TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(569 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,171,752 sequences; 566,364,212 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
ref|XM_002686.6| Homo sapiens interleukin 1 receptor, type ... 1167 0.0
ref|NM_000877.1| Homo sapiens interleukin 1 receptor, type ... 1167 0.0
emb|X16896.1|HSIL1RFT Human mRNA for interleukin-1 receptor... 1167 0.0
gb|M27492.1|HUMIL1RA Human interleukin 1 receptor mRNA, com... 1167 0.0
dbj|AB020338.1|AB020338 Equus caballus mRNA for interleukin... 927 0.0
ref|NM_008362.1| Mus musculus interleukin 1 receptor, type ... 823 0.0
gb|M20658.1|MUSIL1TCR Mouse interleukin-1 receptor mRNA, co... 823 0.0
gb|M95578.1|RATIL1R Rattus notvegicus Sprague-Dawley interl... 808 0.0
gb|M81846.1|CHKIL1REC Gallus gallus IL-1 receptor I mRNA, c... 446 e-123
ref|NM_013123.1| Rattus norvegicus Interleukin 1 receptor, ... 403 e-110
gb|U14010.1|RNU14010 Rattus norvegicus soluble IL-1 recepto... 403 e-110
gb|AF284433.1|AF284433 Mus musculus IL-1Rrp2 mRNA, complete... 391 e-106
ref|XM_002685.2| Homo sapiens interleukin 1 receptor-like 2... 385 e-105
gb|AF284434.1|AF284434 Homo sapiens IL-1Rrp2 mRNA, complete... 385 e-105
ref|NM_003854.1| Homo sapiens interleukin 1 receptor-like 2... 384 e-104
gb|U49065.1|HSU49065 Human interleukin-1 receptor-related p... 384 e-104
gb|U49066.1|RNU49066 Rattus norvegicus interleukin-1 recept... 376 e-102
gb|AC007271.3|AC007271 Homo sapiens BAC clone RP11-4B12 fro... 271 7e-76
gb|S70238.1|S70238 type I interleukin-1 receptor [rats, int... 271 2e-70
dbj|AB041738.2|AB041738 Gallus gallus mRNA for ST2L, comple... 249 7e-64
gb|U04317.1|RNU04317 Rattus norvegicus Fit-1M (Fit-1) mRNA,... 229 4e-58
dbj|D13695.1|MUSST2L Mus musculus mRNA for ST2L protein, co... 227 3e-57
dbj|AB012701.2|AB012701 Homo sapiens mRNA for ST2L, 5' nonc... 224 1e-56
ref|NM_016232.2| Homo sapiens interleukin 1 receptor-like 1... 224 1e-56
dbj|AB041739.2|AB041739 Gallus gallus mRNA for ST2LV, compl... 216 6e-54
dbj|AK026803.1|AK026803 Homo sapiens cDNA: FLJ23150 fis, cl... 214 1e-53
ref|NM_030688.1| Mus musculus interkeukin 1 receptor access... 213 5e-53
gb|AF284437.1|AF284437 Mus musculus TIGIRR-1 mRNA, complete... 213 5e-53
ref|NM_017416.1| Homo sapiens interleukin 1 receptor access... 212 7e-53
emb|AJ272208.1|HSA272208 Homo sapiens mRNA for IL-1 recepto... 212 7e-53
emb|AJ290436.1|HSA290436 Homo sapiens mRNA for IL1RAPL-2 re... 212 7e-53
gb|AF284436.1|AF284436 Homo sapiens TIGIRR-1 mRNA, complete... 212 7e-53
gb|AF212016.1|AF212016 Homo sapiens interleukin-1 receptor ... 212 7e-53
gb|AF181285.1|AF181285 Homo sapiens X-linked interleukin-1 ... 212 7e-53
ref|XM_034808.1| Homo sapiens interleukin 1 receptor access... 212 7e-53
gb|AF284435.1|AF284435 Homo sapiens TIGIRR-2 mRNA, complete... 194 1e-47
gb|AF181284.1|AF181284 Homo sapiens X-linked interleukin-1 ... 194 1e-47
ref|NM_014271.1| Homo sapiens interleukin 1 receptor access... 194 1e-47
emb|AJ243874.1|HSA243874 Homo sapiens mRNA for oligophrenin... 194 1e-47
ref|NM_003855.1| Homo sapiens interleukin 18 receptor 1 (IL... 190 4e-46
