TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(210 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,168,056 sequences; 626,783,262 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
gb|U34615.1|GGU34615 Gallus gallus homeobox protein CMIX mR... 203 8e-51
emb|AJ004903.1|GGJ004903 Gallus gallus mRNA for CMIX homeob... 112 2e-23
gb|AF154573.1|AF154573 Mus musculus homeobox protein MIX (M... 90 1e-16
gb|AF201959.1|AF201959 Mus musculus Mix-related homeobox pr... 90 1e-16
ref|NM_013729.1| Mus musculus Mix1 homeobox-like 1 (Xenopus... 90 1e-16
gb|AF135063.1|AF135063 Mus musculus Mix-like homeobox prote... 90 1e-16
ref|NM_031944.1| Homo sapiens Mix-like homeobox protein 1 (... 88 5e-16
gb|AF211891.1|AF211891 Homo sapiens Mix.1 homeobox-like pro... 88 5e-16
ref|XM_037300.5| Homo sapiens Mix-like homeobox protein 1 (... 88 5e-16
ref|NM_130940.1| Danio rerio mixer (mix), mRNA 81 5e-14
gb|AF121771.1|AF121771 Danio rerio homeodomain transcriptio... 81 5e-14
ref|XM_060436.2| Homo sapiens similar to dJ1109J22.1 (novel... 81 6e-14
gb|AF461039.1|AF461039 Mus musculus paired-type homeobox At... 81 6e-14
ref|NM_130865.1| Mus musculus diencephalon/mesencephalon-ex... 81 6e-14
gb|AF463513.1|AF463513 Mus musculus cerebellar-diencephalic... 81 6e-14
gb|AF421857.1| Mus musculus paired-like homeobox protein DM... 81 6e-14
gb|AF421858.1| Mus musculus paired-like homeobox protein DM... 81 6e-14
gb|AF461038.1|AF461038 Gallus gallus paired-type homeobox A... 81 6e-14
gb|U50745.1|XLU50745 Xenopus laevis homeobox protein Mix.2 ... 79 2e-13
gb|M27063.1|XELMIX1HB Xenopus laevis homeobox protein (Mix.... 79 2e-13
gb|BC010923.1|BC010923 Homo sapiens, Similar to cartilage p... 79 3e-13
ref|NM_006982.1| Homo sapiens cartilage paired-class homeop... 79 3e-13
gb|U31986.1|HSU31986 Human cartilage-specific homeodomain p... 79 3e-13
ref|NM_012921.1| Rattus norvegicus Cartilage homeo protein ... 79 3e-13
gb|L14018.1|RATCART1X Rat cartilage homeoprotein 1 (Cart-1)... 79 3e-13
gb|U15276.1|XLU15276 Xenopus laevis cartilage homeoprotein ... 79 3e-13
emb|AJ278856.1|PDU78856 Platynereis dumerilii mRNA for Otx ... 78 5e-13
ref|NM_007442.1| Mus musculus aristaless 4 (Alx4), mRNA 77 7e-13
gb|AF001465.1|MMAF001465 Mus musculus paired-type homeodoma... 77 7e-13
emb|AJ404888.1|HSA404888 Homo sapiens mRNA for homeodomain ... 77 7e-13
gb|AF092538.1|AF092538 Gallus gallus paired type homeodomai... 77 7e-13
gb|AF294629.1|AF294629 Homo sapiens aristaless-like 4 (ALX4... 77 7e-13
ref|XM_030752.1| Homo sapiens aristaless-like homeobox 4 (A... 77 7e-13
ref|NM_021926.1| Homo sapiens aristaless-like homeobox 4 (A... 77 7e-13
dbj|AB058691.1|AB058691 Homo sapiens mRNA for KIAA1788 prot... 77 7e-13
gb|AY040861.1| Scyliorhinus canicula homeobox protein Otx5 ... 77 9e-13
dbj|AB012299.1|AB012299 Lampetra japonica mRNA for LjOtxA, ... 76 1e-12
gb|AY040535.1| Schistocerca americana pairberry 1 transcrip... 76 1e-12
gb|AY036005.1| Danio rerio orthodenticle-related homeobox 5... 76 1e-12
dbj|AB011526.1|AB011526 Hemicentrotus pulcherrimus early ty... 76 1e-12
gb|U59830.1|LOU59830 Loligo opalescens Pax-6 mRNA, complete... 76 1e-12
dbj|AB061768.1|AB061768 Hemicentrotus pulcherrimus HpOtxL m... 76 1e-12
gb|S76899.1|S76899 SpOtx=orthodenticle-related protein [Str... 76 1e-12
ref|NM_021728.1| Homo sapiens orthodenticle homolog 2 (Dros... 76 2e-12
gb|AF154123.1|AF154123 Bos taurus cone-rod homeobox mRNA, c... 76 2e-12
dbj|AB028220.1|AB028220 Ptychodera flava mRNA for Pf-Otx, c... 76 2e-12
ref|NM_002584.1| Homo sapiens paired box gene 7 (PAX7), tra... 76 2e-12
emb|X96743.1|HSPAX7M H.sapiens mRNA for paired box containi... 76 2e-12
gb|AF254422.2|AF254422 Mus musculus paired box transcriptio... 76 2e-12
emb|X68884.1|MMOTX2 M.musculus Otx2 mRNA 76 2e-12
gb|BC016664.1|BC016664 Homo sapiens, cone-rod homeobox, clo... 76 2e-12
ref|NM_131251.1| Danio rerio orthodenticle homolog 2 (otx2)... 76 2e-12
gb|AE003466.1|AE003466 Drosophila melanogaster genomic scaf... 76 2e-12
gb|U14592.1|DRU14592 Danio rerio orthodenticle-related prot... 76 2e-12
dbj|D26173.1|ZEFOTX2 Zebrafish otx2 mRNA for otx homeoprote... 76 2e-12
ref|NM_021855.1| Rattus norvegicus cone-rod homeobox protei... 76 2e-12
ref|NM_000554.1| Homo sapiens cone-rod homeobox (CRX), mRNA 76 2e-12
gb|AF135838.1|AF135838 Rattus norvegicus homeodomain protei... 76 2e-12
gb|AF014370.1|AF014370 Danio rerio transcription factor PAX... 76 2e-12
dbj|AB021129.1|AB021129 Rattus norvegicus Crx mRNA for cone... 76 2e-12
ref|NM_014588.2| Homo sapiens visual system homeobox 1 homo... 76 2e-12
gb|AF176797.2|AF176797 Homo sapiens transcription factor VS... 76 2e-12
emb|Z35141.1|HSPAX7GE H.sapiens Pax-7 gene for transcriptio... 76 2e-12
emb|AJ000939.1|OLJ000939 Oryzias latipes, Otx2 gene 76 2e-12
gb|AF251033.1|AF251033 Homo sapiens homeodomain protein RIN... 76 2e-12
gb|AF251032.1|AF251032 Bos taurus homeodomain protein RINX ... 76 2e-12
gb|AF129932.1|AF129932 Herdmania curvata homeobox protein O... 76 2e-12
gb|AF014369.1|AF014369 Danio rerio transcription factor PAX... 76 2e-12
gb|AC007582.7| Drosophila melanogaster, chromosome 2R, regi... 76 2e-12
dbj|D87838.1|D87838 Gallus gallus mRNA for PAX7 protein, co... 76 2e-12
gb|BC016502.1|BC016502 Mus musculus, cone-rod homeobox cont... 76 2e-12
gb|BC017609.1|BC017609 Mus musculus, clone MGC:27657 IMAGE:... 76 2e-12
ref|NM_013945.1| Homo sapiens paired box gene 7 (PAX7), tra... 76 2e-12
gb|AF178670.1|AF178670 Gallus gallus homeobox protein Chx10... 76 2e-12
gb|AF024711.1|AF024711 Homo sapiens cone rod homeobox prote... 76 2e-12
ref|NM_007770.1| Mus musculus cone-rod homeobox containing ... 76 2e-12
gb|AY071593.1| Drosophila melanogaster RE64348 full length ... 76 2e-12
gb|AF099746.1|AF099746 Petromyzon marinus Otx mRNA, complet... 76 2e-12
gb|AF043740.1|AF043740 Branchiostoma floridae amphioxus Otx... 76 2e-12
gb|U77615.1|MMU77615 Mus musculus homeodomain protein (crx)... 76 2e-12
gb|AF014368.1|AF014368 Danio rerio transcription factor PAX... 76 2e-12
gb|AF411465.1|AF411465 Petromyzon marinus transcription fac... 76 2e-12
gb|AF381628.1|AF381628 Caenorhabditis elegans clone yk51g10... 75 3e-12
ref|NM_054068.1| Mus musculus visual system homeobox 1 homo... 75 3e-12
gb|AY056825.1| Mus musculus transcription factor VSX1 (Vsx1... 75 3e-12
gb|U19813.1|XLXOTX2S1 Xenopus laevis homeobox protein ortho... 75 3e-12
gb|AF391758.1|AF391758 Mus musculus homeodomain protein RIN... 75 3e-12
gb|L26509.1|XELORTHOAA Xenopus laevis orthodenticle-A like ... 75 3e-12
dbj|AB012300.1|AB012300 Lampetra japonica mRNA for LjOtxB, ... 75 3e-12
ref|NM_075472.1| Caenorhabditis elegans 75 3e-12
emb|Z46972.1|XLOTXNUC X.laevis mRNA for homeobox protein 75 3e-12
ref|NM_075473.1| Caenorhabditis elegans 75 3e-12
gb|AF395732.1|AF395732 Mus musculus visual system homeobox ... 75 3e-12
emb|AJ223614.1|TRC223614 Tribolium castaneum mRNA for ortho... 75 3e-12
ref|NM_078536.1| Drosophila melanogaster ocelliless (oc), mRNA 75 3e-12
emb|X58983.1|DMOTD D.melanogaster otd gene for orthodenticl... 75 3e-12
ref|NM_059845.1| homeobox protein (otd subfamily) 75 3e-12
gb|AF381629.1|AF381629 Caenorhabditis elegans homeodomain p... 75 3e-12
gb|AF381627.1|AF381627 Caenorhabditis elegans clone yk345e3... 75 3e-12
dbj|D84062.1|D84062 Halocynthia roretzi mRNA for otx/orthod... 75 3e-12
emb|AJ251846.1|XLA251846 Xenopus laevis mRNA for OTX5b prot... 75 3e-12
gb|U31537.1|CEU31537 Caenorhabditis elegans variable abnorm... 75 3e-12
gb|U29184.1|CEU29184 Caenorhabditis elegans (mab-18) mRNA, ... 75 3e-12
ref|NM_077358.1| Caenorhabditis elegans 75 3e-12
gb|U29145.1|CEU29145 Caenorhabditis elegans (mab-18) mRNA, ... 75 3e-12
ref|XM_002147.4| Homo sapiens aristaless-like homeobox 3 (A... 75 3e-12
gb|AF305499.1|AF305499 Ciona intestinalis Otx mRNA, complet... 75 3e-12
ref|NM_007441.1| Mus musculus aristaless 3 (Alx3), mRNA 75 3e-12
gb|U96109.1|MMU96109 Mus musculus proline-rich transcriptio... 75 3e-12
gb|M14941.1|DROPRD41 D.melanogaster PRD mRNA clone BSH4, ho... 75 3e-12
ref|NM_077357.1| 'Paired box' domain, homeobox protein (pai... 75 3e-12
ref|NM_006492.1| Homo sapiens aristaless-like homeobox 3 (A... 75 3e-12
gb|AF008203.1|AF008203 Homo sapiens homeobox protein (Alx3)... 75 3e-12
dbj|AB057732.1|AB057732 Ciona savignyi Cs-OTX mRNA, complet... 75 3e-12
dbj|AB034702.1|AB034702 Xenopus laevis Xotx5 mRNA, complete... 75 3e-12
emb|X81403.1|MAALX3 M.auratus mRNA for alx3 75 3e-12
ref|NM_053869.1| Rattus norvegicus aristaless (Drosophila) ... 75 4e-12
gb|U25967.1|RNU25967 Rattus norvegicus Arix1 homeodomain pr... 75 4e-12
ref|NM_131333.1| Danio rerio visual system homeobox 1 prote... 75 4e-12
gb|AF025348.2|AF025348 Danio rerio paired-like homeobox pro... 75 4e-12
gb|U07056.1|CAU07056 Carassius auratus Vsx-1 homeobox prote... 75 4e-12
emb|AJ250404.1|OLA250404 Oryzias latipes mRNA for Vsx2 tran... 75 4e-12
ref|NM_013109.1| Rattus norvegicus Orthodenticle (Drosophi... 75 4e-12
gb|L32602.1|RATOTX1X Rattus norvegicus OTX1 mRNA, complete cds 75 4e-12
ref|NM_007701.1| Mus musculus C. elegans ceh-10 homeo domai... 75 4e-12
dbj|AB041043.1|AB041043 Stichopus japonicus Sj-Otx mRNA for... 75 4e-12
gb|L34808.1|MUSCHX10A Mus musculus (clone 6) homeobox prote... 75 4e-12
gb|BC007621.1|BC007621 Homo sapiens, Similar to Orthodentic... 75 4e-12
emb|X68883.1|MMOTX1 M.musculus Otx1 mRNA 75 4e-12
gb|AY040536.1| Schistocerca americana pairberry 2 transcrip... 75 4e-12
gb|AF178671.1|AF178671 Gallus gallus homeobox protein Chx10... 75 4e-12
ref|XM_049268.1| Homo sapiens similar to HOMEOBOX PROTEIN O... 75 4e-12
ref|NM_005169.1| Homo sapiens aristaless homeobox (Drosophi... 75 4e-12
gb|AF004318.1|AF004318 Carassius auratus paired-like homeob... 75 4e-12
emb|AJ223627.1|TCAJ3627 Tribolium castaneum mRNA for orthod... 75 4e-12
ref|NM_008888.1| Mus musculus paired mesoderm homeobox 2b (... 75 4e-12
dbj|AB066289.1|AB066289 Leucopsarion petersii otx1 gene for... 75 4e-12
emb|Y14493.1|MMPHOX2B Mus musculus mRNA for PHOX2b protein 75 4e-12
ref|XM_084561.1| Homo sapiens aristaless homeobox (Drosophi... 75 4e-12
gb|U20792.1|MMU20792 Mus musculus Pax7 mRNA, partial cds 75 4e-12
ref|XM_003368.1| Homo sapiens paired mesoderm homeobox 2b (... 75 4e-12
ref|NM_003924.2| Homo sapiens paired mesoderm homeobox 2b (... 75 4e-12
dbj|D82344.1|D82344 Homo sapiens mRNA for NBPhox, complete cds 75 4e-12
ref|XM_063425.1| Homo sapiens similar to Homeobox protein C... 75 4e-12
ref|NM_008887.1| Mus musculus aristaless homeobox gene homo... 75 4e-12
emb|X75014.1|MMPHOXH M.musculus Phox2 mRNA for homeodomain ... 75 4e-12
gb|BC017199.1|BC017199 Homo sapiens, paired mesoderm homeob... 75 4e-12
dbj|D26172.1|ZEFOTX1 Zebrafish otx1 mRNA for otx homeoprote... 74 6e-12
ref|NM_131250.1| Danio rerio orthodenticle homolog 1 (otx1)... 74 6e-12
gb|U14591.1|DRU14591 Danio rerio orthodenticle-related prot... 74 6e-12
gb|AY029294.1| Xenopus laevis transcription factor Otx1 (Ot... 74 6e-12
gb|BC008826.1|BC008826 Homo sapiens, paired box gene 3 (Waa... 74 7e-12
gb|AF165886.1|AF165886 Branchiostoma floridae paired-box tr... 74 7e-12
gb|AF178854.1|AF178854 Synthetic construct Pax3-forkhead fu... 74 7e-12
gb|U14621.1|PLU14621 Paracentrotus lividus Pax-6 (suPax-6) ... 74 7e-12
gb|L07483.1|HUMPBH3B Homo sapiens paired-box protein (PAX3)... 74 7e-12
gb|AF160992.1|AF160992 Podocoryne carnea (jellyfish) homeod... 74 7e-12
ref|NM_131277.1| Danio rerio paired box gene 3 (pax3), mRNA 74 7e-12
gb|AF014366.1|AF014366 Danio rerio transcription factor PAX... 74 7e-12
ref|NM_008781.1| Mus musculus paired box gene 3 (Pax3), mRNA 74 7e-12
gb|AF000673.1|AF000673 Coturnix coturnix paired-box transcr... 74 7e-12
emb|X59358.1|MMPAX3R Mouse Pax-3 gene for a DNA binding pro... 74 7e-12
dbj|AK014337.1|AK014337 Mus musculus 14, 17 days embryo hea... 74 7e-12
gb|U02368.1|HSU02368 Human PAX3/forkhead transcription fact... 74 7e-12
emb|X95594.1|LSPAX6GEN L.sanguineus pax6 gene 74 7e-12
ref|NM_077965.1| Homeobox domain 74 7e-12
dbj|D84254.1|D84254 Halocynthia roretzi mRNA for Pax-37, co... 74 1e-11
gb|AE003634.1|AE003634 Drosophila melanogaster genomic scaf... 74 1e-11
ref|NM_131215.1| Danio rerio orthodenticle homolog 3 (otx3)... 74 1e-11
dbj|D26174.1|ZEFOTX3 Zebrafish otx3 mRNA for otx homeoprote... 74 1e-11
ref|NM_131462.1| Danio rerio C. elegans CEH-10 homeodomain-... 74 1e-11
gb|U62898.1|DRU62898 Danio rerio ALX (alx) mRNA, complete cds 74 1e-11
ref|NM_078832.1| Drosophila melanogaster paired (prd), mRNA 74 1e-11
gb|AY059447.1| Drosophila melanogaster GH22686 full length ... 74 1e-11
gb|AC011066.5|AC011066 Drosophila melanogaster, chromosome ... 74 1e-11
gb|M14548.1|DROPRD D.melanogaster paired gene (prd) encodin... 74 1e-11
gb|AY038071.1| Homo sapiens aristaless-related homeobox pro... 72 1e-11
gb|AF068263.1|AF068263 Xenopus laevis Mix-like endodermal r... 73 1e-11
ref|NM_065850.1| Caenorhabditis elegans 73 1e-11
gb|AF081350.1|AF081350 Xenopus laevis homeodomain protein M... 73 1e-11
gb|M85303.1|SCMSMOXIII Schistosoma mansoni paired-like home... 73 2e-11
ref|NM_077459.1| homeobox protein (otd subfamily) 73 2e-11
ref|NM_007492.1| Mus musculus aristaless related homeobox g... 72 2e-11
dbj|AB006103.1|AB006103 Mus musculus mRNA for Arx homeoprot... 72 2e-11
ref|NM_131384.1| Danio rerio aristaless related homeobox ge... 72 2e-11
dbj|AB006104.1|AB006104 Danio rerio mRNA for Arx homeoprote... 72 2e-11
gb|AF241311.1|AF241311 Acropora millepora transcription fac... 72 2e-11
dbj|AB061220.1|AB061220 Lampetra japonica mRNA for paired b... 72 2e-11
ref|NM_079110.1| Drosophila melanogaster Putative homeodoma... 72 3e-11
dbj|AB017632.1|AB017632 Dugesia japonica mRNA for DjPax-6, ... 72 3e-11
gb|AF081948.1|AF081948 Girardia tigrina homeobox protein (O... 72 3e-11
dbj|AB008834.1|AB008834 Dugesia japonica DjotxA mRNA, compl... 72 3e-11
gb|AY028904.1| Girardia tigrina Pax6A mRNA, partial cds 72 3e-11
emb|AJ307468.1|MMU307468 Mus musculus mRNA for paired box p... 72 4e-11
emb|Y19199.1|MMUY19199 Mus musculus partial Pax-6 gene for ... 72 4e-11
emb|Y19198.1|MMUY19198 Mus musculus partial Pax-6 gene for ... 72 4e-11
emb|Y19197.1|MMUY19197 Mus musculus partial Pax-6 gene for ... 72 4e-11
gb|AF169414.1|AF169414 Ambystoma mexicanum paired-box trans... 72 4e-11
dbj|D87837.1|D87837 Gallus gallus mRNA for PAX6 protein, co... 72 4e-11
emb|AJ223441.1|BFL223441 Branchiostoma floridae Pax6 gene (... 72 4e-11
gb|AF169412.1|AF169412 Ambystoma mexicanum paired-box trans... 72 4e-11
