TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(228 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,171,752 sequences; 566,364,212 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
gb|BC002359.1|BC002359 Homo sapiens, translin, clone MGC:85... 413 e-114
ref|NM_004622.1| Homo sapiens translin (TSN), mRNA 413 e-114
emb|X78627.1|HSTRANSLI H.sapiens mRNA for translin 413 e-114
emb|X98066.1|CATRANS C.aureus mRNA for translin 409 e-112
ref|NM_021762.1| Rattus norvegicus translin (Tsn), mRNA 409 e-112
gb|AF262356.1|AF262356 Rattus norvegicus translin mRNA, com... 409 e-112
dbj|AK010737.1|AK010737 Mus musculus ES cells cDNA, RIKEN f... 406 e-112
gb|BC004615.1|BC004615 Mus musculus, translin, clone MGC:60... 406 e-112
ref|NM_011650.1| Mus musculus translin (Tsn), mRNA 406 e-112
emb|X81464.1|MMTRANSL M.musculus mRNA for translin 406 e-112
gb|AF234179.1|AF234179 Mus musculus RNA-binding protein (Tb... 406 e-112
emb|X95074.1|GGTRANSLN G.gallus mRNA for translin 352 1e-95
gb|AF169343.1|AF169343 Xenopus laevis translin mRNA, comple... 321 2e-86
ref|XM_081102.1| similar to CG11761 gene product (D. melano... 189 1e-46
gb|AC002075.1|AC002075 Human BAC clone GS1-274A7 from 7q31,... 86 2e-32
gb|AF197019.1|AF197019 Pan troglodytes translin pseudogene,... 89 4e-32
gb|AF196998.1|AF196998 Homo sapiens translin pseudogene, pa... 86 2e-31
gb|AC018737.9| Homo sapiens BAC clone RP11-416H1 from 2, co... 119 1e-25
emb|Y12572.1|MMTRANEX6 M.musculus gene encoding translin, e... 119 2e-25
ref|NM_129258.1| translin-like protein 117 9e-25
gb|AY042792.1| Arabidopsis thaliana translin-like protein (... 117 9e-25
gb|AY064692.1| Arabidopsis thaliana translin-like protein (... 117 9e-25
gb|AC007418.8|AC007418 Drosophila melanogaster, chromosome ... 106 2e-21
gb|AE003829.2|AE003829 Drosophila melanogaster genomic scaf... 106 2e-21
gb|AC007398.6|AC007398 Drosophila melanogaster, chromosome ... 106 2e-21
emb|Y12567.1|HSTRANEX6 H.sapiens gene encoding translin, ex... 94 6e-18
emb|Y12570.1|MMTRANEX4 M.musculus gene encoding translin, e... 81 6e-14
emb|Y12565.1|HSTRANEX4 H.sapiens gene encoding translin, ex... 81 7e-14
emb|Y12564.1|HSTRANEX3 H.sapiens gene encoding translin, ex... 75 4e-12
emb|Y12569.1|MMTRANEX3 M.musculus gene encoding translin, e... 73 2e-11
ref|XM_094947.1| Homo sapiens similar to translin (LOC16824... 72 4e-11
emb|Y12563.1|HSTRANEX2 H.sapiens gene encoding translin, ex... 63 2e-08
emb|Y12568.1|MMTRANEX2 M.musculus gene encoding translin, e... 62 3e-08
emb|AL136538.1|SPAC30 S.pombe chromosome I cosmid c30 62 5e-08
emb|Y12566.1|HSTRANEX5 H.sapiens gene encoding translin, ex... 58 5e-07
emb|Y12571.1|MMTRANEX5 M.musculus gene encoding translin, e... 58 7e-07
ref|NM_016909.1| Mus musculus translin-associated factor X ... 54 7e-06
gb|AF187040.1|AF187040 Mus musculus translin associated pro... 54 7e-06
gb|BC004611.1|BC004611 Mus musculus, translin-associated fa... 54 7e-06
gb|BC011797.1|BC011797 Homo sapiens, Similar to translin-as... 54 1e-05
ref|NM_005999.1| Homo sapiens translin-associated factor X ... 54 1e-05
emb|X95073.1|HSTRAXGEN H.sapiens mRNA for translin associat... 54 1e-05
gb|BC010376.1|BC010376 Homo sapiens, translin-associated fa... 54 1e-05
gb|AC006922.6|AC006922 Arabidopsis thaliana chromosome II s... 53 2e-05
ref|NM_022262.1| Rattus norvegicus translin-associated fact... 52 4e-05
gb|AF262357.1|AF262357 Rattus norvegicus trax mRNA, complet... 52 4e-05
emb|X95075.1|MMTRAPROM M.musculus mRNA for translin promoter 45 0.006
emb|X95076.1|HSTRAPROM H.sapiens mRNA for translin promoter 45 0.006
dbj|AK011220.1|AK011220 Mus musculus 10 days embryo whole b... 45 0.006
gb|AF271269.1|AF271267S3 Homo sapiens translin-like protein... 42 0.048
emb|Z75272.1|SCYOR364W S.cerevisiae chromosome XV reading f... 35 4.5
>gb|BC002359.1|BC002359 Homo sapiens, translin, clone MGC:8527 IMAGE:2822564, mRNA,
complete cds
Length = 1318
Score = 413 bits (1061), Expect = e-114
Identities = 213/228 (93%), Positives = 213/228 (93%)
Frame = +1
Query: 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 60
MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK
Sbjct: 115 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 294
Query: 61 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 120
AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT
Sbjct: 295 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 474
Query: 121 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 180
EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG
Sbjct: 475 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 654
Query: 181 FRLLNLKNDSLRKRYDGXXXXXXXXXXXXXXXSIRGFNKETAAACVEK 228
FRLLNLKNDSLRKRYDG SIRGFNKETAAACVEK
Sbjct: 655 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACVEK 798
>ref|NM_004622.1| Homo sapiens translin (TSN), mRNA
Length = 2739
Score = 413 bits (1061), Expect = e-114
Identities = 213/228 (93%), Positives = 213/228 (93%)
Frame = +1
Query: 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 60
MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK
Sbjct: 82 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 261
Query: 61 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 120
AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT
Sbjct: 262 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 441
Query: 121 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 180
EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG
