TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(464 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,171,752 sequences; 566,364,212 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
gb|AF192787.1|AF192787 Gallus gallus makorin 1 (MKRN1) mRNA... 719 0.0
gb|AF192786.1|AF192786 Macropus eugenii makorin 1 (MKRN1) m... 627 e-178
emb|AL136812.1|HSM801780 Homo sapiens mRNA; cDNA DKFZp434J1... 600 e-170
ref|XM_035119.1| Homo sapiens makorin, ring finger protein,... 600 e-170
ref|NM_013446.1| Homo sapiens makorin, ring finger protein,... 599 e-169
gb|AF192784.1|AF192784 Homo sapiens makorin 1 (MKRN1) mRNA,... 594 e-168
ref|NM_018810.1| Mus musculus makorin, ring finger protein,... 586 e-165
gb|AF192785.1|AF192785 Mus musculus makorin 1 (Mkrn1) mRNA,... 586 e-165
gb|AC108882.1| Homo sapiens chromosome X clone RP11-77G22 m... 546 e-153
ref|NM_030757.1| Homo sapiens makorin, ring finger protein,... 546 e-153
ref|XM_035379.3| Homo sapiens makorin, ring finger protein,... 546 e-153
gb|U41315.1|HSU41315 Human ring zinc-finger protein (ZNF127... 546 e-153
dbj|AK027137.1|AK027137 Homo sapiens cDNA: FLJ23484 fis, cl... 536 e-150
gb|AF277173.1|AF277173 Danio rerio Makorin RING zinc-finger... 526 e-147
gb|AC079598.13|AC079598 Homo sapiens 12q BAC RP11-248E9 (Ro... 325 e-135
ref|XM_090288.1| Homo sapiens similar to makorin, ring fing... 460 e-127
emb|AL359740.24|AL359740 Human DNA sequence from clone RP13... 433 e-127
gb|U41316.1|HSU41316 Human ZNF127-Xq pseudogene 432 e-127
gb|BC003329.1|BC003329 Mus musculus, Similar to makorin, ri... 409 e-112
gb|AF117233.1|AF117233 Homo sapiens znf-xp protein mRNA, co... 406 e-111
dbj|AK005137.1|AK005137 Mus musculus adult male cerebellum ... 392 e-107
gb|U19107.1|HSU19107 Homo sapiens ZNF127 (ZNF127) gene, com... 376 e-102
ref|NM_005664.1| Homo sapiens makorin, ring finger protein,... 376 e-102
emb|AL589843.9|AL589843 Human DNA sequence from clone RP11-... 330 3e-90
gb|AC027298.20|AC027298 Mus musculus 7 BAC RP23-266F22 (Ros... 335 4e-90
gb|U19106.1|MMU19106 Mus domesticus ZNF127 (znf127) gene, c... 335 7e-90
ref|NM_011746.1| Mus musculus zinc finger protein 127 (Zfp1... 335 7e-90
gb|AF277172.1|AF277172 Danio rerio Makorin RING zinc-finger... 299 4e-79
gb|AF439559.1|AF439559 Gallus gallus makorin-2 (MKRN2) mRNA... 287 1e-75
dbj|AK011295.1|AK011295 Mus musculus 10 days embryo whole b... 285 8e-75
ref|NM_023290.1| Mus musculus makorin, ring finger protein,... 283 2e-74
gb|AF277171.1|AF277171 Mus musculus Makorin RING zinc-finge... 283 2e-74
gb|BC001799.1|BC001799 Homo sapiens, clone IMAGE:3354600, m... 283 3e-74
gb|BC015715.1|BC015715 Homo sapiens, clone MGC:16931 IMAGE:... 283 3e-74
ref|XM_051580.2| Homo sapiens makorin, ring finger protein,... 283 3e-74
gb|AF161555.2|AF161555 Homo sapiens HSPC070 mRNA, complete cds 281 9e-74
ref|NM_014160.2| Homo sapiens HSPC070 protein (HSPC070), mRNA 281 9e-74
gb|AF302084.1|AF302084 Homo sapiens MAKORIN2 (MKRN2) mRNA, ... 281 1e-73
dbj|AB049438.1|AB049438 Seriola quinqueradiata YGHL2 mRNA f... 279 5e-73
dbj|AB078011.1|AB078011 Seriola quinqueradiata mRNA for Mak... 279 5e-73
dbj|AB049436.1|AB049436 Seriola quinqueradiata YGHL2 mRNA f... 279 5e-73
dbj|AB049437.1|AB049437 Seriola quinqueradiata YGHL2 mRNA f... 279 5e-73
dbj|AB049439.1|AB049439 Seriola quinqueradiata YGHL2 mRNA f... 279 5e-73
dbj|D85881.2|SEQPYGHL2B Seriola quinqueradiata GHL2 mRNA fo... 279 5e-73
dbj|AB032769.1|AB032769 Seriola quinqueradiata mRNA for zin... 279 5e-73
ref|XM_060890.1| Homo sapiens similar to makorin, ring fing... 265 5e-69
ref|XM_071121.1| Homo sapiens similar to makorin, ring fing... 264 2e-68
dbj|AK009515.1|AK009515 Mus musculus adult male tongue cDNA... 258 5e-68
emb|AL031686.2|HS981L23 Human DNA sequence from clone RP5-9... 179 2e-67
ref|XM_060891.2| Homo sapiens similar to makorin, ring fing... 247 1e-63
ref|NM_079965.1| Drosophila melanogaster Makorin 1 (Mkrn1),... 228 7e-58
gb|AY058694.1| Drosophila melanogaster LD41384 full length ... 228 7e-58
gb|AF192788.1|AF192788 Drosophila melanogaster makorin 1 (M... 228 1e-57
gb|AC008334.7|AC008334 Drosophila melanogaster, chromosome ... 216 5e-54
gb|AE003496.2|AE003496 Drosophila melanogaster genomic scaf... 216 5e-54
ref|NM_067619.1| Caenorhabditis elegans 212 5e-53
gb|BC012398.1|BC012398 Homo sapiens, clone MGC:8769 IMAGE:3... 190 2e-46
gb|AY070366.1| Arabidopsis thaliana unknown protein (At3g08... 172 5e-41
dbj|AK024987.1|AK024987 Homo sapiens cDNA: FLJ21334 fis, cl... 157 2e-36
gb|AC069335.17| Homo sapiens BAC clone RP11-723C11 from 7, ... 154 2e-35
gb|AF192792.1|AF192789S4 Homo sapiens makorin 1 (MKRN1) gen... 154 2e-35
gb|AC010701.3| Drosophila melanogaster 3L BAC RP98-26P10 (R... 152 5e-35
gb|AE003594.1|AE003594 Drosophila melanogaster genomic scaf... 152 5e-35
gb|AF192794.1|AF192794 Drosophila melanogaster makorin 1 (M... 152 8e-35
gb|AF198100.1|AF198100 Fowlpox virus, complete genome 137 3e-30
gb|AC074395.1|AC074395 Arabidopsis thaliana chromosome 3 BA... 131 1e-28
gb|AE003519.2|AE003519 Drosophila melanogaster genomic scaf... 130 2e-28
gb|AC009380.5| Drosophila melanogaster 3L BAC RP98-17L5 (Ro... 130 2e-28
gb|AC009372.5| Drosophila melanogaster 3L BAC RP98-48N4 (Ro... 130 2e-28
dbj|AK004225.1|AK004225 Mus musculus 18 days embryo whole b... 109 1e-24
ref|XM_069496.1| Homo sapiens similar to dJ109F14.3 (PUTATI... 117 2e-24
gb|AF375654.1|AF375654 Ateles belzebuth chamek makorin 3 (M... 112 7e-23
gb|AF192791.1|AF192789S3 Homo sapiens makorin 1 (MKRN1) gen... 110 2e-22
gb|AF277168.1|AF277164S5 Homo sapiens Makorin RING zinc-fin... 108 1e-21
gb|AC018500.3|AC018500 Homo sapiens chromosome 3 clone RP11... 108 1e-21
gb|AC026170.4|AC026170 Homo sapiens chromosome 3 clone RP11... 108 1e-21
gb|AC009969.10| Homo sapiens BAC clone RP11-418G17 from 2, ... 87 6e-21
dbj|AB078012.1|AB078012 Seriola quinqueradiata mRNA for Mak... 81 4e-20
ref|XM_092695.1| Homo sapiens similar to kruppel-related zi... 102 8e-20
gb|AC024826.1| Caenorhabditis elegans cosmid Y55F3AM, compl... 101 1e-19
dbj|AB047517.1|AB047517 Seriola quinqueradiata gene for zin... 90 5e-16
gb|AF192793.1|AF192789S5 Homo sapiens makorin 1 (MKRN1) gen... 89 7e-16
gb|AC055733.16| Homo sapiens 3 BAC RP11-39E3 (Roswell Park ... 56 2e-14
gb|AF192790.1|AF192789S2 Homo sapiens makorin 1 (MKRN1) gen... 84 3e-14
dbj|AB033379.1|AB033379 Seriola quinqueradiata YGHLC3HC4 ge... 84 3e-14
emb|AL022721.1|HS109F14 Human DNA sequence from clone 109F1... 64 5e-13
gb|AF277167.1|AF277164S4 Homo sapiens Makorin RING zinc-fin... 77 4e-12
ref|XM_093717.1| Homo sapiens similar to interleukin-1 rece... 75 1e-11
gb|AF277165.1|AF277164S2 Homo sapiens Makorin RING zinc-fin... 75 1e-11
gb|AF410153.1| Swinepox virus isolate 17077-99, complete ge... 68 2e-09
emb|AJ293568.1|YDI293568 Yaba-like disease virus (YLDV), co... 68 2e-09
gb|AF277170.1|AF277164S7 Homo sapiens Makorin RING zinc-fin... 67 4e-09
gb|AF380138.1|AF380138 Monkeypox virus strain Zaire-96-I-16... 67 5e-09
emb|Y16780.1|VMVY16780 variola minor virus complete genome 65 1e-08
emb|X69198.1|VVCGAA Variola virus DNA complete genome 65 1e-08
gb|AF438165.1| Camelpox virus isolate M-96 from Kazakhstan,... 65 1e-08
gb|U18338.1|VVU18338 Variola virus Garcia-1966 left near-te... 65 1e-08
emb|X94355.1|CV41KBPL Cowpox virus 41kbp fragment from left... 65 1e-08
gb|U18337.1|VVU18337 Variola virus Congo-1965 left near-ter... 65 1e-08
emb|Y11842.1|CVGRI90 Cowpox virus strain GRI-90 DNA (52 kb ... 65 1e-08
gb|L22579.1|VARCG Variola major virus (strain Bangladesh-19... 65 1e-08
gb|U01161.1|U01161 Ectromelia virus Moscow p42 gene, partia... 65 1e-08
gb|U18340.1|VVU18340 Variola virus Somalia-1977 left variab... 65 2e-08
dbj|AB025319.1|AB025319 Yaba monkey tumor virus DNA, BamH1 ... 64 2e-08
emb|Z99260.2|SPAC3A11 S.pombe chromosome I cosmid c3A11 62 9e-08
dbj|AB017490.1|AB017490 Schizosaccharomyces pombe DNA for 2... 62 9e-08
gb|AF325528.1|AF325528 Lumpy skin disease virus isolate Nee... 57 4e-06
gb|AF264786.1|AF264786 Pichia angusta Mnn9p (MNN9) gene, co... 56 6e-06
ref|XM_028253.1| Homo sapiens chromosome 19 open reading fr... 56 8e-06
dbj|AB028987.1|AB028987 Homo sapiens mRNA for KIAA1064 prot... 56 8e-06
gb|AC022344.2|AC022344 Drosophila melanogaster, chromosome ... 56 8e-06
ref|NM_020594.1| Mus musculus fetal liver zinc finger 1 (Fl... 55 1e-05
gb|AF061961.1|AF061961 Mus musculus putative zinc finger pr... 55 1e-05
emb|AL031538.1|SPCC1906 S.pombe chromosome III cosmid c1906 54 2e-05
gb|AF170722.1|AF170722 Rabbit fibroma virus, complete genome 54 3e-05
gb|L26342.1|RBFN1RAAA Rabbit fibroma virus N1R gene, comple... 54 3e-05
gb|AF170726.2| Myxoma virus strain Lausanne, complete genome 54 4e-05
ref|XM_091691.1| Homo sapiens LOC147234 (LOC147234), mRNA 54 4e-05
ref|NM_032494.1| Homo sapiens zinc finger protein (LOC84524... 53 5e-05
gb|AF334161.1|AF334161 Homo sapiens zinc finger protein mRN... 53 5e-05
ref|XM_046053.3| Homo sapiens zinc finger protein (LOC84524... 53 7e-05
gb|M22812.1|VACLEND Vaccinia virus genome, left end 42 4e-04
ref|NM_125075.1| unknown protein 50 4e-04
gb|U39205.1|SCU39205 Saccharomyces cerevisiae chromosome XV... 49 0.001
ref|NM_125268.1| Expressed protein 49 0.001
emb|X86735.1|SCLEE1GE S.cerevisiae LEE1 gene 49 0.001
gb|U94848.1|U94848 Vaccinia virus strain Ankara, complete g... 43 0.001
gb|U70479.1|DRU70479 Danio rerio no arches (nar) mRNA, comp... 48 0.002
ref|NM_120230.1| putative protein 48 0.002
ref|NM_114579.1| putative RNA-binding protein 48 0.002
gb|AY050835.1| Arabidopsis thaliana putative C3HC4 type Zin... 48 0.002
gb|U26549.1|DMU26549 Drosophila melanogaster zinc finger pr... 47 0.003
gb|AC092222.1|AC092222 Drosophila melanogaster, chromosome ... 46 0.006
gb|AC004546.1|AC004546 Drosophila melanogaster DNA sequence... 46 0.006
gb|AE003588.2|AE003588 Drosophila melanogaster genomic scaf... 46 0.006
ref|NM_057808.1| Drosophila melanogaster Clipper (Clp), tra... 46 0.006
ref|NG_000517.1| Drosophila melanogaster Clipper (Clp) on c... 46 0.006
ref|NM_069034.1| Caenorhabditis elegans 45 0.011
ref|NM_006693.1| Homo sapiens cleavage and polyadenylation ... 45 0.019
gb|U79569.1|HSU79569 Human no arches (nar) mRNA, complete cds 45 0.019
gb|AF033201.1|AF033201 Mus musculus clipper/cleavage and po... 45 0.019
gb|U96448.1|BTU96448 Bos taurus cleavage and polyadenylatio... 45 0.019
gb|BC003101.1|BC003101 Homo sapiens, Similar to cleavage an... 45 0.019
emb|Y17326.1|RNY17326 Rattus norvegicus CDK106 mRNA 45 0.019
ref|NM_114583.1| RNA-binding protein-like protein 45 0.019
gb|U32445.1|YSCP8283 Saccharomyces cerevisiae chromosome XV... 44 0.025
gb|AC005770.2|AC005770 Arabidopsis thaliana chromosome II s... 44 0.025
gb|AY065197.1| Arabidopsis thaliana putative RING zinc fing... 44 0.025
ref|NM_129467.1| putative RING zinc finger protein 44 0.025
dbj|D63484.1|D63484 Human mRNA for KIAA0150 gene, partial cds 44 0.032
ref|XM_055745.1| Homo sapiens similar to KIAA0150 protein (... 44 0.032
gb|BC001974.1|BC001974 Homo sapiens, clone IMAGE:3457069, m... 44 0.032
ref|NM_101190.1| Expressed protein 44 0.032
ref|XM_049226.3| Homo sapiens KIAA0150 protein (KIAA0150), ... 44 0.032
gb|AF180293.1|AF180293 Medicago truncatula MTD2 mRNA, compl... 44 0.032
ref|NM_102782.1| hypothetical protein 43 0.055
gb|AC000103.2|AC000103 Genomic sequence for Arabidopsis tha... 43 0.072
ref|NM_102289.1| expressed protein 43 0.072
ref|NM_114703.1| putative protein 42 0.093
emb|Z68297.1|CEF11A10 Caenorhabditis elegans cosmid F11A10,... 42 0.12
ref|NM_069892.1| Zinc finger, C3HC4 type (RING finger) 42 0.12
gb|AC008755.7| Homo sapiens chromosome 19 clone CTD-3026N16... 42 0.16
ref|NM_121860.1| zinc finger -like protein 42 0.16
gb|U46674.1|CELT26A8 Caenorhabditis elegans cosmid T26A8 42 0.16
ref|NM_117163.1| putative RING finger protein 42 0.16
emb|AL133156.1|SPAC227 S.pombe chromosome I cosmid c227 41 0.21
ref|NM_125721.1| putative protein 41 0.21
gb|AC092645.2| Homo sapiens chromosome 2 clone RP11-399B17,... 41 0.27
gb|AY048253.1| Arabidopsis thaliana At1g04990/F13M7_1 mRNA,... 40 0.35
gb|U20660.1|DVU20660 Drosophila virilis suppressor of sable... 40 0.35
gb|AC009917.2|F26G16 Arabidopsis thaliana chromosome 1 BAC ... 40 0.35
ref|NM_100378.1| zinc finger protein 2, putative 40 0.35
gb|AC007085.7|AC007085 Drosophila melanogaster, chromosome ... 40 0.46
gb|BC016190.1|BC016190 Mus musculus, Similar to RIKEN cDNA ... 40 0.46
emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome... 40 0.46
ref|XM_080734.1| CG8635, mRNA 40 0.46
ref|NM_130352.1| unknown protein 40 0.46
ref|NM_058865.1| zinc finger protein 40 0.46
gb|AY060945.1| Drosophila melanogaster GM08440 full length ... 40 0.46
ref|NM_120673.1| unknown protein 40 0.46
dbj|AB017060.1|AB017060 Arabidopsis thaliana genomic DNA, c... 40 0.46
gb|AE003836.2|AE003836 Drosophila melanogaster genomic scaf... 40 0.46
gb|AF277169.1|AF277164S6 Homo sapiens Makorin RING zinc-fin... 40 0.46
dbj|AK005072.1|AK005072 Mus musculus adult male cerebellum ... 40 0.46
ref|NM_128853.1| expressed protein 40 0.61
gb|AF138744.1|AF138744 Arabidopsis thaliana zinc finger pro... 40 0.61
gb|AF457920.1|AF457920 Paxillus involutus genomic sequence 40 0.61
gb|AF462812.1|AF462812 Arabidopsis thaliana AT5g19430/F7K24... 40 0.61
ref|NM_111516.1| hypothetical protein 40 0.61
ref|NM_121269.1| RING finger-like protein 40 0.61
gb|AF265664.1|AF265664 Solanum tuberosum resistance gene cl... 39 0.79
ref|NG_000598.1| Drosophila melanogaster Death related ced-... 39 0.79
gb|AY071563.1| Drosophila melanogaster RE63043 full length ... 39 0.79
gb|AF361602.1| Arabidopsis thaliana AT5g19430/F7K24_180 mRN... 39 0.79
ref|NM_121948.1| putative protein 39 0.79
emb|AL031581.1|DMC115C2 Drosophila melanogaster cosmid clon... 39 0.79
ref|NG_000180.1| Drosophila melanogaster suppressor of sabl... 39 0.79
ref|NM_057406.1| Drosophila melanogaster suppressor of sabl... 39 0.79
gb|M57889.1|DROSUSG Drosophila melanogaster suppressor of s... 39 0.79
gb|AE003418.1|AE003418 Drosophila melanogaster genomic scaf... 39 0.79
emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Enc... 39 0.79
gb|AC104602.3| Drosophila melanogaster X BAC RP98-16G6 (Ros... 39 0.79
gb|AY058228.1| Arabidopsis thaliana AT5g19430/F7K24_180 mRN... 39 0.79
ref|NM_023835.1| Mus musculus tripartite motif protein 12 (... 39 1.0
gb|AY070452.1| Arabidopsis thaliana putative protein with C... 39 1.0
gb|AF220126.1|AF220126 Mus musculus tripartite motif protei... 39 1.0
emb|AL133625.1|HSM801492 Homo sapiens mRNA; cDNA DKFZp434G2... 39 1.3
ref|NM_018388.1| Homo sapiens hypothetical protein FLJ11316... 39 1.3
dbj|AK002178.1|AK002178 Homo sapiens cDNA FLJ11316 fis, clo... 39 1.3
dbj|AB029316.1|AB029316 Homo sapiens mRNA for ring-IBR-ring... 38 1.8
ref|XM_015243.2| Homo sapiens tripartite motif-containing 2... 38 1.8
gb|BC022281.1| Homo sapiens, clone IMAGE:4718024, mRNA 38 1.8
emb|AL161946.1|ATF7A7 Arabidopsis thaliana DNA chromosome 5... 38 1.8
gb|BC012336.1|BC012336 Homo sapiens, clone IMAGE:3533528, mRNA 38 1.8
ref|XM_042050.2| Homo sapiens double ring-finger protein, D... 38 1.8
gb|AF289586.1|AF289586 Homo sapiens clone pp730 unknown mRNA 38 1.8
gb|AF071560.1|AF071560 Mus musculus XYbp protein (XYbp) gen... 38 1.8
ref|NM_013923.1| Mus musculus ring finger protein (C3HC4 ty... 38 1.8
gb|AF120207.1|AF120207 Mus musculus XY body protein (Xybp) ... 38 1.8
gb|AF120206.1|AF120206 Mus musculus XY body protein (Xybp) ... 38 1.8
gb|AF360999.1|AF360999 Mus musculus UbcM4-interacting prote... 38 1.8
ref|NM_006074.2| Homo sapiens tripartite motif-containing 2... 38 1.8
emb|AL360187.1|HST000229 Homo sapiens mRNA full length inse... 38 1.8
dbj|AK005661.1|AK005661 Mus musculus adult male testis cDNA... 38 1.8
ref|XM_045131.1| Homo sapiens uncharacterized hypothalamus ... 38 1.8
ref|NM_064768.1| zinc finger protein 38 1.8
ref|NM_018471.1| Homo sapiens uncharacterized hypothalamus ... 38 1.8
gb|AF161421.1|AF161421 Homo sapiens HSPC303 mRNA, partial cds 38 1.8
gb|AF220184.1|AF220184 Homo sapiens uncharacterized hypotha... 38 1.8
dbj|AK012012.1|AK012012 Mus musculus 10 days embryo whole b... 38 1.8
gb|AC018867.5| Homo sapiens BAC clone RP11-66C4 from 2, com... 38 1.8
emb|X82200.1|HSSTAF50 H.sapiens Staf50 mRNA 38 1.8
gb|BC021102.1|BC021102 Homo sapiens, clone MGC:31837 IMAGE:... 38 1.8
dbj|AP001574.3|AP001574 Homo sapiens genomic DNA, chromosom... 38 1.8
dbj|AB020755.1|AB020755 Arabidopsis thaliana genomic DNA, c... 38 2.3
dbj|AK001901.1|AK001901 Homo sapiens cDNA FLJ11039 fis, clo... 38 2.3
ref|NM_121282.1| putative protein 38 2.3
ref|NM_130336.1| putative ATP-dependent RNA helicase A 38 2.3
gb|AF099919.1| Caenorhabditis elegans cosmid F40G9, complet... 38 2.3
emb|Z36749.1|GMZINCF G.max (Evans) mRNA for zinc-finger pro... 38 2.3
emb|AJ002241.1|MMMMS24 Mus musculus minisatellite tandem re... 38 2.3
emb|AL592312.1|ATT2L20 Arabidopsis thaliana DNA chromosome ... 38 2.3
gb|AC093909.2| Homo sapiens BAC clone RP11-756P10 from 4, c... 38 2.3
emb|AL391737.1|CNS06C8G chromosome I of strain GB-M1 of Enc... 37 3.0
ref|NM_124134.1| putative protein 37 3.0
emb|AL031854.1|SPBC337 S.pombe chromosome II cosmid c337 37 3.0
dbj|AB025628.1|AB025628 Arabidopsis thaliana genomic DNA, c... 37 3.0
dbj|AB024035.1|AB024035 Arabidopsis thaliana genomic DNA, c... 37 3.0
emb|AL596272.1|LMFL1994U Leishmania major Friedlin cosmid L... 37 3.0
gb|L04190.1|SMRPWA33A Pleurodeles waltlii Zn-binding protei... 37 3.0
gb|AC084389.1| Mus musculus clone RP23-247A1, complete sequ... 37 3.9
gb|AE003407.1|DROSADH01 Drosophila melanogaster, chromosome... 37 3.9
gb|BC018198.1|BC018198 Homo sapiens, peroxisome biogenesis ... 37 3.9
ref|NM_015435.1| Homo sapiens double ring-finger protein, D... 37 3.9
dbj|AK001774.1|AK001774 Homo sapiens cDNA FLJ10912 fis, clo... 37 3.9
ref|NM_113648.1| hypothetical protein 37 3.9
gb|AE003641.1|AE003641 Drosophila melanogaster genomic scaf... 37 3.9
dbj|AK026473.1|AK026473 Homo sapiens cDNA: FLJ22820 fis, cl... 37 3.9
gb|AC023628.3|AC023628 Arabidopsis thaliana chromosome I BA... 37 3.9
dbj|AB013818.1|AB013818 Homo sapiens PEX10 mRNA for peroxis... 37 3.9
ref|XM_049820.3| Homo sapiens peroxisome biogenesis factor ... 37 3.9
gb|AY043265.1| Epiphyas postvittana nucleopolyhedrovirus, c... 37 3.9
dbj|AK009769.1|AK009769 Mus musculus adult male tongue cDNA... 37 3.9
gb|BC000543.1|BC000543 Homo sapiens, Similar to peroxisome ... 37 3.9
ref|NM_002617.1| Homo sapiens peroxisome biogenesis factor ... 37 3.9
gb|AF060502.1|AF060502 Homo sapiens peroxisome assembly pro... 37 3.9
gb|AC092236.1|AC092236 Drosophila melanogaster, chromosome ... 37 3.9
gb|AE003555.2|AE003555 Drosophila melanogaster genomic scaf... 37 5.1
emb|AL669998.1|NCB1K11 Neurospora crassa DNA linkage group ... 37 5.1
ref|NM_103813.1| RING-H2 finger protein RHA3a, putative 37 5.1
gb|AC003033.2|AC003033 Arabidopsis thaliana chromosome II s... 37 5.1
emb|AL109652.1|SPBC17A3 S.pombe chromosome II cosmid c17A3 37 5.1
ref|NM_112103.1| hypothetical protein 37 5.1
gb|AY024357.1| Arabidopsis thaliana floral homeotic protein... 37 5.1
gb|AC010019.4| Drosophila melanogaster 3L BAC RP98-6F6 (Ros... 37 5.1
gb|AC016041.5|AC016041 Genomic sequence for Arabidopsis tha... 37 5.1
emb|AL590446.1|CNS07EGD chromosome VI of strain GB-M1 of En... 37 5.1
dbj|AB004537.1|AB004537 Schizosaccharomyces pombe 37 kb gen... 37 5.1
gb|AC010041.6| Drosophila melanogaster 3L BAC RP98-13D12 (R... 37 5.1
gb|AC005960.1|AC005960 Mus musculus chromosome 17 BAC citb2... 36 6.7
ref|NM_116589.1| RMA1 RING zinc finger protein 36 6.7
dbj|AB008518.1|AB008518 Arabidopsis thaliana RMA1 mRNA, com... 36 6.7
dbj|AB018422.1|AB018422 Pisum sativum mRNA for DNA binding ... 36 6.7
emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome... 36 6.7
ref|NM_024778.1| Homo sapiens hypothetical protein FLJ22612... 36 6.7
dbj|AK026265.1|AK026265 Homo sapiens cDNA: FLJ22612 fis, cl... 36 6.7
gb|AF071527.1|AF071527 Arabidopsis thaliana BAC F9H3, from ... 36 6.7
emb|Z36750.1|LJRINGP L.japonicus (Gifu B-129) mRNA for RING... 36 6.7
emb|AL132986.4|CNS01DTU Human chromosome 14 DNA sequence BA... 36 8.7
ref|NM_011633.1| Mus musculus Tnf receptor-associated facto... 36 8.7
emb|AL050310.6|HSJ842K24 Human DNA sequence from clone RP5-... 36 8.7
dbj|D78141.1|MUSCRDA Mouse mRNA for TRAF5 protein, complete... 36 8.7
ref|NM_017172.1| Rattus norvegicus butyrate response factor... 36 8.7
gb|BC012702.1|BC012702 Mus musculus, Similar to Tnf recepto... 36 8.7
emb|X52590.1|RNCMG1 Rat cMG1 mRNA 36 8.7
emb|X79067.1|HSERF13 H.sapiens ERF-1 mRNA 3' end 36 8.7
gb|BC018340.1|BC018340 Homo sapiens, clone MGC:9372 IMAGE:3... 36 8.7
ref|NM_004926.2| Homo sapiens zinc finger protein 36, C3H t... 36 8.7
gb|AE001395.1|AE001395 Plasmodium falciparum chromosome 2, ... 36 8.7
emb|X99404.1|HSBERG36 H.sapiens mRNA for early response gen... 36 8.7
gb|AC000015.2|AC000015 Homo sapiens chromosome 4 clone B271... 36 8.7
gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F... 36 8.7
gb|AF138872.1|AF138872 Arabidopsis thaliana zinc finger pro... 36 8.7
gb|AC026682.14|AC026682 Mus musculus 11 BAC RP23-201K2 (Ros... 36 8.7
dbj|D83528.1|D83528 Mus musculus mRNA for TRAF5, complete cds 36 8.7
ref|NM_007564.1| Mus musculus zinc finger protein 36, C3H t... 36 8.7
gb|BC017851.1|BC017851 Homo sapiens, clone IMAGE:4689315, m... 36 8.7
gb|U51033.1|YSCP9513 Saccharomyces cerevisiae chromosome XV... 36 8.7
gb|M58566.1|MUSTIS11B Mouse TIS11 primary response gene, co... 36 8.7
dbj|AK024202.1|AK024202 Homo sapiens cDNA FLJ14140 fis, clo... 36 8.7
gb|AC084878.12|AC084878 Homo sapiens 12q BAC RP11-101K23 (R... 36 8.7
gb|AC025907.2|AC025907 Oryza sativa chromosome 10 clone nbx... 36 8.7
>gb|AF192787.1|AF192787 Gallus gallus makorin 1 (MKRN1) mRNA, complete cds
Length = 2739
Score = 719 bits (1855), Expect = 0.0
Identities = 344/426 (80%), Positives = 344/426 (80%)
Frame = +2
Query: 28 TGTIFXXXXXXXXXXXXXXXWTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQ 87
TGTIF WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQ
Sbjct: 83 TGTIFGPAAVPPLALGPGGGWTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQ 262
Query: 88 RGCCAYGDHCRYEHTKPLMQEEELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLA 147
RGCCAYGDHCRYEHTKPLMQEEELTTVNPAAKTYPSDLALLPETV LA
Sbjct: 263 RGCCAYGDHCRYEHTKPLMQEEELTTVNPAAKTYPSDLALLPETVEEDIIEIEDENIDLA 442
Query: 148 AAGVGAEDWVNAVEFVPGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYA 207
AAGVGAEDWVNAVEFVPGQPYCGRAAPSCT MKKQLCPYA
Sbjct: 443 AAGVGAEDWVNAVEFVPGQPYCGRAAPSCTEVPLEEMVIEEEYEKQEADEEMKKQLCPYA 622
Query: 208 AVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSK 267
AVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSK
Sbjct: 623 AVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSK 802
Query: 268 DMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRIT 327
DMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRIT
Sbjct: 803 DMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRIT 982
Query: 328 SNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQ 387
SNFVIPSEYWV AMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQ
Sbjct: 983 SNFVIPSEYWVEEKEEKQKLIQKYKEAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQ 1162
Query: 388 EEPQRPKAQRRNRFWEFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSED 447
EEPQRPKAQRRNRFWEFIEERENGDPFETDEDEVVTF TDSED
Sbjct: 1163EEPQRPKAQRRNRFWEFIEERENGDPFETDEDEVVTFELGEMLLMLLAAGGDDELTDSED 1342
Query: 448 EWDLFH 453
EWDLFH
Sbjct: 1343EWDLFH 1360
>gb|AF192786.1|AF192786 Macropus eugenii makorin 1 (MKRN1) mRNA, complete cds
Length = 1861
Score = 627 bits (1616), Expect = e-178
Identities = 304/421 (72%), Positives = 316/421 (74%), Gaps = 15/421 (3%)
Frame = +2
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQVTCRYFMHGVCK+G+NCRYSHDLST QSAMVCRYYQRGCCAYGD CRYEHTKPL +
Sbjct: 341 WTKQVTCRYFMHGVCKKGNNCRYSHDLSTSQSAMVCRYYQRGCCAYGDRCRYEHTKPL-K 517
Query: 108 EEELTTVNPAAKTYPSDL-------ALLPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAV 160
EE+T N AAK SDL AL+ AAAG G EDWVNA+
Sbjct: 518 REEVTAANLAAK---SDLPASSSLPALVEPLAEVSTGEAESVNSNFAAAGAGGEDWVNAI 688
Query: 161 EFVPGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVY 220
EFVPGQPYCGRAAPSCT MKKQLCPYAAVGECRYGENCVY
Sbjct: 689 EFVPGQPYCGRAAPSCTEAPLQGMVIEEELEKQQTNVEMKKQLCPYAAVGECRYGENCVY 868
Query: 221 IHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYE 280
+HGD CDMCGLQVLHP+DAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYE
Sbjct: 869 LHGDACDMCGLQVLHPVDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYE 1048
Query: 281 KANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXX 340
KANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWV
Sbjct: 1049KANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEE 1228
Query: 341 XXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPK------ 394
AMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGR+EEPQR K
Sbjct: 1229KEEKQKLIQKYKEAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQKVGTSNR 1408
Query: 395 --AQRRNRFWEFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLF 452
AQRRNRFWE IEERE+ +PF+ DEDEVVTF TD EDEWDLF
Sbjct: 1409YRAQRRNRFWELIEERESSNPFDNDEDEVVTFELGEMLLMLLAAGGDDDLTDPEDEWDLF 1588
Query: 453 H 453
H
Sbjct: 1589H 1591
>emb|AL136812.1|HSM801780 Homo sapiens mRNA; cDNA DKFZp434J1822 (from clone DKFZp434J1822);
complete cds
Length = 3046
Score = 600 bits (1547), Expect = e-170
Identities = 289/418 (69%), Positives = 307/418 (73%), Gaps = 12/418 (2%)
Frame = +1
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQVTCRYFMHGVCKEGDNCRYSHDLS ++VC+Y+QRG C YGD CRYEH+KPL Q
Sbjct: 286 WTKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHSKPLKQ 465
Query: 108 EE----ELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFV 163
EE ELTT + A + S +++ V A G G+EDWVNA+EFV
Sbjct: 466 EEATATELTTKSSLAAS-SSLSSIVGPLVEMNTGEAESRNSNFATVGAGSEDWVNAIEFV 642
Query: 164 PGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHG 223
PGQPYCGR APSCT KKQLCPYAAVGECRYGENCVY+HG
Sbjct: 643 PGQPYCGRTAPSCTEAPLQGSVTKEESEKEQTAVETKKQLCPYAAVGECRYGENCVYLHG 822
Query: 224 DVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN 283
D CDMCGLQVLHP+DAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN
Sbjct: 823 DSCDMCGLQVLHPMDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN 1002
Query: 284 PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXX 343
PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWV
Sbjct: 1003PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEEKEE 1182
Query: 344 XXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPK--------A 395
AMSNK CRYFDEGRGSCPFGGNCFYKHAYPDGR+EEPQR K A
Sbjct: 1183KQKLILKYKEAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQKVGTSSRYRA 1362
Query: 396 QRRNRFWEFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLFH 453
QRRN FWE IEEREN +PF+ DE+EVVTF TDSEDEWDLFH
Sbjct: 1363QRRNHFWELIEERENSNPFDNDEEEVVTFELGEMLLMLLAAGGDDELTDSEDEWDLFH 1536
>ref|XM_035119.1| Homo sapiens makorin, ring finger protein, 1 (MKRN1), mRNA
Length = 3028
Score = 600 bits (1547), Expect = e-170
Identities = 289/418 (69%), Positives = 307/418 (73%), Gaps = 12/418 (2%)
Frame = +3
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQVTCRYFMHGVCKEGDNCRYSHDLS ++VC+Y+QRG C YGD CRYEH+KPL Q
Sbjct: 285 WTKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHSKPLKQ 464
Query: 108 EE----ELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFV 163
EE ELTT + A + S +++ V A G G+EDWVNA+EFV
Sbjct: 465 EEATATELTTKSSLAAS-SSLSSIVGPLVEMNTGEAESRNSNFATVGAGSEDWVNAIEFV 641
Query: 164 PGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHG 223
PGQPYCGR APSCT KKQLCPYAAVGECRYGENCVY+HG
Sbjct: 642 PGQPYCGRTAPSCTEAPLQGSVTKEESEKEQTAVETKKQLCPYAAVGECRYGENCVYLHG 821
Query: 224 DVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN 283
D CDMCGLQVLHP+DAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN
Sbjct: 822 DSCDMCGLQVLHPMDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN 1001
Query: 284 PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXX 343
PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWV
Sbjct: 1002PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEEKEE 1181
Query: 344 XXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPK--------A 395
AMSNK CRYFDEGRGSCPFGGNCFYKHAYPDGR+EEPQR K A
Sbjct: 1182KQKLILKYKEAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQKVGTSSRYRA 1361
Query: 396 QRRNRFWEFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLFH 453
QRRN FWE IEEREN +PF+ DE+EVVTF TDSEDEWDLFH
Sbjct: 1362QRRNHFWELIEERENSNPFDNDEEEVVTFELGEMLLMLLAAGGDDELTDSEDEWDLFH 1535
>ref|NM_013446.1| Homo sapiens makorin, ring finger protein, 1 (MKRN1), mRNA
Length = 3029
Score = 599 bits (1544), Expect = e-169
Identities = 288/418 (68%), Positives = 307/418 (72%), Gaps = 12/418 (2%)
Frame = +3
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQVTCRYFMHGVCKEGDNCRYSHDLS ++VC+Y+QRG C YGD CRYEH+KPL Q
Sbjct: 285 WTKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHSKPLKQ 464
Query: 108 EE----ELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFV 163
EE ELTT + A + S +++ V A G G+EDWVNA+EFV
Sbjct: 465 EEATATELTTKSSLAAS-SSLSSIVGPLVEMNTGEAESRNSNFATVGAGSEDWVNAIEFV 641
Query: 164 PGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHG 223
PGQPYCGR APSCT KKQLCPYAAVGECRYGENCVY+HG
Sbjct: 642 PGQPYCGRTAPSCTEAPLQGSVTKEESEKEQTAVETKKQLCPYAAVGECRYGENCVYLHG 821
Query: 224 DVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN 283
D CDMCGLQ+LHP+DAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN
Sbjct: 822 DSCDMCGLQLLHPMDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN 1001
Query: 284 PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXX 343
PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWV
Sbjct: 1002PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEEKEE 1181
Query: 344 XXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPK--------A 395
AMSNK CRYFDEGRGSCPFGGNCFYKHAYPDGR+EEPQR K A
Sbjct: 1182KQKLILKYKEAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQKVGTSSRYRA 1361