ref|NM_013627.1| Mus musculus paired box gene 6 (Pax6), mRNA 72 4e-11
emb|X63963.1|MMPAX6PBP M.musculus pax-6 mRNA for paired box... 72 4e-11
ref|NM_001604.2| Homo sapiens paired box gene 6 (aniridia, ... 72 4e-11
gb|AF154556.1|AF154556 Xenopus laevis paired domain transcr... 72 4e-11
gb|AF154555.1|AF154555 Xenopus laevis paired domain transcr... 72 4e-11
emb|Y07547.1|AFPAX6C72 Astyanax fasciatus mRNA for PAX-6 pr... 72 4e-11
gb|U77532.1|XLU77532 Xenopus laevis Pax6 mRNA, complete cds 72 4e-11
dbj|D88741.1|D88741 Cynops pyrrhogaster mRNA for PAX6 LL, P... 72 4e-11
emb|AJ223444.1|BFL223444 Branchiostoma floridae Pax6 gene (... 72 4e-11
gb|BC011953.1|BC011953 Homo sapiens, Similar to paired box ... 72 4e-11
dbj|AK019971.1|AK019971 Mus musculus 8 days embryo whole bo... 72 4e-11
gb|M77842.1|MUSSEYA Mus musculus oculorhombin (Sey) mRNA, c... 72 4e-11
ref|NM_009116.1| Mus musculus paired related homeobox 2 (Pr... 72 4e-11
emb|X52875.1|MMHOMEOS8 Mouse homeobox gene Prx2 mRNA 72 4e-11
ref|NM_013001.1| Rattus norvegicus Paired box homeotic gene... 72 4e-11
gb|AF169413.1|AF169413 Ambystoma mexicanum paired-box trans... 72 4e-11
gb|U69644.1|RNU69644 Rattus norvegicus Pax-6 mRNA, comlete cds 72 4e-11
ref|NM_131304.1| Danio rerio paired box gene 6a (pax6a), mRNA 72 4e-11
emb|X63183.1|BRPAX6 B.rerio pax-6 mRNA 72 4e-11
gb|AF114441.1|AF114441 Hydra vulgaris homeobox protein Otx ... 72 4e-11
gb|U76386.1|XLU76386 Xenopus laevis paired-type homeodomain... 72 4e-11
ref|NM_016307.2| Homo sapiens paired related homeobox prote... 72 4e-11
gb|AF061970.1|AF061970 Homo sapiens paired related homeobox... 72 4e-11
gb|U77178.1|TAU77178 Triturus alpestris paired box homeodom... 72 4e-11
emb|AJ000938.1|OLJ000938 Oryzias latipes, Pax6 gene 72 4e-11
dbj|AB002408.1|AB002408 Oryzias sp. mRNA for mdkPax-6, part... 72 4e-11
emb|X61389.1|BRPAXZFA B.rerio mRNA for Pax[zf-a] 72 4e-11
ref|NM_000280.1| Homo sapiens paired box gene 6 (aniridia, ... 72 4e-11
gb|AF154553.1|AF154553 Xenopus laevis paired domain transcr... 72 4e-11
gb|M93650.1|HUMPAX6AN Human paired box gene (PAX6) homologu... 72 4e-11
gb|AY047583.1| Homo sapiens paired box protein PAX6 (PAX6) ... 72 4e-11
emb|Y07546.1|AFPAX6C23 Astyanax fasciatus mRNA for PAX-6 pr... 72 4e-11
gb|AF154552.1|AF154552 Xenopus laevis paired domain transcr... 72 4e-11
emb|Y19195.1|MMUY19195 Mus musculus partial Pax-6 gene for ... 72 4e-11
emb|AJ223440.1|BFL223440 Branchiostoma floridae Pax6 gene (... 72 4e-11
emb|X79695.1|GGPRX2 G.gallus Prx-2 (S8) mRNA 72 4e-11
gb|U64513.1|XLU64513 Xenopus laevis Xpax6 mRNA, complete cds 72 4e-11
ref|NM_131641.1| Danio rerio paired box gene 6b (pax6b), mRNA 72 4e-11
gb|BC014645.1|BC014645 Homo sapiens, Similar to paired rela... 72 4e-11
gb|BC011272.1|BC011272 Mus musculus, clone MGC:18454 IMAGE:... 72 4e-11
gb|AF061252.1|AF061252 Danio rerio Pax-family transcription... 72 4e-11
gb|AF443223.1|AF443223 Mus musculus PAX6 mRNA, partial cds,... 72 4e-11
dbj|AB079883.1| Ciona intestinalis mRNA for Pax6, complete cds 72 4e-11
gb|S74393.1|S74393 Pax-6 [rats, small eye rSey, mRNA Partia... 72 4e-11
gb|AF154557.1|AF154557 Xenopus laevis paired domain transcr... 72 4e-11
gb|AF154554.1|AF154554 Xenopus laevis paired domain transcr... 72 4e-11
gb|AF169415.1|AF169415 Ambystoma mexicanum paired-box trans... 72 4e-11
gb|AY064175.1| Mus musculus Pax6 paired-less isoform mRNA, ... 72 4e-11
emb|X70475.1|CCPAX C. coturnix mRNA for paired box and home... 72 4e-11
emb|Y07548.1|AFPAX6E24 Astyanax fasciatus mRNA for PAX-6 pr... 72 4e-11
emb|AJ292077.1|MMU292077 Mus musculus partial mRNA for pair... 72 4e-11
gb|U67887.1|XLU67887 Xenopus laevis XLPAX6 (Pax6) mRNA, com... 72 4e-11
gb|M77844.1|HUMOCLHMB H.sapiens oculorhombin (aniridia) mRN... 72 4e-11
gb|AF457141.1|AF457141 Mus musculus Pax6 paired-less isofor... 72 4e-11
gb|U81600.1|HSU81600 Homo sapiens paired-like homeodomain p... 72 4e-11
gb|S69508.1|S69508 Pax-6=transcription factor [chickens, em... 72 4e-11
emb|AJ223442.1|BFL223442 Branchiostoma floridae Pax6 gene (... 72 4e-11
gb|AY051487.1| Drosophila melanogaster GH14454 full length ... 71 5e-11
emb|Y19196.1|MMUY19196 Mus musculus partial Pax-6 gene for ... 71 5e-11
gb|AF126249.1|AF126249 Hydra vulgaris homeobox protein mana... 71 5e-11
gb|U29174.1|RNU29174 Rattus norvegicus paired-like homeodom... 71 5e-11
dbj|AK012493.1|AK012493 Mus musculus 11 days embryo whole b... 71 5e-11
ref|NM_079899.1| Drosophila melanogaster twin of eyeless (t... 71 5e-11
gb|AF134350.1|AF134350 Drosophila melanogaster transcriptio... 71 5e-11
gb|U73177.1|MMU73177 Mus musculus paired-type homeobox (rax... 71 5e-11
dbj|AB066290.1|AB066290 Leucopsarion petersii otx3 gene for... 71 5e-11
gb|S69088.1|S69088 gMHox=homeobox [chickens, stage 17 embry... 71 6e-11
dbj|AK008428.1|AK008428 Mus musculus adult male small intes... 71 6e-11
ref|NM_006902.2| Homo sapiens paired mesoderm homeo box 1 (... 71 6e-11
gb|AF461698.1|AF461698 Gallus gallus paired-related homeobo... 71 6e-11
gb|U03873.1|MMU03873 Mus musculus homeobox (Pmx) mRNA, comp... 71 6e-11
ref|NM_022716.1| Homo sapiens paired mesoderm homeo box 1 (... 71 6e-11
ref|NM_013833.1| Mus musculus retina and anterior neural fo... 71 6e-11
gb|AF001906.1|AF001906 Mus musculus retinal homeobox protei... 71 6e-11
ref|NM_011127.1| Mus musculus paired related homeobox 1 (Pr... 71 6e-11
emb|X59725.1|MMHOBOXG M.musculus mRNA for homeobox gene 71 6e-11
gb|M95929.1|HUMPHOX1A Human homeobox protein (PHOX1) mRNA, ... 71 6e-11
gb|S82911.1|S82911 rHox=rHox protein [rats, ROS 17/2.8 oste... 71 6e-11
dbj|AK019503.1|AK019503 Mus musculus 0 day neonate skin cDN... 71 6e-11
dbj|D13433.1|CHKPRX1 Gallus gallus paired-related homeobox ... 71 6e-11
gb|L06502.1|MUSMHOX Mus musculus MHox protein mRNA, complet... 71 6e-11
emb|AJ007939.1|OLA7939 Oryzias latipes Rx2 gene 70 8e-11
emb|AJ250405.1|OLA250405 Oryzias latipes mRNA for Rx2 trans... 70 8e-11
dbj|D88737.1|D88737 African clawed frog mRNA for Xenopus Pa... 70 8e-11
emb|Y09975.1|PMPAX6 P.mammillata mRNA for Pax-6 70 8e-11
ref|NM_008759.1| Mus musculus OG9 homeobox gene (Og9x), mRNA 70 8e-11
dbj|D88738.1|D88738 African clawed frog mRNA for Xenopus Pa... 70 8e-11
ref|NM_013435.1| Homo sapiens retinal homeobox protein (RX)... 70 8e-11
gb|AF115392.1|AF115392 Homo sapiens retinal homeobox protei... 70 8e-11
ref|NM_053678.1| Rattus norvegicus retina and anterior neur... 70 8e-11
gb|AF135839.1|AF135839 Rattus norvegicus homeodomain protei... 70 8e-11
gb|U02308.1|HSU02308 Human PAX-3-FKHR gene fusion mRNA, par... 70 8e-11
gb|AC087231.1|AC087231 Caenorhabditis briggsae cosmid CB034... 70 8e-11
gb|U02309.1|HSU02309 Human PAX-3 mRNA, partial cds 70 8e-11
emb|AJ223443.1|BFL223443 Branchiostoma floridae Pax6 gene (... 70 1e-10
ref|NM_079139.1| Drosophila melanogaster gooseberry (gsb), ... 70 1e-10
gb|M14942.1|DROPRD92 D.melanogaster paired mRNA clone BSH9,... 70 1e-10
ref|NM_023951.1| Rattus norvegicus OG9 homeobox gene (Og9x)... 70 1e-10
ref|NM_079889.1| Drosophila melanogaster eyeless (ey), mRNA 70 1e-10
gb|BC018709.1|BC018709 Homo sapiens, hypothetical protein M... 70 1e-10
emb|X79493.1|DMEYEL29 D.melanogaster ey mRNA (exons 2-9) 70 1e-10
gb|AF003151.3| Caenorhabditis elegans cosmid D1007, complet... 70 1e-10
gb|AF001049.1|XLAF001049 Xenopus laevis retinal homeobox 2A... 70 1e-10
ref|XM_079165.1| aristaless, mRNA 70 1e-10
gb|L08401.1|DROPRDHBA Drosophila melanogaster prd-type home... 70 1e-10
emb|AJ223300.1|DMAJ3300 Drosophila melanogaster mRNA for ho... 70 1e-10
ref|XM_079956.1| Rx, mRNA 70 1e-10
ref|NM_032753.1| Homo sapiens hypothetical protein MGC15631... 70 1e-10
gb|BC007284.1|BC007284 Homo sapiens, Similar to retina and ... 70 1e-10
ref|NM_131226.1| Danio rerio retinal homeobox gene 2 (rx2),... 70 1e-10
ref|NM_058992.1| homeobox protein 70 1e-10
gb|AF001908.1|AF001908 Danio rerio retinal homeobox protein... 70 1e-10
emb|Y15516.1|HVY15516 Hydra vulgaris mRNA for prdl-b protei... 70 1e-10
gb|AF264703.1|AF264703 Astyanax mexicanus retinal homeobox ... 70 1e-10
gb|AF017273.1|AF017273 Xenopus laevis retinal homeobox 1 (X... 70 1e-10
ref|NM_131225.1| Danio rerio retinal homeobox gene 1 (rx1),... 70 1e-10
gb|AF001907.2|AF001907 Danio rerio retinal homeobox protein... 70 1e-10
gb|AF272397.1|AF272397 Caenorhabditis elegans CEH-17 (ceh-1... 70 1e-10
gb|AF001048.1|XLAF001048 Xenopus laevis retinal homeobox 1A... 70 1e-10
dbj|AB015750.1|AB015750 Gallus gallus mRNA for homeobox pro... 70 1e-10
ref|XM_084033.1| Homo sapiens hypothetical protein MGC15631... 70 1e-10
emb|AJ299416.1|CIN299416 Ciona intestinalis mRNA for Prx1 t... 70 1e-10
dbj|D85080.1|D85080 Sea urchin homeobox (Spalx) mRNA, parti... 70 1e-10
dbj|AB020318.1|AB020318 Gallus gallus mRNA for homeobox pro... 70 1e-10
ref|NM_017179.1| Rattus norvegicus Unc4.1 homeobox (C. eleg... 70 1e-10
dbj|D87748.1|D87748 Rattus norvegicus mRNA for paired-type ... 70 1e-10
gb|AF218357.1|AF218357 Homo sapiens homeodomain protein MIX... 70 1e-10
gb|U89331.1|HSU89331 Human pseudoautosomal homeodomain-cont... 69 2e-10
dbj|AB017633.1|AB017633 Dugesia japonica mRNA for Djrax, pa... 69 2e-10
gb|U67055.1|MMU67055 Mus musculus OG12b homeodomain protein... 69 2e-10
gb|AY069033.1| Drosophila melanogaster GH01528 full length ... 69 2e-10
ref|NM_013028.1| Rattus norvegicus Short stature homeobox 2... 69 2e-10
emb|AJ002259.1|RN2259 Rattus Norvegicus mRNA for Prx3A" pro... 69 2e-10
ref|NM_006883.1| Homo sapiens short stature homeobox (SHOX)... 69 2e-10
ref|NM_003030.2| Homo sapiens short stature homeobox 2 (SHO... 69 2e-10
emb|AJ298300.1|OLA298300 Oryzias latipes mRNA for Rx3 protein 69 2e-10
ref|NM_131227.1| Danio rerio retinal homeobox gene 3 (rx3),... 69 2e-10
gb|AF001909.1|AF001909 Danio rerio retinal homeobox protein... 69 2e-10
ref|NM_006884.1| Homo sapiens short stature homeobox 2 (SHO... 69 2e-10
gb|AF001393.1|AF001393 Oryzias latipes Medaka OG-12 (MOG-12... 69 2e-10
emb|AJ002367.1|HSSHOTA Homo sapiens mRNA for homeobox prote... 69 2e-10
ref|XM_030575.1| Homo sapiens short stature homeobox (SHOX)... 69 2e-10
emb|AJ238668.1|DME238668 Drosophila melanogaster mRNA for M... 69 2e-10
ref|NM_057982.1| Drosophila melanogaster PvuII-PstI homolog... 69 2e-10
ref|NM_079075.1| Drosophila melanogaster orthopedia (otp), ... 69 2e-10
ref|NM_000451.2| Homo sapiens short stature homeobox (SHOX)... 69 2e-10
ref|NM_013665.1| Mus musculus short stature homeobox 2 (Sho... 69 2e-10
gb|U66918.1|MMU66918 Mus musculus OG-12a homeodomain protei... 69 2e-10
gb|AF247550.1|AF247550 Mus musculus UNC4 protein mRNA, comp... 69 2e-10
emb|AJ002258.1|RN2258 Rattus Norvegicus mRNA for Prx3A protein 69 2e-10
ref|NM_013702.1| Mus musculus Unc4.1 homeobox (C. elegans) ... 69 2e-10
gb|BC008829.1|BC008829 Homo sapiens, Similar to short statu... 69 2e-10
emb|AJ001116.1|MMUNCX41 Mus musculus mRNA for Uncx4.1 protein 69 2e-10
ref|XM_095347.1| Homo sapiens similar to Unc4.1 homeobox (C... 69 2e-10
emb|AJ002368.1|HSSHOTB Homo sapiens mRNA for homeobox prote... 69 2e-10
emb|Y11536.1|HSSHOXA H.sapiens mRNA for SHOXa protein 69 2e-10
emb|Z96107.1|MMZ96107 Mus musculus mRNA for Uncx4.1 69 2e-10
gb|AF022654.1|AF022654 Homo sapiens homeodomain protein (OG... 69 2e-10
emb|AJ002260.1|RN2260 Rattus Norvegicus mRNA for Prx3B protein 69 2e-10
emb|Y11535.1|HSSHOXB H.sapiens mRNA for SHOXb protein 69 2e-10
ref|NM_011021.1| Mus musculus orthopedia homolog, (Drosophi... 69 2e-10
emb|Y10413.1|MMORTHOPE M.musculus mRNA for OTP protein 69 2e-10
ref|NM_131100.1| Danio rerio orthopedia protein (otp), mRNA 69 2e-10
gb|AF071496.2|AF071496 Danio rerio orthopedia protein (Otp)... 69 2e-10
dbj|AK018615.1|AK018615 Mus musculus adult male cecum cDNA,... 69 2e-10
dbj|AB034246.1|AB034246 Danio rerio mRNA for Mtx2, complete... 69 2e-10
ref|NM_032109.1| Homo sapiens orthopedia homolog (Drosophil... 69 2e-10
gb|BC001800.1|BC001800 Homo sapiens, orthopedia homolog, (D... 69 2e-10
ref|NM_008936.1| Mus musculus paired like homeodomain facto... 69 3e-10
gb|U77946.1|MMU77946 Mus musculus pituitary specific homeod... 69 3e-10
gb|AF241310.1|AF241310 Acropora millepora transcription fac... 69 3e-10
gb|AF005999.1|AF005999 Xenopus laevis homeobox protein (mil... 69 3e-10
emb|Y10299.1|DTPRD1 D.tigrina mRNA for DNA-binding protein 69 3e-10
emb|AJ007501.1|PLI7501 Paracentrotus lividus mRNA for ortho... 69 3e-10
ref|NM_005029.1| Homo sapiens paired-like homeodomain trans... 68 4e-10
gb|AF041339.1|AF041339 Homo sapiens homeodomain protein (PI... 68 4e-10
ref|XM_038589.1| Homo sapiens similar to Homeobox domain co... 68 4e-10
gb|AF232676.1|AF232676 Sus scrofa prophet of pit-1 (Prop-1)... 68 4e-10
dbj|AK025181.1|AK025181 Homo sapiens cDNA: FLJ21528 fis, cl... 68 4e-10
gb|BC011642.1|BC011642 Homo sapiens, Similar to paired-like... 68 4e-10
ref|NM_057678.1| Drosophila melanogaster reversed polarity ... 68 5e-10
emb|X78218.1|DMREPO D.melanogaster mRNA for reversed polarity 68 5e-10
gb|S78747.1|S78747 rk2=glial-specific homeodomain protein [... 68 5e-10
ref|XM_080599.1| homeobrain, mRNA 68 5e-10
ref|NM_008852.1| Mus musculus paired-like homeodomain trans... 68 5e-10
gb|AF005772.1|AF005772 Mus musculus homeobox protein Pitx3 ... 68 5e-10
ref|NM_080164.1| Drosophila melanogaster homeobrain (hbn), ... 68 5e-10
emb|AJ276705.1|DME276705 Drosophila melanogaster mRNA for h... 68 5e-10
ref|NM_077964.1| Homeobox domain 68 5e-10
gb|AY058293.1| Drosophila melanogaster GH05443 full length ... 68 5e-10
gb|AF079560.1|AF079560 Xenopus laevis homeobox protein BIX2... 67 7e-10
ref|NM_019247.1| Rattus norvegicus paired-like homeodomain ... 67 7e-10
emb|AJ011005.2|RNO011005 Rattus norvegicus mRNA for Ptx3 pr... 67 7e-10
ref|NM_063737.1| homeobox protein (otd subfamily) 67 9e-10
ref|NM_006261.1| Homo sapiens prophet of Pit1, paired-like ... 67 9e-10
gb|AF281674.1| Branchiostoma floridae homeodomain protein g... 67 9e-10
dbj|AB034245.1|AB034245 Danio rerio mtx1 mRNA, complete cds 67 9e-10
emb|X64904.1|CEUNC4A C.elegans unc-4 mRNA, partial cds 67 9e-10
gb|AF076215.1|AF076215 Homo sapiens prophet of Pit1 (PROP1)... 67 9e-10
emb|AJ278330.1|XLA278330 Xenopus laevis mRNA for Pitx1 prot... 67 1e-09
gb|AF217647.1|AF217647 Xenopus laevis pituitary homeobox ge... 67 1e-09
gb|AF315231.1|AF315231 Strongylocentrotus purpuratus goosec... 67 1e-09
gb|AF295531.1|AF295531 Hydra vulgaris aristaless-like prote... 67 1e-09
gb|AF155206.1|AF155206 Xenopus laevis homeodomain transcrip... 67 1e-09
