWSNVSALEFWEAP------ATGPADIRLTFFQGDHNDGLGNAFDGPGGAL 505
Query: 207 AHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAP 266
AHA+ P G + HFD DE W+L G +LF+V HE+GH LGL HS P A+MAP
Sbjct: 506 AHAFLPRRG---EAHFDQDERWSLSRRR--GRNLFVVLAHEIGHTLGLTHSPAPRALMAP 670
Query: 267 FYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXX 326
+Y+ + D L DD+ +Q +YG P
Sbjct: 671 YYKRLGRDAL-LSWDDVLAVQSLYG---------------------KPLGGSVAVQLPGK 784
Query: 327 XXXXXXXXXSY-PGAK------PNICDGNFNTLVILR-REMFVFKDQWFWRV-RNNRVMD 377
SY P + P C +F+ + + R +++++FK FW V + V +
Sbjct: 785 LFTDFETWDSYSPQGRRPETQGPKYCHSSFDAITVDRQQQLYIFKGSHFWEVAADGNVSE 964
Query: 378 GYPMQITYFWRGLPPSIDAVYEN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGI 436
P+Q W GLPP+I+A + ++G+F FFK + W F+ G P + G+
Sbjct: 965 PRPLQER--WVGLPPNIEAAAVSLNDGDFYFFKGGRCWRFRGPKPVWGLPQ--LCRAGGL 1132
Query: 437 PSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHK 496
P H D+A+++ + + FKG RY+ ++P YP+ + W GIPE GA
Sbjct: 1133PRHP-DAALFFPPLRRLILFKGARYYVLARGGLQVEPYYPRSLQDWGGIPEEVSGALPRP 1309
Query: 497 ENGFTYF 503
+ +F
Sbjct: 1310DGSIIFF 1330
Score = 53.5 bits (127), Expect(2) = 9e-49
Identities = 34/107 (31%), Positives = 52/107 (47%), Gaps = 14/107 (13%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L+KYGYL P+ ++ AI A Q + ++G +DR T+ M +PRCGV D
Sbjct: 6 FLEKYGYLNEQVPKAP---TSTRFSDAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGVTD 176
Query: 106 Q--------------TRGSSKFNIRRKRYALTGQKWQHKHIAYSIKN 138
R +K R+KR+A G KW +H++Y + N
Sbjct: 177 TNSYAAWAERISDLFARHRTKMR-RKKRFAKQGNKWYKQHLSYRLVN 314
Score = 42.0 bits (97), Expect = 0.18
Identities = 44/149 (29%), Positives = 63/149 (41%), Gaps = 9/149 (6%)
Frame = +2
Query: 393 SIDAVYENSEGNFVFFKSNKFW-VFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVG 451
S DA+ + + FK + FW V D + P L G+P + +A+ D G
Sbjct: 869 SFDAITVDRQQQLYIFKGSHFWEVAADGNVSE--PRPLQERWVGLPPNIEAAAVSLND-G 1039
Query: 452 KTYFFKGDRYWRYGEEMRSMDPGYPKP-ITIWKGIPESPQGAFVHKE-------NGFTYF 503
YFFKG R WR+ R P + P + G+P P A G Y+
Sbjct: 1040 DFYFFKGGRCWRF----RGPKPVWGLPQLCRAGGLPRHPDAALFFPPLRRLILFKGARYY 1207
Query: 504 IKEKSTGNSTKMLRVEPGYPRSILKDFMG 532
+ + L+VEP YPRS L+D+ G
Sbjct: 1208 VLARGG------LQVEPYYPRS-LQDWGG 1273
>emb|X53598.1|PLHE6R P. lividus mRNA for hatching enzyme
Length = 2880
Score = 191 bits (486), Expect = 1e-46
Identities = 153/511 (29%), Positives = 213/511 (40%), Gaps = 53/511 (10%)
Frame = +1
Query: 42 NVEVW---LQKYGYLPPTDPRMSVLRSAE-TMQSAIAAMQQFYGINMTGKVDRNTIDWMK 97
NVE+ L+K+GY PP S A SAI Q+ GIN TG +D +T + +
Sbjct: 370 NVEILKAHLEKFGYTPPG----STFGEANLNYTSAILDFQEHGGINQTGILDADTAELLS 537
Query: 98 KPRCGVPDQTRGSSKFNIRRKRYALTGQKW-QHKHIAYSIKNVTPKVGDAETRKAIRRAF 156
PRCGVPD + + W +++ + YS +T + + + IRRAF
Sbjct: 538 TPRCGVPDVLP-----------FVTSSITWSRNQPVTYSFGALTSDLNQNDVKDEIRRAF 684
Query: 157 DVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGI 216
VW +V+ L+F EVP VDI I F S HGD FDG GG LAHA+ P
Sbjct: 685 RVWDDVSGLSFREVP------DTTSVDIRIKFGSYDHGDGISFDGRGGVLAHAFLPR--- 837
Query: 217 GGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNF 276
GD HFD E WT G G +LF VA HE GH+LGL HS +A+M P+YQ NF
Sbjct: 838 NGDAHFDDSETWTEGT--RSGTNLFQVAAHEFGHSLGLYHSTVRSALMYPYYQGY-VPNF 1008
Query: 277 KLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXS 336
+L NDD+ GI+ +YG R+ S
Sbjct: 1009RLDNDDIAGIRSLYGSNSGSGTTTTTRRPTTT-RATTTRRTTTTRATTTRATTTTTTSPS 1185
Query: 337 YPGAKPNICDGNFNTLV-ILRREMFVFKDQWFWRVR---------NNRVMDGYPMQI--- 383
P C G+F+ +V ++ +FW++ +NR G P I
Sbjct: 1186RPSPPRRACSGSFDAVVRDSSNRIYALTGPYFWQLDQPSPSWGLVSNRFGFGLPQNIDAS 1365
Query: 384 ------TYF------------------------WRGLPPSIDAVYENSEGNFVFFKSNKF 413
TYF W GLP +IDAVY +S G FFK +
Sbjct: 1366FQRGVVTYFFSECYYYYQTSTQRNFPRIPVNRKWVGLPCNIDAVYRSSRGPTYFFKDSFV 1545
Query: 414 WVFKDTTLQPGYPHDLITLGSGIPS--HGIDSAIWWEDVGKTYFFKGDRYWR---YGEEM 468
+ F + +L + +PS H A+ D +F++ RY+R YG +
Sbjct: 1546YKFNSNNRLQRRTR-ISSLFNDVPSALHDGVEAVVRADRNYIHFYRDGRYYRMTDYGRQF 1722
Query: 469 RSMDPGYPKPITIWKGIPESPQGAFVHKENG 499
+ G P I IP+ + ++ G
Sbjct: 1723VNFPNGLPYSDVIESVIPQCRGRSLSYESEG 1815
>emb|AL121753.30|HSDJ614O4 Human DNA sequence from clone RP4-614O4 on chromosome 20q11.1-12
Contains the 3' part of the MMP24 gene for matrix
metalloproteinase 24 (membrane-inserted), the ITGB4BP gene
for integrin beta 4 binding protein, a novel gene similar
to a metalloproteina>
Length = 150481
Score = 188 bits (477), Expect = 2e-45
Identities = 84/103 (81%), Positives = 93/103 (89%)
Frame = +2
Query: 135 SIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHG 194
SI N TPKVG+ +TRKAIR+AFDVWQ VTPLTFEEVPY E+++ +++ DI I FASGFHG
Sbjct: 63923 SIHNYTPKVGELDTRKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHG 64102
Query: 195 DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDG 237
DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN NHDG
Sbjct: 64103 DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNANHDG 64231
Score = 145 bits (367), Expect = 9e-33
Identities = 60/87 (68%), Positives = 74/87 (84%)
Frame = +2
Query: 411 NKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRS 470
+K+WVFK+ T++PGYPH L LGS +P GID+A+ WE VGKTYFFKG+RYWRY EE R+
Sbjct: 81044 DKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTYFFKGERYWRYSEERRA 81223
Query: 471 MDPGYPKPITIWKGIPESPQGAFVHKE 497
DPGYPKPIT+WKGIP++PQGAF+ KE
Sbjct: 81224 TDPGYPKPITVWKGIPQAPQGAFISKE 81304
Score = 120 bits (301), Expect = 4e-25
Identities = 57/111 (51%), Positives = 81/111 (72%), Gaps = 2/111 (1%)
Frame = +2
Query: 500 FTYFIKEKSTGN-STKMLRVEPGYPRSILKDFMGCDGP-TDRDKDRHSPQDDVDIIIKLD 557
+TYF K + + L VEPGYPR+IL+D+MGC+ +R K+R PQDDVDI++ ++
Sbjct: 83747 YTYFYKGRDYWKFDNQKLSVEPGYPRNILRDWMGCNQKEVERRKERRLPQDDVDIMVTIN 83926
Query: 558 NTASTVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
+ +V A+A+VIPCIL+LC+LVLVYT+FQFK + P+ + Y KR +QEWV
Sbjct: 83927 DVPGSVNAVAVVIPCILSLCILVLVYTIFQFKNKTGPQPVTYYKRPVQEWV 84079
Score = 110 bits (274), Expect = 5e-22
Identities = 51/55 (92%), Positives = 53/55 (95%)
Frame = +2
Query: 237 GNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
GNDLFLVAVHELGHALGLEHS+DP+AIMAPFYQYMET NFKLP DDLQGIQKIYG
Sbjct: 73265 GNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHNFKLPQDDLQGIQKIYG 73429
Score = 83.2 bits (204), Expect = 7e-14
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = +3
Query: 363 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSN 411
+D+WFWR+RNNRV +GYPMQI FW+GLP IDA YE ++G FVFFK N
Sbjct: 79230 QDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDAAYERADGRFVFFKGN 79376
Score = 63.2 bits (152), Expect = 7e-08
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTID 94
WL+ YGYL P D R S L SA+ +QSA++ MQQFYGI +TG +D+ TI+
Sbjct: 56318 WLKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIE 56464
Score = 58.9 bits (141), Expect = 1e-06
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +1
Query: 95 WMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAY 134
WMKKPRCGVPD S + R KRYALTGQKW+ KHI Y
Sbjct: 61381 WMKKPRCGVPDHPHLSRRR--RNKRYALTGQKWRQKHITY 61494
Score = 50.1 bits (118), Expect = 6e-04
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +3
Query: 336 SYPGAKPNICDGNFNTLVILRREMFVFK 363
S PG KPNICDGNFNT+ + R EMFVFK
Sbjct: 76809 STPGTKPNICDGNFNTVALFRGEMFVFK 76892
>gb|U65656.1|RNU65656 Rattus norvegicus gelatinase A mRNA, complete cds
Length = 3053
Score = 186 bits (473), Expect = 4e-45
Identities = 117/322 (36%), Positives = 156/322 (48%), Gaps = 8/322 (2%)
Frame = +1
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
T++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1426 TNYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLS 1593
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
NDD++GIQ++YG ++ P
Sbjct: 1594 NDDIKGIQELYGPSPDADTDTGTGPTP----TLGPVT----------------------- 1692
Query: 340 AKPNIC--DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 397
P IC D F+ + +R E+F FKD++ WR R P+ + FW LP IDAV
Sbjct: 1693 --PEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEKIDAV 1866
Query: 398 YEN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YE E VFF N++WV+ +TL+ GYP L +LG +D+A W KTY F
Sbjct: 1867 YEAPQEEKAVFFAGNEYWVYSASTLERGYPKPLTSLGLPPDVQQVDAAFNWSKNKKTYIF 2046
Query: 457 KGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE----KSTGN 511
GD++WRY E + MDPG+PK I W IP++ + G +YF K K
Sbjct: 2047 SGDKFWRYNEVKKKMDPGFPKLIADSWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQ 2226
Query: 512 STKMLRVEPGYPRSILKDFMGC 533
S K ++ SI D++GC
Sbjct: 2227 SLKSVKF-----GSIKSDWLGC 2277
Score = 129 bits (325), Expect = 6e-28
Identities = 68/163 (41%), Positives = 91/163 (55%)
Frame = +1
Query: 69 MQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ + MQ+F+G+ TG +D+NTI+ M+KPRCG PD + +N ++ KW
Sbjct: 499 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 651
Query: 129 HKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIF 188
I Y I TP + A RA VW +VTPL F + +G + DI I F
Sbjct: 652 KNQITYRIIGYTPDLDPETVDDAFARALKVWSDVTPLRFSRI-----HDG--EADIMINF 810
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 811 GRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 939
>gb|AY037943.1| Xenopus laevis matrix metalloproteinase mRNA, complete cds
Length = 2829
Score = 186 bits (472), Expect = 6e-45
Identities = 112/307 (36%), Positives = 154/307 (49%), Gaps = 8/307 (2%)
Frame = +2
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
+++D D W G G LFLVA HE GHALGLEHS DP A+MAP Y Y++ NF+L
Sbjct: 1238 SNYDDDRKW--GFCPDQGYSLFLVAAHEFGHALGLEHSQDPGALMAPIYTYIK--NFRLS 1405
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
DD+ GIQ++YG IP +
Sbjct: 1406 QDDITGIQELYGQGSKEKPGPG---------PIP----------------------TMGP 1492
Query: 340 AKPNIC--DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 397
P++C D + + +R E F FKD++ WR N R P+ I FW LP IDAV
Sbjct: 1493 VTPDLCSKDVVLDGMSQIRGETFFFKDRFIWRTPNIRNKPSGPLLIATFWPELPDKIDAV 1672
Query: 398 YEN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YE E VFF N++WV+ +TL+ GYP L +LG +D+A W KTYFF
Sbjct: 1673 YEEPQEEKTVFFAGNEYWVYSSSTLERGYPKKLTSLGLPPDVDRVDAAFNWSKNKKTYFF 1852
Query: 457 KGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE----KSTGN 511
GD++WRY E + MD G+PK I W G+P++ +G++YF K+ + G
Sbjct: 1853 AGDKFWRYNEVKKKMDTGFPKLIADAWNGVPDNLDAVLDQTGSGYSYFFKDWYYFQVEGK 2032
Query: 512 STKMLRV 518
S K+++V
Sbjct: 2033 SVKIVKV 2053
Score = 133 bits (335), Expect = 4e-29
Identities = 70/163 (42%), Positives = 92/163 (55%)
Frame = +2
Query: 69 MQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ A+ MQ F+G+ TG+ D+NTI+ MKKPRCG PD + +N ++ KW
Sbjct: 311 LKDALKKMQSFFGLPETGEFDQNTIETMKKPRCGNPDV----ANYNFFPRK-----PKWD 463
Query: 129 HKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIF 188
H+ Y I T + A RAF VW +VTPL F + +G + DI I F
Sbjct: 464 KNHLTYRILGYTTDLDSETVDDAFARAFKVWSDVTPLEFNRI-----HDG--EADIMINF 622
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 623 GRWEHGDGYPFDGKDGLLAHAFAPGSGVGGDSHFDDDELWTLG 751
>ref|NM_008610.1| Mus musculus matrix metalloproteinase 2 (Mmp2), mRNA
Length = 2800
Score = 184 bits (467), Expect = 2e-44
Identities = 116/322 (36%), Positives = 156/322 (48%), Gaps = 8/322 (2%)
Frame = +2
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
T++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1178 TNYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLS 1345
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
+DD++GIQ++YG ++ P
Sbjct: 1346 HDDIKGIQELYGPSPDADTDTGTGPTP----TLGPVT----------------------- 1444
Query: 340 AKPNIC--DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 397
P IC D F+ + +R E+F FKD++ WR R P+ + FW LP IDAV
Sbjct: 1445 --PEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEKIDAV 1618
Query: 398 YEN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YE E VFF N++WV+ +TL+ GYP L +LG +D+A W KTY F
Sbjct: 1619 YEAPQEEKAVFFAGNEYWVYSASTLERGYPKPLTSLGLPPDVQQVDAAFNWSKNKKTYIF 1798
Query: 457 KGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE----KSTGN 511
GD++WRY E + MDPG+PK I W IP++ + G +YF K K
Sbjct: 1799 AGDKFWRYNEVKKKMDPGFPKLIADSWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQ 1978
Query: 512 STKMLRVEPGYPRSILKDFMGC 533
S K ++ SI D++GC
Sbjct: 1979 SLKSVKF-----GSIKSDWLGC 2029
Score = 129 bits (325), Expect = 6e-28
Identities = 68/163 (41%), Positives = 91/163 (55%)
Frame = +2
Query: 69 MQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ + MQ+F+G+ TG +D+NTI+ M+KPRCG PD + +N ++ KW
Sbjct: 251 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 403
Query: 129 HKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIF 188
I Y I TP + A RA VW +VTPL F + +G + DI I F
Sbjct: 404 KNQITYRIIGYTPDLDPETVDDAFARALKVWSDVTPLRFSRI-----HDG--EADIMINF 562
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 563 GRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 691
>gb|M84324.1|MUSIVCOL Mus musculus type IV collagenase mRNA, complete cds
Length = 2800
Score = 184 bits (467), Expect = 2e-44
Identities = 116/322 (36%), Positives = 156/322 (48%), Gaps = 8/322 (2%)
Frame = +2
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
T++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1178 TNYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLS 1345
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
+DD++GIQ++YG ++ P
Sbjct: 1346 HDDIKGIQELYGPSPDADTDTGTGPTP----TLGPVT----------------------- 1444
Query: 340 AKPNIC--DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 397
P IC D F+ + +R E+F FKD++ WR R P+ + FW LP IDAV
Sbjct: 1445 --PEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEKIDAV 1618
Query: 398 YEN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YE E VFF N++WV+ +TL+ GYP L +LG +D+A W KTY F
Sbjct: 1619 YEAPQEEKAVFFAGNEYWVYSASTLERGYPKPLTSLGLPPDVQQVDAAFNWSKNKKTYIF 1798
Query: 457 KGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE----KSTGN 511
GD++WRY E + MDPG+PK I W IP++ + G +YF K K
Sbjct: 1799 AGDKFWRYNEVKKKMDPGFPKLIADSWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQ 1978
Query: 512 STKMLRVEPGYPRSILKDFMGC 533
S K ++ SI D++GC
Sbjct: 1979 SLKSVKF-----GSIKSDWLGC 2029
Score = 129 bits (325), Expect = 6e-28
Identities = 68/163 (41%), Positives = 91/163 (55%)
Frame = +2
Query: 69 MQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ + MQ+F+G+ TG +D+NTI+ M+KPRCG PD + +N ++ KW
Sbjct: 251 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 403
Query: 129 HKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIF 188
I Y I TP + A RA VW +VTPL F + +G + DI I F