Query: 396 QRRNRFWEFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLFH 453
QRRN FWE IEEREN +PF+ DE+EVVTF TDSEDEWDLFH
Sbjct: 1362QRRNHFWELIEERENSNPFDNDEEEVVTFELGEMLLMLLAAGGDDELTDSEDEWDLFH 1535
>gb|AF192784.1|AF192784 Homo sapiens makorin 1 (MKRN1) mRNA, complete cds
Length = 3025
Score = 594 bits (1531), Expect = e-168
Identities = 286/418 (68%), Positives = 305/418 (72%), Gaps = 12/418 (2%)
Frame = +1
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQVTCRYFMHGVCKEGDNCRYSHDLS ++VC+Y+QRG C YGD CRYEH+KPL Q
Sbjct: 283 WTKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHSKPLKQ 462
Query: 108 EE----ELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFV 163
EE ELTT + A + S +++ V A G G+EDWVNA+EFV
Sbjct: 463 EEATATELTTKSSLAAS-SSLSSIVGPLVEMNTGEAESRNSNFATVGAGSEDWVNAIEFV 639
Query: 164 PGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHG 223
PGQPYCGR APSCT KKQLCPYAAVGECRYGENCVY+HG
Sbjct: 640 PGQPYCGRTAPSCTEAPLQGSVTKEESEKEQTAVETKKQLCPYAAVGECRYGENCVYLHG 819
Query: 224 DVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN 283
D CDMCGLQ+LHP+DAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN
Sbjct: 820 DSCDMCGLQLLHPMDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN 999
Query: 284 PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXX 343
PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWV
Sbjct: 1000PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEEKEE 1179
Query: 344 XXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPK--------A 395
AMSNK CRYFDEGRGSCPFGGNCFYKHAYPD +EEPQR K A
Sbjct: 1180KQKLILKYKEAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDAGREEPQRQKVGTSSRYRA 1359
Query: 396 QRRNRFWEFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLFH 453
QRRN FWE IEEREN +PF+ DE+EVVTF TDSEDEWDLFH
Sbjct: 1360QRRNHFWELIEERENSNPFDNDEEEVVTFELGEMLLMLLAAGGDDELTDSEDEWDLFH 1533
>ref|NM_018810.1| Mus musculus makorin, ring finger protein, 1 (Mkrn1), mRNA
Length = 2963
Score = 586 bits (1510), Expect = e-165
Identities = 282/417 (67%), Positives = 300/417 (71%), Gaps = 11/417 (2%)
Frame = +1
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQVTCRYFMHGVCKEGDNCRYSHDLS +VC+Y+QRG C YGD CRYEH+KPL Q
Sbjct: 274 WTKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHSKPLKQ 453
Query: 108 EEELTTVNPAAKTYPSDLAL---LPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFVP 164
EE T A + + +L + G G+EDWVNA+EFVP
Sbjct: 454 EEVTATDLSAKPSLAASSSLSSGVGSLAEMNSGEAESRNPSFPTVGAGSEDWVNAIEFVP 633
Query: 165 GQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHGD 224
GQPYCGR APSCT KKQLCPYAAVGECRYGENCVY+HGD
Sbjct: 634 GQPYCGRTAPSCTEVPPQGSVTKEESEKEPTTVETKKQLCPYAAVGECRYGENCVYLHGD 813
Query: 225 VCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANP 284
CDMCGLQVLHP+DAAQRSQHIKSCIEAHEKDMELSFAVQR+KDMVCGICMEVVYEKANP
Sbjct: 814 SCDMCGLQVLHPVDAAQRSQHIKSCIEAHEKDMELSFAVQRTKDMVCGICMEVVYEKANP 993
Query: 285 SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXXX 344
SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWV
Sbjct: 994 SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEEKEEK 1173
Query: 345 XXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPK--------AQ 396
AMSNK CRYFDEGRGSCPFGGNCFYKHAYPDGR+EEPQR K AQ
Sbjct: 1174QKLIQKYKEAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQKVGTSSRYRAQ 1353
Query: 397 RRNRFWEFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLFH 453
RR+ FWE IEEREN +PF+ DE+EVVTF TDSEDEWDLFH
Sbjct: 1354RRSHFWELIEEREN-NPFDNDEEEVVTFELGEMLLMLLAAGGDDELTDSEDEWDLFH 1521
>gb|AF192785.1|AF192785 Mus musculus makorin 1 (Mkrn1) mRNA, complete cds
Length = 2963
Score = 586 bits (1510), Expect = e-165
Identities = 282/417 (67%), Positives = 300/417 (71%), Gaps = 11/417 (2%)
Frame = +1
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQVTCRYFMHGVCKEGDNCRYSHDLS +VC+Y+QRG C YGD CRYEH+KPL Q
Sbjct: 274 WTKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHSKPLKQ 453
Query: 108 EEELTTVNPAAKTYPSDLAL---LPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFVP 164
EE T A + + +L + G G+EDWVNA+EFVP
Sbjct: 454 EEVTATDLSAKPSLAASSSLSSGVGSLAEMNSGEAESRNPSFPTVGAGSEDWVNAIEFVP 633
Query: 165 GQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHGD 224
GQPYCGR APSCT KKQLCPYAAVGECRYGENCVY+HGD
Sbjct: 634 GQPYCGRTAPSCTEVPPQGSVTKEESEKEPTTVETKKQLCPYAAVGECRYGENCVYLHGD 813
Query: 225 VCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANP 284
CDMCGLQVLHP+DAAQRSQHIKSCIEAHEKDMELSFAVQR+KDMVCGICMEVVYEKANP
Sbjct: 814 SCDMCGLQVLHPVDAAQRSQHIKSCIEAHEKDMELSFAVQRTKDMVCGICMEVVYEKANP 993
Query: 285 SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXXX 344
SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWV
Sbjct: 994 SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEEKEEK 1173
Query: 345 XXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPK--------AQ 396
AMSNK CRYFDEGRGSCPFGGNCFYKHAYPDGR+EEPQR K AQ
Sbjct: 1174QKLIQKYKEAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQKVGTSSRYRAQ 1353
Query: 397 RRNRFWEFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLFH 453
RR+ FWE IEEREN +PF+ DE+EVVTF TDSEDEWDLFH
Sbjct: 1354RRSHFWELIEEREN-NPFDNDEEEVVTFELGEMLLMLLAAGGDDELTDSEDEWDLFH 1521
>gb|AC108882.1| Homo sapiens chromosome X clone RP11-77G22 map Xp11.4, complete
sequence
Length = 167569
Score = 546 bits (1407), Expect = e-153
Identities = 260/417 (62%), Positives = 293/417 (69%), Gaps = 12/417 (2%)
Frame = +1
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQVTCRYF +G+CKEGDNCRYSHDLS +VC+Y+QRGCC YGD CR EH+KPL Q
Sbjct: 73942 WTKQVTCRYFKYGICKEGDNCRYSHDLSDRLCGVVCKYFQRGCCVYGDRCRCEHSKPLKQ 74121
Query: 108 EE----ELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFV 163
EE ELTT + A + S +++ V A G+EDW NA+EFV
Sbjct: 74122 EEATATELTTKSSLAAS-SSLSSIVGPLVEMNTNEAESRNSNFATVVAGSEDWANAIEFV 74298
Query: 164 PGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHG 223
PGQPYCGR PSCT KKQLCPYAAVG+CRYGENCVY+HG
Sbjct: 74299 PGQPYCGRTVPSCTEAPLQGSVTKEESEEEQTAVETKKQLCPYAAVGQCRYGENCVYLHG 74478
Query: 224 DVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN 283
D+CDMCGLQVLHP+DAAQRSQHI++CIEAHEKDME SFAVQRSKD VCGICMEVVYEKAN
Sbjct: 74479 DLCDMCGLQVLHPMDAAQRSQHIQACIEAHEKDMEFSFAVQRSKDKVCGICMEVVYEKAN 74658
Query: 284 PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXX 343
P+E RFGILSNCNHT+CLKCIRKWRSAK+FES+I+KSCP+CRITSNFVIPSEYWV
Sbjct: 74659 PNEHRFGILSNCNHTFCLKCIRKWRSAKEFESRIVKSCPQCRITSNFVIPSEYWVEEKEE 74838
Query: 344 XXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPK--------A 395
AMSNK C+YFDEGRGSCPFG NCFYKH YPDGR+EEPQR +
Sbjct: 74839 KQKLIQKYKEAMSNKACKYFDEGRGSCPFGENCFYKHMYPDGRREEPQRQQVGTSSRNPG 75018
Query: 396 QRRNRFWEFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLF 452
Q+RN FWEF EE N +PF+ DE+E VTF TDSE+EWDLF
Sbjct: 75019 QQRNHFWEFFEEGANSNPFD-DEEEAVTFELGEMLLML*AAGGDDKLTDSENEWDLF 75186
>ref|NM_030757.1| Homo sapiens makorin, ring finger protein, 4 (MKRN4), mRNA
Length = 3686
Score = 546 bits (1407), Expect = e-153
Identities = 260/417 (62%), Positives = 293/417 (69%), Gaps = 12/417 (2%)
Frame = +1
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQVTCRYF +G+CKEGDNCRYSHDLS +VC+Y+QRGCC YGD CR EH+KPL Q
Sbjct: 610 WTKQVTCRYFKYGICKEGDNCRYSHDLSDRLCGVVCKYFQRGCCVYGDRCRCEHSKPLKQ 789
Query: 108 EE----ELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFV 163
EE ELTT + A + S +++ V A G+EDW NA+EFV
Sbjct: 790 EEATATELTTKSSLAAS-SSLSSIVGPLVEMNTNEAESRNSNFATVVAGSEDWANAIEFV 966
Query: 164 PGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHG 223
PGQPYCGR PSCT KKQLCPYAAVG+CRYGENCVY+HG
Sbjct: 967 PGQPYCGRTVPSCTEAPLQGSVTKEESEEEQTAVETKKQLCPYAAVGQCRYGENCVYLHG 1146
Query: 224 DVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN 283
D+CDMCGLQVLHP+DAAQRSQHI++CIEAHEKDME SFAVQRSKD VCGICMEVVYEKAN
Sbjct: 1147 DLCDMCGLQVLHPMDAAQRSQHIQACIEAHEKDMEFSFAVQRSKDKVCGICMEVVYEKAN 1326
Query: 284 PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXX 343
P+E RFGILSNCNHT+CLKCIRKWRSAK+FES+I+KSCP+CRITSNFVIPSEYWV
Sbjct: 1327 PNEHRFGILSNCNHTFCLKCIRKWRSAKEFESRIVKSCPQCRITSNFVIPSEYWVEEKEE 1506
Query: 344 XXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPK--------A 395
AMSNK C+YFDEGRGSCPFG NCFYKH YPDGR+EEPQR +
Sbjct: 1507 KQKLIQKYKEAMSNKACKYFDEGRGSCPFGENCFYKHMYPDGRREEPQRQQVGTSSRNPG 1686
Query: 396 QRRNRFWEFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLF 452
Q+RN FWEF EE N +PF+ DE+E VTF TDSE+EWDLF
Sbjct: 1687 QQRNHFWEFFEEGANSNPFD-DEEEAVTFELGEMLLML*AAGGDDKLTDSENEWDLF 1854
>ref|XM_035379.3| Homo sapiens makorin, ring finger protein, 4 (MKRN4), mRNA
Length = 2401
Score = 546 bits (1407), Expect = e-153
Identities = 260/417 (62%), Positives = 293/417 (69%), Gaps = 12/417 (2%)
Frame = +1
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQVTCRYF +G+CKEGDNCRYSHDLS +VC+Y+QRGCC YGD CR EH+KPL Q
Sbjct: 610 WTKQVTCRYFKYGICKEGDNCRYSHDLSDRLCGVVCKYFQRGCCVYGDRCRCEHSKPLKQ 789
Query: 108 EE----ELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFV 163
EE ELTT + A + S +++ V A G+EDW NA+EFV
Sbjct: 790 EEATATELTTKSSLAAS-SSLSSIVGPLVEMNTNEAESRNSNFATVVAGSEDWANAIEFV 966
Query: 164 PGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHG 223
PGQPYCGR PSCT KKQLCPYAAVG+CRYGENCVY+HG
Sbjct: 967 PGQPYCGRTVPSCTEAPLQGSVTKEESEEEQTAVETKKQLCPYAAVGQCRYGENCVYLHG 1146
Query: 224 DVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN 283
D+CDMCGLQVLHP+DAAQRSQHI++CIEAHEKDME SFAVQRSKD VCGICMEVVYEKAN
Sbjct: 1147 DLCDMCGLQVLHPMDAAQRSQHIQACIEAHEKDMEFSFAVQRSKDKVCGICMEVVYEKAN 1326
Query: 284 PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXX 343
P+E RFGILSNCNHT+CLKCIRKWRSAK+FES+I+KSCP+CRITSNFVIPSEYWV
Sbjct: 1327 PNEHRFGILSNCNHTFCLKCIRKWRSAKEFESRIVKSCPQCRITSNFVIPSEYWVEEKEE 1506
Query: 344 XXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPK--------A 395
AMSNK C+YFDEGRGSCPFG NCFYKH YPDGR+EEPQR +
Sbjct: 1507 KQKLIQKYKEAMSNKACKYFDEGRGSCPFGENCFYKHMYPDGRREEPQRQQVGTSSRNPG 1686
Query: 396 QRRNRFWEFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLF 452
Q+RN FWEF EE N +PF+ DE+E VTF TDSE+EWDLF
Sbjct: 1687 QQRNHFWEFFEEGANSNPFD-DEEEAVTFELGEMLLML*AAGGDDKLTDSENEWDLF 1854
>gb|U41315.1|HSU41315 Human ring zinc-finger protein (ZNF127-Xp) gene and 5' flanking
sequence
Length = 9358
Score = 546 bits (1407), Expect = e-153
Identities = 260/417 (62%), Positives = 293/417 (69%), Gaps = 12/417 (2%)
Frame = +1
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQVTCRYF +G+CKEGDNCRYSHDLS +VC+Y+QRGCC YGD CR EH+KPL Q
Sbjct: 5374 WTKQVTCRYFKYGICKEGDNCRYSHDLSDRLCGVVCKYFQRGCCVYGDRCRCEHSKPLKQ 5553
Query: 108 EE----ELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFV 163
EE ELTT + A + S +++ V A G+EDW NA+EFV
Sbjct: 5554 EEATATELTTKSSLAAS-SSLSSIVGPLVEMNTNEAESRNSNFATVVAGSEDWANAIEFV 5730
Query: 164 PGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHG 223
PGQPYCGR PSCT KKQLCPYAAVG+CRYGENCVY+HG
Sbjct: 5731 PGQPYCGRTVPSCTEAPLQGSVTKEESEEEQTAVETKKQLCPYAAVGQCRYGENCVYLHG 5910
Query: 224 DVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN 283
D+CDMCGLQVLHP+DAAQRSQHI++CIEAHEKDME SFAVQRSKD VCGICMEVVYEKAN
Sbjct: 5911 DLCDMCGLQVLHPMDAAQRSQHIQACIEAHEKDMEFSFAVQRSKDKVCGICMEVVYEKAN 6090
Query: 284 PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXX 343
P+E RFGILSNCNHT+CLKCIRKWRSAK+FES+I+KSCP+CRITSNFVIPSEYWV
Sbjct: 6091 PNEHRFGILSNCNHTFCLKCIRKWRSAKEFESRIVKSCPQCRITSNFVIPSEYWVEEKEE 6270
Query: 344 XXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPK--------A 395
AMSNK C+YFDEGRGSCPFG NCFYKH YPDGR+EEPQR +
Sbjct: 6271 KQKLIQKYKEAMSNKACKYFDEGRGSCPFGENCFYKHMYPDGRREEPQRQQVGTSSRNPG 6450
Query: 396 QRRNRFWEFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLF 452
Q+RN FWEF EE N +PF+ DE+E VTF TDSE+EWDLF
Sbjct: 6451 QQRNHFWEFFEEGANSNPFD-DEEEAVTFELGEMLLML*AAGGDDKLTDSENEWDLF 6618
>dbj|AK027137.1|AK027137 Homo sapiens cDNA: FLJ23484 fis, clone KAIA04822, highly similar to
AF192784 Homo sapiens makorin 1 (MKRN1) mRNA
Length = 2697
Score = 536 bits (1380), Expect = e-150
Identities = 261/384 (67%), Positives = 277/384 (71%), Gaps = 12/384 (3%)
Frame = +2
Query: 82 VCRYYQRGCCAYGDHCRYEHTKPLMQEE----ELTTVNPAAKTYPSDLALLPETVXXXXX 137
VC+Y+QRG C YGD CRYEH+KPL QEE ELTT + A + S +++ V
Sbjct: 2 VCKYFQRGYCIYGDRCRYEHSKPLKQEEATATELTTKSSLAAS-SSLSSIVGPLVEMNTG 178
Query: 138 XXXXXXXXLAAAGVGAEDWVNAVEFVPGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXX 197
A G G+EDWVNA+EFVPGQPYCGR APSCT
Sbjct: 179 EAESRNSNFATVGAGSEDWVNAIEFVPGQPYCGRTAPSCTEAPLQGSVTKEESEKEQTAV 358
Query: 198 XMKKQLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDM 257
KKQLCPYAAVGECRYGENCVY+HGD CDMCGLQVLHP+DAAQRSQHIKSCIEAHEKDM
Sbjct: 359 ETKKQLCPYAAVGECRYGENCVYLHGDSCDMCGLQVLHPMDAAQRSQHIKSCIEAHEKDM 538
Query: 258 ELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKI 317
ELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKI
Sbjct: 539 ELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKI 718
Query: 318 IKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCF 377
IKSCPECRITSNFVIPSEYWV AMSNK CRYFDEGRGSCPFGGNCF
Sbjct: 719 IKSCPECRITSNFVIPSEYWVEEKEEKQKLILKYKEAMSNKACRYFDEGRGSCPFGGNCF 898
Query: 378 YKHAYPDGRQEEPQRPK--------AQRRNRFWEFIEERENGDPFETDEDEVVTFXXXXX 429
YKHAYPDGR+EEPQR K AQRRN FWE IEEREN +PF+ DE+EVVTF
Sbjct: 899 YKHAYPDGRREEPQRQKVGTSSRYRAQRRNHFWELIEERENSNPFDNDEEEVVTFELGEM 1078
Query: 430 XXXXXXXXXXXXXTDSEDEWDLFH 453
TDSEDEWDLFH
Sbjct: 1079LLMLLAAGGDDELTDSEDEWDLFH 1150
>gb|AF277173.1|AF277173 Danio rerio Makorin RING zinc-finger protein 1 (mkrn1) mRNA,
partial cds
Length = 2369
Score = 526 bits (1356), Expect = e-147
Identities = 249/416 (59%), Positives = 284/416 (67%), Gaps = 10/416 (2%)
Frame = +2
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTK VTCRYFMHG+CKEG+NCRYSHDLS+ + M+C+++Q+GCCA+GD CRYEHTKP Q
Sbjct: 62 WTKHVTCRYFMHGLCKEGENCRYSHDLSSCKQTMICKFFQKGCCAFGDRCRYEHTKPSKQ 241
Query: 108 EEELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFVPGQP 167
+E + + P+ + LA PE V G GA DWVNA EFVPGQP
Sbjct: 242 DE-VPSSKPSMPLTAAPLAGTPEPVSDGPGGTTGAQEK--PQGSGAVDWVNAAEFVPGQP 412
Query: 168 YCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHGDVCD 227
YCGRA P MKKQLCPYAAVGECRYG NC Y+HGDVCD
Sbjct: 413 YCGRADP--VLCEGPGPLIEEEYEKEQANKEMKKQLCPYAAVGECRYGLNCAYLHGDVCD 586
Query: 228 MCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSER 287
MCGLQVLHP D +QRSQHI++CIEAHEKDME+SFA+QRSKDM+CG+CMEVV+EK NPSER
Sbjct: 587 MCGLQVLHPSDTSQRSQHIRACIEAHEKDMEISFAIQRSKDMMCGVCMEVVFEKTNPSER 766
Query: 288 RFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXXXXXX 347
RFGILSNC H YCLKCIRKWRSAKQFESKIIKSCPECRITSN VIPSEYWV
Sbjct: 767 RFGILSNCCHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNLVIPSEYWVEDKEEKQQL 946
Query: 348 XXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQ----------R 397
M KPCRYFDEGRG+CPFG NCFYKHA+PDGR EEPQ + Q R
Sbjct: 947 IQKYKDGMGTKPCRYFDEGRGTCPFGANCFYKHAFPDGRLEEPQPQRRQNGSNGRNRNTR 1126
Query: 398 RNRFWEFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLFH 453
R W+ ++EREN D F+ +++E+V F TDSEDEWDLFH
Sbjct: 1127RTHLWDLLDERENSDSFDNEDEEMVRFELSEMLLMLLAAGTDDDVTDSEDEWDLFH 1294
>gb|AC079598.13|AC079598 Homo sapiens 12q BAC RP11-248E9 (Roswell Park Cancer Institute Human
BAC Library) complete sequence
Length = 168901
Score = 325 bits (833), Expect(2) = e-135
Identities = 160/231 (69%), Positives = 170/231 (73%), Gaps = 8/231 (3%)
Frame = +1
Query: 231 LQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFG 290
LQVLH +DAAQRSQHIKSC EAHEKD ELSFAVQRS++MVC CME++YEKANP + RFG
Sbjct: 61588 LQVLHLMDAAQRSQHIKSCFEAHEKDRELSFAVQRSEEMVCESCMEMIYEKANPRQHRFG 61767
Query: 291 ILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXX 350
ILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFV+PSEY V
Sbjct: 61768 ILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVVPSEYCVEEKEEKQKLILK 61947
Query: 351 XXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPK--------AQRRNRFW 402
AMSNK CRYFDEG GSCPFGGN FYKH YPDGR+EEPQR K AQ RN FW
Sbjct: 61948 YKEAMSNKACRYFDEGHGSCPFGGNGFYKHVYPDGRREEPQRQKVGTSSRYPAQ*RNHFW 62127
Query: 403 EFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLFH 453
E IEEREN PF+ DE+EVVTF TDSEDE DLFH
Sbjct: 62128 ELIEERENSSPFDNDEEEVVTFELGELLLMLLAAVGDDELTDSEDESDLFH 62280
Score = 184 bits (466), Expect(2) = e-135
Identities = 100/189 (52%), Positives = 110/189 (57%), Gaps = 6/189 (3%)
Frame = +2
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQVTCRYFMHGV KEGDNC HDLS +V + Q G C YGD CRYEH+KPL Q
Sbjct: 61034 WTKQVTCRYFMHGVYKEGDNCCKLHDLSDSPYNVVYKSLQPGYCIYGDCCRYEHSKPLKQ 61213
Query: 108 EE----ELTTVNPAAKTYPSDLA-LLPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEF 162
+E ELTT + A + S L+ ++ V G G+E WVNAVEF
Sbjct: 61214 KEATATELTTKSSLAAS--SSLSWIVGPLVEMNTGEAESRNSNFVTVGAGSEGWVNAVEF 61387
Query: 163 VPGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGEN-CVYI 221
VPGQPYCGR APSCT KKQLCPYAAVGECRY EN CVY
Sbjct: 61388 VPGQPYCGRTAPSCTEAPLQGSVTKEESEKEQTAVETKKQLCPYAAVGECRYRENLCVY- 61564
Query: 222 HGDVCDMCG 230
GD CDMCG
Sbjct: 61565 -GDSCDMCG 61588
>ref|XM_090288.1| Homo sapiens similar to makorin, ring finger protein, 1
(LOC160420), mRNA
Length = 1533
Score = 460 bits (1184), Expect = e-127
Identities = 241/411 (58%), Positives = 258/411 (62%), Gaps = 5/411 (1%)
Frame = +1
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQVTCRYFMHGV KEGDNC HDLS +V + Q G C YGD CRYEH+KPL Q
Sbjct: 340 WTKQVTCRYFMHGVYKEGDNCCKLHDLSDSPYNVVYKSLQPGYCIYGDCCRYEHSKPLKQ 519
Query: 108 EE----ELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFV 163
+E ELTT + A + + P V G G+E WVNAVEFV
Sbjct: 520 KEATATELTTKSSLAASSSLSWIVGP-LVEMNTGEAESRNSNFVTVGAGSEGWVNAVEFV 696
Query: 164 PGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGEN-CVYIH 222
PGQPYCGR APSCT KKQLCPYAAVGECRY EN CVY
Sbjct: 697 PGQPYCGRTAPSCTEAPLQGSVTKEESEKEQTAVETKKQLCPYAAVGECRYRENLCVY-- 870
Query: 223 GDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKA 282
GD CDMCG RSQHIKSC EAHEKD ELSFAVQRS++MVC CME++YEKA
Sbjct: 871 GDSCDMCGC----------RSQHIKSCFEAHEKDRELSFAVQRSEEMVCESCMEMIYEKA 1020
Query: 283 NPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXX 342
NP + RFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFV+PSEY V
Sbjct: 1021NPRQHRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVVPSEYCVEEKE 1200
Query: 343 XXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQRRNRFW 402
AMSNK CRYFDEG GSCPFGGN FYKH YPDGR+EEPQR K
Sbjct: 1201EKQKLILKYKEAMSNKACRYFDEGHGSCPFGGNGFYKHVYPDGRREEPQRQK-------- 1356
Query: 403 EFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLFH 453
EREN PF+ DE+EVVTF TDSEDE DLFH
Sbjct: 1357----ERENSSPFDNDEEEVVTFELGELLLMLLAAVGDDELTDSEDESDLFH 1497
>emb|AL359740.24|AL359740 Human DNA sequence from clone RP13-204A15 on chromosome X, complete
sequence [Homo sapiens]
Length = 98104
Score = 433 bits (1114), Expect(2) = e-127
Identities = 211/349 (60%), Positives = 232/349 (66%), Gaps = 4/349 (1%)
Frame = -2
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQVTCRYFMHGVCK+ NC +SHDLS +VC+Y+Q+G C YGD C+YEH+KPL Q
Sbjct: 90858 WTKQVTCRYFMHGVCKDRGNCGFSHDLSDSPYGVVCKYFQQGYCVYGDRCKYEHSKPLNQ 90679
Query: 108 EE----ELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFV 163
EE ELTT + A + + L V A G G+ DWVNA+EFV
Sbjct: 90678 EEGTAAELTTKSSIAAS-----SSLSSIVEMNTSEAESRNSNFATVGAGSGDWVNAIEFV 90514
Query: 164 PGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHG 223
PGQPYCG PS T KKQLCP+AAVGEC YGENCVY+HG
Sbjct: 90513 PGQPYCGPTVPSFTEAPLQGPVTKEESEKKQIAMETKKQLCPFAAVGEC*YGENCVYLHG 90334
Query: 224 DVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN 283
D CDM G QVLHP+D AQRSQ IKSCIE+HEKD+ELSFAVQR KDMVCGICMEVVYEKAN
Sbjct: 90333 DSCDMYGPQVLHPMDTAQRSQRIKSCIESHEKDIELSFAVQRGKDMVCGICMEVVYEKAN 90154
Query: 284 PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXX 343
PS R F + CNHTYCLKCI WR AKQFESKIIKSCPEC+ITSN VIPSEYWV
Sbjct: 90153 PS*RCFVVFFICNHTYCLKCICTWRRAKQFESKIIKSCPECQITSNLVIPSEYWVEEKEE 89974
Query: 344 XXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQR 392
MSNK C YFDEG GSCPFGGNCFYKHA G + R
Sbjct: 89973 KQKLVQKYKETMSNKACTYFDEGHGSCPFGGNCFYKHA*RGGERSHGDR 89827
Score = 48.9 bits (115), Expect(2) = e-127
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 8/45 (17%)
Frame = -1
Query: 386 RQEEPQRPK--------AQRRNRFWEFIEERENGDPFETDEDEVV 422
R+EEP+R K AQ+RN FWE IEEREN +PF++ E+ V+
Sbjct: 89851 RREEPRRQKVGTLSRYGAQQRNHFWELIEERENSNPFDSKEEVVI 89717
>gb|U41316.1|HSU41316 Human ZNF127-Xq pseudogene
Length = 3758
Score = 432 bits (1110), Expect(2) = e-127
Identities = 210/349 (60%), Positives = 231/349 (66%), Gaps = 4/349 (1%)
Frame = +1
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQVTCRYFMHGVCK+ NC +SHDLS +VC+Y+Q+G C YGD C+YEH+KPL Q
Sbjct: 580 WTKQVTCRYFMHGVCKDRGNCGFSHDLSDSPYGVVCKYFQQGYCVYGDRCKYEHSKPLNQ 759
Query: 108 EE----ELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFV 163
EE ELTT + A + + L V A G G+ DWVNA+EFV
Sbjct: 760 EEGTAAELTTKSSIAAS-----SSLSSIVEMNTSEAESRNSNFATVGAGSGDWVNAIEFV 924
Query: 164 PGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHG 223
PGQPYCG PS T KKQLCP+AAVGEC YGENCVY+HG
Sbjct: 925 PGQPYCGPTVPSFTEAPLQGPVTKEESEKKQIAMETKKQLCPFAAVGEC*YGENCVYLHG 1104
Query: 224 DVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN 283
D CDM G QVLHP+D AQRSQ IKSCIE+HEKD+ELSFAVQR KDMVCGICMEVVYEKAN
Sbjct: 1105DSCDMYGPQVLHPMDTAQRSQRIKSCIESHEKDIELSFAVQRGKDMVCGICMEVVYEKAN 1284
Query: 284 PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXX 343
PS R F + CNHTYCLKCI WR AKQFESKIIKSCPEC+ITSN VIPSEYWV
Sbjct: 1285PS*RCFVVFFICNHTYCLKCICTWRRAKQFESKIIKSCPECQITSNLVIPSEYWVEEKEE 1464
Query: 344 XXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQR 392
MSNK C YFDEG GSCPFGGNCFYKH G + R
Sbjct: 1465KQKLVQKYKETMSNKACTYFDEGHGSCPFGGNCFYKHV*RGGERSHGDR 1611
Score = 48.9 bits (115), Expect(2) = e-127
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 8/45 (17%)
Frame = +3
Query: 386 RQEEPQRPK--------AQRRNRFWEFIEERENGDPFETDEDEVV 422
R+EEP+R K AQ+RN FWE IEEREN +PF++ E+ V+
Sbjct: 1587 RREEPRRQKVGTLSRYGAQQRNHFWELIEERENSNPFDSKEEVVI 1721
>gb|BC003329.1|BC003329 Mus musculus, Similar to makorin, ring finger protein, 1, clone
MGC:7132 IMAGE:3158135, mRNA, complete cds
Length = 1523
Score = 409 bits (1050), Expect = e-112
Identities = 193/275 (70%), Positives = 205/275 (74%), Gaps = 3/275 (1%)
Frame = +1
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQVTCRYFMHGVCKEGDNCRYSHDLS +VC+Y+QRG C YGD CRYEH+KPL Q
Sbjct: 238 WTKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHSKPLKQ 417
Query: 108 EEELTTVNPAAKTYPSDLAL---LPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFVP 164
EE T A + + +L + G G+EDWVNA+EFVP
Sbjct: 418 EEVTATDLSAKPSLAASSSLSSGVGSLAEMNSGEAESRNPSFPTVGAGSEDWVNAIEFVP 597
Query: 165 GQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHGD 224
GQPYCGR APSCT KKQLCPYAAVGECRYGENCVY+HGD
Sbjct: 598 GQPYCGRTAPSCTEVPPQGSVTKEESEKEPTTVETKKQLCPYAAVGECRYGENCVYLHGD 777
Query: 225 VCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANP 284
CDMCGLQVLHP+DAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANP
Sbjct: 778 SCDMCGLQVLHPVDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANP 957
Query: 285 SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIK 319
SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIK
Sbjct: 958 SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIK 1062
>gb|AF117233.1|AF117233 Homo sapiens znf-xp protein mRNA, complete cds
Length = 1610
Score = 406 bits (1044), Expect = e-111
Identities = 196/276 (71%), Positives = 210/276 (76%), Gaps = 4/276 (1%)
Frame = +3
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQVTCRYFMHGVCKEGDNCRYSHDLS ++VC+Y+QRG C YGD CRYEH+KPL Q
Sbjct: 318 WTKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHSKPLKQ 497
Query: 108 EE----ELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFV 163
EE ELTT + A + S +++ V A G G+EDWVNA+EFV
Sbjct: 498 EEATATELTTKSSLAAS-SSLSSIVGPLVEMNTGERESRNSNFATVGAGSEDWVNAIEFV 674
Query: 164 PGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHG 223
PGQPYCGR APSCT KKQLCPYAAVGECRYGENCVY+HG
Sbjct: 675 PGQPYCGRTAPSCTEAPLQGSVTKEESEKEQTAVETKKQLCPYAAVGECRYGENCVYLHG 854
Query: 224 DVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKAN 283
D CDMCGLQVLHP+DAAQRSQHIKSCIEAHEKDMELSFAV SKDMVCGICMEVVYEKAN
Sbjct: 855 DSCDMCGLQVLHPMDAAQRSQHIKSCIEAHEKDMELSFAVS-SKDMVCGICMEVVYEKAN 1031
Query: 284 PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIK 319
PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIK
Sbjct: 1032PSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIK 1139
>dbj|AK005137.1|AK005137 Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched
library, clone:1500003O18:makorin, ring finger protein,
1, full insert sequence
Length = 1348
Score = 392 bits (1006), Expect = e-107
Identities = 186/268 (69%), Positives = 198/268 (73%), Gaps = 3/268 (1%)
Frame = +2
Query: 55 RYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQEEELTTV 114
RYFMHGVCKEGDNCRYSHDLS +VC+Y+QRG C YGD CRYEH+KPL QEE T
Sbjct: 104 RYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHSKPLKQEEVTATD 283
Query: 115 NPAAKTYPSDLAL---LPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFVPGQPYCGR 171
A + + +L + G G+EDWVNA+EFVPGQPYCGR
Sbjct: 284 LSAKPSLAASSSLSSGVGSLAEMNSGEAESRNPSFPTVGAGSEDWVNAIEFVPGQPYCGR 463
Query: 172 AAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHGDVCDMCGL 231
APSCT KKQLCPYAAVGECRYGENCVY+HGD CDMCGL
Sbjct: 464 TAPSCTEVPPQGSVTKEESEKEPTTVETKKQLCPYAAVGECRYGENCVYLHGDSCDMCGL 643
Query: 232 QVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGI 291
QVLHP+DAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGI
Sbjct: 644 QVLHPVDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGI 823
Query: 292 LSNCNHTYCLKCIRKWRSAKQFESKIIK 319
LSNCNHTYCLKCIRKWRSAKQFESKIIK
Sbjct: 824 LSNCNHTYCLKCIRKWRSAKQFESKIIK 907
>gb|U19107.1|HSU19107 Homo sapiens ZNF127 (ZNF127) gene, complete cds; and FNZ127 gene,
partial sequence
Length = 4915
Score = 376 bits (966), Expect = e-102
Identities = 191/411 (46%), Positives = 240/411 (57%), Gaps = 5/411 (1%)
Frame = +1
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQ+ CRY++HG CKEG+NCRYSHDLS + A G A G H +P Q
Sbjct: 1360 WTKQIICRYYIHGQCKEGENCRYSHDLSGRKMATEGGVSPPGASAGGGPSTAAHIEPPTQ 1539
Query: 108 EEELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAG-VGAEDWVNAVEFVPGQ 166
E + PAA + L ++ AAG G E W +A+EFVPGQ
Sbjct: 1540 E--VAEAPPAASSL--SLPVIGSAAERGFFEAERDNADRGAAGGAGVESWADAIEFVPGQ 1707
Query: 167 PYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHGDVC 226
PY GR S + C YA+ G C GE+C+Y+HGD+C
Sbjct: 1708 PYRGRWVASAPEAPLQSSETERKQMAVGSGL----RFCYYASRGVCFRGESCMYLHGDIC 1875
Query: 227 DMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSE 286
DMCGLQ LHP+DAAQR +H+++CIEAHEKDMELSFAVQR D VCGICMEVVYEKANP++
Sbjct: 1876 DMCGLQTLHPMDAAQREEHMRACIEAHEKDMELSFAVQRGMDKVCGICMEVVYEKANPND 2055
Query: 287 RRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXXXXX 346
RRFGILSNCNH++C++CIR+WRSA+QFE++I+KSCP+CR+TS VIPSE+WV
Sbjct: 2056 RRFGILSNCNHSFCIRCIRRWRSARQFENRIVKSCPQCRVTSELVIPSEFWVEEEEEKQK 2235
Query: 347 XXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQRRNRFW---- 402
AMSNK CRYF EGRG+CPFG CFYKH YP+G +EP P + +W
Sbjct: 2236 LIQQYKEAMSNKACRYFAEGRGNCPFGDTCFYKHEYPEGWGDEPPGPGGGSFSAYWHQLV 2415
Query: 403 EFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLFH 453
E + E +++ + E+V SED+WDL H
Sbjct: 2416 EPVRMGEGNMLYKSIKKELVVL-RLASLLFKRFLSLRDELPFSEDQWDLLH 2565
>ref|NM_005664.1| Homo sapiens makorin, ring finger protein, 3 (MKRN3), mRNA
Length = 2772
Score = 376 bits (966), Expect = e-102
Identities = 191/411 (46%), Positives = 240/411 (57%), Gaps = 5/411 (1%)
Frame = +2
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQ+ CRY++HG CKEG+NCRYSHDLS + A G A G H +P Q
Sbjct: 392 WTKQIICRYYIHGQCKEGENCRYSHDLSGRKMATEGGVSPPGASAGGGPSTAAHIEPPTQ 571
Query: 108 EEELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAG-VGAEDWVNAVEFVPGQ 166
E + PAA + L ++ AAG G E W +A+EFVPGQ
Sbjct: 572 E--VAEAPPAASSL--SLPVIGSAAERGFFEAERDNADRGAAGGAGVESWADAIEFVPGQ 739
Query: 167 PYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHGDVC 226
PY GR S + C YA+ G C GE+C+Y+HGD+C
Sbjct: 740 PYRGRWVASAPEAPLQSSETERKQMAVGSGL----RFCYYASRGVCFRGESCMYLHGDIC 907
Query: 227 DMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSE 286
DMCGLQ LHP+DAAQR +H+++CIEAHEKDMELSFAVQR D VCGICMEVVYEKANP++
Sbjct: 908 DMCGLQTLHPMDAAQREEHMRACIEAHEKDMELSFAVQRGMDKVCGICMEVVYEKANPND 1087
Query: 287 RRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXXXXX 346
RRFGILSNCNH++C++CIR+WRSA+QFE++I+KSCP+CR+TS VIPSE+WV
Sbjct: 1088RRFGILSNCNHSFCIRCIRRWRSARQFENRIVKSCPQCRVTSELVIPSEFWVEEEEEKQK 1267
Query: 347 XXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQRRNRFW---- 402
AMSNK CRYF EGRG+CPFG CFYKH YP+G +EP P + +W
Sbjct: 1268LIQQYKEAMSNKACRYFAEGRGNCPFGDTCFYKHEYPEGWGDEPPGPGGGSFSAYWHQLV 1447
Query: 403 EFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLFH 453
E + E +++ + E+V SED+WDL H
Sbjct: 1448EPVRMGEGNMLYKSIKKELVVL-RLASLLFKRFLSLRDELPFSEDQWDLLH 1597
>emb|AL589843.9|AL589843 Human DNA sequence from clone RP11-535M15 on chromosome 9, complete
sequence [Homo sapiens]
Length = 142527
Score = 330 bits (846), Expect(2) = 3e-90
Identities = 167/232 (71%), Positives = 179/232 (76%), Gaps = 8/232 (3%)
Frame = +3
Query: 200 KKQLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMEL 259
KKQLCP AAV EC GENCV +HGD CDMCGLQVLHP+ AAQRSQHIK CIEAHEKDMEL
Sbjct: 66591 KKQLCPCAAVREC*DGENCVPLHGDSCDMCGLQVLHPMAAAQRSQHIKLCIEAHEKDMEL 66770
Query: 260 SFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIK 319
S AVQRSKD+V GICMEVVYEKANPSE FGILSNCNH YCLKCIRKW SAKQF+SKIIK
Sbjct: 66771 SLAVQRSKDVVYGICMEVVYEKANPSECCFGILSNCNHAYCLKCIRKWSSAKQFQSKIIK 66950
Query: 320 SCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYK 379
SC +C+ITSNFVIPSE WV A+SNK CRYFDEGRGSCPFG NCFYK
Sbjct: 66951 SCLDCQITSNFVIPSESWVEKEEKQKLIQKYKE-ALSNKACRYFDEGRGSCPFGRNCFYK 67127
Query: 380 HAYPDGRQEEPQRPKA--------QRRNRFWEFIEERENGDPFETDEDEVVT 423
HAYPDG E+PQR K Q RN F E EER++ +PF+ DE EVVT
Sbjct: 67128 HAYPDGLTEKPQRQKVGTSSRNWVQ*RNHF*ELTEERDSSNPFDNDE-EVVT 67280
Score = 126 bits (316), Expect(2) = 1e-29
Identities = 63/118 (53%), Positives = 75/118 (63%), Gaps = 4/118 (3%)
Frame = +2
Query: 57 FMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQEE----ELT 112