ref|NG_000413.1| Drosophila melanogaster reversed polarity ... 66 2e-09
gb|AF079559.1|AF079559 Xenopus laevis homeobox protein BIX1... 66 2e-09
gb|AC009462.6| Drosophila melanogaster, chromosome 3R, regi... 66 2e-09
gb|AC009394.4|AC009394 Drosophila melanogaster, chromosome ... 66 2e-09
gb|AE003721.1|AE003721 Drosophila melanogaster genomic scaf... 66 2e-09
gb|AF081351.1|AF081351 Xenopus laevis homeodomain protein M... 66 2e-09
ref|NM_078665.1| Drosophila melanogaster Ods-site homeobox ... 66 2e-09
gb|AF095575.1|AF095575 Drosophila melanogaster paired-type ... 66 2e-09
ref|NM_011097.1| Mus musculus paired-like homeodomain trans... 66 2e-09
gb|BC012696.1|BC012696 Mus musculus, Similar to paired-like... 66 2e-09
gb|U71206.1|MMU71206 Mus musculus Ptx1 mRNA, complete cds 66 2e-09
ref|NM_002653.1| Homo sapiens paired-like homeodomain trans... 66 2e-09
gb|U65434.1|PWU65434 Pleurodeles waltl homeodomain-containi... 66 2e-09
gb|U54499.1|MMU54499 Mus musculus homeodomain protein POTX ... 66 2e-09
gb|BC009412.1|BC009412 Homo sapiens, paired-like homeodomai... 66 2e-09
ref|NM_057601.1| Drosophila melanogaster Goosecoid (Gsc), t... 66 2e-09
gb|U70370.1|HSU70370 Human hindlimb expressed homeobox prot... 66 2e-09
ref|NM_053624.1| Rattus norvegicus paired-like homeodomain ... 66 2e-09
gb|U52968.1|DMU52968 Drosophila melanogaster goosecoid (D-g... 66 2e-09
dbj|AB047298.1|AB047298 Rattus norvegicus mRNA for Ptx1 hom... 66 2e-09
ref|NM_131349.1| Danio rerio homeo box (expressed in ES cel... 66 2e-09
gb|U65433.1|DRU65433 Danio rerio homeodomain-containing pro... 66 2e-09
emb|X95420.1|DMGSC D.melanogaster mRNA for goosecoid homoeb... 66 2e-09
ref|XM_047747.3| Homo sapiens paired-like homeodomain trans... 66 2e-09
emb|AJ289023.1|PDU289023 Platynereis dumerilii mRNA for hom... 66 2e-09
gb|BC003685.1|BC003685 Homo sapiens, paired-like homeodomai... 66 2e-09
gb|AF069397.1|AF069397 Gallus gallus paired-like homeodomai... 66 2e-09
gb|AF048722.1|AF048722 Homo sapiens ALL1 responsive protein... 65 3e-09
gb|AF265671.1|AF265671 Xenopus laevis paired-like homeodoma... 65 3e-09
gb|AF201091.1|AF201091 Mus musculus paired-like homeodomain... 65 3e-09
gb|AF156906.1|AF156906 Danio rerio transcription factor Pit... 65 3e-09
gb|AF156905.1|AF156905 Danio rerio transcription factor Pit... 65 3e-09
gb|M81481.1|XELGSCHB Xenopus laevis goosecoid homeobox prot... 65 3e-09
ref|NM_011098.1| Mus musculus paired-like homeodomain trans... 65 3e-09
gb|AF048724.1|AF048724 Mus musculus ALL1 responsive protein... 65 3e-09
emb|AJ222971.1|RNPTX2A Rattus norvegicus mRNA for homeodoma... 65 3e-09
gb|AF048723.1|AF048723 Mus musculus ALL1 responsive protein... 65 3e-09
emb|AJ005787.1|XLAJ5787 Xenopus laevis mRNA for XPtx2b home... 65 3e-09
gb|U80010.1|MMU80010 Mus musculus pituitary homeobox 2 isof... 65 3e-09
gb|BC013998.1|BC013998 Homo sapiens, clone MGC:20144 IMAGE:... 65 3e-09
dbj|AB050722.1| Paralichthys olivaceus pitx2 mRNA, complete... 65 3e-09
ref|NM_130975.1| Danio rerio paired-like homeodomain transc... 65 3e-09
gb|AF132446.1|AF132446 Danio rerio transcription factor Pit... 65 3e-09
ref|NM_019334.1| Rattus norvegicus paired-like homeodomain ... 65 3e-09
emb|AJ222972.1|RNPTX2B Rattus norvegicus mRNA for homeodoma... 65 3e-09
gb|U80036.1|MMU80036 Mus musculus orthodenticle-like homeob... 65 3e-09
ref|NM_131017.1| Danio rerio goosecoid (gsc), mRNA 65 3e-09
ref|NM_000325.1| Homo sapiens paired-like homeodomain trans... 65 3e-09
gb|AF048721.1|AF048721 Homo sapiens ALL1 responsive protein... 65 3e-09
gb|U69961.1|HSU69961 Homo sapiens solurshin (RGS) mRNA, com... 65 3e-09
gb|L03395.1|ZEFHDPB Brachydanio rerio goosecoid homeodomain... 65 3e-09
ref|NM_010351.1| Mus musculus goosecoid (Gsc), mRNA 65 3e-09
emb|Y13150.1|MMGOOSEE Mus musculus mRNA for goosecoid homeo... 65 3e-09
emb|Y13149.1|MMGOOSED Mus musculus mRNA for goosecoid homeo... 65 3e-09
emb|X99239.1|MMGSC M.muscsulus mRNA for goosecoid homeobox 65 3e-09
dbj|AB001938.1|AB001938 Cynops pyrrhogaster goosecoid mRNA,... 65 3e-09
gb|U70132.1|MMU70132 Mus musculus bicoid-related homeodomai... 65 3e-09
gb|AF077767.1|AF077767 Xenopus laevis homeodomain transcrip... 65 3e-09
gb|AF132447.1|AF132447 Danio rerio transcription factor Pit... 65 3e-09
gb|L03394.1|ZEFGHPA Brachydanio rerio goosecoid homeodomain... 65 3e-09
gb|AF181681.2|AF181681 Danio rerio transcription factor Pit... 65 3e-09
emb|X70471.1|GDGOOSEC G.domesticus chicken goosecoid gene 65 3e-09
gb|AF039832.1|AF039832 Rattus norvegicus homeobox protein (... 65 3e-09
ref|XM_085071.1| Homo sapiens similar to HOMEOBOX PROTEIN G... 65 3e-09
ref|XM_045596.3| Homo sapiens paired-like homeodomain trans... 65 3e-09
gb|M63872.1|XELHOMBXA X.laevis organizer specific homeobox ... 65 3e-09
dbj|AB006321.1|AB006321 Mus musculus mRNA for Brx1b homeopr... 65 3e-09
gb|U80011.1|MMU80011 Mus musculus pituitary homeobox 2 isof... 65 3e-09
gb|AF297713.1|AF297713 Xenopus laevis homeodomain transcrip... 65 3e-09
gb|AF076640.1|AF076640 Gallus gallus transcription factor P... 65 3e-09
gb|AF048720.1|AF048720 Homo sapiens ALL1 responsive protein... 65 3e-09
emb|Y17718.1|SSY17718 Sus scrofa mRNA for goosecoid protein... 65 3e-09
gb|AF077092.1|AF077092 Gallus gallus pituitary homeobox pro... 65 3e-09
dbj|AB006320.1|AB006320 Mus musculus Brx1a mRNA for homeopr... 65 3e-09
ref|NM_133014.1| Drosophila melanogaster (unc-4), mRNA 65 3e-09
ref|XM_082782.1| unc-4, mRNA 65 3e-09
gb|AF086820.1|AF086820 Drosophila melanogaster paired-like ... 65 3e-09
gb|AF079562.1|AF079562 Xenopus laevis homeobox protein BIX4... 65 3e-09
emb|AJ005786.1|XLAJ5786 Xenopus laevis mRNA for XPtx2a home... 65 3e-09
gb|AE003589.2|AE003589 Drosophila melanogaster genomic scaf... 65 3e-09
gb|AC008002.3|AC008002 Drosophila melanogaster, chromosome ... 65 3e-09
gb|AC004573.1|AC004573 Drosophila melanogaster, chromosome ... 65 3e-09
ref|NG_000669.1| Drosophila melanogaster PvuII-PstI homolog... 65 3e-09
gb|AF443277.1|AF443277 Strongylocentrotus purpuratus paired... 65 4e-09
emb|AL137797.9|AL137797 Human DNA sequence from clone RP5-1... 64 6e-09
emb|X60099.1|XLXANF1 X.laevis XANF-1 mRNA 64 6e-09
emb|AJ010498.1|GTI010498 Girardia tigrina mRNA for DtPax-6 ... 64 8e-09
gb|AF418642.1|AF418642 Astyanax mexicanus retinal homeobox ... 64 8e-09
gb|U28370.1|XLU28370 Xenopus laevis homeobox protein (XANF-... 64 8e-09
emb|AJ311310.1|DJA311310 Dugesia japonica partial mRNA for ... 64 8e-09
emb|X66820.1|EGHBX4 E.granulosus EgHbx4 homeobox gene 64 1e-08
emb|AJ249563.1|PCA249563 Podocoryne carnea mRNA for paired ... 64 1e-08
emb|Y09850.1|GGGSC2 G.gallus GSC2 gene 64 1e-08
gb|U82811.1|HSU82811 Human homeodomain-containing protein (... 64 1e-08
ref|NM_003865.1| Homo sapiens homeo box (expressed in ES ce... 64 1e-08
>gb|U34615.1|GGU34615 Gallus gallus homeobox protein CMIX mRNA, complete cds
Length = 886
Score = 203 bits (516), Expect = 8e-51
Identities = 117/210 (55%), Positives = 117/210 (55%)
Frame = +2
Query: 1 MAALRFGXXXXXXXXXXXXXXXGRWLCGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRR 60
MAALRFG GRWLCGT QRR
Sbjct: 2 MAALRFGPPPAELPAVPPSCPPGRWLCGTAGGSGGGPGAAPAPLASLPPAAEGAPSAQRR 181
Query: 61 KRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAKXXXXXXXX 120
KRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK
Sbjct: 182 KRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAKSRRQRGPP 361
Query: 121 XXXXXXXXXXXXXXXXCGAAPLLRAREEHREWPPRAAGPPGSALRXXXXXXXXXXXXXXX 180
CGAAPLLRAREEHREWPPRAAGPPGSALR
Sbjct: 362 RPGAPAPPPPPPQRSPCGAAPLLRAREEHREWPPRAAGPPGSALRPHGGSGGAPAGPYPP 541
Query: 181 XXXXXXXXXXXFSELGTEWEENAIGAFRAL 210
FSELGTEWEENAIGAFRAL
Sbjct: 542 RPAFPLPAGGGFSELGTEWEENAIGAFRAL 631
>emb|AJ004903.1|GGJ004903 Gallus gallus mRNA for CMIX homeobox gene, partial cds
Length = 409
Score = 112 bits (279), Expect = 2e-23
Identities = 55/55 (100%), Positives = 55/55 (100%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK
Sbjct: 9 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 173
Score = 42.7 bits (99), Expect = 0.018
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 192 FSELGTEWEENAIGAFRAL 210
FSELGTEWEENAIGAFRAL
Sbjct: 190 FSELGTEWEENAIGAFRAL 246
>gb|AF154573.1|AF154573 Mus musculus homeobox protein MIX (MIx) mRNA, complete cds
Length = 2295
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/55 (78%), Positives = 49/55 (88%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRRKRTSF++ QL+ LELVF+ TMYPDI+LRERLA T +PESRIQVWFQNRRAK
Sbjct: 278 QRRKRTSFSSEQLQLLELVFRQTMYPDIHLRERLAALTLLPESRIQVWFQNRRAK 442
>gb|AF201959.1|AF201959 Mus musculus Mix-related homeobox protein mRNA, partial cds
Length = 1945
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/55 (78%), Positives = 49/55 (88%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRRKRTSF++ QL+ LELVF+ TMYPDI+LRERLA T +PESRIQVWFQNRRAK
Sbjct: 221 QRRKRTSFSSEQLQLLELVFRQTMYPDIHLRERLAALTLLPESRIQVWFQNRRAK 385
>ref|NM_013729.1| Mus musculus Mix1 homeobox-like 1 (Xenopus laevis) (Mixl1), mRNA
Length = 696
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/55 (78%), Positives = 49/55 (88%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRRKRTSF++ QL+ LELVF+ TMYPDI+LRERLA T +PESRIQVWFQNRRAK
Sbjct: 256 QRRKRTSFSSEQLQLLELVFRQTMYPDIHLRERLAALTLLPESRIQVWFQNRRAK 420
>gb|AF135063.1|AF135063 Mus musculus Mix-like homeobox protein (Mml) mRNA, complete cds
Length = 696
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/55 (78%), Positives = 49/55 (88%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRRKRTSF++ QL+ LELVF+ TMYPDI+LRERLA T +PESRIQVWFQNRRAK
Sbjct: 256 QRRKRTSFSSEQLQLLELVFRQTMYPDIHLRERLAALTLLPESRIQVWFQNRRAK 420
>ref|NM_031944.1| Homo sapiens Mix-like homeobox protein 1 (MILD1), mRNA
Length = 699
Score = 87.8 bits (216), Expect = 5e-16
Identities = 43/55 (78%), Positives = 48/55 (87%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRRKRTSF+A QL+ LELVF+ T YPDI+LRERLA T +PESRIQVWFQNRRAK
Sbjct: 256 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAK 420
>gb|AF211891.1|AF211891 Homo sapiens Mix.1 homeobox-like protein (MIXL) mRNA, complete cds
Length = 699
Score = 87.8 bits (216), Expect = 5e-16
Identities = 43/55 (78%), Positives = 48/55 (87%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRRKRTSF+A QL+ LELVF+ T YPDI+LRERLA T +PESRIQVWFQNRRAK
Sbjct: 256 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAK 420
>ref|XM_037300.5| Homo sapiens Mix-like homeobox protein 1 (MILD1), mRNA
Length = 693
Score = 87.8 bits (216), Expect = 5e-16
Identities = 43/55 (78%), Positives = 48/55 (87%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRRKRTSF+A QL+ LELVF+ T YPDI+LRERLA T +PESRIQVWFQNRRAK
Sbjct: 250 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAK 414
>ref|NM_130940.1| Danio rerio mixer (mix), mRNA
Length = 1494
Score = 81.3 bits (199), Expect = 5e-14
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = +2
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
RRKRT+FT Q++ LE V+ DT YPDIYLRE+L T +PESRIQVWFQNRRAK
Sbjct: 314 RRKRTNFTQQQIDVLEKVYLDTKYPDIYLREKLEALTGLPESRIQVWFQNRRAK 475
>gb|AF121771.1|AF121771 Danio rerio homeodomain transcription factor Mixer (mix) mRNA,
complete cds
Length = 1494
Score = 81.3 bits (199), Expect = 5e-14
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = +2
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
RRKRT+FT Q++ LE V+ DT YPDIYLRE+L T +PESRIQVWFQNRRAK
Sbjct: 314 RRKRTNFTQQQIDVLEKVYLDTKYPDIYLREKLEALTGLPESRIQVWFQNRRAK 475
>ref|XM_060436.2| Homo sapiens similar to dJ1109J22.1 (novel homeobox domain protein)
(LOC127343), mRNA
Length = 1134
Score = 80.9 bits (198), Expect = 6e-14
Identities = 37/55 (67%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE FQ T YPD+ +RERLA T +PE+R+QVWF+NRRAK
Sbjct: 196 QRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK 360
>gb|AF461039.1|AF461039 Mus musculus paired-type homeobox Atx mRNA, partial cds
Length = 850
Score = 80.9 bits (198), Expect = 6e-14
Identities = 37/55 (67%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE FQ T YPD+ +RERLA T +PE+R+QVWF+NRRAK
Sbjct: 214 QRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK 378
>ref|NM_130865.1| Mus musculus diencephalon/mesencephalon-expressed brain homeobox 1
(Dmbx1), mRNA
Length = 1146
Score = 80.9 bits (198), Expect = 6e-14
Identities = 37/55 (67%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE FQ T YPD+ +RERLA T +PE+R+QVWF+NRRAK
Sbjct: 211 QRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK 375
>gb|AF463513.1|AF463513 Mus musculus cerebellar-diencephalic-mesencephalic homeobox protein
(Cdmx) mRNA, complete cds
Length = 1146
Score = 80.9 bits (198), Expect = 6e-14
Identities = 37/55 (67%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE FQ T YPD+ +RERLA T +PE+R+QVWF+NRRAK
Sbjct: 211 QRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK 375
>gb|AF421857.1| Mus musculus paired-like homeobox protein DMBX1 (Dmbx1) mRNA,
complete cds; alternatively spliced
Length = 1146
Score = 80.9 bits (198), Expect = 6e-14
Identities = 37/55 (67%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE FQ T YPD+ +RERLA T +PE+R+QVWF+NRRAK
Sbjct: 211 QRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK 375
>gb|AF421858.1| Mus musculus paired-like homeobox protein DMBX1 (Dmbx1) mRNA,
complete cds; alternatively spliced
Length = 1131
Score = 80.9 bits (198), Expect = 6e-14
Identities = 37/55 (67%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE FQ T YPD+ +RERLA T +PE+R+QVWF+NRRAK
Sbjct: 196 QRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK 360
>gb|AF461038.1|AF461038 Gallus gallus paired-type homeobox Atx mRNA, partial cds
Length = 908
Score = 80.9 bits (198), Expect = 6e-14
Identities = 37/55 (67%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE FQ T YPD+ +RERLA T +PE+R+QVWF+NRRAK
Sbjct: 199 QRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAK 363
>gb|U50745.1|XLU50745 Xenopus laevis homeobox protein Mix.2 mRNA, complete cds
Length = 1110
Score = 79.0 bits (193), Expect = 2e-13
Identities = 40/55 (72%), Positives = 42/55 (75%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRRKRT FT AQL+ LE FQ MYPDI+ RE LA IPESRIQVWFQNRRAK
Sbjct: 280 QRRKRTFFTQAQLDILEQFFQTNMYPDIHHREELARHIYIPESRIQVWFQNRRAK 444
>gb|M27063.1|XELMIX1HB Xenopus laevis homeobox protein (Mix.1) mRNA, complete cds
Length = 1653
Score = 79.0 bits (193), Expect = 2e-13
Identities = 40/55 (72%), Positives = 42/55 (75%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRRKRT FT AQL+ LE FQ MYPDI+ RE LA IPESRIQVWFQNRRAK