Sbjct: 442 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 621
Query: 181 FRLLNLKNDSLRKRYDGXXXXXXXXXXXXXXXSIRGFNKETAAACVEK 228
FRLLNLKNDSLRKRYDG SIRGFNKETAAACVEK
Sbjct: 622 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACVEK 765
>emb|X78627.1|HSTRANSLI H.sapiens mRNA for translin
Length = 2739
Score = 413 bits (1061), Expect = e-114
Identities = 213/228 (93%), Positives = 213/228 (93%)
Frame = +1
Query: 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 60
MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK
Sbjct: 82 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 261
Query: 61 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 120
AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT
Sbjct: 262 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 441
Query: 121 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 180
EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG
Sbjct: 442 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 621
Query: 181 FRLLNLKNDSLRKRYDGXXXXXXXXXXXXXXXSIRGFNKETAAACVEK 228
FRLLNLKNDSLRKRYDG SIRGFNKETAAACVEK
Sbjct: 622 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACVEK 765
>emb|X98066.1|CATRANS C.aureus mRNA for translin
Length = 1095
Score = 409 bits (1050), Expect = e-112
Identities = 211/228 (92%), Positives = 211/228 (92%)
Frame = +1
Query: 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 60
MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQG GFQDIPKRCLK
Sbjct: 58 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLK 237
Query: 61 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 120
AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT
Sbjct: 238 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 417
Query: 121 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 180
EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG
Sbjct: 418 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 597
Query: 181 FRLLNLKNDSLRKRYDGXXXXXXXXXXXXXXXSIRGFNKETAAACVEK 228
FRLLNLKNDSLRKRYDG SIRGFNKETAAAC EK
Sbjct: 598 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACGEK 741
>ref|NM_021762.1| Rattus norvegicus translin (Tsn), mRNA
Length = 988
Score = 409 bits (1050), Expect = e-112
Identities = 211/228 (92%), Positives = 211/228 (92%)
Frame = +2
Query: 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 60
MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQG GFQDIPKRCLK
Sbjct: 107 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLK 286
Query: 61 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 120
AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT
Sbjct: 287 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 466
Query: 121 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 180
EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG
Sbjct: 467 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 646
Query: 181 FRLLNLKNDSLRKRYDGXXXXXXXXXXXXXXXSIRGFNKETAAACVEK 228
FRLLNLKNDSLRKRYDG SIRGFNKETAAAC EK
Sbjct: 647 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACGEK 790
>gb|AF262356.1|AF262356 Rattus norvegicus translin mRNA, complete cds
Length = 988
Score = 409 bits (1050), Expect = e-112
Identities = 211/228 (92%), Positives = 211/228 (92%)
Frame = +2
Query: 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 60
MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQG GFQDIPKRCLK
Sbjct: 107 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLK 286
Query: 61 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 120
AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT
Sbjct: 287 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 466
Query: 121 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 180
EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG
Sbjct: 467 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 646
Query: 181 FRLLNLKNDSLRKRYDGXXXXXXXXXXXXXXXSIRGFNKETAAACVEK 228
FRLLNLKNDSLRKRYDG SIRGFNKETAAAC EK
Sbjct: 647 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACGEK 790
>dbj|AK010737.1|AK010737 Mus musculus ES cells cDNA, RIKEN full-length enriched library,
clone:2410083E08:translin, full insert sequence
Length = 1235
Score = 406 bits (1044), Expect = e-112
Identities = 210/228 (92%), Positives = 210/228 (92%)
Frame = +2
Query: 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 60
MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQG GFQDIPKRCLK
Sbjct: 65 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLK 244
Query: 61 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 120
AREHF TVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT
Sbjct: 245 AREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 424
Query: 121 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 180
EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG
Sbjct: 425 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 604
Query: 181 FRLLNLKNDSLRKRYDGXXXXXXXXXXXXXXXSIRGFNKETAAACVEK 228
FRLLNLKNDSLRKRYDG SIRGFNKETAAAC EK
Sbjct: 605 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACGEK 748
>gb|BC004615.1|BC004615 Mus musculus, translin, clone MGC:6020 IMAGE:3585366, mRNA,
complete cds
Length = 979
Score = 406 bits (1044), Expect = e-112
Identities = 210/228 (92%), Positives = 210/228 (92%)
Frame = +2
Query: 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 60
MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQG GFQDIPKRCLK
Sbjct: 113 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLK 292