F GVCKEGDNCRYSHDLS +VC+Y+Q G C YGD CRYEH+KPL QEE ELT
Sbjct: 66074 FYAGVCKEGDNCRYSHDLSDSPCGVVCKYFQ*GYCIYGDRCRYEHSKPLKQEEAAATELT 66253
Query: 113 TVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFVPGQPYCG 170
T++ A + S L+L+ V A G G+EDWV+A+EFVPGQPY G
Sbjct: 66254 TISSLAAS-SSLLSLVGPLVEMNTGEAESRNSNFAIVGAGSEDWVHAIEFVPGQPYFG 66424
Score = 29.6 bits (65), Expect(2) = 1e-29
Identities = 11/17 (64%), Positives = 13/17 (75%)
Frame = +3
Query: 48 WTKQVTCRYFMHGVCKE 64
W KQVTCRYFM G ++
Sbjct: 66048 WIKQVTCRYFMLGFVRK 66098
Score = 28.1 bits (61), Expect(2) = 3e-90
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 444 DSEDEWDLFH 453
DSEDEWDLFH
Sbjct: 67342 DSEDEWDLFH 67371
>gb|AC027298.20|AC027298 Mus musculus 7 BAC RP23-266F22 (Roswell Park Cancer Institute Mouse BAC
Library) complete sequence
Length = 201467
Score = 335 bits (860), Expect = 4e-90
Identities = 177/381 (46%), Positives = 211/381 (54%), Gaps = 35/381 (9%)
Frame = +3
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLS------TGQSAMVCRYYQRGCCAYGDHCRYE- 100
WTKQ+ CRY++HG CKEGDNCRYSHDLS GQ A RG R+E
Sbjct: 125655 WTKQILCRYYLHGQCKEGDNCRYSHDLSGRRRSRGGQDAQPRASADRGPKM---ATRWEP 125825
Query: 101 ------HTKPLMQEEELTTVNPAAKTYPSDLAL-------LPETVXXXXXXXXXXXXXLA 147
P L + AA+ ++ + E A
Sbjct: 125826 PTQEVAEAPPAASSSSLPLIGSAAERGFTEAEIDNAGIRSAAERGFSEAEIDNASLAAGA 126005
Query: 148 AAGVGAEDWVNAVEFVPGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXX--------- 198
AAG GAE W A+EFVPGQPY GR P
Sbjct: 126006 AAGAGAEGWEGAIEFVPGQPYRGRMVPPHGPEAPLQSPAIEREHMAMGMGMPMPVPMPMP 126185
Query: 199 ------MKKQLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEA 252
M LC YAA G+C G+ C Y HG++CDMCG Q LHP DAAQ+ H ++C+EA
Sbjct: 126186 VPMPVPMPLPLCRYAARGQCLRGDRCAYPHGEICDMCGQQALHPWDAAQQEAHRRACVEA 126365
Query: 253 HEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQ 312
HE+DMELSFAVQRS D VCGICMEVVYEKA+PS+RRFGIL +CNHTYCL+CIR+WRSA Q
Sbjct: 126366 HERDMELSFAVQRSMDKVCGICMEVVYEKADPSDRRFGILFSCNHTYCLRCIRRWRSATQ 126545
Query: 313 FESKIIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPF 372
FE++I KSCP+CR++S FVIPSE+WV MS K CRYF G G CPF
Sbjct: 126546 FENRISKSCPQCRVSSGFVIPSEFWVEEEEEKEKLVQQYKEGMSQKACRYFAGGLGHCPF 126725
Query: 373 GGNCFYKHAYPDGRQEEPQRP 393
G CFYKH YP+G +++P RP
Sbjct: 126726 GEFCFYKHEYPEGWRDQPPRP 126788
>gb|U19106.1|MMU19106 Mus domesticus ZNF127 (znf127) gene, complete cds
Length = 3259
Score = 335 bits (858), Expect = 7e-90
Identities = 176/381 (46%), Positives = 211/381 (55%), Gaps = 35/381 (9%)
Frame = +3
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLS------TGQSAMVCRYYQRGCCAYGDHCRYE- 100
WTKQ+ CRY++HG CKEGDNCRYSHDLS GQ A RG R+E
Sbjct: 990 WTKQILCRYYLHGQCKEGDNCRYSHDLSGRRRSRGGQDAQPRASADRGPKM---ATRWEP 1160
Query: 101 ------HTKPLMQEEELTTVNPAAKTYPSDLAL-------LPETVXXXXXXXXXXXXXLA 147
P L + AA+ ++ + E A
Sbjct: 1161 PTQEVVEAPPAASSSSLPLIGSAAERGFTEAEIDNAGIRSAAERGFSEAEIDNASLAAGA 1340
Query: 148 AAGVGAEDWVNAVEFVPGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXX--------- 198
AAG GAE W A+EFVPGQPY GR P
Sbjct: 1341 AAGAGAEGWEGAIEFVPGQPYRGRVVPPHGPEAPLQSPAIEREHMAMGMGMPMPVPMPMP 1520
Query: 199 ------MKKQLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEA 252
M LC YAA G+C G+ C Y HG++CDMCG Q LHP DAAQ+ H ++C+EA
Sbjct: 1521 VPMPVPMPLPLCRYAARGQCLRGDRCAYPHGEICDMCGQQALHPWDAAQQEAHRRACVEA 1700
Query: 253 HEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQ 312
HE+DMELSFAVQRS D VCGICMEVVYEKA+P++RRFGIL +CNHTYCL+CIR+WRSA Q
Sbjct: 1701 HERDMELSFAVQRSMDKVCGICMEVVYEKADPTDRRFGILFSCNHTYCLRCIRRWRSATQ 1880
Query: 313 FESKIIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPF 372
FE++I KSCP+CR++S FVIPSE+WV MS K CRYF G G CPF
Sbjct: 1881 FENRISKSCPQCRVSSGFVIPSEFWVEEEEEKEKLVQQYKEGMSQKACRYFAGGLGHCPF 2060
Query: 373 GGNCFYKHAYPDGRQEEPQRP 393
G CFYKH YP+G +++P RP
Sbjct: 2061 GEFCFYKHEYPEGWRDQPPRP 2123
>ref|NM_011746.1| Mus musculus zinc finger protein 127 (Zfp127), mRNA
Length = 2563
Score = 335 bits (858), Expect = 7e-90
Identities = 176/381 (46%), Positives = 211/381 (55%), Gaps = 35/381 (9%)
Frame = +2
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLS------TGQSAMVCRYYQRGCCAYGDHCRYE- 100
WTKQ+ CRY++HG CKEGDNCRYSHDLS GQ A RG R+E
Sbjct: 389 WTKQILCRYYLHGQCKEGDNCRYSHDLSGRRRSRGGQDAQPRASADRGPKM---ATRWEP 559
Query: 101 ------HTKPLMQEEELTTVNPAAKTYPSDLAL-------LPETVXXXXXXXXXXXXXLA 147
P L + AA+ ++ + E A
Sbjct: 560 PTQEVVEAPPAASSSSLPLIGSAAERGFTEAEIDNAGIRSAAERGFSEAEIDNASLAAGA 739
Query: 148 AAGVGAEDWVNAVEFVPGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXX--------- 198
AAG GAE W A+EFVPGQPY GR P
Sbjct: 740 AAGAGAEGWEGAIEFVPGQPYRGRVVPPHGPEAPLQSPAIEREHMAMGMGMPMPVPMPMP 919
Query: 199 ------MKKQLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEA 252
M LC YAA G+C G+ C Y HG++CDMCG Q LHP DAAQ+ H ++C+EA
Sbjct: 920 VPMPVPMPLPLCRYAARGQCLRGDRCAYPHGEICDMCGQQALHPWDAAQQEAHRRACVEA 1099
Query: 253 HEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQ 312
HE+DMELSFAVQRS D VCGICMEVVYEKA+P++RRFGIL +CNHTYCL+CIR+WRSA Q
Sbjct: 1100HERDMELSFAVQRSMDKVCGICMEVVYEKADPTDRRFGILFSCNHTYCLRCIRRWRSATQ 1279
Query: 313 FESKIIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPF 372
FE++I KSCP+CR++S FVIPSE+WV MS K CRYF G G CPF
Sbjct: 1280FENRISKSCPQCRVSSGFVIPSEFWVEEEEEKEKLVQQYKEGMSQKACRYFAGGLGHCPF 1459
Query: 373 GGNCFYKHAYPDGRQEEPQRP 393
G CFYKH YP+G +++P RP
Sbjct: 1460GEFCFYKHEYPEGWRDQPPRP 1522
>gb|AF277172.1|AF277172 Danio rerio Makorin RING zinc-finger protein 2 (mkrn2) mRNA,
complete cds
Length = 2005
Score = 299 bits (765), Expect = 4e-79
Identities = 163/422 (38%), Positives = 218/422 (51%), Gaps = 49/422 (11%)
Frame = +2
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMV--------------CRYYQ-----RG 89
TKQVTCRYF+HGVC+EG C +SHDL+T + + + CRY RG
Sbjct: 68 TKQVTCRYFLHGVCREGSRCLFSHDLTTSKPSTICKYYQRGACAYGDRCRYDHIKPPGRG 247
Query: 90 CCAYGDHCRYEHT--------------------KPLMQEEELTTVNPAAKTYPSDLALLP 129
A DH + KPL+ ++ + + + ++ + L
Sbjct: 248 SGAPADHSNRSSSSAGASAPGPGPPANTSKHLKKPLVLRDKALCSDSRPRVFSAESSELS 427
Query: 130 ETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFVPGQPYCGRAAPSCTXXXXXXXXXXXX 189
E L A G + A P + +P
Sbjct: 428 ECWEQRDDGAQKPHSYLEAIRSGLDASAAAAATAGTFPELQQTSP--------------- 562
Query: 190 XXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSC 249
Q+CP+ A G+C+YGE+C Y+HG++C++C VLHP D QR+ H K C
Sbjct: 563 ------------QICPFLAAGQCQYGESCPYLHGEMCEICRQHVLHPHDPEQRAAHEKKC 706
Query: 250 IEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRS 309
+ A E DME +FAVQ+S+D VC IC++VVYEK++PSERRFGILS+C HTYCL CIR+WR
Sbjct: 707 MVAFEMDMERAFAVQQSQDKVCKICLDVVYEKSSPSERRFGILSSCAHTYCLNCIRQWRC 886
Query: 310 AKQFESKIIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGS 369
+Q ++I KSCPECR+ S FVIPS YWV +S K C+YFD+GRG+
Sbjct: 887 VEQLHNQIRKSCPECRVVSEFVIPSIYWVEDQEQKNLLIEEFKSGVSKKACKYFDQGRGT 1066
Query: 370 CPFGGNCFYKHAYPDGRQEEPQRPKA----------QRRNRFWEFIEERENGDPFETDED 419
CPFGG CFY HAY DGR+ EP +P+ Q R W+FIEERE+ + ED
Sbjct: 1067CPFGGKCFYMHAYADGRRAEPDKPRKQLSAEGNVRFQNSVRLWDFIEEREHRSVPQL-ED 1243
Query: 420 EV 421
EV
Sbjct: 1244EV 1249
>gb|AF439559.1|AF439559 Gallus gallus makorin-2 (MKRN2) mRNA, complete cds
Length = 1665
Score = 287 bits (735), Expect = 1e-75
Identities = 127/228 (55%), Positives = 157/228 (68%), Gaps = 10/228 (4%)
Frame = +3
Query: 201 KQLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELS 260
+QLCPYAA G C +G+ C+Y+HGDVC++CGLQVLHP D QR H C+ E +ME +
Sbjct: 516 EQLCPYAAAGACHFGDRCLYLHGDVCEICGLQVLHPFDQEQRKAHEMMCMATFEHEMEKA 695
Query: 261 FAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKS 320
FA Q S+D VC ICMEVVYEK + SERRFGILSNCNHTYCL CIR+WR AKQFE+ IIKS
Sbjct: 696 FAFQASQDKVCSICMEVVYEKPSASERRFGILSNCNHTYCLSCIRQWRCAKQFENPIIKS 875
Query: 321 CPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKH 380
CPECR+ S FVIPS YWV + KPC+YF++G+G+CPFGG C Y H
Sbjct: 876 CPECRVISEFVIPSAYWVEDQEKKNELIEAFKQGVGKKPCKYFEQGKGTCPFGGKCLYLH 1055
Query: 381 AYPDGRQEEPQRPKAQRRN----------RFWEFIEERENGDPFETDE 418
AYPDG + EP++P+ Q + R W+FIE+RE+ TD+
Sbjct: 1056AYPDGTRAEPEKPRKQLSSEGTVRFFNSVRLWDFIEDRESRTVTSTDD 1199
Score = 88.6 bits (218), Expect = 1e-15
Identities = 34/55 (61%), Positives = 45/55 (81%)
Frame = +3
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTK 103
TKQVTCRY++ GVC+EG C +SHDLS+ +S+ VC+YYQ+G CAYG CRY+H +
Sbjct: 24 TKQVTCRYYVQGVCREGSKCLFSHDLSSSKSSTVCKYYQKGQCAYGARCRYDHIR 188
>dbj|AK011295.1|AK011295 Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:2610002L04:MAKORIN RING
ZINC-FINGER PROTEIN 2, full insert sequence
Length = 2219
Score = 285 bits (728), Expect = 8e-75
Identities = 128/230 (55%), Positives = 157/230 (67%), Gaps = 10/230 (4%)
Frame = +1
Query: 202 QLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSF 261
QLCPYAA GECR+G+ CVY+HGD+C++C LQVLHP D QR H K C+ E +ME +F
Sbjct: 535 QLCPYAAAGECRFGDACVYLHGDMCEICRLQVLHPFDPEQRKAHEKMCMSTFEHEMEKAF 714
Query: 262 AVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSC 321
A Q S+D VC ICMEV+ EKA+ SERRFGILSNC+HTYCL CIR+WR AKQFE+ IIKSC
Sbjct: 715 AFQASQDKVCSICMEVILEKASASERRFGILSNCSHTYCLSCIRQWRCAKQFENPIIKSC 894
Query: 322 PECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHA 381
PECR+ S FVIPS YWV M K C+YF++G+G+CPFG C Y+HA
Sbjct: 895 PECRVISEFVIPSVYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYRHA 1074
Query: 382 YPDGRQEEPQRPKAQRRN----------RFWEFIEERENGDPFETDEDEV 421
YPDGR EP++P+ Q + R W+FIE RE TD+ +V
Sbjct: 1075YPDGRLAEPEKPRKQLSSEGTVRFFNSVRLWDFIENRETRQVPSTDDVDV 1224
Score = 97.1 bits (240), Expect = 3e-18
Identities = 37/56 (66%), Positives = 46/56 (82%)
Frame = +1
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
TKQVTCRYFMHGVC+EG C +SHDL+ + + +C+YYQ+G CAYG CRY+HTKP
Sbjct: 37 TKQVTCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGARCRYDHTKP 204
>ref|NM_023290.1| Mus musculus makorin, ring finger protein, 2 (Mkrn2), mRNA
Length = 2217
Score = 283 bits (724), Expect = 2e-74
Identities = 128/230 (55%), Positives = 156/230 (67%), Gaps = 10/230 (4%)
Frame = +2
Query: 202 QLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSF 261
QLCPYAA GECR G+ CVY+HGD+C++C LQVLHP D QR H K C+ E +ME +F
Sbjct: 524 QLCPYAAAGECRLGDACVYLHGDMCEICRLQVLHPFDPEQRKAHEKMCMSTFEHEMEKAF 703
Query: 262 AVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSC 321
A Q S+D VC ICMEV+ EKA+ SERRFGILSNC+HTYCL CIR+WR AKQFE+ IIKSC
Sbjct: 704 AFQASQDKVCSICMEVILEKASASERRFGILSNCSHTYCLSCIRQWRCAKQFENPIIKSC 883
Query: 322 PECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHA 381
PECR+ S FVIPS YWV M K C+YF++G+G+CPFG C Y+HA
Sbjct: 884 PECRVISEFVIPSVYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYRHA 1063
Query: 382 YPDGRQEEPQRPKAQRRN----------RFWEFIEERENGDPFETDEDEV 421
YPDGR EP++P+ Q + R W+FIE RE TD+ +V
Sbjct: 1064YPDGRLAEPEKPRKQLSSEGTVRFFNSVRLWDFIENRETRQVPSTDDVDV 1213
Score = 97.1 bits (240), Expect = 3e-18
Identities = 37/56 (66%), Positives = 46/56 (82%)
Frame = +2
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
TKQVTCRYFMHGVC+EG C +SHDL+ + + +C+YYQ+G CAYG CRY+HTKP
Sbjct: 26 TKQVTCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGARCRYDHTKP 193
>gb|AF277171.1|AF277171 Mus musculus Makorin RING zinc-finger protein 2 (Mkrn2) mRNA,
complete cds
Length = 2217
Score = 283 bits (724), Expect = 2e-74
Identities = 128/230 (55%), Positives = 156/230 (67%), Gaps = 10/230 (4%)
Frame = +2
Query: 202 QLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSF 261
QLCPYAA GECR G+ CVY+HGD+C++C LQVLHP D QR H K C+ E +ME +F
Sbjct: 524 QLCPYAAAGECRLGDACVYLHGDMCEICRLQVLHPFDPEQRKAHEKMCMSTFEHEMEKAF 703
Query: 262 AVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSC 321
A Q S+D VC ICMEV+ EKA+ SERRFGILSNC+HTYCL CIR+WR AKQFE+ IIKSC
Sbjct: 704 AFQASQDKVCSICMEVILEKASASERRFGILSNCSHTYCLSCIRQWRCAKQFENPIIKSC 883
Query: 322 PECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHA 381
PECR+ S FVIPS YWV M K C+YF++G+G+CPFG C Y+HA
Sbjct: 884 PECRVISEFVIPSVYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYRHA 1063
Query: 382 YPDGRQEEPQRPKAQRRN----------RFWEFIEERENGDPFETDEDEV 421
YPDGR EP++P+ Q + R W+FIE RE TD+ +V
Sbjct: 1064YPDGRLAEPEKPRKQLSSEGTVRFFNSVRLWDFIENRETRQVPSTDDVDV 1213
Score = 97.1 bits (240), Expect = 3e-18
Identities = 37/56 (66%), Positives = 46/56 (82%)
Frame = +2
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
TKQVTCRYFMHGVC+EG C +SHDL+ + + +C+YYQ+G CAYG CRY+HTKP
Sbjct: 26 TKQVTCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGARCRYDHTKP 193
>gb|BC001799.1|BC001799 Homo sapiens, clone IMAGE:3354600, mRNA, partial cds
Length = 2620
Score = 283 bits (723), Expect = 3e-74
Identities = 126/221 (57%), Positives = 155/221 (70%), Gaps = 10/221 (4%)
Frame = +2
Query: 200 KKQLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMEL 259
++QLCPYAA GECR+G+ CVY+HG+VC++C LQVLHP D QR H K C+ E +ME
Sbjct: 371 EQQLCPYAAAGECRFGDACVYLHGEVCEICRLQVLHPFDPEQRKAHEKICMLTFEHEMEK 550
Query: 260 SFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIK 319
+FA Q S+D VC ICMEV+ EKA+ SERRFGILSNCNHTYCL CIR+WR AKQFE+ IIK
Sbjct: 551 AFAFQASQDKVCSICMEVILEKASASERRFGILSNCNHTYCLSCIRQWRCAKQFENPIIK 730
Query: 320 SCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYK 379
SCPECR+ S FVIPS YWV M K C+YF++G+G+CPFG C Y+
Sbjct: 731 SCPECRVISEFVIPSVYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYR 910
Query: 380 HAYPDGRQEEPQRPKAQRRN----------RFWEFIEEREN 410
HAYPDGR EP++P+ Q + R W+FIE RE+
Sbjct: 911 HAYPDGRLAEPEKPRKQLSSQGTVRFFNSVRLWDFIENRES 1033
>gb|BC015715.1|BC015715 Homo sapiens, clone MGC:16931 IMAGE:3916199, mRNA, complete cds
Length = 2801
Score = 283 bits (723), Expect = 3e-74
Identities = 126/221 (57%), Positives = 155/221 (70%), Gaps = 10/221 (4%)
Frame = +2
Query: 200 KKQLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMEL 259
++QLCPYAA GECR+G+ CVY+HG+VC++C LQVLHP D QR H K C+ E +ME
Sbjct: 578 EQQLCPYAAAGECRFGDACVYLHGEVCEICRLQVLHPFDPEQRKAHEKICMLTFEHEMEK 757
Query: 260 SFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIK 319
+FA Q S+D VC ICMEV+ EKA+ SERRFGILSNCNHTYCL CIR+WR AKQFE+ IIK
Sbjct: 758 AFAFQASQDKVCSICMEVILEKASASERRFGILSNCNHTYCLSCIRQWRCAKQFENPIIK 937
Query: 320 SCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYK 379
SCPECR+ S FVIPS YWV M K C+YF++G+G+CPFG C Y+
Sbjct: 938 SCPECRVISEFVIPSVYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYR 1117
Query: 380 HAYPDGRQEEPQRPKAQRRN----------RFWEFIEEREN 410
HAYPDGR EP++P+ Q + R W+FIE RE+
Sbjct: 1118HAYPDGRLAEPEKPRKQLSSQGTVRFFNSVRLWDFIENRES 1240
Score = 95.9 bits (237), Expect = 7e-18
Identities = 35/56 (62%), Positives = 46/56 (81%)
Frame = +2
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
TKQ+TCRYFMHGVC+EG C +SHDL+ + + +C+YYQ+G CAYG CRY+HT+P
Sbjct: 86 TKQITCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGTRCRYDHTRP 253
>ref|XM_051580.2| Homo sapiens makorin, ring finger protein, 2 (MKRN2), mRNA
Length = 2762
Score = 283 bits (723), Expect = 3e-74
Identities = 126/221 (57%), Positives = 155/221 (70%), Gaps = 10/221 (4%)
Frame = +2
Query: 200 KKQLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMEL 259
++QLCPYAA GECR+G+ CVY+HG+VC++C LQVLHP D QR H K C+ E +ME
Sbjct: 554 EQQLCPYAAAGECRFGDACVYLHGEVCEICRLQVLHPFDPEQRKAHEKICMLTFEHEMEK 733
Query: 260 SFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIK 319
+FA Q S+D VC ICMEV+ EKA+ SERRFGILSNCNHTYCL CIR+WR AKQFE+ IIK
Sbjct: 734 AFAFQASQDKVCSICMEVILEKASASERRFGILSNCNHTYCLSCIRQWRCAKQFENPIIK 913
Query: 320 SCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYK 379
SCPECR+ S FVIPS YWV M K C+YF++G+G+CPFG C Y+
Sbjct: 914 SCPECRVISEFVIPSVYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYR 1093
Query: 380 HAYPDGRQEEPQRPKAQRRN----------RFWEFIEEREN 410
HAYPDGR EP++P+ Q + R W+FIE RE+
Sbjct: 1094HAYPDGRLAEPEKPRKQLSSQGTVRFFNSVRLWDFIENRES 1216
Score = 95.9 bits (237), Expect = 7e-18
Identities = 35/56 (62%), Positives = 46/56 (81%)
Frame = +2
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
TKQ+TCRYFMHGVC+EG C +SHDL+ + + +C+YYQ+G CAYG CRY+HT+P
Sbjct: 62 TKQITCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGTRCRYDHTRP 229
>gb|AF161555.2|AF161555 Homo sapiens HSPC070 mRNA, complete cds
Length = 3050
Score = 281 bits (719), Expect = 9e-74
Identities = 125/221 (56%), Positives = 155/221 (69%), Gaps = 10/221 (4%)
Frame = +2
Query: 200 KKQLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMEL 259
++QLCPYAA GECR+G+ CVY+HG+VC++C LQVLHP D QR H K C+ E +ME
Sbjct: 830 EQQLCPYAAAGECRFGDACVYLHGEVCEICRLQVLHPFDPEQRKAHEKICMLTFEHEMEK 1009
Query: 260 SFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIK 319
+FA Q S+D VC ICMEV+ EKA+ SERRFGILSNCNHTYCL CIR+WR A+QFE+ IIK
Sbjct: 1010 AFAFQASQDKVCSICMEVILEKASASERRFGILSNCNHTYCLSCIRQWRCAEQFENPIIK 1189
Query: 320 SCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYK 379
SCPECR+ S FVIPS YWV M K C+YF++G+G+CPFG C Y+
Sbjct: 1190 SCPECRVISEFVIPSVYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYR 1369
Query: 380 HAYPDGRQEEPQRPKAQRRN----------RFWEFIEEREN 410
HAYPDGR EP++P+ Q + R W+FIE RE+
Sbjct: 1370 HAYPDGRLAEPEKPRKQLSSQGTVRFFNSVRLWDFIENRES 1492
Score = 95.9 bits (237), Expect = 7e-18
Identities = 35/56 (62%), Positives = 46/56 (81%)
Frame = +2
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
TKQ+TCRYFMHGVC+EG C +SHDL+ + + +C+YYQ+G CAYG CRY+HT+P
Sbjct: 338 TKQITCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGTRCRYDHTRP 505
>ref|NM_014160.2| Homo sapiens HSPC070 protein (HSPC070), mRNA
Length = 3050
Score = 281 bits (719), Expect = 9e-74
Identities = 125/221 (56%), Positives = 155/221 (69%), Gaps = 10/221 (4%)
Frame = +2
Query: 200 KKQLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMEL 259
++QLCPYAA GECR+G+ CVY+HG+VC++C LQVLHP D QR H K C+ E +ME
Sbjct: 830 EQQLCPYAAAGECRFGDACVYLHGEVCEICRLQVLHPFDPEQRKAHEKICMLTFEHEMEK 1009
Query: 260 SFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIK 319
+FA Q S+D VC ICMEV+ EKA+ SERRFGILSNCNHTYCL CIR+WR A+QFE+ IIK
Sbjct: 1010 AFAFQASQDKVCSICMEVILEKASASERRFGILSNCNHTYCLSCIRQWRCAEQFENPIIK 1189
Query: 320 SCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYK 379
SCPECR+ S FVIPS YWV M K C+YF++G+G+CPFG C Y+
Sbjct: 1190 SCPECRVISEFVIPSVYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYR 1369
Query: 380 HAYPDGRQEEPQRPKAQRRN----------RFWEFIEEREN 410
HAYPDGR EP++P+ Q + R W+FIE RE+
Sbjct: 1370 HAYPDGRLAEPEKPRKQLSSQGTVRFFNSVRLWDFIENRES 1492
Score = 95.9 bits (237), Expect = 7e-18
Identities = 35/56 (62%), Positives = 46/56 (81%)
Frame = +2
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
TKQ+TCRYFMHGVC+EG C +SHDL+ + + +C+YYQ+G CAYG CRY+HT+P
Sbjct: 338 TKQITCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGTRCRYDHTRP 505
>gb|AF302084.1|AF302084 Homo sapiens MAKORIN2 (MKRN2) mRNA, complete cds
Length = 2758
Score = 281 bits (718), Expect = 1e-73
Identities = 125/221 (56%), Positives = 154/221 (69%), Gaps = 10/221 (4%)
Frame = +1
Query: 200 KKQLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMEL 259
++QLCPYAA GECR+G+ C Y+HG+VC++C LQVLHP D QR H K C+ E +ME
Sbjct: 550 EQQLCPYAAAGECRFGDACFYLHGEVCEICRLQVLHPFDPEQRKAHEKICMLTFEHEMEK 729
Query: 260 SFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIK 319
+FA Q S+D VC ICMEV+ EKA+ SERRFGILSNCNHTYCL CIR+WR AKQFE+ IIK
Sbjct: 730 AFAFQASQDKVCSICMEVILEKASASERRFGILSNCNHTYCLSCIRQWRCAKQFENPIIK 909
Query: 320 SCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYK 379
SCPECR+ S FVIPS YWV M K C+YF++G+G+CPFG C Y+
Sbjct: 910 SCPECRVISEFVIPSVYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYR 1089
Query: 380 HAYPDGRQEEPQRPKAQRRN----------RFWEFIEEREN 410
HAYPDGR EP++P+ Q + R W+FIE RE+
Sbjct: 1090HAYPDGRLAEPEKPRKQLSSQGTVRFFNSVRLWDFIENRES 1212
Score = 95.9 bits (237), Expect = 7e-18
Identities = 35/56 (62%), Positives = 46/56 (81%)
Frame = +1
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
TKQ+TCRYFMHGVC+EG C +SHDL+ + + +C+YYQ+G CAYG CRY+HT+P
Sbjct: 58 TKQITCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGTRCRYDHTRP 225
>dbj|AB049438.1|AB049438 Seriola quinqueradiata YGHL2 mRNA for ring zinc finger protein
MAKORIN2, complete cds, clone:pMYGHL2-L621
Length = 2212
Score = 279 bits (713), Expect = 5e-73
Identities = 127/218 (58%), Positives = 150/218 (68%), Gaps = 10/218 (4%)
Frame = +3
Query: 202 QLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSF 261
QLCPYAA G C Y ENC Y+HGD+C++CGLQVLHP D+ QR H K C+ A E DME +F
Sbjct: 1116 QLCPYAANGHCFYEENCTYLHGDLCEVCGLQVLHPHDSEQRRAHEKMCLAAFEADMEKAF 1295
Query: 262 AVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSC 321
A Q S+D VC ICMEVV +KANPS+RRFGILS+C HT+CL CIRKWR + F + IIKSC
Sbjct: 1296 AAQLSQDKVCSICMEVVVQKANPSDRRFGILSSCCHTFCLACIRKWRCTRTFSNTIIKSC 1475
Query: 322 PECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHA 381
PECR+ S FVIPS YWV +S K C+YFD+GRGSCPFGG C Y HA
Sbjct: 1476 PECRVVSEFVIPSVYWVEDQEDKDHLIDLFKSGVSKKACKYFDQGRGSCPFGGKCLYLHA 1655
Query: 382 YPDGRQEEPQRPKAQRRN----------RFWEFIEERE 409
+PDG + EP RP+ Q + R W+FIEERE
Sbjct: 1656 FPDGTRAEPDRPRKQLSSEGNVRFMNSVRLWDFIEERE 1769
Score = 117 bits (294), Expect = 2e-24
Identities = 54/109 (49%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Frame = +3
Query: 311 KQFESKIIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSC 370
+ F + IIKSCPECR+ S FVIPS YWV +S K C+YFD+GRGSC
Sbjct: 3 RTFSNTIIKSCPECRVVSEFVIPSVYWVEDQEDKDHLIDLFKSGVSKKVCKYFDQGRGSC 182
Query: 371 PFGGNCFYKHAYPDGRQEEPQRPKAQRRN----------RFWEFIEERE 409
PFGG C Y HA+PDG + EP RP+ Q + R W+FIEERE
Sbjct: 183 PFGGKCLYLHAFPDGTRAEPDRPRKQLSSEGNVRFMNSVRLWDFIEERE 329
Score = 95.1 bits (235), Expect = 1e-17
Identities = 35/56 (62%), Positives = 46/56 (81%)
Frame = +3
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
TKQVTCRYF+HGVC+EG C +SHDL+ + + +C++YQRG CAYG+ CRY+H KP
Sbjct: 627 TKQVTCRYFLHGVCREGSRCLFSHDLNNSKPSTICKFYQRGVCAYGERCRYDHIKP 794
>dbj|AB078011.1|AB078011 Seriola quinqueradiata mRNA for Makorin ring finger protein 2,
complete cds, clone:pYGHL2full
Length = 3115
Score = 279 bits (713), Expect = 5e-73
Identities = 127/218 (58%), Positives = 150/218 (68%), Gaps = 10/218 (4%)
Frame = +3
Query: 202 QLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSF 261
QLCPYAA G C Y ENC Y+HGD+C++CGLQVLHP D+ QR H K C+ A E DME +F
Sbjct: 573 QLCPYAANGHCFYEENCTYLHGDLCEVCGLQVLHPHDSEQRRAHEKMCLAAFEADMEKAF 752
Query: 262 AVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSC 321
A Q S+D VC ICMEVV +KANPS+RRFGILS+C HT+CL CIRKWR + F + IIKSC
Sbjct: 753 AAQLSQDKVCSICMEVVVQKANPSDRRFGILSSCCHTFCLACIRKWRCTRTFSNTIIKSC 932
Query: 322 PECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHA 381
PECR+ S FVIPS YWV +S K C+YFD+GRGSCPFGG C Y HA
Sbjct: 933 PECRVVSEFVIPSVYWVEDQEDKDHLIDLFKSGVSKKACKYFDQGRGSCPFGGKCLYLHA 1112
Query: 382 YPDGRQEEPQRPKAQRRN----------RFWEFIEERE 409
+PDG + EP RP+ Q + R W+FIEERE
Sbjct: 1113FPDGTRAEPDRPRKQLSSEGNVRFMNSVRLWDFIEERE 1226
Score = 95.1 bits (235), Expect = 1e-17
Identities = 35/56 (62%), Positives = 46/56 (81%)
Frame = +3
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
TKQVTCRYF+HGVC+EG C +SHDL+ + + +C++YQRG CAYG+ CRY+H KP
Sbjct: 84 TKQVTCRYFLHGVCREGSRCLFSHDLNNSKPSTICKFYQRGVCAYGERCRYDHIKP 251
>dbj|AB049436.1|AB049436 Seriola quinqueradiata YGHL2 mRNA for ring zinc finger protein
MAKORIN2, complete cds, clone:pMYGHL2-L72
Length = 1663
Score = 279 bits (713), Expect = 5e-73
Identities = 127/218 (58%), Positives = 150/218 (68%), Gaps = 10/218 (4%)
Frame = +3
Query: 202 QLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSF 261
QLCPYAA G C Y ENC Y+HGD+C++CGLQVLHP D+ QR H K C+ A E DME +F
Sbjct: 567 QLCPYAANGHCFYEENCTYLHGDLCEVCGLQVLHPHDSEQRRAHEKMCLAAFEADMEKAF 746
Query: 262 AVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSC 321
A Q S+D VC ICMEVV +KANPS+RRFGILS+C HT+CL CIRKWR + F + IIKSC
Sbjct: 747 AAQLSQDKVCSICMEVVVQKANPSDRRFGILSSCCHTFCLACIRKWRCTRTFSNTIIKSC 926
Query: 322 PECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHA 381
PECR+ S FVIPS YWV +S K C+YFD+GRGSCPFGG C Y HA
Sbjct: 927 PECRVVSEFVIPSVYWVEDQEDKDHLIDLFKSGVSKKACKYFDQGRGSCPFGGKCLYLHA 1106
Query: 382 YPDGRQEEPQRPKAQRRN----------RFWEFIEERE 409
+PDG + EP RP+ Q + R W+FIEERE
Sbjct: 1107FPDGTRAEPDRPRKQLSSEGNVRFMNSVRLWDFIEERE 1220
Score = 95.1 bits (235), Expect = 1e-17
Identities = 35/56 (62%), Positives = 46/56 (81%)
Frame = +3
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
TKQVTCRYF+HGVC+EG C +SHDL+ + + +C++YQRG CAYG+ CRY+H KP
Sbjct: 78 TKQVTCRYFLHGVCREGSRCLFSHDLNNSKPSTICKFYQRGVCAYGERCRYDHIKP 245
>dbj|AB049437.1|AB049437 Seriola quinqueradiata YGHL2 mRNA for ring zinc finger protein
MAKORIN2, complete cds, clone:pMYGHL2-S72
Length = 1407
Score = 279 bits (713), Expect = 5e-73
Identities = 127/218 (58%), Positives = 150/218 (68%), Gaps = 10/218 (4%)
Frame = +3
Query: 202 QLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSF 261
QLCPYAA G C Y ENC Y+HGD+C++CGLQVLHP D+ QR H K C+ A E DME +F
Sbjct: 567 QLCPYAANGHCFYEENCTYLHGDLCEVCGLQVLHPHDSEQRRAHEKMCLAAFEADMEKAF 746
Query: 262 AVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSC 321
A Q S+D VC ICMEVV +KANPS+RRFGILS+C HT+CL CIRKWR + F + IIKSC
Sbjct: 747 AAQLSQDKVCSICMEVVVQKANPSDRRFGILSSCCHTFCLACIRKWRCTRTFSNTIIKSC 926
Query: 322 PECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHA 381
PECR+ S FVIPS YWV +S K C+YFD+GRGSCPFGG C Y HA
Sbjct: 927 PECRVVSEFVIPSVYWVEDQEDKDHLIDLFKSGVSKKACKYFDQGRGSCPFGGKCLYLHA 1106
Query: 382 YPDGRQEEPQRPKAQRRN----------RFWEFIEERE 409
+PDG + EP RP+ Q + R W+FIEERE
Sbjct: 1107FPDGTRAEPDRPRKQLSSEGNVRFMNSVRLWDFIEERE 1220
Score = 95.1 bits (235), Expect = 1e-17
Identities = 35/56 (62%), Positives = 46/56 (81%)
Frame = +3
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
TKQVTCRYF+HGVC+EG C +SHDL+ + + +C++YQRG CAYG+ CRY+H KP
Sbjct: 78 TKQVTCRYFLHGVCREGSRCLFSHDLNNSKPSTICKFYQRGVCAYGERCRYDHIKP 245
>dbj|AB049439.1|AB049439 Seriola quinqueradiata YGHL2 mRNA for ring zinc finger protein
MAKORIN2, complete cds, clone:pMYGHL2-S621
Length = 1956
Score = 279 bits (713), Expect = 5e-73
Identities = 127/218 (58%), Positives = 150/218 (68%), Gaps = 10/218 (4%)
Frame = +3
Query: 202 QLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSF 261
QLCPYAA G C Y ENC Y+HGD+C++CGLQVLHP D+ QR H K C+ A E DME +F
Sbjct: 1116 QLCPYAANGHCFYEENCTYLHGDLCEVCGLQVLHPHDSEQRRAHEKMCLAAFEADMEKAF 1295
Query: 262 AVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSC 321
A Q S+D VC ICMEVV +KANPS+RRFGILS+C HT+CL CIRKWR + F + IIKSC
Sbjct: 1296 AAQLSQDKVCSICMEVVVQKANPSDRRFGILSSCCHTFCLACIRKWRCTRTFSNTIIKSC 1475
Query: 322 PECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHA 381
PECR+ S FVIPS YWV +S K C+YFD+GRGSCPFGG C Y HA
Sbjct: 1476 PECRVVSEFVIPSVYWVEDQEDKDHLIDLFKSGVSKKACKYFDQGRGSCPFGGKCLYLHA 1655
Query: 382 YPDGRQEEPQRPKAQRRN----------RFWEFIEERE 409
+PDG + EP RP+ Q + R W+FIEERE
Sbjct: 1656 FPDGTRAEPDRPRKQLSSEGNVRFMNSVRLWDFIEERE 1769
Score = 117 bits (294), Expect = 2e-24
Identities = 54/109 (49%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
Frame = +3
Query: 311 KQFESKIIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSC 370
+ F + IIKSCPECR+ S FVIPS YWV +S K C+YFD+GRGSC
Sbjct: 3 RTFSNTIIKSCPECRVVSEFVIPSVYWVEDQEDKDHLIDLFKSGVSKKVCKYFDQGRGSC 182
Query: 371 PFGGNCFYKHAYPDGRQEEPQRPKAQRRN----------RFWEFIEERE 409
PFGG C Y HA+PDG + EP RP+ Q + R W+FIEERE
Sbjct: 183 PFGGKCLYLHAFPDGTRAEPDRPRKQLSSEGNVRFMNSVRLWDFIEERE 329
Score = 95.1 bits (235), Expect = 1e-17
Identities = 35/56 (62%), Positives = 46/56 (81%)
Frame = +3
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
TKQVTCRYF+HGVC+EG C +SHDL+ + + +C++YQRG CAYG+ CRY+H KP
Sbjct: 627 TKQVTCRYFLHGVCREGSRCLFSHDLNNSKPSTICKFYQRGVCAYGERCRYDHIKP 794
>dbj|D85881.2|SEQPYGHL2B Seriola quinqueradiata GHL2 mRNA for YGHL2, complete cds
Length = 1589
Score = 279 bits (713), Expect = 5e-73
Identities = 127/218 (58%), Positives = 150/218 (68%), Gaps = 10/218 (4%)
Frame = +3
Query: 202 QLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSF 261
QLCPYAA G C Y ENC Y+HGD+C++CGLQVLHP D+ QR H K C+ A E DME +F
Sbjct: 492 QLCPYAANGHCFYEENCTYLHGDLCEVCGLQVLHPHDSEQRRAHEKMCLAAFEADMEKAF 671
Query: 262 AVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSC 321
A Q S+D VC ICMEVV +KANPS+RRFGILS+C HT+CL CIRKWR + F + IIKSC
Sbjct: 672 AAQLSQDKVCSICMEVVVQKANPSDRRFGILSSCCHTFCLACIRKWRCTRTFSNTIIKSC 851
Query: 322 PECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHA 381
PECR+ S FVIPS YWV +S K C+YFD+GRGSCPFGG C Y HA
Sbjct: 852 PECRVVSEFVIPSVYWVEDQEDKDHLIDLFKSGVSKKACKYFDQGRGSCPFGGKCLYLHA 1031
Query: 382 YPDGRQEEPQRPKAQRRN----------RFWEFIEERE 409
+PDG + EP RP+ Q + R W+FIEERE
Sbjct: 1032FPDGTRAEPDRPRKQLSSEGNVRFMNNVRLWDFIEERE 1145
Score = 95.1 bits (235), Expect = 1e-17
Identities = 35/56 (62%), Positives = 46/56 (81%)
Frame = +3
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
TKQVTCRYF+HGVC+EG C +SHDL+ + + +C++YQRG CAYG+ CRY+H KP
Sbjct: 3 TKQVTCRYFLHGVCREGSRCLFSHDLNNSKPSTICKFYQRGVCAYGERCRYDHIKP 170
>dbj|AB032769.1|AB032769 Seriola quinqueradiata mRNA for zinc finger protein YGHLC3HC4,
partial cds
Length = 1588
Score = 279 bits (713), Expect = 5e-73
Identities = 127/218 (58%), Positives = 150/218 (68%), Gaps = 10/218 (4%)
Frame = +3
Query: 202 QLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSF 261
QLCPYAA G C Y ENC Y+HGD+C++CGLQVLHP D+ QR H K C+ A E DME +F
Sbjct: 492 QLCPYAANGHCFYEENCTYLHGDLCEVCGLQVLHPHDSEQRRAHEKMCLAAFEADMEKAF 671
Query: 262 AVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSC 321
A Q S+D VC ICMEVV +KANPS+RRFGILS+C HT+CL CIRKWR + F + IIKSC
Sbjct: 672 AAQLSQDKVCSICMEVVVQKANPSDRRFGILSSCCHTFCLACIRKWRCTRTFSNTIIKSC 851
Query: 322 PECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHA 381
PECR+ S FVIPS YWV +S K C+YFD+GRGSCPFGG C Y HA
Sbjct: 852 PECRVVSEFVIPSVYWVEDQEDKDHLIDLFKSGVSKKACKYFDQGRGSCPFGGKCLYLHA 1031
Query: 382 YPDGRQEEPQRPKAQRRN----------RFWEFIEERE 409
+PDG + EP RP+ Q + R W+FIEERE
Sbjct: 1032FPDGTRAEPDRPRKQLSSEGNVRFMNSVRLWDFIEERE 1145
Score = 95.1 bits (235), Expect = 1e-17
Identities = 35/56 (62%), Positives = 46/56 (81%)
Frame = +3
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
TKQVTCRYF+HGVC+EG C +SHDL+ + + +C++YQRG CAYG+ CRY+H KP
Sbjct: 3 TKQVTCRYFLHGVCREGSRCLFSHDLNNSKPSTICKFYQRGVCAYGERCRYDHIKP 170
>ref|XM_060890.1| Homo sapiens similar to makorin, ring finger protein, 1 (H.