Sbjct: 404 KNQITYRIIGYTPDLDPETVDDAFARALKVWSDVTPLRFSRI-----HDG--EADIMINF 562
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 563 GRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 691
>dbj|AB021698.1|AB021698 Oncorhynchus mykiss mRNA for matrix metalloproteinase-2, complete cds
Length = 3035
Score = 184 bits (467), Expect = 2e-44
Identities = 118/329 (35%), Positives = 161/329 (48%), Gaps = 8/329 (2%)
Frame = +3
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
+D D W G G LFLVA HE GHALGLEHS DP A+MAP Y + T NF+L ND
Sbjct: 1260 YDDDRKW--GFCPDQGYSLFLVAAHEFGHALGLEHSQDPGALMAPMYTF--TKNFRLSND 1427
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK 341
D++GIQ++YG + +PP P
Sbjct: 1428 DIKGIQELYGAGTD--------------KPVPPTQG--------------------PVTP 1505
Query: 342 PNICDGN--FNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
+IC+ F+ + +R E F FKD++ +R N R PM + +W LP +IDA YE
Sbjct: 1506 MDICNEPVVFDAVAQIRGETFFFKDRFIFRSTNFRGKPSGPMLVATYWPELPVTIDAAYE 1685
Query: 400 NS-EGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
N E VFF N+ W+F ++ GYP + ++G GID+A + KTY F G
Sbjct: 1686 NPLEEKTVFFAGNEMWIFNADQIEKGYPKRISSIGLPTDLKGIDAAFSFGKSQKTYLFAG 1865
Query: 459 DRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE----KSTGNST 513
D++WRY E + MD G+PK I W GIP+ AF +TYF K K +S
Sbjct: 1866 DQFWRYNEAKKKMDLGFPKLIADSWNGIPDGIDSAFSLNGIDYTYFFKGAHYFKMDDSSL 2045
Query: 514 KMLRVEPGYPRSILKDFMGCDGPTDRDKD 542
K++++ I KD++GC T R D
Sbjct: 2046 KIVKL-----GEITKDWLGCH*ATVRRID 2117
Score = 134 bits (337), Expect = 3e-29
Identities = 70/163 (42%), Positives = 94/163 (56%)
Frame = +3
Query: 69 MQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ + MQ+F+ + TG++D T++ MKKPRCGVPD +++N ++ KWQ
Sbjct: 327 LKDTLKKMQKFFSLQETGEIDPKTVEIMKKPRCGVPDV----AQYNFFHRK-----PKWQ 479
Query: 129 HKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIF 188
I Y I +P + + A RAF VW +VTPL F L +G + DI I F
Sbjct: 480 QNAITYRILGHSPDLDEETIDDAFLRAFKVWSDVTPLKFTR-----LMDG--EADIMINF 638
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PGPG GGD+HFD DE WTLG
Sbjct: 639 GRNEHGDGYPFDGKDGLLAHAFAPGPGTGGDSHFDDDEQWTLG 767
>ref|NM_031054.1| Rattus norvegicus matrix metalloproteinase 2 (72 KDa type IV
collagenase) (Mmp2), mRNA
Length = 3231
Score = 184 bits (467), Expect = 2e-44
Identities = 116/322 (36%), Positives = 156/322 (48%), Gaps = 8/322 (2%)
Frame = +3
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
T++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1608 TNYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLS 1775
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
+DD++GIQ++YG ++ P
Sbjct: 1776 HDDIKGIQELYGPSPDADTDTGTGPTP----TLGPVT----------------------- 1874
Query: 340 AKPNIC--DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 397
P IC D F+ + +R E+F FKD++ WR R P+ + FW LP IDAV
Sbjct: 1875 --PEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEKIDAV 2048
Query: 398 YEN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YE E VFF N++WV+ +TL+ GYP L +LG +D+A W KTY F
Sbjct: 2049 YEAPQEEKAVFFAGNEYWVYSASTLERGYPKPLTSLGLPPDVQQVDAAFNWSKNKKTYIF 2228
Query: 457 KGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE----KSTGN 511
GD++WRY E + MDPG+PK I W IP++ + G +YF K K
Sbjct: 2229 AGDKFWRYNEVKKKMDPGFPKLIADSWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQ 2408
Query: 512 STKMLRVEPGYPRSILKDFMGC 533
S K ++ SI D++GC
Sbjct: 2409 SLKSVKF-----GSIKSDWLGC 2459
Score = 129 bits (325), Expect = 6e-28
Identities = 68/163 (41%), Positives = 91/163 (55%)
Frame = +3
Query: 69 MQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ + MQ+F+G+ TG +D+NTI+ M+KPRCG PD + +N ++ KW
Sbjct: 681 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 833
Query: 129 HKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIF 188
I Y I TP + A RA VW +VTPL F + +G + DI I F
Sbjct: 834 KNQITYRIIGYTPDLDPETVDDAFARALKVWSDVTPLRFSRI-----HDG--EADIMINF 992
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 993 GRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 1121
>emb|X71466.1|RNCOLL R. Norvegicus mRNA for 72 KDa type IV collagenase
Length = 3231
Score = 184 bits (467), Expect = 2e-44
Identities = 116/322 (36%), Positives = 156/322 (48%), Gaps = 8/322 (2%)
Frame = +3
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
T++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1608 TNYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLS 1775
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
+DD++GIQ++YG ++ P
Sbjct: 1776 HDDIKGIQELYGPSPDADTDTGTGPTP----TLGPVT----------------------- 1874
Query: 340 AKPNIC--DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 397
P IC D F+ + +R E+F FKD++ WR R P+ + FW LP IDAV
Sbjct: 1875 --PEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEKIDAV 2048
Query: 398 YEN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YE E VFF N++WV+ +TL+ GYP L +LG +D+A W KTY F
Sbjct: 2049 YEAPQEEKAVFFAGNEYWVYSASTLERGYPKPLTSLGLPPDVQQVDAAFNWSKNKKTYIF 2228
Query: 457 KGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE----KSTGN 511
GD++WRY E + MDPG+PK I W IP++ + G +YF K K
Sbjct: 2229 AGDKFWRYNEVKKKMDPGFPKLIADSWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQ 2408
Query: 512 STKMLRVEPGYPRSILKDFMGC 533
S K ++ SI D++GC
Sbjct: 2409 SLKSVKF-----GSIKSDWLGC 2459
Score = 129 bits (325), Expect = 6e-28
Identities = 68/163 (41%), Positives = 91/163 (55%)
Frame = +3
Query: 69 MQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ + MQ+F+G+ TG +D+NTI+ M+KPRCG PD + +N ++ KW
Sbjct: 681 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 833
Query: 129 HKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIF 188
I Y I TP + A RA VW +VTPL F + +G + DI I F
Sbjct: 834 KNQITYRIIGYTPDLDPETVDDAFARALKVWSDVTPLRFSRI-----HDG--EADIMINF 992
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 993 GRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 1121
>dbj|AB031323.1|AB031323 Sus scrofa mRNA for matrilysin, complete cds
Length = 968
Score = 184 bits (466), Expect = 3e-44
Identities = 99/248 (39%), Positives = 139/248 (55%), Gaps = 2/248 (0%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q GYL P S + A ++++ + MQ+F+ + +TG ++ + I M+KPRCGVPD
Sbjct: 102 WEQAQGYLKKFYPSNSKTKDANSLEAKLKQMQKFFRLPITGMLNSHIIKIMQKPRCGVPD 281
Query: 106 QTRGSSKFNIRRKRYAL--TGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVT 163
Y+L + KW K + Y I + T + + + +A +W N
Sbjct: 282 VAE-----------YSLFPSQPKWTSKIVTYRIVSYTRDLPHVTVNQLVTKALKMWSNEI 428
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PL+F++V + DI I FA G HGD+ PFDG G LAHA+ PGPG+GGD HFD
Sbjct: 429 PLSFKKVSW-------GIADIIIGFARGAHGDAYPFDGPGNTLAHAFAPGPGLGGDAHFD 587
Query: 224 SDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDL 283
DE W+ G G + A HELGH+LGL HS+DP A+M P Y + + +FKL DD+
Sbjct: 588 EDEHWSDG--GSIGINFLYAATHELGHSLGLAHSSDPNAVMYPTYGEVYSKDFKLSQDDI 761
Query: 284 QGIQKIYG 291
GIQK+YG
Sbjct: 762 NGIQKLYG 785
>gb|AF290428.1|AF290428 Bos taurus matrix metalloprotease 2 mRNA, complete cds
Length = 2350
Score = 184 bits (466), Expect = 3e-44
Identities = 115/322 (35%), Positives = 157/322 (48%), Gaps = 8/322 (2%)
Frame = +2
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
+++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1319 SNYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLS 1486
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
+DD+QGIQ++YG ++ P
Sbjct: 1487 HDDIQGIQELYGASPDIDTGTGPTP------TLGPVT----------------------- 1579
Query: 340 AKPNIC--DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 397
P +C D F+ + +R E+F FKD++ WR R P+ + FW LP IDAV
Sbjct: 1580 --PELCKQDIVFDGISQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEKIDAV 1753
Query: 398 YEN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YE+ E VFF N++WV+ +TL+ GYP L +LG +D+A W KTY F
Sbjct: 1754 YEDPQEEKAVFFAGNEYWVYSASTLERGYPKPLTSLGLPPGVQKVDAAFNWSKNKKTYIF 1933
Query: 457 KGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE----KSTGN 511
GD++WRY E + MDPG+PK I W IP++ + G +YF K K
Sbjct: 1934 AGDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQ 2113
Query: 512 STKMLRVEPGYPRSILKDFMGC 533
S K ++ SI D++GC
Sbjct: 2114 SLKSVKF-----GSIKSDWLGC 2164
Score = 129 bits (323), Expect = 1e-27
Identities = 68/163 (41%), Positives = 93/163 (56%)
Frame = +2
Query: 69 MQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ + MQ+F+G+ TG++D++TI+ M+KPRCG PD + +N ++ KW
Sbjct: 392 LKDTLKKMQKFFGLPQTGELDQSTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 544
Query: 129 HKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIF 188
I Y I TP + A RAF VW +VTPL F + +G + DI I F
Sbjct: 545 KNQITYRIIGYTPDLDPQTVDDAFARAFQVWSDVTPLRFSRI-----HDG--EADIMINF 703
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PGPG+GGD+HFD DE TLG
Sbjct: 704 GRWEHGDGYPFDGKDGLLAHAFAPGPGVGGDSHFDDDELRTLG 832
>dbj|AB033754.2|AB033754 Oryzias latipes gel-a mRNA for gelatinase A, complete cds
Length = 3019
Score = 182 bits (463), Expect = 6e-44
Identities = 116/320 (36%), Positives = 159/320 (49%), Gaps = 8/320 (2%)
Frame = +1
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
+D D W G G LFLVA HE GHALGLEHS DP A+MAP Y + T +F+LP D
Sbjct: 1240 YDDDRKW--GFCPDQGYSLFLVAAHEFGHALGLEHSQDPGALMAPVYTF--TKDFRLPQD 1407
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK 341
D+QGIQ++YG + +PP P
Sbjct: 1408 DIQGIQELYGVPTD--------------KPLPPTQG--------------------PVTP 1485
Query: 342 PNICDGN--FNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
+IC + F+ + +R E F FKD++ +R N R P+ + +W LP IDA YE
Sbjct: 1486 MDICKESIVFDAVAQIRGETFFFKDRFLFRSVNFRSKPKGPLLVATYWPDLPAKIDAAYE 1665
Query: 400 N-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
N +E VFF N+FWV++ LQ GYP L L ID+A + KTY F G
Sbjct: 1666 NPAEEKTVFFAGNQFWVYRADELQSGYPRRLSNLDLPDDVQRIDAAFNFRRNRKTYLFSG 1845
Query: 459 DRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE----KSTGNST 513
D++WRY E+ ++MDPG+PK I W GIP+ AF ++YF K K N+
Sbjct: 1846 DKFWRYDEDRKTMDPGFPKLIADSWNGIPDDLDSAFSLNGIDYSYFFKGNHYFKLEDNTL 2025
Query: 514 KMLRVEPGYPRSILKDFMGC 533
K++++ I D++GC
Sbjct: 2026 KIVKL-----GEIKTDWLGC 2070
Score = 133 bits (334), Expect = 6e-29
Identities = 69/163 (42%), Positives = 91/163 (55%)
Frame = +1
Query: 69 MQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ + MQ+F+ + TG++D T+ MKKPRCGVPD + +N + KWQ
Sbjct: 307 LKDTLKTMQKFFTLPETGEIDAQTVAIMKKPRCGVPDV----ANYNFFHNK-----PKWQ 459
Query: 129 HKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIF 188
K I Y I +P + + A RAF VW +VTPL+F + + DI I F
Sbjct: 460 KKDITYRILGYSPDLDEEVINDAFYRAFKVWSDVTPLSFTRIM-------DGEADIMINF 618
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PG GIGGD+HFD DE WTLG
Sbjct: 619 GRNEHGDGYPFDGKDGLLAHAFAPGGGIGGDSHFDDDEQWTLG 747
>dbj|D63579.1|RABMM2 Oryctolagus cuniculus mRNA for matrix metalloproteinase-2, complete
cds
Length = 2678
Score = 182 bits (461), Expect = 1e-43
Identities = 115/322 (35%), Positives = 155/322 (47%), Gaps = 8/322 (2%)
Frame = +1
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
T++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1135 TNYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLS 1302
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
DD++GIQ++YG ++ P
Sbjct: 1303 QDDIKGIQELYGASPDAGTDAGTGPTP----TLGPVT----------------------- 1401
Query: 340 AKPNIC--DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 397
P IC D F+ + +R E+F FKD++ WR P+ + FW LP IDAV
Sbjct: 1402 --PEICTQDIVFDGIAQIRGEIFFFKDRFIWRTVTPGDKPMGPLLVATFWPELPEKIDAV 1575
Query: 398 YEN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YE E VFF N++WV+ +TL+ GYP L +LG +D+A W KTY F
Sbjct: 1576 YEAPQEEKAVFFAGNEYWVYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIF 1755
Query: 457 KGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE----KSTGN 511
GD++WRY E + MDPG+P+ I W IP+ + +G +YF K K
Sbjct: 1756 AGDKFWRYNEVKKKMDPGFPRLIADAWNAIPDHLDAVVDLQGSGHSYFFKGTYYLKLENQ 1935
Query: 512 STKMLRVEPGYPRSILKDFMGC 533
S K ++V SI D++GC
Sbjct: 1936 SLKSVKV-----GSIKTDWLGC 1986
Score = 133 bits (334), Expect = 6e-29
Identities = 69/163 (42%), Positives = 93/163 (56%)
Frame = +1
Query: 69 MQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ + MQ+F+G+ TG++D++TI+ M+KPRCG PD + +N ++ KW
Sbjct: 208 LKDTLKKMQKFFGLPQTGELDQSTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 360
Query: 129 HKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIF 188
I Y I TP + A RAF VW NVTPL F + +G + DI I F
Sbjct: 361 KNQITYRIIGYTPDLDPETVDDAFARAFQVWSNVTPLRFSRI-----HDG--EADIMINF 519
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 520 GRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 648
>gb|AF177217.1|AF177217 Canis familiaris matrix metalloproteinase-2 (MMP-2) mRNA, partial cds
Length = 2522
Score = 182 bits (461), Expect = 1e-43
Identities = 115/321 (35%), Positives = 155/321 (47%), Gaps = 8/321 (2%)
Frame = +3
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1056 NYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSEDPGALMAPIYTY--TKNFRLSQ 1223
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD++GIQ++YG ++ P
Sbjct: 1224 DDIKGIQELYGASPDAGTGTGPTP------TLGPVT------------------------ 1313
Query: 341 KPNIC--DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVY 398
P IC D F+ + +R E+F FKD++ WR R P+ + FW LP IDAVY
Sbjct: 1314 -PEICKQDIVFDGISQIRGEIFFFKDRFIWRTVTPRNKPMGPLLVATFWPELPEKIDAVY 1490
Query: 399 EN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFK 457
E E VFF N++WV+ +TL+ GYP L +LG +D+A W KTY F
Sbjct: 1491 EAPQEEKAVFFAGNEYWVYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFA 1670
Query: 458 GDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE----KSTGNS 512
GD++WRY E + MDPG+PK I W IP++ + +G +YF K K S
Sbjct: 1671 GDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGSGHSYFFKGAYYLKLENQS 1850
Query: 513 TKMLRVEPGYPRSILKDFMGC 533
K ++ SI D++GC
Sbjct: 1851 LKSVKF-----GSIKSDWLGC 1898
Score = 134 bits (337), Expect = 3e-29
Identities = 69/163 (42%), Positives = 94/163 (57%)
Frame = +3
Query: 69 MQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ + MQ+F+G+ TG++D++TI+ M+KPRCG PD + +N ++ KW
Sbjct: 126 LKDTLKKMQKFFGLPQTGELDQSTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 278
Query: 129 HKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIF 188
I Y I TP + A RAF VW +VTPL F + +G + DI I F
Sbjct: 279 KNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRI-----HDG--EADIMINF 437
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PGPG+GGD+HFD DE WTLG
Sbjct: 438 GRWEHGDGYPFDGKDGLLAHAFAPGPGVGGDSHFDDDELWTLG 566