Query: 61 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 120
AREHF TVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT
Sbjct: 293 AREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 472
Query: 121 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 180
EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG
Sbjct: 473 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 652
Query: 181 FRLLNLKNDSLRKRYDGXXXXXXXXXXXXXXXSIRGFNKETAAACVEK 228
FRLLNLKNDSLRKRYDG SIRGFNKETAAAC EK
Sbjct: 653 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACGEK 796
>ref|NM_011650.1| Mus musculus translin (Tsn), mRNA
Length = 991
Score = 406 bits (1044), Expect = e-112
Identities = 210/228 (92%), Positives = 210/228 (92%)
Frame = +1
Query: 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 60
MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQG GFQDIPKRCLK
Sbjct: 67 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLK 246
Query: 61 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 120
AREHF TVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT
Sbjct: 247 AREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 426
Query: 121 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 180
EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG
Sbjct: 427 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 606
Query: 181 FRLLNLKNDSLRKRYDGXXXXXXXXXXXXXXXSIRGFNKETAAACVEK 228
FRLLNLKNDSLRKRYDG SIRGFNKETAAAC EK
Sbjct: 607 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACGEK 750
>emb|X81464.1|MMTRANSL M.musculus mRNA for translin
Length = 991
Score = 406 bits (1044), Expect = e-112
Identities = 210/228 (92%), Positives = 210/228 (92%)
Frame = +1
Query: 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 60
MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQG GFQDIPKRCLK
Sbjct: 67 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLK 246
Query: 61 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 120
AREHF TVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT
Sbjct: 247 AREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 426
Query: 121 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 180
EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG
Sbjct: 427 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 606
Query: 181 FRLLNLKNDSLRKRYDGXXXXXXXXXXXXXXXSIRGFNKETAAACVEK 228
FRLLNLKNDSLRKRYDG SIRGFNKETAAAC EK
Sbjct: 607 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACGEK 750
>gb|AF234179.1|AF234179 Mus musculus RNA-binding protein (Tbrbp) mRNA, complete cds
Length = 3065
Score = 406 bits (1044), Expect = e-112
Identities = 210/228 (92%), Positives = 210/228 (92%)
Frame = +1
Query: 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 60
MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQG GFQDIPKRCLK
Sbjct: 67 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLK 246
Query: 61 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 120
AREHF TVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT
Sbjct: 247 AREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 426
Query: 121 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 180
EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG
Sbjct: 427 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 606
Query: 181 FRLLNLKNDSLRKRYDGXXXXXXXXXXXXXXXSIRGFNKETAAACVEK 228
FRLLNLKNDSLRKRYDG SIRGFNKETAAAC EK
Sbjct: 607 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACGEK 750
>emb|X95074.1|GGTRANSLN G.gallus mRNA for translin
Length = 984
Score = 352 bits (903), Expect = 1e-95
Identities = 183/229 (79%), Positives = 196/229 (84%), Gaps = 1/229 (0%)
Frame = +2
Query: 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 60
MSVS +FV LQG L A+QDIREEIRKVVQ+LEQTARE+LTL QGVHQGAGFQDIPK+C K
Sbjct: 5 MSVSAMFVALQGALTADQDIREEIRKVVQALEQTAREMLTLPQGVHQGAGFQDIPKKCQK 184
Query: 61 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 120
AREHFGTV+T + SLKTKFPA+QYYRFHEHWRFVLQRLVFLA+FVVYLETETLVTREAV
Sbjct: 185 AREHFGTVRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLVTREAVA 364
Query: 121 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 180
EILGIE DRE+GFHLD+EDYLSGVL LASEL+RL+VNSVTAGDYSRPL ISTFINELDSG
Sbjct: 365 EILGIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRISTFINELDSG 544
Query: 181 FRLLNLKNDSLRKRYDGXXXXXXXXXXXXXXXSIRGFNKE-TAAACVEK 228
FRLLNLKNDSLRKRYDG SIRG NKE T A EK
Sbjct: 545 FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLNKEATGGAGGEK 691
>gb|AF169343.1|AF169343 Xenopus laevis translin mRNA, complete cds
Length = 874
Score = 321 bits (823), Expect = 2e-86
Identities = 165/220 (75%), Positives = 186/220 (84%)
Frame = +1
Query: 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 60
MSV ++FVELQ L+A+QD+REEIRKVVQSLEQTAREIL LLQGVHQ AGF+DIP +CLK
Sbjct: 136 MSVIDMFVELQCGLSADQDVREEIRKVVQSLEQTAREILILLQGVHQEAGFKDIPAKCLK 315
Query: 61 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 120
AREH+ TV+ L +L+TKFPAEQYY+FH+ WRFVLQRLVFLA+F+VYLETETLVTREAV
Sbjct: 316 AREHYSTVRDQLATLQTKFPAEQYYKFHDQWRFVLQRLVFLASFLVYLETETLVTREAVA 495
Query: 121 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 180
EILGIE REKGFHLD+EDYLSGVL LA+ELSRL+VNSV AGDYSRPL I++FINELD G
Sbjct: 496 EILGIEYVREKGFHLDIEDYLSGVLNLANELSRLAVNSVIAGDYSRPLRIASFINELDFG 675
Query: 181 FRLLNLKNDSLRKRYDGXXXXXXXXXXXXXXXSIRGFNKE 220
FRLLNLKNDSLRKRYDG SIRG +KE
Sbjct: 676 FRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRGLSKE 795
>ref|XM_081102.1| similar to CG11761 gene product (D. melanogaster), mRNA