Sbjct: 354 QRRKRTFFTQAQLDILEQFFQTNMYPDIHHREELARHIYIPESRIQVWFQNRRAK 518
>gb|BC010923.1|BC010923 Homo sapiens, Similar to cartilage paired-class homeoprotein 1,
clone MGC:13497 IMAGE:4278460, mRNA, complete cds
Length = 1326
Score = 78.6 bits (192), Expect = 3e-13
Identities = 36/55 (65%), Positives = 46/55 (83%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+FT+ QLE LE VFQ T YPD+Y+RE+LA T++ E+R+QVWFQNRRAK
Sbjct: 404 KRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAK 568
>ref|NM_006982.1| Homo sapiens cartilage paired-class homeoprotein 1 (CART1), mRNA
Length = 1442
Score = 78.6 bits (192), Expect = 3e-13
Identities = 36/55 (65%), Positives = 46/55 (83%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+FT+ QLE LE VFQ T YPD+Y+RE+LA T++ E+R+QVWFQNRRAK
Sbjct: 549 KRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAK 713
>gb|U31986.1|HSU31986 Human cartilage-specific homeodomain protein Cart-1 mRNA, complete
cds
Length = 1442
Score = 78.6 bits (192), Expect = 3e-13
Identities = 36/55 (65%), Positives = 46/55 (83%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+FT+ QLE LE VFQ T YPD+Y+RE+LA T++ E+R+QVWFQNRRAK
Sbjct: 549 KRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAK 713
>ref|NM_012921.1| Rattus norvegicus Cartilage homeo protein 1 (Cart1), mRNA
Length = 1760
Score = 78.6 bits (192), Expect = 3e-13
Identities = 36/55 (65%), Positives = 46/55 (83%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+FT+ QLE LE VFQ T YPD+Y+RE+LA T++ E+R+QVWFQNRRAK
Sbjct: 854 KRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAK 1018
>gb|L14018.1|RATCART1X Rat cartilage homeoprotein 1 (Cart-1) mRNA, complete cds
Length = 1760
Score = 78.6 bits (192), Expect = 3e-13
Identities = 36/55 (65%), Positives = 46/55 (83%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+FT+ QLE LE VFQ T YPD+Y+RE+LA T++ E+R+QVWFQNRRAK
Sbjct: 854 KRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAK 1018
>gb|U15276.1|XLU15276 Xenopus laevis cartilage homeoprotein 1 precursor (Xcart1) mRNA,
complete cds
Length = 1274
Score = 78.6 bits (192), Expect = 3e-13
Identities = 36/55 (65%), Positives = 46/55 (83%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+FT+ QLE LE VFQ T YPD+Y+RE+LA T++ E+R+QVWFQNRRAK
Sbjct: 518 KRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAK 682
>emb|AJ278856.1|PDU78856 Platynereis dumerilii mRNA for Otx homeobox transcription factor
Length = 701
Score = 77.8 bits (190), Expect = 5e-13
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +FQ T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 289 QRRERTTFTRAQLDVLESLFQKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 453
>ref|NM_007442.1| Mus musculus aristaless 4 (Alx4), mRNA
Length = 1770
Score = 77.4 bits (189), Expect = 7e-13
Identities = 36/55 (65%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+FT+ QLE LE VFQ T YPD+Y RE+LA T + E+R+QVWFQNRRAK
Sbjct: 799 KRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAK 963
>gb|AF001465.1|MMAF001465 Mus musculus paired-type homeodomain transcription factor (Alx4)
mRNA, complete cds
Length = 1770
Score = 77.4 bits (189), Expect = 7e-13
Identities = 36/55 (65%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+FT+ QLE LE VFQ T YPD+Y RE+LA T + E+R+QVWFQNRRAK
Sbjct: 799 KRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAK 963
>emb|AJ404888.1|HSA404888 Homo sapiens mRNA for homeodomain transcription factor ALX4
Length = 1493
Score = 77.4 bits (189), Expect = 7e-13
Identities = 36/55 (65%), Positives = 44/55 (79%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+FT+ QLE LE VFQ T YPD+Y RE+LA T + E+R+QVWFQNRRAK
Sbjct: 692 KRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAK 856
>gb|AF092538.1|AF092538 Gallus gallus paired type homeodomain protein (Alx-4) mRNA,
complete cds
Length = 1164
Score = 77.4 bits (189), Expect = 7e-13
Identities = 36/55 (65%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+FT+ QLE LE VFQ T YPD+Y RE+LA T + E+R+QVWFQNRRAK
Sbjct: 574 KRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAK 738
>gb|AF294629.1|AF294629 Homo sapiens aristaless-like 4 (ALX4) mRNA, complete cds
Length = 1583
Score = 77.4 bits (189), Expect = 7e-13
Identities = 36/55 (65%), Positives = 44/55 (79%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+FT+ QLE LE VFQ T YPD+Y RE+LA T + E+R+QVWFQNRRAK
Sbjct: 744 KRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAK 908
>ref|XM_030752.1| Homo sapiens aristaless-like homeobox 4 (ALX4), mRNA
Length = 1581
Score = 77.4 bits (189), Expect = 7e-13
Identities = 36/55 (65%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+FT+ QLE LE VFQ T YPD+Y RE+LA T + E+R+QVWFQNRRAK
Sbjct: 742 KRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAK 906
>ref|NM_021926.1| Homo sapiens aristaless-like homeobox 4 (ALX4), mRNA
Length = 1583
Score = 77.4 bits (189), Expect = 7e-13
Identities = 36/55 (65%), Positives = 44/55 (79%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+FT+ QLE LE VFQ T YPD+Y RE+LA T + E+R+QVWFQNRRAK
Sbjct: 744 KRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAK 908
>dbj|AB058691.1|AB058691 Homo sapiens mRNA for KIAA1788 protein, partial cds
Length = 5654
Score = 77.4 bits (189), Expect = 7e-13
Identities = 36/55 (65%), Positives = 44/55 (79%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+FT+ QLE LE VFQ T YPD+Y RE+LA T + E+R+QVWFQNRRAK
Sbjct: 647 KRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAK 811
>gb|AY040861.1| Scyliorhinus canicula homeobox protein Otx5 (Otx5) mRNA, complete
cds
Length = 873
Score = 77.0 bits (188), Expect = 9e-13
Identities = 41/105 (39%), Positives = 53/105 (50%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAKXXXXX 117
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 112 QRRERTTFTRAQLDILESLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 291
Query: 118 XXXXXXXXXXXXXXXXXXXCGAAPLLRAREEHREWPPRAAGPPGS 162
+ + PP AAG P S
Sbjct: 292 QQSSGQAKARPTKKKTSPTRDTSSETNGNGHYSPTPPGAAGTPSS 426
>dbj|AB012299.1|AB012299 Lampetra japonica mRNA for LjOtxA, complete cds
Length = 2221
Score = 76.3 bits (186), Expect = 1e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 576 QRRERTTFTRAQLDVLEALFSKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 740
>gb|AY040535.1| Schistocerca americana pairberry 1 transcription factor (pby1)
mRNA, partial cds
Length = 2101
Score = 76.3 bits (186), Expect = 1e-12
Identities = 34/55 (61%), Positives = 42/55 (75%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+F+ QLETLE FQ T YPD+Y RE LA T++ E+R+QVWF NRRA+
Sbjct: 407 QRRSRTTFSGDQLETLERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRAR 571
>gb|AY036005.1| Danio rerio orthodenticle-related homeobox 5 mRNA, complete cds
Length = 1411
Score = 76.3 bits (186), Expect = 1e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 331 QRRERTTFTRAQLDVLEALFSKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 495
>dbj|AB011526.1|AB011526 Hemicentrotus pulcherrimus early type Otx (HpOtxE) mRNA, complete
cds
Length = 3260
Score = 76.3 bits (186), Expect = 1e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 569 QRRERTTFTRAQLDVLETLFSRTRYPDIFMREEVAMKINLPESRVQVWFKNRRAK 733
>gb|U59830.1|LOU59830 Loligo opalescens Pax-6 mRNA, complete cds
Length = 1980
Score = 76.3 bits (186), Expect = 1e-12
Identities = 35/54 (64%), Positives = 42/54 (76%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFTAAQ+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 735 QRNRTSFTAAQIEALEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNRRAK 896
>dbj|AB061768.1|AB061768 Hemicentrotus pulcherrimus HpOtxL mRNA for late type
orthodenticle-related protein, complete cds
Length = 3478
Score = 76.3 bits (186), Expect = 1e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 781 QRRERTTFTRAQLDVLETLFSRTRYPDIFMREEVAMKINLPESRVQVWFKNRRAK 945
>gb|S76899.1|S76899 SpOtx=orthodenticle-related protein [Strongylocentrotus purpuratus,
mRNA, 3198 nt]
Length = 3198
Score = 76.3 bits (186), Expect = 1e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 540 QRRERTTFTRAQLDVLETLFSRTRYPDIFMREEVAMKINLPESRVQVWFKNRRAK 704
>ref|NM_021728.1| Homo sapiens orthodenticle homolog 2 (Drosophila) (OTX2), mRNA
Length = 894
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 136 QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 300
>gb|AF154123.1|AF154123 Bos taurus cone-rod homeobox mRNA, complete cds
Length = 989
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 43/55 (77%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QLE LE +F T YPD+Y RE +A +PESR+QVWF+NRRAK
Sbjct: 197 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAK 361
>dbj|AB028220.1|AB028220 Ptychodera flava mRNA for Pf-Otx, complete cds
Length = 3625
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 577 QRRERTTFTRAQLDVLESLFSKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 741
>ref|NM_002584.1| Homo sapiens paired box gene 7 (PAX7), transcript variant 1, mRNA
Length = 2272
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/55 (63%), Positives = 42/55 (75%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA T++ E+R+QVWF NRRA+
Sbjct: 1248 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR 1412
>emb|X96743.1|HSPAX7M H.sapiens mRNA for paired box containing transcription factor, PAX7
Length = 2272
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/55 (63%), Positives = 42/55 (75%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA T++ E+R+QVWF NRRA+
Sbjct: 1248 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR 1412
>gb|AF254422.2|AF254422 Mus musculus paired box transcription factor PAX7 (Pax7) mRNA,
partial cds
Length = 4244
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/55 (63%), Positives = 42/55 (75%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA T++ E+R+QVWF NRRA+
Sbjct: 613 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR 777
>emb|X68884.1|MMOTX2 M.musculus Otx2 mRNA
Length = 204
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 22 QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 186
>gb|BC016664.1|BC016664 Homo sapiens, cone-rod homeobox, clone MGC:9387 IMAGE:3869862,
mRNA, complete cds
Length = 2376
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 43/55 (77%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QLE LE +F T YPD+Y RE +A +PESR+QVWF+NRRAK
Sbjct: 254 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAK 418
>ref|NM_131251.1| Danio rerio orthodenticle homolog 2 (otx2), mRNA
Length = 2161
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 375 QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 539
>gb|AE003466.1|AE003466 Drosophila melanogaster genomic scaffold 142000013386038 section 15 of
15, complete sequence
Length = 283099
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/55 (63%), Positives = 40/55 (72%)
Frame = -1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F T YPD+Y RE LA T + E+RIQVWF NRRA+
Sbjct: 22315 QRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRAR 22151
Score = 70.1 bits (170), Expect = 1e-10
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+F+ Q++ LE +F T YPD+Y RE LA +T + E+R+QVWF NRRA+
Sbjct: 44180 QRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRAR 44344
>gb|U14592.1|DRU14592 Danio rerio orthodenticle-related protein 1 (zOtx2) mRNA, complete
cds
Length = 2161
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 375 QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 539
>dbj|D26173.1|ZEFOTX2 Zebrafish otx2 mRNA for otx homeoprotein, complete cds
Length = 948
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 190 QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 354
>ref|NM_021855.1| Rattus norvegicus cone-rod homeobox protein (Crx), mRNA
Length = 900
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QLE LE +F T YPD+Y RE +A +PESR+QVWF+NRRAK
Sbjct: 115 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAK 279
>ref|NM_000554.1| Homo sapiens cone-rod homeobox (CRX), mRNA
Length = 900
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QLE LE +F T YPD+Y RE +A +PESR+QVWF+NRRAK
Sbjct: 115 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAK 279
>gb|AF135838.1|AF135838 Rattus norvegicus homeodomain protein CRX (Crx) mRNA, complete cds
Length = 900
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QLE LE +F T YPD+Y RE +A +PESR+QVWF+NRRAK
Sbjct: 115 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAK 279
>gb|AF014370.1|AF014370 Danio rerio transcription factor PAX7E (pax7) mRNA, complete cds
Length = 2403
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/55 (63%), Positives = 42/55 (75%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA T++ E+R+QVWF NRRA+
Sbjct: 995 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR 1159
>dbj|AB021129.1|AB021129 Rattus norvegicus Crx mRNA for cone-rod homeobox protein, complete
cds
Length = 900
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QLE LE +F T YPD+Y RE +A +PESR+QVWF+NRRAK
Sbjct: 115 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAK 279
>ref|NM_014588.2| Homo sapiens visual system homeobox 1 homolog, CHX10-like
(zebrafish) (VSX1), mRNA
Length = 1433
Score = 75.9 bits (185), Expect = 2e-12
Identities = 36/55 (65%), Positives = 41/55 (74%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FTA QLE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 763 KRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAK 927
>gb|AF176797.2|AF176797 Homo sapiens transcription factor VSX1 (VSX1) mRNA, complete cds
Length = 1433
Score = 75.9 bits (185), Expect = 2e-12
Identities = 36/55 (65%), Positives = 41/55 (74%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FTA QLE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 763 KRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAK 927
>emb|Z35141.1|HSPAX7GE H.sapiens Pax-7 gene for transcription factor
Length = 1503
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/55 (63%), Positives = 42/55 (75%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA T++ E+R+QVWF NRRA+
Sbjct: 751 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR 915
>emb|AJ000939.1|OLJ000939 Oryzias latipes, Otx2 gene
Length = 543
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 112 QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 276
>gb|AF251033.1|AF251033 Homo sapiens homeodomain protein RINX, isoform L1 (VSX1) mRNA,