sapiens) (LOC128221), mRNA
Length = 651
Score = 265 bits (678), Expect = 5e-69
Identities = 131/205 (63%), Positives = 140/205 (67%), Gaps = 8/205 (3%)
Frame = +1
Query: 257 MELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESK 316
MELS AVQ SKD+VCGICME VYEKANPS+ F ILSN NHTY LKCI KWRSAKQFESK
Sbjct: 1 MELSLAVQHSKDLVCGICMEAVYEKANPSKCHFRILSNGNHTYSLKCICKWRSAKQFESK 180
Query: 317 IIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNC 376
IIKSCPEC ITSNFVIPSEYW AM NK CRYFD+ GSCPFGGNC
Sbjct: 181 IIKSCPECHITSNFVIPSEYWEEEKEEKQKLIQKYKEAMRNKACRYFDKEHGSCPFGGNC 360
Query: 377 FYKHAYPDGRQEEPQRPK--------AQRRNRFWEFIEERENGDPFETDEDEVVTFXXXX 428
FYKH YPDG ++EPQR K AQ+RN FWE IEEREN +P + DE+EVVT
Sbjct: 361 FYKHVYPDGHRKEPQRQKVGTSSRYWAQQRNHFWELIEERENSNPSDNDEEEVVTSELGK 540
Query: 429 XXXXXXXXXXXXXXTDSEDEWDLFH 453
TDSEDEWDLFH
Sbjct: 541 MLLMLWAAGRDDRLTDSEDEWDLFH 615
>ref|XM_071121.1| Homo sapiens similar to makorin, ring finger protein, 1
(LOC138817), mRNA
Length = 912
Score = 264 bits (674), Expect = 2e-68
Identities = 168/359 (46%), Positives = 185/359 (50%), Gaps = 2/359 (0%)
Frame = +1
Query: 97 CRYEHTKPLMQEEELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGAEDW 156
CRYEH+KPL QEE T + + +LL + VG
Sbjct: 61 CRYEHSKPLKQEEAAATELTTISSLAASSSLL--------------------SLVGPLVE 180
Query: 157 VNAVEFVPGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLC--PYAAVGECRY 214
+N A PSCT +K C AAV C
Sbjct: 181 MNT------------AVPSCTEAPLQDSVTKEESEK-------EKNCCGNQEAAVPLC-- 297
Query: 215 GENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGIC 274
C +VLHP+ AAQRSQHIK CIEAHEKDMELS AVQRSKD+V GIC
Sbjct: 298 --------------CSERVLHPMAAAQRSQHIKLCIEAHEKDMELSLAVQRSKDVVYGIC 435
Query: 275 MEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPS 334
MEVVYEKANPSE FGILSNCNH YCLKCIRKW SAKQF+SKIIKSC +C+ITSNFVIPS
Sbjct: 436 MEVVYEKANPSECCFGILSNCNHAYCLKCIRKWSSAKQFQSKIIKSCLDCQITSNFVIPS 615
Query: 335 EYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPK 394
E WV A+SNK CRYFDEGRGSCPFG NCFYKHAYPDG E+PQR K
Sbjct: 616 ESWV-EKEEKQKLIQKYKEALSNKACRYFDEGRGSCPFGRNCFYKHAYPDGLTEKPQRQK 792
Query: 395 AQRRNRFWEFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLFH 453
+ GD DE+ DSEDEWDLFH
Sbjct: 793 VGE----MLLMLLAAGGD------DEL---------------------ADSEDEWDLFH 876
>dbj|AK009515.1|AK009515 Mus musculus adult male tongue cDNA, RIKEN full-length enriched
library, clone:2310026N20:MAKORIN RING ZINC-FINGER
PROTEIN 2, full insert sequence
Length = 1626
Score = 258 bits (658), Expect(2) = 5e-68
Identities = 112/185 (60%), Positives = 134/185 (71%)
Frame = +1
Query: 202 QLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSF 261
QLCPYAA GECR+G+ CVY+HGD+C++C LQVLHP D QR H K C+ E +ME +F
Sbjct: 565 QLCPYAAAGECRFGDACVYLHGDMCEICRLQVLHPFDPEQRKAHEKMCMSTFEHEMEKAF 744
Query: 262 AVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSC 321
A Q S+D VC ICMEV E+A+ SERRFGILSNC+HTYCL CIR+WR AKQFE+ IIKSC
Sbjct: 745 AFQASQDKVCSICMEVSLERASASERRFGILSNCSHTYCLSCIRQWRCAKQFENPIIKSC 924
Query: 322 PECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHA 381
ECR+ S FVIPS YWV M K C+YF++G+G+CPFG C Y+HA
Sbjct: 925 SECRVISEFVIPSVYWVEDQNKKNELIEAFKQGMGKKACKYFEQGKGTCPFGSKCLYRHA 1104
Query: 382 YPDGR 386
YPDGR
Sbjct: 1105YPDGR 1119
Score = 97.1 bits (240), Expect = 3e-18
Identities = 37/56 (66%), Positives = 46/56 (82%)
Frame = +1
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
TKQVTCRYFMHGVC+EG C +SHDL+ + + +C+YYQ+G CAYG CRY+HTKP
Sbjct: 67 TKQVTCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGARCRYDHTKP 234
Score = 26.6 bits (57), Expect(2) = 5e-68
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 10/43 (23%)
Frame = +3
Query: 389 EPQRPKAQRRN----------RFWEFIEERENGDPFETDEDEV 421
EP++P+ Q + R W+FIE RE TD+ +V
Sbjct: 1125 EPEKPRKQLSSEGTVRFFNSVRLWDFIENRETRQVPSTDDVDV 1253
>emb|AL031686.2|HS981L23 Human DNA sequence from clone RP5-981L23 on chromosome 20q12.1-13.2.
Contains the 5' end of the gene for a novel protein
similar to KIAA0281 and Drosophila CG5336, a Krueppel type
zinc-finger protein pseudogene, a Makorin (MKRN1 or MKRN3)
ring finger p>
Length = 94817
Score = 179 bits (455), Expect(2) = 2e-67
Identities = 106/199 (53%), Positives = 118/199 (59%), Gaps = 9/199 (4%)
Frame = -1
Query: 147 AAAGVGAEDWVNAVEFVPGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQL--- 203
A GVG+EDWV+AVEFVPGQ YC P KQL
Sbjct: 61172 ATVGVGSEDWVDAVEFVPGQLYCSVHCP--------------FLQ*PRENQRKSKQL**Q 61035
Query: 204 --CPYAAVGECRYGENCVYIHGDVCDMCG----LQVLHPIDAAQRSQHIKSCIEAHEKDM 257
P G G NCVY+H + CD LQ + P D + KSC EAHEK+
Sbjct: 61034 AALPLGCSGRDGNG*NCVYLHRESCDHVSCRSYLQWMLPRDHSI*----KSCPEAHEKET 60867
Query: 258 ELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKI 317
ELSFAVQ SKD +CGICMEVV EKA+PSER FGILS+C+H YCLK I KW+ K FESKI
Sbjct: 60866 ELSFAVQCSKDTMCGICMEVVCEKASPSERGFGILSSCSHAYCLKYIHKWKGTKLFESKI 60687
Query: 318 IKSCPECRITSNFVIPSEY 336
I S PECRITSNFVIPSEY
Sbjct: 60686 IVSYPECRITSNFVIPSEY 60630
Score = 102 bits (254), Expect(2) = 2e-67
Identities = 53/104 (50%), Positives = 64/104 (60%), Gaps = 4/104 (3%)
Frame = -2
Query: 354 AMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPK----AQRRNRFWEFIEERE 409
AMS++ CR FDEG+GSCP G CFYK +PDG +++ QR AQ RN F E IEERE
Sbjct: 60580 AMSSQACRDFDEGQGSCPSWGMCFYKQVFPDGHRKDTQRQANRYWAQ*RNHFSELIEERE 60401
Query: 410 NGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLFH 453
N DPF+ +E+EVVTF TD E+EWDLFH
Sbjct: 60400 NNDPFDNNEEEVVTF-ELGEMLLMLLADGDDELTDFENEWDLFH 60272
Score = 84.0 bits (206), Expect = 3e-14
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = -3
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPL 105
TKQVTC YF+HG+CKEG NCRY H LS +V +Y+QR C YG CR EH+KPL
Sbjct: 61470 TKQVTCWYFVHGICKEGHNCRYLHSLSDSPHGVVGKYFQRRYCVYGGRCRCEHSKPL 61300
>ref|XM_060891.2| Homo sapiens similar to makorin, ring finger protein, 1
(LOC128222), mRNA
Length = 2088
Score = 247 bits (631), Expect = 1e-63
Identities = 120/175 (68%), Positives = 129/175 (73%), Gaps = 8/175 (4%)
Frame = +1
Query: 257 MELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESK 316
MELS AVQ SKD+VCGICME VYEKANPS+ F ILSN NHTY LKCI KWRSAKQFESK
Sbjct: 1 MELSLAVQHSKDLVCGICMEAVYEKANPSKCHFRILSNGNHTYSLKCICKWRSAKQFESK 180
Query: 317 IIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNC 376
IIKSCPEC ITSNFVIPSEYW AM NK CRYFD+ GSCPFGGNC
Sbjct: 181 IIKSCPECHITSNFVIPSEYWEEEKEEKQKLIQKYKEAMRNKACRYFDKEHGSCPFGGNC 360
Query: 377 FYKHAYPDGRQEEPQRPK--------AQRRNRFWEFIEERENGDPFETDEDEVVT 423
FYKH YPDG ++EPQR K AQ+RN FWE IEEREN +P + DE+EVVT
Sbjct: 361 FYKHVYPDGHRKEPQRQKVGTSSRYWAQQRNHFWELIEERENSNPSDNDEEEVVT 525
>ref|NM_079965.1| Drosophila melanogaster Makorin 1 (Mkrn1), mRNA
Length = 2237
Score = 228 bits (582), Expect = 7e-58
Identities = 126/368 (34%), Positives = 173/368 (46%), Gaps = 32/368 (8%)
Frame = +2
Query: 74 LSTGQSAMVCRYYQRGCCAYGDHCRYEHT----KPLMQEEELTTVNPAAKTYPSDLALLP 129
++ G+S +CRYY RG C +G+ CR+ H +P +E+ T V P T S
Sbjct: 233 MALGRSQTICRYYVRGICRFGELCRFSHDLSRGRPECEEQVATDVLPKPSTSSSS----- 397
Query: 130 ETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFVPGQPYCGRAAPSCTXXXXXXXXXXXX 189
A+ +W NA FVP Q A
Sbjct: 398 -----------TIGSRSASISSQQRNWANAPVFVPSQKRY-TAHEQSEFETTVDPEAVME 541
Query: 190 XXXXXXXXXMKKQLCPYAAVG---------------ECRYGENCVY-IHGDVCDMCGLQV 233
+ + VG C +GE Y IH ++C+MC
Sbjct: 542 AQAGASYDTLAPGVSWAEVVGGPSSLNKEDYGEENSSCAWGEFSAYPIHMELCEMCDQYC 721
Query: 234 LHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILS 293
LHP D QR H + C++ HE+ MELSFA+ RSKD CGIC + + EKA E+RFGIL
Sbjct: 722 LHPTDQVQRRSHNRECLQQHEQAMELSFAIARSKDKTCGICFDTIMEKAG-REKRFGILP 898
Query: 294 NCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXX 353
NCNH +CL+CIR WR AKQFE+KI ++CPECR+ S+FV PS +W+
Sbjct: 899 NCNHIFCLECIRTWRQAKQFENKITRACPECRVCSDFVCPSAFWMETKEEKDKLLNDYRA 1078
Query: 354 AMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQRRNR------------F 401
A+ K C+YF +G G CPFG CFYKHA P+G + PK R+ +
Sbjct: 1079ALGAKDCKYFKKGEGKCPFGNKCFYKHALPNGDIVDVGLPKRTRKLQSQNEIIDLLDIYL 1258
Query: 402 WEFIEERE 409
W++++ R+
Sbjct: 1259WDYVDRRD 1282
>gb|AY058694.1| Drosophila melanogaster LD41384 full length cDNA
Length = 2237
Score = 228 bits (582), Expect = 7e-58
Identities = 126/368 (34%), Positives = 173/368 (46%), Gaps = 32/368 (8%)
Frame = +2
Query: 74 LSTGQSAMVCRYYQRGCCAYGDHCRYEHT----KPLMQEEELTTVNPAAKTYPSDLALLP 129
++ G+S +CRYY RG C +G+ CR+ H +P +E+ T V P T S
Sbjct: 233 MALGRSQTICRYYVRGICRFGELCRFSHDLSRGRPECEEQVATDVLPKPSTSSSS----- 397
Query: 130 ETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFVPGQPYCGRAAPSCTXXXXXXXXXXXX 189
A+ +W NA FVP Q A
Sbjct: 398 -----------TIGSRSASISSQQRNWANAPVFVPSQKRY-TAHEQSEFETTVDPEAVME 541
Query: 190 XXXXXXXXXMKKQLCPYAAVG---------------ECRYGENCVY-IHGDVCDMCGLQV 233
+ + VG C +GE Y IH ++C+MC
Sbjct: 542 AQAGASYDTLAPGVSWAEVVGGPSSLNKEDYGEENSSCAWGEFSAYPIHMELCEMCDQYC 721
Query: 234 LHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILS 293
LHP D QR H + C++ HE+ MELSFA+ RSKD CGIC + + EKA E+RFGIL
Sbjct: 722 LHPTDQVQRRSHNRECLQQHEQAMELSFAIARSKDKTCGICFDTIMEKAG-REKRFGILP 898
Query: 294 NCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXX 353
NCNH +CL+CIR WR AKQFE+KI ++CPECR+ S+FV PS +W+
Sbjct: 899 NCNHIFCLECIRTWRQAKQFENKITRACPECRVCSDFVCPSAFWMETKEEKDKLLNDYRA 1078
Query: 354 AMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQRRNR------------F 401
A+ K C+YF +G G CPFG CFYKHA P+G + PK R+ +
Sbjct: 1079ALGAKDCKYFKKGEGKCPFGNKCFYKHALPNGDIVDVGLPKRTRKLQSQNEIIDLLDIYL 1258
Query: 402 WEFIEERE 409
W++++ R+
Sbjct: 1259WDYVDRRD 1282
>gb|AF192788.1|AF192788 Drosophila melanogaster makorin 1 (Mkrn1) mRNA, complete cds
Length = 2196
Score = 228 bits (580), Expect = 1e-57
Identities = 126/368 (34%), Positives = 173/368 (46%), Gaps = 32/368 (8%)
Frame = +1
Query: 74 LSTGQSAMVCRYYQRGCCAYGDHCRYEHT----KPLMQEEELTTVNPAAKTYPSDLALLP 129
++ G+S +CRYY RG C +G+ CR+ H +P +E+ T V P T S
Sbjct: 226 MALGRSQTICRYYVRGICRFGELCRFSHDLSRGRPECEEQVATDVLPKPSTSSSS----- 390
Query: 130 ETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFVPGQPYCGRAAPSCTXXXXXXXXXXXX 189
A+ +W NA FVP Q A
Sbjct: 391 -----------TIGSHSASISSQQRNWANAPVFVPSQKRY-TAHEQREFETTVDPEAVME 534
Query: 190 XXXXXXXXXMKKQLCPYAAVG---------------ECRYGENCVY-IHGDVCDMCGLQV 233
+ + VG C +GE Y IH ++C+MC
Sbjct: 535 AQAGASYDTLAPGVSWAEVVGGPSSLNKEDYGEENSSCAWGEFSAYPIHMELCEMCDQYC 714
Query: 234 LHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILS 293
LHP D QR H + C++ HE+ MELSFA+ RSKD CGIC + + EKA E+RFGIL
Sbjct: 715 LHPTDQVQRRSHNRECLQQHEQAMELSFAIARSKDKTCGICFDTIMEKAG-REKRFGILP 891
Query: 294 NCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXX 353
NCNH +CL+CIR WR AKQFE+KI ++CPECR+ S+FV PS +W+
Sbjct: 892 NCNHIFCLECIRTWRQAKQFENKITRACPECRVCSDFVCPSAFWMETKEEKDKLLNDYRA 1071
Query: 354 AMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQRRNR------------F 401
A+ K C+YF +G G CPFG CFYKHA P+G + PK R+ +
Sbjct: 1072ALGAKDCKYFKKGEGKCPFGNKCFYKHALPNGDIVDVGLPKRTRKLQSQNEIIDLLDIYL 1251
Query: 402 WEFIEERE 409
W++++ R+
Sbjct: 1252WDYVDRRD 1275
>gb|AC008334.7|AC008334 Drosophila melanogaster, chromosome X, region 12F-12F, BAC clone
BACR08K05, complete sequence
Length = 154335
Score = 216 bits (549), Expect = 5e-54
Identities = 113/308 (36%), Positives = 150/308 (48%), Gaps = 1/308 (0%)
Frame = +3
Query: 74 LSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQEEELTTVNPAAKTYPSDLALLPETVX 133
+S +S +CR++ G C +GD CR+ H + + + ++ A + ++ T
Sbjct: 104280 MSYRRSQTICRFHLLGICRFGDLCRFSHDETTPNDNQSPQISEIADEVVENEQVVASTSS 104459
Query: 134 XXXXXXXXXXXXLAAAGVGAEDWVNAVEFVPGQPYCGRAAPSCTXXXXXXXXXXXXXXXX 193
W NA EFVP Y +A
Sbjct: 104460 YSRQMT----------------WANAPEFVPR--YKANSADFQATEGV------------ 104549
Query: 194 XXXXXMKKQLCPYAAVGECRYGENCVY-IHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEA 252
+ +CPY G C +G C Y +H ++C MC L LHP+D QR H + C+E
Sbjct: 104550 -------QDICPYG--GSCIWGSKCSYPLHMEICKMCDLYCLHPMDQNQRRAHNRECLEQ 104702
Query: 253 HEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQ 312
HE+ MELSFA+ RSKD +CGIC + V EK ERRFGILS C H +CL CIR WR A Q
Sbjct: 104703 HEQAMELSFAIARSKDKMCGICFDTVVEKKG-RERRFGILSKCKHIFCLTCIRTWRQAHQ 104879
Query: 313 FESKIIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPF 372
FE+ + + CPECR+ S FV PS YWV AM K C+YF+ G G CPF
Sbjct: 104880 FEATVTRGCPECRVFSEFVCPSAYWVDTKEEKDKLLSEYRAAMGAKDCKYFNGGLGKCPF 105059
Query: 373 GGNCFYKH 380
G CFY+H
Sbjct: 105060 GNKCFYRH 105083
Score = 148 bits (374), Expect = 9e-34
Identities = 78/185 (42%), Positives = 101/185 (54%), Gaps = 6/185 (3%)
Frame = +2
Query: 202 QLCPYAAVGECRYGENCVYIHGDVCDMCGL--QVLHPIDA----AQRSQHIKSCIEAHEK 255
++C Y G CR+ + C Y H DV L Q+ + D A R + A E
Sbjct: 102788 KICRYRLRGNCRFDDLCRYSH-DVLQNDNLRPQISNNADEVVGHANRYSRPMTGANATE- 102961
Query: 256 DMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFES 315
+M+LSFA+ +S+D +CGIC+E V +K E RFGIL C H +CL CIR+WR A+ E
Sbjct: 102962 EMKLSFAIAKSQDKMCGICLETVVKKRG-RECRFGILPKCKHIFCLTCIRRWRQAEYIED 103138
Query: 316 KIIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGN 375
+ + CPECR+ S FV PS YWV AM K C+YF+ G G CPFG N
Sbjct: 103139 NVKRGCPECRVFSEFVCPSAYWVDTKEEKDKLLSEYRAAMGAKDCKYFNGGLGKCPFGTN 103318
Query: 376 CFYKH 380
CFY H
Sbjct: 103319 CFYNH 103333
Score = 36.6 bits (83), Expect = 5.1
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 51 QVTCRYFMHGVCKEGDNCRYSHDLST 76
Q CR+ + G+C+ GD CR+SHD +T
Sbjct: 104298 QTICRFHLLGICRFGDLCRFSHDETT 104375
>gb|AE003496.2|AE003496 Drosophila melanogaster genomic scaffold 142000013386053 section 13 of
30, complete sequence
Length = 299410
Score = 216 bits (549), Expect = 5e-54
Identities = 113/308 (36%), Positives = 150/308 (48%), Gaps = 1/308 (0%)
Frame = +1
Query: 74 LSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQEEELTTVNPAAKTYPSDLALLPETVX 133
+S +S +CR++ G C +GD CR+ H + + + ++ A + ++ T
Sbjct: 288265 MSYRRSQTICRFHLLGICRFGDLCRFSHDETTPNDNQSPQISEIADEVVENEQVVASTSS 288444
Query: 134 XXXXXXXXXXXXLAAAGVGAEDWVNAVEFVPGQPYCGRAAPSCTXXXXXXXXXXXXXXXX 193
W NA EFVP Y +A
Sbjct: 288445 YSRQMT----------------WANAPEFVPR--YKANSADFQATEGV------------ 288534
Query: 194 XXXXXMKKQLCPYAAVGECRYGENCVY-IHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEA 252
+ +CPY G C +G C Y +H ++C MC L LHP+D QR H + C+E
Sbjct: 288535 -------QDICPYG--GSCIWGSKCSYPLHMEICKMCDLYCLHPMDQNQRRAHNRECLEQ 288687
Query: 253 HEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQ 312
HE+ MELSFA+ RSKD +CGIC + V EK ERRFGILS C H +CL CIR WR A Q
Sbjct: 288688 HEQAMELSFAIARSKDKMCGICFDTVVEKKG-RERRFGILSKCKHIFCLTCIRTWRQAHQ 288864
Query: 313 FESKIIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPF 372
FE+ + + CPECR+ S FV PS YWV AM K C+YF+ G G CPF
Sbjct: 288865 FEATVTRGCPECRVFSEFVCPSAYWVDTKEEKDKLLSEYRAAMGAKDCKYFNGGLGKCPF 289044
Query: 373 GGNCFYKH 380
G CFY+H
Sbjct: 289045 GNKCFYRH 289068
Score = 148 bits (374), Expect = 9e-34
Identities = 78/185 (42%), Positives = 101/185 (54%), Gaps = 6/185 (3%)
Frame = +3
Query: 202 QLCPYAAVGECRYGENCVYIHGDVCDMCGL--QVLHPIDA----AQRSQHIKSCIEAHEK 255
++C Y G CR+ + C Y H DV L Q+ + D A R + A E
Sbjct: 286773 KICRYRLRGNCRFDDLCRYSH-DVLQNDNLRPQISNNADEVVGHANRYSRPMTGANATE- 286946
Query: 256 DMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFES 315
+M+LSFA+ +S+D +CGIC+E V +K E RFGIL C H +CL CIR+WR A+ E
Sbjct: 286947 EMKLSFAIAKSQDKMCGICLETVVKKRG-RECRFGILPKCKHIFCLTCIRRWRQAEYIED 287123
Query: 316 KIIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGN 375
+ + CPECR+ S FV PS YWV AM K C+YF+ G G CPFG N
Sbjct: 287124 NVKRGCPECRVFSEFVCPSAYWVDTKEEKDKLLSEYRAAMGAKDCKYFNGGLGKCPFGTN 287303
Query: 376 CFYKH 380
CFY H
Sbjct: 287304 CFYNH 287318
Score = 36.6 bits (83), Expect = 5.1
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 51 QVTCRYFMHGVCKEGDNCRYSHDLST 76
Q CR+ + G+C+ GD CR+SHD +T
Sbjct: 288283 QTICRFHLLGICRFGDLCRFSHDETT 288360
>ref|NM_067619.1| Caenorhabditis elegans
Length = 1242
Score = 212 bits (540), Expect = 5e-53
Identities = 121/375 (32%), Positives = 179/375 (47%), Gaps = 9/375 (2%)
Frame = +1
Query: 51 QVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQEEE 110
+ CRYF +G C +G+ C ++HD++T ++ +C + G C+YG CR+ HT+P + +E
Sbjct: 13 ETDCRYFANGYCSKGNTCTFTHDVAT-RNENICHFNLVGKCSYGRACRFLHTRP--RNDE 183
Query: 111 LTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFVPGQPYCG 170
L P+ T P+T + A EFVP
Sbjct: 184 L----PSCST--------PQTSQNQQNLQNSGQRVRPKQLPELKFNAQAAEFVPRWKMPQ 327
Query: 171 RA-APSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPY-AAVGEC-RYGENCVYIHGDVCD 227
R S + +CPY G+C R +C + HG+ CD
Sbjct: 328 RGPVTSYAGAAASADHGESSSSFQSSHEQAQLMMCPYHQKSGDCNRQDMDCPFAHGNYCD 507
Query: 228 MCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSER 287
MC LHP +A R +H C+ H +ME +F +Q+++ CGICME ++EK
Sbjct: 508 MCQQWSLHPYNAELRKKHENECVANHTTEMERAFLLQKTEQKTCGICMENIFEK----NL 675
Query: 288 RFGILSNCNHTYCLKCIRKWRSAKQ----FESKIIKSCPECRITSNFVIPSEYWVXXXXX 343
RFGIL+ C H +CL CIR+WRS Q +K ++SCPECR S++VIPS +WV
Sbjct: 676 RFGILNGCQHCFCLDCIRQWRSKDQENVELATKTVRSCPECRQHSDYVIPSLFWVESGQE 855
Query: 344 XXXXXXXXXXAMSNKPCRYF--DEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQRRNRF 401
K C+Y+ + RG+CPFG CFYKH PDG + + P ++RR R
Sbjct: 856 KDLLIEMYKENTKRKICKYYSNERSRGACPFGNKCFYKHQLPDGSIDPGEAPSSRRRPRL 1035
Query: 402 WEFIEERENGDPFET 416
+F+ + + ET
Sbjct: 1036VDFLFDDNSDSDEET 1080
>gb|BC012398.1|BC012398 Homo sapiens, clone MGC:8769 IMAGE:3860953, mRNA, complete cds
Length = 1283
Score = 190 bits (483), Expect = 2e-46
Identities = 93/168 (55%), Positives = 105/168 (62%), Gaps = 4/168 (2%)
Frame = +1
Query: 48 WTKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
WTKQVTCRYFMHGVCKEGDNCRYSHDLS ++VC+Y+QRG C YGD CRYEH+KPL Q
Sbjct: 196 WTKQVTCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHSKPLKQ 375
Query: 108 EE----ELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFV 163
EE ELTT + A + S +++ V A G G+EDWVNA+EFV
Sbjct: 376 EEATATELTTKSSLAAS-SSLSSIVGPLVEMNTGEAESRNSNFATVGAGSEDWVNAIEFV 552
Query: 164 PGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGE 211
PGQPYCGR APSCT KKQLCPYAAVGE
Sbjct: 553 PGQPYCGRTAPSCTEAPLQGSVTKEESEKEQTAVETKKQLCPYAAVGE 696
Score = 89.7 bits (221), Expect = 5e-16
Identities = 40/41 (97%), Positives = 41/41 (99%)
Frame = +2
Query: 279 YEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIK 319
+EKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIK
Sbjct: 689 WEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIK 811
>gb|AY070366.1| Arabidopsis thaliana unknown protein (At3g08505) mRNA, complete cds
Length = 1361
Score = 172 bits (437), Expect = 5e-41
Identities = 74/191 (38%), Positives = 115/191 (59%), Gaps = 4/191 (2%)
Frame = +2
Query: 203 LCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFA 262
+C +AA G+C G C ++HGD+C+ CG + LHP +R +H K C E +K +E A
Sbjct: 380 ICSFAAAGDCPRGNQCPHMHGDLCNTCGKKCLHPFRPEEREEHTKEC-EKKQKHIE---A 547
Query: 263 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFE----SKII 318
+++S+D+ C +C++ + KA P ER+FG+L+ C+H +C++CIR WRS+ + +
Sbjct: 548 LKQSQDIECSVCLDRILSKATPGERKFGLLTECDHPFCIQCIRNWRSSAPVSGMDVNSTL 727
Query: 319 KSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFY 378
++CP CR S FV+PS W + + C++F+ G G+CPFG +CFY
Sbjct: 728 RACPICRKLSYFVVPSVVWYSSPEEKKEIIDIYKAKLRSIDCKHFNFGNGNCPFGASCFY 907
Query: 379 KHAYPDGRQEE 389
KHAY DG EE
Sbjct: 908 KHAYSDGHLEE 940
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Frame = +2
Query: 51 QVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTK-----PL 105
++ C++F+HG C +G+NC +SHD S VC +YQ+ C YG CRY+H + PL
Sbjct: 74 RILCKFFVHGSCLKGENCEFSHD-SKDPPNNVCTFYQKRICLYGSRCRYDHVRAASNLPL 250
Query: 106 MQEEELTTVNPAAKTYPS 123
+ E +++ + T PS
Sbjct: 251 SSDSE--SLDRSISTTPS 298
>dbj|AK024987.1|AK024987 Homo sapiens cDNA: FLJ21334 fis, clone COL02541, highly similar to
AF192784 Homo sapiens makorin 1 (MKRN1) mRNA
Length = 1893
Score = 157 bits (398), Expect = 2e-36
Identities = 76/127 (59%), Positives = 80/127 (62%), Gaps = 8/127 (6%)
Frame = +3
Query: 335 EYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPK 394
EYWV AMSNK CRYFDEGRGSCPFGGNCFYKHAYPDGR+EEPQR K
Sbjct: 3 EYWVEEKEEKQKLILKYKEAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQK 182
Query: 395 --------AQRRNRFWEFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSE 446
AQRRN FWE IEEREN +PF+ DE+EVVTF TDSE
Sbjct: 183 VGTSSRYRAQRRNHFWELIEERENSNPFDNDEEEVVTFELGEMLLMLLAASGDDELTDSE 362
Query: 447 DEWDLFH 453
DEWDLFH
Sbjct: 363 DEWDLFH 383
>gb|AC069335.17| Homo sapiens BAC clone RP11-723C11 from 7, complete sequence
Length = 155521
Score = 154 bits (388), Expect = 2e-35
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = -3
Query: 248 SCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKW 307
SCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKW
Sbjct: 48659 SCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKW 48480
Query: 308 RSAKQFESKIIK 319
RSAKQFESKIIK
Sbjct: 48479 RSAKQFESKIIK 48444
Score = 112 bits (279), Expect = 1e-22
Identities = 52/80 (65%), Positives = 54/80 (67%)
Frame = -2
Query: 168 YCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHGDVCD 227
Y AAPSCT KKQLCPYAAVGECRYGENCVY+HGD CD
Sbjct: 51039 YTFSAAPSCTEAPLQGSVTKEESEKEQTAVETKKQLCPYAAVGECRYGENCVYLHGDSCD 50860
Query: 228 MCGLQVLHPIDAAQRSQHIK 247
MCGLQVLHP+DAAQRSQHIK
Sbjct: 50859 MCGLQVLHPMDAAQRSQHIK 50800
Score = 89.4 bits (220), Expect = 7e-16
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -2
Query: 356 SNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQRRNRF 401
SNK CRYFDEGRGSCPFGGNCFYKHAYPDGR+EEPQR K +R+
Sbjct: 47028 SNKACRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQKVGTSSRY 46891
Score = 84.0 bits (206), Expect = 3e-14
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = -3
Query: 55 RYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
RYFMHGVCKEGDNCRYSHDLS ++VC+Y+QRG C YGD CR E +Q
Sbjct: 63806 RYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCR*EFVYKFVQ 63648
Score = 74.3 bits (181), Expect = 2e-11
Identities = 34/60 (56%), Positives = 38/60 (62%)
Frame = -1
Query: 394 KAQRRNRFWEFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLFH 453
+AQRRN FWE IEEREN +PF+ DE+EVVTF TDSEDEWDLFH
Sbjct: 46525 QAQRRNHFWELIEERENSNPFDNDEEEVVTFELGEMLLMLLAAGGDDELTDSEDEWDLFH 46346
Score = 68.2 bits (165), Expect = 2e-09
Identities = 37/79 (46%), Positives = 46/79 (57%), Gaps = 4/79 (5%)
Frame = -3
Query: 98 RYEHTKPLMQEE----ELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGA 153
RYEH+KPL QEE ELTT + A + S +++ V A G G+
Sbjct: 51731 RYEHSKPLKQEEATATELTTKSSLAAS-SSLSSIVGPLVEMNTGEAESRNSNFATVGAGS 51555
Query: 154 EDWVNAVEFVPGQPYCGRA 172
EDWVNA+EFVPGQPYCGR+
Sbjct: 51554 EDWVNAIEFVPGQPYCGRS 51498
Score = 48.9 bits (115), Expect = 0.001
Identities = 23/45 (51%), Positives = 25/45 (55%)
Frame = -1
Query: 319 KSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYF 363
+SCPECRITSNFVIPSEYWV AM + C F
Sbjct: 47695 RSCPECRITSNFVIPSEYWVEEKEEKQKLILKYKEAMRYEHCSLF 47561
>gb|AF192792.1|AF192789S4 Homo sapiens makorin 1 (MKRN1) gene, exon 5 and 6
Length = 2026
Score = 154 bits (388), Expect = 2e-35
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 248 SCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKW 307
SCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKW
Sbjct: 644 SCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKW 823
Query: 308 RSAKQFESKIIK 319
RSAKQFESKIIK
Sbjct: 824 RSAKQFESKIIK 859
Score = 47.8 bits (112), Expect = 0.002
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 319 KSCPECRITSNFVIPSEYWV 338
+SCPECRITSNFVIPSEYWV
Sbjct: 1608 RSCPECRITSNFVIPSEYWV 1667
>gb|AC010701.3| Drosophila melanogaster 3L BAC RP98-26P10 (Roswell Park Cancer Institute
Drosophila BAC Library) complete sequence
Length = 174920
Score = 152 bits (385), Expect = 5e-35
Identities = 91/266 (34%), Positives = 121/266 (45%), Gaps = 20/266 (7%)
Frame = +1
Query: 74 LSTGQSAMVCRYYQRGCCAYGDHCRYEHT----KPLMQEEELTTVNPAAKTYPSDLALLP 129
++ G+S +CRYY RG C +G+ CR+ H +P +E+ T V P T S