>gb|J03210.1|HUMCN4GEL Human collagenase type IV mRNA, 3' end
Length = 2733
Score = 181 bits (459), Expect = 2e-43
Identities = 114/321 (35%), Positives = 154/321 (47%), Gaps = 8/321 (2%)
Frame = +2
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1091 NYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLSQ 1258
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD++GIQ++YG ++ P
Sbjct: 1259 DDIKGIQELYGASPDIDLGTGPTP------TLGPVT------------------------ 1348
Query: 341 KPNIC--DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVY 398
P IC D F+ + +R E+F FKD++ WR R P+ + FW LP IDAVY
Sbjct: 1349 -PEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVY 1525
Query: 399 EN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFK 457
E E VFF N++W++ +TL+ GYP L +LG +D+A W KTY F
Sbjct: 1526 EAPQEEKAVFFAGNEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFA 1705
Query: 458 GDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE----KSTGNS 512
GD++WRY E + MDPG+PK I W IP++ + G +YF K K S
Sbjct: 1706 GDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQS 1885
Query: 513 TKMLRVEPGYPRSILKDFMGC 533
K ++ SI D++GC
Sbjct: 1886 LKSVKF-----GSIKSDWLGC 1933
Score = 132 bits (332), Expect = 1e-28
Identities = 69/163 (42%), Positives = 92/163 (56%)
Frame = +2
Query: 69 MQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ + MQ+F+G+ TG +D+NTI+ M+KPRCG PD + +N ++ KW
Sbjct: 161 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 313
Query: 129 HKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIF 188
I Y I TP + A RAF VW +VTPL F + +G + DI I F
Sbjct: 314 KNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRI-----HDG--EADIMINF 472
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 473 GRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 601
>ref|XM_012503.2| Homo sapiens matrix metalloproteinase 2 (gelatinase A, 72kD
gelatinase, 72kD type IV collagenase) (MMP2), mRNA
Length = 3069
Score = 181 bits (459), Expect = 2e-43
Identities = 114/321 (35%), Positives = 154/321 (47%), Gaps = 8/321 (2%)
Frame = +2
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1427 NYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLSQ 1594
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD++GIQ++YG ++ P
Sbjct: 1595 DDIKGIQELYGASPDIDLGTGPTP------TLGPVT------------------------ 1684
Query: 341 KPNIC--DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVY 398
P IC D F+ + +R E+F FKD++ WR R P+ + FW LP IDAVY
Sbjct: 1685 -PEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVY 1861
Query: 399 EN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFK 457
E E VFF N++W++ +TL+ GYP L +LG +D+A W KTY F
Sbjct: 1862 EAPQEEKAVFFAGNEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFA 2041
Query: 458 GDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE----KSTGNS 512
GD++WRY E + MDPG+PK I W IP++ + G +YF K K S
Sbjct: 2042 GDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQS 2221
Query: 513 TKMLRVEPGYPRSILKDFMGC 533
K ++ SI D++GC
Sbjct: 2222 LKSVKF-----GSIKSDWLGC 2269
Score = 132 bits (332), Expect = 1e-28
Identities = 69/163 (42%), Positives = 92/163 (56%)
Frame = +2
Query: 69 MQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ + MQ+F+G+ TG +D+NTI+ M+KPRCG PD + +N ++ KW
Sbjct: 497 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 649
Query: 129 HKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIF 188
I Y I TP + A RAF VW +VTPL F + +G + DI I F
Sbjct: 650 KNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRI-----HDG--EADIMINF 808
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 809 GRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 937
>ref|NM_004530.1| Homo sapiens matrix metalloproteinase 2 (gelatinase A, 72kD
gelatinase, 72kD type IV collagenase) (MMP2), mRNA
Length = 3069
Score = 181 bits (459), Expect = 2e-43
Identities = 114/321 (35%), Positives = 154/321 (47%), Gaps = 8/321 (2%)
Frame = +2
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1427 NYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLSQ 1594
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD++GIQ++YG ++ P
Sbjct: 1595 DDIKGIQELYGASPDIDLGTGPTP------TLGPVT------------------------ 1684
Query: 341 KPNIC--DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVY 398
P IC D F+ + +R E+F FKD++ WR R P+ + FW LP IDAVY
Sbjct: 1685 -PEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVY 1861
Query: 399 EN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFK 457
E E VFF N++W++ +TL+ GYP L +LG +D+A W KTY F
Sbjct: 1862 EAPQEEKAVFFAGNEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFA 2041
Query: 458 GDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE----KSTGNS 512
GD++WRY E + MDPG+PK I W IP++ + G +YF K K S
Sbjct: 2042 GDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQS 2221
Query: 513 TKMLRVEPGYPRSILKDFMGC 533
K ++ SI D++GC
Sbjct: 2222 LKSVKF-----GSIKSDWLGC 2269
Score = 132 bits (332), Expect = 1e-28
Identities = 69/163 (42%), Positives = 92/163 (56%)
Frame = +2
Query: 69 MQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ + MQ+F+G+ TG +D+NTI+ M+KPRCG PD + +N ++ KW
Sbjct: 497 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 649
Query: 129 HKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIF 188
I Y I TP + A RAF VW +VTPL F + +G + DI I F
Sbjct: 650 KNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRI-----HDG--EADIMINF 808
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 809 GRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 937
>gb|BC002576.1|BC002576 Homo sapiens, matrix metalloproteinase 2 (gelatinase A, 72kD
gelatinase, 72kD type IV collagenase), clone MGC:2313
IMAGE:3161383, mRNA, complete cds
Length = 3074
Score = 181 bits (459), Expect = 2e-43
Identities = 114/321 (35%), Positives = 154/321 (47%), Gaps = 8/321 (2%)
Frame = +3
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1413 NYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLSQ 1580
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD++GIQ++YG ++ P
Sbjct: 1581 DDIKGIQELYGASPDIDLGTGPTP------TLGPVT------------------------ 1670
Query: 341 KPNIC--DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVY 398
P IC D F+ + +R E+F FKD++ WR R P+ + FW LP IDAVY
Sbjct: 1671 -PEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVY 1847
Query: 399 EN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFK 457
E E VFF N++W++ +TL+ GYP L +LG +D+A W KTY F
Sbjct: 1848 EAPQEEKAVFFAGNEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFA 2027
Query: 458 GDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE----KSTGNS 512
GD++WRY E + MDPG+PK I W IP++ + G +YF K K S
Sbjct: 2028 GDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQS 2207
Query: 513 TKMLRVEPGYPRSILKDFMGC 533
K ++ SI D++GC
Sbjct: 2208 LKSVKF-----GSIKSDWLGC 2255
Score = 132 bits (332), Expect = 1e-28
Identities = 69/163 (42%), Positives = 92/163 (56%)
Frame = +3
Query: 69 MQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ + MQ+F+G+ TG +D+NTI+ M+KPRCG PD + +N ++ KW
Sbjct: 483 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 635
Query: 129 HKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIF 188
I Y I TP + A RAF VW +VTPL F + +G + DI I F
Sbjct: 636 KNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRI-----HDG--EADIMINF 794
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 795 GRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 923
>gb|U07775.1|GGU07775 Gallus gallus prepro-72kDa matrix metalloproteinase (MMP-2) mRNA,
complete cds
Length = 3073
Score = 179 bits (454), Expect = 7e-43
Identities = 111/320 (34%), Positives = 155/320 (47%), Gaps = 8/320 (2%)
Frame = +3
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
+D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L D
Sbjct: 1263 YDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSEDPGALMAPIYTY--TKNFRLSQD 1430
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK 341
D++GIQ++Y ++ P
Sbjct: 1431 DIKGIQELYEVSPDVEPGPGPGPGPGPRPTLGPVT------------------------- 1535
Query: 342 PNIC--DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
P +C D F+ + +R E+F FKD++ WR N R P+ + FW LP IDAVYE
Sbjct: 1536 PELCKHDIVFDGVAQIRGEIFFFKDRFMWRTVNPRGKPTGPLLVATFWPDLPEKIDAVYE 1715
Query: 400 NSEGN-FVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
+ + VFF N++WV+ + L GYP L +LG ID+A W KTY F G
Sbjct: 1716 SPQDEKAVFFAGNEYWVYTASNLDRGYPKKLTSLGLPPDVQRIDAAFNWGRNKKTYIFSG 1895
Query: 459 DRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE----KSTGNST 513
DRYW+Y EE + M+ PK I W G+P++ ++G+TYF K+ + S
Sbjct: 1896 DRYWKYNEEKKKMELATPKFIADSWNGVPDNLDAVLGLTDSGYTYFFKDQYYLQMEDKSL 2075
Query: 514 KMLRVEPGYPRSILKDFMGC 533
K++++ I D++GC
Sbjct: 2076 KIVKI-----GKISSDWLGC 2120
Score = 141 bits (356), Expect = 2e-31
Identities = 78/186 (41%), Positives = 101/186 (53%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L KY P + + VL+ + MQ+F+G+ TG +D+NTI+ MKKPRCG PD
Sbjct: 279 YLNKYYGCPKDNCNLFVLKDT------LKKMQKFFGLPETGDLDQNTIETMKKPRCGNPD 440
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
+ +N ++ KW+ HI Y I TP + A RAF VW +VTPL
Sbjct: 441 V----ANYNFFPRK-----PKWEKNHITYRIIGYTPDLDPETVDDAFARAFKVWSDVTPL 593
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
F + + DI I F HGD PFDG+ G LAHA+ PGPGIGGD+HFD D
Sbjct: 594 RFNRI-------NDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGIGGDSHFDDD 752
Query: 226 EPWTLG 231
E WTLG
Sbjct: 753 ELWTLG 770
>gb|BC003635.1|BC003635 Homo sapiens, matrix metalloproteinase 7 (matrilysin, uterine),
clone MGC:3913 IMAGE:3545760, mRNA, complete cds
Length = 1140
Score = 178 bits (452), Expect = 1e-42
Identities = 98/246 (39%), Positives = 136/246 (54%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL S ++A ++++ + MQ+F+G+ +TG ++ + I+ M+KPRCGVPD
Sbjct: 134 WEQAQDYLKRFYLYDSETKNANSLEAKLKEMQKFFGLPITGMLNSHVIEIMQKPRCGVPD 313
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
S N KW K + Y I + T + + + +A ++W PL
Sbjct: 314 VAEYSLFPN---------SPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPL 466
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
F +V + DI I FA G HGDS PFDG G LAHA+ PG G+GGD HFD D
Sbjct: 467 HFRKVVW-------GTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDED 625
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
E WT G+ G + A HELGH+LG+ HS+DP A+M P Y + NFKL DD++G
Sbjct: 626 ERWTDGSSL--GINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKG 799
Query: 286 IQKIYG 291
IQK+YG
Sbjct: 800 IQKLYG 817
>ref|NM_002423.2| Homo sapiens matrix metalloproteinase 7 (matrilysin, uterine)
(MMP7), mRNA
Length = 1127
Score = 178 bits (451), Expect = 2e-42
Identities = 98/246 (39%), Positives = 135/246 (54%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL S ++A ++++ + MQ+F+G+ +TG ++ I+ M+KPRCGVPD
Sbjct: 141 WEQAQDYLKRFYLYDSETKNANSLEAKLKEMQKFFGLPITGMLNSRVIEIMQKPRCGVPD 320
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
S N KW K + Y I + T + + + +A ++W PL
Sbjct: 321 VAEYSLFPN---------SPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPL 473
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
F +V + DI I FA G HGDS PFDG G LAHA+ PG G+GGD HFD D
Sbjct: 474 HFRKVVW-------GTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDED 632
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
E WT G+ G + A HELGH+LG+ HS+DP A+M P Y + NFKL DD++G
Sbjct: 633 ERWTDGSSL--GINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKG 806
Query: 286 IQKIYG 291
IQK+YG
Sbjct: 807 IQKLYG 824
>emb|X07819.1|HSPUMP1 Human pump-1 mRNA homolog. to metalloproteinase, collagenase and
stromelysin
Length = 1078
Score = 178 bits (451), Expect = 2e-42
Identities = 98/246 (39%), Positives = 135/246 (54%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL S ++A ++++ + MQ+F+G+ +TG ++ I+ M+KPRCGVPD
Sbjct: 121 WEQAQDYLKRFYLYDSETKNANSLEAKLKEMQKFFGLPITGMLNSRVIEIMQKPRCGVPD 300
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
S N KW K + Y I + T + + + +A ++W PL
Sbjct: 301 VAEYSLFPN---------SPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPL 453
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
F +V + DI I FA G HGDS PFDG G LAHA+ PG G+GGD HFD D
Sbjct: 454 HFRKVVW-------GTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDED 612
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
E WT G+ G + A HELGH+LG+ HS+DP A+M P Y + NFKL DD++G
Sbjct: 613 ERWTDGSSL--GINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKG 786
Query: 286 IQKIYG 291
IQK+YG
Sbjct: 787 IQKLYG 804
>emb|Z11887.1|HSPUMP1G H.sapiens PUMP-1 gene encoding PUMP
Length = 1132
Score = 178 bits (451), Expect = 2e-42
Identities = 98/246 (39%), Positives = 135/246 (54%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL S ++A ++++ + MQ+F+G+ +TG ++ I+ M+KPRCGVPD
Sbjct: 121 WEQAQDYLKRFYLYDSETKNANSLEAKLKEMQKFFGLPITGMLNSRVIEIMQKPRCGVPD 300
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
S N KW K + Y I + T + + + +A ++W PL
Sbjct: 301 VAEYSLFPN---------SPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPL 453
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
F +V + DI I FA G HGDS PFDG G LAHA+ PG G+GGD HFD D
Sbjct: 454 HFRKVVW-------GTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDED 612
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
E WT G+ G + A HELGH+LG+ HS+DP A+M P Y + NFKL DD++G
Sbjct: 613 ERWTDGSSL--GINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKG 786
Query: 286 IQKIYG 291
IQK+YG
Sbjct: 787 IQKLYG 804
>gb|AF295805.1|AF295805 Sus scrofa gelatinase A (MMP-2) mRNA, complete cds
Length = 2857
Score = 175 bits (443), Expect = 1e-41
Identities = 114/321 (35%), Positives = 152/321 (46%), Gaps = 8/321 (2%)
Frame = +1
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L +
Sbjct: 1189 NYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSEDPGALMAPIYTY--TKNFRLSH 1356
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD++GIQ++YG ++ P
Sbjct: 1357 DDVKGIQELYGASPDIDTGTGPTP------TLGPVT------------------------ 1446
Query: 341 KPNIC--DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVY 398
P IC D F+ + +R E+F FKD++ WR R FW LP IDAVY
Sbjct: 1447 -PEICKQDIVFDGISQIRGEIFFFKDRFIWRTVTPRDKPMVAPAGATFWPELPEKIDAVY 1623
Query: 399 EN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFK 457
E E VFF N++WV+ +TL+ GYP L +LG +D+A W KTY F
Sbjct: 1624 EAPQEEKAVFFAGNEYWVYSASTLERGYPKPLTSLGLPPDVQKVDAAFNWSKNKKTYIFA 1803
Query: 458 GDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE----KSTGNS 512