complete cds, alternatively spliced
Length = 1956
Score = 75.9 bits (185), Expect = 2e-12
Identities = 36/55 (65%), Positives = 41/55 (74%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FTA QLE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 525 KRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAK 689
>gb|AF251032.1|AF251032 Bos taurus homeodomain protein RINX (Rinx) mRNA, complete cds
Length = 1957
Score = 75.9 bits (185), Expect = 2e-12
Identities = 36/55 (65%), Positives = 41/55 (74%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FTA QLE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 529 KRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAK 693
>gb|AF129932.1|AF129932 Herdmania curvata homeobox protein Otx mRNA, complete cds
Length = 2395
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 352 QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 516
>gb|AF014369.1|AF014369 Danio rerio transcription factor PAX7D (pax7) mRNA, complete cds
Length = 2317
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/55 (63%), Positives = 42/55 (75%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA T++ E+R+QVWF NRRA+
Sbjct: 995 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR 1159
>gb|AC007582.7| Drosophila melanogaster, chromosome 2R, region 60F-60F, BAC clone
BACR17E16, complete sequence
Length = 180162
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/55 (63%), Positives = 40/55 (72%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F T YPD+Y RE LA T + E+RIQVWF NRRA+
Sbjct: 150784 QRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRAR 150948
Score = 70.1 bits (170), Expect = 1e-10
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = -3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+F+ Q++ LE +F T YPD+Y RE LA +T + E+R+QVWF NRRA+
Sbjct: 128920 QRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRAR 128756
>dbj|D87838.1|D87838 Gallus gallus mRNA for PAX7 protein, complete cds
Length = 2132
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/55 (63%), Positives = 42/55 (75%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA T++ E+R+QVWF NRRA+
Sbjct: 828 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR 992
>gb|BC016502.1|BC016502 Mus musculus, cone-rod homeobox containing gene, clone MGC:25283
IMAGE:4527863, mRNA, complete cds
Length = 2845
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QLE LE +F T YPD+Y RE +A +PESR+QVWF+NRRAK
Sbjct: 202 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAK 366
>gb|BC017609.1|BC017609 Mus musculus, clone MGC:27657 IMAGE:4527414, mRNA, complete cds
Length = 1737
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 444 QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 608
>ref|NM_013945.1| Homo sapiens paired box gene 7 (PAX7), transcript variant 2, mRNA
Length = 2255
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/55 (63%), Positives = 42/55 (75%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA T++ E+R+QVWF NRRA+
Sbjct: 1242 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR 1406
>gb|AF178670.1|AF178670 Gallus gallus homeobox protein Chx10-1 (chx10-1) mRNA, complete cds
Length = 1996
Score = 75.9 bits (185), Expect = 2e-12
Identities = 36/55 (65%), Positives = 41/55 (74%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FTA QLE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 506 KRRHRTVFTAHQLEELEKAFNEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAK 670
>gb|AF024711.1|AF024711 Homo sapiens cone rod homeobox protein (CRX) gene, complete cds
Length = 1445
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 43/55 (77%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QLE LE +F T YPD+Y RE +A +PESR+QVWF+NRRAK
Sbjct: 150 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAK 314
>ref|NM_007770.1| Mus musculus cone-rod homeobox containing gene (Crx), mRNA
Length = 1594
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QLE LE +F T YPD+Y RE +A +PESR+QVWF+NRRAK
Sbjct: 241 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAK 405
>gb|AY071593.1| Drosophila melanogaster RE64348 full length cDNA
Length = 2250
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/55 (63%), Positives = 40/55 (72%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F T YPD+Y RE LA T + E+RIQVWF NRRA+
Sbjct: 864 QRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRAR 1028
>gb|AF099746.1|AF099746 Petromyzon marinus Otx mRNA, complete cds
Length = 2456
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 261 QRRERTTFTRAQLDVLESLFSKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 425
>gb|AF043740.1|AF043740 Branchiostoma floridae amphioxus Otx transcription factor (Otx)
mRNA, complete cds
Length = 2436
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 257 QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 421
>gb|U77615.1|MMU77615 Mus musculus homeodomain protein (crx) mRNA, complete cds
Length = 1594
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/55 (61%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QLE LE +F T YPD+Y RE +A +PESR+QVWF+NRRAK
Sbjct: 241 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAK 405
>gb|AF014368.1|AF014368 Danio rerio transcription factor PAX7C (pax7) mRNA, complete cds
Length = 2225
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/55 (63%), Positives = 42/55 (75%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA T++ E+R+QVWF NRRA+
Sbjct: 995 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR 1159
>gb|AF411465.1|AF411465 Petromyzon marinus transcription factor Pax7 mRNA, complete cds
Length = 2190
Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/55 (63%), Positives = 42/55 (75%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA T++ E+R+QVWF NRRA+
Sbjct: 842 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR 1006
>gb|AF381628.1|AF381628 Caenorhabditis elegans clone yk51g10 homeodomain protein TTX-1
mRNA, partial cds
Length = 1469
Score = 75.5 bits (184), Expect = 3e-12
Identities = 35/55 (63%), Positives = 43/55 (77%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT QLE LE F T YPDI++RE +A Q+PESR+QVWF+NRRAK
Sbjct: 540 QRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAK 704
>ref|NM_054068.1| Mus musculus visual system homeobox 1 homolog (zebrafish) (Vsx1),
mRNA
Length = 2588
Score = 75.5 bits (184), Expect = 3e-12
Identities = 36/55 (65%), Positives = 41/55 (74%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FTA QLE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 553 KRRHRTVFTAHQLEELEKAFGEAHYPDVYAREMLAAKTELPEDRIQVWFQNRRAK 717
>gb|AY056825.1| Mus musculus transcription factor VSX1 (Vsx1) mRNA, complete cds
Length = 2588
Score = 75.5 bits (184), Expect = 3e-12
Identities = 36/55 (65%), Positives = 41/55 (74%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FTA QLE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 553 KRRHRTVFTAHQLEELEKAFGEAHYPDVYAREMLAAKTELPEDRIQVWFQNRRAK 717
>gb|U19813.1|XLXOTX2S1 Xenopus laevis homeobox protein orthodenticle 2 (Xotx2) mRNA,
complete cds
Length = 1264
Score = 75.5 bits (184), Expect = 3e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 324 QRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 488
>gb|AF391758.1|AF391758 Mus musculus homeodomain protein RINX (Rinx) mRNA, complete cds
Length = 2483
Score = 75.5 bits (184), Expect = 3e-12
Identities = 36/55 (65%), Positives = 41/55 (74%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FTA QLE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 533 KRRHRTVFTAHQLEELEKAFGEAHYPDVYAREMLAAKTELPEDRIQVWFQNRRAK 697
>gb|L26509.1|XELORTHOAA Xenopus laevis orthodenticle-A like protein (otxA) mRNA, 5'end
Length = 498
Score = 75.5 bits (184), Expect = 3e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 304 QRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 468
>dbj|AB012300.1|AB012300 Lampetra japonica mRNA for LjOtxB, complete cds
Length = 1628
Score = 75.5 bits (184), Expect = 3e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 453 QRRERTTFTRAQLDILESLFSKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 617
>ref|NM_075472.1| Caenorhabditis elegans
Length = 918
Score = 75.5 bits (184), Expect = 3e-12
Identities = 35/55 (63%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT QLE LE F T YPDI++RE +A Q+PESR+QVWF+NRRAK
Sbjct: 436 QRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAK 600
>emb|Z46972.1|XLOTXNUC X.laevis mRNA for homeobox protein
Length = 867
Score = 75.5 bits (184), Expect = 3e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 112 QRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 276
>ref|NM_075473.1| Caenorhabditis elegans
Length = 1077
Score = 75.5 bits (184), Expect = 3e-12
Identities = 35/55 (63%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT QLE LE F T YPDI++RE +A Q+PESR+QVWF+NRRAK
Sbjct: 595 QRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAK 759
>gb|AF395732.1|AF395732 Mus musculus visual system homeobox 1 (Vsx1) mRNA, complete cds
Length = 1404
Score = 75.5 bits (184), Expect = 3e-12
Identities = 36/55 (65%), Positives = 41/55 (74%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FTA QLE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 640 KRRHRTVFTAHQLEELEKAFGEAHYPDVYAREMLAAKTELPEDRIQVWFQNRRAK 804
>emb|AJ223614.1|TRC223614 Tribolium castaneum mRNA for orthodenticle-2 protein
Length = 1708
Score = 75.5 bits (184), Expect = 3e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 427 QRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 591
>ref|NM_078536.1| Drosophila melanogaster ocelliless (oc), mRNA
Length = 3809
Score = 75.5 bits (184), Expect = 3e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 996 QRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 1160
>emb|X58983.1|DMOTD D.melanogaster otd gene for orthodenticle protein
Length = 3809
Score = 75.5 bits (184), Expect = 3e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 996 QRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 1160
>ref|NM_059845.1| homeobox protein (otd subfamily)
Length = 1041
Score = 75.5 bits (184), Expect = 3e-12
Identities = 35/55 (63%), Positives = 39/55 (70%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT QL LE F T YPD+Y RE LA Q+PE R+QVWFQNRRAK
Sbjct: 388 QRRNRTTFTTFQLHALEAAFDKTHYPDVYARETLAAKVQLPEVRVQVWFQNRRAK 552
>gb|AF381629.1|AF381629 Caenorhabditis elegans homeodomain protein TTX-1 mRNA, partial cds
Length = 751
Score = 75.5 bits (184), Expect = 3e-12
Identities = 35/55 (63%), Positives = 43/55 (77%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT QLE LE F T YPDI++RE +A Q+PESR+QVWF+NRRAK
Sbjct: 567 QRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAK 731
>gb|AF381627.1|AF381627 Caenorhabditis elegans clone yk345e3 homeodomain protein TTX-1
mRNA, partial cds
Length = 1340
Score = 75.5 bits (184), Expect = 3e-12
Identities = 35/55 (63%), Positives = 43/55 (77%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT QLE LE F T YPDI++RE +A Q+PESR+QVWF+NRRAK
Sbjct: 419 QRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAK 583
>dbj|D84062.1|D84062 Halocynthia roretzi mRNA for otx/orthodenticle related
homeoprotein, complete cds
Length = 2701
Score = 75.5 bits (184), Expect = 3e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 395 QRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 559
>emb|AJ251846.1|XLA251846 Xenopus laevis mRNA for OTX5b protein (otx5b gene)
Length = 1575
Score = 75.1 bits (183), Expect = 3e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 402 QRRERTTFTRAQLDILESLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 566
>gb|U31537.1|CEU31537 Caenorhabditis elegans variable abnormal-3 (vab-3) mRNA, complete
cds (and male abnormal-18 (mab-18), 3' exons, partial
cds)
Length = 2549
Score = 75.1 bits (183), Expect = 3e-12
Identities = 34/54 (62%), Positives = 42/54 (76%)
Frame = +2
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E+LE F+ T YPD++ RERLA Q+PE+RIQVWF NRRAK
Sbjct: 908 QRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNRRAK 1069
>gb|U29184.1|CEU29184 Caenorhabditis elegans (mab-18) mRNA, transcript #2 with
alternative 5' exon, complete cds
Length = 1833
Score = 75.1 bits (183), Expect = 3e-12
Identities = 34/54 (62%), Positives = 42/54 (76%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E+LE F+ T YPD++ RERLA Q+PE+RIQVWF NRRAK
Sbjct: 195 QRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNRRAK 356
>ref|NM_077358.1| Caenorhabditis elegans
Length = 810
Score = 75.1 bits (183), Expect = 3e-12
Identities = 34/54 (62%), Positives = 42/54 (76%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E+LE F+ T YPD++ RERLA Q+PE+RIQVWF NRRAK
Sbjct: 94 QRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNRRAK 255
>gb|U29145.1|CEU29145 Caenorhabditis elegans (mab-18) mRNA, transcript #1, complete cds
Length = 1939
Score = 75.1 bits (183), Expect = 3e-12
Identities = 34/54 (62%), Positives = 42/54 (76%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E+LE F+ T YPD++ RERLA Q+PE+RIQVWF NRRAK
Sbjct: 301 QRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNRRAK 462
>ref|XM_002147.4| Homo sapiens aristaless-like homeobox 3 (ALX3), mRNA
Length = 1771
Score = 75.1 bits (183), Expect = 3e-12
Identities = 35/55 (63%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+F+ QLE LE VFQ T YPD+Y RE+LA T + E+R+QVWFQNRRAK
Sbjct: 457 KRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAK 621
>gb|AF305499.1|AF305499 Ciona intestinalis Otx mRNA, complete cds
Length = 1692
Score = 75.1 bits (183), Expect = 3e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 363 QRRERTTFTRAQLDILEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 527
>ref|NM_007441.1| Mus musculus aristaless 3 (Alx3), mRNA
Length = 1870
Score = 75.1 bits (183), Expect = 3e-12
Identities = 35/55 (63%), Positives = 43/55 (77%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+F+ QLE LE VFQ T YPD+Y RE+LA T + E+R+QVWFQNRRAK
Sbjct: 605 KRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAK 769
>gb|U96109.1|MMU96109 Mus musculus proline-rich transcription factor ALX3 (Alx3) mRNA,
complete cds
Length = 1870
Score = 75.1 bits (183), Expect = 3e-12
Identities = 35/55 (63%), Positives = 43/55 (77%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+F+ QLE LE VFQ T YPD+Y RE+LA T + E+R+QVWFQNRRAK
Sbjct: 605 KRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAK 769
>gb|M14941.1|DROPRD41 D.melanogaster PRD mRNA clone BSH4, homeo box region