Sbjct: 137350 MALGRSQTICRYYVRGICRFGELCRFSHDLSRGRPECEEQVATDVLPKPSTSSSS----- 137514
Query: 130 ETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFVPGQPYCGRAAPSCTXXXXXXXXXXXX 189
A+ +W NA FVP Q A
Sbjct: 137515 -----------TIGSRSASISSQQRNWANAPVFVPSQKRY-TAHEQSEFETTVDPEAVME 137658
Query: 190 XXXXXXXXXMKKQLCPYAAVG---------------ECRYGENCVY-IHGDVCDMCGLQV 233
+ + VG C +GE Y IH ++C+MC
Sbjct: 137659 AQAGASYDTLAPGVSWAEVVGGPSSLNKEDYGEENSSCAWGEFSAYPIHMELCEMCDQYC 137838
Query: 234 LHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILS 293
LHP D QR H + C++ HE+ MELSFA+ RSKD CGIC + + EKA E+RFGIL
Sbjct: 137839 LHPTDQVQRRSHNRECLQQHEQAMELSFAIARSKDKTCGICFDTIMEKAG-REKRFGILP 138015
Query: 294 NCNHTYCLKCIRKWRSAKQFESKIIK 319
NCNH +CL+CIR WR AKQFE+KI +
Sbjct: 138016 NCNHIFCLECIRTWRQAKQFENKITR 138093
Score = 82.0 bits (201), Expect = 1e-13
Identities = 36/86 (41%), Positives = 48/86 (54%)
Frame = +2
Query: 313 FESKIIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPF 372
F S I ++CPECR+ S+FV PS +W+ A+ K C+YF +G G CPF
Sbjct: 138380 F*S*ICRACPECRVCSDFVCPSAFWMETKEEKDKLLNDYRAALGAKDCKYFKKGEGKCPF 138559
Query: 373 GGNCFYKHAYPDGRQEEPQRPKAQRR 398
G CFYKHA P+G + PK R+
Sbjct: 138560 GNKCFYKHALPNGDIVDVGLPKRTRK 138637
>gb|AE003594.1|AE003594 Drosophila melanogaster genomic scaffold 142000013386036 section 4 of 9,
complete sequence
Length = 305516
Score = 152 bits (385), Expect = 5e-35
Identities = 91/266 (34%), Positives = 121/266 (45%), Gaps = 20/266 (7%)
Frame = -3
Query: 74 LSTGQSAMVCRYYQRGCCAYGDHCRYEHT----KPLMQEEELTTVNPAAKTYPSDLALLP 129
++ G+S +CRYY RG C +G+ CR+ H +P +E+ T V P T S
Sbjct: 258021 MALGRSQTICRYYVRGICRFGELCRFSHDLSRGRPECEEQVATDVLPKPSTSSSS----- 257857
Query: 130 ETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFVPGQPYCGRAAPSCTXXXXXXXXXXXX 189
A+ +W NA FVP Q A
Sbjct: 257856 -----------TIGSRSASISSQQRNWANAPVFVPSQKRY-TAHEQSEFETTVDPEAVME 257713
Query: 190 XXXXXXXXXMKKQLCPYAAVG---------------ECRYGENCVY-IHGDVCDMCGLQV 233
+ + VG C +GE Y IH ++C+MC
Sbjct: 257712 AQAGASYDTLAPGVSWAEVVGGPSSLNKEDYGEENSSCAWGEFSAYPIHMELCEMCDQYC 257533
Query: 234 LHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILS 293
LHP D QR H + C++ HE+ MELSFA+ RSKD CGIC + + EKA E+RFGIL
Sbjct: 257532 LHPTDQVQRRSHNRECLQQHEQAMELSFAIARSKDKTCGICFDTIMEKAG-REKRFGILP 257356
Query: 294 NCNHTYCLKCIRKWRSAKQFESKIIK 319
NCNH +CL+CIR WR AKQFE+KI +
Sbjct: 257355 NCNHIFCLECIRTWRQAKQFENKITR 257278
Score = 82.0 bits (201), Expect = 1e-13
Identities = 36/86 (41%), Positives = 48/86 (54%)
Frame = -1
Query: 313 FESKIIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPF 372
F S I ++CPECR+ S+FV PS +W+ A+ K C+YF +G G CPF
Sbjct: 256991 F*S*ICRACPECRVCSDFVCPSAFWMETKEEKDKLLNDYRAALGAKDCKYFKKGEGKCPF 256812
Query: 373 GGNCFYKHAYPDGRQEEPQRPKAQRR 398
G CFYKHA P+G + PK R+
Sbjct: 256811 GNKCFYKHALPNGDIVDVGLPKRTRK 256734
>gb|AF192794.1|AF192794 Drosophila melanogaster makorin 1 (Mkrn1) gene, complete cds
Length = 4791
Score = 152 bits (383), Expect = 8e-35
Identities = 91/266 (34%), Positives = 121/266 (45%), Gaps = 20/266 (7%)
Frame = +3
Query: 74 LSTGQSAMVCRYYQRGCCAYGDHCRYEHT----KPLMQEEELTTVNPAAKTYPSDLALLP 129
++ G+S +CRYY RG C +G+ CR+ H +P +E+ T V P T S
Sbjct: 2331 MALGRSQTICRYYVRGICRFGELCRFSHDLSRGRPECEEQVATDVLPKPSTSSSS----- 2495
Query: 130 ETVXXXXXXXXXXXXXLAAAGVGAEDWVNAVEFVPGQPYCGRAAPSCTXXXXXXXXXXXX 189
A+ +W NA FVP Q A
Sbjct: 2496 -----------TIGSHSASISSQQRNWANAPVFVPSQKRY-TAHEQREFETTVDPEAVME 2639
Query: 190 XXXXXXXXXMKKQLCPYAAVG---------------ECRYGENCVY-IHGDVCDMCGLQV 233
+ + VG C +GE Y IH ++C+MC
Sbjct: 2640 AQAGASYDTLAPGVSWAEVVGGPSSLNKEDYGEENSSCAWGEFSAYPIHMELCEMCDQYC 2819
Query: 234 LHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILS 293
LHP D QR H + C++ HE+ MELSFA+ RSKD CGIC + + EKA E+RFGIL
Sbjct: 2820 LHPTDQVQRRSHNRECLQQHEQAMELSFAIARSKDKTCGICFDTIMEKAG-REKRFGILP 2996
Query: 294 NCNHTYCLKCIRKWRSAKQFESKIIK 319
NCNH +CL+CIR WR AKQFE+KI +
Sbjct: 2997 NCNHIFCLECIRTWRQAKQFENKITR 3074
Score = 82.4 bits (202), Expect = 8e-14
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +3
Query: 303 CIRKW-RSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCR 361
C+R W + S I ++CPECR+ S+FV PS +W+ A+ K C+
Sbjct: 3327 CLRLWWYNFDLI*S*ICRACPECRVCSDFVCPSAFWMETKEEKDKLLNDYRAALGAKDCK 3506
Query: 362 YFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQRR 398
YF +G G CPFG CFYKHA P+G + PK R+
Sbjct: 3507 YFKKGEGKCPFGNKCFYKHALPNGDIVDVGLPKRTRK 3617
>gb|AF198100.1|AF198100 Fowlpox virus, complete genome
Length = 288539
Score = 137 bits (344), Expect = 3e-30
Identities = 62/136 (45%), Positives = 83/136 (60%)
Frame = +3
Query: 203 LCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFA 262
LCP+ +G C YG+ C YIHGD CD+CGL +LHP D QR H K+C+ D +
Sbjct: 187803 LCPFIELGRCYYGKKCKYIHGDQCDICGLYILHPTDINQRVSHKKTCL----VDRDSLIV 187970
Query: 263 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 322
+RS CGIC+E + K + SE+ FGIL +C H +CL CIR+W + + +CP
Sbjct: 187971 FKRSTSKKCGICIEEI-NKKHISEQYFGILPSCKHIFCLSCIRRWADTTR-NTDTENTCP 188144
Query: 323 ECRITSNFVIPSEYWV 338
ECRI F+IPS YW+
Sbjct: 188145 ECRIVFPFIIPSRYWI 188192
Score = 110 bits (275), Expect = 3e-22
Identities = 53/137 (38%), Positives = 80/137 (57%), Gaps = 1/137 (0%)
Frame = +1
Query: 202 QLCPYAAVGEC-RYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELS 260
+LCP A +G+C + +C Y+HGD+CD+CG + LHP D +R H K C++ K+
Sbjct: 182416 ELCPDAIIGKCCKTKSSCEYVHGDICDICGFEALHPTDIDKRLTHEKVCMQLLCKE---- 182583
Query: 261 FAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKS 320
++ K CGIC++ + P +GILS+CNH +C+ CI+ W + SK K
Sbjct: 182584 -DIKYDK---CGICLDAIKGNKKP----YGILSDCNHMFCINCIKTWMTT--INSK--KQ 182727
Query: 321 CPECRITSNFVIPSEYW 337
CPECR+ S ++I S W
Sbjct: 182728 CPECRVPSKYIIQSPIW 182778
>gb|AC074395.1|AC074395 Arabidopsis thaliana chromosome 3 BAC T8G24 genomic sequence, complete
sequence
Length = 29605
Score = 131 bits (330), Expect = 1e-28
Identities = 55/139 (39%), Positives = 89/139 (63%), Gaps = 4/139 (2%)
Frame = -3
Query: 203 LCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFA 262
+C +AA G+C G C ++HGD+C+ CG + LHP +R +H K C E +K +E A
Sbjct: 17015 ICSFAAAGDCPRGNQCPHMHGDLCNTCGKKCLHPFRPEEREEHTKEC-EKKQKHIE---A 16848
Query: 263 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFE----SKII 318
+++S+D+ C +C++ + KA P ER+FG+L+ C+H +C++CIR WRS+ + +
Sbjct: 16847 LKQSQDIECSVCLDRILSKATPGERKFGLLTECDHPFCIQCIRNWRSSAPVSGMDVNSTL 16668
Query: 319 KSCPECRITSNFVIPSEYW 337
++CP CR S FV+PS W
Sbjct: 16667 RACPICRKLSYFVVPSVVW 16611
Score = 38.5 bits (88), Expect(2) = 9e-06
Identities = 11/23 (47%), Positives = 19/23 (81%)
Frame = -1
Query: 51 QVTCRYFMHGVCKEGDNCRYSHD 73
++ C++F+HG C +G+NC +SHD
Sbjct: 17398 RILCKFFVHGSCLKGENCEFSHD 17330
Score = 37.7 bits (86), Expect = 2.3
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = -1
Query: 360 CRYFDEGRGSCPFGGNCFYK 379
C++F+ G G+CPFG +CFYK
Sbjct: 16447 CKHFNFGNGNCPFGASCFYK 16388
Score = 36.6 bits (83), Expect(2) = 9e-06
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Frame = -3
Query: 82 VCRYYQRGCCAYGDHCRYEHTK-----PLMQEEELTTVNPAAKTYPS 123
VC +YQ+ C YG CRY+H + PL + E +++ + T PS
Sbjct: 17231 VCTFYQKRICLYGSRCRYDHVRAASNLPLSSDSE--SLDRSISTTPS 17097
>gb|AE003519.2|AE003519 Drosophila melanogaster genomic scaffold 142000013386050 section 49 of
54, complete sequence
Length = 277023
Score = 130 bits (328), Expect = 2e-28
Identities = 63/159 (39%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Frame = -1
Query: 229 CGLQVLHPIDAAQRSQHIK--SCIEAH-EKDMELSFAVQRSKDMVCGICMEVVYEKANPS 285
C + P A + +K S + +H + SFA RS+D CGIC E + EK
Sbjct: 79587 CTTVAVRPSGVATSADIVKGSSSVSSHVQPSWRSSFA--RSQDKKCGICFETIMEKEG-G 79417
Query: 286 ERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXXXX 345
++RFGIL +CNH +C +CI WR A Q+ ++ ++CPECR+ SNFV PS +WV
Sbjct: 79416 DKRFGILPSCNHVFCFQCICTWRHATQYAYQVTRACPECRVWSNFVCPSAFWVEEKVAKD 79237
Query: 346 XXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPD 384
AM + C+YF +G+G C FG CFYKH+ P+
Sbjct: 79236 QLINDHLAAMRARDCKYFKQGQGVCLFGNKCFYKHSIPN 79120
>gb|AC009380.5| Drosophila melanogaster 3L BAC RP98-17L5 (Roswell Park Cancer Institute
Drosophila BAC Library) complete sequence
Length = 187967
Score = 130 bits (328), Expect = 2e-28
Identities = 63/159 (39%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Frame = -3
Query: 229 CGLQVLHPIDAAQRSQHIK--SCIEAH-EKDMELSFAVQRSKDMVCGICMEVVYEKANPS 285
C + P A + +K S + +H + SFA RS+D CGIC E + EK
Sbjct: 137268 CTTVAVRPSGVATSADIVKGSSSVSSHVQPSWRSSFA--RSQDKKCGICFETIMEKEG-G 137098
Query: 286 ERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXXXX 345
++RFGIL +CNH +C +CI WR A Q+ ++ ++CPECR+ SNFV PS +WV
Sbjct: 137097 DKRFGILPSCNHVFCFQCICTWRHATQYAYQVTRACPECRVWSNFVCPSAFWVEEKVAKD 136918
Query: 346 XXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPD 384
AM + C+YF +G+G C FG CFYKH+ P+
Sbjct: 136917 QLINDHLAAMRARDCKYFKQGQGVCLFGNKCFYKHSIPN 136801
>gb|AC009372.5| Drosophila melanogaster 3L BAC RP98-48N4 (Roswell Park Cancer Institute
Drosophila BAC Library) complete sequence
Length = 175089
Score = 130 bits (328), Expect = 2e-28
Identities = 63/159 (39%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Frame = +2
Query: 229 CGLQVLHPIDAAQRSQHIK--SCIEAH-EKDMELSFAVQRSKDMVCGICMEVVYEKANPS 285
C + P A + +K S + +H + SFA RS+D CGIC E + EK
Sbjct: 164909 CTTVAVRPSGVATSADIVKGSSSVSSHVQPSWRSSFA--RSQDKKCGICFETIMEKEG-G 165079
Query: 286 ERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVXXXXXXX 345
++RFGIL +CNH +C +CI WR A Q+ ++ ++CPECR+ SNFV PS +WV
Sbjct: 165080 DKRFGILPSCNHVFCFQCICTWRHATQYAYQVTRACPECRVWSNFVCPSAFWVEEKVAKD 165259
Query: 346 XXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPD 384
AM + C+YF +G+G C FG CFYKH+ P+
Sbjct: 165260 QLINDHLAAMRARDCKYFKQGQGVCLFGNKCFYKHSIPN 165376
>dbj|AK004225.1|AK004225 Mus musculus 18 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:1110050P23:makorin, ring finger
protein, 1, full insert sequence
Length = 523
Score = 109 bits (272), Expect(2) = 1e-24
Identities = 50/75 (66%), Positives = 53/75 (70%)
Frame = +1
Query: 327 TSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGR 386
TSNFVIPSE WV AMSNK CRYFDEGRGSCPFGGNCFYKHAYPDGR
Sbjct: 1 TSNFVIPSENWVEEKEEKQKLIQKYKEAMSNKACRYFDEGRGSCPFGGNCFYKHAYPDGR 180
Query: 387 QEEPQRPKAQRRNRF 401
+EEPQR K +R+
Sbjct: 181 REEPQRQKVGTSSRY 225
Score = 30.0 bits (66), Expect(2) = 1e-24
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 443 TDSEDEWDLFH 453
TDSEDEWDLFH
Sbjct: 246 TDSEDEWDLFH 278
>ref|XM_069496.1| Homo sapiens similar to dJ109F14.3 (PUTATIVE ZNF127 LIKE protein)
(LOC135703), mRNA
Length = 819
Score = 117 bits (294), Expect = 2e-24
Identities = 54/127 (42%), Positives = 74/127 (57%), Gaps = 1/127 (0%)
Frame = +1
Query: 258 ELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQ-FESK 316
E S A Q S+D+VCGICM+ V++K ++R FGIL NC H +CL C+R WR +Q F
Sbjct: 238 ESSGAPQDSRDVVCGICMDKVWDKPE-AQRVFGILPNCTHAHCLGCLRTWRKNRQDFPLD 414
Query: 317 IIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNC 376
+IK+CP+CR+ S+++IP ++WV S CR+F G G CPF C
Sbjct: 415 VIKACPQCRVHSSYIIPHKFWVSKGAQKEQLIRNFKARTSQIRCRFFVRGNGRCPFKSEC 594
Query: 377 FYKHAYP 383
Y H P
Sbjct: 595 IYLHQLP 615
>gb|AF375654.1|AF375654 Ateles belzebuth chamek makorin 3 (MKRN3) gene, partial cds
Length = 304
Score = 112 bits (280), Expect = 7e-23
Identities = 54/104 (51%), Positives = 64/104 (60%)
Frame = +1
Query: 162 FVPGQPYCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYI 221
FVPG PY GR S ++ C YA+ G C GE+C+Y+
Sbjct: 1 FVPGHPYRGRWVASAPEAPLQSSETERKQMAVGRG----ERFCYYASRGVCFRGESCMYL 168
Query: 222 HGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQR 265
HGD+CDMCGLQ LHP+DAAQR HI++CIEAHEKDMELSF VQR
Sbjct: 169 HGDICDMCGLQTLHPMDAAQREDHIRACIEAHEKDMELSFXVQR 300
>gb|AF192791.1|AF192789S3 Homo sapiens makorin 1 (MKRN1) gene, exon 3 and 4
Length = 1701
Score = 110 bits (276), Expect = 2e-22
Identities = 51/80 (63%), Positives = 54/80 (66%)
Frame = +2
Query: 168 YCGRAAPSCTXXXXXXXXXXXXXXXXXXXXXMKKQLCPYAAVGECRYGENCVYIHGDVCD 227
Y AAPSCT KKQLCPYAAVGECRYGENCVY+HGD CD
Sbjct: 908 YTFSAAPSCTEAPLQGSVTKEESEKEQTAVETKKQLCPYAAVGECRYGENCVYLHGDSCD 1087
Query: 228 MCGLQVLHPIDAAQRSQHIK 247
MCGLQ+LHP+DAAQRSQHIK
Sbjct: 1088MCGLQLLHPMDAAQRSQHIK 1147
Score = 68.2 bits (165), Expect = 2e-09
Identities = 37/79 (46%), Positives = 46/79 (57%), Gaps = 4/79 (5%)
Frame = +3
Query: 98 RYEHTKPLMQEE----ELTTVNPAAKTYPSDLALLPETVXXXXXXXXXXXXXLAAAGVGA 153
RYEH+KPL QEE ELTT + A + S +++ V A G G+
Sbjct: 216 RYEHSKPLKQEEATATELTTKSSLAAS-SSLSSIVGPLVEMNTGEAESRNSNFATVGAGS 392
Query: 154 EDWVNAVEFVPGQPYCGRA 172
EDWVNA+EFVPGQPYCGR+
Sbjct: 393 EDWVNAIEFVPGQPYCGRS 449
>gb|AF277168.1|AF277164S5 Homo sapiens Makorin RING zinc-finger protein 2 (MKRN2) gene, exon
5
Length = 815
Score = 108 bits (270), Expect = 1e-21
Identities = 49/74 (66%), Positives = 59/74 (79%)
Frame = +2
Query: 246 IKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIR 305
++ C+ E +ME +FA Q S+D VC ICMEV+ EKA+ SERRFGILSNCNHTYCL CIR
Sbjct: 125 LQICMLTFEHEMEKAFAFQASQDKVCSICMEVILEKASASERRFGILSNCNHTYCLSCIR 304
Query: 306 KWRSAKQFESKIIK 319
+WR AKQFE+ IIK
Sbjct: 305 QWRCAKQFENPIIK 346
>gb|AC018500.3|AC018500 Homo sapiens chromosome 3 clone RP11-275J11 map 3p, complete sequence
Length = 150804
Score = 108 bits (270), Expect = 1e-21
Identities = 49/74 (66%), Positives = 59/74 (79%)
Frame = +2
Query: 246 IKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIR 305
++ C+ E +ME +FA Q S+D VC ICMEV+ EKA+ SERRFGILSNCNHTYCL CIR
Sbjct: 116549 LQICMLTFEHEMEKAFAFQASQDKVCSICMEVILEKASASERRFGILSNCNHTYCLSCIR 116728
Query: 306 KWRSAKQFESKIIK 319
+WR AKQFE+ IIK
Sbjct: 116729 QWRCAKQFENPIIK 116770
Score = 78.6 bits (192), Expect = 1e-12
Identities = 31/48 (64%), Positives = 39/48 (80%)
Frame = +2
Query: 200 KKQLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIK 247
++QLCPYAA GECR+G+ CVY+HG+VC++C LQVLHP D QR H K
Sbjct: 113993 EQQLCPYAAAGECRFGDACVYLHGEVCEICRLQVLHPFDPEQRKAHEK 114136
Score = 75.1 bits (183), Expect = 1e-11
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = +2
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCR 98
CRYFMHGVC+EG C +SHDL+ + + +C+YYQ+G CAYG CR
Sbjct: 110633 CRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGTRCR 110767
Score = 67.0 bits (162), Expect = 4e-09
Identities = 23/39 (58%), Positives = 32/39 (81%)
Frame = +2
Query: 358 KPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQ 396
K C+YF++G+G+CPFG C Y+HAYPDGR EP++P+ Q
Sbjct: 123575 KACKYFEQGKGTCPFGSKCLYRHAYPDGRLAEPEKPRKQ 123691
Score = 40.0 bits (92), Expect = 0.46
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3
Query: 319 KSCPECRITSNFVIPSEYWV 338
+SCPECR+ S FVIPS YWV
Sbjct: 118392 RSCPECRVISEFVIPSVYWV 118451
>gb|AC026170.4|AC026170 Homo sapiens chromosome 3 clone RP11-163D23 map 3p, complete
sequence
Length = 145206
Score = 108 bits (270), Expect = 1e-21
Identities = 49/74 (66%), Positives = 59/74 (79%)
Frame = +2
Query: 246 IKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIR 305
++ C+ E +ME +FA Q S+D VC ICMEV+ EKA+ SERRFGILSNCNHTYCL CIR
Sbjct: 473 LQICMLTFEHEMEKAFAFQASQDKVCSICMEVILEKASASERRFGILSNCNHTYCLSCIR 652
Query: 306 KWRSAKQFESKIIK 319
+WR AKQFE+ IIK
Sbjct: 653 QWRCAKQFENPIIK 694
Score = 67.0 bits (162), Expect = 4e-09
Identities = 23/39 (58%), Positives = 32/39 (81%)
Frame = +3
Query: 358 KPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQ 396
K C+YF++G+G+CPFG C Y+HAYPDGR EP++P+ Q
Sbjct: 7512 KACKYFEQGKGTCPFGSKCLYRHAYPDGRLAEPEKPRKQ 7628
Score = 40.0 bits (92), Expect = 0.46
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3
Query: 319 KSCPECRITSNFVIPSEYWV 338
+SCPECR+ S FVIPS YWV
Sbjct: 2316 RSCPECRVISEFVIPSVYWV 2375
>gb|AC009969.10| Homo sapiens BAC clone RP11-418G17 from 2, complete sequence
Length = 166892
Score = 87.4 bits (215), Expect(2) = 6e-21
Identities = 42/63 (66%), Positives = 45/63 (70%), Gaps = 8/63 (12%)
Frame = +3
Query: 354 AMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPK--------AQRRNRFWEFI 405
AMSNK C+YFDEG GSCPFG NCFYKH YPDGR+E+PQR K AQR N F E
Sbjct: 84291 AMSNKVCKYFDEGCGSCPFGENCFYKHVYPDGRREKPQRQKVGTSSRYWAQRSNHF*ELN 84470
Query: 406 EER 408
EER
Sbjct: 84471 EER 84479
Score = 39.3 bits (90), Expect(2) = 6e-21
Identities = 20/46 (43%), Positives = 23/46 (49%)
Frame = +2
Query: 408 RENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLFH 453
REN +P + DE+EVVTF DSEDE DLFH
Sbjct: 84473 RENSNPTDNDEEEVVTFELGKMLLMLLAAGGDDELIDSEDE*DLFH 84610
>dbj|AB078012.1|AB078012 Seriola quinqueradiata mRNA for Makorin ring finger protein 2,
partial cds, clone:pYGHL2Ea
Length = 1182
Score = 80.9 bits (198), Expect(2) = 4e-20
Identities = 35/65 (53%), Positives = 43/65 (65%), Gaps = 10/65 (15%)
Frame = +2
Query: 355 MSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQRRN----------RFWEF 404
+S K C+YFD+GRGSCPFGG C Y HA+PDG + EP RP+ Q + R W+F
Sbjct: 116 VSKKACKYFDQGRGSCPFGGKCLYLHAFPDGTRAEPDRPRKQLSSEGNVRFMNSVRLWDF 295
Query: 405 IEERE 409
IEERE
Sbjct: 296 IEERE 310
Score = 43.1 bits (100), Expect(2) = 4e-20
Identities = 17/21 (80%), Positives = 18/21 (84%)
Frame = +1
Query: 317 IIKSCPECRITSNFVIPSEYW 337
IIKSCPECR+ S FVIPS YW
Sbjct: 1 IIKSCPECRVVSEFVIPSVYW 63
>ref|XM_092695.1| Homo sapiens similar to kruppel-related zinc finger protein
(LOC164239), mRNA
Length = 2943
Score = 102 bits (254), Expect = 8e-20
Identities = 53/104 (50%), Positives = 64/104 (60%), Gaps = 4/104 (3%)
Frame = -1
Query: 354 AMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPK----AQRRNRFWEFIEERE 409
AMS++ CR FDEG+GSCP G CFYK +PDG +++ QR AQ RN F E IEERE
Sbjct: 309 AMSSQACRDFDEGQGSCPSWGMCFYKQVFPDGHRKDTQRQANRYWAQ*RNHFSELIEERE 130
Query: 410 NGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLFH 453
N DPF+ +E+EVVTF TD E+EWDLFH
Sbjct: 129 NNDPFDNNEEEVVTF-ELGEMLLMLLADGDDELTDFENEWDLFH 1
Score = 74.7 bits (182), Expect = 2e-11
Identities = 30/52 (57%), Positives = 36/52 (68%)
Frame = -1
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPL 105
C YF+HG+CKEG NCRY H LS +V +Y+QR C YG CR EH+KPL
Sbjct: 645 CWYFVHGICKEGHNCRYLHSLSDSPHGVVGKYFQRRYCVYGGRCRCEHSKPL 490
>gb|AC024826.1| Caenorhabditis elegans cosmid Y55F3AM, complete sequence
Length = 107705
Score = 101 bits (252), Expect = 1e-19
Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Frame = +3
Query: 246 IKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIR 305
++ C+ H +ME +F +Q+++ CGICME ++EK RFGIL+ C H +CL CIR
Sbjct: 14883 LQECVANHTTEMERAFLLQKTEQKTCGICMENIFEK----NLRFGILNGCQHCFCLDCIR 15050
Query: 306 KWRSAKQ----FESKIIKSCPECRITSNFVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCR 361
+WRS Q +K ++SCPECR S++VIPS +WV K C+
Sbjct: 15051 QWRSKDQENVELATKTVRSCPECRQHSDYVIPSLFWVESGQEKDLLIEMYKENTKRKICK 15230
Query: 362 YF 363
Y+
Sbjct: 15231 YY 15236
Score = 42.7 bits (99), Expect = 0.072
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Frame = +1
Query: 203 LCPY-AAVGEC-RYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELS 260
+CPY G+C R +C + HG+ CDMC LHP +A R +H ++ E +L
Sbjct: 13561 MCPYHQKSGDCNRQDMDCPFAHGNYCDMCQQWSLHPYNAELRKKHENVRLKKLENPEKLH 13740
Query: 261 FAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKI 317
F C ME Y + + R G +C K ++K + FE K+
Sbjct: 13741 F---------CT*KME-KYREIDEKPRFSG-------NFCAKMVKKKLKSCIFEPKL 13860
Score = 40.8 bits (94), Expect = 0.27
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 364 DEGRGSCPFGGNCFYKHAYPDG 385
+ RG+CPFG CFYKH PDG
Sbjct: 16578 ERSRGACPFGNKCFYKHQLPDG 16643
>dbj|AB047517.1|AB047517 Seriola quinqueradiata gene for zinc finger protein YGHLC3HC4,
complete cds
Length = 4488
Score = 89.7 bits (221), Expect = 5e-16
Identities = 46/100 (46%), Positives = 57/100 (57%), Gaps = 26/100 (26%)
Frame = +2
Query: 246 IKSCIEAHEKDMELSFAVQRSKD--------------------------MVCGICMEVVY 279
++ C+ A E DME +FA Q S+D VC ICMEVV
Sbjct: 2738 LQMCLAAFEADMEKAFAAQLSQDKVG*LSH*SGCYGDSMVTRTVFVVVVQVCSICMEVVV 2917
Query: 280 EKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIK 319
+KANPS+RRFGILS+C HT+CL CIRKWR + F + IIK
Sbjct: 2918 QKANPSDRRFGILSSCCHTFCLACIRKWRCTRTFSNTIIK 3037
Score = 78.2 bits (191), Expect = 2e-12
Identities = 32/48 (66%), Positives = 37/48 (76%)
Frame = +3
Query: 202 QLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIKSC 249
QLCPYAA G C Y ENC Y+HGD+C++CGLQVLHP D+ QR H K C
Sbjct: 1782 QLCPYAANGHCFYEENCTYLHGDLCEVCGLQVLHPHDSEQRRAHEKVC 1925
Score = 72.0 bits (175), Expect = 1e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
T + RYF+HGVC+EG C +SHDL+ + + +C++YQRG CAYG+ C H
Sbjct: 895 THMLCFRYFLHGVCREGSRCLFSHDLNNSKPSTICKFYQRGVCAYGERCSNAH 1053
Score = 70.9 bits (172), Expect = 2e-10
Identities = 27/41 (65%), Positives = 32/41 (77%)
Frame = +1
Query: 356 SNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQ 396
S K C+YFD+GRGSCPFGG C Y HA+PDG + EP RP+ Q
Sbjct: 3757 SKKACKYFDQGRGSCPFGGKCLYLHAFPDGTRAEPDRPRKQ 3879
Score = 42.4 bits (98), Expect = 0.093
Identities = 17/24 (70%), Positives = 19/24 (78%)
Frame = +3
Query: 315 SKIIKSCPECRITSNFVIPSEYWV 338
S I+SCPECR+ S FVIPS YWV
Sbjct: 3186 SLCIRSCPECRVVSEFVIPSVYWV 3257
>gb|AF192793.1|AF192789S5 Homo sapiens makorin 1 (MKRN1) gene, exon 7, 8, and complete cds
Length = 2752
Score = 89.4 bits (220), Expect = 7e-16
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = +1
Query: 356 SNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQRRNRF 401
SNK CRYFDEGRGSCPFGGNCFYKHAYPDGR+EEPQR K +R+
Sbjct: 238 SNKACRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQKVGTSSRY 375
Score = 74.3 bits (181), Expect = 2e-11
Identities = 34/60 (56%), Positives = 38/60 (62%)
Frame = +3
Query: 394 KAQRRNRFWEFIEERENGDPFETDEDEVVTFXXXXXXXXXXXXXXXXXXTDSEDEWDLFH 453
+AQRRN FWE IEEREN +PF+ DE+EVVTF TDSEDEWDLFH
Sbjct: 741 QAQRRNHFWELIEERENSNPFDNDEEEVVTFELGEMLLMLLAAGGDDELTDSEDEWDLFH 920
>gb|AC055733.16| Homo sapiens 3 BAC RP11-39E3 (Roswell Park Cancer Institute Human BAC
Library) complete sequence
Length = 193425
Score = 55.8 bits (133), Expect(3) = 2e-14
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2
Query: 301 LKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWV 338
LKC+ KWRS KQ +SK++KS PEC+ NFVIP EY V
Sbjct: 115748 LKCVHKWRSTKQQKSKMVKSIPECQAIFNFVIPHEYCV 115861
Score = 47.8 bits (112), Expect(3) = 2e-14
Identities = 24/39 (61%), Positives = 27/39 (68%)
Frame = +1
Query: 356 SNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPK 394
S+K CRYF+E GSCPFG NC K AYPDG + QR K
Sbjct: 115909 SDKACRYFNEEHGSCPFGENC-SKSAYPDGGKRS-QRQK 116019
Score = 20.8 bits (42), Expect(3) = 2e-14
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3
Query: 289 FGILSNCNHT 298
F +LS+CNHT
Sbjct: 115713 FEMLSSCNHT 115742
>gb|AF192790.1|AF192789S2 Homo sapiens makorin 1 (MKRN1) gene, exon 2
Length = 952
Score = 84.0 bits (206), Expect = 3e-14
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = +1
Query: 55 RYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
RYFMHGVCKEGDNCRYSHDLS ++VC+Y+QRG C YGD CR E +Q
Sbjct: 520 RYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCR*EFVYKFVQ 678
>dbj|AB033379.1|AB033379 Seriola quinqueradiata YGHLC3HC4 gene for zinc finger protein,
partial cds
Length = 1257
Score = 84.0 bits (206), Expect = 3e-14
Identities = 36/53 (67%), Positives = 43/53 (80%)
Frame = +1
Query: 267 KDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIK 319
+D VC ICMEVV +KANPS+RRFGILS+C HT+CL CIRKWR + F + IIK
Sbjct: 1 QDKVCSICMEVVVQKANPSDRRFGILSSCCHTFCLACIRKWRCTRTFSNTIIK 159
Score = 70.9 bits (172), Expect = 2e-10
Identities = 27/41 (65%), Positives = 32/41 (77%)
Frame = +3
Query: 356 SNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQ 396
S K C+YFD+GRGSCPFGG C Y HA+PDG + EP RP+ Q
Sbjct: 879 SKKACKYFDQGRGSCPFGGKCLYLHAFPDGTRAEPDRPRKQ 1001
Score = 42.4 bits (98), Expect = 0.093
Identities = 17/24 (70%), Positives = 19/24 (78%)
Frame = +2
Query: 315 SKIIKSCPECRITSNFVIPSEYWV 338
S I+SCPECR+ S FVIPS YWV
Sbjct: 308 SLCIRSCPECRVVSEFVIPSVYWV 379
>emb|AL022721.1|HS109F14 Human DNA sequence from clone 109F14 on chromosome 6p21.2-21.3.