GD++WRY E + MDPG+PK I W IP++ + G +YF K K S
Sbjct: 1804 GDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQS 1983
Query: 513 TKMLRVEPGYPRSILKDFMGC 533
K ++ SI D++GC
Sbjct: 1984 LKSVKF-----GSIKSDWLGC 2031
Score = 133 bits (334), Expect = 6e-29
Identities = 69/163 (42%), Positives = 94/163 (57%)
Frame = +1
Query: 69 MQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ + MQ+F+G+ TG++D++TI+ M+KPRCG PD + +N ++ KW
Sbjct: 259 LKDTLKKMQKFFGLPQTGELDQSTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 411
Query: 129 HKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIF 188
I Y I TP + A RAF VW +VTPL F + +G + DI I F
Sbjct: 412 KTQITYRIIGYTPDLDPETVDDAFARAFRVWSDVTPLRFSRI-----HDG--EADIMINF 570
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PGPG+GGD+HFD DE WTLG
Sbjct: 571 GRWEHGDGYPFDGKDGLLAHAFAPGPGVGGDSHFDDDELWTLG 699
>dbj|AB000719.1|AB000719 Hemicentrotus pulcherrimus mRNA for hatching enzyme, complete cds
Length = 2463
Score = 174 bits (441), Expect = 2e-41
Identities = 129/423 (30%), Positives = 193/423 (45%), Gaps = 5/423 (1%)
Frame = +1
Query: 47 LQKYGYLPPTDPRMSVLRSAE-TMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
L+++GY+P S A SAI QQ GIN TG +D T + PRCGVPD
Sbjct: 373 LEQFGYVPLG----STFGEANINYTSAILEYQQNGGINQTGILDAETAALLDTPRCGVPD 540
Query: 106 QTRGSSKFNIRRKRYALTGQKW-QHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTP 164
Y G W ++ + YS ++ + + +RRAF VW +V+
Sbjct: 541 ILP-----------YVTGGIAWPRNVAVTYSFGTLSNDLSQTAIKNELRRAFQVWDDVSS 687
Query: 165 LTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDS 224
LTF EV VDI I F S HGD FDG+GG LAHA+ P GD HFD
Sbjct: 688 LTFREVV------DSSSVDIRIKFGSYEHGDGISFDGQGGVLAHAFLPR---NGDAHFDD 840
Query: 225 DEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQ 284
E WT+G + G +LF VA HE GH+LGL HS+ +A+M P+Y+ NF L DD+
Sbjct: 841 SERWTIGT--NSGTNLFQVAAHEFGHSLGLYHSDVQSALMYPYYRGY-NPNFNLDRDDIA 1011
Query: 285 GIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNI 344
GI +YG + +YP
Sbjct: 1012GITSLYG-RNTGSTTTTTRRPTITRTTTRRTTTRRTTTQLATTQTTTIRPPTYPTPPRQA 1188
Query: 345 CDGNFNTLVILRRE-MFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEG 403
C G+F+ ++ + ++ +++WR+ ++ + + F LP ++DA ++N G
Sbjct: 1189CTGSFDAVIKDNSDRIYALAGRYYWRL--DQASPSWGVVRNRFGFDLPENVDASFQN--G 1356
Query: 404 NFVFFKSNKFWVFKDTTLQ--PGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRY 461
F +F S ++ ++ +T + P P + + G+P ID+ D G TYFFKG
Sbjct: 1357IFSYFFSGCYYYYQTSTRRRFPRTPFNRRWV--GLPC-DIDAVYKSGDSGTTYFFKGRFV 1527
Query: 462 WRY 464
+++
Sbjct: 1528YKF 1536
>ref|NM_012864.1| Rattus norvegicus Matrix metalloproteinase 7 (matrilysin) (Mmp7),
mRNA
Length = 1057
Score = 173 bits (439), Expect = 4e-41
Identities = 96/246 (39%), Positives = 131/246 (53%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL S + A + + MQ+F+G+ TGK+ ++ M+KPRCGVPD
Sbjct: 136 WEQAQNYLRKFYLHDSKTKKATSAVDKLREMQKFFGLPETGKLSPRVMEIMQKPRCGVPD 315
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
S N KW + + Y I + T + + ++RA +W PL
Sbjct: 316 VAEFSLMPN---------SPKWHSRTVTYRIVSYTTDLPRFLVDQIVKRALRMWSMQIPL 468
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
F+ V + DI I FA G HGD+ PFDG G L HA+ PGPG+GGD HFD D
Sbjct: 469 NFKRVSW-------GTADIIIGFARGDHGDNFPFDGPGNTLGHAFAPGPGLGGDAHFDKD 627
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
E WT G + G + VA HELGH+LGL HS+ P+++M P YQ +++F L DD+ G
Sbjct: 628 EYWTDGEDS--GVNFLFVATHELGHSLGLGHSSVPSSVMYPTYQGDHSEDFSLTKDDIAG 801
Query: 286 IQKIYG 291
IQK+YG
Sbjct: 802 IQKLYG 819
>gb|L24374.1|RATMPMM Rattus norvegicus matrilysin (MMP-7) mRNA, complete cds
Length = 1057
Score = 173 bits (439), Expect = 4e-41
Identities = 96/246 (39%), Positives = 131/246 (53%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL S + A + + MQ+F+G+ TGK+ ++ M+KPRCGVPD
Sbjct: 136 WEQAQNYLRKFYLHDSKTKKATSAVDKLREMQKFFGLPETGKLSPRVMEIMQKPRCGVPD 315
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
S N KW + + Y I + T + + ++RA +W PL
Sbjct: 316 VAEFSLMPN---------SPKWHSRTVTYRIVSYTTDLPRFLVDQIVKRALRMWSMQIPL 468
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
F+ V + DI I FA G HGD+ PFDG G L HA+ PGPG+GGD HFD D
Sbjct: 469 NFKRVSW-------GTADIIIGFARGDHGDNFPFDGPGNTLGHAFAPGPGLGGDAHFDKD 627
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
E WT G + G + VA HELGH+LGL HS+ P+++M P YQ +++F L DD+ G
Sbjct: 628 EYWTDGEDS--GVNFLFVATHELGHSLGLGHSSVPSSVMYPTYQGDHSEDFSLTKDDIAG 801
Query: 286 IQKIYG 291
IQK+YG
Sbjct: 802 IQKLYG 819
>dbj|AB057752.1|AB057752 Paralichthys olivaceus MMP2 mRNA for gelatinase, complete cds
Length = 3245
Score = 170 bits (431), Expect = 3e-40
Identities = 111/320 (34%), Positives = 151/320 (46%), Gaps = 8/320 (2%)
Frame = +2
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
+D D W G G LFLVA HE GHALGLEHS DP A+MAP Y + T +F+L +D
Sbjct: 1322 YDDDRKW--GFCPDQGYSLFLVAAHEFGHALGLEHSQDPGALMAPIYTF--TKDFRLSHD 1489
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK 341
D+QGIQ++YG P
Sbjct: 1490 DVQGIQELYGASTDQPQTPTQG----------------------------------PVTP 1567
Query: 342 PNICDGN--FNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
+IC F+ + +R E F FKD++ +R N R PM + +W LP IDA YE
Sbjct: 1568 MDICKEPVVFDAIAQIRGETFFFKDRFLFRSVNYRSKPSGPMLVATYWPELPAKIDAAYE 1747
Query: 400 NS-EGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
N E VFF + WV+K L+ GYP + +L ID+A + KTY F G
Sbjct: 1748 NPLEEKTVFFSGKEMWVYKANDLERGYPKKISSLDLPTDLSQIDAAFNFRKNKKTYLFAG 1927
Query: 459 DRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE----KSTGNST 513
D++WRY EE + MD G+P+ I W GIP+ AF ++YF K K +S
Sbjct: 1928 DKFWRYDEETKIMDAGFPRLIADSWNGIPDGLDSAFSLNGIDYSYFFKGNHYFKLEDSSL 2107
Query: 514 KMLRVEPGYPRSILKDFMGC 533
K++++ I KD++GC
Sbjct: 2108 KIVKL-----GEITKDWLGC 2152
Score = 132 bits (331), Expect = 1e-28
Identities = 69/164 (42%), Positives = 94/164 (57%)
Frame = +2
Query: 69 MQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ + MQ+F+ + TG++D T++ MKKPRCGVPD + +N ++ WQ
Sbjct: 389 LKDTLKKMQKFFSLQETGEIDAKTVEIMKKPRCGVPDV----ANYNFFHRK-----PMWQ 541
Query: 129 HKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIF 188
I Y I + + + A RAF VW +VTPL+F L +G + DI I F
Sbjct: 542 KNDITYRILGYSLDLDEEVINDAFFRAFKVWSDVTPLSFTR-----LMDG--EADIMINF 700
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
HGD PFDG+ G LAHA+ PGPGIGGD+HFD DE WTLG+
Sbjct: 701 GRNEHGDGYPFDGKDGLLAHAFAPGPGIGGDSHFDDDEQWTLGD 832
>gb|AF144759.1|AF144759 Bos taurus MT2-MMP protein (MMP-15) mRNA, partial cds
Length = 380
Score = 170 bits (431), Expect = 3e-40
Identities = 70/125 (56%), Positives = 92/125 (73%)
Frame = +3
Query: 373 NRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITL 432
N V+D YPM I +FWRGLP I A YE +G FVFFK +++W+F++ L+PGYP L +
Sbjct: 3 NCVLDNYPMPIGHFWRGLPGDISAAYERQDGRFVFFKGDRYWLFREANLEPGYPQPLTSY 182
Query: 433 GSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGA 492
G GIP ID+AIWWE G T+FF+ DRYWR+ EE + DPGYPKPI++W+GIP SP+GA
Sbjct: 183 GLGIPYDRIDTAIWWEPTGHTFFFQEDRYWRFNEETQRGDPGYPKPISVWQGIPASPKGA 362
Query: 493 FVHKE 497
F+ +
Sbjct: 363 FLSND 377
Score = 46.6 bits (109), Expect = 0.007
Identities = 27/81 (33%), Positives = 44/81 (53%), Gaps = 4/81 (4%)
Frame = +3
Query: 362 FKDQWFWRVRNNRVMDGYPMQITYFWRGLP-PSID-AVYENSEGNFVFFKSNKFWVFKDT 419
FK +W R + GYP +T + G+P ID A++ G+ FF+ +++W F +
Sbjct: 108 FKGDRYWLFREANLEPGYPQPLTSYGLGIPYDRIDTAIWWEPTGHTFFFQEDRYWRFNEE 287
Query: 420 TLQ--PGYPHDLITLGSGIPS 438
T + PGYP I++ GIP+
Sbjct: 288 TQRGDPGYPKP-ISVWQGIPA 347
>ref|NM_010810.1| Mus musculus matrix metalloproteinase 7 (Mmp7), mRNA
Length = 1072
Score = 169 bits (429), Expect = 6e-40
Identities = 93/246 (37%), Positives = 127/246 (50%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL P S + ++ + MQ+F+G+ MTGK+ ++ M+KPRCGVPD
Sbjct: 143 WEQAQNYLRKFYPHDSKTKKVNSLVDNLKEMQKFFGLPMTGKLSPYIMEIMQKPRCGVPD 322
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
S N KW + + Y I + T + + +++A +W PL
Sbjct: 323 VAEYSLMPN---------SPKWHSRIVTYRIVSYTSDLPRIVVDQIVKKALRMWSMQIPL 475
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
F+ V + DI I FA HGDS PFDG G L HA+ PGPG+GGD HFD D
Sbjct: 476 NFKRVSW-------GTADIIIGFARRDHGDSFPFDGPGNTLGHAFAPGPGLGGDAHFDKD 634
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
E WT + G + A HE GH+LGL HS+ P +M P YQ +++F L DD+ G
Sbjct: 635 EYWT--DDEDAGVNFLFAATHEFGHSLGLSHSSVPGTVMYPTYQRDYSEDFSLTKDDIAG 808
Query: 286 IQKIYG 291
IQK+YG
Sbjct: 809 IQKLYG 826
>gb|L36244.1|MUSMAT Mus musculus metalloproteinase matrilysin mRNA, complete cds
Length = 1072
Score = 169 bits (429), Expect = 6e-40
Identities = 93/246 (37%), Positives = 127/246 (50%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL P S + ++ + MQ+F+G+ MTGK+ ++ M+KPRCGVPD
Sbjct: 143 WEQAQNYLRKFYPHDSKTKKVNSLVDNLKEMQKFFGLPMTGKLSPYIMEIMQKPRCGVPD 322
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
S N KW + + Y I + T + + +++A +W PL
Sbjct: 323 VAEYSLMPN---------SPKWHSRIVTYRIVSYTSDLPRIVVDQIVKKALRMWSMQIPL 475
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
F+ V + DI I FA HGDS PFDG G L HA+ PGPG+GGD HFD D
Sbjct: 476 NFKRVSW-------GTADIIIGFARRDHGDSFPFDGPGNTLGHAFAPGPGLGGDAHFDKD 634
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
E WT + G + A HE GH+LGL HS+ P +M P YQ +++F L DD+ G
Sbjct: 635 EYWT--DDEDAGVNFLFAATHEFGHSLGLSHSSVPGTVMYPTYQRDYSEDFSLTKDDIAG 808
Query: 286 IQKIYG 291
IQK+YG
Sbjct: 809 IQKLYG 826
>gb|U04444.1|FDU04444 Felis domesticus PUMP-1 mRNA, partial cds
Length = 1001
Score = 167 bits (424), Expect = 2e-39
Identities = 95/246 (38%), Positives = 129/246 (51%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL P + R A++ + + MQ+F+ + +TG +D I M++PRCG+PD
Sbjct: 80 WKQAQEYLKRFYPSDAKSRDADSFGAQLKEMQKFFRLPVTGMLDSRVIVVMQQPRCGLPD 259
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPL 165
N KW K + Y I + T + + +A ++W PL
Sbjct: 260 TGEDLPSRN---------RPKWISKVVTYRIISYTRDLPRVTVDHLVAKALNMWSKEIPL 412
Query: 166 TFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
+F V DI I FA G HGD PFDG GG LAHAY PGPG+GGD HFD D
Sbjct: 413 SFRRVVL-------GIPDIVIGFARGAHGDFYPFDGPGGTLAHAYEPGPGLGGDAHFDED 571
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
E W G G + VA HELGH+LGL HS+DP ++M P Y +++NFKL D++
Sbjct: 572 ERWADGRGL--GINFLAVATHELGHSLGLRHSSDPDSVMYPTYGARDSENFKLSPGDIRE 745
Query: 286 IQKIYG 291
IQ++YG
Sbjct: 746 IQELYG 763
>ref|NM_071389.1| Caenorhabditis elegans
Length = 1740
Score = 166 bits (419), Expect = 8e-39
Identities = 110/266 (41%), Positives = 139/266 (51%), Gaps = 20/266 (7%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSV------LRSAETM-QSAIAAMQQFYGINMTGKVDRNTIDWMKK 98
+LQ +GY+PP++ S ++SAE + +SAI Q+F GI TG +D T M
Sbjct: 178 YLQTFGYVPPSNSLQSRNGMAGDIQSAEQVFKSAIRKFQEFAGIAKTGFLDAATKAKMAL 357
Query: 99 PRCGVPDQ----TRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRR 154
RCGV D T GSS+F KW + YSI++ + + + R+AI
Sbjct: 358 SRCGVTDAPLALTSGSSQF------------KWSKTRLTYSIESWSSDLSKDDVRRAISE 501
Query: 155 AFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGP 214
A+ +W VTPL F EVP DI I F H D PFDGEGG LAHA P
Sbjct: 502 AYGLWSKVTPLEFSEVP------AGSTSDIKIRFGVRNHNDPWPFDGEGGVLAHATMPES 663
Query: 215 GIGGDTHFDSDEPWTLGNP----NHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQY 270
G+ HFD DE WT + N++ DL VA+HE GH LGLEHS D AIMAPFYQ
Sbjct: 664 GM---FHFDDDENWTYKDARKIHNNEATDLLAVAIHEGGHTLGLEHSRDENAIMAPFYQK 834
Query: 271 M--ETDNFKLPN---DDLQGIQKIYG 291
+ N+ PN DD+ IQ IYG
Sbjct: 835 TTDSSGNYVYPNLKSDDISAIQAIYG 912
>dbj|AB007815.1|AB007815 Caenorhabditis elegans mRNA for matrix metalloproteinase, complete
cds
Length = 1766
Score = 166 bits (419), Expect = 8e-39
Identities = 110/266 (41%), Positives = 139/266 (51%), Gaps = 20/266 (7%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSV------LRSAETM-QSAIAAMQQFYGINMTGKVDRNTIDWMKK 98
+LQ +GY+PP++ S ++SAE + +SAI Q+F GI TG +D T M
Sbjct: 184 YLQTFGYVPPSNSLQSRNGMAGDIQSAEQVFKSAIRKFQEFAGIAKTGFLDAATKAKMAL 363
Query: 99 PRCGVPDQ----TRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRR 154
RCGV D T GSS+F KW + YSI++ + + + R+AI
Sbjct: 364 SRCGVTDAPLALTSGSSQF------------KWSKTRLTYSIESWSSDLSKDDVRRAISE 507
Query: 155 AFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGP 214
A+ +W VTPL F EVP DI I F H D PFDGEGG LAHA P
Sbjct: 508 AYGLWSKVTPLEFSEVP------AGSTSDIKIRFGVRNHNDPWPFDGEGGVLAHATMPES 669
Query: 215 GIGGDTHFDSDEPWTLGNP----NHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQY 270
G+ HFD DE WT + N++ DL VA+HE GH LGLEHS D AIMAPFYQ
Sbjct: 670 GM---FHFDDDENWTYKDARKIHNNEATDLLAVAIHEGGHTLGLEHSRDENAIMAPFYQK 840
Query: 271 M--ETDNFKLPN---DDLQGIQKIYG 291
+ N+ PN DD+ IQ IYG
Sbjct: 841 TTDSSGNYVYPNLKSDDISAIQAIYG 918
>ref|XM_017384.1| Homo sapiens matrix metalloproteinase 7 (matrilysin, uterine)
(MMP7), mRNA
Length = 1120
Score = 135 bits (339), Expect(2) = 8e-38
Identities = 68/142 (47%), Positives = 87/142 (60%)
Frame = +1
Query: 150 KAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHA 209
+ + +A ++W PL F +V + DI I FA G HGDS PFDG G LAHA
Sbjct: 427 RLVSKALNMWGKEIPLHFRKVVW-------GTADIMIGFARGAHGDSYPFDGPGNTLAHA 585
Query: 210 YFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ 269
+ PG G+GGD HFD DE WT G+ G + A HELGH+LG+ HS+DP A+M P Y
Sbjct: 586 FAPGTGLGGDAHFDEDERWTDGSSL--GINFLYAATHELGHSLGMGHSSDPNAVMYPTYG 759
Query: 270 YMETDNFKLPNDDLQGIQKIYG 291
+ NFKL DD++GIQK+YG
Sbjct: 760 NGDPQNFKLSQDDIKGIQKLYG 825
Score = 48.9 bits (115), Expect(2) = 8e-38
Identities = 28/89 (31%), Positives = 44/89 (48%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL S ++A ++++ + MQ+F+G+ +TG ++ I+ M+KPRCGVPD
Sbjct: 141 WEQAQDYLKRFYLYDSETKNANSLEAKLKEMQKFFGLPITGMLNSRVIEIMQKPRCGVPD 320
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAY 134
S N KW K + Y
Sbjct: 321 VAEYSLFPN---------SPKWTSKVVTY 380
>gb|AF097638.1|AF097638 Canis familiaris matrix metalloproteinase-14 (MMP-14) mRNA, partial
cds
Length = 445
Score = 161 bits (408), Expect = 2e-37
Identities = 71/143 (49%), Positives = 102/143 (70%), Gaps = 1/143 (0%)
Frame = +3
Query: 398 YENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFK 457
YE +G FVFFK +K WVF + +L+PGYP + LG G+P+ ID+A++W GKTYFF+
Sbjct: 3 YERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFR 182
Query: 458 GDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIK-EKSTGNSTKML 516
G++Y+R+ EE+R++D YPK I +W+GIPESP+G+F+ + FTYF K K + + L
Sbjct: 183 GNKYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKL 362
Query: 517 RVEPGYPRSILKDFMGCDGPTDR 539
+VEPGYP+S L+D+MGC R
Sbjct: 363 KVEPGYPKSALRDWMGCPSSGSR 431
Score = 67.4 bits (163), Expect = 4e-09