gb|U43672.1|HSU43672 Human putative transmembrane receptor ... 190 4e-46
ref|NM_008365.1| Mus musculus interleukin 18 receptor 1 (Il... 188 1e-45
gb|U43673.1|MMU43673 Mus musculus putative transmembrane re... 188 1e-45
gb|U48592.1|RNU48592 Rattus norvegicus interleukin-1 recept... 155 1e-35
ref|NM_012968.1| Rattus norvegicus Interleukin 1 receptor a... 155 1e-35
ref|NM_002182.1| Homo sapiens interleukin 1 receptor access... 154 3e-35
dbj|AB006537.1|AB006537 Homo sapiens mRNA for interleukin 1... 154 3e-35
gb|AF029213.1|AF029213 Homo sapiens IL-1 receptor accessory... 154 3e-35
ref|NM_008364.1| Mus musculus interleukin 1 receptor access... 152 6e-35
emb|X85999.1|MMIL1RACP M.musculus mRNA for interleukin 1 re... 152 6e-35
gb|AC007248.3|AC007248 Homo sapiens BAC clone RP11-315O22 f... 151 1e-34
ref|NM_003853.1| Homo sapiens interleukin 18 receptor acces... 136 6e-30
gb|AF077346.1|AF077346 Homo sapiens interleukin-18 receptor... 136 6e-30
gb|U64092.1|CGU64092 Cercopithecidae gen. sp. type II inter... 131 2e-28
gb|U64093.1|CGU64093 Cercopithecidae gen. sp. soluble type ... 125 1e-26
gb|U74649.1|HSU74649 Human interleukin-1 receptor type II m... 124 2e-26
gb|U64094.1|HSU64094 Human soluble type II interleukin-1 re... 124 2e-26
ref|NM_004633.1| Homo sapiens interleukin 1 receptor, type ... 124 2e-26
emb|X59770.1|HSIL1R2II H.sapiens IL-1R2 mRNA for type II in... 124 2e-26
emb|AJ277831.1|MMU277831 Mus musculus mRNA for IL1RAPL-2 re... 122 1e-25
ref|NM_010553.1| Mus musculus interleukin 18 receptor acces... 120 4e-25
gb|AF077347.1|AF077347 Mus musculus interleukin-18 receptor... 120 4e-25
dbj|AB033415.1|AB033415 Equus caballus IL-1RII mRNA for int... 112 1e-22
ref|XM_013114.2| Homo sapiens interleukin 1 receptor access... 107 4e-21
emb|X59769.1|MMIL1R2 Mouse Il-1r2 mRNA for type II interleu... 105 9e-21
ref|NM_010555.1| Mus musculus interleukin 1 receptor, type ... 105 9e-21
ref|NM_053953.1| Rattus norvegicus interleukin 1 receptor, ... 105 1e-20
emb|Z22812.1|RNINL1R2A R.norvegicus interleukin-1 receptor ... 105 1e-20
dbj|AB041748.1|AB041740S9 Gallus gallus gene for ST2L, ST2L... 103 6e-20
gb|M24843.1|MUST1A Mouse T1 protein mRNA, complete cds 102 1e-19
ref|NM_010743.1| Mus musculus interleukin 1 receptor-like 1... 102 1e-19
emb|Y07519.1|MMST2 Mouse ST2 gene 102 1e-19
gb|BC012346.1|BC012346 Homo sapiens, Similar to interleukin... 102 1e-19
ref|NM_013037.1| Rattus norvegicus Interleukin 1 receptor-l... 101 2e-19
gb|U04319.1|RNU04319 Rattus norvegicus Fit-1S (Fit-1) mRNA,... 101 2e-19
ref|NM_003856.1| Homo sapiens interleukin 1 receptor-like 1... 94 4e-17
dbj|D12763.1|HUMST2M Homo sapiens mRNA for ST2 protein 94 4e-17
gb|BC021159.1|BC021159 Mus musculus, Similar to interleukin... 83 6e-14
ref|XM_036436.4| Homo sapiens interleukin 1 receptor access... 83 8e-14
gb|AF167343.1|AF167343 Homo sapiens soluble interleukin-1 r... 83 8e-14
dbj|AB041737.2|AB041737 Gallus gallus mRNA for ST2, complet... 82 1e-13
gb|BC004628.1|BC004628 Mus musculus, clone IMAGE:3585952, mRNA 82 1e-13
emb|AJ276474.2|OMY276474 Oncorhynchus mykiss mRNA for inter... 78 2e-12
gb|BC016141.1|BC016141 Homo sapiens, interleukin 1 receptor... 76 8e-12