Length = 862
Score = 189 bits (481), Expect = 1e-46
Identities = 101/216 (46%), Positives = 133/216 (60%)
Frame = +1
Query: 5 EIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREH 64
+IF Q ++ EQ++RE IR VV+ +E ++E LQ +H + I C AR+
Sbjct: 91 DIFSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIH--SDLSQISAACGLARKQ 264
Query: 65 FGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILG 124
L PA QYYR+ +HW F+ QRL+F+ A V+YLE LVTRE V E+LG
Sbjct: 265 VELCAQKYQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLG 444
Query: 125 IEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLL 184
++ + +GFHLDVEDYL G+L LASELSR + NSVT GDY RPL+IS FI +L++GFRLL
Sbjct: 445 LKISQSEGFHLDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGDLNTGFRLL 624
Query: 185 NLKNDSLRKRYDGXXXXXXXXXXXXXXXSIRGFNKE 220
NLKND LRKR+D SIRG + +
Sbjct: 625 NLKNDGLRKRFDALKYDVKKIEEVVYDVSIRGLSSK 732
>gb|AC002075.1|AC002075 Human BAC clone GS1-274A7 from 7q31, complete sequence [Homo sapiens]
Length = 120030
Score = 86.3 bits (212), Expect(2) = 2e-32
Identities = 63/154 (40%), Positives = 80/154 (51%), Gaps = 7/154 (4%)
Frame = -1
Query: 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 60
MS +EIFVELQGF + + +K+ SL+QTA EI+ G
Sbjct: 5895 MSATEIFVELQGFCLPRRTSARKSKKL*-SLQQTA*EIVNSTTTCPSGCWVSG------H 5737
Query: 61 AREHFGTVKTHLTSLKTKFPAEQY-------YRFHEHWRFVLQRLVFLAAFVVYLETETL 113
++E F ++ T S T +E+ + HEHWRFVL V V LETET
Sbjct: 5736 SKEVFESLGTFWYSKNTPNTSEEQVAC*TVCHEVHEHWRFVLPHTVVFPELVACLETET- 5560
Query: 114 VTREAVTEILGIEPDREKGFHLDVEDYLSGVLIL 147
EA+TEI IEPD+EK FH+DVED LSGV L
Sbjct: 5559 --PEAITEIRVIEPDKEKRFHVDVEDPLSGVQFL 5464
Score = 77.4 bits (189), Expect(2) = 2e-32
Identities = 44/84 (52%), Positives = 54/84 (63%), Gaps = 1/84 (1%)
Frame = -3
Query: 146 ILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKN-DSLRKRYDGXXXXXXX 204
ILASEL RLS++ ++AGD S+PLH++TF NE F LL+LK+ SLRK YDG
Sbjct: 5470 ILASELLRLSLSGMSAGDNSQPLHVATFNNEWHPNFHLLSLKHYSSLRKPYDGLW*DVKK 5291
Query: 205 XXXXXXXXSIRGFNKETAAACVEK 228
SI+GFNKE AAC EK
Sbjct: 5290 TEEVFYILSIQGFNKEIEAACTEK 5219
>gb|AF197019.1|AF197019 Pan troglodytes translin pseudogene, partial sequence
Length = 949
Score = 88.6 bits (218), Expect(2) = 4e-32
Identities = 64/154 (41%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Frame = -3
Query: 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 60
MS +EIFVELQGF + + +K+ SL+QTA EI+ G
Sbjct: 941 MSATEIFVELQGFCLPRRTSARKSKKL*-SLQQTA*EIVNSTTTCPSGCWVSG------H 783
Query: 61 AREHFGTVKTHLTSLKTKFPAEQY-------YRFHEHWRFVLQRLVFLAAFVVYLETETL 113
++E F ++ T S T +E+ + HEHWRFVLQ V V LETET
Sbjct: 782 SKEVFESLGTFWYSKNTPNTSEEQVAC*TVCHEVHEHWRFVLQHTVVFPELVACLETET- 606
Query: 114 VTREAVTEILGIEPDREKGFHLDVEDYLSGVLIL 147
EA+TEI IEPD+EK FH+DVED LSGV L
Sbjct: 605 --PEAITEIRVIEPDKEKRFHVDVEDPLSGVQFL 510
Score = 73.9 bits (180), Expect(2) = 4e-32
Identities = 43/84 (51%), Positives = 53/84 (62%), Gaps = 1/84 (1%)
Frame = -2
Query: 146 ILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKN-DSLRKRYDGXXXXXXX 204
ILASEL RLS++ ++AGD S+PLH++TF NE LL+LK+ SLRK YDG
Sbjct: 516 ILASELLRLSLSGMSAGDNSQPLHVATFNNEWHPXXXLLSLKHYSSLRKPYDGLW*DVKK 337
Query: 205 XXXXXXXXSIRGFNKETAAACVEK 228
SI+GFNKE AAC EK
Sbjct: 336 TEEVFYILSIQGFNKEIEAACTEK 265
>gb|AF196998.1|AF196998 Homo sapiens translin pseudogene, partial sequence
Length = 951
Score = 86.3 bits (212), Expect(2) = 2e-31
Identities = 63/154 (40%), Positives = 80/154 (51%), Gaps = 7/154 (4%)
Frame = -3
Query: 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 60
MS +EIFVELQGF + + +K+ SL+QTA EI+ G
Sbjct: 943 MSATEIFVELQGFCLPRRTSARKSKKL*-SLQQTA*EIVNSTTTCPSGCWVSG------H 785
Query: 61 AREHFGTVKTHLTSLKTKFPAEQY-------YRFHEHWRFVLQRLVFLAAFVVYLETETL 113
++E F ++ T S T +E+ + HEHWRFVL V V LETET
Sbjct: 784 SKEVFESLGTFWYSKNTPNTSEEQVAC*TVCHEVHEHWRFVLPHTVVFPELVACLETET- 608
Query: 114 VTREAVTEILGIEPDREKGFHLDVEDYLSGVLIL 147
EA+TEI IEPD+EK FH+DVED LSGV L
Sbjct: 607 --PEAITEIRVIEPDKEKRFHVDVEDPLSGVQFL 512
Score = 73.9 bits (180), Expect(2) = 2e-31
Identities = 43/84 (51%), Positives = 53/84 (62%), Gaps = 1/84 (1%)
Frame = -2
Query: 146 ILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKN-DSLRKRYDGXXXXXXX 204
ILASEL RLS++ ++AGD S+PLH++TF NE LL+LK+ SLRK YDG
Sbjct: 518 ILASELLRLSLSGMSAGDNSQPLHVATFNNEWHPXXXLLSLKHYSSLRKPYDGLW*DVKK 339
Query: 205 XXXXXXXXSIRGFNKETAAACVEK 228
SI+GFNKE AAC EK
Sbjct: 338 TEEVFYILSIQGFNKEIEAACTEK 267
>gb|AC018737.9| Homo sapiens BAC clone RP11-416H1 from 2, complete sequence
Length = 206454
Score = 119 bits (299), Expect = 1e-25
Identities = 62/77 (80%), Positives = 62/77 (80%)
Frame = +1
Query: 152 SRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGXXXXXXXXXXXXXX 211
SRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDG
Sbjct: 159235 SRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYD 159414
Query: 212 XSIRGFNKETAAACVEK 228
SIRGFNKETAAACVEK
Sbjct: 159415 LSIRGFNKETAAACVEK 159465
Score = 80.9 bits (198), Expect = 7e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +3
Query: 86 RFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILG 124
RFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILG
Sbjct: 155508 RFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILG 155624
Score = 75.1 bits (183), Expect = 4e-12
Identities = 33/34 (97%), Positives = 34/34 (99%)
Frame = +2
Query: 54 IPKRCLKAREHFGTVKTHLTSLKTKFPAEQYYRF 87
+PKRCLKAREHFGTVKTHLTSLKTKFPAEQYYRF
Sbjct: 152810 VPKRCLKAREHFGTVKTHLTSLKTKFPAEQYYRF 152911