Identities = 44/132 (33%), Positives = 66/132 (49%), Gaps = 5/132 (3%)
Frame = +3
Query: 362 FKDQWFWRVRNNRVMDGYPMQITYFWRGLP-PSID-AVYENSEGNFVFFKSNKFWVFKD- 418
FK W + GYP I RGLP ID A++ G FF+ NK++ F +
Sbjct: 33 FKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEE 212
Query: 419 -TTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPK 477
+ YP + I + GIP S + ++V TYF+KG++YW++ + ++PGYPK
Sbjct: 213 LRAVDSEYPKN-IKVWEGIPESPRGSFMGSDEV-FTYFYKGNKYWKFNNQKLKVEPGYPK 386
Query: 478 -PITIWKGIPES 488
+ W G P S
Sbjct: 387 SALRDWMGCPSS 422
>gb|AF267159.1|AF267159 Ovis aries gelatinase A mRNA, partial cds
Length = 744
Score = 157 bits (397), Expect = 3e-36
Identities = 93/250 (37%), Positives = 125/250 (49%), Gaps = 3/250 (1%)
Frame = +1
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
+++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 94 SNYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLS 261
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
+DD+QGIQ++YG ++ P
Sbjct: 262 HDDIQGIQELYGASPDIDTGTGPTP------TLGPVT----------------------- 354
Query: 340 AKPNIC--DGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 397
P +C D F+ + +R E+F FKD++ WR R P+ + FW LP IDAV
Sbjct: 355 --PELCKQDIVFDGISQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEKIDAV 528
Query: 398 YEN-SEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
YE+ E VFF N++WV+ +TL+ GYP L +LG +D+A W KTY F
Sbjct: 529 YEDPQEEKAVFFAGNEYWVYSASTLERGYPKPLTSLGLPPDVQKVDAAFNWSKNKKTYIF 708
Query: 457 KGDRYWRYGE 466
GD++WRY E
Sbjct: 709 AGDKFWRYNE 738
Score = 39.7 bits (91), Expect = 0.88
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Frame = +1
Query: 403 GNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYW 462
G FFK W +P P + T +P ID+ K FF G+ YW
Sbjct: 406 GEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEK-IDAVYEDPQEEKAVFFAGNEYW 582
Query: 463 RYGEEMRSMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTY 502
Y +++ GYPKP+T G+P Q AF +N TY
Sbjct: 583 VYSAS--TLERGYPKPLTS-LGLPPDVQKVDAAFNWSKNKKTY 702
>gb|AF134714.1|AF134714 Bos taurus MMP-1 protein mRNA, partial cds
Length = 524
Score = 153 bits (387), Expect = 4e-35
Identities = 79/165 (47%), Positives = 102/165 (60%)
Frame = +3
Query: 127 WQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITI 186
W++ ++ Y I+N TP + A+ +AI +AF +W NVTPLTF +V + DI I
Sbjct: 39 WENTNLTYRIENYTPDLSRADVDQAIEKAFQLWSNVTPLTFTKV-------SEGQADIMI 197
Query: 187 IFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVH 246
F G H D+SPFDG GG LAHA+ PG GIGGD HFD DE WT N +L+ VA H
Sbjct: 198 SFVRGDHRDNSPFDGPGGNLAHAFQPGAGIGGDAHFDDDEWWT---SNFQDYNLYRVAAH 368
Query: 247 ELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
E GH+LGL HS D A+M P Y + + + +L DD+ GIQ IYG
Sbjct: 369 EFGHSLGLAHSTDIGALMYPSYTF--SGDVQLSQDDIDGIQAIYG 497
>gb|AF156935.1|AF156935 Synthetic construct stromelysin catalytic domain (S1CD) gene,
partial cds
Length = 525
Score = 152 bits (383), Expect = 1e-34
Identities = 78/167 (46%), Positives = 98/167 (57%), Gaps = 1/167 (0%)
Frame = +1
Query: 126 KWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDIT 185
KW+ H+ Y I N TP + A+ +A VW+ VTPLTF + + + DI
Sbjct: 25 KWRKTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLY-------EGEADIM 183
Query: 186 IIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAV 245
I FA HGD PFDG G LAHAY PGPGI GD HFD DE WT + G +LFLVA
Sbjct: 184 ISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT---KDTTGTNLFLVAA 354
Query: 246 HELGHALGLEHSNDPTAIMAPFYQYM-ETDNFKLPNDDLQGIQKIYG 291
HE+GH+LGL HS + A+M P Y + + F+L DD+ GIQ +YG
Sbjct: 355 HEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYG 495
>gb|AF149850.1|AF149850 Canis familiaris matrix metalloproteinase-13 mRNA, partial cds
Length = 590
Score = 150 bits (378), Expect = 5e-34
Identities = 93/243 (38%), Positives = 118/243 (48%), Gaps = 2/243 (0%)
Frame = +3
Query: 151 AIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAY 210
A ++AF VW +VTPL F L +G DI I F + HGD PFDG G LAHA+
Sbjct: 3 AFKKAFKVWSDVTPLNFTR-----LHDGT--ADIMISFGTKEHGDFYPFDGPSGLLAHAF 161
Query: 211 FPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQY 270
PGP GGD HFD DE WT + G +LFLVA HE GH+LGL+HS DP A+M P Y Y
Sbjct: 162 PPGPNYGGDAHFDDDETWTSSSK---GYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTY 332
Query: 271 METDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXX 330
+F LP+DD+QGIQ +YG
Sbjct: 333 TGKSHFMLPDDDVQGIQSLYG------------------------------------PGD 404
Query: 331 XXXXXSYPGAKPNICDG--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWR 388
+P P+ CD + + + LR E +FKD++FWR+ +V D FW
Sbjct: 405 EDPNPRHP-KTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQV-DAELFLTKSFWP 578
Query: 389 GLP 391
LP
Sbjct: 579 ELP 587
>emb|AL133448.4|CNS01DV2 Human chromosome 14 DNA sequence *** IN PROGRESS *** BAC R-413B13 of
library RPCI-11 from chromosome 14 of Homo sapiens (Human),
complete sequence
Length = 173803
Score = 147 bits (372), Expect = 2e-33
Identities = 68/104 (65%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Frame = +2
Query: 135 SIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENG-KRDVDITIIFASGFH 193
SI+N TPKVG+ T +AIR+AF VW++ TPL F EVPY + G ++ DI I FA GFH
Sbjct: 137627 SIQNYTPKVGEYATYEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFH 137806
Query: 194 GDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDG 237
GDS+PFDGEGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +G
Sbjct: 137807 GDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNG 137938
Score = 123 bits (308), Expect = 6e-26
Identities = 69/182 (37%), Positives = 94/182 (50%), Gaps = 46/182 (25%)
Frame = +3
Query: 362 FKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSN---------- 411
F+++WFWRVRNN+VMDGYPM I FWRGLP SI+ YE +G FVFFK N
Sbjct: 139584 FQERWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYERKDGKFVFFKGNQALHFSLWE* 139763
Query: 412 ------------------------------KFWVFKDTTLQPGYPHDLITLGSGIPSHGI 441
K WVF + +L+PGYP + LG G+P+ I
Sbjct: 139764 GGSP*RS*FPLKSLEPKLNPDVALLSSPGDKHWVFDEASLEPGYPKHIKELGRGLPTDKI 139943
Query: 442 DSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYP-KP-----ITIWKGIPESPQGAFVH 495
D+A++W GKTYFF+G++ ++ + PG P KP ++ + P PQ A +
Sbjct: 139944 DAALFWMPNGKTYFFRGNK-----*DLNPLTPGLPQKPPPPQIPSVLEKDPLYPQHASLE 140108
Query: 496 KE 497
KE
Sbjct: 140109 KE 140114
Score = 99.4 bits (246), Expect = 9e-19
Identities = 50/88 (56%), Positives = 62/88 (69%), Gaps = 9/88 (10%)
Frame = +1
Query: 213 GPGIGGDTHFDSDEPWTLGN---------PNHDGNDLFLVAVHELGHALGLEHSNDPTAI 263
G +GG+T E L P GND+FLVAVHELGHALGLEHS+DP+AI
Sbjct: 138376 GSRLGGETKAAGGEAGRLREGTQAAIVTVPILPGNDIFLVAVHELGHALGLEHSSDPSAI 138555
Query: 264 MAPFYQYMETDNFKLPNDDLQGIQKIYG 291
MAPFYQ+M+T+NF LP+DD +GIQ++YG
Sbjct: 138556 MAPFYQWMDTENFVLPDDDRRGIQQLYG 138639
Score = 83.6 bits (205), Expect = 5e-14
Identities = 47/111 (42%), Positives = 69/111 (61%), Gaps = 2/111 (1%)
Frame = +1
Query: 500 FTYFIK-EKSTGNSTKMLRVEPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDIIIKLDN 558
FTYF K K + + L+VEPGYP+S L+D+MGC P+ D + ++ III++D
Sbjct: 140929 FTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGC--PSGGRPDEGTEEETEVIIIEVDE 141102
Query: 559 TAS-TVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
V A A+V+P +L L +L + VF F+R GTPR +LYC+RS+ + V
Sbjct: 141103 EGGGAVSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPRRLLYCQRSLLDKV 141255
Score = 64.7 bits (156), Expect = 3e-08
Identities = 27/52 (51%), Positives = 40/52 (76%)
Frame = +3
Query: 42 NVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTI 93
+++ WLQ+YGYLPP D R RS +++ +AIAAMQ+FYG+ +TGK D +T+
Sbjct: 136701 SLQAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTM 136856
Score = 56.2 bits (134), Expect = 9e-06
Identities = 22/44 (50%), Positives = 33/44 (75%)
Frame = +2
Query: 456 FKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENG 499
F RY+R+ EE+R++D YPK I +W+GIPESP+G+F+ + G
Sbjct: 140456 FPFPRYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEG 140587
Score = 55.5 bits (132), Expect = 2e-05
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +3
Query: 96 MKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAY 134
M++PRCGVPD+ K N+RRKRYA+ G KWQH I +
Sbjct: 137136 MRRPRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITF 137252
Score = 42.0 bits (97), Expect = 0.18
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +1
Query: 338 PGAKPNICDGNFNTLVILRREMFVFK 363
P PNICDGNF+T+ +LR EMFVFK
Sbjct: 139012 PTYGPNICDGNFDTVAMLRGEMFVFK 139089
>emb|AL135998.6|CNS01DVO Human chromosome 14 DNA sequence BAC R-137H15 of library RPCI-11 from
chromosome 14 of Homo sapiens (Human), complete sequence
Length = 165871
Score = 147 bits (372), Expect = 2e-33
Identities = 68/104 (65%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Frame = -1
Query: 135 SIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENG-KRDVDITIIFASGFH 193
SI+N TPKVG+ T +AIR+AF VW++ TPL F EVPY + G ++ DI I FA GFH
Sbjct: 62776 SIQNYTPKVGEYATYEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFH 62597
Query: 194 GDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDG 237
GDS+PFDGEGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +G
Sbjct: 62596 GDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNG 62465
Score = 123 bits (308), Expect = 6e-26
Identities = 69/182 (37%), Positives = 94/182 (50%), Gaps = 46/182 (25%)
Frame = -2
Query: 362 FKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSN---------- 411
F+++WFWRVRNN+VMDGYPM I FWRGLP SI+ YE +G FVFFK N
Sbjct: 60819 FQERWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYERKDGKFVFFKGNQALHFSLWE* 60640
Query: 412 ------------------------------KFWVFKDTTLQPGYPHDLITLGSGIPSHGI 441
K WVF + +L+PGYP + LG G+P+ I
Sbjct: 60639 GGSP*RS*FPLKSLEPKLNPDVALLSSPGDKHWVFDEASLEPGYPKHIKELGRGLPTDKI 60460
Query: 442 DSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYP-KP-----ITIWKGIPESPQGAFVH 495
D+A++W GKTYFF+G++ ++ + PG P KP ++ + P PQ A +
Sbjct: 60459 DAALFWMPNGKTYFFRGNK-----*DLNPLTPGLPQKPPPPQIPSVLEKDPLYPQHASLE 60295
Query: 496 KE 497
KE
Sbjct: 60294 KE 60289
Score = 99.4 bits (246), Expect = 9e-19
Identities = 50/88 (56%), Positives = 62/88 (69%), Gaps = 9/88 (10%)
Frame = -3
Query: 213 GPGIGGDTHFDSDEPWTLGN---------PNHDGNDLFLVAVHELGHALGLEHSNDPTAI 263
G +GG+T E L P GND+FLVAVHELGHALGLEHS+DP+AI
Sbjct: 62027 GSRLGGETKAAGGEAGRLREGTQAAIVTVPILPGNDIFLVAVHELGHALGLEHSSDPSAI 61848
Query: 264 MAPFYQYMETDNFKLPNDDLQGIQKIYG 291
MAPFYQ+M+T+NF LP+DD +GIQ++YG
Sbjct: 61847 MAPFYQWMDTENFVLPDDDRRGIQQLYG 61764
Score = 83.6 bits (205), Expect = 5e-14
Identities = 47/111 (42%), Positives = 69/111 (61%), Gaps = 2/111 (1%)
Frame = -3
Query: 500 FTYFIK-EKSTGNSTKMLRVEPGYPRSILKDFMGCDGPTDRDKDRHSPQDDVDIIIKLDN 558
FTYF K K + + L+VEPGYP+S L+D+MGC P+ D + ++ III++D
Sbjct: 59474 FTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGC--PSGGRPDEGTEEETEVIIIEVDE 59301
Query: 559 TAS-TVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILYCKRSMQEWV 608
V A A+V+P +L L +L + VF F+R GTPR +LYC+RS+ + V
Sbjct: 59300 EGGGAVSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPRRLLYCQRSLLDKV 59148
Score = 64.7 bits (156), Expect = 3e-08
Identities = 27/52 (51%), Positives = 40/52 (76%)
Frame = -2
Query: 42 NVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTI 93
+++ WLQ+YGYLPP D R RS +++ +AIAAMQ+FYG+ +TGK D +T+
Sbjct: 63702 SLQAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTM 63547
Score = 56.2 bits (134), Expect = 9e-06
Identities = 22/44 (50%), Positives = 33/44 (75%)
Frame = -1
Query: 456 FKGDRYWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENG 499
F RY+R+ EE+R++D YPK I +W+GIPESP+G+F+ + G
Sbjct: 59947 FPFPRYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEG 59816
Score = 55.5 bits (132), Expect = 2e-05
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = -2
Query: 96 MKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAY 134
M++PRCGVPD+ K N+RRKRYA+ G KWQH I +
Sbjct: 63267 MRRPRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITF 63151
Score = 42.0 bits (97), Expect = 0.18
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = -3
Query: 338 PGAKPNICDGNFNTLVILRREMFVFK 363
P PNICDGNF+T+ +LR EMFVFK
Sbjct: 61391 PTYGPNICDGNFDTVAMLRGEMFVFK 61314
>gb|AF248646.1|AF248646 Homo sapiens matrix metalloproteinase-26 precursor (MMP26) mRNA,
complete cds
Length = 999
Score = 142 bits (358), Expect = 1e-31
Identities = 85/224 (37%), Positives = 118/224 (51%)
Frame = +1
Query: 68 TMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKW 127
T ++ +QQF+ N T +D + +P CGVPD S +I R KW
Sbjct: 157 TQETQTQLLQQFHR-NGTDLLDMQMHALLHQPHCGVPD----GSDTSISPGRC-----KW 306
Query: 128 QHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITII 187
+ Y I N + + + +I A +W NVTPL F++V +NG D DI +
Sbjct: 307 NKHTLTYRIINYPHDMKPSAVKDSIYNAVSIWSNVTPLIFQQV-----QNG--DADIKVS 465
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHE 247
F H D PFDG GG L HA+ P G G HFD +E W+ + G +LFLVA HE
Sbjct: 466 FWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWSASDT---GYNLFLVATHE 636
Query: 248 LGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
+GH+LGL+HS + ++IM P Y Y + F+L DD+Q IQ +YG
Sbjct: 637 IGHSLGLQHSGNQSSIMYPTYWYHDPRTFQLSADDIQRIQHLYG 768
>ref|XM_051704.1| Homo sapiens matrix metalloproteinase 26 (MMP26), mRNA
Length = 989
Score = 142 bits (358), Expect = 1e-31
Identities = 85/224 (37%), Positives = 118/224 (51%)
Frame = +1
Query: 68 TMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKW 127
T ++ +QQF+ N T +D + +P CGVPD S +I R KW
Sbjct: 166 TQETQTQLLQQFHR-NGTDLLDMQMHALLHQPHCGVPD----GSDTSISPGRC-----KW 315
Query: 128 QHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITII 187
+ Y I N + + + +I A +W NVTPL F++V +NG D DI +
Sbjct: 316 NKHTLTYRIINYPHDMKPSAVKDSIYNAVSIWSNVTPLIFQQV-----QNG--DADIKVS 474
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHE 247
F H D PFDG GG L HA+ P G G HFD +E W+ + G +LFLVA HE
Sbjct: 475 FWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWSASDT---GYNLFLVATHE 645
Query: 248 LGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
+GH+LGL+HS + ++IM P Y Y + F+L DD+Q IQ +YG
Sbjct: 646 IGHSLGLQHSGNQSSIMYPTYWYHDPRTFQLSADDIQRIQHLYG 777
>ref|NM_021801.2| Homo sapiens matrix metalloproteinase 26 (MMP26), mRNA
Length = 1009
Score = 142 bits (358), Expect = 1e-31
Identities = 85/224 (37%), Positives = 118/224 (51%)
Frame = +1
Query: 68 TMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKW 127
T ++ +QQF+ N T +D + +P CGVPD S +I R KW