Length = 240
Score = 75.1 bits (183), Expect = 3e-12
Identities = 35/55 (63%), Positives = 40/55 (72%)
Frame = -1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F T YPD+Y RE LA T + E+RIQVWF NRRA+
Sbjct: 180 QRRSRTTFTAEQLEALEGAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRAR 16
>ref|NM_077357.1| 'Paired box' domain, homeobox protein (paired subfamily)
Length = 1368
Score = 75.1 bits (183), Expect = 3e-12
Identities = 34/54 (62%), Positives = 42/54 (76%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E+LE F+ T YPD++ RERLA Q+PE+RIQVWF NRRAK
Sbjct: 652 QRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNRRAK 813
>ref|NM_006492.1| Homo sapiens aristaless-like homeobox 3 (ALX3), mRNA
Length = 1800
Score = 75.1 bits (183), Expect = 3e-12
Identities = 35/55 (63%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+F+ QLE LE VFQ T YPD+Y RE+LA T + E+R+QVWFQNRRAK
Sbjct: 457 KRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAK 621
>gb|AF008203.1|AF008203 Homo sapiens homeobox protein (Alx3) mRNA, complete cds
Length = 1800
Score = 75.1 bits (183), Expect = 3e-12
Identities = 35/55 (63%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+F+ QLE LE VFQ T YPD+Y RE+LA T + E+R+QVWFQNRRAK
Sbjct: 457 KRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAK 621
>dbj|AB057732.1|AB057732 Ciona savignyi Cs-OTX mRNA, complete cds
Length = 2393
Score = 75.1 bits (183), Expect = 3e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 353 QRRERTTFTRAQLDILEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 517
>dbj|AB034702.1|AB034702 Xenopus laevis Xotx5 mRNA, complete cds
Length = 1310
Score = 75.1 bits (183), Expect = 3e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 278 QRRERTTFTRAQLDILESLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 442
>emb|X81403.1|MAALX3 M.auratus mRNA for alx3
Length = 1744
Score = 75.1 bits (183), Expect = 3e-12
Identities = 35/55 (63%), Positives = 43/55 (77%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT+F+ QLE LE VFQ T YPD+Y RE+LA T + E+R+QVWFQNRRAK
Sbjct: 486 KRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAK 650
>ref|NM_053869.1| Rattus norvegicus aristaless (Drosophila) homeobox (Arix), mRNA
Length = 1608
Score = 74.7 bits (182), Expect = 4e-12
Identities = 36/55 (65%), Positives = 43/55 (77%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+AQL+ LE VF +T YPDIY RE LA + E+R+QVWFQNRRAK
Sbjct: 464 QRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 628
>gb|U25967.1|RNU25967 Rattus norvegicus Arix1 homeodomain protein mRNA, complete cds
Length = 1608
Score = 74.7 bits (182), Expect = 4e-12
Identities = 36/55 (65%), Positives = 43/55 (77%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+AQL+ LE VF +T YPDIY RE LA + E+R+QVWFQNRRAK
Sbjct: 464 QRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 628
>ref|NM_131333.1| Danio rerio visual system homeobox 1 protein (vsx1), mRNA
Length = 1587
Score = 74.7 bits (182), Expect = 4e-12
Identities = 35/55 (63%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FT+ QLE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 481 KRRHRTVFTSHQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAK 645
>gb|AF025348.2|AF025348 Danio rerio paired-like homeobox protein (Vsx-1) mRNA, complete cds
Length = 1587
Score = 74.7 bits (182), Expect = 4e-12
Identities = 35/55 (63%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FT+ QLE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 481 KRRHRTVFTSHQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAK 645
>gb|U07056.1|CAU07056 Carassius auratus Vsx-1 homeobox protein mRNA, complete cds
Length = 1588
Score = 74.7 bits (182), Expect = 4e-12
Identities = 35/55 (63%), Positives = 41/55 (73%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FT+ QLE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 471 KRRHRTVFTSHQLEELEKAFHEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAK 635
>emb|AJ250404.1|OLA250404 Oryzias latipes mRNA for Vsx2 transcription factor
Length = 1842
Score = 74.7 bits (182), Expect = 4e-12
Identities = 35/55 (63%), Positives = 41/55 (73%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FT+ QLE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 543 KRRHRTIFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAK 707
>ref|NM_013109.1| Rattus norvegicus Orthodenticle (Drosophila) homolog 1 (Otx1),
mRNA
Length = 1230
Score = 74.7 bits (182), Expect = 4e-12
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 154 QRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 318
>gb|L32602.1|RATOTX1X Rattus norvegicus OTX1 mRNA, complete cds
Length = 1230
Score = 74.7 bits (182), Expect = 4e-12
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 154 QRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 318
>ref|NM_007701.1| Mus musculus C. elegans ceh-10 homeo domain containing homolog
(Chx10), mRNA
Length = 3089
Score = 74.7 bits (182), Expect = 4e-12
Identities = 35/55 (63%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FT+ QLE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 442 KRRHRTIFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAK 606
>dbj|AB041043.1|AB041043 Stichopus japonicus Sj-Otx mRNA for orthodenticle, complete cds
Length = 1438
Score = 74.7 bits (182), Expect = 4e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 650 QRRERTTFTRAQLDVLEDLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 814
>gb|L34808.1|MUSCHX10A Mus musculus (clone 6) homeobox protein (Chx10) mRNA, complete cds
Length = 3089
Score = 74.7 bits (182), Expect = 4e-12
Identities = 35/55 (63%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FT+ QLE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 442 KRRHRTIFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAK 606
>gb|BC007621.1|BC007621 Homo sapiens, Similar to Orthodenticle (Drosophila) homolog 1,
clone MGC:15736 IMAGE:3355563, mRNA, complete cds
Length = 2155
Score = 74.7 bits (182), Expect = 4e-12
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 332 QRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 496
>emb|X68883.1|MMOTX1 M.musculus Otx1 mRNA
Length = 204
Score = 74.7 bits (182), Expect = 4e-12
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 22 QRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 186
>gb|AY040536.1| Schistocerca americana pairberry 2 transcription factor (pby2)
mRNA, partial cds
Length = 1156
Score = 74.7 bits (182), Expect = 4e-12
Identities = 35/55 (63%), Positives = 41/55 (73%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+F+ QLETLE FQ T YPD+Y RE LA T + E+RIQVWF NRRA+
Sbjct: 401 QRRSRTTFSGDQLETLERAFQRTQYPDVYTREELARRTGLSEARIQVWFSNRRAR 565
>gb|AF178671.1|AF178671 Gallus gallus homeobox protein Chx10 (chx10) mRNA, complete cds
Length = 2186
Score = 74.7 bits (182), Expect = 4e-12
Identities = 35/55 (63%), Positives = 41/55 (73%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FT+ QLE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 507 KRRHRTIFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAK 671
>ref|XM_049268.1| Homo sapiens similar to HOMEOBOX PROTEIN OTX1 (LOC93105), mRNA
Length = 2138
Score = 74.7 bits (182), Expect = 4e-12
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 332 QRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 496
>ref|NM_005169.1| Homo sapiens aristaless homeobox (Drosophila) (ARIX), mRNA
Length = 1026
Score = 74.7 bits (182), Expect = 4e-12
Identities = 36/55 (65%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+AQL+ LE VF +T YPDIY RE LA + E+R+QVWFQNRRAK
Sbjct: 439 QRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 603
>gb|AF004318.1|AF004318 Carassius auratus paired-like homeobox protein (Vsx-2) mRNA,
partial cds
Length = 1581
Score = 74.7 bits (182), Expect = 4e-12
Identities = 35/55 (63%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FT+ QLE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 295 KRRHRTIFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAK 459
>emb|AJ223627.1|TCAJ3627 Tribolium castaneum mRNA for orthodenticle-1 protein
Length = 1959
Score = 74.7 bits (182), Expect = 4e-12
Identities = 34/55 (61%), Positives = 44/55 (79%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT AQL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 503 QRRERTTFTRAQLDLLEGLFAKTRYPDIFMREEVAVKINLPESRVQVWFKNRRAK 667
>ref|NM_008888.1| Mus musculus paired mesoderm homeobox 2b (Pmx2b), mRNA
Length = 1604
Score = 74.7 bits (182), Expect = 4e-12
Identities = 36/55 (65%), Positives = 43/55 (77%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+AQL+ LE VF +T YPDIY RE LA + E+R+QVWFQNRRAK
Sbjct: 510 QRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 674
>dbj|AB066289.1|AB066289 Leucopsarion petersii otx1 gene for transcriptional factor,
complete cds
Length = 1542
Score = 74.7 bits (182), Expect = 4e-12
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 221 QRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 385
>emb|Y14493.1|MMPHOX2B Mus musculus mRNA for PHOX2b protein
Length = 1604
Score = 74.7 bits (182), Expect = 4e-12
Identities = 36/55 (65%), Positives = 43/55 (77%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+AQL+ LE VF +T YPDIY RE LA + E+R+QVWFQNRRAK
Sbjct: 510 QRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 674
>ref|XM_084561.1| Homo sapiens aristaless homeobox (Drosophila) (ARIX), mRNA
Length = 1678
Score = 74.7 bits (182), Expect = 4e-12
Identities = 36/55 (65%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+AQL+ LE VF +T YPDIY RE LA + E+R+QVWFQNRRAK
Sbjct: 439 QRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 603
>gb|U20792.1|MMU20792 Mus musculus Pax7 mRNA, partial cds
Length = 872
Score = 74.7 bits (182), Expect = 4e-12
Identities = 35/55 (63%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA T++ E+R QVWF NRRA+
Sbjct: 541 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARFQVWFSNRRAR 705
>ref|XM_003368.1| Homo sapiens paired mesoderm homeobox 2b (PMX2B), mRNA
Length = 3029
Score = 74.7 bits (182), Expect = 4e-12
Identities = 36/55 (65%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+AQL+ LE VF +T YPDIY RE LA + E+R+QVWFQNRRAK
Sbjct: 652 QRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 816
>ref|NM_003924.2| Homo sapiens paired mesoderm homeobox 2b (PMX2B), mRNA
Length = 3029
Score = 74.7 bits (182), Expect = 4e-12
Identities = 36/55 (65%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+AQL+ LE VF +T YPDIY RE LA + E+R+QVWFQNRRAK
Sbjct: 652 QRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 816
>dbj|D82344.1|D82344 Homo sapiens mRNA for NBPhox, complete cds
Length = 3029
Score = 74.7 bits (182), Expect = 4e-12
Identities = 36/55 (65%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+AQL+ LE VF +T YPDIY RE LA + E+R+QVWFQNRRAK
Sbjct: 652 QRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 816
>ref|XM_063425.1| Homo sapiens similar to Homeobox protein CHX10 (Ceh-10 homeodomain
containing homolog) (LOC122965), mRNA
Length = 1701
Score = 74.7 bits (182), Expect = 4e-12
Identities = 35/55 (63%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FT+ QLE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 1000 KRRHRTIFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAK 1164
>ref|NM_008887.1| Mus musculus aristaless homeobox gene homolog (Drosophila) (Arix),
mRNA
Length = 1463
Score = 74.7 bits (182), Expect = 4e-12
Identities = 36/55 (65%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+AQL+ LE VF +T YPDIY RE LA + E+R+QVWFQNRRAK
Sbjct: 295 QRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 459
>emb|X75014.1|MMPHOXH M.musculus Phox2 mRNA for homeodomain protein
Length = 1463
Score = 74.7 bits (182), Expect = 4e-12
Identities = 36/55 (65%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+AQL+ LE VF +T YPDIY RE LA + E+R+QVWFQNRRAK
Sbjct: 295 QRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 459
>gb|BC017199.1|BC017199 Homo sapiens, paired mesoderm homeobox 2b, clone MGC:1678
IMAGE:3161284, mRNA, complete cds
Length = 1506
Score = 74.7 bits (182), Expect = 4e-12
Identities = 36/55 (65%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+AQL+ LE VF +T YPDIY RE LA + E+R+QVWFQNRRAK
Sbjct: 397 QRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 561
>dbj|D26172.1|ZEFOTX1 Zebrafish otx1 mRNA for otx homeoprotein, complete cds
Length = 1629
Score = 74.3 bits (181), Expect = 6e-12
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 527 QRRERTTFTRSQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 691
>ref|NM_131250.1| Danio rerio orthodenticle homolog 1 (otx1), mRNA
Length = 2083
Score = 74.3 bits (181), Expect = 6e-12
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 155 QRRERTTFTRSQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 319
>gb|U14591.1|DRU14591 Danio rerio orthodenticle-related protein 1 (zOtx1) mRNA, complete
cds
Length = 2083
Score = 74.3 bits (181), Expect = 6e-12
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 155 QRRERTTFTRSQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 319
>gb|AY029294.1| Xenopus laevis transcription factor Otx1 (Otx1) mRNA, complete cds
Length = 2174
Score = 74.3 bits (181), Expect = 6e-12
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 266 QRRERTTFTRSQLDVLESLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 430
>gb|BC008826.1|BC008826 Homo sapiens, paired box gene 3 (Waardenburg syndrome 1), clone
MGC:12856 IMAGE:4099446, mRNA, complete cds
Length = 2827
Score = 73.9 bits (180), Expect = 7e-12
Identities = 34/55 (61%), Positives = 41/55 (73%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA ++ E+R+QVWF NRRA+
Sbjct: 839 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 1003
>gb|AF165886.1|AF165886 Branchiostoma floridae paired-box transcription factor (Pax3/7)
mRNA, complete cds
Length = 1913
Score = 73.9 bits (180), Expect = 7e-12
Identities = 34/55 (61%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT QLE LE F+ T YPDIY RE LA T++ E+R+QVWF NRRA+
Sbjct: 703 QRRSRTTFTPEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR 867
>gb|AF178854.1|AF178854 Synthetic construct Pax3-forkhead fusion protein (Pax3/FKHR) mRNA,
complete cds
Length = 2725
Score = 73.9 bits (180), Expect = 7e-12
Identities = 34/55 (61%), Positives = 41/55 (73%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA ++ E+R+QVWF NRRA+