Contains the alternatively spliced gene for
Transcriptional Enhancer Factor TEF-5, the 60S Ribosomal
Protein RPL10A gene, a PUTATIVE ZNF127 LIKE gene, and the
PPARD for Peroxisome Prolifer>
Length = 170245
Score = 64.3 bits (155), Expect(2) = 5e-13
Identities = 30/58 (51%), Positives = 41/58 (69%), Gaps = 1/58 (1%)
Frame = -3
Query: 264 QRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQ-FESKIIKS 320
Q S+D+VCGICM+ V++K ++R FGIL NC H +CL C+R WR +Q F +IKS
Sbjct: 49856 QDSRDVVCGICMDKVWDKPE-AQRVFGILPNCTHAHCLGCLRTWRKNRQDFPLDVIKS 49686
Score = 35.4 bits (80), Expect(2) = 5e-13
Identities = 9/22 (40%), Positives = 20/22 (90%)
Frame = -2
Query: 317 IIKSCPECRITSNFVIPSEYWV 338
++++CP+CR+ S+++IP ++WV
Sbjct: 49593 LLRACPQCRVHSSYIIPHKFWV 49528
>gb|AF277167.1|AF277164S4 Homo sapiens Makorin RING zinc-finger protein 2 (MKRN2) gene, exon
4
Length = 957
Score = 76.6 bits (187), Expect = 4e-12
Identities = 30/48 (62%), Positives = 38/48 (78%)
Frame = +1
Query: 200 KKQLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPIDAAQRSQHIK 247
++QLCPYAA GECR+G+ C Y+HG+VC++C LQVLHP D QR H K
Sbjct: 502 EQQLCPYAAAGECRFGDACFYLHGEVCEICRLQVLHPFDPEQRKAHEK 645
>ref|XM_093717.1| Homo sapiens similar to interleukin-1 receptor-associated kinase 2
(H. sapiens) (LOC166189), mRNA
Length = 2550
Score = 75.1 bits (183), Expect = 1e-11
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 10/63 (15%)
Frame = +1
Query: 358 KPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQRRN----------RFWEFIEE 407
K C+YF++G+G+CPFG C Y+HAYPDGR EP++P+ Q + R W+FIE
Sbjct: 2272 KACKYFEQGKGTCPFGSKCLYRHAYPDGRLAEPEKPRKQLSSQGTVRFFNSVRLWDFIEN 2451
Query: 408 REN 410
RE+
Sbjct: 2452 RES 2460
>gb|AF277165.1|AF277164S2 Homo sapiens Makorin RING zinc-finger protein 2 (MKRN2) gene, exon
2
Length = 1045
Score = 75.1 bits (183), Expect = 1e-11
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = +3
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCR 98
CRYFMHGVC+EG C +SHDL+ + + +C+YYQ+G CAYG CR
Sbjct: 465 CRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGTRCR 599
>gb|AF410153.1| Swinepox virus isolate 17077-99, complete genome
Length = 146454
Score = 67.8 bits (164), Expect = 2e-09
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +3
Query: 266 SKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECR 325
S D C ICME+VYEK S + FGILS+CNH +C+ CI +WR + +CP CR
Sbjct: 133194 SIDKECSICMEIVYEKKMKS-KFFGILSHCNHIFCIDCINEWRKQR-------NTCPLCR 133349
Query: 326 ITSNFVIPSEYW 337
+T + +I + ++
Sbjct: 133350 VTFSSIIKTRFF 133385
>emb|AJ293568.1|YDI293568 Yaba-like disease virus (YLDV), complete genome
Length = 144575
Score = 67.8 bits (164), Expect = 2e-09
Identities = 33/69 (47%), Positives = 40/69 (57%)
Frame = +3
Query: 257 MELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESK 316
+E +RSKD CGICME VY K N FG+L NCNH +C+KCI W+ K
Sbjct: 134583 LEYEDLYKRSKDKECGICMEKVYNK-NVKNIYFGVLPNCNHGFCIKCIDTWKKEK----- 134744
Query: 317 IIKSCPECR 325
K+CP CR
Sbjct: 134745 --KTCPLCR 134765
>gb|AF277170.1|AF277164S7 Homo sapiens Makorin RING zinc-finger protein 2 (MKRN2) gene, exons
7, 8 and complete cds
Length = 1096
Score = 67.0 bits (162), Expect = 4e-09
Identities = 23/39 (58%), Positives = 32/39 (81%)
Frame = +1
Query: 358 KPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRPKAQ 396
K C+YF++G+G+CPFG C Y+HAYPDGR EP++P+ Q
Sbjct: 325 KACKYFEQGKGTCPFGSKCLYRHAYPDGRLAEPEKPRKQ 441
>gb|AF380138.1|AF380138 Monkeypox virus strain Zaire-96-I-16, complete genome
Length = 196858
Score = 66.6 bits (161), Expect = 5e-09
Identities = 28/72 (38%), Positives = 44/72 (60%)
Frame = +3
Query: 266 SKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECR 325
SK+ CGIC EVVY K ++R FG+L +CNH +C+ CI W ++ E+ + +CP CR
Sbjct: 10068 SKEKECGICYEVVYSKRLENDRYFGLLDSCNHIFCITCINIWHRTRR-ETGALDNCPICR 10244
Query: 326 ITSNFVIPSEYW 337
+ S+++
Sbjct: 10245 TRFRKITMSKFY 10280
>emb|Y16780.1|VMVY16780 variola minor virus complete genome
Length = 186986
Score = 65.1 bits (157), Expect = 1e-08
Identities = 28/72 (38%), Positives = 43/72 (58%)
Frame = +3
Query: 266 SKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECR 325
SK+ CGIC EVVY K ++R FG+L +CNH +C+ CI W ++ E+ +CP CR
Sbjct: 4422 SKEKECGICYEVVYSKRLENDRYFGLLDSCNHIFCITCINIWHRTRR-ETGASDNCPICR 4598
Query: 326 ITSNFVIPSEYW 337
+ S+++
Sbjct: 4599 TRFRNITMSKFY 4634
>emb|X69198.1|VVCGAA Variola virus DNA complete genome
Length = 185578
Score = 65.1 bits (157), Expect = 1e-08
Identities = 28/72 (38%), Positives = 43/72 (58%)
Frame = +2
Query: 266 SKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECR 325
SK+ CGIC EVVY K ++R FG+L +CNH +C+ CI W ++ E+ +CP CR
Sbjct: 4388 SKEKECGICYEVVYSKRLENDRYFGLLDSCNHIFCITCINIWHRTRR-ETGASDNCPICR 4564
Query: 326 ITSNFVIPSEYW 337
+ S+++
Sbjct: 4565 TRFRNITMSKFY 4600
>gb|AF438165.1| Camelpox virus isolate M-96 from Kazakhstan, complete genome
Length = 205719
Score = 65.1 bits (157), Expect = 1e-08
Identities = 27/72 (37%), Positives = 43/72 (59%)
Frame = +1
Query: 266 SKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECR 325
SK+ CGIC E VY K + ++R FG+L +CNH +C+ CI W ++ E+ +CP CR
Sbjct: 14797 SKEKECGICYEAVYSKRSENDRYFGLLDSCNHIFCITCINIWHRTRR-ETGASDNCPICR 14973
Query: 326 ITSNFVIPSEYW 337
+ S+++
Sbjct: 14974 TRFRNITMSKFY 15009
>gb|U18338.1|VVU18338 Variola virus Garcia-1966 left near-terminal region
Length = 30288
Score = 65.1 bits (157), Expect = 1e-08
Identities = 28/72 (38%), Positives = 43/72 (58%)
Frame = +3
Query: 266 SKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECR 325
SK+ CGIC EVVY K ++R FG+L +CNH +C+ CI W ++ E+ +CP CR
Sbjct: 4422 SKEKECGICYEVVYSKRLENDRYFGLLDSCNHIFCITCINIWHRTRR-ETGASDNCPICR 4598
Query: 326 ITSNFVIPSEYW 337
+ S+++
Sbjct: 4599 TRFRNITMSKFY 4634
>emb|X94355.1|CV41KBPL Cowpox virus 41kbp fragment from left end of genome
Length = 40997
Score = 65.1 bits (157), Expect = 1e-08
Identities = 28/72 (38%), Positives = 43/72 (58%)
Frame = +1
Query: 266 SKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECR 325
SK+ CGIC EVVY K ++R FG+L +CNH +C+ CI W ++ E+ +CP CR
Sbjct: 14641 SKEKECGICYEVVYSKRLENDRYFGLLDSCNHIFCITCINIWHRTRR-ETGASDNCPICR 14817
Query: 326 ITSNFVIPSEYW 337
+ S+++
Sbjct: 14818 TRFRNITMSKFY 14853
>gb|U18337.1|VVU18337 Variola virus Congo-1965 left near-terminal region
Length = 29309
Score = 65.1 bits (157), Expect = 1e-08
Identities = 28/72 (38%), Positives = 43/72 (58%)
Frame = +2
Query: 266 SKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECR 325
SK+ CGIC EVVY K ++R FG+L +CNH +C+ CI W ++ E+ +CP CR
Sbjct: 4433 SKEKECGICYEVVYSKRLENDRYFGLLDSCNHIFCITCINIWHRTRR-ETGASDNCPICR 4609
Query: 326 ITSNFVIPSEYW 337
+ S+++
Sbjct: 4610 TRFRNITMSKFY 4645
>emb|Y11842.1|CVGRI90 Cowpox virus strain GRI-90 DNA (52 kb fragment)
Length = 52283
Score = 65.1 bits (157), Expect = 1e-08
Identities = 28/72 (38%), Positives = 43/72 (58%)
Frame = +1
Query: 266 SKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECR 325
SK+ CGIC EVVY K ++R FG+L +CNH +C+ CI W ++ E+ +CP CR
Sbjct: 25927 SKEKECGICYEVVYSKRLENDRYFGLLDSCNHIFCITCINIWHRTRR-ETGASDNCPICR 26103
Query: 326 ITSNFVIPSEYW 337
+ S+++
Sbjct: 26104 TRFRNITMSKFY 26139
>gb|L22579.1|VARCG Variola major virus (strain Bangladesh-1975) complete genome
Length = 186103
Score = 65.1 bits (157), Expect = 1e-08
Identities = 28/72 (38%), Positives = 43/72 (58%)
Frame = +3
Query: 266 SKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECR 325
SK+ CGIC EVVY K ++R FG+L +CNH +C+ CI W ++ E+ +CP CR
Sbjct: 5085 SKEKECGICYEVVYSKRLENDRYFGLLDSCNHIFCITCINIWHRTRR-ETGASDNCPICR 5261
Query: 326 ITSNFVIPSEYW 337
+ S+++
Sbjct: 5262 TRFRNITMSKFY 5297
>gb|U01161.1|U01161 Ectromelia virus Moscow p42 gene, partial cds, p28 and p16 genes,
complete cds
Length = 2060
Score = 65.1 bits (157), Expect = 1e-08
Identities = 28/72 (38%), Positives = 43/72 (58%)
Frame = +2
Query: 266 SKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECR 325
SK+ CGIC EVVY K ++R FG+L +CNH +C+ CI W ++ E+ +CP CR
Sbjct: 1253 SKEKECGICYEVVYSKRLENDRYFGLLDSCNHIFCITCINIWHRTRR-ETGASDNCPICR 1429
Query: 326 ITSNFVIPSEYW 337
+ S+++
Sbjct: 1430 TRFRNITMSKFY 1465
>gb|U18340.1|VVU18340 Variola virus Somalia-1977 left variable region
Length = 29539
Score = 64.7 bits (156), Expect = 2e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +3
Query: 266 SKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECR 325
SK+ CGIC EVVY K ++R FG+L +CNH +C+ CI W Q E+ +CP CR
Sbjct: 4644 SKEKECGICYEVVYSKRLENDRYFGLLDSCNHIFCITCINIWHRT-QRETGASDNCPICR 4820
Query: 326 ITSNFVIPSEYW 337
+ S+++
Sbjct: 4821 TRFRNITMSKFY 4856
>dbj|AB025319.1|AB025319 Yaba monkey tumor virus DNA, BamH1 restriction fragment E, M and
partial C, partial and complete cds
Length = 18274
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/60 (50%), Positives = 37/60 (61%)
Frame = +3
Query: 266 SKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECR 325
SKD C ICME VY+K N FG+LSNCNH +C++CI W+ K K+CP CR
Sbjct: 17085 SKDKECTICMEKVYDK-NVKNVYFGLLSNCNHVFCIRCIDAWKKEK-------KTCPVCR 17240
>emb|Z99260.2|SPAC3A11 S.pombe chromosome I cosmid c3A11
Length = 30562
Score = 62.4 bits (150), Expect = 9e-08
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = -1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
+ V C++F G C G NC +SHDL +C+Y+Q+G C +G C EH P
Sbjct: 28534 QHVPCKFFRQGTCTSGKNCIFSHDLELATEKTICKYFQKGNCKFGSKCALEHVLP 28370
>dbj|AB017490.1|AB017490 Schizosaccharomyces pombe DNA for 2 ORFs, partial cds
Length = 3021
Score = 62.4 bits (150), Expect = 9e-08
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = +3
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
+ V C++F G C G NC +SHDL +C+Y+Q+G C +G C EH P
Sbjct: 1380 QHVPCKFFRQGTCTSGKNCIFSHDLELATEKTICKYFQKGNCKFGSKCALEHVLP 1544
>gb|AF325528.1|AF325528 Lumpy skin disease virus isolate Neethling 2490, complete genome
Length = 150773
Score = 57.0 bits (136), Expect = 4e-06
Identities = 28/72 (38%), Positives = 41/72 (56%)
Frame = +1
Query: 266 SKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECR 325
S++ C +C+E VY+K S FGIL NC+H +C++CI W+ K +CP CR
Sbjct: 133090 SEEKECAVCLEKVYDKEYDS-MYFGILPNCDHVFCIECINIWK-------KENSTCPVCR 133245
Query: 326 ITSNFVIPSEYW 337
FVI S ++
Sbjct: 133246 NEFLFVIKSRFF 133281
>gb|AF264786.1|AF264786 Pichia angusta Mnn9p (MNN9) gene, complete cds
Length = 3463
Score = 56.2 bits (134), Expect = 6e-06
Identities = 21/66 (31%), Positives = 34/66 (50%)
Frame = +3
Query: 52 VTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQEEEL 111
V C++F G C+ G++C +SH + VC+Y+Q+G C +G C H P +
Sbjct: 2979 VPCKFFKQGACQAGNSCPFSHSTESASETNVCKYFQKGNCRFGAKCALAHVLPDGRRVNS 3158
Query: 112 TTVNPA 117
+ PA
Sbjct: 3159 KSTKPA 3176
Score = 35.8 bits (81), Expect = 8.7
Identities = 17/46 (36%), Positives = 23/46 (49%), Gaps = 5/46 (10%)
Frame = +3
Query: 354 AMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQ-----EEPQRPK 394
A C+YF +G+C FG C H PDGR+ +P RP+
Sbjct: 3054 ASETNVCKYFQ--KGNCRFGAKCALAHVLPDGRRVNSKSTKPARPR 3185
>ref|XM_028253.1| Homo sapiens chromosome 19 open reading frame 7 (C19orf7), mRNA
Length = 5264
Score = 55.8 bits (133), Expect = 8e-06
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +2
Query: 51 QVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
+V C+YF+ G C GD+C +SHD+ + +C++Y G CA ++C Y H
Sbjct: 365 KVICKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMH 517
Score = 40.0 bits (92), Expect = 0.46
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 72 HDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQEEEL 111
H S + ++C+Y+ G C +GDHC + H L ++ EL
Sbjct: 341 HQQSDKKGKVICKYFVEGRCTWGDHCNFSHDIELPKKREL 460
Score = 38.9 bits (89), Expect = 1.0
Identities = 19/60 (31%), Positives = 29/60 (47%), Gaps = 1/60 (1%)
Frame = +2
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCR-YYQRGCCAYGDHCRYEHTKPLMQE 108
K+ C++++ G C +NC Y H C+ Y+ G C GD C + H PL +E
Sbjct: 449 KRELCKFYITGFCARAENCPYMH------GDFPCKLYHTTGNCINGDDCMFSH-DPLTEE 607
>dbj|AB028987.1|AB028987 Homo sapiens mRNA for KIAA1064 protein, partial cds
Length = 5265
Score = 55.8 bits (133), Expect = 8e-06
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +2
Query: 51 QVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
+V C+YF+ G C GD+C +SHD+ + +C++Y G CA ++C Y H
Sbjct: 365 KVICKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMH 517
Score = 40.0 bits (92), Expect = 0.46
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 72 HDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQEEEL 111
H S + ++C+Y+ G C +GDHC + H L ++ EL
Sbjct: 341 HQQSDKKGKVICKYFVEGRCTWGDHCNFSHDIELPKKREL 460
Score = 38.9 bits (89), Expect = 1.0
Identities = 19/60 (31%), Positives = 29/60 (47%), Gaps = 1/60 (1%)
Frame = +2
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCR-YYQRGCCAYGDHCRYEHTKPLMQE 108
K+ C++++ G C +NC Y H C+ Y+ G C GD C + H PL +E
Sbjct: 449 KRELCKFYITGFCARAENCPYMH------GDFPCKLYHTTGNCINGDDCMFSH-DPLTEE 607
>gb|AC022344.2|AC022344 Drosophila melanogaster, chromosome X, region 12F-13A, BAC clone
BACR30H22, complete sequence
Length = 157308
Score = 55.8 bits (133), Expect = 8e-06
Identities = 23/51 (45%), Positives = 26/51 (50%)
Frame = +1
Query: 330 FVIPSEYWVXXXXXXXXXXXXXXXAMSNKPCRYFDEGRGSCPFGGNCFYKH 380
FV PS YWV AM K C+YF+ G G CPFG CFY+H
Sbjct: 4 FVCPSAYWVDTKEEKDKLLSEYRAAMGAKDCKYFNGGLGKCPFGNKCFYRH 156
>ref|NM_020594.1| Mus musculus fetal liver zinc finger 1 (Fliz1-pending), mRNA
Length = 1601
Score = 55.1 bits (131), Expect = 1e-05
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +3
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTK 103
KQV C+YF+ C +GD C++ HD + +C+YY +G C G++C Y H++
Sbjct: 726 KQV-CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKYYVQGYCTKGENCLYLHSE 884
Score = 35.8 bits (81), Expect = 8.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 200 KKQLCPYAAVGECRYGENCVYIHGD 224
KK++C Y G C GENC+Y+H +
Sbjct: 810 KKEMCKYYVQGYCTKGENCLYLHSE 884
>gb|AF061961.1|AF061961 Mus musculus putative zinc finger protein FLIZ1 (Fliz1) mRNA,
complete cds
Length = 1601
Score = 55.1 bits (131), Expect = 1e-05
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +3
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTK 103
KQV C+YF+ C +GD C++ HD + +C+YY +G C G++C Y H++
Sbjct: 726 KQV-CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKYYVQGYCTKGENCLYLHSE 884
Score = 35.8 bits (81), Expect = 8.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 200 KKQLCPYAAVGECRYGENCVYIHGD 224
KK++C Y G C GENC+Y+H +
Sbjct: 810 KKEMCKYYVQGYCTKGENCLYLHSE 884
>emb|AL031538.1|SPCC1906 S.pombe chromosome III cosmid c1906
Length = 15252
Score = 54.3 bits (129), Expect = 2e-05
Identities = 20/55 (36%), Positives = 32/55 (57%)
Frame = +2
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
+ V C++F +G C G+NC +SH L T + +C+Y+ +G C +G C H P
Sbjct: 14240 QHVPCKFFRNGTCTAGENCPFSHSLETERP--ICKYFLKGNCKFGPKCALSHALP 14398
>gb|AF170722.1|AF170722 Rabbit fibroma virus, complete genome
Length = 159857
Score = 53.9 bits (128), Expect = 3e-05
Identities = 27/73 (36%), Positives = 39/73 (52%)
Frame = +2
Query: 265 RSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPEC 324
R K C ICME +Y K+ + FG+LS+CNH +C++CI +W+ K CP C
Sbjct: 137633 RYKGEECAICMEPIYNKSIKNSF-FGVLSHCNHIFCIECIDRWK-------KQNNKCPVC 137788
Query: 325 RITSNFVIPSEYW 337
R V S ++
Sbjct: 137789 RTIFISVTKSRFF 137827
>gb|L26342.1|RBFN1RAAA Rabbit fibroma virus N1R gene, complete cds
Length = 2005
Score = 53.9 bits (128), Expect = 3e-05
Identities = 27/73 (36%), Positives = 39/73 (52%)
Frame = +2
Query: 265 RSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPEC 324
R K C ICME +Y K+ + FG+LS+CNH +C++CI +W+ K CP C
Sbjct: 1163 RYKGEECAICMEPIYNKSIKNSF-FGVLSHCNHIFCIECIDRWK-------KQNNKCPVC 1318
Query: 325 RITSNFVIPSEYW 337
R V S ++
Sbjct: 1319 RTIFISVTKSRFF 1357
>gb|AF170726.2| Myxoma virus strain Lausanne, complete genome
Length = 161773
Score = 53.5 bits (127), Expect = 4e-05
Identities = 27/67 (40%), Positives = 36/67 (53%)
Frame = +2
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNF 330
C ICME VY K S FG+LS+CNH +C++CI +W+ K CP CR
Sbjct: 139181 CAICMEPVYAKPIKSSF-FGVLSHCNHVFCIECIDRWK-------KQNNKCPVCRTIFVS 139336
Query: 331 VIPSEYW 337
V S ++
Sbjct: 139337 VTKSRFF 139357
>ref|XM_091691.1| Homo sapiens LOC147234 (LOC147234), mRNA
Length = 537
Score = 53.5 bits (127), Expect = 4e-05
Identities = 21/57 (36%), Positives = 34/57 (58%)
Frame = +1
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQEEE 110
C +F G+C++G C + HD G+ +VC+++ RG C GDHC++ H L + E
Sbjct: 121 CNFFTKGLCEKGKLCPFRHD--RGEKMVVCKHWLRGLCKKGDHCKFLHQYDLTRMPE 285
Score = 43.9 bits (102), Expect = 0.032
Identities = 17/61 (27%), Positives = 33/61 (53%)
Frame = +1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQEE 109
K V C++++ G+CK+GD+C++ H + Y + G C+ C + H KP + +
Sbjct: 190 KMVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECYFYSKFGDCS-NKECSFLHVKPAFKSQ 366
Query: 110 E 110
+
Sbjct: 367 D 369
Score = 37.7 bits (86), Expect = 2.3
Identities = 17/54 (31%), Positives = 25/54 (45%)
Frame = +1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTK 103
K C ++ G CK+G C+Y H ++C Y G C G C++ H K
Sbjct: 358 KSQDCPWYDQGFCKDGPLCKYRH-----VPRIMCLNYLVGFCPEGPKCQFAHPK 504
>ref|NM_032494.1| Homo sapiens zinc finger protein (LOC84524), mRNA
Length = 1595
Score = 53.1 bits (126), Expect = 5e-05
Identities = 19/54 (35%), Positives = 34/54 (62%)
Frame = +3
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTK 103
KQ+ C+YF+ C +GD C++ HD + +C++Y +G C+ G++C Y H +
Sbjct: 672 KQI-CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGFCSRGENCLYLHNE 830
>gb|AF334161.1|AF334161 Homo sapiens zinc finger protein mRNA, complete cds
Length = 1595
Score = 53.1 bits (126), Expect = 5e-05
Identities = 19/54 (35%), Positives = 34/54 (62%)
Frame = +3
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTK 103
KQ+ C+YF+ C +GD C++ HD + +C++Y +G C+ G++C Y H +
Sbjct: 672 KQI-CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGFCSRGENCLYLHNE 830
>ref|XM_046053.3| Homo sapiens zinc finger protein (LOC84524), mRNA
Length = 1625
Score = 52.8 bits (125), Expect = 7e-05
Identities = 19/54 (35%), Positives = 33/54 (60%)
Frame = +2
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTK 103
KQ+ C+YF+ C +GD C++ HD + +C++Y +G C G++C Y H +
Sbjct: 710 KQI-CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNE 868
>gb|M22812.1|VACLEND Vaccinia virus genome, left end
Length = 14520
Score = 42.0 bits (97), Expect(2) = 4e-04
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 285 SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYW 337
++R FG+L +C H +C+ CI W ++ E+ +CP CR + S+++
Sbjct: 825 NDRYFGLLDSCTHIFCITCINIWHKTRR-ETGASDNCPICRTRFRNITMSKFY 980
Score = 27.7 bits (60), Expect(2) = 4e-04
Identities = 11/16 (68%), Positives = 12/16 (74%)
Frame = +2
Query: 266 SKDMVCGICMEVVYEK 281
SK+ CGIC EVVY K
Sbjct: 779 SKEKECGICYEVVYSK 826
>ref|NM_125075.1| unknown protein
Length = 2028
Score = 50.1 bits (118), Expect = 4e-04
Identities = 18/48 (37%), Positives = 26/48 (53%)
Frame = +1
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
CR+++ G C EGD C++SHD C Y+ C GD C ++H
Sbjct: 1066 CRHYLKGRCHEGDKCKFSHDTIPETKCSPCCYFATQSCMKGDDCPFDH 1209
Score = 38.9 bits (89), Expect = 1.0
Identities = 19/53 (35%), Positives = 25/53 (46%)
Frame = +1
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
TK C YF C +GD+C + HDLS + +G C GD C + H
Sbjct: 1138 TKCSPCCYFATQSCMKGDDCPFDHDLS---KYPCNNFITKGFCYRGDSCLFSH 1287
>gb|U39205.1|SCU39205 Saccharomyces cerevisiae chromosome XVI, left arm, cosmid 8460
Length = 37947
Score = 48.5 bits (114), Expect = 0.001
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Frame = +3
Query: 52 VTCRYFMHGVCKEGDNCRYSH--DLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP----L 105
V C++F G C+ G +C +SH D+ + + + C+Y+ +G C +G+ C H P +
Sbjct: 33195 VPCKFFKMGNCQAGSSCPFSHSPDIISSANNLPCKYFAKGNCKFGNKCVNAHVLPNGFKM 33374
Query: 106 MQEEELTTVNPAAKTYPS 123
+E + P+ Y S
Sbjct: 33375 NSKEPIDITPPSQNNYLS 33428
Score = 35.8 bits (81), Expect = 8.7
Identities = 14/38 (36%), Positives = 21/38 (54%)
Frame = +3
Query: 356 SNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRP 393
+N PC+YF +G+C FG C H P+G + + P
Sbjct: 33282 NNLPCKYF--AKGNCKFGNKCVNAHVLPNGFKMNSKEP 33389
>ref|NM_125268.1| Expressed protein
Length = 1167
Score = 48.5 bits (114), Expect = 0.001
Identities = 26/85 (30%), Positives = 39/85 (45%)
Frame = +2
Query: 254 EKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQF 313
+KD ++ ++ CGICME+ + +L NC H+ C+KC R WR Q
Sbjct: 563 KKDESEMSEIEIEREEECGICMEMNSKV---------VLPNCTHSLCIKCYRDWRGRSQ- 712
Query: 314 ESKIIKSCPECRITSNFVIPSEYWV 338
SCP CR + V + W+
Sbjct: 713 ------SCPFCRDSLKRVDSGDLWM 769
>emb|X86735.1|SCLEE1GE S.cerevisiae LEE1 gene
Length = 906
Score = 48.5 bits (114), Expect = 0.001
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Frame = +1
Query: 52 VTCRYFMHGVCKEGDNCRYSH--DLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP----L 105
V C++F G C+ G +C +SH D+ + + + C+Y+ +G C +G+ C H P +
Sbjct: 271 VPCKFFKMGNCQAGSSCPFSHSPDIISSANNLPCKYFAKGNCKFGNKCVNAHVLPNGFKM 450
Query: 106 MQEEELTTVNPAAKTYPS 123
+E + P+ Y S
Sbjct: 451 NSKEPIDITPPSQNNYLS 504
Score = 35.8 bits (81), Expect = 8.7
Identities = 14/38 (36%), Positives = 21/38 (54%)
Frame = +1
Query: 356 SNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRQEEPQRP 393
+N PC+YF +G+C FG C H P+G + + P
Sbjct: 358 NNLPCKYF--AKGNCKFGNKCVNAHVLPNGFKMNSKEP 465
>gb|U94848.1|U94848 Vaccinia virus strain Ankara, complete genomic sequence
Length = 177923
Score = 42.7 bits (99), Expect(2) = 0.001
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1
Query: 285 SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECR 325
++R FG+L +CNH +C+ CI W ++ E+ +CP CR
Sbjct: 12742 NDRYFGLLDSCNHIFCITCINIWHRTRR-ETGASDNCPICR 12861
Score = 24.6 bits (52), Expect(2) = 0.001
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 266 SKDMVCGICMEVVYEK 281
SK+ C IC EVVY K
Sbjct: 12696 SKEKECEICYEVVYSK 12743
>gb|U70479.1|DRU70479 Danio rerio no arches (nar) mRNA, complete cds
Length = 1879
Score = 48.1 bits (113), Expect = 0.002
Identities = 18/48 (37%), Positives = 27/48 (55%)
Frame = +3
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
C YFM C +G C + H +G+ +VC+++ RG C GD C + H
Sbjct: 414 CEYFMRAACMKGGMCPFRH--ISGEKTVVCKHWLRGLCKKGDQCEFLH 551
Score = 45.8 bits (107), Expect = 0.008
Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 27/98 (27%)
Frame = +3
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHD---------------------------LSTGQSAMV 82
K V C++++ G+CK+GD C + H+ +
Sbjct: 483 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKD 662
Query: 83 CRYYQRGCCAYGDHCRYEHTKPLMQEEELTTVNPAAKT 120
C +Y RG C +G CR+ HT+ ++ L P K+
Sbjct: 663 CPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKS 776
Score = 36.6 bits (83), Expect = 5.1
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTK 103
C ++ G CK G +CR+ H ++C Y G C G C++ H +
Sbjct: 663 CPWYDRGFCKHGPDCRHRHT-----RRVICVNYLVGFCPEGKSCKFMHPR 797
>ref|NM_120230.1| putative protein
Length = 1269
Score = 47.8 bits (112), Expect = 0.002
Identities = 23/76 (30%), Positives = 35/76 (45%)
Frame = +3
Query: 263 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 322
+ ++ CGIC+E+ R +L CNH+ C+ C R WR+ Q SCP
Sbjct: 777 IDLEREEECGICLEI---------RNKVVLPTCNHSMCINCYRNWRARSQ-------SCP 908
Query: 323 ECRITSNFVIPSEYWV 338
CR + V + W+
Sbjct: 909 FCRGSLKRVNSGDLWI 956
>ref|NM_114579.1| putative RNA-binding protein
Length = 1059
Score = 47.8 bits (112), Expect = 0.002
Identities = 24/69 (34%), Positives = 32/69 (45%), Gaps = 21/69 (30%)
Frame = +1
Query: 54 CRYFMHGVCKEGDNCRYSHD----LSTG-----------------QSAMVCRYYQRGCCA 92
CR F G C GD+C++SHD +TG + VCR +QRG C
Sbjct: 406 CRAFQRGECTRGDSCKFSHDEKRAANTGWGHEEDRSSKWDHDKNREGRGVCRAFQRGECT 585
Query: 93 YGDHCRYEH 101
GD C++ H
Sbjct: 586 RGDSCKFSH 612
>gb|AY050835.1| Arabidopsis thaliana putative C3HC4 type Zinc RING finger
(F7A7_40/AT5g01520) mRNA, complete cds
Length = 1285
Score = 47.8 bits (112), Expect = 0.002
Identities = 23/76 (30%), Positives = 35/76 (45%)
Frame = +3
Query: 263 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 322
+ ++ CGIC+E+ R +L CNH+ C+ C R WR+ Q SCP
Sbjct: 777 IDLEREEECGICLEI---------RNKVVLPTCNHSMCINCYRNWRARSQ-------SCP 908
Query: 323 ECRITSNFVIPSEYWV 338
CR + V + W+
Sbjct: 909 FCRGSLKRVNSGDLWI 956
>gb|U26549.1|DMU26549 Drosophila melanogaster zinc finger protein (c6a) mRNA, complete
cds
Length = 1246
Score = 47.4 bits (111), Expect = 0.003
Identities = 21/96 (21%), Positives = 41/96 (41%), Gaps = 27/96 (28%)
Frame = +2
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHD---------------------------LSTGQSAMV 82
+ + C++++ G+CK+GD C + H+ +
Sbjct: 311 RTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPQSKVKD 490
Query: 83 CRYYQRGCCAYGDHCRYEHTKPLMQEEELTTVNPAA 118
C +Y+RG C +G HCR++H + ++ + L P A
Sbjct: 491 CPWYKRGFCRHGPHCRHQHLRRVLCMDYLAGFCPEA 598
Score = 36.2 bits (82), Expect = 6.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 62 CKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
C +G C + H G +VC+++ RG C GD C + H
Sbjct: 266 CDKGSACPFRH--IRGDRTIVCKHWLRGLCKKGDQCEFLH 379
>gb|AC092222.1|AC092222 Drosophila melanogaster, chromosome 2L, region 21D-21E, BAC clone
BACR16I01, complete sequence
Length = 165652
Score = 46.2 bits (108), Expect = 0.006
Identities = 18/84 (21%), Positives = 37/84 (43%), Gaps = 27/84 (32%)
Frame = +2
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHD---------------------------LSTGQSAMV 82
+ + C++++ G+CK+GD C + H+ +
Sbjct: 19313 RTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPQSKVKD 19492
Query: 83 CRYYQRGCCAYGDHCRYEHTKPLM 106
C +Y+RG C +G HCR++H + ++
Sbjct: 19493 CPWYKRGFCRHGPHCRHQHLRRVL 19564
Score = 36.2 bits (82), Expect = 6.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 62 CKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
C +G C + H G +VC+++ RG C GD C + H
Sbjct: 19268 CDKGSACPFRH--IRGDRTIVCKHWLRGLCKKGDQCEFLH 19381
Score = 36.2 bits (82), Expect = 6.7
Identities = 15/53 (28%), Positives = 25/53 (46%)
Frame = +2
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
+K C ++ G C+ G +CR+ H ++C Y G C G C++ H
Sbjct: 19478 SKVKDCPWYKRGFCRHGPHCRHQH-----LRRVLCMDYLAGFCPEGPSCKHMH 19621
>gb|AC004546.1|AC004546 Drosophila melanogaster DNA sequence (P1s DS02684 (D134) and DS00269
(D131)), complete sequence
Length = 102389
Score = 46.2 bits (108), Expect = 0.006
Identities = 18/84 (21%), Positives = 37/84 (43%), Gaps = 27/84 (32%)
Frame = -3
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHD---------------------------LSTGQSAMV 82
+ + C++++ G+CK+GD C + H+ +
Sbjct: 97401 RTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPQSKVKD 97222
Query: 83 CRYYQRGCCAYGDHCRYEHTKPLM 106
C +Y+RG C +G HCR++H + ++
Sbjct: 97221 CPWYKRGFCRHGPHCRHQHLRRVL 97150
Score = 36.2 bits (82), Expect = 6.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 62 CKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
C +G C + H G +VC+++ RG C GD C + H
Sbjct: 97446 CDKGSACPFRH--IRGDRTIVCKHWLRGLCKKGDQCEFLH 97333
Score = 36.2 bits (82), Expect = 6.7
Identities = 15/53 (28%), Positives = 25/53 (46%)
Frame = -3
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
+K C ++ G C+ G +CR+ H ++C Y G C G C++ H
Sbjct: 97236 SKVKDCPWYKRGFCRHGPHCRHQH-----LRRVLCMDYLAGFCPEGPSCKHMH 97093
>gb|AE003588.2|AE003588 Drosophila melanogaster genomic scaffold 142000013386046 section 3 of 16,
complete sequence
Length = 299378
Score = 46.2 bits (108), Expect = 0.006
Identities = 18/84 (21%), Positives = 37/84 (43%), Gaps = 27/84 (32%)
Frame = +2
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHD---------------------------LSTGQSAMV 82
+ + C++++ G+CK+GD C + H+ +
Sbjct: 199349 RTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPQSKVKD 199528
Query: 83 CRYYQRGCCAYGDHCRYEHTKPLM 106
C +Y+RG C +G HCR++H + ++
Sbjct: 199529 CPWYKRGFCRHGPHCRHQHLRRVL 199600
Score = 36.2 bits (82), Expect = 6.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 62 CKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
C +G C + H G +VC+++ RG C GD C + H
Sbjct: 199304 CDKGSACPFRH--IRGDRTIVCKHWLRGLCKKGDQCEFLH 199417
Score = 36.2 bits (82), Expect = 6.7
Identities = 15/53 (28%), Positives = 25/53 (46%)
Frame = +2
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
+K C ++ G C+ G +CR+ H ++C Y G C G C++ H
Sbjct: 199514 SKVKDCPWYKRGFCRHGPHCRHQH-----LRRVLCMDYLAGFCPEGPSCKHMH 199657
>ref|NM_057808.1| Drosophila melanogaster Clipper (Clp), transcript variant
Clp-P1|CDS, mRNA
Length = 891
Score = 46.2 bits (108), Expect = 0.006
Identities = 18/84 (21%), Positives = 37/84 (43%), Gaps = 27/84 (32%)
Frame = +1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHD---------------------------LSTGQSAMV 82
+ + C++++ G+CK+GD C + H+ +
Sbjct: 196 RTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPQSKVKD 375
Query: 83 CRYYQRGCCAYGDHCRYEHTKPLM 106
C +Y+RG C +G HCR++H + ++
Sbjct: 376 CPWYKRGFCRHGPHCRHQHLRRVL 447
Score = 36.2 bits (82), Expect = 6.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 62 CKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
C +G C + H G +VC+++ RG C GD C + H
Sbjct: 151 CDKGSACPFRH--IRGDRTIVCKHWLRGLCKKGDQCEFLH 264
Score = 36.2 bits (82), Expect = 6.7
Identities = 15/53 (28%), Positives = 25/53 (46%)
Frame = +1
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
+K C ++ G C+ G +CR+ H ++C Y G C G C++ H
Sbjct: 361 SKVKDCPWYKRGFCRHGPHCRHQH-----LRRVLCMDYLAGFCPEGPSCKHMH 504
>ref|NG_000517.1| Drosophila melanogaster Clipper (Clp) on chromosome 2
Length = 10924
Score = 46.2 bits (108), Expect = 0.006
Identities = 18/84 (21%), Positives = 37/84 (43%), Gaps = 27/84 (32%)
Frame = +3
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHD---------------------------LSTGQSAMV 82
+ + C++++ G+CK+GD C + H+ +
Sbjct: 4989 RTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPQSKVKD 5168
Query: 83 CRYYQRGCCAYGDHCRYEHTKPLM 106
C +Y+RG C +G HCR++H + ++
Sbjct: 5169 CPWYKRGFCRHGPHCRHQHLRRVL 5240
Score = 36.2 bits (82), Expect = 6.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 62 CKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
C +G C + H G +VC+++ RG C GD C + H
Sbjct: 4944 CDKGSACPFRH--IRGDRTIVCKHWLRGLCKKGDQCEFLH 5057
Score = 36.2 bits (82), Expect = 6.7