Sbjct: 166 TQETQTQLLQQFHR-NGTDLLDMQMHALLHQPHCGVPD----GSDTSISPGRC-----KW 315
Query: 128 QHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITII 187
+ Y I N + + + +I A +W NVTPL F++V +NG D DI +
Sbjct: 316 NKHTLTYRIINYPHDMKPSAVKDSIYNAVSIWSNVTPLIFQQV-----QNG--DADIKVS 474
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHE 247
F H D PFDG GG L HA+ P G G HFD +E W+ + G +LFLVA HE
Sbjct: 475 FWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWSASDT---GYNLFLVATHE 645
Query: 248 LGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
+GH+LGL+HS + ++IM P Y Y + F+L DD+Q IQ +YG
Sbjct: 646 IGHSLGLQHSGNQSSIMYPTYWYHDPRTFQLSADDIQRIQHLYG 777
>gb|AF022427.1|MM14MMP4 Mus musculus matrix metalloproteinase-14 (Mmp14), exon 4
Length = 555
Score = 142 bits (358), Expect = 1e-31
Identities = 65/104 (62%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Frame = +2
Query: 135 SIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENG-KRDVDITIIFASGFH 193
SI+N T K G+ T + IR+AF VW++ TPL F EVPY + G ++ DI I+FA GFH
Sbjct: 29 SIQNYTSKXGEXXTFEXIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFH 208
Query: 194 GDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDG 237
GDS+PFDGEGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +G
Sbjct: 209 GDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNEDLNG 340
>gb|AF291664.1|AF291664 Homo sapiens matrix metalloproteinase-26 (MMP26) mRNA, complete cds
Length = 998
Score = 142 bits (358), Expect = 1e-31
Identities = 85/224 (37%), Positives = 118/224 (51%)
Frame = +1
Query: 68 TMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKW 127
T ++ +QQF+ N T +D + +P CGVPD S +I R KW
Sbjct: 166 TQETQTQLLQQFHR-NGTDLLDMQMHALLHQPHCGVPD----GSDTSISPGRC-----KW 315
Query: 128 QHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITII 187
+ Y I N + + + +I A +W NVTPL F++V +NG D DI +
Sbjct: 316 NKHTLTYRIINYPHDMKPSAVKDSIYNAVSIWSNVTPLIFQQV-----QNG--DADIKVS 474
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHE 247
F H D PFDG GG L HA+ P G G HFD +E W+ + G +LFLVA HE
Sbjct: 475 FWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWSASDT---GYNLFLVATHE 645
Query: 248 LGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
+GH+LGL+HS + ++IM P Y Y + F+L DD+Q IQ +YG
Sbjct: 646 IGHSLGLQHSGNQSSIMYPTYWYHDPRTFQLSADDIQRIQHLYG 777
>emb|AJ251531.1|HSA251531 Homo sapiens mRNA for matrilysin-2 (MMP26 gene)
Length = 995
Score = 142 bits (358), Expect = 1e-31
Identities = 85/224 (37%), Positives = 118/224 (51%)
Frame = +1
Query: 68 TMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKW 127
T ++ +QQF+ N T +D + +P CGVPD S +I R KW
Sbjct: 163 TQETQTQLLQQFHR-NGTDLLDMQMHALLHQPHCGVPD----GSDTSISPGRC-----KW 312
Query: 128 QHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITII 187
+ Y I N + + + +I A +W NVTPL F++V +NG D DI +
Sbjct: 313 NKHTLTYRIINYPHDMKPSAVKDSIYNAVSIWSNVTPLIFQQV-----QNG--DADIKVS 471
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHE 247
F H D PFDG GG L HA+ P G G HFD +E W+ + G +LFLVA HE
Sbjct: 472 FWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWSASDT---GYNLFLVATHE 642
Query: 248 LGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
+GH+LGL+HS + ++IM P Y Y + F+L DD+Q IQ +YG
Sbjct: 643 IGHSLGLQHSGNQSSIMYPTYWYHDPRTFQLSADDIQRIQHLYG 774
>gb|AF230354.1|AF230354 Homo sapiens matrix metalloproteinase MMP-26 mRNA, complete cds
Length = 994
Score = 141 bits (356), Expect = 2e-31
Identities = 85/224 (37%), Positives = 118/224 (51%)
Frame = +3
Query: 68 TMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKW 127
T ++ +QQF+ N T +D + +P CGVPD S +I R KW
Sbjct: 153 TQETQTQLLQQFHR-NGTDLLDIQMHALLHQPHCGVPD----GSDTSISPGRC-----KW 302
Query: 128 QHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITII 187
+ Y I N + + + +I A +W NVTPL F++V +NG D DI +
Sbjct: 303 NKHTLTYRIINYPHDMKPSAVKDSIYNAVSIWSNVTPLIFQQV-----QNG--DADIKVS 461
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHE 247
F H D PFDG GG L HA+ P G G HFD +E W+ + G +LFLVA HE
Sbjct: 462 FWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWSASDT---GYNLFLVATHE 632
Query: 248 LGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
+GH+LGL+HS + ++IM P Y Y + F+L DD+Q IQ +YG
Sbjct: 633 IGHSLGLQHSGNQSSIMYPTYWYHDPRTFQLSADDIQRIQHLYG 764
>gb|U63725.1|GMU63725 Glycine max metalloproteinase mRNA, complete cds
Length = 1196
Score = 139 bits (349), Expect = 1e-30
Identities = 99/261 (37%), Positives = 130/261 (48%), Gaps = 11/261 (4%)
Frame = +3
Query: 42 NVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
NV+ + GY+P P +T+ SAI Q+ Y +N+TGK D NT+ + PRC
Sbjct: 210 NVKNYFHHLGYIPNA-PHFDD-NFDDTLVSAIKTYQKNYNLNVTGKFDINTLKQIMTPRC 383
Query: 102 GVPD---QTRGSSKFN-IRRKRYALTGQKWQ--HKHIAYSIKNVTPKVGDAETRKAIRRA 155
GVPD T ++ F I + +WQ + Y+ + P++ D + AI RA
Sbjct: 384 GVPDIIINTNKTTSFGMISDYTFFKDMPRWQAGTTQLTYAF-SPEPRLDDT-FKSAIARA 557
Query: 156 FDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG 215
F W V + F+E E N I I+FAS HGD PFDG GG L HA+ P
Sbjct: 558 FSKWTPVVNIAFQETTSYETAN------IKILFASKNHGDPYPFDGPGGILGHAFAP--- 710
Query: 216 IGGDTHFDSDEPWTLG-----NPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQY 270
G HFD+DE W +P DL VAVHE+GH LGL HS+D AIM P
Sbjct: 711 TDGRCHFDADEYWVASGDVTKSPVTSAFDLESVAVHEIGHLLGLGHSSDLRAIMYPSIP- 887
Query: 271 METDNFKLPNDDLQGIQKIYG 291
T L DD+ GI+K+YG
Sbjct: 888 PRTRKVNLAQDDIDGIRKLYG 950
>emb|X76537.1|MMSROM2 Mus musculus mRNA for stromelysin-2
Length = 683
Score = 138 bits (348), Expect = 1e-30
Identities = 86/257 (33%), Positives = 128/257 (49%), Gaps = 4/257 (1%)
Frame = +3
Query: 228 WTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD-NFKLPNDDLQGI 286
WTL G +LFLVA HELGH+LGL HS+ ++M P Y++ + NF L DD++GI
Sbjct: 3 WTLAP---SGTNLFLVAAHELGHSLGLFHSDKKESLMYPVYRFSTSPANFHLSQDDIEGI 173
Query: 287 QKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICD 346
Q +YG S+ P CD
Sbjct: 174 QSLYGAGPSSDATVVPVL------SVSPRPETTDK-----------------------CD 266
Query: 347 G--NFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE-NSEG 403
+F+++ LR E+ FKD++FWR + + + I+ FW LP +DA YE ++
Sbjct: 267 PALSFDSVNTLRGEVLFFKDRYFWRRSHWNPEPEFHL-ISAFWPTLPSDLDAAYEAHNTD 443
Query: 404 NFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWR 463
+ + FK ++FW + +Q GYP + TLG ID+A++ ++ KTYFF GD+YWR
Sbjct: 444 SVLIFKGSQFWAVRGNEVQAGYPKGIHTLGFPPTVKKIDAAVFEKEKKKTYFFVGDKYWR 623
Query: 464 YGEEMRSMDPGYPKPIT 480
+ E MD G+P+ IT
Sbjct: 624 FDETRHVMDKGFPRQIT 674
>dbj|AB031324.1|AB031324 Sus scrofa mRNA for matrilysin-related protein, complete cds
Length = 1198
Score = 138 bits (347), Expect = 2e-30
Identities = 71/159 (44%), Positives = 94/159 (58%)
Frame = +2
Query: 133 AYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGF 192
A I + T + + + +A +W N PL+F++V + DI I FA G
Sbjct: 422 ATRIVSYTRDLPHVTVNQLVTKALKMWSNEIPLSFKKVSW-------GIADIIIGFARGA 580
Query: 193 HGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHAL 252
HGD+ PFDG G LAHA+ PGPG+GGD HFD DE W+ G G + A HELGH+L
Sbjct: 581 HGDAYPFDGPGNTLAHAFAPGPGLGGDAHFDEDEHWSDG--GSIGINFLYAATHELGHSL 754
Query: 253 GLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
GL HS+DP A+M P Y + + +FKL DD+ GIQK+YG
Sbjct: 755 GLAHSSDPNAVMYPTYGEVYSKDFKLSQDDINGIQKLYG 871
Score = 51.6 bits (122), Expect = 2e-04
Identities = 23/60 (38%), Positives = 37/60 (61%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q GYL P S + A ++++ + MQ+F+ + +TG ++ + I M+KPRCGVPD
Sbjct: 102 WEQAQGYLKKFYPSNSKTKDANSLEAKLKQMQKFFRLPITGMLNSHIIKIMQKPRCGVPD 281
>dbj|AB057753.1|AB057753 Paralichthys olivaceus MMP9 mRNA for gelatinase, complete cds
Length = 2802
Score = 137 bits (344), Expect = 4e-30
Identities = 75/189 (39%), Positives = 100/189 (52%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+++GYL S +S + A+ MQ+ G+ TGK+D++T++ MK+PRCGV
Sbjct: 311 ETYLKRFGYLDKM--HRSGFQSMVSTAKALKMMQRQMGLKETGKLDKSTLEAMKQPRCGV 484
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVT 163
PD + + KW H + Y N +P + + A RAF VW +VT
Sbjct: 485 PD---------VANYQTFEGDLKWDHNDVTYRTLNYSPDMESSLIDDAFARAFKVWSDVT 637
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PLTF + + DI I F HGD PFDG G LAHAY PG G+ GD HFD
Sbjct: 638 PLTFTRLY-------EGTADIMISFGKADHGDPYPFDGRNGLLAHAYPPGEGVQGDAHFD 796
Query: 224 SDEPWTLGN 232
DE WTLGN
Sbjct: 797 DDEHWTLGN 823
Score = 114 bits (284), Expect = 4e-23
Identities = 82/291 (28%), Positives = 130/291 (44%), Gaps = 5/291 (1%)
Frame = +2
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
++D D W G + +G LFLVA HE GHALGL+HSN A+M P Y Y+E +F L
Sbjct: 1310 NYDEDAKW--GFCDDEGYSLFLVAAHEFGHALGLDHSNIREALMYPMYTYVE--DFSLHK 1477
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGA 340
DD++GIQ +YG PP
Sbjct: 1478 DDIEGIQYLYGRGTGPD-------------PTPPQPTSTTTTPNPTEEPEPTTPQPVDPT 1618
Query: 341 KPNICDGNFNTLVILRREMFVFKDQWFWRV--RNNRVMDGYPMQITYFWRGLPPSIDAVY 398
+ F+T+ ++ E+ F++ +W++ R + + G P ++ W LP ID+ +
Sbjct: 1619 RDACKLTKFDTITMIENELHFFENGNYWKMPSRGDGGLKG-PFSLSERWPALPAVIDSAF 1795
Query: 399 EN-SEGNFVFFKSNKFWVF-KDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFF 456
E+ N FF N+FWV+ K+ L P + LG ++ A+ GK F
Sbjct: 1796 EDLLTKNMYFFSGNRFWVYTKEGVLG---PRSIEKLGLPTSIQKVEGAL-QRGKGKVLLF 1963
Query: 457 KGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKE 506
+ +W++ + + MD GYPK ++ G+P F +K G YF ++
Sbjct: 1964 TEESFWKFDLKSQKMDKGYPKSTDYVFGGVPNDAHDVFQYK--GHMYFCRD 2110
>dbj|AB007817.1|AB007817 Caenorhabditis elegans mRNA for matrix metalloproteinase, complete
cds
Length = 1736
Score = 137 bits (344), Expect = 4e-30
Identities = 127/502 (25%), Positives = 204/502 (40%), Gaps = 14/502 (2%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+LQKYGYL D ++S +E++ A+ MQ+ G+ TG++D TI M++PRCG PD
Sbjct: 127 FLQKYGYLTSGDNQLS----SESLSDALKNMQRMAGLEETGELDERTIQMMERPRCGHPD 294
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNV--TPKVGDAETRKAIRRAFDVWQNVT 163
R KRYA KW+ K I Y K V + ++ + R+ + +A W +
Sbjct: 295 VEDHQKS---RGKRYAPPQFKWKEKIITYGCKAVGTSTRISLDDLRRTMHQAASQWSELA 465
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
+ E + K + + + + FD + LAHA+FP G H +
Sbjct: 466 DVEIVE------SSVKNPMMVISAGRENHYPCTVRFDTKT--LAHAFFP---TNGQIHIN 612
Query: 224 SDEPWTLGNPNH--DGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
+ + N N L+ V HE+GHALG HS D ++M + Y +K +
Sbjct: 613 DRVQFAMTNYTERMGANSLYSVVAHEMGHALGFSHSPDIDSVM---FAYDTPRKWKFTSM 783
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK 341
D ++ YG + +
Sbjct: 784 DKYNMRSYYG----------AKASKKENEEEERKTENEDKRRKTEKDRGRTREHESDDIR 933
Query: 342 PNICDGNFNTLVILRREMFVFKDQWFWRVRNN---RVMDGYPMQITYFWRGLPPSIDAVY 398
PN C +V R E +FK QW WRV ++ ++ P I + GLP IDA
Sbjct: 934 PNECRVENPIVVQYRGEYLIFKSQWVWRVSSDWKRLIIKAVP--INQLFPGLPNPIDAAV 1107
Query: 399 ENSEGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGS-GIPSHGIDSAIWWE--DVGKTYF 455
+VF + ++ + + H + L GI +D A W + Y
Sbjct: 1108TVGHNLWVFVGEMIYVIYGNHMV-----HAPLRLSDIGINEKYVDLAYEWHYFNPPAVYI 1272
Query: 456 FKGDRYWRYGEEM--RSMDPGYPKPITI-WKGIPESPQGAFVHKENGFTYFIKEKSTGNS 512
+KG RYW+ E+M R +D YPK + W +P+ AF +++ + NS
Sbjct: 1273WKGSRYWKLDEKMYHRRVDERYPKDTDLNWARVPKGVHSAFTYEKEIHLLRGNQVFRMNS 1452
Query: 513 TK-MLRVEPGYPRSILKDFMGC 533
++ + + GYP+ + F C
Sbjct: 1453SRSVFDIADGYPQPLQSFFGFC 1518
>gb|AF072455.1|AF072455 Xenopus laevis gelatinase B (MMP-9) mRNA, complete cds
Length = 3451
Score = 136 bits (342), Expect = 7e-30
Identities = 79/189 (41%), Positives = 102/189 (53%), Gaps = 1/189 (0%)
Frame = +1
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L ++GYL + S T+Q+A+ MQQ G+ TG +D T++ MK+PRCGV
Sbjct: 208 ESYLLQFGYL------IQEQGSNATLQNALTIMQQKLGLKETGVLDAETLEAMKRPRCGV 369
Query: 104 PDQTRGSSKFNIRRKRYALTGQ-KWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNV 162
PD +FN G KW H I Y I N +P + A RAF VW +V
Sbjct: 370 PD----IGQFN------TFEGDLKWDHNDITYRILNYSPDLDPEVIDDAFARAFKVWSDV 519
Query: 163 TPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPL+F + + DI I+F + HGD PFD + G LAHAY PGPG+ GD HF
Sbjct: 520 TPLSFTRIY-------SGEPDINILFGTEDHGDPYPFDRKDGLLAHAYPPGPGVQGDAHF 678
Query: 223 DSDEPWTLG 231
D DE WTLG
Sbjct: 679 DDDEFWTLG 705
Score = 103 bits (256), Expect = 6e-20
Identities = 80/294 (27%), Positives = 131/294 (44%), Gaps = 6/294 (2%)
Frame = +1
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
+++D D W G G LFLVA HE GHALGL+HS+ A+M P Y Y++ +F+L
Sbjct: 1192 SNYDLDSKW--GFCPDQGYSLFLVAAHEFGHALGLDHSDVQDALMYPMYSYVK--DFQLH 1359
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
DD++GIQ +YG + P P
Sbjct: 1360 QDDVRGIQFLYGTGSG---------------APPNPNPPKPTKKPLATKRPRTTTRPVPP 1494
Query: 340 AKP--NICDGN-FNTLVILRREMFVFKDQWFWRVR-NNRVMDGYPMQITYFWRGLPPSID 395
P + C+ F+ + L+ + FKD +W + ++ P++I+ W LP ID
Sbjct: 1495 VNPAQDACNVEMFDAIADLQGALHFFKDGLYWTLTPRSKNSPQSPLRISDTWPALPSKID 1674
Query: 396 AVYENSEGNFVFFKS-NKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTY 454
+++ +FF S +KFW + T+ P + LG I + + D GK
Sbjct: 1675 TAFQDPTSKSIFFFSGSKFWQYTGTSAIG--PRSIEKLGLSKDVEAIMGS-FARDNGKAL 1845
Query: 455 FFKGDRYWRYGEEMRSMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFIKEK 507
F G++YWR + ++D GYP+ + G+P F+++ N YF +++
Sbjct: 1846 LFNGEQYWRLNLKTLTIDNGYPRQTADNYPGVPGDSHDVFLYQGN--YYFCQDQ 2001
Score = 40.0 bits (92), Expect = 0.67
Identities = 32/135 (23%), Positives = 56/135 (40%), Gaps = 1/135 (0%)
Frame = +1
Query: 402 EGNFVFFKSNKFWVFKDTTLQ-PGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDR 460
+G FFK +W + P P + +PS ID+A +FF G +
Sbjct: 1552 QGALHFFKDGLYWTLTPRSKNSPQSPLRISDTWPALPSK-IDTAFQDPTSKSIFFFSGSK 1728
Query: 461 YWRYGEEMRSMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKMLRVEP 520
+W+Y ++ P + + + K + E+ G+F F E+ + K L ++
Sbjct: 1729 FWQY-TGTSAIGPRSIEKLGLSKDV-EAIMGSFARDNGKALLFNGEQYWRLNLKTLTIDN 1902
Query: 521 GYPRSILKDFMGCDG 535
GYPR ++ G G
Sbjct: 1903 GYPRQTADNYPGVPG 1947
>gb|AF222690.1|AF222690 Gallus gallus 75 kDa gelatinase mRNA, complete cds
Length = 2483
Score = 136 bits (342), Expect = 7e-30
Identities = 77/189 (40%), Positives = 105/189 (54%), Gaps = 1/189 (0%)
Frame = +1
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L ++GY+ + R S ++ A+ MQ+ G+ TG++D +T++ M+ PRCGV
Sbjct: 130 ENYLLRFGYIQEAEVRRS--SKHVSLAKALRRMQKQLGLEETGELDASTLEAMRAPRCGV 303
Query: 104 PDQTRGSSKFNIRRKRYALTGQ-KWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNV 162
PD G F G+ KW H + Y + N +P + A A RRAF VW +V
Sbjct: 304 PD-VGGFLTFE---------GELKWDHMDLTYRVMNYSPDLDRAVIDDAFRRAFKVWSDV 453
Query: 163 TPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPLTF ++ + DI I+F S HGD PFDG+ G LAHA+ PG GI GD HF
Sbjct: 454 TPLTFTQIY-------SGEADIMIMFGSQEHGDGYPFDGKDGLLAHAFPPGSGIQGDAHF 612