Sbjct: 863 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 1027
>gb|U14621.1|PLU14621 Paracentrotus lividus Pax-6 (suPax-6) mRNA, complete cds
Length = 5015
Score = 73.9 bits (180), Expect = 7e-12
Identities = 34/54 (62%), Positives = 41/54 (74%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFTA Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1324 QRNRTSFTAQQIEELEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNRRAK 1485
>gb|L07483.1|HUMPBH3B Homo sapiens paired-box protein (PAX3) mRNA, partial exon
Length = 834
Score = 73.9 bits (180), Expect = 7e-12
Identities = 34/55 (61%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA ++ E+R+QVWF NRRA+
Sbjct: 112 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 276
>gb|AF160992.1|AF160992 Podocoryne carnea (jellyfish) homeodomain protein Otx (Otx) mRNA,
complete cds
Length = 850
Score = 73.9 bits (180), Expect = 7e-12
Identities = 34/55 (61%), Positives = 43/55 (77%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT +QLE LE +F T YPDI++RE A +PESR+QVWF+NRRAK
Sbjct: 181 QRRERTTFTKSQLEILEDLFAKTHYPDIFMREEAARKINLPESRVQVWFKNRRAK 345
>ref|NM_131277.1| Danio rerio paired box gene 3 (pax3), mRNA
Length = 2734
Score = 73.9 bits (180), Expect = 7e-12
Identities = 34/55 (61%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA ++ E+R+QVWF NRRA+
Sbjct: 934 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 1098
>gb|AF014366.1|AF014366 Danio rerio transcription factor PAX3 (pax3) mRNA, complete cds
Length = 2734
Score = 73.9 bits (180), Expect = 7e-12
Identities = 34/55 (61%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA ++ E+R+QVWF NRRA+
Sbjct: 934 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 1098
>ref|NM_008781.1| Mus musculus paired box gene 3 (Pax3), mRNA
Length = 2347
Score = 73.9 bits (180), Expect = 7e-12
Identities = 34/55 (61%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA ++ E+R+QVWF NRRA+
Sbjct: 952 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 1116
>gb|AF000673.1|AF000673 Coturnix coturnix paired-box transcription factor protein (Pax-3)
mRNA, partial cds
Length = 3080
Score = 73.9 bits (180), Expect = 7e-12
Identities = 34/55 (61%), Positives = 41/55 (73%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA ++ E+R+QVWF NRRA+
Sbjct: 642 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 806
>emb|X59358.1|MMPAX3R Mouse Pax-3 gene for a DNA binding protein, involved in early
neurogenesis
Length = 2347
Score = 73.9 bits (180), Expect = 7e-12
Identities = 34/55 (61%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA ++ E+R+QVWF NRRA+
Sbjct: 952 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 1116
>dbj|AK014337.1|AK014337 Mus musculus 14, 17 days embryo head cDNA, RIKEN full-length
enriched library, clone:3230402M02:paired box gene 3,
full insert sequence
Length = 1891
Score = 73.9 bits (180), Expect = 7e-12
Identities = 34/55 (61%), Positives = 41/55 (73%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA ++ E+R+QVWF NRRA+
Sbjct: 744 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 908
>gb|U02368.1|HSU02368 Human PAX3/forkhead transcription factor gene fusion mRNA, complete
cds
Length = 3200
Score = 73.9 bits (180), Expect = 7e-12
Identities = 34/55 (61%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FTA QLE LE F+ T YPDIY RE LA ++ E+R+QVWF NRRA+
Sbjct: 703 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 867
>emb|X95594.1|LSPAX6GEN L.sanguineus pax6 gene
Length = 1483
Score = 73.9 bits (180), Expect = 7e-12
Identities = 34/54 (62%), Positives = 41/54 (74%)
Frame = +2
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT AQ+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1076 QRNRTSFTNAQIEALEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNRRAK 1237
>ref|NM_077965.1| Homeobox domain
Length = 837
Score = 73.9 bits (180), Expect = 7e-12
Identities = 32/54 (59%), Positives = 44/54 (81%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
RR+RT+++ QLE LE +F +T YPD++ RER+AD ++ ESRIQVWF+NRRAK
Sbjct: 124 RRERTTYSRQQLEILETLFNETQYPDVFARERVADQIRLQESRIQVWFKNRRAK 285
>dbj|D84254.1|D84254 Halocynthia roretzi mRNA for Pax-37, complete cds
Length = 2573
Score = 73.6 bits (179), Expect = 1e-11
Identities = 34/55 (61%), Positives = 42/55 (75%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+F+A QLE LE F+ T YPDIY RE LA T++ E+R+QVWF NRRA+
Sbjct: 679 QRRSRTTFSADQLEELERCFERTHYPDIYTREELAQRTRLTEARVQVWFSNRRAR 843
>gb|AE003634.1|AE003634 Drosophila melanogaster genomic scaffold 142000013386055 section 27 of
63, complete sequence
Length = 264752
Score = 73.6 bits (179), Expect = 1e-11
Identities = 34/55 (61%), Positives = 42/55 (75%)
Frame = -1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+F+A+QL+ LE F+ T YPDIY RE LA T + E+RIQVWF NRRA+
Sbjct: 259589 QRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRAR 259425
>ref|NM_131215.1| Danio rerio orthodenticle homolog 3 (otx3), mRNA
Length = 1251
Score = 73.6 bits (179), Expect = 1e-11
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT QL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 346 QRRERTTFTRTQLDILESLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 510
>dbj|D26174.1|ZEFOTX3 Zebrafish otx3 mRNA for otx homeoprotein, complete cds
Length = 1251
Score = 73.6 bits (179), Expect = 1e-11
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR+RT+FT QL+ LE +F T YPDI++RE +A +PESR+QVWF+NRRAK
Sbjct: 346 QRRERTTFTRTQLDILESLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAK 510
>ref|NM_131462.1| Danio rerio C. elegans CEH-10 homeodomain-containing homolog (alx),
mRNA
Length = 1733
Score = 73.6 bits (179), Expect = 1e-11
Identities = 34/55 (61%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FT+ +LE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 559 KRRHRTIFTSYELEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAK 723
>gb|U62898.1|DRU62898 Danio rerio ALX (alx) mRNA, complete cds
Length = 1733
Score = 73.6 bits (179), Expect = 1e-11
Identities = 34/55 (61%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FT+ +LE LE F + YPD+Y RE LA T++PE RIQVWFQNRRAK
Sbjct: 559 KRRHRTIFTSYELEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAK 723
>ref|NM_078832.1| Drosophila melanogaster paired (prd), mRNA
Length = 2348
Score = 73.6 bits (179), Expect = 1e-11
Identities = 34/55 (61%), Positives = 42/55 (75%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+F+A+QL+ LE F+ T YPDIY RE LA T + E+RIQVWF NRRA+
Sbjct: 806 QRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRAR 970
>gb|AY059447.1| Drosophila melanogaster GH22686 full length cDNA
Length = 2348
Score = 73.6 bits (179), Expect = 1e-11
Identities = 34/55 (61%), Positives = 42/55 (75%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+F+A+QL+ LE F+ T YPDIY RE LA T + E+RIQVWF NRRA+
Sbjct: 806 QRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRAR 970
>gb|AC011066.5|AC011066 Drosophila melanogaster, chromosome 2L, region 33B-33C, BAC clone
BACR02B06, complete sequence
Length = 174314
Score = 73.6 bits (179), Expect = 1e-11
Identities = 34/55 (61%), Positives = 42/55 (75%)
Frame = -2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+F+A+QL+ LE F+ T YPDIY RE LA T + E+RIQVWF NRRA+
Sbjct: 75421 QRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRAR 75257
>gb|M14548.1|DROPRD D.melanogaster paired gene (prd) encoding a segmentation protein,
complete cds
Length = 3042
Score = 73.6 bits (179), Expect = 1e-11
Identities = 34/55 (61%), Positives = 42/55 (75%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+F+A+QL+ LE F+ T YPDIY RE LA T + E+RIQVWF NRRA+
Sbjct: 1489 QRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRAR 1653
>gb|AY038071.1| Homo sapiens aristaless-related homeobox protein ARX mRNA, partial
cds
Length = 1686
Score = 72.4 bits (176), Expect(2) = 1e-11
Identities = 34/55 (61%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+ QLE LE FQ T YPD++ RE LA + E+R+QVWFQNRRAK
Sbjct: 982 QRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAK 1146
Score = 21.2 bits (43), Expect(2) = 1e-11
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 144 RAREEHREWPPRAAGPPGSALR 165
+A E R PP A PG+ALR
Sbjct: 1152 QAGEGRRADPPPWAALPGAALR 1217
>gb|AF068263.1|AF068263 Xenopus laevis Mix-like endodermal regulator (Mixer) mRNA, complete
cds
Length = 1457
Score = 73.2 bits (178), Expect = 1e-11
Identities = 35/55 (63%), Positives = 41/55 (73%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRRKRT ++ +L+ LE FQ MYPDI+ RE LA IPESR+QVWFQNRRAK
Sbjct: 314 QRRKRTFYSQNKLDVLEQFFQTNMYPDIHHREELAKRIYIPESRVQVWFQNRRAK 478
>ref|NM_065850.1| Caenorhabditis elegans
Length = 1035
Score = 73.2 bits (178), Expect = 1e-11
Identities = 35/55 (63%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR RT FT Q++ LE FQD+ YPDIY RE LA T++ E RIQVWFQNRRAK
Sbjct: 406 KRRHRTIFTQYQIDELEKAFQDSHYPDIYAREVLAGKTELQEDRIQVWFQNRRAK 570
>gb|AF081350.1|AF081350 Xenopus laevis homeodomain protein Mix.3 mRNA, complete cds
Length = 1597
Score = 73.2 bits (178), Expect = 1e-11
Identities = 35/55 (63%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRRKRT ++ +L+ LE FQ MYPDI+ RE LA IPESR+QVWFQNRRAK
Sbjct: 328 QRRKRTFYSQNKLDVLEQFFQTNMYPDIHHREELAKRIYIPESRVQVWFQNRRAK 492
>gb|M85303.1|SCMSMOXIII Schistosoma mansoni paired-like homeodomain protein (smox-3) mRNA,
partial cds
Length = 865
Score = 72.8 bits (177), Expect = 2e-11
Identities = 35/55 (63%), Positives = 42/55 (75%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+ QL+ LE FQ+T YPDIY RE LA + E+R+QVWFQNRRAK
Sbjct: 10 QRRIRTTFTSLQLKELERAFQETHYPDIYTREDLALRIDLTEARVQVWFQNRRAK 174
>ref|NM_077459.1| homeobox protein (otd subfamily)
Length = 1089
Score = 72.8 bits (177), Expect = 2e-11
Identities = 34/55 (61%), Positives = 42/55 (75%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+F+A QL+ LE VF T YPD++ RE LA Q+ E+R+QVWFQNRRAK
Sbjct: 349 QRRYRTTFSAFQLDELEKVFARTHYPDVFTREELATRVQLTEARVQVWFQNRRAK 513
>ref|NM_007492.1| Mus musculus aristaless related homeobox gene (Drosophila) (Arx),
mRNA
Length = 1913
Score = 72.4 bits (176), Expect = 2e-11
Identities = 34/55 (61%), Positives = 41/55 (73%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+ QLE LE FQ T YPD++ RE LA + E+R+QVWFQNRRAK
Sbjct: 1080 QRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAK 1244
>dbj|AB006103.1|AB006103 Mus musculus mRNA for Arx homeoprotein, complete cds
Length = 1913
Score = 72.4 bits (176), Expect = 2e-11
Identities = 34/55 (61%), Positives = 41/55 (73%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+ QLE LE FQ T YPD++ RE LA + E+R+QVWFQNRRAK
Sbjct: 1080 QRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAK 1244
>ref|NM_131384.1| Danio rerio aristaless related homeobox gene (arx), mRNA
Length = 1414
Score = 72.4 bits (176), Expect = 2e-11
Identities = 34/55 (61%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+ QLE LE FQ T YPD++ RE LA + E+R+QVWFQNRRAK
Sbjct: 643 QRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAK 807
>dbj|AB006104.1|AB006104 Danio rerio mRNA for Arx homeoprotein, complete cds
Length = 1414
Score = 72.4 bits (176), Expect = 2e-11
Identities = 34/55 (61%), Positives = 41/55 (73%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+ QLE LE FQ T YPD++ RE LA + E+R+QVWFQNRRAK
Sbjct: 643 QRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAK 807
>gb|AF241311.1|AF241311 Acropora millepora transcription factor PaxD (PaxD) mRNA, complete
cds
Length = 2092
Score = 72.4 bits (176), Expect = 2e-11
Identities = 33/55 (60%), Positives = 38/55 (69%)
Frame = +2
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT FT AQL LE FQ T YPD+Y RE LA + E+R+QVWF NRRA+
Sbjct: 767 QRRSRTKFTHAQLNALEKAFQKTQYPDVYTREELAHRLSLTEARVQVWFSNRRAR 931
>dbj|AB061220.1|AB061220 Lampetra japonica mRNA for paired box transcription factor Pax6,
complete cds
Length = 2742
Score = 72.4 bits (176), Expect = 2e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +2
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1106 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLASKIDLPEARIQVWFSNRRAK 1267
>ref|NM_079110.1| Drosophila melanogaster Putative homeodomain protein (PHDP), mRNA
Length = 663
Score = 72.0 bits (175), Expect = 3e-11
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+FT+ QL LE +F +T YPDIY RE +A + E+R+QVWFQNRRAK
Sbjct: 334 QRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAK 498
>dbj|AB017632.1|AB017632 Dugesia japonica mRNA for DjPax-6, complete cds
Length = 2006
Score = 72.0 bits (175), Expect = 3e-11
Identities = 32/54 (59%), Positives = 42/54 (77%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSF+ QL++LE F+ T YPD++ RE+LAD +PE+RIQVWF NRRAK
Sbjct: 1005 QRNRTSFSTDQLDSLEKEFERTHYPDVFAREKLADKISLPEARIQVWFSNRRAK 1166
>gb|AF081948.1|AF081948 Girardia tigrina homeobox protein (Otx) mRNA, partial cds
Length = 586
Score = 72.0 bits (175), Expect = 3e-11
Identities = 32/54 (59%), Positives = 41/54 (75%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
RR RT+FT QLE LEL F+ YPDI+LR+ ++ +PESR+QVWF+NRRAK
Sbjct: 97 RRDRTTFTRQQLEILELHFEKNRYPDIFLRDEISSKINLPESRVQVWFKNRRAK 258
>dbj|AB008834.1|AB008834 Dugesia japonica DjotxA mRNA, complete cds
Length = 2183
Score = 72.0 bits (175), Expect = 3e-11
Identities = 32/54 (59%), Positives = 41/54 (75%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
RR RT+FT QLE LEL F+ YPDI+LR+ ++ +PESR+QVWF+NRRAK
Sbjct: 774 RRDRTTFTRQQLEILELHFEKNRYPDIFLRDEISSKINLPESRVQVWFKNRRAK 935
>gb|AY028904.1| Girardia tigrina Pax6A mRNA, partial cds
Length = 1392
Score = 72.0 bits (175), Expect = 3e-11
Identities = 32/54 (59%), Positives = 42/54 (77%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSF+ QL++LE F+ T YPD++ RE+LAD +PE+RIQVWF NRRAK
Sbjct: 667 QRNRTSFSTDQLDSLEKEFERTHYPDVFAREKLADKISLPEARIQVWFSNRRAK 828
>emb|AJ307468.1|MMU307468 Mus musculus mRNA for paired box protein (Pax-6 gene)
Length = 1469
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +2
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 782 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 943
>emb|Y19199.1|MMUY19199 Mus musculus partial Pax-6 gene for paired box protein, PAX6-7NEU
Length = 1469
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +2
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 782 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 943
>emb|Y19198.1|MMUY19198 Mus musculus partial Pax-6 gene for paired box protein, clone
PAX6-6NEU
Length = 1469
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +2