Score = 62.8 bits (151), Expect = 2e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 23 EIRKVVQSLEQTAREILTLLQGVHQGAGFQD 53
EIRKVVQSLEQTAREILTLLQGVHQGAGFQD
Sbjct: 151341 EIRKVVQSLEQTAREILTLLQGVHQGAGFQD 151433
Score = 57.8 bits (138), Expect = 7e-07
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = +1
Query: 125 IEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVT 160
+EPDREKGFHLDVEDYLSGVLILASEL V+SVT
Sbjct: 157105 VEPDREKGFHLDVEDYLSGVLILASEL----VSSVT 157200
Score = 44.7 bits (104), Expect = 0.006
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +1
Query: 1 MSVSEIFVELQGFLAAEQDIRE 22
MSVSEIFVELQGFLAAEQDIRE
Sbjct: 149881 MSVSEIFVELQGFLAAEQDIRE 149946
>emb|Y12572.1|MMTRANEX6 M.musculus gene encoding translin, exon 6
Length = 451
Score = 119 bits (298), Expect = 2e-25
Identities = 66/95 (69%), Positives = 67/95 (70%)
Frame = +3
Query: 134 HLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRK 193
H DV D+ V SRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRK
Sbjct: 15 HSDVSDFFLPVQ------SRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRK 176
Query: 194 RYDGXXXXXXXXXXXXXXXSIRGFNKETAAACVEK 228
RYDG SIRGFNKETAAAC EK
Sbjct: 177 RYDGLKYDVKKVEEVVYDLSIRGFNKETAAACGEK 281
>ref|NM_129258.1| translin-like protein
Length = 1155
Score = 117 bits (292), Expect = 9e-25
Identities = 74/198 (37%), Positives = 108/198 (54%), Gaps = 3/198 (1%)
Frame = +3
Query: 2 SVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKA 61
S+ + F + L +RE+IR VV +E R I L VHQ + IP+ KA
Sbjct: 225 SLEKQFESFRVQLEESAALREQIRAVVMEIESATRLIQANLLLVHQS---RPIPEVIEKA 395
Query: 62 REHFGTVKTH---LTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREA 118
+E +K + L + + P QYYR+H WR Q +V AF+ +LET TL+
Sbjct: 396 KEKIVDLKQYYGRLAEILEECPG-QYYRYHGDWRSETQAVVSQLAFMHWLETGTLLVHTE 572
Query: 119 VTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELD 178
E LG+ F L+ EDYL+G+ ++++L R VN VTAGDY P + F+ +L
Sbjct: 573 AEEKLGLN---SLEFGLETEDYLTGICFMSNDLPRYVVNRVTAGDYDCPRKVMNFLTDLH 743
Query: 179 SGFRLLNLKNDSLRKRYD 196
+ FR+LNL+ND LRK++D
Sbjct: 744 AAFRMLNLRNDFLRKKFD 797
>gb|AY042792.1| Arabidopsis thaliana translin-like protein (At2g37020; T1J8.20)
mRNA, complete cds
Length = 1155
Score = 117 bits (292), Expect = 9e-25
Identities = 74/198 (37%), Positives = 108/198 (54%), Gaps = 3/198 (1%)
Frame = +3
Query: 2 SVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKA 61
S+ + F + L +RE+IR VV +E R I L VHQ + IP+ KA
Sbjct: 225 SLEKQFESFRVQLEESAALREQIRAVVMEIESATRLIQANLLLVHQS---RPIPEVIEKA 395
Query: 62 REHFGTVKTH---LTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREA 118
+E +K + L + + P QYYR+H WR Q +V AF+ +LET TL+
Sbjct: 396 KEKIVDLKQYYGRLAEILEECPG-QYYRYHGDWRSETQAVVSQLAFMHWLETGTLLVHTE 572
Query: 119 VTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELD 178
E LG+ F L+ EDYL+G+ ++++L R VN VTAGDY P + F+ +L
Sbjct: 573 AEEKLGLN---SLEFGLETEDYLTGICFMSNDLPRYVVNRVTAGDYDCPRKVMNFLTDLH 743
Query: 179 SGFRLLNLKNDSLRKRYD 196
+ FR+LNL+ND LRK++D
Sbjct: 744 AAFRMLNLRNDFLRKKFD 797
>gb|AY064692.1| Arabidopsis thaliana translin-like protein (At2g37020; T1J8.20)
mRNA, complete cds
Length = 769
Score = 117 bits (292), Expect = 9e-25
Identities = 74/198 (37%), Positives = 108/198 (54%), Gaps = 3/198 (1%)
Frame = +1
Query: 2 SVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKA 61
S+ + F + L +RE+IR VV +E R I L VHQ + IP+ KA
Sbjct: 31 SLEKQFESFRVQLEESAALREQIRAVVMEIESATRLIQANLLLVHQS---RPIPEVIEKA 201
Query: 62 REHFGTVKTH---LTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREA 118
+E +K + L + + P QYYR+H WR Q +V AF+ +LET TL+
Sbjct: 202 KEKIVDLKQYYGRLAEILEECPG-QYYRYHGDWRSETQAVVSQLAFMHWLETGTLLVHTE 378
Query: 119 VTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELD 178
E LG+ F L+ EDYL+G+ ++++L R VN VTAGDY P + F+ +L
Sbjct: 379 AEEKLGLN---SLEFGLETEDYLTGICFMSNDLPRYVVNRVTAGDYDCPRKVMNFLTDLH 549
Query: 179 SGFRLLNLKNDSLRKRYD 196
+ FR+LNL+ND LRK++D
Sbjct: 550 AAFRMLNLRNDFLRKKFD 603
>gb|AC007418.8|AC007418 Drosophila melanogaster, chromosome 2R, region 47A-47B, BAC clone
BACR16P22, complete sequence
Length = 186690
Score = 106 bits (264), Expect = 2e-21
Identities = 54/104 (51%), Positives = 68/104 (64%)
Frame = -2
Query: 117 EAVTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINE 176
E + ++ + +GFHLDVEDYL G+L LASELSR + NSVT GDY RPL+IS FI +
Sbjct: 36191 EIIVNYSTVKISQSEGFHLDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGD 36012
Query: 177 LDSGFRLLNLKNDSLRKRYDGXXXXXXXXXXXXXXXSIRGFNKE 220
L++GFRLLNLKND LRKR+D SIRG + +
Sbjct: 36011 LNTGFRLLNLKNDGLRKRFDALKYDVKKIEEVVYDVSIRGLSSK 35880
Score = 55.5 bits (132), Expect = 3e-06
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -3
Query: 84 YYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDRE 130
+ R+ +HW F+ QRL+F+ A V+YLE LVTRE V E+LG + D E
Sbjct: 36346 FSRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLGCKLDLE 36206
>gb|AE003829.2|AE003829 Drosophila melanogaster genomic scaffold 142000013386047 section 14 of
52, complete sequence
Length = 258463
Score = 106 bits (264), Expect = 2e-21
Identities = 54/104 (51%), Positives = 68/104 (64%)
Frame = -2
Query: 117 EAVTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINE 176
E + ++ + +GFHLDVEDYL G+L LASELSR + NSVT GDY RPL+IS FI +
Sbjct: 108711 EIIVNYSTVKISQSEGFHLDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGD 108532
Query: 177 LDSGFRLLNLKNDSLRKRYDGXXXXXXXXXXXXXXXSIRGFNKE 220
L++GFRLLNLKND LRKR+D SIRG + +
Sbjct: 108531 LNTGFRLLNLKNDGLRKRFDALKYDVKKIEEVVYDVSIRGLSSK 108400