gb|BC012580.1|BC012580 Homo sapiens, Similar to interleukin... 70 5e-10
ref|NM_023059.1| Mus musculus single Ig IL-1 receptor relat... 69 1e-09
gb|AF113795.1|AF113795 Mus musculus toll/interleukin-1 rece... 69 1e-09
ref|NM_021805.1| Homo sapiens single Ig IL-1R-related molec... 69 2e-09
dbj|AK025099.1|AK025099 Homo sapiens cDNA: FLJ21446 fis, cl... 69 2e-09
gb|BC003591.1|BC003591 Homo sapiens, single Ig IL-1R-relate... 69 2e-09
dbj|AB041747.1|AB041740S8 Gallus gallus st2 gene, exon 11 68 3e-09
gb|AF380138.1|AF380138 Monkeypox virus strain Zaire-96-I-16... 65 1e-08
dbj|AB029084.1|AB029084 Homo sapiens ST2V mRNA, complete cds 65 1e-08
emb|X75603.1|PWFGFR3 P.waltlii mRNA for fibroblast growth f... 62 1e-07
gb|BC010806.1|BC010806 Mus musculus, Similar to single Ig I... 62 1e-07
gb|AF012825.1|AF012825 Ectromelia virus envelope glycoprote... 62 2e-07
emb|AJ277110.1|EVI277110 Ectromelia virus IL1RB for Interle... 61 3e-07
gb|M35027.1|VACCG Vaccinia virus, complete genome 61 3e-07
gb|U94848.1|U94848 Vaccinia virus strain Ankara, complete g... 60 6e-07
gb|AF239957.1|AF239957 Mus musculus single Ig IL-1R-related... 59 1e-06
emb|Y15035.1|CVY15035 Cowpox virus strain GRI-90 DNA (49 kb... 59 1e-06
ref|XM_053531.3| Homo sapiens fibulin 6 (FIBL-6), mRNA 59 2e-06
emb|Z81144.1|HSU129B7 Human DNA sequence from cosmid U129B7... 58 2e-06
emb|X56121.1|VVB15RG Vaccinia virus B15R gene for 36.5 kDa ... 58 2e-06
dbj|D01018.1|VACB15RW Vaccinia virus DNA for B15R protein, ... 58 2e-06
dbj|D11079.1|VACRHF Vaccinia virus genomic DNA, 42kbp from ... 58 2e-06
gb|AF095689.1|AF095689 Vaccinia virus (strain Tian Tan) com... 58 3e-06
gb|M95202.1|PXRIL1XX Poxvirus interleukin-1 binding protein... 57 4e-06
gb|AF325528.1|AF325528 Lumpy skin disease virus isolate Nee... 57 4e-06
gb|AF156100.1|AF156100 Homo sapiens hemicentin mRNA, comple... 57 6e-06
dbj|AK056557.1|AK056557 Homo sapiens cDNA FLJ31995 fis, clo... 54 3e-05
emb|X90569.1|HSTITINN2 H.sapiens mRNA for titin protein (cl... 54 5e-05
ref|NM_005010.1| Homo sapiens neuronal cell adhesion molecu... 53 9e-05
dbj|AB002341.1|AB002341 Human mRNA for KIAA0343 gene, compl... 53 9e-05
dbj|AK056544.1|AK056544 Homo sapiens cDNA FLJ31982 fis, clo... 53 9e-05
emb|X57205.1|HSFGFR4 Human FGFR-4 mRNA for fibroblast growt... 53 9e-05
ref|XM_027222.2| Homo sapiens neuronal cell adhesion molecu... 53 9e-05
ref|NM_008011.1| Mus musculus fibroblast growth factor rece... 53 9e-05
emb|AJ001057.1|HSC7NRCAM Homo sapiens mRNA for NrCAM protein 53 9e-05
emb|X59927.1|MMFGFR4M M.musculus mRNA for fibroblast growth... 53 9e-05
gb|AC084594.1|CBRG42E21 Caenorhabditis briggsae cosmid G42E... 52 1e-04
gb|AF303661.1|AF303661 Halocynthia roretzi FGF receptor (FG... 52 1e-04
gb|BC011847.1|BC011847 Homo sapiens, fibroblast growth fact... 52 2e-04
gb|L03840.1|HUMFGFR4X Human fibroblast growth factor recept... 52 2e-04
gb|AF381545.1|AF381545 Homo sapiens membrane glycoprotein L... 52 2e-04
ref|NM_022963.1| Homo sapiens fibroblast growth factor rece... 52 2e-04
ref|XM_033712.3| Homo sapiens ortholog of mouse integral me... 52 2e-04
ref|NM_002011.2| Homo sapiens fibroblast growth factor rece... 52 2e-04