Identities = 15/53 (28%), Positives = 25/53 (46%)
Frame = +3
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
+K C ++ G C+ G +CR+ H ++C Y G C G C++ H
Sbjct: 5154 SKVKDCPWYKRGFCRHGPHCRHQH-----LRRVLCMDYLAGFCPEGPSCKHMH 5297
>ref|NM_069034.1| Caenorhabditis elegans
Length = 1725
Score = 45.4 bits (106), Expect = 0.011
Identities = 18/54 (33%), Positives = 27/54 (49%), Gaps = 1/54 (1%)
Frame = +1
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTG-QSAMVCRYYQRGCCAYGDHCRYEH 101
T+ C++F G C++GDNC YSH + ++C +Y C G C H
Sbjct: 496 TEHQICKFFREGYCRDGDNCLYSHQAEDSLRRPVLCNFYANSFCKKGLQCLMLH 657
>ref|NM_006693.1| Homo sapiens cleavage and polyadenylation specific factor 4, 30kD
subunit (CPSF4), mRNA
Length = 1717
Score = 44.7 bits (104), Expect = 0.019
Identities = 16/48 (33%), Positives = 27/48 (55%)
Frame = +1
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
C +F+ C +G C + H +G+ +VC+++ RG C GD C + H
Sbjct: 157 CEFFLKAACGKGGMCPFRH--ISGEKTVVCKHWLRGLCKKGDQCEFLH 294
Score = 43.9 bits (102), Expect = 0.032
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 27/81 (33%)
Frame = +1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHD---------------------------LSTGQSAMV 82
K V C++++ G+CK+GD C + H+ +
Sbjct: 226 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKD 405
Query: 83 CRYYQRGCCAYGDHCRYEHTK 103
C +Y RG C +G CR+ HT+
Sbjct: 406 CPWYDRGFCKHGPLCRHRHTR 468
>gb|U79569.1|HSU79569 Human no arches (nar) mRNA, complete cds
Length = 1717
Score = 44.7 bits (104), Expect = 0.019
Identities = 16/48 (33%), Positives = 27/48 (55%)
Frame = +1
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
C +F+ C +G C + H +G+ +VC+++ RG C GD C + H
Sbjct: 157 CEFFLKAACGKGGMCPFRH--ISGEKTVVCKHWLRGLCKKGDQCEFLH 294
Score = 43.9 bits (102), Expect = 0.032
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 27/81 (33%)
Frame = +1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHD---------------------------LSTGQSAMV 82
K V C++++ G+CK+GD C + H+ +
Sbjct: 226 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKD 405
Query: 83 CRYYQRGCCAYGDHCRYEHTK 103
C +Y RG C +G CR+ HT+
Sbjct: 406 CPWYDRGFCKHGPLCRHRHTR 468
>gb|AF033201.1|AF033201 Mus musculus clipper/cleavage and polyadenylation specificity
factor 30 kDa subunit homolog mRNA, partial cds
Length = 1416
Score = 44.7 bits (104), Expect = 0.019
Identities = 16/48 (33%), Positives = 27/48 (55%)
Frame = +1
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
C +F+ C +G C + H +G+ +VC+++ RG C GD C + H
Sbjct: 82 CEFFLKAACGKGGMCPFRH--ISGEKTVVCKHWLRGLCKKGDQCEFLH 219
Score = 43.9 bits (102), Expect = 0.032
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 27/81 (33%)
Frame = +1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHD---------------------------LSTGQSAMV 82
K V C++++ G+CK+GD C + H+ +
Sbjct: 151 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKD 330
Query: 83 CRYYQRGCCAYGDHCRYEHTK 103
C +Y RG C +G CR+ HT+
Sbjct: 331 CPWYDRGFCKHGPLCRHRHTR 393
>gb|U96448.1|BTU96448 Bos taurus cleavage and polyadenylation specificity factor 30 kDa
subunit mRNA, complete cds
Length = 1667
Score = 44.7 bits (104), Expect = 0.019
Identities = 16/48 (33%), Positives = 27/48 (55%)
Frame = +3
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
C +F+ C +G C + H +G+ +VC+++ RG C GD C + H
Sbjct: 252 CEFFLKAACGKGGMCPFRH--ISGEKTVVCKHWLRGLCKKGDQCEFLH 389
Score = 43.9 bits (102), Expect = 0.032
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 27/81 (33%)
Frame = +3
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHD---------------------------LSTGQSAMV 82
K V C++++ G+CK+GD C + H+ +
Sbjct: 321 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKD 500
Query: 83 CRYYQRGCCAYGDHCRYEHTK 103
C +Y RG C +G CR+ HT+
Sbjct: 501 CPWYDRGFCKHGPLCRHRHTR 563
>gb|BC003101.1|BC003101 Homo sapiens, Similar to cleavage and polyadenylation specific
factor 4, 30kD subunit, clone MGC:1870 IMAGE:3356071,
mRNA, complete cds
Length = 1724
Score = 44.7 bits (104), Expect = 0.019
Identities = 16/48 (33%), Positives = 27/48 (55%)
Frame = +2
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
C +F+ C +G C + H +G+ +VC+++ RG C GD C + H
Sbjct: 179 CEFFLKAACGKGGMCPFRH--ISGEKTVVCKHWLRGLCKKGDQCEFLH 316
Score = 43.9 bits (102), Expect = 0.032
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 27/81 (33%)
Frame = +2
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHD---------------------------LSTGQSAMV 82
K V C++++ G+CK+GD C + H+ +
Sbjct: 248 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKD 427
Query: 83 CRYYQRGCCAYGDHCRYEHTK 103
C +Y RG C +G CR+ HT+
Sbjct: 428 CPWYDRGFCKHGPLCRHRHTR 490
>emb|Y17326.1|RNY17326 Rattus norvegicus CDK106 mRNA
Length = 1321
Score = 44.7 bits (104), Expect = 0.019
Identities = 16/48 (33%), Positives = 27/48 (55%)
Frame = +1
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
C +F+ C +G C + H +G+ +VC+++ RG C GD C + H
Sbjct: 118 CEFFLKAACGKGGMCPFRH--ISGEKTVVCKHWLRGLCKKGDQCEFLH 255
Score = 38.1 bits (87), Expect = 1.8
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
K V C++++ G+CK+GD C + H+ + Y + G C+ C + H P
Sbjct: 187 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECS-NKECPFLHIDP 348
>ref|NM_114583.1| RNA-binding protein-like protein
Length = 1089
Score = 44.7 bits (104), Expect = 0.019
Identities = 22/68 (32%), Positives = 30/68 (43%)
Frame = +2
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNF 330
CGICME+ +L NC H+ C+KC R W + SCP CR +
Sbjct: 542 CGICMEM---------NNMVVLPNCTHSLCIKCYRDWHGRSE-------SCPFCRDSLKR 673
Query: 331 VIPSEYWV 338
V + W+
Sbjct: 674 VNSGDLWM 697
>gb|U32445.1|YSCP8283 Saccharomyces cerevisiae chromosome XVI cosmid 8283
Length = 39141
Score = 44.3 bits (103), Expect = 0.025
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = -1
Query: 51 QVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKP 104
++ CR+++ G+CK+ D C Y H+ + + + + G C C+Y H P
Sbjct: 13437 KIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYCTQSPDCQYLHIDP 13276
Score = 38.9 bits (89), Expect = 1.0
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -1
Query: 62 CKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQEEE 110
C G C H L Q+ +VCR++ RG C D C Y H L + E
Sbjct: 13491 CPRGPLCPKKHVLPIFQNKIVCRHWLRGLCKKNDQCEYLHEYNLRKMPE 13345
>gb|AC005770.2|AC005770 Arabidopsis thaliana chromosome II section 210 of 255 of the complete
sequence. Sequence from clones F13I13, T7F6, T16B24
Length = 101386
Score = 44.3 bits (103), Expect = 0.025
Identities = 24/64 (37%), Positives = 34/64 (52%), Gaps = 2/64 (3%)
Frame = +1
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPEC--RITS 328
C IC+E + E+ R +++ C H YCL CIRKW S K ++CP C R S
Sbjct: 90385 CPICLENLTER-----RSAAVITVCKHGYCLACIRKWSSFK-------RNCPLCNTRFDS 90528
Query: 329 NFVI 332
F++
Sbjct: 90529 WFIV 90540
>gb|AY065197.1| Arabidopsis thaliana putative RING zinc finger protein (At2g39100;
T7F6.27) mRNA, complete cds
Length = 1289
Score = 44.3 bits (103), Expect = 0.025
Identities = 24/64 (37%), Positives = 34/64 (52%), Gaps = 2/64 (3%)
Frame = +1
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPEC--RITS 328
C IC+E + E+ R +++ C H YCL CIRKW S K ++CP C R S
Sbjct: 139 CPICLENLTER-----RSAAVITVCKHGYCLACIRKWSSFK-------RNCPLCNTRFDS 282
Query: 329 NFVI 332
F++
Sbjct: 283 WFIV 294
>ref|NM_129467.1| putative RING zinc finger protein
Length = 813
Score = 44.3 bits (103), Expect = 0.025
Identities = 24/64 (37%), Positives = 34/64 (52%), Gaps = 2/64 (3%)
Frame = +1
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPEC--RITS 328
C IC+E + E+ R +++ C H YCL CIRKW S K ++CP C R S
Sbjct: 115 CPICLENLTER-----RSAAVITVCKHGYCLACIRKWSSFK-------RNCPLCNTRFDS 258
Query: 329 NFVI 332
F++
Sbjct: 259 WFIV 270
>dbj|D63484.1|D63484 Human mRNA for KIAA0150 gene, partial cds
Length = 3231
Score = 43.9 bits (102), Expect = 0.032
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +2
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHT 102
K C YF+ G+C NC YSH + + A VC + +G C G C+ +HT
Sbjct: 2162 KMPVCSYFLKGICSNS-NCPYSH-VYVSRKAEVCSDFLKGYCPLGAKCKKKHT 2314
>ref|XM_055745.1| Homo sapiens similar to KIAA0150 protein (H. sapiens) (LOC143612),
mRNA
Length = 1683
Score = 43.9 bits (102), Expect = 0.032
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +2
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHT 102
K C YF+ G+C NC YSH + + A VC + +G C G C+ +HT
Sbjct: 614 KMPVCSYFLKGICSNS-NCPYSH-VYVSRKAEVCSDFLKGYCPLGAKCKKKHT 766
>gb|BC001974.1|BC001974 Homo sapiens, clone IMAGE:3457069, mRNA, partial cds
Length = 2445
Score = 43.9 bits (102), Expect = 0.032
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +3
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHT 102
K C YF+ G+C NC YSH + + A VC + +G C G C+ +HT
Sbjct: 825 KMPVCSYFLKGICSNS-NCPYSH-VYVSRKAEVCSDFLKGYCPLGAKCKKKHT 977
>ref|NM_101190.1| Expressed protein
Length = 1212
Score = 43.9 bits (102), Expect = 0.032
Identities = 23/68 (33%), Positives = 30/68 (43%)
Frame = +2
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNF 330
CGIC+E + +L NC H+ C+KC R W Q SCP CR +
Sbjct: 719 CGICLETCTKM---------VLPNCCHSMCIKCYRNWNLKSQ-------SCPFCRGSMKR 850
Query: 331 VIPSEYWV 338
V + WV
Sbjct: 851 VNSEDLWV 874
>ref|XM_049226.3| Homo sapiens KIAA0150 protein (KIAA0150), mRNA
Length = 3253
Score = 43.9 bits (102), Expect = 0.032
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +2
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHT 102
K C YF+ G+C NC YSH + + A VC + +G C G C+ +HT
Sbjct: 2186 KMPVCSYFLKGICSNS-NCPYSH-VYVSRKAEVCSDFLKGYCPLGAKCKKKHT 2338
>gb|AF180293.1|AF180293 Medicago truncatula MTD2 mRNA, complete cds
Length = 859
Score = 43.9 bits (102), Expect = 0.032
Identities = 27/81 (33%), Positives = 37/81 (45%)
Frame = +1
Query: 258 ELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKI 317
E ++R K+ CG+C+EV KA +L NC H C KC R+W Q
Sbjct: 448 ESKIDIEREKE--CGVCLEV---KAKV------VLPNCCHQMCFKCYREWCLRSQ----- 579
Query: 318 IKSCPECRITSNFVIPSEYWV 338
SCP CR + V + W+
Sbjct: 580 --SCPFCRDSLKRVNSGDLWI 636
>ref|NM_102782.1| hypothetical protein
Length = 2037
Score = 43.1 bits (100), Expect = 0.055
Identities = 26/101 (25%), Positives = 39/101 (37%), Gaps = 35/101 (34%)
Frame = +1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLS-------------------------TGQSAMVCR 84
+Q CR+++ G+C +GD C + H T + C
Sbjct: 184 RQTVCRHWLRGLCMKGDACGFLHQFDKARMPICRFFRLYGECREQDCVYKHTNEDIKECN 363
Query: 85 YYQRGCCAYGDHCRYEHTK-----PLMQE-----EELTTVN 115
Y+ G C G CRY H K P ++E ++LTT N
Sbjct: 364 MYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTTYN 486
>gb|AC000103.2|AC000103 Genomic sequence for Arabidopsis thaliana BAC F21J9 from chromosome I,
complete sequence
Length = 99392
Score = 42.7 bits (99), Expect = 0.072
Identities = 22/77 (28%), Positives = 34/77 (43%)
Frame = +2
Query: 262 AVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSC 321
++ ++ CGIC+E + +L NC H C+KC R W + + SC
Sbjct: 24284 SIDLEREDECGICLEPCTKM---------VLPNCCHAMCIKCYRNWNTKSE-------SC 24415
Query: 322 PECRITSNFVIPSEYWV 338
P CR + V + WV
Sbjct: 24416 PFCRGSIKRVNSEDLWV 24466
>ref|NM_102289.1| expressed protein
Length = 1179
Score = 42.7 bits (99), Expect = 0.072
Identities = 22/77 (28%), Positives = 34/77 (43%)
Frame = +3
Query: 262 AVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSC 321
++ ++ CGIC+E + +L NC H C+KC R W + + SC
Sbjct: 702 SIDLEREDECGICLEPCTKM---------VLPNCCHAMCIKCYRNWNTKSE-------SC 833
Query: 322 PECRITSNFVIPSEYWV 338
P CR + V + WV
Sbjct: 834 PFCRGSIKRVNSEDLWV 884
>ref|NM_114703.1| putative protein
Length = 1347
Score = 42.4 bits (98), Expect = 0.093
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 20/71 (28%)
Frame = +1
Query: 54 CRYFMH-GVCKEGDNCRYSHDLST-----------------GQSAMV-CRYYQR-GCCAY 93
C ++M G CK G +C+++H L+ G+ ++ C+YY R G C Y
Sbjct: 346 CSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGLIDCKYYFRTGGCKY 525
Query: 94 GDHCRYEHTKP 104
G+ CR+ HT P
Sbjct: 526 GETCRFNHTIP 558
Score = 41.6 bits (96), Expect = 0.16
Identities = 21/71 (29%), Positives = 30/71 (41%), Gaps = 18/71 (25%)
Frame = +1
Query: 52 VTCRYFMH-GVCKEGDNCRYSHDLSTGQSAMV----------------CRYYQR-GCCAY 93
+ C+Y+ G CK G+ CR++H + A C YY R G C Y
Sbjct: 484 IDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKY 663
Query: 94 GDHCRYEHTKP 104
G C++ H P
Sbjct: 664 GAECKFNHPDP 696
Score = 38.5 bits (88), Expect = 1.3
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 20/86 (23%)
Frame = +1
Query: 51 QVTCRYFMH-GVCKEGDNCRYSHD----------------LSTGQSAMVCRYYQR-GCCA 92
Q C Y+M G CK NC+Y H L +C YY R G C
Sbjct: 1045 QPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYYSRYGICK 1224
Query: 93 YGDHCRYEHT--KPLMQEEELTTVNP 116
+G CR++H+ P E V P
Sbjct: 1225 FGPACRFDHSVQPPYSTESSQAIVEP 1302
>emb|Z68297.1|CEF11A10 Caenorhabditis elegans cosmid F11A10, complete sequence
Length = 19620
Score = 42.0 bits (97), Expect = 0.12
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 27/81 (33%)
Frame = -2
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHD---------------------------LSTGQSAMV 82
K V C++++ G+CK+GD C + H+ +
Sbjct: 12608 KAVVCKHWLRGLCKKGDQCEFLHEYDLTKMPECFFFSKYSACSNRECPFRHIDPETKMKD 12429
Query: 83 CRYYQRGCCAYGDHCRYEHTK 103
C +Y RG C +G +C++ H +
Sbjct: 12428 CPWYDRGFCRHGPYCKHRHRR 12366
Score = 41.6 bits (96), Expect = 0.16
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = -2
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQE 108
TK C ++ G C+ G C++ H + VC Y G C G C+Y H +
Sbjct: 12443 TKMKDCPWYDRGFCRHGPYCKHRH-----RRRAVCPNYLAGFCLQGPDCQYAHPSFGLPS 12279
Query: 109 EELTTVNPAAKTY 121
E V+ A TY
Sbjct: 12278 FENIAVSHAKPTY 12240
Score = 38.9 bits (89), Expect = 1.0
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -2
Query: 51 QVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQEEE 110
+ CR +C G C H G+ A+VC+++ RG C GD C + H L + E
Sbjct: 12686 KAVCRKNKLKMCPFGPTCPLRH--IDGEKAVVCKHWLRGLCKKGDQCEFLHEYDLTKMPE 12513
>ref|NM_069892.1| Zinc finger, C3HC4 type (RING finger)
Length = 2331
Score = 42.0 bits (97), Expect = 0.12
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 27/81 (33%)
Frame = +1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHD---------------------------LSTGQSAMV 82
K V C++++ G+CK+GD C + H+ +
Sbjct: 232 KAVVCKHWLRGLCKKGDQCEFLHEYDLTKMPECFFFSKYSACSNRECPFRHIDPETKMKD 411
Query: 83 CRYYQRGCCAYGDHCRYEHTK 103
C +Y RG C +G +C++ H +
Sbjct: 412 CPWYDRGFCRHGPYCKHRHRR 474
Score = 41.6 bits (96), Expect = 0.16
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = +1
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQE 108
TK C ++ G C+ G C++ H + VC Y G C G C+Y H +
Sbjct: 397 TKMKDCPWYDRGFCRHGPYCKHRH-----RRRAVCPNYLAGFCLQGPDCQYAHPSFGLPS 561
Query: 109 EELTTVNPAAKTY 121
E V+ A TY
Sbjct: 562 FENIAVSHAKPTY 600
Score = 38.9 bits (89), Expect = 1.0
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +1
Query: 51 QVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQEEE 110
+ CR +C G C H G+ A+VC+++ RG C GD C + H L + E
Sbjct: 154 KAVCRKNKLKMCPFGPTCPLRH--IDGEKAVVCKHWLRGLCKKGDQCEFLHEYDLTKMPE 327
>gb|AC008755.7| Homo sapiens chromosome 19 clone CTD-3026N16, complete sequence
Length = 203912
Score = 41.6 bits (96), Expect = 0.16
Identities = 14/37 (37%), Positives = 23/37 (61%)
Frame = +2
Query: 65 GDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
GD+C +SHD+ + +C++Y G CA ++C Y H
Sbjct: 94787 GDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMH 94897
>ref|NM_121860.1| zinc finger -like protein
Length = 1371
Score = 41.6 bits (96), Expect = 0.16
Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 26/99 (26%)
Frame = +1
Query: 51 QVTCRYFMH-GVCKEGDNCRYSHDLSTGQSAMV------------------CRYYQR-GC 90
Q C++FM G CK G +C+Y H G V C Y+ R G
Sbjct: 271 QPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQ 450
Query: 91 CAYGDHCRYEH------TKPLMQEEELTTVNPAAKTYPS 123
C +G CRY H P Q+++ + P YPS
Sbjct: 451 CKFGSTCRYHHPVPPGVQAPSQQQQQQLSAGPT--MYPS 561
Score = 40.0 bits (92), Expect = 0.46
Identities = 28/102 (27%), Positives = 45/102 (43%), Gaps = 23/102 (22%)
Frame = +1
Query: 50 KQVTCRYFMH-GVCKEGDNCRYSHDLSTGQ---------------SAMVCRYY-QRGCCA 92
+Q C+YFM G CK G +CR+ H + A+ C ++ Q G C
Sbjct: 877 EQPECQYFMRTGDCKFGTSCRFHHPMEAASPEASTLSHIGLPLRPGAVPCTHFAQHGICK 1056
Query: 93 YGDHCRYEHTKPLMQEEELTTVNPAAKT------YPSDLALL 128
+G C+++H+ L + +P++ T YPS L L
Sbjct: 1057FGPACKFDHS--LGSSSLSYSPSPSSLTDMPVAPYPSSLGTL 1176
>gb|U46674.1|CELT26A8 Caenorhabditis elegans cosmid T26A8
Length = 23113
Score = 41.6 bits (96), Expect = 0.16
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTG-QSAMVCRYYQRGCC 91
T+ C++F G C++GDNC YSH + ++C +Y C
Sbjct: 12124 TEHQICKFFREGYCRDGDNCLYSHQAEDSLRRPVLCNFYANSFC 11993
>ref|NM_117163.1| putative RING finger protein
Length = 579
Score = 41.6 bits (96), Expect = 0.16
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECR 325
CGICM+++ ++ G+L C H +C +CI W S I+ CP C+
Sbjct: 91 CGICMDIIIDR--------GVLDCCQHWFCFECIDNW-------STIMNLCPLCQ 210
>emb|AL133156.1|SPAC227 S.pombe chromosome I cosmid c227
Length = 32799
Score = 41.2 bits (95), Expect = 0.21
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -2
Query: 58 MHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQ 107
+ G+CK+G+ C + H+ + + Y +RG C+ G+ C Y H P Q
Sbjct: 11651 LRGLCKKGEQCDFLHEYNLKKMPPCHFYAERGWCSNGEECLYLHLDPSKQ 11502
>ref|NM_125721.1| putative protein
Length = 1308
Score = 41.2 bits (95), Expect = 0.21
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 18/73 (24%)
Frame = +1
Query: 50 KQVTCRYFMH-GVCKEGDNCRYSHDLSTGQSAMV----------------CRYYQR-GCC 91
K + C+Y+ G CK G++CR+SH A V C +Y R G C
Sbjct: 448 KLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRNGSC 627
Query: 92 AYGDHCRYEHTKP 104
+G C++ H P
Sbjct: 628 KFGSDCKFNHPDP 666
Score = 40.8 bits (94), Expect = 0.27
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 19/69 (27%)
Frame = +1
Query: 54 CRYFMH-GVCKEGDNCRYSHD----LSTGQSA-------------MVCRYYQR-GCCAYG 94
C ++M G CK G +C+++H L G+ M C+YY R G C YG
Sbjct: 319 CSFYMRTGSCKYGSSCKFNHPVRRKLQIGRERVRERDEDVENPKLMECKYYFRTGGCKYG 498
Query: 95 DHCRYEHTK 103
+ CR+ H K
Sbjct: 499 ESCRFSHMK 525
>gb|AC092645.2| Homo sapiens chromosome 2 clone RP11-399B17, complete sequence
Length = 147390
Score = 40.8 bits (94), Expect = 0.27
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -2
Query: 65 GDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
GD C++ HD + +C++Y +G C G++C Y H
Sbjct: 124829 GDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLH 124719
>gb|AY048253.1| Arabidopsis thaliana At1g04990/F13M7_1 mRNA, complete cds
Length = 1679
Score = 40.4 bits (93), Expect = 0.35
Identities = 24/71 (33%), Positives = 31/71 (42%), Gaps = 17/71 (23%)
Frame = +1
Query: 51 QVTCRYFMH-GVCKEGDNCRYSH--DLSTGQSAMV-------------CRYYQR-GCCAY 93
Q C YF+ G CK G C+Y H D + Q M C YY R G C +
Sbjct: 463 QPDCEYFLKTGACKYGPTCKYHHPKDRNGAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRF 642
Query: 94 GDHCRYEHTKP 104
G C++ H +P
Sbjct: 643 GVACKFHHPQP 675
Score = 39.7 bits (91), Expect = 0.61
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 18/80 (22%)
Frame = +1
Query: 51 QVTCRYFMH-GVCKEGDNCRYSHD----------------LSTGQSAMVC-RYYQRGCCA 92
Q CR+FM+ G CK GD+C+YSH L C + G C
Sbjct: 976 QPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCK 1155
Query: 93 YGDHCRYEHTKPLMQEEELT 112
+G +C+++H P++ LT
Sbjct: 1156 FGPNCKFDH--PMLPYPGLT 1209
Score = 38.9 bits (89), Expect = 1.0
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 15/65 (23%)
Frame = +1
Query: 54 CRYFMH-GVCKEGDNCRYSHDLSTGQSAMV-------------CRYYQR-GCCAYGDHCR 98
C++++ G+C G +CRY+H Q C Y+ + G C YG C+
Sbjct: 343 CQFYLRTGLCGYGSSCRYNHPTHLPQDVAYYKEELPERIGQPDCEYFLKTGACKYGPTCK 522
Query: 99 YEHTK 103
Y H K
Sbjct: 523 YHHPK 537
>gb|U20660.1|DVU20660 Drosophila virilis suppressor of sable homolog gene, complete cds
Length = 8527
Score = 40.4 bits (93), Expect = 0.35
Identities = 17/56 (30%), Positives = 27/56 (47%), Gaps = 1/56 (1%)
Frame = +3
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGC-CAYGDHCRYEHTKPLMQE 108
C++++ C + D C Y H C+YY G C GD C + H +PL ++
Sbjct: 3024 CKFYLKDCCAKRDKCSYMH------KEFPCKYYYLGMDCYAGDDCLFHHGEPLTEQ 3173
>gb|AC009917.2|F26G16 Arabidopsis thaliana chromosome 1 BAC F26G16 sequence, complete
sequence
Length = 75799
Score = 40.4 bits (93), Expect = 0.35
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQ-RGCCAYGDHCRYEHTKPLMQE 108
+Q CR+++ G+C +GD C + H + +CR+++ G C D C Y+HT ++E
Sbjct: 25990 RQTVCRHWLRGLCMKGDACGFLHQFDKARMP-ICRFFRLYGECREQD-CVYKHTNEDIKE 25817
>ref|NM_100378.1| zinc finger protein 2, putative
Length = 1677
Score = 40.4 bits (93), Expect = 0.35
Identities = 24/71 (33%), Positives = 31/71 (42%), Gaps = 17/71 (23%)
Frame = +1
Query: 51 QVTCRYFMH-GVCKEGDNCRYSH--DLSTGQSAMV-------------CRYYQR-GCCAY 93
Q C YF+ G CK G C+Y H D + Q M C YY R G C +
Sbjct: 463 QPDCEYFLKTGACKYGPTCKYHHPKDRNGAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRF 642
Query: 94 GDHCRYEHTKP 104
G C++ H +P
Sbjct: 643 GVACKFHHPQP 675
Score = 39.7 bits (91), Expect = 0.61
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 18/80 (22%)
Frame = +1
Query: 51 QVTCRYFMH-GVCKEGDNCRYSHD----------------LSTGQSAMVC-RYYQRGCCA 92
Q CR+FM+ G CK GD+C+YSH L C + G C
Sbjct: 976 QPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCK 1155
Query: 93 YGDHCRYEHTKPLMQEEELT 112
+G +C+++H P++ LT
Sbjct: 1156 FGPNCKFDH--PMLPYPGLT 1209
Score = 38.9 bits (89), Expect = 1.0
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 15/65 (23%)
Frame = +1
Query: 54 CRYFMH-GVCKEGDNCRYSHDLSTGQSAMV-------------CRYYQR-GCCAYGDHCR 98
C++++ G+C G +CRY+H Q C Y+ + G C YG C+
Sbjct: 343 CQFYLRTGLCGYGSSCRYNHPTHLPQDVAYYKEELPERIGQPDCEYFLKTGACKYGPTCK 522
Query: 99 YEHTK 103
Y H K
Sbjct: 523 YHHPK 537
>gb|AC007085.7|AC007085 Drosophila melanogaster, chromosome 2R, region 44D2-44E1, BAC clone
BACR21H10, complete sequence
Length = 166867
Score = 40.0 bits (92), Expect = 0.46
Identities = 14/26 (53%), Positives = 18/26 (68%)
Frame = -3
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLS 75
K V C +F G C +GD C++SHDLS
Sbjct: 73541 KSVVCAFFKQGTCTKGDKCKFSHDLS 73464
>gb|BC016190.1|BC016190 Mus musculus, Similar to RIKEN cDNA 1500000C01 gene, clone
MGC:27563 IMAGE:4483305, mRNA, complete cds
Length = 1240
Score = 40.0 bits (92), Expect = 0.46
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
+ C +F G+C +G C H+ G+ +VC+++ RG C D C + H
Sbjct: 137 SSSAVCNFFAKGLCVKGMLCPLRHE--QGEKLVVCKHWLRGLCRKSDCCDFLH 289
Score = 37.4 bits (85), Expect = 3.0
Identities = 15/66 (22%), Positives = 33/66 (49%)
Frame = +2
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQEE 109
K V C++++ G+C++ D C + H + VC ++ + C + H KP+++ +
Sbjct: 221 KLVVCKHWLRGLCRKSDCCDFLHQYDVSKMP-VCYFHSKFGNCSNKECLFLHLKPVLKLQ 397
Query: 110 ELTTVN 115
+ N
Sbjct: 398 DCPWYN 415
>emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome 3, BAC clone F13I12
Length = 140680
Score = 40.0 bits (92), Expect = 0.46
Identities = 24/84 (28%), Positives = 33/84 (38%), Gaps = 16/84 (19%)
Frame = -1
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKII------------ 318
CGICME+ +L NC H+ C+KC R W +II
Sbjct: 78034 CGICMEM---------NNMVVLPNCTHSLCIKCYRDW*VISALFFRIISMNQ**PMISCR 77882
Query: 319 ----KSCPECRITSNFVIPSEYWV 338
+SCP CR + V + W+
Sbjct: 77881 HGRSESCPFCRDSLKRVNSGDLWM 77810
>ref|XM_080734.1| CG8635, mRNA
Length = 1556
Score = 40.0 bits (92), Expect = 0.46
Identities = 14/26 (53%), Positives = 18/26 (68%)
Frame = +1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLS 75
K V C +F G C +GD C++SHDLS
Sbjct: 544 KSVVCAFFKQGTCTKGDKCKFSHDLS 621
>ref|NM_130352.1| unknown protein
Length = 1819
Score = 40.0 bits (92), Expect = 0.46
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 22/99 (22%)
Frame = +1
Query: 54 CRYFMH-GVCKEGDNCRYSHDLSTGQSAM----------------VCRYY-QRGCCAYGD 95
C++++ G CK G +C++ H + G S C YY + G C +G
Sbjct: 508 CQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNECSYYLKTGQCKFGI 687
Query: 96 HCRYEHTKPLMQEEELTTVNP----AAKTYPSDLALLPE 130
C++ H +P TTV P A + YPS +L+P+
Sbjct: 688 TCKFHHPQPAG-----TTVPPPPASAPQFYPSVQSLMPD 789
Score = 38.5 bits (88), Expect = 1.3
Identities = 22/67 (32%), Positives = 32/67 (46%), Gaps = 17/67 (25%)
Frame = +1
Query: 54 CRYFMH-GVCKEGDNCRYSHD----------LSTGQ-----SAMVCRYY-QRGCCAYGDH 96
C Y+M GVC G+ CRY+H +TGQ C++Y + G C +G
Sbjct: 373 CAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGAS 552
Query: 97 CRYEHTK 103
C++ H K
Sbjct: 553 CKFHHPK 573
>ref|NM_058865.1| zinc finger protein
Length = 2385
Score = 40.0 bits (92), Expect = 0.46
Identities = 21/64 (32%), Positives = 31/64 (47%)
Frame = +1
Query: 267 KDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRI 326
K + CGIC Y+ N +R + C HT CL+CI+K + + F CP CR
Sbjct: 334 KGLSCGIC----YDPFNTGKRIPKVFP-CGHTICLQCIKKLLNTRTFLGGNTVICPSCRQ 498
Query: 327 TSNF 330
+ +
Sbjct: 499 NTRY 510
>gb|AY060945.1| Drosophila melanogaster GM08440 full length cDNA
Length = 1402
Score = 40.0 bits (92), Expect = 0.46
Identities = 14/26 (53%), Positives = 18/26 (68%)
Frame = +1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLS 75
K V C +F G C +GD C++SHDLS
Sbjct: 367 KSVVCAFFKQGTCTKGDKCKFSHDLS 444
>ref|NM_120673.1| unknown protein
Length = 456
Score = 40.0 bits (92), Expect = 0.46
Identities = 19/60 (31%), Positives = 29/60 (47%)
Frame = +1
Query: 268 DMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRIT 327
++ C IC+E + + N ++ LS CNH++ + CI W Q CP CR T
Sbjct: 265 ELCCPICLEDLKKVDNDDDKVVVCLSKCNHSFHMNCIFSWLRESQ-------DCPICRST 423
>dbj|AB017060.1|AB017060 Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18J17
Length = 54252
Score = 40.0 bits (92), Expect = 0.46
Identities = 19/60 (31%), Positives = 29/60 (47%)
Frame = +2
Query: 268 DMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRIT 327
++ C IC+E + + N ++ LS CNH++ + CI W Q CP CR T
Sbjct: 10010 ELCCPICLEDLKKVDNDDDKVVVCLSKCNHSFHMNCIFSWLRESQ-------DCPICRST 10168
>gb|AE003836.2|AE003836 Drosophila melanogaster genomic scaffold 142000013386047 section 7 of
52, complete sequence
Length = 253273
Score = 40.0 bits (92), Expect = 0.46
Identities = 14/26 (53%), Positives = 18/26 (68%)
Frame = -1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLS 75
K V C +F G C +GD C++SHDLS
Sbjct: 88117 KSVVCAFFKQGTCTKGDKCKFSHDLS 88040
>gb|AF277169.1|AF277164S6 Homo sapiens Makorin RING zinc-finger protein 2 (MKRN2) gene, exon
6
Length = 1123
Score = 40.0 bits (92), Expect = 0.46
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2
Query: 319 KSCPECRITSNFVIPSEYWV 338
+SCPECR+ S FVIPS YWV
Sbjct: 644 RSCPECRVISEFVIPSVYWV 703
>dbj|AK005072.1|AK005072 Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched
library, clone:1500000C01:homolog to ZINC FINGER PROTEIN
(FRAGMENT), full insert sequence
Length = 1235
Score = 40.0 bits (92), Expect = 0.46
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 49 TKQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
+ C +F G+C +G C H+ G+ +VC+++ RG C D C + H
Sbjct: 199 SSSAVCNFFAKGLCVKGMLCPLRHE--QGEKLVVCKHWLRGLCRKSDCCDFLH 351
Score = 37.4 bits (85), Expect = 3.0
Identities = 15/66 (22%), Positives = 33/66 (49%)
Frame = +1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQEE 109
K V C++++ G+C++ D C + H + VC ++ + C + H KP+++ +
Sbjct: 283 KLVVCKHWLRGLCRKSDCCDFLHQYDVSKMP-VCYFHSKFGNCSNKECLFLHLKPVLKLQ 459
Query: 110 ELTTVN 115
+ N
Sbjct: 460 DCPWYN 477
>ref|NM_128853.1| expressed protein
Length = 1362
Score = 39.7 bits (91), Expect = 0.61
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 14/64 (21%)
Frame = +1
Query: 54 CRYFMH-GVCKEGDNCRYSHDLSTGQSAMVCRYY-------------QRGCCAYGDHCRY 99
C++F+ G C G++CRY+H L+ ++ YY + G C YG C+Y
Sbjct: 148 CQFFLRTGQCGYGNSCRYNHPLTNLPQGII--YYRDQLPERVGQPDCETGACKYGPTCKY 321
Query: 100 EHTK 103
H K
Sbjct: 322 HHPK 333
Score = 39.7 bits (91), Expect = 0.61
Identities = 20/73 (27%), Positives = 36/73 (48%), Gaps = 18/73 (24%)
Frame = +1
Query: 48 WTKQVTCRYFMH-GVCKEGDNCRYSHD----------------LSTGQSAMVCRYYQR-G 89
++++ CR+FM+ G CK GD+C+YSH L C ++ G
Sbjct: 781 FSERAECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPIVLPARPGQPACGNFKAYG 960
Query: 90 CCAYGDHCRYEHT 102
C +G +C+++H+
Sbjct: 961 FCKFGANCKFDHS 999
Score = 36.6 bits (83), Expect = 5.1
Identities = 18/47 (38%), Positives = 25/47 (52%), Gaps = 1/47 (2%)
Frame = +1
Query: 71 SHDLSTGQSAMVCRYYQR-GCCAYGDHCRYEHTKPLMQEEELTTVNP 116
SH S + A CR++ G C YGD C+Y H K + + T +NP
Sbjct: 766 SHHHSFSERAE-CRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNP 903
>gb|AF138744.1|AF138744 Arabidopsis thaliana zinc finger protein 2 (zfn2) mRNA, complete
cds
Length = 1362
Score = 39.7 bits (91), Expect = 0.61
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 14/64 (21%)
Frame = +1
Query: 54 CRYFMH-GVCKEGDNCRYSHDLSTGQSAMVCRYY-------------QRGCCAYGDHCRY 99
C++F+ G C G++CRY+H L+ ++ YY + G C YG C+Y
Sbjct: 148 CQFFLRTGQCGYGNSCRYNHPLTNLPQGII--YYRDQLPERVGQPDCETGACKYGPTCKY 321
Query: 100 EHTK 103
H K
Sbjct: 322 HHPK 333
Score = 39.7 bits (91), Expect = 0.61
Identities = 20/73 (27%), Positives = 36/73 (48%), Gaps = 18/73 (24%)
Frame = +1
Query: 48 WTKQVTCRYFMH-GVCKEGDNCRYSHD----------------LSTGQSAMVCRYYQR-G 89
++++ CR+FM+ G CK GD+C+YSH L C ++ G
Sbjct: 781 FSERAECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPIVLPARPGQPACGNFKAYG 960
Query: 90 CCAYGDHCRYEHT 102
C +G +C+++H+
Sbjct: 961 FCKFGANCKFDHS 999
Score = 36.6 bits (83), Expect = 5.1
Identities = 18/47 (38%), Positives = 25/47 (52%), Gaps = 1/47 (2%)
Frame = +1
Query: 71 SHDLSTGQSAMVCRYYQR-GCCAYGDHCRYEHTKPLMQEEELTTVNP 116
SH S + A CR++ G C YGD C+Y H K + + T +NP
Sbjct: 766 SHHHSFSERAE-CRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNP 903
>gb|AF457920.1|AF457920 Paxillus involutus genomic sequence
Length = 32940
Score = 39.7 bits (91), Expect = 0.61
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 53 TCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYY 86
TCRY+ G C+ GDNC++SH VCR+Y
Sbjct: 31646 TCRYWKSGTCRRGDNCQFSH------GHEVCRWY 31729
Score = 39.7 bits (91), Expect = 0.61
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 53 TCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYY 86
TCRY+ G C+ GDNC++SH VCR+Y
Sbjct: 17312 TCRYWKSGTCRRGDNCQFSH------GHEVCRWY 17395
>gb|AF462812.1|AF462812 Arabidopsis thaliana AT5g19430/F7K24_180 mRNA sequence
Length = 1234