Score = 55.5 bits (132), Expect = 3e-06
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -3
Query: 84 YYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDRE 130
+ R+ +HW F+ QRL+F+ A V+YLE LVTRE V E+LG + D E
Sbjct: 108866 FSRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLGCKLDLE 108726
>gb|AC007398.6|AC007398 Drosophila melanogaster, chromosome 2R, region 47A-47B, BAC clone
BACR20O22, complete sequence
Length = 168567
Score = 106 bits (264), Expect = 2e-21
Identities = 54/104 (51%), Positives = 68/104 (64%)
Frame = -2
Query: 117 EAVTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINE 176
E + ++ + +GFHLDVEDYL G+L LASELSR + NSVT GDY RPL+IS FI +
Sbjct: 136931 EIIVNYSTVKISQSEGFHLDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGD 136752
Query: 177 LDSGFRLLNLKNDSLRKRYDGXXXXXXXXXXXXXXXSIRGFNKE 220
L++GFRLLNLKND LRKR+D SIRG + +
Sbjct: 136751 LNTGFRLLNLKNDGLRKRFDALKYDVKKIEEVVYDVSIRGLSSK 136620
Score = 55.5 bits (132), Expect = 3e-06
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -3
Query: 84 YYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDRE 130
+ R+ +HW F+ QRL+F+ A V+YLE LVTRE V E+LG + D E
Sbjct: 137086 FSRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLGCKLDLE 136946
>emb|Y12567.1|HSTRANEX6 H.sapiens gene encoding translin, exon 6
Length = 241
Score = 94.4 bits (233), Expect = 6e-18
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +3
Query: 152 SRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDG 197
SRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDG
Sbjct: 51 SRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDG 188
>emb|Y12570.1|MMTRANEX4 M.musculus gene encoding translin, exon 4
Length = 212
Score = 81.3 bits (199), Expect = 6e-14
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +1
Query: 84 YYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILG 124
+ RFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILG
Sbjct: 43 FCRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILG 165
>emb|Y12565.1|HSTRANEX4 H.sapiens gene encoding translin, exon 4
Length = 216
Score = 80.9 bits (198), Expect = 7e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 86 RFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILG 124
RFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILG
Sbjct: 49 RFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILG 165
>emb|Y12564.1|HSTRANEX3 H.sapiens gene encoding translin, exon 3
Length = 197
Score = 75.1 bits (183), Expect = 4e-12
Identities = 33/34 (97%), Positives = 34/34 (99%)
Frame = +2
Query: 54 IPKRCLKAREHFGTVKTHLTSLKTKFPAEQYYRF 87
+PKRCLKAREHFGTVKTHLTSLKTKFPAEQYYRF
Sbjct: 50 VPKRCLKAREHFGTVKTHLTSLKTKFPAEQYYRF 151
>emb|Y12569.1|MMTRANEX3 M.musculus gene encoding translin, exon 3
Length = 197
Score = 72.8 bits (177), Expect = 2e-11
Identities = 32/34 (94%), Positives = 33/34 (96%)
Frame = +2
Query: 54 IPKRCLKAREHFGTVKTHLTSLKTKFPAEQYYRF 87
+PKRCLKAREHF TVKTHLTSLKTKFPAEQYYRF
Sbjct: 50 VPKRCLKAREHFSTVKTHLTSLKTKFPAEQYYRF 151
>ref|XM_094947.1| Homo sapiens similar to translin (LOC168242), mRNA
Length = 374
Score = 71.6 bits (174), Expect = 4e-11
Identities = 48/98 (48%), Positives = 55/98 (55%), Gaps = 1/98 (1%)
Frame = +3
Query: 101 LAAFVVYLETETLVTREAVTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVT 160
L V LETET EA+TEI IEPD+EK FH+DVED LSGV L
Sbjct: 135 LPELVACLETET---PEAITEIRVIEPDKEKRFHVDVEDPLSGVQFLL------------ 269
Query: 161 AGDYSRPLHISTFINELDSGFRLLNLKN-DSLRKRYDG 197
PLH++TF NE F LL+LK+ SLRK YDG
Sbjct: 270 ------PLHVATFNNEWHPNFHLLSLKHYSSLRKPYDG 365
>emb|Y12563.1|HSTRANEX2 H.sapiens gene encoding translin, exon 2 (and joined CDS)
Length = 194
Score = 62.8 bits (151), Expect = 2e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 23 EIRKVVQSLEQTAREILTLLQGVHQGAGFQD 53
EIRKVVQSLEQTAREILTLLQGVHQGAGFQD
Sbjct: 51 EIRKVVQSLEQTAREILTLLQGVHQGAGFQD 143
>emb|Y12568.1|MMTRANEX2 M.musculus gene encoding translin, exon 2 (and joined CDS)
Length = 172
Score = 62.4 bits (150), Expect = 3e-08
Identities = 32/43 (74%), Positives = 34/43 (78%)
Frame = +1
Query: 23 EIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHF 65
EIRKVVQSLEQTAREILTLLQGVHQG GFQD C ++F
Sbjct: 43 EIRKVVQSLEQTAREILTLLQGVHQGTGFQDSKFFCFDV*KNF 171
>emb|AL136538.1|SPAC30 S.pombe chromosome I cosmid c30
Length = 36315
Score = 61.6 bits (148), Expect = 5e-08
Identities = 35/82 (42%), Positives = 46/82 (55%), Gaps = 14/82 (17%)
Frame = -2
Query: 130 EKGFHLDVEDYLSGVLILASEL--------------SRLSVNSVTAGDYSRPLHISTFIN 175
E FHL +E YL VL L SEL +R SVNSV +G+Y P I
Sbjct: 8372 ESTFHLSIEQYLHAVLSLCSELVYILFNNPN*HNF*ARQSVNSVISGNYHIPFEALNTIQ 8193
Query: 176 ELDSGFRLLNLKNDSLRKRYDG 197
++ S F++L+LKNDSLR+ +DG
Sbjct: 8192 KVHSSFQVLSLKNDSLRRHFDG 8127
>emb|Y12566.1|HSTRANEX5 H.sapiens gene encoding translin, exon 5
Length = 180
Score = 58.2 bits (139), Expect = 5e-07
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +2
Query: 125 IEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTA 161
+EPDREKGFHLDVEDYLSGVLILASEL V+SVT+
Sbjct: 50 VEPDREKGFHLDVEDYLSGVLILASEL----VSSVTS 148
>emb|Y12571.1|MMTRANEX5 M.musculus gene encoding translin, exon 5
Length = 180
Score = 57.8 bits (138), Expect = 7e-07
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 125 IEPDREKGFHLDVEDYLSGVLILASELSR 153
+EPDREKGFHLDVEDYLSGVLILASEL R
Sbjct: 50 VEPDREKGFHLDVEDYLSGVLILASELVR 136
>ref|NM_016909.1| Mus musculus translin-associated factor X (Tsnax), mRNA
Length = 2410
Score = 54.3 bits (129), Expect = 7e-06