dbj|AB050468.1|AB050468 Homo sapiens mRNA for membrane glyc... 52 2e-04
emb|AL117666.1|HSM801204 Homo sapiens mRNA; cDNA DKFZp586O1... 52 2e-04
gb|U55258.1|HSU55258 Human hBRAVO/Nr-CAM precursor (hBRAVO/... 51 3e-04
ref|XM_078921.1| BcDNA:GH11322, mRNA 51 3e-04
gb|U10986.1|XLU10986 Xenopus laevis deleted in colorectal c... 51 3e-04
ref|NM_072181.1| titin 51 3e-04
gb|U80022.2| Caenorhabditis elegans cosmid F12F3, complete ... 51 3e-04
gb|AF181644.1|AF181644 Drosophila melanogaster BcDNA.GH1132... 51 3e-04
gb|AC007278.3|AC007278 Homo sapiens BAC clone RP11-308G20 f... 51 3e-04
gb|U33058.1|CEU33058 Caenorhabditis elegans UNC-89 (unc-89)... 50 5e-04
ref|NM_011248.1| Mus musculus retinoblastoma inhibiting gen... 50 6e-04
gb|AF060570.1|AF060570 Mus musculus rig-1 protein mRNA, com... 50 6e-04
ref|NM_017358.1| Rattus norvegicus immunoglobulin superfami... 50 8e-04
gb|AF004840.1|AF004840 Rattus norvegicus CDO (cdo) mRNA, co... 50 8e-04
gb|M24637.1|CHKCEK1 Chicken tyrosine kinase (cek1) mRNA, co... 49 0.001
gb|AF202063.1|AF202063 Homo sapiens fibroblast growth facto... 49 0.001
emb|Z68328.1|HSU72E5 Human DNA sequence from cosmid cU72E5,... 49 0.001
emb|X60184.1|MMST2G Mouse ST2 gene for growth-associated pr... 49 0.001
ref|NM_013225.1| Rattus norvegicus contactin 6 (Cntn6), mRNA 49 0.001
dbj|D87248.1|D87248 Rattus norvegicus mRNA for NB-3, comple... 49 0.001
gb|M35195.1|CHKCEK2 Chicken tyrosine kinase (cek2) mRNA, co... 49 0.001
gb|AF176552.1|AF176552 Mus musculus fibroblast growth facto... 49 0.002
gb|S78201.1|S78201 Sheeppox virus strain KS-1 Q2/1L (Q2/1L)... 49 0.002
dbj|AB018299.1|AB018299 Homo sapiens mRNA for KIAA0756 prot... 49 0.002
emb|X65059.1|PWFGFR4 P.waltlii mRNA for fibroblast growth f... 49 0.002
gb|U81037.1|RNU81037 Rattus norvegicus ankyrin binding cell... 49 0.002
gb|AF336128.1|AF336128S1 Lumpy skin disease virus strain Ne... 49 0.002
gb|AF157560.1|AF157560 Danio rerio fibroblast growth factor... 48 0.002
ref|NM_058889.1| immunoglobin-like protein 48 0.002
gb|AF003131.1| Caenorhabditis elegans cosmid C09D1, complet... 48 0.002
gb|AC008182.2|AC008182 Drosophila melanogaster, chromosome ... 48 0.003
gb|AE003623.1|AE003623 Drosophila melanogaster genomic scaf... 48 0.003
gb|AC087076.1|AC087076 Caenorhabditis briggsae cosmid CB032... 48 0.003
ref|XM_078936.1| Toll-4, mRNA 48 0.003
gb|AF247768.1|AF247768 Drosophila melanogaster Toll-4 mRNA,... 48 0.003
ref|NM_077234.1| IG (immunoglobulin) superfamily (47 domains) 48 0.003
gb|AC009197.8| Drosophila melanogaster, chromosome 2L, regi... 48 0.003
gb|AF074901.1|AF074901 Caenorhabditis elegans hemicentin pr... 48 0.003
gb|AY061639.1| Rattus norvegicus neurofascin 155 kDa isofor... 48 0.003
ref|NM_077235.1| Ig superfamily repeats (I-type) 48 0.003
emb|Z47068.1|CEF15G9 Caenorhabditis elegans cosmid F15G9, c... 47 0.004
dbj|AB056375.1|AB056375 Macaca fascicularis brain cDNA, clo... 47 0.004
dbj|AB055861.1|AB055861 Procambarus clarkii I-con mRNA for ... 47 0.004
ref|NM_008377.1| Mus musculus integral membrane glycoprotei... 47 0.005
dbj|D78572.1|D78572 Mus musculus mRNA for membrane glycopro... 47 0.005