Score = 39.7 bits (91), Expect = 0.61
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNF 330
C IC++ + + ++ C H YC+ CI +W S K+ +CP+C++ +F
Sbjct: 433 CAICLDTI------PLQETAMVKGCEHAYCVTCILRWASYKE-----KPTCPQCKLPFDF 579
Query: 331 V 331
+
Sbjct: 580 L 582
>ref|NM_111516.1| hypothetical protein
Length = 1314
Score = 39.7 bits (91), Expect = 0.61
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 20/72 (27%)
Frame = +1
Query: 54 CRYFMH-GVCKEGDNCRYSHDLSTGQSAMV------------------CRYYQR-GCCAY 93
C++FM G CK G +C+Y H G V C YY R G C +
Sbjct: 241 CQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKF 420
Query: 94 GDHCRYEHTKPL 105
G CR+ H PL
Sbjct: 421 GLTCRFNHPVPL 456
Score = 38.1 bits (87), Expect = 1.8
Identities = 22/70 (31%), Positives = 31/70 (43%), Gaps = 18/70 (25%)
Frame = +1
Query: 51 QVTCRYFMH-GVCKEGDNCRYSHDLS-----TG------------QSAMVCRYYQRGCCA 92
Q C+YFM G CK G +CRY H + TG A + Q G C
Sbjct: 853 QPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICK 1032
Query: 93 YGDHCRYEHT 102
+G C+++H+
Sbjct: 1033FGPACKFDHS 1062
Score = 36.2 bits (82), Expect = 6.7
Identities = 19/68 (27%), Positives = 29/68 (41%), Gaps = 18/68 (26%)
Frame = +1
Query: 54 CRYFMH-GVCKEGDNCRYSHDLSTG----------------QSAMVCRYYQR-GCCAYGD 95
C Y++ GVC G CR++H G VC+++ R G C +G
Sbjct: 103 CIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFMRTGTCKFGA 282
Query: 96 HCRYEHTK 103
C+Y H +
Sbjct: 283 SCKYHHPR 306
>ref|NM_121269.1| RING finger-like protein
Length = 765
Score = 39.7 bits (91), Expect = 0.61
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNF 330
C IC++ + + ++ C H YC+ CI +W S K+ +CP+C++ +F
Sbjct: 127 CAICLDTI------PLQETAMVKGCEHAYCVTCILRWASYKE-----KPTCPQCKLPFDF 273
Query: 331 V 331
+
Sbjct: 274 L 276
>gb|AF265664.1|AF265664 Solanum tuberosum resistance gene cluster, complete sequence
Length = 187352
Score = 39.3 bits (90), Expect = 0.79
Identities = 21/69 (30%), Positives = 34/69 (48%), Gaps = 6/69 (8%)
Frame = -2
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKS----CPECR- 325
C IC++VV++ +++ C H YC CI KW K S+ I + CP C+
Sbjct: 179236 CNICLDVVHDP---------VVTLCGHLYCWPCIYKWIHFKTISSENIDNQQPKCPVCKA 179084
Query: 326 -ITSNFVIP 333
++ +IP
Sbjct: 179083 EVSQKTLIP 179057
Score = 39.3 bits (90), Expect = 0.79
Identities = 21/69 (30%), Positives = 34/69 (48%), Gaps = 6/69 (8%)
Frame = -2
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKII----KSCPECR- 325
C IC++VV++ +++ C H YC CI KW K S+ I +CP C+
Sbjct: 66586 CNICLDVVHDP---------VVTLCGHLYCWPCIYKWIHFKTISSENIDNQQPNCPVCKA 66434
Query: 326 -ITSNFVIP 333
++ +IP
Sbjct: 66433 EVSQKTLIP 66407
Score = 38.5 bits (88), Expect = 1.3
Identities = 20/69 (28%), Positives = 34/69 (48%), Gaps = 6/69 (8%)
Frame = -2
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKS----CPECR- 325
C IC+++V++ +++ C H YC CI KW K S+ I + CP C+
Sbjct: 109123 CNICLDLVHDP---------VVTLCGHLYCWPCIYKWIHFKTISSENINNQQPKCPVCKA 108971
Query: 326 -ITSNFVIP 333
++ +IP
Sbjct: 108970 EVSQKTLIP 108944
Score = 38.5 bits (88), Expect = 1.3
Identities = 20/69 (28%), Positives = 34/69 (48%), Gaps = 6/69 (8%)
Frame = -1
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKS----CPECR- 325
C IC+++V++ +++ C H YC CI KW K S+ I + CP C+
Sbjct: 39164 CNICLDLVHDP---------VVTLCGHLYCWPCIYKWIHIKTISSENIDNQQPKCPVCKA 39012
Query: 326 -ITSNFVIP 333
++ +IP
Sbjct: 39011 EVSQKTLIP 38985
Score = 36.2 bits (82), Expect = 6.7
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Frame = -2
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKS----CPECR- 325
C IC+++V++ +++ C H YC CI KW K + I + CP C+
Sbjct: 145282 CNICLDLVHDP---------VVTLCGHLYCWPCIYKWIHFKTISLESIDNQQPKCPVCKA 145130
Query: 326 -ITSNFVIP 333
++ +IP
Sbjct: 145129 EVSQKTLIP 145103
>ref|NG_000598.1| Drosophila melanogaster Death related ced-3/Nedd2-like protein
(Dredd) on chromosome 1
Length = 11778
Score = 39.3 bits (90), Expect = 0.79
Identities = 17/56 (30%), Positives = 27/56 (47%), Gaps = 1/56 (1%)
Frame = -1
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGC-CAYGDHCRYEHTKPLMQE 108
C++++ C + D C Y H C+YY G C GD C + H +PL ++
Sbjct: 273 CKFYLMDCCAKRDKCSYMH------KEFPCKYYYLGMDCYAGDDCLFYHGEPLSEQ 124
>gb|AY071563.1| Drosophila melanogaster RE63043 full length cDNA
Length = 4908
Score = 39.3 bits (90), Expect = 0.79
Identities = 17/56 (30%), Positives = 27/56 (47%), Gaps = 1/56 (1%)
Frame = +2
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGC-CAYGDHCRYEHTKPLMQE 108
C++++ C + D C Y H C+YY G C GD C + H +PL ++
Sbjct: 1502 CKFYLMDCCAKRDKCSYMH------KEFPCKYYYLGMDCYAGDDCLFYHGEPLSEQ 1651
>gb|AF361602.1| Arabidopsis thaliana AT5g19430/F7K24_180 mRNA, complete cds
Length = 1157
Score = 39.3 bits (90), Expect = 0.79
Identities = 17/61 (27%), Positives = 30/61 (48%)
Frame = +3
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNF 330
C IC+ + + ++ C HTYC+ CI +W S K+ +CP+C+ +F
Sbjct: 309 CAICLSEI------PLQETAMVKGCEHTYCVTCILRWASCKE-----SPTCPQCKHPFDF 455
Query: 331 V 331
+
Sbjct: 456 L 458
>ref|NM_121948.1| putative protein
Length = 1156
Score = 39.3 bits (90), Expect = 0.79
Identities = 17/61 (27%), Positives = 30/61 (48%)
Frame = +3
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNF 330
C IC+ + + ++ C HTYC+ CI +W S K+ +CP+C+ +F
Sbjct: 309 CAICLSEI------PLQETAMVKGCEHTYCVTCILRWASCKE-----SPTCPQCKHPFDF 455
Query: 331 V 331
+
Sbjct: 456 L 458
>emb|AL031581.1|DMC115C2 Drosophila melanogaster cosmid clone 115C2
Length = 46630
Score = 39.3 bits (90), Expect = 0.79
Identities = 17/56 (30%), Positives = 27/56 (47%), Gaps = 1/56 (1%)
Frame = +3
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGC-CAYGDHCRYEHTKPLMQE 108
C++++ C + D C Y H C+YY G C GD C + H +PL ++
Sbjct: 18330 CKFYLMDCCAKRDKCSYMH------KEFPCKYYYLGMDCYAGDDCLFYHGEPLSEQ 18479
>ref|NG_000180.1| Drosophila melanogaster suppressor of sable (su(s)) on chromosome 1
Length = 25000
Score = 39.3 bits (90), Expect = 0.79
Identities = 17/56 (30%), Positives = 27/56 (47%), Gaps = 1/56 (1%)
Frame = +3
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGC-CAYGDHCRYEHTKPLMQE 108
C++++ C + D C Y H C+YY G C GD C + H +PL ++
Sbjct: 18330 CKFYLMDCCAKRDKCSYMH------KEFPCKYYYLGMDCYAGDDCLFYHGEPLSEQ 18479
>ref|NM_057406.1| Drosophila melanogaster suppressor of sable (su(s)), transcript
variant su3s4-P1-CDS, mRNA
Length = 3978
Score = 39.3 bits (90), Expect = 0.79
Identities = 17/56 (30%), Positives = 27/56 (47%), Gaps = 1/56 (1%)
Frame = +1
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGC-CAYGDHCRYEHTKPLMQE 108
C++++ C + D C Y H C+YY G C GD C + H +PL ++
Sbjct: 1006 CKFYLMDCCAKRDKCSYMH------KEFPCKYYYLGMDCYAGDDCLFYHGEPLSEQ 1155
>gb|M57889.1|DROSUSG Drosophila melanogaster suppressor of sable gene, complete cds
Length = 8493
Score = 39.3 bits (90), Expect = 0.79
Identities = 17/56 (30%), Positives = 27/56 (47%), Gaps = 1/56 (1%)
Frame = +3
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGC-CAYGDHCRYEHTKPLMQE 108
C++++ C + D C Y H C+YY G C GD C + H +PL ++
Sbjct: 4743 CKFYLMDCCAKRDKCSYMH------KEFPCKYYYLGMDCYAGDDCLFYHGEPLSEQ 4892
>gb|AE003418.1|AE003418 Drosophila melanogaster genomic scaffold 142000013386054 section 2 of
35, complete sequence
Length = 299970
Score = 39.3 bits (90), Expect = 0.79
Identities = 17/56 (30%), Positives = 27/56 (47%), Gaps = 1/56 (1%)
Frame = +2
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGC-CAYGDHCRYEHTKPLMQE 108
C++++ C + D C Y H C+YY G C GD C + H +PL ++
Sbjct: 89717 CKFYLMDCCAKRDKCSYMH------KEFPCKYYYLGMDCYAGDDCLFYHGEPLSEQ 89866
>emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
Length = 262797
Score = 39.3 bits (90), Expect = 0.79
Identities = 18/53 (33%), Positives = 29/53 (53%), Gaps = 1/53 (1%)
Frame = -2
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLSTGQSAMVCR-YYQRGCCAYGDHCRYEH 101
+ + C++F+ CK GD+C YSHD S C+ ++ +G C D C + H
Sbjct: 212495 RTILCKFFLMNSCKHGDSCTYSHD----TSKFPCKAFHLKGNCTRKD-CPFSH 212352
>gb|AC104602.3| Drosophila melanogaster X BAC RP98-16G6 (Roswell Park Cancer Institute
Drosophila BAC Library) complete sequence
Length = 161668
Score = 39.3 bits (90), Expect = 0.79
Identities = 17/56 (30%), Positives = 27/56 (47%), Gaps = 1/56 (1%)
Frame = +1
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGC-CAYGDHCRYEHTKPLMQE 108
C++++ C + D C Y H C+YY G C GD C + H +PL ++
Sbjct: 125989 CKFYLMDCCAKRDKCSYMH------KEFPCKYYYLGMDCYAGDDCLFYHGEPLSEQ 126138
>gb|AY058228.1| Arabidopsis thaliana AT5g19430/F7K24_180 mRNA, complete cds
Length = 768
Score = 39.3 bits (90), Expect = 0.79
Identities = 17/61 (27%), Positives = 30/61 (48%)
Frame = +1
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNF 330
C IC+ + + ++ C HTYC+ CI +W S K+ +CP+C+ +F
Sbjct: 136 CAICLSEI------PLQETAMVKGCEHTYCVTCILRWASCKE-----SPTCPQCKHPFDF 282
Query: 331 V 331
+
Sbjct: 283 L 285
>ref|NM_023835.1| Mus musculus tripartite motif protein 12 (Trim12), mRNA
Length = 1558
Score = 38.9 bits (89), Expect = 1.0
Identities = 28/117 (23%), Positives = 54/117 (45%), Gaps = 1/117 (0%)
Frame = +1
Query: 215 GENCVYIHGDVCDMCGLQ-VLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGI 273
GE+C + G ++ G++ V+H I A SQ +K+ E ++ C +
Sbjct: 157 GEHCFCL-GT*AEVRGVRTVIHRITATMASQFMKNLKE----------------EVTCPV 285
Query: 274 CMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNF 330
C+ ++ + + ++C HT+C CI + + + + K+ CP CRI+ F
Sbjct: 286 CLNLMVKPVS---------ADCGHTFCQGCITLYFESIKCDKKVF-ICPVCRISYQF 426
>gb|AY070452.1| Arabidopsis thaliana putative protein with C-terminal RING finger
(At2g37150) mRNA, complete cds
Length = 1982
Score = 38.9 bits (89), Expect = 1.0
Identities = 21/62 (33%), Positives = 27/62 (42%)
Frame = +1
Query: 264 QRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPE 323
Q + C IC+E EK G + C H Y +CI+KW S K SCP
Sbjct: 1606 QTEEQRKCAICLEEYKEK-----EELGEVKGCGHDYHGRCIKKWLSMK-------NSCPI 1749
Query: 324 CR 325
C+
Sbjct: 1750 CK 1755
>gb|AF220126.1|AF220126 Mus musculus tripartite motif protein TRIM12 (Trim12) mRNA,
complete cds
Length = 1558
Score = 38.9 bits (89), Expect = 1.0
Identities = 28/117 (23%), Positives = 54/117 (45%), Gaps = 1/117 (0%)
Frame = +1
Query: 215 GENCVYIHGDVCDMCGLQ-VLHPIDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGI 273
GE+C + G ++ G++ V+H I A SQ +K+ E ++ C +
Sbjct: 157 GEHCFCL-GT*AEVRGVRTVIHRITATMASQFMKNLKE----------------EVTCPV 285
Query: 274 CMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNF 330
C+ ++ + + ++C HT+C CI + + + + K+ CP CRI+ F
Sbjct: 286 CLNLMVKPVS---------ADCGHTFCQGCITLYFESIKCDKKVF-ICPVCRISYQF 426
>emb|AL133625.1|HSM801492 Homo sapiens mRNA; cDNA DKFZp434G2222 (from clone DKFZp434G2222);
partial cds
Length = 2447
Score = 38.5 bits (88), Expect = 1.3
Identities = 25/90 (27%), Positives = 40/90 (43%), Gaps = 7/90 (7%)
Frame = +2
Query: 50 KQVTCRYFMHGVCKEGDN-CRYSHDL------STGQSAMVCRYYQRGCCAYGDHCRYEHT 102
K CR F G C G+N CRY+H ++ + +C Y +G C+ + C+Y H
Sbjct: 350 KLEVCREFQRGNCTRGENDCRYAHPTDASMIEASDNTVTICMDYIKGRCS-REKCKYFHP 526
Query: 103 KPLMQEEELTTVNPAAKTYPSDLALLPETV 132
+Q + + S +AL P T+
Sbjct: 527 PAHLQARLKAAHHQMNHSAASAMALQPGTL 616
>ref|NM_018388.1| Homo sapiens hypothetical protein FLJ11316 (FLJ11316), mRNA
Length = 1413
Score = 38.5 bits (88), Expect = 1.3
Identities = 25/90 (27%), Positives = 40/90 (43%), Gaps = 7/90 (7%)
Frame = +3
Query: 50 KQVTCRYFMHGVCKEGDN-CRYSHDL------STGQSAMVCRYYQRGCCAYGDHCRYEHT 102
K CR F G C G+N CRY+H ++ + +C Y +G C+ + C+Y H
Sbjct: 411 KLEVCREFQRGNCTRGENDCRYAHPTDASMIEASDNTVTICMDYIKGRCS-REKCKYFHP 587
Query: 103 KPLMQEEELTTVNPAAKTYPSDLALLPETV 132
+Q + + S +AL P T+
Sbjct: 588 PAHLQARLKAAHHQMNHSAASAMALQPGTL 677
>dbj|AK002178.1|AK002178 Homo sapiens cDNA FLJ11316 fis, clone PLACE1010202
Length = 1413
Score = 38.5 bits (88), Expect = 1.3
Identities = 25/90 (27%), Positives = 40/90 (43%), Gaps = 7/90 (7%)
Frame = +3
Query: 50 KQVTCRYFMHGVCKEGDN-CRYSHDL------STGQSAMVCRYYQRGCCAYGDHCRYEHT 102
K CR F G C G+N CRY+H ++ + +C Y +G C+ + C+Y H
Sbjct: 411 KLEVCREFQRGNCTRGENDCRYAHPTDASMIEASDNTVTICMDYIKGRCS-REKCKYFHP 587
Query: 103 KPLMQEEELTTVNPAAKTYPSDLALLPETV 132
+Q + + S +AL P T+
Sbjct: 588 PAHLQARLKAAHHQMNHSAASAMALQPGTL 677
>dbj|AB029316.1|AB029316 Homo sapiens mRNA for ring-IBR-ring domain containing protein
Dorfin, complete cds
Length = 4357
Score = 38.1 bits (87), Expect = 1.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 285 SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPEC 324
S+ RF + C+H C+ C+R++ + ES++ SCPEC
Sbjct: 735 SKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPEC 854
>ref|XM_015243.2| Homo sapiens tripartite motif-containing 22 (TRIM22), mRNA
Length = 2272
Score = 38.1 bits (87), Expect = 1.8
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Frame = +1
Query: 242 RSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCL 301
R+ +K+ M+ S V K++ C IC+E++ E + +C H++C
Sbjct: 64 RTSRVKTEGSQGSSAMDFSVKVDIEKEVTCPICLELLTEPLS---------LDCGHSFCQ 216
Query: 302 KCIRKWRSAKQFESKII----KSCPECR 325
CI +AK ES II SCP C+
Sbjct: 217 ACI----TAKIKESVIISRGESSCPVCQ 288
>gb|BC022281.1| Homo sapiens, clone IMAGE:4718024, mRNA
Length = 2838
Score = 38.1 bits (87), Expect = 1.8
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Frame = +1
Query: 242 RSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCL 301
R+ +K+ M+ S V K++ C IC+E++ E + +C H++C
Sbjct: 142 RTSRVKTEGSQGSSAMDFSVKVDIEKEVTCPICLELLTEPLS---------LDCGHSFCQ 294
Query: 302 KCIRKWRSAKQFESKII----KSCPECR 325
CI +AK ES II SCP C+
Sbjct: 295 ACI----TAKIKESVIISRGESSCPVCQ 366
>emb|AL161946.1|ATF7A7 Arabidopsis thaliana DNA chromosome 5, BAC clone F7A7 (ESSA project)
Length = 86690
Score = 38.1 bits (87), Expect = 1.8
Identities = 35/156 (22%), Positives = 57/156 (36%), Gaps = 35/156 (22%)
Frame = +3
Query: 218 CVYIHGDVCDMCGLQVLHP---------IDAAQRSQHIKSCIEAHEK----DMELSFAVQ 264
C ++ + C C VL P D +R Q + C + + K D +
Sbjct: 15489 CFFLTSNGC--CWADVLFPSLLQLHGGITDVEERKQK-EICDKRYRKKDRTDKGKMSEID 15659
Query: 265 RSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKW-----------RSAKQF 313
++ CGIC+E+ R +L CNH+ C+ C R W + F
Sbjct: 15660 LEREEECGICLEI---------RNKVVLPTCNHSMCINCYRNWYIKLFLLFTHSHHSSAF 15812
Query: 314 ESKII-----------KSCPECRITSNFVIPSEYWV 338
++I +SCP CR + V + W+
Sbjct: 15813 FLQVIESLVWNRRARSQSCPFCRGSLKRVNSGDLWI 15920
>gb|BC012336.1|BC012336 Homo sapiens, clone IMAGE:3533528, mRNA
Length = 793
Score = 38.1 bits (87), Expect = 1.8
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLS 75
K V C +F G C +GD C++SHDL+
Sbjct: 408 KSVVCAFFKQGQCTKGDKCKFSHDLT 485
>ref|XM_042050.2| Homo sapiens double ring-finger protein, Dorfin (DORFIN), mRNA
Length = 4312
Score = 38.1 bits (87), Expect = 1.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 285 SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPEC 324
S+ RF + C+H C+ C+R++ + ES++ SCPEC
Sbjct: 717 SKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPEC 836
>gb|AF289586.1|AF289586 Homo sapiens clone pp730 unknown mRNA
Length = 2057
Score = 38.1 bits (87), Expect = 1.8
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLS 75
K V C +F G C +GD C++SHDL+
Sbjct: 426 KSVVCAFFKQGQCTKGDKCKFSHDLT 503
>gb|AF071560.1|AF071560 Mus musculus XYbp protein (XYbp) gene, complete cds
Length = 17906
Score = 38.1 bits (87), Expect = 1.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 285 SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPEC 324
S+ RF + C+H C+ C+R++ + ES++ SCPEC
Sbjct: 629 SKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPEC 748
>ref|NM_013923.1| Mus musculus ring finger protein (C3HC4 type) 19 (Rnf19), mRNA
Length = 4169
Score = 38.1 bits (87), Expect = 1.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 285 SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPEC 324
S+ RF + C+H C+ C+R++ + ES++ SCPEC
Sbjct: 629 SKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPEC 748
>gb|AF120207.1|AF120207 Mus musculus XY body protein (Xybp) mRNA, complete cds
Length = 4169
Score = 38.1 bits (87), Expect = 1.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 285 SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPEC 324
S+ RF + C+H C+ C+R++ + ES++ SCPEC
Sbjct: 629 SKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPEC 748
>gb|AF120206.1|AF120206 Mus musculus XY body protein (Xybp) mRNA, complete cds
Length = 2872
Score = 38.1 bits (87), Expect = 1.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 285 SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPEC 324
S+ RF + C+H C+ C+R++ + ES++ SCPEC
Sbjct: 629 SKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPEC 748
>gb|AF360999.1|AF360999 Mus musculus UbcM4-interacting protein 117 mRNA, partial cds
Length = 479
Score = 38.1 bits (87), Expect = 1.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 285 SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPEC 324
S+ RF + C+H C+ C+R++ + ES++ SCPEC
Sbjct: 162 SKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPEC 281
>ref|NM_006074.2| Homo sapiens tripartite motif-containing 22 (TRIM22), mRNA
Length = 2815
Score = 38.1 bits (87), Expect = 1.8
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Frame = +3
Query: 242 RSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCL 301
R+ +K+ M+ S V K++ C IC+E++ E + +C H++C
Sbjct: 78 RTSRVKTEGSQGSSAMDFSVKVDIEKEVTCPICLELLTEPLS---------LDCGHSFCQ 230
Query: 302 KCIRKWRSAKQFESKII----KSCPECR 325
CI +AK ES II SCP C+
Sbjct: 231 ACI----TAKIKESVIISRGESSCPVCQ 302
>emb|AL360187.1|HST000229 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 433118
Length = 779
Score = 38.1 bits (87), Expect = 1.8
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Frame = -2
Query: 242 RSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCL 301
R+ +K+ M+ S V K++ C IC+E++ E + +C H++C
Sbjct: 643 RTSRVKTEGSQGSSAMDFSVKVDIEKEVTCPICLELLTEPLS---------LDCGHSFCQ 491
Query: 302 KCIRKWRSAKQFESKII----KSCPECR 325
CI +AK ES II SCP C+
Sbjct: 490 ACI----TAKIKESVIISRGESSCPVCQ 419
>dbj|AK005661.1|AK005661 Mus musculus adult male testis cDNA, RIKEN full-length enriched
library, clone:1700006A17:homolog to HSPC303 (FRAGMENT),
full insert sequence
Length = 756
Score = 38.1 bits (87), Expect = 1.8
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLS 75
K V C +F G C +GD C++SHDL+
Sbjct: 474 KSVVCAFFKQGQCTKGDKCKFSHDLT 551
>ref|XM_045131.1| Homo sapiens uncharacterized hypothalamus protein HT010 (HT010),
mRNA
Length = 2124
Score = 38.1 bits (87), Expect = 1.8
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLS 75
K V C +F G C +GD C++SHDL+
Sbjct: 526 KSVVCAFFKQGQCTKGDKCKFSHDLT 603
>ref|NM_064768.1| zinc finger protein
Length = 786
Score = 38.1 bits (87), Expect = 1.8
Identities = 25/61 (40%), Positives = 28/61 (44%)
Frame = +1
Query: 268 DMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRIT 327
D C IC E N S R F NC HTYC CI+ + QF+ K CP C T
Sbjct: 403 DDECKICFEKYEVTGNRSPRVF----NCGHTYCESCIQVCK--HQFQIK----CPFCTTT 552
Query: 328 S 328
S
Sbjct: 553 S 555
>ref|NM_018471.1| Homo sapiens uncharacterized hypothalamus protein HT010 (HT010),
mRNA
Length = 2140
Score = 38.1 bits (87), Expect = 1.8
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLS 75
K V C +F G C +GD C++SHDL+
Sbjct: 527 KSVVCAFFKQGQCTKGDKCKFSHDLT 604
>gb|AF161421.1|AF161421 Homo sapiens HSPC303 mRNA, partial cds
Length = 2032
Score = 38.1 bits (87), Expect = 1.8
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLS 75
K V C +F G C +GD C++SHDL+
Sbjct: 397 KSVVCAFFKQGQCTKGDKCKFSHDLT 474
>gb|AF220184.1|AF220184 Homo sapiens uncharacterized hypothalamus protein HT010 mRNA,
complete cds
Length = 2140
Score = 38.1 bits (87), Expect = 1.8
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLS 75
K V C +F G C +GD C++SHDL+
Sbjct: 527 KSVVCAFFKQGQCTKGDKCKFSHDLT 604
>dbj|AK012012.1|AK012012 Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:2610312B22:homolog to HSPC303
(FRAGMENT), Aminoacyl-transfer RNA synthetases class-II
andZinc finger C-x8-C-x5-C-x3-H type containing protein,
full insert sequence
Length = 815
Score = 38.1 bits (87), Expect = 1.8
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLS 75
K V C +F G C +GD C++SHDL+
Sbjct: 466 KSVVCAFFKQGQCTKGDKCKFSHDLT 543
>gb|AC018867.5| Homo sapiens BAC clone RP11-66C4 from 2, complete sequence
Length = 78121
Score = 38.1 bits (87), Expect = 1.8
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLS 75
K V C +F G C +GD C++SHDL+
Sbjct: 33232 KSVVCAFFKQGQCTKGDKCKFSHDLT 33309
>emb|X82200.1|HSSTAF50 H.sapiens Staf50 mRNA
Length = 2811
Score = 38.1 bits (87), Expect = 1.8
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Frame = +3
Query: 242 RSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCL 301
R+ +K+ M+ S V K++ C IC+E++ E + +C H++C
Sbjct: 78 RTSRVKTEGSQGSSAMDFSVKVDIEKEVTCPICLELLTEPLS---------LDCGHSFCQ 230
Query: 302 KCIRKWRSAKQFESKII----KSCPECR 325
CI +AK ES II SCP C+
Sbjct: 231 ACI----TAKIKESVIISRGESSCPVCQ 302
>gb|BC021102.1|BC021102 Homo sapiens, clone MGC:31837 IMAGE:5020890, mRNA, complete cds
Length = 1961
Score = 38.1 bits (87), Expect = 1.8
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLS 75
K V C +F G C +GD C++SHDL+
Sbjct: 338 KSVVCAFFKQGQCTKGDKCKFSHDLT 415
>dbj|AP001574.3|AP001574 Homo sapiens genomic DNA, chromosome 8q23, clone: KB1991G8
Length = 148582
Score = 38.1 bits (87), Expect = 1.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -3
Query: 285 SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPEC 324
S+ RF + C+H C+ C+R++ + ES++ SCPEC
Sbjct: 60434 SKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPEC 60315
>dbj|AB020755.1|AB020755 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MZN1
Length = 81672
Score = 37.7 bits (86), Expect = 2.3
Identities = 17/54 (31%), Positives = 27/54 (49%)
Frame = +1
Query: 254 EKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKW 307
+KD ++ ++ CGICME+ + +L NC H+ C+KC R W
Sbjct: 78499 KKDESEMSEIEIEREEECGICMEMNSKV---------VLPNCTHSLCIKCYRDW 78633
>dbj|AK001901.1|AK001901 Homo sapiens cDNA FLJ11039 fis, clone PLACE1004376
Length = 2024
Score = 37.7 bits (86), Expect = 2.3
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 50 KQVTCRYFMHGVCKEGDNCRYSHDLS 75
K V C +F G C +GD C++SHDL+
Sbjct: 431 KSVVCAFFKQGRCTKGDKCKFSHDLT 508
>ref|NM_121282.1| putative protein
Length = 1725
Score = 37.7 bits (86), Expect = 2.3
Identities = 24/81 (29%), Positives = 41/81 (49%), Gaps = 3/81 (3%)
Frame = +1
Query: 204 CPYAAVGECRYGENCVYIHGDVCD-MCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFA 262
C Y + G C+ GE+C +IHG D M G ++ A + +++ + HE+ M L A
Sbjct: 469 CVYFSRGLCKNGESCKFIHGGYPDNMDGNGIV-----ADSPRKMENFVRQHEEMMRLKLA 633
Query: 263 VQRSK--DMVCGICMEVVYEK 281
Q+ + + G ++ YEK
Sbjct: 634 YQQQRLASQILGRAPQLPYEK 696
>ref|NM_130336.1| putative ATP-dependent RNA helicase A
Length = 3048
Score = 37.7 bits (86), Expect = 2.3
Identities = 19/82 (23%), Positives = 37/82 (44%), Gaps = 12/82 (14%)
Frame = +1
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRG-CCAYGDHCRYEHT---------- 102
C YF++G C G C ++H L + + A C+++ C G+ C + H
Sbjct: 2197 CVYFLNGYCNRGGQCTFTHTLQSTRPA--CKFFASSQGCRNGESCLFSHAMRRRTTSYLP 2370
Query: 103 -KPLMQEEELTTVNPAAKTYPS 123
+ EE+ ++ +P +P+
Sbjct: 2371 PPQCLPEEDGSSTSPLLDLFPT 2436
>gb|AF099919.1| Caenorhabditis elegans cosmid F40G9, complete sequence
Length = 39099
Score = 37.7 bits (86), Expect = 2.3
Identities = 24/58 (41%), Positives = 27/58 (46%)
Frame = -2
Query: 271 CGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITS 328
C IC E N S R F NC HTYC CI+ + QF+ K CP C TS
Sbjct: 15338 CKICFEKYEVTGNRSPRVF----NCGHTYCESCIQVCK--HQFQIK----CPFCTTTS 15195
>emb|Z36749.1|GMZINCF G.max (Evans) mRNA for zinc-finger protein (C-terminal)
Length = 1316
Score = 37.7 bits (86), Expect = 2.3
Identities = 22/65 (33%), Positives = 31/65 (46%)
Frame = +3
Query: 264 QRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPE 323
Q ++ C IC+E Y+ + G L C H Y + CIRKW S K K CP
Sbjct: 984 QSQEEEACAICLEE-YKNMD----YVGTLKACGHDYHVGCIRKWLSMK-------KVCPI 1127
Query: 324 CRITS 328
C+ ++
Sbjct: 1128 CKASA 1142
>emb|AJ002241.1|MMMMS24 Mus musculus minisatellite tandem repeat (MMS24)
Length = 2414
Score = 37.7 bits (86), Expect = 2.3
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = -2
Query: 60 GVCKEGDNCRYSHDLSTGQSAMVC--RYYQRGCCAYGDHCRYEHTKPLMQ 107
G+C +G +CR+ + TGQ+ C R G C++G HCR+ T+ +Q
Sbjct: 1312 GMCSQGRHCRH---VLTGQTLQACAHRADTAGMCSHGRHCRHVLTRQTLQ 1172
Score = 37.7 bits (86), Expect = 2.3
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = -2
Query: 60 GVCKEGDNCRYSHDLSTGQSAMVC--RYYQRGCCAYGDHCRYEHTKPLMQ 107
G+C +G +CR+ + TGQ+ C R G C++G HCR+ T+ +Q
Sbjct: 1144 GMCSQGRHCRH---VLTGQTLQACAHRADTAGTCSHGRHCRHVLTRQTLQ 1004
Score = 37.4 bits (85), Expect = 3.0
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = -3
Query: 60 GVCKEGDNCRYSHDLSTGQSAMVCRYYQ--RGCCAYGDHCRYEHTKPLMQ 107
G+C +G +CR+ + TGQ+ C + G C++G HCR+ T+ +Q
Sbjct: 1284 GMCSQGRHCRH---VLTGQTLQACAHTADTAGTCSHGRHCRHVLTRQTLQ 1144
Score = 37.4 bits (85), Expect = 3.0
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = -1
Query: 60 GVCKEGDNCRYSHDLSTGQSAMVCRYYQ--RGCCAYGDHCRYEHTKPLMQ 107
G+C +G +CR+ + TGQ+ C + G C++G HCR+ T+ +Q
Sbjct: 1004 GMCSQGRHCRH---VLTGQTLQACAHTADTAGTCSHGRHCRHVLTRQTLQ 864
Score = 36.6 bits (83), Expect = 5.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -3
Query: 60 GVCKEGDNCRYSHDLSTGQSAMVC--RYYQRGCCAYGDHCRYEHTKPLMQ 107
G C G +CR+ + TGQ+ C R G C++G HCR+ T+ +Q
Sbjct: 1032 GTCSHGRHCRH---VLTGQTLQACAHRADTAGMCSHGRHCRHVLTRQTLQ 892
>emb|AL592312.1|ATT2L20 Arabidopsis thaliana DNA chromosome 5, BAC clone T2L20 (ESSA project)
Length = 98506
Score = 37.7 bits (86), Expect = 2.3
Identities = 24/81 (29%), Positives = 41/81 (49%), Gaps = 3/81 (3%)
Frame = -2
Query: 204 CPYAAVGECRYGENCVYIHGDVCD-MCGLQVLHPIDAAQRSQHIKSCIEAHEKDMELSFA 262
C Y + G C+ GE+C +IHG D M G ++ A + +++ + HE+ M L A
Sbjct: 79989 CVYFSRGLCKNGESCKFIHGGYPDNMDGNGIV-----ADSPRKMENFVRQHEEMMRLKLA 79825
Query: 263 VQRSK--DMVCGICMEVVYEK 281
Q+ + + G ++ YEK
Sbjct: 79824 YQQQRLASQILGRAPQLPYEK 79762
>gb|AC093909.2| Homo sapiens BAC clone RP11-756P10 from 4, complete sequence
Length = 181886
Score = 37.7 bits (86), Expect = 2.3
Identities = 20/64 (31%), Positives = 32/64 (49%)
Frame = +2
Query: 67 NCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHTKPLMQEEELTTVNPAAKTYPSDLA 126
NC + HD G+ +VC++ G C GDHC++ H L ++ A P DL
Sbjct: 10244 NCPFWHD--QGKMMVVCKHRLWGLCKKGDHCKFLHRLTSCDARMLLLLHVPA---PVDLT 10408
Query: 127 LLPE 130
++P+
Sbjct: 10409 VMPK 10420
>emb|AL391737.1|CNS06C8G chromosome I of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
Length = 199956
Score = 37.4 bits (85), Expect = 3.0
Identities = 17/79 (21%), Positives = 31/79 (38%), Gaps = 27/79 (34%)
Frame = -3
Query: 52 VTCRYFMHGVCKEGDNCRYSHD---------------------------LSTGQSAMVCR 84
V C++++ G+CK+G C + H+ + S+ C
Sbjct: 54178 VVCKHWLRGLCKKGIKCEFMHEYDLSRMPECYFFSSYGECMNPECNYIHIDPNSSSKECP 53999
Query: 85 YYQRGCCAYGDHCRYEHTK 103
+Y RG C G C+ +H +
Sbjct: 53998 WYNRGFCRNGASCKNKHVR 53942
>ref|NM_124134.1| putative protein
Length = 626
Score = 37.4 bits (85), Expect = 3.0
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = +3
Query: 253 HEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQ 312
+ D+EL+ A + C IC+ +E+ + +L C H + +KCI KW S +
Sbjct: 288 YSSDLELAGA-----EAECAICLSE-FEQGESIQ----VLEKCQHGFHVKCIHKWLSTR- 434
Query: 313 FESKIIKSCPECRITSNFVIPSE 335
SCP CR TS F SE
Sbjct: 435 ------SSCPTCR-TSIFSQHSE 482
>emb|AL031854.1|SPBC337 S.pombe chromosome II cosmid c337
Length = 37342
Score = 37.4 bits (85), Expect = 3.0
Identities = 18/49 (36%), Positives = 27/49 (54%), Gaps = 1/49 (2%)
Frame = +1
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVC-RYYQRGCCAYGDHCRYEH 101
CRYF+ G C NCRY H + ++A +C + + G C G C+ +H
Sbjct: 22465 CRYFLLGKCNN-PNCRYVH-IHYSENAPICFEFAKYGFCELGTSCKNQH 22605
>dbj|AB025628.1|AB025628 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNJ7
Length = 80117
Score = 37.4 bits (85), Expect = 3.0
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = -3
Query: 253 HEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQ 312
+ D+EL+ A + C IC+ +E+ + +L C H + +KCI KW S +
Sbjct: 61563 YSSDLELAGA-----EAECAICLSE-FEQGESIQ----VLEKCQHGFHVKCIHKWLSTR- 61417
Query: 313 FESKIIKSCPECRITSNFVIPSE 335
SCP CR TS F SE
Sbjct: 61416 ------SSCPTCR-TSIFSQHSE 61369
>dbj|AB024035.1|AB024035 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHM17
Length = 78423
Score = 37.4 bits (85), Expect = 3.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEH 101
C YF C +GD+C + HDLS + +G C GD C + H
Sbjct: 13391 CCYFATQSCMKGDDCPFDHDLS---KYPCNNFITKGFCYRGDSCLFSH 13257
>emb|AL596272.1|LMFL1994U Leishmania major Friedlin cosmid L1994, chimeric portion
Length = 21597
Score = 37.4 bits (85), Expect = 3.0
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +1
Query: 285 SERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECR--ITSNFVIPSEYWV 338
S R+ +NC H +C +CI +W + E+ CP CR IT+ ++P ++V
Sbjct: 8398 SNRKCPTATNCGHIFCWRCIAEWIQSNPQEA----VCPFCRQHITTQSLVPLYFYV 8553
>gb|L04190.1|SMRPWA33A Pleurodeles waltlii Zn-binding protein (PWa33) mRNA, complete cds
Length = 2526
Score = 37.4 bits (85), Expect = 3.0
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 266 SKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRK-WRSAKQFESKIIKSCPEC 324
++D+ C +C + E ++ C H +C CI K W SA F SCPEC
Sbjct: 538 TEDLTCPLCRSLFKEP---------VILECGHNFCKHCIDKSWESASAF------SCPEC 672
Query: 325 R 325
+
Sbjct: 673 K 675
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 12, 2002 2:19 AM
Number of letters in database: 566,364,212
Number of sequences in database: 1,171,752
Lambda K H
0.322 0.137 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,699,913,440
Number of Sequences: 1171752
Number of extensions: 44435817
Number of successful extensions: 204173
Number of sequences better than 10.0: 624
Number of HSP's better than 10.0 without gapping: 51435
Number of HSP's successfully gapped in prelim test: 8121
Number of HSP's that attempted gapping in prelim test: 115126
Number of HSP's gapped (non-prelim): 128361
length of query: 464
length of database: 1,620,443,836
effective HSP length: 139
effective length of query: 325
effective length of database: 1,457,570,308
effective search space: 473710350100
effective search space used: 473710350100
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)