Query: 223 DSDEPWTLG 231
D DE WTLG
Sbjct: 613 DDDEFWTLG 639
Score = 109 bits (272), Expect = 9e-22
Identities = 79/284 (27%), Positives = 129/284 (44%), Gaps = 6/284 (2%)
Frame = +1
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
+++D+D+ W G G +FLVA HE GH+LGL+HS+ A+M P Y Y++ +F+L
Sbjct: 1126 SNYDTDKKW--GFCPDRGYSIFLVAAHEFGHSLGLDHSSVREALMYPMYSYVQ--DFQLH 1293
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYP- 338
DD+QGIQ +YG +SIP P
Sbjct: 1294 EDDVQGIQYLYGRGSGPEPTPPAPLPTEEPQSIPTEAGSASTTEEEEEETPEPTAEPSPV 1473
Query: 339 -GAKPNICDGNFNTLVILRREMFVFKDQWFWRVRNNRVMDGY--PMQITYFWRGLPPSID 395
++ + NF+ + + E+ FK+ +W ++ G I W GLP ID
Sbjct: 1474 DPSRDACMEKNFDAITEINGELHFFKNGKYW-THSSFWKSGTQGAFSIADTWPGLPAVID 1650
Query: 396 AVYENSEGNFV-FFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTY 454
A +++ V FF +FWVF P + LG G + I A+ GK
Sbjct: 1651 AAFQDVLTKRVFFFAGRQFWVFSGKNAVG--PRRIEKLGIGKEAGRITGAL-QRGRGKVL 1821
Query: 455 FFKGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKE 497
F G+ YWR +++++D GYP+ ++ G+P + F++++
Sbjct: 1822 LFSGEHYWRLDVKVQTVDKGYPRDTDDVFTGVPLDARNVFLYQD 1953
>dbj|AB057407.1|AB057407 Cyprinus carpio mRNA for matrix metalloproteinase 9, complete cds
Length = 2867
Score = 135 bits (341), Expect = 9e-30
Identities = 80/189 (42%), Positives = 102/189 (53%)
Frame = +3
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L++YGY+ + S L++ + A+ +QQ G+ TG +D+ TID MK+PRCGV
Sbjct: 279 EEYLKRYGYIDVL--QKSGLQAVVSTSKALMKLQQQLGLEETGSLDQPTIDAMKQPRCGV 452
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVT 163
PD IR + KW H + Y I N +P + A RAF VW +VT
Sbjct: 453 PD---------IRNYQTFEGDLKWDHTDVTYRILNYSPDMEAPLIDDAFARAFKVWSDVT 605
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PLTF L +G DI I F HGD PFDG+ G L HAY PG GI GD HFD
Sbjct: 606 PLTFTR-----LYDGT--ADIMISFGRENHGDPYPFDGKDGLLVHAYPPGEGIQGDAHFD 764
Query: 224 SDEPWTLGN 232
DE WTLG+
Sbjct: 765 DDEYWTLGS 791
Score = 121 bits (304), Expect = 2e-25
Identities = 81/290 (27%), Positives = 134/290 (45%), Gaps = 3/290 (1%)
Frame = +3
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
+++D+D+ W G G LFLVA HE GHALGL+HS A+M P Y+Y+E +F L
Sbjct: 1275 SNYDTDKKW--GFCPDKGYSLFLVAAHEFGHALGLDHSKIKDALMYPMYKYIE--DFSLN 1442
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
DD++GIQ +YG +P ++ G
Sbjct: 1443 QDDIEGIQYLYGPKTGPNPTPPKPKTTTSSPVVP-------TKPTPSEKTTTVSTTTHVG 1601
Query: 340 AKPNICD-GNFNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVY 398
+ C+ F+ + +++E+ FKD+ +W++ +N G P I+ W LP +I++ +
Sbjct: 1602 PSQDACEIKEFDAITEIQKELHFFKDRHYWKISSNGERKG-PFFISEKWPALPATINSAF 1778
Query: 399 ENS-EGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFK 457
E FF +FWV+ T + P + LG ++ + GK F
Sbjct: 1779 EEPLTKKIYFFADKQFWVY--TGKEVLGPRKIEKLGLPSDLDRVEGTV-QRGKGKVLLFN 1949
Query: 458 GDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFIKE 506
G +W+ + + +D GYP+ +++ G+P F+HK GF YF +E
Sbjct: 1950 GVNFWKLDVKAQMIDSGYPRSTDSVFGGVPIDSHDVFLHK--GFFYFCRE 2093
>dbj|D82052.1|D82052 Cynops pyrrhogaster mRNA for gelatinase-b, complete cds
Length = 3885
Score = 135 bits (340), Expect = 1e-29
Identities = 73/189 (38%), Positives = 105/189 (54%), Gaps = 1/189 (0%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+++GY+ + + + ++ A+ MQ+ G+N TG++D++T++ MK PRCGV
Sbjct: 209 ESYLERFGYIS----KRARSSTHVSLSKALLQMQKKLGLNETGELDQSTLEAMKTPRCGV 376
Query: 104 PDQTRGSSKFNIRRKRYALTGQ-KWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNV 162
PD + G KW H I + + N +P + A RRAF VW +V
Sbjct: 377 PDVGNFQT----------FDGDLKWDHNDITFRVLNYSPDLDGDVIEDAFRRAFKVWSDV 526
Query: 163 TPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
+PLTF ++ + DI I+F S HGD PFDG+ G LAHAY PG G+ GD HF
Sbjct: 527 SPLTFTQIY-------SGEADIMILFGSDDHGDPYPFDGKDGLLAHAYPPGEGVQGDAHF 685
Query: 223 DSDEPWTLG 231
D DE WTLG
Sbjct: 686 DDDEFWTLG 712
Score = 114 bits (285), Expect = 3e-23
Identities = 92/323 (28%), Positives = 144/323 (44%), Gaps = 11/323 (3%)
Frame = +2
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
+DSD W G G LFLV HE GHA+GLEHS A+M P ++Y+E F+L D
Sbjct: 1205 YDSDRKW--GFCPDQGYSLFLVGAHEFGHAIGLEHSTVRDALMYPMFRYIE--GFQLHQD 1372
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAK 341
D++G+Q +YG H S P +
Sbjct: 1373 DIEGVQYLYGSGTGP------------HPSPPMPTTKSPDVSGKTTTTVTTSPTTTTELV 1516
Query: 342 P-----NICDGN-FNTLVILRREMFVFKDQWFWRVRNNR--VMDGYPMQITYFWRGLPPS 393
P + C F+ + + ++ FKD +W+ + R + G P++I+ W LP
Sbjct: 1517 PVDPTTDACKVKAFDAITEIEGQLHFFKDGKYWKASSARPGAIKG-PVKISDTWPALPAI 1693
Query: 394 IDAVYENSEGNFVFFKSNK-FWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGK 452
ID+ +E+ +FF S + FWV+ TT+ P L LG G I ++ GK
Sbjct: 1694 IDSAFEDLLTKKIFFFSGRRFWVYTGTTVLG--PRGLEKLGIGKDVEKIVGSLQ-RGRGK 1864
Query: 453 TYFFKGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFIKEKSTGN 511
F GD+YWR + + +D GYP+ + G+P + F+++EN +F K++
Sbjct: 1865 VLLFNGDKYWRLDVKTQVVDKGYPRDTEDAFAGVPINAHDVFLYQEN--IHFCKDQFYWR 2038
Query: 512 STKMLRVEP-GYPRSILKDFMGC 533
T +V+ GY + D + C
Sbjct: 2039 MTPRRQVDQVGY---VKYDILNC 2098
>dbj|AB033755.1|AB033755 Oryzias latipes gel-b mRNA for gelatinase B, complete cds
Length = 2803
Score = 135 bits (339), Expect = 2e-29
Identities = 78/188 (41%), Positives = 103/188 (54%)
Frame = +1
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+K+GY+ + S +S + A+ MQ+ G++ TG++D T++ MK+PRCGV
Sbjct: 280 ESYLRKFGYMDTF--QRSGFQSLASTSKALKRMQRQLGLDETGQLDMQTLEAMKQPRCGV 453
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVT 163
PD + + KW H + Y I N +P + + T A RAF VW +VT
Sbjct: 454 PD---------VANYKTFDGDLKWDHGDVTYRILNYSPDLDSSVTDDAFARAFKVWSDVT 606
Query: 164 PLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PLTF L +G DI I F HGD PFDG+ G LAHAY PG GI GD HFD
Sbjct: 607 PLTFTR-----LFDGT--ADIMISFGKKDHGDLYPFDGKDGLLAHAYPPGEGIQGDAHFD 765
Query: 224 SDEPWTLG 231
DE WTLG
Sbjct: 766 DDEFWTLG 789
Score = 121 bits (304), Expect = 2e-25
Identities = 91/327 (27%), Positives = 139/327 (41%), Gaps = 4/327 (1%)
Frame = +1
Query: 217 GGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNF 276
G +D D+ W G G LFLVA HE GHALGL+HSN A+M P Y Y+E +F
Sbjct: 1267 GTTASYDDDKKW--GFCPDQGYSLFLVAAHEFGHALGLDHSNIRDALMYPMYSYVE--DF 1434
Query: 277 KLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXS 336
L DD++GIQ +YG + P
Sbjct: 1435 SLHEDDIEGIQYLYGSKTDPKPTVPQPKPPTTTATPDPDVTDSTDEPEPTNRPATTTLNP 1614
Query: 337 YPGAKPNICDGNFNTLVILRREMFVFKDQWFWRV-RNNRVMDGYPMQITYFWRGLPPSID 395
K F+T+ ++ +++ FKD FWR R PM I+ W LP ID
Sbjct: 1615 LDPTKDACKVTKFDTITVIGGDLYFFKDGHFWRKSRKGDAALESPMLISERWPALPAVID 1794
Query: 396 AVYENS-EGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTY 454
+ +E+ FF KFWV+ + P + LG ++ A+ + K
Sbjct: 1795 SAFEDILTKKLYFFSGTKFWVYTGKNVLG--PRSIEKLGLPDSVQKVEGALQ-KGKDKVL 1965
Query: 455 FFKGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFIKEKSTGNST 513
F G+ +WR + + +D GYPK I ++ G+P F+++ G T+F +++
Sbjct: 1966 LFSGENFWRLDVKTQKIDKGYPKYIDVVFGGVPIDAHDVFLYE--GRTFFCRDQFYWRMN 2139
Query: 514 KMLRVE-PGYPRSILKDFMGCDGPTDR 539
+V+ GY + D + C P+ R
Sbjct: 2140 SRRQVDRVGY---VKYDLLKCTNPSSR 2211
>gb|S75623.1|S75623 collagenase [Rana catesbeiana=bullfrags, stage X tadpoles, back
skin, mRNA, 1521 nt]
Length = 1521
Score = 135 bits (339), Expect = 2e-29
Identities = 85/215 (39%), Positives = 109/215 (50%), Gaps = 2/215 (0%)
Frame = +3
Query: 73 IAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALT--GQKWQHK 130
+ ++QF+G+ +TGK D T+ MK+ CGVPD Y LT +W++
Sbjct: 204 VEILKQFFGLKVTGKPDAETLV-MKQSTCGVPDVGE-----------YVLTPGNPRWENT 347
Query: 131 HIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFAS 190
H+ Y I+N TP + V+PLTF +V + DI I F
Sbjct: 348 HLTYRIENYTPDL------------------VSPLTFTKV-------SEGQADIMISFVR 452
Query: 191 GFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGH 250
G H D PFDG GG LAHA PGPGIGGD HFD E WT N +L+ VA HELGH
Sbjct: 453 GDHRDKYPFDGPGGNLAHASQPGPGIGGDAHFDEYERWT---KNFQDYNLYRVAAHELGH 623
Query: 251 ALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
+LGL HS D A+M P Y + +L DD+ G
Sbjct: 624 SLGLSHSTDIGALMYPTYL---RGDVQLSQDDIDG 719
Score = 43.9 bits (102), Expect = 0.046
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 3/137 (2%)
Frame = +3
Query: 342 PNICDGN--FNTLVILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 399
P +CD F+ + +R E+ FK +R NR F+ + + A YE
Sbjct: 759 PQVCDSKLTFDAITTVRGELMFFK------MRTNR-----------FYPEVELGLQAAYE 887
Query: 400 NSEGNFV-FFKSNKFWVFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKG 458
++ + V FFK NK+W + GYP D+ + S G + + E
Sbjct: 888 MADRDEVRFFKGNKYWAVSGQDVLYGYPKDIHS------SFGFPTGVAHE---------- 1019
Query: 459 DRYWRYGEEMRSMDPGY 475
W Y E +SMD GY
Sbjct: 1020--CWSYDEYKQSMDTGY 1064
>ref|NM_065193.1| protease
Length = 1560
Score = 133 bits (335), Expect = 4e-29
Identities = 87/268 (32%), Positives = 130/268 (48%), Gaps = 23/268 (8%)
Frame = +1
Query: 47 LQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106
++KYGYL D S + + A+ Q+ + TG VD T++ KPRC D
Sbjct: 184 MEKYGYLKGIDHS-----SPQEFRQALMFFQEVLEVEQTGNVDEMTVEAASKPRCTQTDV 348
Query: 107 TRGSSKFNIRRKRYALTGQ-KWQHKH-----IAYSIKNVTPKVGDAETRKAIRRAFDVWQ 160
+ +K R KR+ L+ + KW H + + I + T + ETRK + +AF +W
Sbjct: 349 RQEQTK---RTKRFTLSKRAKWAHASGQSVTLKWYISDYTSDIDRLETRKVVEKAFKLWS 519
Query: 161 NVTPLTFEEVPYIELE--NGKRDVDITIIFASGFHGDSSPFDGEGG---------FLAHA 209
+ + + E+ + + + K + DI I++A G HGD FDG G LAH
Sbjct: 520 SQSYIKNEKKVTLTFQEASSKDEADINILWAEGNHGDEHDFDGANGKIEGNKKENVLAHT 699
Query: 210 YFPGPG--IGGDTHFDSDEPWTLG--NPNHDGNDLFL--VAVHELGHALGLEHSNDPTAI 263
+FPG + GD HFD E W + H N F V HE+GHALGL+HS A+
Sbjct: 700 FFPGYARPLNGDIHFDDAEDWEIDVDQVGHGSNKRFFPYVLAHEIGHALGLDHSQKADAL 879
Query: 264 MAPFYQYMETDNFKLPNDDLQGIQKIYG 291
M P+Y+ + + +L DD G+ YG
Sbjct: 880 MHPYYKNVPINEIQLDIDDKCGVIWNYG 963
>ref|NM_022791.1| Homo sapiens matrix metalloproteinase 19 (MMP19), transcript
variant rasi-6, mRNA
Length = 2304
Score = 133 bits (335), Expect = 4e-29
Identities = 85/213 (39%), Positives = 118/213 (54%), Gaps = 5/213 (2%)
Frame = +1
Query: 84 MTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKV 143
++G++D T M++PRCG+ D FN + +Y L G +W+ KH+ + I N+ +
Sbjct: 247 VSGQLDDATRARMRQPRCGLEDP------FNQKTLKYLLLG-RWRKKHLTFRILNLPSTL 405
Query: 144 GDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGD-----SSP 198
R A+R+AF W NV PLTF+EV + G D+ ++ FHG S+
Sbjct: 406 PPHTARAALRQAFQDWSNVAPLTFQEV-----QAGAADIRLS------FHGRQSSYCSNT 552
Query: 199 FDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSN 258
FDG G LAHA P G HFD DE WT G + G +L ++A HE+GHALGL HS
Sbjct: 553 FDGPGRVLAHADIPEL---GSVHFDEDEFWTEG--TYRGVNLRIIAAHEVGHALGLGHSR 717
Query: 259 DPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
A+MAP Y+ +FKL DD+ GIQ +YG
Sbjct: 718 YSQALMAPVYEGYR-PHFKLHPDDVAGIQALYG 813
Score = 100 bits (249), Expect = 4e-19
Identities = 57/180 (31%), Positives = 94/180 (51%), Gaps = 2/180 (1%)
Frame = +2
Query: 356 RREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFV-FFKSNKFW 414
R + + FK + W V ++ G +++ W GLP ++DA + ++ FFK +K W
Sbjct: 1052 RGKTYAFKGDYVWTVSDSG--PGPLFRVSALWEGLPGNLDAAVYSPRTQWIHFFKGDKVW 1225
Query: 415 VFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPG 474
+ + + PG+P L + +D+A++W K + FKG YW++ E R+
Sbjct: 1226 RYINFKMSPGFPKKLNRV-----EPNLDAALYWPLNQKVFLFKGSGYWQWDELARTDFSS 1390
Query: 475 YPKPIT-IWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKMLRVEPGYPRSILKDFMGC 533
YPKPI ++ G+P P A + ++G YF K K + LRVE GYPR+I ++M C
Sbjct: 1391 YPKPIKGLFTGVPNQPSAA-MSWQDGRVYFFKGKVYWRLNQQLRVEKGYPRNISHNWMHC 1567
>gb|U38431.1|HSU38431 Human clone rasi-6 matrix metalloproteinase RASI-1 mRNA, splice
variant, complete cds
Length = 2304
Score = 133 bits (335), Expect = 4e-29
Identities = 85/213 (39%), Positives = 118/213 (54%), Gaps = 5/213 (2%)
Frame = +1
Query: 84 MTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKV 143
++G++D T M++PRCG+ D FN + +Y L G +W+ KH+ + I N+ +
Sbjct: 247 VSGQLDDATRARMRQPRCGLEDP------FNQKTLKYLLLG-RWRKKHLTFRILNLPSTL 405
Query: 144 GDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGD-----SSP 198
R A+R+AF W NV PLTF+EV + G D+ ++ FHG S+
Sbjct: 406 PPHTARAALRQAFQDWSNVAPLTFQEV-----QAGAADIRLS------FHGRQSSYCSNT 552
Query: 199 FDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSN 258
FDG G LAHA P G HFD DE WT G + G +L ++A HE+GHALGL HS
Sbjct: 553 FDGPGRVLAHADIPEL---GSVHFDEDEFWTEG--TYRGVNLRIIAAHEVGHALGLGHSR 717
Query: 259 DPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
A+MAP Y+ +FKL DD+ GIQ +YG
Sbjct: 718 YSQALMAPVYEGYR-PHFKLHPDDVAGIQALYG 813
Score = 100 bits (249), Expect = 4e-19
Identities = 57/180 (31%), Positives = 94/180 (51%), Gaps = 2/180 (1%)
Frame = +2
Query: 356 RREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFV-FFKSNKFW 414
R + + FK + W V ++ G +++ W GLP ++DA + ++ FFK +K W
Sbjct: 1052 RGKTYAFKGDYVWTVSDSG--PGPLFRVSALWEGLPGNLDAAVYSPRTQWIHFFKGDKVW 1225
Query: 415 VFKDTTLQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPG 474
+ + + PG+P L + +D+A++W K + FKG YW++ E R+
Sbjct: 1226 RYINFKMSPGFPKKLNRV-----EPNLDAALYWPLNQKVFLFKGSGYWQWDELARTDFSS 1390
Query: 475 YPKPIT-IWKGIPESPQGAFVHKENGFTYFIKEKSTGNSTKMLRVEPGYPRSILKDFMGC 533
YPKPI ++ G+P P A + ++G YF K K + LRVE GYPR+I ++M C
Sbjct: 1391 YPKPIKGLFTGVPNQPSAA-MSWQDGRVYFFKGKVYWRLNQQLRVEKGYPRNISHNWMHC 1567
>dbj|AB007816.1|AB007816 Caenorhabditis elegans mRNA for matrix metalloproteinase, partial
cds
Length = 1834
Score = 128 bits (322), Expect = 1e-27
Identities = 84/266 (31%), Positives = 128/266 (47%), Gaps = 21/266 (7%)
Frame = +1
Query: 47 LQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD- 105
++KYGYL D S + + A+ Q+ + TG VD T++ KPRC D
Sbjct: 541 MEKYGYLKGIDHS-----SPQEFRQALMFFQEVLEVEQTGNVDEMTVEAASKPRCTQTDV 705
Query: 106 ---QTRGSSKFNIRRKRYALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNV 162
QT+ + +F+ K + + Q + + I + T + ETRK + +AF +W +
Sbjct: 706 RQEQTKRTKRFS-SLKTSQVGARSGQSVTLKWYISDYTSDIDRLETRKVVEKAFKLWSSQ 882
Query: 163 TPLTFEEVPYIELE--NGKRDVDITIIFASGFHGDSSPFDGEGG---------FLAHAYF 211
+ + E+ + + + K + DI I++A G HGD FDG G LAH +F
Sbjct: 883 SYIKNEKKVTLTFQEASSKDEADINILWAEGNHGDEHDFDGANGKIEGNKKENVLAHTFF 1062
Query: 212 PGPG--IGGDTHFDSDEPWTLG--NPNHDGNDLFL--VAVHELGHALGLEHSNDPTAIMA 265
PG + GD HFD E W + H N F V HE+GHALGL+HS A+M
Sbjct: 1063PGYARPLNGDIHFDDAEDWEIDVDQVGHGSNKRFFPYVLAHEIGHALGLDHSQKADALMH 1242
Query: 266 PFYQYMETDNFKLPNDDLQGIQKIYG 291
P+Y+ + + +L DD G+ YG
Sbjct: 1243PYYKNVPINEIQLDIDDKCGVIWNYG 1320
>ref|NM_130068.1| Arabidopsis thaliana chromosome 2 CHR2v12152001 genomic sequence
Length = 1215
Score = 128 bits (321), Expect = 2e-27