gb|AF410153.1| Swinepox virus isolate 17077-99, complete ge... 47 0.005
gb|L19870.1|NVIKGFR Notophthalmus viridescens keratinocyte ... 47 0.005
emb|Y14852.1|OCY14852 Oryctolagus cuniculus mRNA for tintin... 47 0.007
gb|AF024638.1|AF024638 Mus musculus fibroblast growth facto... 47 0.007
emb|AL031575.1|HS127F18 Human DNA sequence from clone 127F1... 47 0.007
ref|NM_008779.1| Mus musculus contactin 3 (Cntn3), mRNA 47 0.007
gb|L01991.1|MUSNGP Mus musculus TAFG-1-like neuronal glycop... 47 0.007
ref|XM_093169.1| Homo sapiens similar to dA127F18.1 (PUTATI... 47 0.007
gb|U81035.1|RNU81035 Rattus norvegicus ankyrin binding cell... 47 0.007
ref|XM_080991.1| off-track, mRNA 46 0.009
ref|NM_078981.1| Drosophila melanogaster off-track (otk), mRNA 46 0.009
emb|X63453.1|DMDTRK D.melanogaster mRNA for gp160-Dtrk 46 0.009
ref|XM_070947.1| Homo sapiens hypothetical gene LOC138524 (... 46 0.009
emb|Y00051.1|MMNCAMR Mouse mRNA for neural cell adhesion mo... 46 0.009
gb|AC007165.3|AC007165 Homo sapiens BAC clone RP11-451C2, c... 46 0.009
ref|NM_010875.1| Mus musculus neural cell adhesion molecule... 46 0.009
gb|AF444783.1|AF444783 Anopheles gambiae Trex gene, complet... 46 0.011
dbj|AB007035.1|AB007035 Xenopus laevis mRNA for FGF recepto... 46 0.011
gb|U22324.1|MMU22324 Mus musculus fibroblast growth factor ... 46 0.011
ref|XM_090120.1| Homo sapiens similar to unnamed protein pr... 46 0.011
gb|L19869.1|NVI2FGFR Notophthalmus viridescens fibroblast g... 46 0.011
gb|U23445.1|MMU23445 Mus musculus fibroblast growth factor ... 46 0.011
gb|M63889.1|HUMHBGFC Human heparin-binding growth factor re... 45 0.015
ref|XM_078938.1| echinoid, mRNA 45 0.015
emb|X74332.1|PWFGFR2 P.waltl mRNA for fibroblast growth fac... 45 0.015
ref|NM_023109.1| Homo sapiens fibroblast growth factor rece... 45 0.015
gb|M63887.1|HUMHBGFA Human heparin-binding growth factor re... 45 0.015
emb|X61992.1|GGBEK G.gallus mRNA bek for receptor tyrosine ... 45 0.015
gb|M63888.1|HUMHBGFBV Human heparin-binding growth factor r... 45 0.015
ref|NM_078745.1| Drosophila melanogaster echinoid (ed), mRNA 45 0.015
gb|AF275903.1|AF275903 Drosophila melanogaster echinoid (ed... 45 0.015
ref|NM_024146.1| Rattus norvegicus FGF receptor-1 (Fgfr1), ... 45 0.019
dbj|D12498.1|RATFGFR1 Rat mRNA for FGF receptor-1, complete... 45 0.019
ref|NM_019329.1| Rattus norvegicus Plasmacytoma-associated ... 45 0.019
gb|U11031.1|RNU11031 Rattus norvegicus neural cell adhesion... 45 0.019
gb|M34641.1|HUMFGF1A Human fibroblast growth factor (FGF) r... 45 0.019
dbj|D16541.1|CHKCONNE Gallus gallus gene for connectin, par... 45 0.025
ref|XM_049776.3| Homo sapiens Down syndrome cell adhesion m... 45 0.025
gb|AF217525.1|AF217525 Homo sapiens clone cDSC1 Down syndro... 45 0.025
ref|NM_057118.1| Rattus norvegicus contactin 1 (Cntn1), mRNA 45 0.025
dbj|D38492.1|RATF3A Rat mRNA for neural adhesion molecule F... 45 0.025
gb|AF023449.1|AF023449 Homo sapiens CHD2-42 Down syndrome c... 45 0.025
ref|NM_001389.1| Homo sapiens Down syndrome cell adhesion m... 45 0.025
gb|AF023450.1|AF023450 Homo sapiens CHD2-52 Down syndrome c... 45 0.025
emb|X15049.1|MMNCAMRI Mouse common mRNA of NCAM isoforms 45 0.025