Identities = 45/196 (22%), Positives = 81/196 (40%), Gaps = 18/196 (9%)
Frame = +3
Query: 7 FVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFG 66
F Q L A D E + K+ + + ++ + LL H+ D+ + ++
Sbjct: 315 FKSFQQELDARHDKYERLVKLSRDITVESKRTIFLL---HRITSAPDMEEILTESESKLD 485
Query: 67 TVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIE 126
V+ + + + E ++FH LQ V +F +++T +L++ E + + L
Sbjct: 486 GVRQKILQVAQELSGEDMHQFHRAVTTGLQEYVEAVSFQHFIKTRSLISMEEINKQLTFT 665
Query: 127 PD-------------REKGF-----HLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPL 168
+ +EK L DYL GV L EL R+ +NSV GD P
Sbjct: 666 AEDSGKESKTPPAEGQEKQLVTWRLKLTPVDYLLGVADLTGELMRMCINSVGNGDIDTPF 845
Query: 169 HISTFINELDSGFRLL 184
+S F+ ++ GF +
Sbjct: 846 EVSQFLRQVYDGFSFI 893
>gb|AF187040.1|AF187040 Mus musculus translin associated protein X (Trax) mRNA, complete
cds
Length = 2410
Score = 54.3 bits (129), Expect = 7e-06
Identities = 45/196 (22%), Positives = 81/196 (40%), Gaps = 18/196 (9%)
Frame = +3
Query: 7 FVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFG 66
F Q L A D E + K+ + + ++ + LL H+ D+ + ++
Sbjct: 315 FKSFQQELDARHDKYERLVKLSRDITVESKRTIFLL---HRITSAPDMEEILTESESKLD 485
Query: 67 TVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIE 126
V+ + + + E ++FH LQ V +F +++T +L++ E + + L
Sbjct: 486 GVRQKILQVAQELSGEDMHQFHRAVTTGLQEYVEAVSFQHFIKTRSLISMEEINKQLTFT 665
Query: 127 PD-------------REKGF-----HLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPL 168
+ +EK L DYL GV L EL R+ +NSV GD P
Sbjct: 666 AEDSGKESKTPPAEGQEKQLVTWRLKLTPVDYLLGVADLTGELMRMCINSVGNGDIDTPF 845
Query: 169 HISTFINELDSGFRLL 184
+S F+ ++ GF +
Sbjct: 846 EVSQFLRQVYDGFSFI 893
>gb|BC004611.1|BC004611 Mus musculus, translin-associated factor X, clone MGC:7979
IMAGE:3585400, mRNA, complete cds
Length = 2309
Score = 54.3 bits (129), Expect = 7e-06
Identities = 45/196 (22%), Positives = 81/196 (40%), Gaps = 18/196 (9%)
Frame = +1
Query: 7 FVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFG 66
F Q L A D E + K+ + + ++ + LL H+ D+ + ++
Sbjct: 217 FKSFQQELDARHDKYERLVKLSRDITVESKRTIFLL---HRITSAPDMEEILTESESKLD 387
Query: 67 TVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIE 126
V+ + + + E ++FH LQ V +F +++T +L++ E + + L
Sbjct: 388 GVRQKILQVAQELSGEDMHQFHRAVTTGLQEYVEAVSFQHFIKTRSLISMEEINKQLTFT 567
Query: 127 PD-------------REKGF-----HLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPL 168
+ +EK L DYL GV L EL R+ +NSV GD P
Sbjct: 568 AEDSGKESKTPPAEGQEKQLVTWRLKLTPVDYLLGVADLTGELMRMCINSVGNGDIDTPF 747
Query: 169 HISTFINELDSGFRLL 184
+S F+ ++ GF +
Sbjct: 748 EVSQFLRQVYDGFSFI 795
>gb|BC011797.1|BC011797 Homo sapiens, Similar to translin-associated factor X, clone
MGC:19629 IMAGE:4138517, mRNA, complete cds
Length = 1852
Score = 53.5 bits (127), Expect = 1e-05
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 18/196 (9%)
Frame = +2
Query: 7 FVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFG 66
F Q L A D E + K+ + + ++ + LL + +DI ++
Sbjct: 248 FKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDI---LTESEIKLD 418
Query: 67 TVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAV------- 119
V+ + + + E ++FH LQ V +F +++T +L++ + +
Sbjct: 419 GVRQKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFT 598
Query: 120 TEILGIE--------PDREKG---FHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPL 168
TE G E D++ G + DYL GV L EL R+ +NSV GD P
Sbjct: 599 TEDNGKENKTPSSDAQDKQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGNGDIDTPF 778
Query: 169 HISTFINELDSGFRLL 184
+S F+ ++ GF +
Sbjct: 779 EVSQFLRQVYDGFSFI 826
>ref|NM_005999.1| Homo sapiens translin-associated factor X (TSNAX), mRNA
Length = 2669
Score = 53.5 bits (127), Expect = 1e-05
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 18/196 (9%)
Frame = +2
Query: 7 FVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFG 66
F Q L A D E + K+ + + ++ + LL + +DI ++
Sbjct: 275 FKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDI---LTESEIKLD 445
Query: 67 TVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAV------- 119
V+ + + + E ++FH LQ V +F +++T +L++ + +
Sbjct: 446 GVRQKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFT 625
Query: 120 TEILGIE--------PDREKG---FHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPL 168
TE G E D++ G + DYL GV L EL R+ +NSV GD P
Sbjct: 626 TEDNGKENKTPSSDAQDKQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGNGDIDTPF 805
Query: 169 HISTFINELDSGFRLL 184
+S F+ ++ GF +
Sbjct: 806 EVSQFLRQVYDGFSFI 853
>emb|X95073.1|HSTRAXGEN H.sapiens mRNA for translin associated protein X
Length = 2669
Score = 53.5 bits (127), Expect = 1e-05
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 18/196 (9%)
Frame = +2
Query: 7 FVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFG 66
F Q L A D E + K+ + + ++ + LL + +DI ++
Sbjct: 275 FKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDI---LTESEIKLD 445
Query: 67 TVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAV------- 119
V+ + + + E ++FH LQ V +F +++T +L++ + +
Sbjct: 446 GVRQKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFT 625
Query: 120 TEILGIE--------PDREKG---FHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPL 168
TE G E D++ G + DYL GV L EL R+ +NSV GD P
Sbjct: 626 TEDNGKENKTPSSDAQDKQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGNGDIDTPF 805
Query: 169 HISTFINELDSGFRLL 184
+S F+ ++ GF +
Sbjct: 806 EVSQFLRQVYDGFSFI 853
>gb|BC010376.1|BC010376 Homo sapiens, translin-associated factor X, clone MGC:13527
IMAGE:4283594, mRNA, complete cds