Identities = 87/255 (34%), Positives = 124/255 (48%), Gaps = 10/255 (3%)
Frame = +1
Query: 47 LQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106
LQ+YGYLP V + + A+ Q+ G+ +TGK D +T+ + PRCG PD
Sbjct: 193 LQQYGYLPQNKESDDV-----SFEQALVRYQKNLGLPITGKPDSDTLSQILLPRCGFPDD 357
Query: 107 TRG-SSKFNIRRKRYALTGQ-KWQHK-----HIAYSIKNVTPKVGDAETRKAIRRAFDVW 159
++ F+ +K G+ +W A+S +N+TP + + R+ RRAF W
Sbjct: 358 VEPKTAPFHTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKW 537
Query: 160 QNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+V P++F E + DI I F +G HGD PFDG G LAH + P G
Sbjct: 538 ASVIPVSFIETEDYVI------ADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPE---NGR 690
Query: 220 THFDSDEPWTLGNPNHDGN---DLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNF 276
H D E W + + DL VAVHE+GH LGL HS+ A M P + +
Sbjct: 691 LHLDKAETWAVDFDEEKSSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLK-PRSKKV 867
Query: 277 KLPNDDLQGIQKIYG 291
L DD+ G+Q +YG
Sbjct: 868 NLNMDDVVGVQSLYG 912
>gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II section 241 of 255 of the complete
sequence. Sequence from clones T13E15, T14P1
Length = 87885
Score = 128 bits (321), Expect = 2e-27
Identities = 87/255 (34%), Positives = 124/255 (48%), Gaps = 10/255 (3%)
Frame = +1
Query: 47 LQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106
LQ+YGYLP V + + A+ Q+ G+ +TGK D +T+ + PRCG PD
Sbjct: 43489 LQQYGYLPQNKESDDV-----SFEQALVRYQKNLGLPITGKPDSDTLSQILLPRCGFPDD 43653
Query: 107 TRG-SSKFNIRRKRYALTGQ-KWQHK-----HIAYSIKNVTPKVGDAETRKAIRRAFDVW 159
++ F+ +K G+ +W A+S +N+TP + + R+ RRAF W
Sbjct: 43654 VEPKTAPFHTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKW 43833
Query: 160 QNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+V P++F E + DI I F +G HGD PFDG G LAH + P G
Sbjct: 43834 ASVIPVSFIETEDYVI------ADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPE---NGR 43986
Query: 220 THFDSDEPWTLGNPNHDGN---DLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNF 276
H D E W + + DL VAVHE+GH LGL HS+ A M P + +
Sbjct: 43987 LHLDKAETWAVDFDEEKSSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLK-PRSKKV 44163
Query: 277 KLPNDDLQGIQKIYG 291
L DD+ G+Q +YG
Sbjct: 44164 NLNMDDVVGVQSLYG 44208
>gb|BC006093.1|BC006093 Homo sapiens, matrix metalloproteinase 9 (gelatinase B, 92kD
gelatinase, 92kD type IV collagenase), clone MGC:12688
IMAGE:4054882, mRNA, complete cds
Length = 2373
Score = 127 bits (318), Expect = 4e-27
Identities = 78/200 (39%), Positives = 102/200 (51%), Gaps = 5/200 (2%)
Frame = +3
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L +YGY + R ++++ A+ +Q+ + TG++D T+ M+ PRCGV
Sbjct: 141 EEYLYRYGYTRVAEMR----GESKSLGPALLLLQKQLSLPETGELDSATLKAMRTPRCGV 308
Query: 104 PDQTRGSSKFNIRRKRYALTGQ-KWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNV 162
PD R + G KW H +I Y I+N + + A A RAF +W V
Sbjct: 309 PDLGRFQT----------FEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAV 458
Query: 163 TPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPLTF V RD DI I F HGD PFDG+ G LAHA+ PGPGI GD HF
Sbjct: 459 TPLTFTRVY-------SRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGPGIQGDAHF 617
Query: 223 DSDEPWTLGN----PNHDGN 238
D DE W+LG P GN
Sbjct: 618 DDDELWSLGKGVVVPTRFGN 677
Score = 96.7 bits (239), Expect = 6e-18
Identities = 82/312 (26%), Positives = 127/312 (40%), Gaps = 24/312 (7%)
Frame = +3
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
++FDSD+ W G G LFLVA HE GHALGL+HS+ P A+M P Y++ T+ L
Sbjct: 1134 SNFDSDKKW--GFCPDQGYSLFLVAAHEFGHALGLDHSSVPEALMYPMYRF--TEGPPLH 1301
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
DD+ GI+ +YG + PP P
Sbjct: 1302 KDDVNGIRHLYG--PRPEPEPRPPTTTTPQPTAPPTVCPTGPPTVHPSERPTAGPTGPPS 1475
Query: 340 AKP--------------------NICDGN-FNTLVILRREMFVFKDQWFWRVRNNR-VMD 377
A P + C+ N F+ + + ++++FKD +WR R
Sbjct: 1476 AGPTGPPTAGPSTATTVPLSPVDDACNVNIFDAIAEIGNQLYLFKDGKYWRFSEGRGSRP 1655
Query: 378 GYPMQITYFWRGLPPSIDAVYENS-EGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGI 436
P I W LP +D+V+E FF + WV+ ++ P L LG G
Sbjct: 1656 QGPFLIADKWPALPRKLDSVFEEPLSKKLFFFSGRQVWVYTGASVLG--PRRLDKLGLGA 1829
Query: 437 PSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVH 495
+ A+ GK F G R WR+ + + +DP + ++ G+P F +
Sbjct: 1830 DVAQVTGAL-RSGRGKMLLFSGRRLWRFDVKAQMVDPRSASEVDRMFPGVPLDTHDVFQY 2006
Query: 496 KENGFTYFIKEK 507
+E YF +++
Sbjct: 2007 REK--AYFCQDR 2036
>ref|NM_004994.1| Homo sapiens matrix metalloproteinase 9 (gelatinase B, 92kD
gelatinase, 92kD type IV collagenase) (MMP9), mRNA
Length = 2334
Score = 127 bits (318), Expect = 4e-27
Identities = 78/200 (39%), Positives = 102/200 (51%), Gaps = 5/200 (2%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L +YGY + R ++++ A+ +Q+ + TG++D T+ M+ PRCGV
Sbjct: 155 EEYLYRYGYTRVAEMR----GESKSLGPALLLLQKQLSLPETGELDSATLKAMRTPRCGV 322
Query: 104 PDQTRGSSKFNIRRKRYALTGQ-KWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNV 162
PD R + G KW H +I Y I+N + + A A RAF +W V
Sbjct: 323 PDLGRFQT----------FEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAV 472
Query: 163 TPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPLTF V RD DI I F HGD PFDG+ G LAHA+ PGPGI GD HF
Sbjct: 473 TPLTFTRVY-------SRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGPGIQGDAHF 631
Query: 223 DSDEPWTLGN----PNHDGN 238
D DE W+LG P GN
Sbjct: 632 DDDELWSLGKGVVVPTRFGN 691
Score = 96.7 bits (239), Expect = 6e-18
Identities = 82/312 (26%), Positives = 127/312 (40%), Gaps = 24/312 (7%)
Frame = +2
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
++FDSD+ W G G LFLVA HE GHALGL+HS+ P A+M P Y++ T+ L
Sbjct: 1148 SNFDSDKKW--GFCPDQGYSLFLVAAHEFGHALGLDHSSVPEALMYPMYRF--TEGPPLH 1315
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
DD+ GI+ +YG + PP P
Sbjct: 1316 KDDVNGIRHLYG--PRPEPEPRPPTTTTPQPTAPPTVCPTGPPTVHPSERPTAGPTGPPS 1489
Query: 340 AKP--------------------NICDGN-FNTLVILRREMFVFKDQWFWRVRNNR-VMD 377
A P + C+ N F+ + + ++++FKD +WR R
Sbjct: 1490 AGPTGPPTAGPSTATTVPLSPVDDACNVNIFDAIAEIGNQLYLFKDGKYWRFSEGRGSRP 1669
Query: 378 GYPMQITYFWRGLPPSIDAVYENS-EGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGI 436
P I W LP +D+V+E FF + WV+ ++ P L LG G
Sbjct: 1670 QGPFLIADKWPALPRKLDSVFEEPLSKKLFFFSGRQVWVYTGASVLG--PRRLDKLGLGA 1843
Query: 437 PSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVH 495
+ A+ GK F G R WR+ + + +DP + ++ G+P F +
Sbjct: 1844 DVAQVTGAL-RSGRGKMLLFSGRRLWRFDVKAQMVDPRSASEVDRMFPGVPLDTHDVFQY 2020
Query: 496 KENGFTYFIKEK 507
+E YF +++
Sbjct: 2021 REK--AYFCQDR 2050
>gb|J05070.1|HUM4COLA Human type IV collagenase mRNA, complete cds
Length = 2334
Score = 127 bits (318), Expect = 4e-27
Identities = 78/200 (39%), Positives = 102/200 (51%), Gaps = 5/200 (2%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L +YGY + R ++++ A+ +Q+ + TG++D T+ M+ PRCGV
Sbjct: 155 EEYLYRYGYTRVAEMR----GESKSLGPALLLLQKQLSLPETGELDSATLKAMRTPRCGV 322
Query: 104 PDQTRGSSKFNIRRKRYALTGQ-KWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNV 162
PD R + G KW H +I Y I+N + + A A RAF +W V
Sbjct: 323 PDLGRFQT----------FEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAV 472
Query: 163 TPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPLTF V RD DI I F HGD PFDG+ G LAHA+ PGPGI GD HF
Sbjct: 473 TPLTFTRVY-------SRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGPGIQGDAHF 631
Query: 223 DSDEPWTLGN----PNHDGN 238
D DE W+LG P GN
Sbjct: 632 DDDELWSLGKGVVVPTRFGN 691
Score = 96.7 bits (239), Expect = 6e-18
Identities = 82/312 (26%), Positives = 127/312 (40%), Gaps = 24/312 (7%)
Frame = +2
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
++FDSD+ W G G LFLVA HE GHALGL+HS+ P A+M P Y++ T+ L
Sbjct: 1148 SNFDSDKKW--GFCPDQGYSLFLVAAHEFGHALGLDHSSVPEALMYPMYRF--TEGPPLH 1315
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPG 339
DD+ GI+ +YG + PP P
Sbjct: 1316 KDDVNGIRHLYG--PRPEPEPRPPTTTTPQPTAPPTVCPTGPPTVHPSERPTAGPTGPPS 1489
Query: 340 AKP--------------------NICDGN-FNTLVILRREMFVFKDQWFWRVRNNR-VMD 377
A P + C+ N F+ + + ++++FKD +WR R
Sbjct: 1490 AGPTGPPTAGPSTATTVPLSPVDDACNVNIFDAIAEIGNQLYLFKDGKYWRFSEGRGSRP 1669
Query: 378 GYPMQITYFWRGLPPSIDAVYENS-EGNFVFFKSNKFWVFKDTTLQPGYPHDLITLGSGI 436
P I W LP +D+V+E FF + WV+ ++ P L LG G
Sbjct: 1670 QGPFLIADKWPALPRKLDSVFEEPLSKKLFFFSGRQVWVYTGASVLG--PRRLDKLGLGA 1843
Query: 437 PSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPI-TIWKGIPESPQGAFVH 495
+ A+ GK F G R WR+ + + +DP + ++ G+P F +
Sbjct: 1844 DVAQVTGAL-RSGRGKMLLFSGRRLWRFDVKAQMVDPRSASEVDRMFPGVPLDTHDVFQY 2020
Query: 496 KENGFTYFIKEK 507
+E YF +++
Sbjct: 2021 REK--AYFCQDR 2050
>dbj|AB044413.1|AB044413 Sus scrofa MMP-3 mRNA for matrix metalloproteinase-3, partial cds
Length = 418
Score = 127 bits (318), Expect = 4e-27
Identities = 67/153 (43%), Positives = 86/153 (55%)
Frame = +2
Query: 76 MQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIAYS 135
MQ+F G+ +TGK+D NT++ M KPRCGVPD S+ + KW+ + Y
Sbjct: 8 MQKFLGLEVTGKLDSNTLEVMHKPRCGVPDVGYFSTFPGL---------PKWRKNDLTYR 160
Query: 136 IKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGD 195
I N T + + I +A +W+ VTPLTF ++ + + DI I FA HGD
Sbjct: 161 IVNYTLDLPRSVIDSTIEKALKIWEEVTPLTFSKI-------SEGEADIMITFAVREHGD 319
Query: 196 SSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPW 228
SPFDG G LAHAY PGPGI GD HFD DE W
Sbjct: 320 FSPFDGPGKVLAHAYAPGPGIYGDAHFDDDEQW 418
>gb|U82541.1|XLU82541 Xenopus laevis matrix metalloproteinase (XMMP) mRNA, complete cds
Length = 3127
Score = 127 bits (318), Expect = 4e-27
Identities = 134/501 (26%), Positives = 197/501 (38%), Gaps = 78/501 (15%)
Frame = +2
Query: 57 DPRMSVLRSAETMQ--SAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD--------- 105
+PR V ++ Q A+ Q+ + +TG +D TI+ M KPRCGVPD
Sbjct: 341 NPRQEVAEPTKSPQFIDALKKFQKLNNLPVTGTLDDATINAMNKPRCGVPDNQMAKKETE 520
Query: 106 ----------QTRGSSKFN--------IRRKRYA------------------LTGQKWQH 129
+T+ S IRRKR+ TG+ +
Sbjct: 521 KPTAAQSLENKTKDSENVTQQNPDPPKIRRKRFLDMLMYSNKYREEQEALQKSTGKVFTK 700
Query: 130 KHIAYSI--KNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITII 187
K + + + + + ++ E R R AF +W V PL FEE L +DI +
Sbjct: 701 KLLKWRMIGEGYSNQLSINEQRYVFRLAFRMWSEVMPLDFEEDNTSPLSQ----IDIKLG 868
Query: 188 FASGFH-GDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVH 246
F G H G S FDG G AHA+F G D HFD DE +T + H G L VA H
Sbjct: 869 FGRGRHLGCSRAFDGSGQEFAHAWFLG-----DIHFDDDEHFTAPSSEH-GISLLKVAAH 1030
Query: 247 ELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXX 306
E+GH LGL H + +IM P Y + F+L D + IQ +YG
Sbjct: 1031EIGHVLGLSHIHRVGSIMQPNY-IPQDSGFELDLSDRRAIQNLYGS-------------- 1165
Query: 307 XXHRSIPPAXXXXXXXXXXXXXXXXXXXXSYPGAKPNICDGNFNTL-------------V 353
C+G F+T +
Sbjct: 1166--------------------------------------CEGPFDTAFDWIYKEKNQYGEL 1231
Query: 354 ILRREMFVFKDQWFWRV--RNNRVMDGYPMQITYFWRGLP-PSIDA---VYENSEGNFVF 407
++R + F++ W+W R+NR G P+ I W G+P +IDA V+ + F
Sbjct: 1232VVRYNTYFFRNSWYWMYENRSNRTRYGDPLAIANGWHGIPVQNIDAFVHVWTWTRDASYF 1411
Query: 408 FKSNKFWVFKDTTLQPGYPHD--------LITLG-SGIPSHGIDSAIWWEDVGKTYFFKG 458
FK ++W + D+ Y D LI+ G GIPS I++A + YFF+
Sbjct: 1412FKGTQYWRY-DSENDKAYAEDAQGKSYPRLISEGFPGIPS-PINAAYFDRRRQYIYFFRD 1585
Query: 459 DRYWRYGEEMRSMDPGYPKPI 479
+ + + + P +PK I
Sbjct: 1586SQVFAFDINRNRVAPDFPKRI 1648
Score = 56.2 bits (134), Expect = 9e-06
Identities = 39/141 (27%), Positives = 64/141 (44%), Gaps = 14/141 (9%)
Frame = +2
Query: 404 NFVFFKSNKFWVFKDTTLQPGYPHDLITLGS--GIPSHGIDSAI----WWEDVGKTYFFK 457
N FF+++ +W++++ + + Y L GIP ID+ + W D +YFFK
Sbjct: 1244 NTYFFRNSWYWMYENRSNRTRYGDPLAIANGWHGIPVQNIDAFVHVWTWTRDA--SYFFK 1417
Query: 458 GDRYWRYGEE------MRSMDPGYPKPITI-WKGIPESPQGAFVHKENGFTYFIKEKST- 509
G +YWRY E + YP+ I+ + GIP A+ + + YF ++
Sbjct: 1418 GTQYWRYDSENDKAYAEDAQGKSYPRLISEGFPGIPSPINAAYFDRRRQYIYFFRDSQVF 1597
Query: 510 GNSTKMLRVEPGYPRSILKDF 530
RV P +P+ IL F
Sbjct: 1598 AFDINRNRVAPDFPKRILDFF 1660
Score = 38.5 bits (88), Expect = 2.0
Identities = 30/138 (21%), Positives = 57/138 (40%), Gaps = 17/138 (12%)
Frame = +2
Query: 356 RREMFVFKDQWFWRV--RNNRVM------DGYPMQITYFWRGLPPSIDAVYENSEGNFV- 406
R + FK +WR N++ YP I+ + G+P I+A Y + ++
Sbjct: 1394 RDASYFFKGTQYWRYDSENDKAYAEDAQGKSYPRLISEGFPGIPSPINAAYFDRRRQYIY 1573
Query: 407 FFKSNKFWVF--KDTTLQPGYPHDLITLGSGI-----PSHGIDSAIWWEDVGKTYFFKGD 459
FF+ ++ + F + P +P ++ + P ID A + + FKG
Sbjct: 1574 FFRDSQVFAFDINRNRVAPDFPKRILDFFPAVAANNHPKGNIDVAYYSYTYSSLFLFKGK 1753
Query: 460 RYWR-YGEEMRSMDPGYP 476
+W+ ++ R +P P
Sbjct: 1754 EFWKVVSDKDRRQNPSLP 1807
>gb|AC005966.2|T2K10 Arabidopsis thaliana chromosome 1 BAC T2K10 sequence, complete
sequence
Length = 90284
Score = 125 bits (315), Expect = 9e-27
Identities = 97/276 (35%), Positives = 133/276 (48%), Gaps = 20/276 (7%)
Frame = +1
Query: 36 KAEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDW 95
K +QYF +++GY+ T + +QSAI Q+ + + +TGK+D +T+
Sbjct: 1588 KLKQYF------RRFGYITTTGNCTDDFD--DVLQSAINTYQKNFNLKVTGKLDSSTLRQ 1743
Query: 96 MKKPRCGVPDQTRGSSKFNIRR-----KRYALTGQK--W--QHKHIAYSI---KNVTPKV 143
+ KPRCG PD G S+ N + ++Y+ K W + + + Y+ N+T
Sbjct: 1744 IVKPRCGNPDLIDGVSEMNGGKILRTTEKYSFFPGKPRWPKRKRDLTYAFAPQNNLTD-- 1917
Query: 144 GDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEG 203
E ++ RAF W VTPL F I DI I F SG HGD PFDG
Sbjct: 1918 ---EVKRVFSRAFTRWAEVTPLNFTRSESI------LRADIVIGFFSGEHGDGEPFDGAM 2070
Query: 204 GFLAHAYFPGPGIGGDTHFDSDEPWTLGN--------PNHDGNDLFLVAVHELGHALGLE 255
G LAHA P G+ H D DE W + N P DL VAVHE+GH LGL
Sbjct: 2071 GTLAHASSPPTGM---LHLDGDEDWLISNGEISRRILPVTTVVDLESVAVHEIGHLLGLG 2241
Query: 256 HSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
HS+ AIM P + +L DD++GIQ +YG
Sbjct: 2242 HSSVEDAIMFPAISGGDR-KVELAKDDIEGIQHLYG 2346
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 22, 2002 12:59 AM
Number of letters in database: 602,804,554
Number of sequences in database: 1,166,659
Lambda K H
0.322 0.140 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,791,863,459
Number of Sequences: 1166659
Number of extensions: 62489698
Number of successful extensions: 250572
Number of sequences better than 10.0: 974
Number of HSP's better than 10.0 without gapping: 48473
Number of HSP's successfully gapped in prelim test: 9707
Number of HSP's that attempted gapping in prelim test: 159979
Number of HSP's gapped (non-prelim): 140200
length of query: 608
length of database: 1,632,590,616
effective HSP length: 141
effective length of query: 467
effective length of database: 1,468,091,697
effective search space: 685598822499
effective search space used: 685598822499
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 82 (36.2 bits)