ref|NM_031521.1| Rattus norvegicus Cell adhesion molecule, ... 45 0.025
emb|X06564.1|RNNCAM14 Rat mRNA for 140-kD NCAM polypeptide 45 0.025
ref|XM_056455.1| Homo sapiens Melanoma associated gene (D2S... 45 0.025
gb|AF289030.1|AF289030 Homo sapiens Down syndrome cell adhe... 45 0.025
gb|S54008.1|S54008 fibroblast growth factor receptor 1 beta... 44 0.032
emb|X57119.1|HSFGR2IGA Human mRNA for fibroblast growth rec... 44 0.032
emb|X51803.1|HSFGFR Human mRNA for fibroblast growth factor... 44 0.032
emb|X51893.1|MMFGF Mouse fms-like gene (mflg) mRNA for fibr... 44 0.032
emb|X57120.1|HSFGR3IG Human mRNA for fibroblast growth rece... 44 0.032
ref|XM_049463.1| Homo sapiens fibroblast growth factor rece... 44 0.032
ref|XM_047536.2| Homo sapiens obscurin, cytoskeletal calmod... 44 0.032
ref|NM_023029.1| Homo sapiens fibroblast growth factor rece... 44 0.032
ref|NM_022973.1| Homo sapiens fibroblast growth factor rece... 44 0.032
gb|M87770.1|HUMKSAMI Human fibroblast growth factor recepto... 44 0.032
gb|M34185.1|HUMFGF2H Human fibroblast growth factor recepto... 44 0.032
emb|AJ002535.1|HSAJ2535 Homo sapiens mRNA for obscurin (OBS... 44 0.032
emb|X57121.1|HSFGR3IGA Human mRNA for fibroblast growth rec... 44 0.032
emb|X52832.1|HSFGFRBE Human bek mRNA for fibroblast growth ... 44 0.032
emb|X66945.1|HSNSAMTK H.sapiens N-sam mRNA for fibroblast g... 44 0.032
gb|M37722.1|HUMBFGFS Human shorter form basic fibroblast gr... 44 0.032
ref|NM_000604.2| Homo sapiens fibroblast growth factor rece... 44 0.032
emb|X52833.1|HSFGFRFL Human flg mRNA for fibroblast growth ... 44 0.032
ref|NM_000141.2| Homo sapiens fibroblast growth factor rece... 44 0.032
ref|NM_023105.1| Homo sapiens fibroblast growth factor rece... 44 0.032
ref|NM_023111.1| Homo sapiens fibroblast growth factor rece... 44 0.032
emb|X57122.1|HSFGR2IG Human mRNA for fibroblast growth rece... 44 0.032
ref|NM_023106.1| Homo sapiens fibroblast growth factor rece... 44 0.032
emb|Z69640.1|HSFGFR2UB H.sapiens fgfr2 gene (exon 5) 44 0.032
emb|Z69641.1|HSFGFR2UA H.sapiens fgfr2 gene 44 0.032
emb|Z71929.1|HSFGFR2MR H.sapiens FGFR2 mRNA 44 0.032
ref|NM_021339.1| Mus musculus cell adhesion molecule-relate... 44 0.032
ref|NM_015850.2| Homo sapiens fibroblast growth factor rece... 44 0.032
gb|AF090866.1|AF090866 Mus musculus CDO (Cdo) mRNA, complet... 44 0.032
gb|M60485.1|HUMFGFAA Human fibroblast growth factor recepto... 44 0.032
ref|NM_017383.1| Mus musculus contactin 6 (Cntn6), mRNA 44 0.042
dbj|AB032602.1|AB032602 Mus musculus mNB-3 mRNA for neural ... 44 0.042
gb|U07819.1|HSU07819 Human contactin 1 precursor (CNTN1) mR... 44 0.042
emb|Y00813.1|GGCONTAC Chicken mRNA for contactin 44 0.042
ref|NM_008988.1| Mus musculus putative neuronal cell adhesi... 44 0.042
gb|AF026465.1|AF026465 Mus musculus putative neuronal cell ... 44 0.042
emb|X14877.1|GGF11 Gallus gallus mRNA for neural cell recog... 44 0.042
gb|U92814.1|HMU92814 Hirudo medicinalis leechCAM mRNA, comp... 44 0.042
gb|BC011310.1|BC011310 Mus musculus, clone MGC:12077 IMAGE:... 44 0.042
gb|AF359246.1|AF359246 Homo sapiens fibroblast growth facto... 44 0.042