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 782 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 943
>emb|Y19197.1|MMUY19197 Mus musculus partial Pax-6 gene for paired box protein, clone
PAX6-5NEU
Length = 1469
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +2
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 782 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 943
>gb|AF169414.1|AF169414 Ambystoma mexicanum paired-box transcription factor -+ isoform
(Pax6) mRNA, partial cds
Length = 1963
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 625 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 786
>dbj|D87837.1|D87837 Gallus gallus mRNA for PAX6 protein, complete cds
Length = 1964
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1002 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1163
>emb|AJ223441.1|BFL223441 Branchiostoma floridae Pax6 gene (AmphiPax6), clone J2
Length = 4654
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1285 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1446
>gb|AF169412.1|AF169412 Ambystoma mexicanum paired-box transcription factor ++ isoform
(Pax6) mRNA, partial cds
Length = 2005
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 667 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 828
>ref|NM_013627.1| Mus musculus paired box gene 6 (Pax6), mRNA
Length = 2481
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 835 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 996
>emb|X63963.1|MMPAX6PBP M.musculus pax-6 mRNA for paired box protein
Length = 2481
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 835 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 996
>ref|NM_001604.2| Homo sapiens paired box gene 6 (aniridia, keratitis) (PAX6), mRNA
Length = 1740
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1090 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1251
>gb|AF154556.1|AF154556 Xenopus laevis paired domain transcription factor variant A (Pax-6)
mRNA, Pax-6-1 allele, complete cds
Length = 2213
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1062 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1223
>gb|AF154555.1|AF154555 Xenopus laevis paired domain transcription factor variant A (Pax-6)
mRNA, Pax-6-2 allele, complete cds
Length = 2211
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1060 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1221
>emb|Y07547.1|AFPAX6C72 Astyanax fasciatus mRNA for PAX-6 protein, clone cave 7-2
Length = 2211
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1339 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1500
>gb|U77532.1|XLU77532 Xenopus laevis Pax6 mRNA, complete cds
Length = 2487
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1203 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1364
>dbj|D88741.1|D88741 Cynops pyrrhogaster mRNA for PAX6 LL, PAX6 SL, PAX6 LS, PAX6 SS
Length = 2417
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 853 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1014
>emb|AJ223444.1|BFL223444 Branchiostoma floridae Pax6 gene (AmphiPax6), clone 12.2
Length = 2884
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +2
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1322 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1483
>gb|BC011953.1|BC011953 Homo sapiens, Similar to paired box gene 6 (aniridia, keratitis),
clone MGC:17209 IMAGE:3880468, mRNA, complete cds
Length = 1631
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 972 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1133
>dbj|AK019971.1|AK019971 Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:5730524N22:paired related
homeobox 2, full insert sequence
Length = 1071
Score = 71.6 bits (174), Expect = 4e-11
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+F ++QL+ LE VF+ T YPD ++RE LA + E+R+QVWFQNRRAK
Sbjct: 327 QRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAK 491
>gb|M77842.1|MUSSEYA Mus musculus oculorhombin (Sey) mRNA, complete cds
Length = 1624
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 501 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 662
>ref|NM_009116.1| Mus musculus paired related homeobox 2 (Prrx2), mRNA
Length = 1221
Score = 71.6 bits (174), Expect = 4e-11
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+F ++QL+ LE VF+ T YPD ++RE LA + E+R+QVWFQNRRAK
Sbjct: 447 QRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAK 611
>emb|X52875.1|MMHOMEOS8 Mouse homeobox gene Prx2 mRNA
Length = 1221
Score = 71.6 bits (174), Expect = 4e-11
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+F ++QL+ LE VF+ T YPD ++RE LA + E+R+QVWFQNRRAK
Sbjct: 447 QRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAK 611
>ref|NM_013001.1| Rattus norvegicus Paired box homeotic gene 6 (Pax6), mRNA
Length = 2550
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1011 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1172
>gb|AF169413.1|AF169413 Ambystoma mexicanum paired-box transcription factor +- isoform
(Pax6) mRNA, partial cds
Length = 1854
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 667 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 828
>gb|U69644.1|RNU69644 Rattus norvegicus Pax-6 mRNA, comlete cds
Length = 2550
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1011 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1172
>ref|NM_131304.1| Danio rerio paired box gene 6a (pax6a), mRNA
Length = 2809
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1218 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1379
>emb|X63183.1|BRPAX6 B.rerio pax-6 mRNA
Length = 2809
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1218 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1379
>gb|AF114441.1|AF114441 Hydra vulgaris homeobox protein Otx (CnOtx) mRNA, complete cds
Length = 1355
Score = 71.6 bits (174), Expect = 4e-11
Identities = 31/55 (56%), Positives = 44/55 (79%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+RR+RT+FT AQL+ LE +F TMYPD+++RE +A + E+R+QVWF+NRRAK
Sbjct: 100 RRRERTTFTKAQLDVLEDMFGKTMYPDVFMREEVAKKINLAEARVQVWFKNRRAK 264
>gb|U76386.1|XLU76386 Xenopus laevis paired-type homeodomain (Pax-6) mRNA, complete cds
Length = 2009
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1174 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1335
>ref|NM_016307.2| Homo sapiens paired related homeobox protein (PRX2), mRNA
Length = 1110
Score = 71.6 bits (174), Expect = 4e-11
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+F ++QL+ LE VF+ T YPD ++RE LA + E+R+QVWFQNRRAK
Sbjct: 340 QRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAK 504
>gb|AF061970.1|AF061970 Homo sapiens paired related homeobox protein (PRX2) mRNA, complete
cds
Length = 1110
Score = 71.6 bits (174), Expect = 4e-11
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+F ++QL+ LE VF+ T YPD ++RE LA + E+R+QVWFQNRRAK
Sbjct: 340 QRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAK 504
>gb|U77178.1|TAU77178 Triturus alpestris paired box homeodomain protein TPAX6 (Pax6)
mRNA, partial cds
Length = 699
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 205 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 366
>emb|AJ000938.1|OLJ000938 Oryzias latipes, Pax6 gene
Length = 2178
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1146 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1307
>dbj|AB002408.1|AB002408 Oryzias sp. mRNA for mdkPax-6, partial cds
Length = 638
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 250 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 411
>emb|X61389.1|BRPAXZFA B.rerio mRNA for Pax[zf-a]
Length = 2738
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1153 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1314
>ref|NM_000280.1| Homo sapiens paired box gene 6 (aniridia, keratitis) (PAX6), mRNA
Length = 1698
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1048 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1209
>gb|AF154553.1|AF154553 Xenopus laevis paired domain transcription factor variant B (Pax-6)
mRNA, Pax-6-1 allele, complete cds
Length = 1980
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 997 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1158
>gb|M93650.1|HUMPAX6AN Human paired box gene (PAX6) homologue, complete cds
Length = 1698
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1048 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1209
>gb|AY047583.1| Homo sapiens paired box protein PAX6 (PAX6) mRNA, complete cds
Length = 1399
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +2
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 761 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 922
>emb|Y07546.1|AFPAX6C23 Astyanax fasciatus mRNA for PAX-6 protein, clone cave 2-3
Length = 2065
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +2
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1193 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1354
>gb|AF154552.1|AF154552 Xenopus laevis paired domain transcription factor variant B (Pax-6)
mRNA, Pax-6-3 allele, complete cds
Length = 1882
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 880 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1041
>emb|Y19195.1|MMUY19195 Mus musculus partial Pax-6 gene for paired box protein, clone
PAX6-3NEU
Length = 1470
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 783 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 944
>emb|AJ223440.1|BFL223440 Branchiostoma floridae Pax6 gene (AmphiPax6) clone 12.1
Length = 4596
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +2
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1220 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1381
>emb|X79695.1|GGPRX2 G.gallus Prx-2 (S8) mRNA
Length = 849
Score = 71.6 bits (174), Expect = 4e-11
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = +1
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+F ++QL+ LE VF+ T YPD ++RE LA + E+R+QVWFQNRRAK
Sbjct: 46 QRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAK 210
>gb|U64513.1|XLU64513 Xenopus laevis Xpax6 mRNA, complete cds
Length = 1270
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 631 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 792
>ref|NM_131641.1| Danio rerio paired box gene 6b (pax6b), mRNA
Length = 1733
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 948 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1109
>gb|BC014645.1|BC014645 Homo sapiens, Similar to paired related homeobox protein, clone
MGC:19843 IMAGE:4553935, mRNA, complete cds
Length = 1327
Score = 71.6 bits (174), Expect = 4e-11
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = +3
Query: 58 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
QRR RT+F ++QL+ LE VF+ T YPD ++RE LA + E+R+QVWFQNRRAK
Sbjct: 537 QRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAK 701
>gb|BC011272.1|BC011272 Mus musculus, clone MGC:18454 IMAGE:4008490, mRNA, complete cds
Length = 2580
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +2
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1202 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1363
>gb|AF061252.1|AF061252 Danio rerio Pax-family transcription factor 6.2 (pax6.2) mRNA,
complete cds
Length = 1733
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 948 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1109
>gb|AF443223.1|AF443223 Mus musculus PAX6 mRNA, partial cds, alternatively spliced
Length = 1058
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 571 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 732
>dbj|AB079883.1| Ciona intestinalis mRNA for Pax6, complete cds
Length = 1930
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 759 QRNRTSFTQIQVEALEKEFERTHYPDVFARERLATKIDLPEARIQVWFSNRRAK 920
>gb|S74393.1|S74393 Pax-6 [rats, small eye rSey, mRNA Partial Mutant, 1292 nt]
Length = 1292
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +2
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 353 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 514
>gb|AF154557.1|AF154557 Xenopus laevis paired domain transcription factor variant B (Pax-6)
mRNA, Pax-6-2 allele, complete cds
Length = 2028
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1018 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1179
>gb|AF154554.1|AF154554 Xenopus laevis paired domain transcription factor variant B (Pax-6)
mRNA, Pax-6-4 allele, partial cds
Length = 1207
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 711 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 872
>gb|AF169415.1|AF169415 Ambystoma mexicanum paired-box transcription factor -- isoform
(Pax6) mRNA, partial cds
Length = 1812
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +1
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 625 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 786
>gb|AY064175.1| Mus musculus Pax6 paired-less isoform mRNA, complete cds
Length = 1125
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +3
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 381 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 542
>emb|X70475.1|CCPAX C. coturnix mRNA for paired box and homeobox gene
Length = 2509
Score = 71.6 bits (174), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (73%)
Frame = +2
Query: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAK 112
+R RTSFT Q+E LE F+ T YPD++ RERLA +PE+RIQVWF NRRAK
Sbjct: 1007 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 1168
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 23, 2002 12:49 AM
Number of letters in database: 626,783,262
Number of sequences in database: 1,168,056
Lambda K H
0.323 0.136 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 664,030,485
Number of Sequences: 1168056
Number of extensions: 4547189
Number of successful extensions: 53122
Number of sequences better than 10.0: 3673
Number of HSP's better than 10.0 without gapping: 37067
Number of HSP's successfully gapped in prelim test: 832
Number of HSP's that attempted gapping in prelim test: 10756
Number of HSP's gapped (non-prelim): 44793
length of query: 210
length of database: 1,640,583,519
effective HSP length: 129
effective length of query: 81
effective length of database: 1,489,904,295
effective search space: 120682247895
effective search space used: 120682247895
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 75 (33.5 bits)