Length = 1837
Score = 53.5 bits (127), Expect = 1e-05
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 18/196 (9%)
Frame = +3
Query: 7 FVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFG 66
F Q L A D E + K+ + + ++ + LL + +DI ++
Sbjct: 231 FKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDI---LTESEIKLD 401
Query: 67 TVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAV------- 119
V+ + + + E ++FH LQ V +F +++T +L++ + +
Sbjct: 402 GVRQKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFT 581
Query: 120 TEILGIE--------PDREKG---FHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPL 168
TE G E D++ G + DYL GV L EL R+ +NSV GD P
Sbjct: 582 TEDNGKENKTPSSDAQDKQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGNGDIDTPF 761
Query: 169 HISTFINELDSGFRLL 184
+S F+ ++ GF +
Sbjct: 762 EVSQFLRQVYDGFSFI 809
>gb|AC006922.6|AC006922 Arabidopsis thaliana chromosome II section 201 of 255 of the complete
sequence. Sequence from clones T1J8
Length = 114950
Score = 53.1 bits (126), Expect = 2e-05
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +2
Query: 150 ELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYD 196
E R VN VTAGDY P + F+ +L + FR+LNL+ND LRK++D
Sbjct: 107450 EQPRYVVNRVTAGDYDCPRKVMNFLTDLHAAFRMLNLRNDFLRKKFD 107590
>ref|NM_022262.1| Rattus norvegicus translin-associated factor X (Tsnax), mRNA
Length = 873
Score = 52.0 bits (123), Expect = 4e-05
Identities = 44/196 (22%), Positives = 77/196 (38%), Gaps = 18/196 (9%)
Frame = +1
Query: 7 FVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFG 66
F Q L D E + K+ + + ++ + LL H+ D+ + ++
Sbjct: 115 FKSFQQELDTRHDKYERLVKLSRDITVESKRTIFLL---HRITSAPDMEEILTESESKLD 285
Query: 67 TVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIE 126
V+ + + + E ++FH LQ V +F ++ T +L++ E + L
Sbjct: 286 GVRQKMLQVAQELSGEDMHQFHRAVTTGLQEYVEAVSFQHFIRTRSLISMEEINRQLTFT 465
Query: 127 PD----REKGFHLDVED--------------YLSGVLILASELSRLSVNSVTAGDYSRPL 168
D K D +D YL GV L EL R+ +NSV GD P
Sbjct: 466 TDDSGKESKAPPADGQDKQLVTWRLKITPVDYLLGVADLTGELMRMCINSVGNGDIDTPF 645
Query: 169 HISTFINELDSGFRLL 184
+S F+ ++ GF +
Sbjct: 646 EVSQFLRQVYDGFSFI 693
>gb|AF262357.1|AF262357 Rattus norvegicus trax mRNA, complete cds
Length = 1501
Score = 52.0 bits (123), Expect = 4e-05
Identities = 44/196 (22%), Positives = 77/196 (38%), Gaps = 18/196 (9%)
Frame = +2
Query: 7 FVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFG 66
F Q L D E + K+ + + ++ + LL H+ D+ + ++
Sbjct: 266 FKSFQQELDTRHDKYERLVKLSRDITVESKRTIFLL---HRITSAPDMEEILTESESKLD 436
Query: 67 TVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIE 126
V+ + + + E ++FH LQ V +F ++ T +L++ E + L
Sbjct: 437 GVRQKMLQVAQELSGEDMHQFHRAVTTGLQEYVEAVSFQHFIRTRSLISMEEINRQLTFT 616
Query: 127 PD----REKGFHLDVED--------------YLSGVLILASELSRLSVNSVTAGDYSRPL 168
D K D +D YL GV L EL R+ +NSV GD P
Sbjct: 617 TDDSGKESKAPPADGQDKQLVTWRLKITPVDYLLGVADLTGELMRMCINSVGNGDIDTPF 796
Query: 169 HISTFINELDSGFRLL 184
+S F+ ++ GF +
Sbjct: 797 EVSQFLRQVYDGFSFI 844
>emb|X95075.1|MMTRAPROM M.musculus mRNA for translin promoter
Length = 928
Score = 44.7 bits (104), Expect = 0.006
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 1 MSVSEIFVELQGFLAAEQDIRE 22
MSVSEIFVELQGFLAAEQDIRE
Sbjct: 672 MSVSEIFVELQGFLAAEQDIRE 737
>emb|X95076.1|HSTRAPROM H.sapiens mRNA for translin promoter
Length = 1002
Score = 44.7 bits (104), Expect = 0.006
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 1 MSVSEIFVELQGFLAAEQDIRE 22
MSVSEIFVELQGFLAAEQDIRE
Sbjct: 771 MSVSEIFVELQGFLAAEQDIRE 836
>dbj|AK011220.1|AK011220 Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:2600015M20:translin, full insert
sequence
Length = 503
Score = 44.7 bits (104), Expect = 0.006
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 1 MSVSEIFVELQGFLAAEQDIRE 22
MSVSEIFVELQGFLAAEQDIRE
Sbjct: 117 MSVSEIFVELQGFLAAEQDIRE 182
>gb|AF271269.1|AF271267S3 Homo sapiens translin-like protein (TRAX) gene, exons 4, 5, 6, and
complete cds
Length = 24360
Score = 41.6 bits (96), Expect = 0.048
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +3
Query: 139 DYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLL 184
DYL GV L EL R+ +NSV GD P +S F+ ++ GF +
Sbjct: 22272 DYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFI 22409
>emb|Z75272.1|SCYOR364W S.cerevisiae chromosome XV reading frame ORF YOR364w
Length = 2794
Score = 35.0 bits (79), Expect = 4.5
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -3
Query: 69 KTHLTSL-KTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTRE 117
KT L L K K +Y FH HW +LQ ++ A F++Y E L E
Sbjct: 1172 KTFLKVLQKFKVKTIRYLHFHTHWSALLQGTLYRAVFIIYSEISLLALWE 1023
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 12, 2002 2:19 AM
Number of letters in database: 566,364,212
Number of sequences in database: 1,171,752
Lambda K H
0.322 0.138 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 968,773,076
Number of Sequences: 1171752
Number of extensions: 12318435
Number of successful extensions: 46835
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 24608
Number of HSP's successfully gapped in prelim test: 2000
Number of HSP's that attempted gapping in prelim test: 19100
Number of HSP's gapped (non-prelim): 32852
length of query: 228
length of database: 1,620,443,836
effective HSP length: 130
effective length of query: 98
effective length of database: 1,468,116,076
effective search space: 143875375448
effective search space used: 143875375448
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)