ref|NM_007727.1| Mus musculus contactin 1 (Cntn1), mRNA 44 0.042
emb|X14943.1|MMF3 Mouse mRNA for neuronal cell surface prot... 44 0.042
ref|NM_053429.1| Rattus norvegicus fibroblast growth factor... 44 0.042
gb|AF277717.1|AF277717 Rattus norvegicus fibroblast growth ... 44 0.042
ref|NM_001843.1| Homo sapiens contactin 1 (CNTN1), mRNA 44 0.042
emb|Z21488.1|HSCNTCTNA H.sapiens contactin mRNA, 44 0.042
gb|U07820.1|HSU07820 Human contactin 2 precursor (CNTN1) mR... 44 0.042
gb|S56291.1|S56291 sam3=FGFR3 homolog [mice, brain, mRNA, 2... 44 0.055
emb|X76885.1|CCFREK C.cortunix FREK mRNA for fibroblast gro... 44 0.055
gb|M81342.1|MUSMFR3 BALB/c fibroblast growth factor recepto... 44 0.055
gb|AF260530.1|AF260530 Drosophila melanogaster Dscam gene, ... 44 0.055
ref|NM_078925.1| Drosophila melanogaster Down syndrome cell... 44 0.055
dbj|AB059430.1|AB059430 Bos taurus fgfr3 mRNA for fibroblas... 44 0.055
gb|AF317839.1| Mus musculus immunoglobulin superfamily memb... 44 0.055
ref|NM_014461.1| Homo sapiens contactin 6 (CNTN6), mRNA 44 0.055
dbj|AB003592.1|AB003592 Homo sapiens mRNA for neural adhesi... 44 0.055
dbj|AB040929.1|AB040929 Homo sapiens mRNA for KIAA1496 prot... 44 0.055
gb|M35196.1|CHKCEK3 Chicken tyrosine kinase (cek3) mRNA, co... 44 0.055
emb|X65224.1|GGNEUFASC G.gallus mRNA for neurofascin 44 0.055
ref|NM_033608.1| Mus musculus neural cell adhesion molecule... 44 0.055
dbj|D31761.1|XELFGFR4 Xenopus laevis mRNA for fibroblast gr... 44 0.055
gb|AF245114.1|AF245114 Homo sapiens fibroblast growth facto... 43 0.072
dbj|D86983.1|D86983 Human mRNA for KIAA0230 gene, partial cds 43 0.072
ref|NM_072185.1| Caenorhabditis elegans 43 0.072
gb|M58051.1|HUMFGFR3 Human fibroblast growth factor recepto... 43 0.072
gb|L25393.1|SCATOLLD Schistocerca americana Toll protein, p... 43 0.072
gb|AF200348.1|AF200348 Homo sapiens melanoma-associated ant... 43 0.072
ref|XM_044120.2| Homo sapiens fibroblast growth factor rece... 43 0.072
gb|AC009739.3|AC009739 Drosophila melanogaster, chromosome ... 43 0.072
dbj|AB007036.1|AB007036 Xenopus laevis mRNA for FGF recepto... 43 0.072
ref|NM_031174.1| Mus musculus Down syndrome cell adhesion m... 43 0.072
gb|AC024760.1| Caenorhabditis elegans cosmid Y38B5A, comple... 43 0.072
gb|AF315558.1|AF315558 Mus musculus Down syndrome cell adhe... 43 0.072
gb|AF067951.2|AF067951 Caenorhabditis elegans cosmid H05O09... 43 0.072
gb|AE003841.2|AE003841 Drosophila melanogaster genomic scaf... 43 0.072
gb|AF167342.1|F167333S10 Homo sapiens membrane interleukin ... 43 0.072
gb|M91599.1|RATFGR4A Rat fibroblast growth factor receptor ... 43 0.072
gb|AF334385.1|AF334385 Rattus norvegicus Down syndrome cell... 43 0.072
ref|NM_022965.1| Homo sapiens fibroblast growth factor rece... 43 0.072
gb|AY005483.1| Mus musculus Down syndrome cell adhesion mol... 43 0.072
ref|NM_000142.2| Homo sapiens fibroblast growth factor rece... 43 0.072
emb|X59380.1|PWFGFR P.waltlii mRNA for fibroblast growth fa... 43 0.094
dbj|D13225.1|CHKCKITP Chicken mRNA for c-kit protein, compl... 43 0.094
gb|L08960.1|CHKBRVO Chicken cell adhesion molecule (Bravo) ... 43 0.094
emb|X58482.1|GGNRCAM Chicken mRNA for neuronal transmembran... 43 0.094
gb|M34186.1|HUMFGF3H Human fibroblast growth factor recepto... 43 0.094
gb|M77165.1|DROFAS2A D.melanogaster fasciclin II (Fas2) mRN... 42 0.12
dbj|AB056413.1|AB056413 Macaca fascicularis brain cDNA, clo... 42 0.12
gb|AY075340.1| Drosophila melanogaster GH14667 full length ... 42 0.12
gb|AC007579.4|AC007579 Drosophila melanogaster, chromosome ... 42 0.12
gb|AE003808.2|AE003808 Drosophila melanogaster genomic scaf... 42 0.12
gb|AC004516.1|AC004516 Drosophila melanogaster DNA sequence... 42 0.12
gb|AF368288.1|AF368288 Bos taurus fibroblast growth factor ... 42 0.12
gb|M34188.1|HUMFGF5H Human fibroblast growth factor recepto... 42 0.12
ref|NM_080327.1| Drosophila melanogaster Fasciclin 2 (Fas2)... 42 0.12
gb|M77166.1|DROFAS2B D.melanogaster fasciclin II (Fas2) mRN... 42 0.12
ref|XM_080773.1| similar to Stretchin-Mlck, mRNA 42 0.12
gb|AF257308.1|AF257308 Drosophila melanogaster clone GH2779... 42 0.12
gb|M34187.1|HUMFGF4H Human fibroblast growth factor recepto... 42 0.12
ref|NM_023107.1| Homo sapiens fibroblast growth factor rece... 42 0.12
gb|M64347.1|HUMFGFLR Human novel growth factor receptor mRN... 42 0.12
ref|NM_023108.1| Homo sapiens fibroblast growth factor rece... 42 0.12
gb|U58466.1|RNU58466 Rattus norvegicus fibroblast growth fa... 42 0.12
ref|NM_023031.1| Homo sapiens fibroblast growth factor rece... 42 0.16
ref|NM_023028.1| Homo sapiens fibroblast growth factor rece... 42 0.16
ref|NM_023030.1| Homo sapiens fibroblast growth factor rece... 42 0.16
gb|U11814.1|HSU11814 Human soluble keratinocyte growth fact... 42 0.16
dbj|AB030078.1|AB030078 Homo sapiens mRNA for K-sam-IIO3, c... 42 0.16
dbj|AB030077.1|AB030077 Homo sapiens mRNA for K-sam-IIO2, c... 42 0.16
ref|NM_022969.1| Homo sapiens fibroblast growth factor rece... 42 0.16
gb|AE003536.2|AE003536 Drosophila melanogaster genomic scaf... 42 0.16
ref|NM_008010.1| Mus musculus fibroblast growth factor rece... 42 0.16
ref|NM_022972.1| Homo sapiens fibroblast growth factor rece... 42 0.16
dbj|AB030075.1|AB030075 Homo sapiens mRNA for K-sam-IIH3, c... 42 0.16
emb|X58255.1|HSFGL2 Mus musculus mRNA for fibroblast growth... 42 0.16
gb|AC010573.3| Drosophila melanogaster 3L BAC RPCI98-2M13 (... 42 0.16
ref|NM_022974.1| Homo sapiens fibroblast growth factor rece... 42 0.16
gb|M97193.1|HUMFGFR2A Homo sapiens fibroblast growth factor... 42 0.16
dbj|AB030074.1|AB030074 Homo sapiens mRNA for K-sam-IIH2, p... 42 0.16
emb|X56191.1|HSBFR Human bfr mRNA for fibroblast growth fac... 42 0.16
gb|M55163.1|XELX1FGFR Xenopus laevis fibroblast growth fact... 42 0.16
dbj|AB030073.1|AB030073 Homo sapiens mRNA for K-sam-IIH1, c... 42 0.16
dbj|AK026508.1|AK026508 Homo sapiens cDNA: FLJ22855 fis, cl... 42 0.16
gb|M55614.1|HUMTK14 Human fibroblast growth factor receptor... 42 0.16
gb|AC104703.1| Drosophila melanogaster 3L BAC RP98-35M1 (Ro... 42 0.16
ref|NM_022975.1| Homo sapiens fibroblast growth factor rece... 42 0.16
gb|M80634.1|HUMKGFRA Human keratinocyte growth factor recep... 42 0.16
ref|NM_022976.1| Homo sapiens fibroblast growth factor rece... 42 0.16
dbj|AB030076.1|AB030076 Homo sapiens mRNA for K-sam-IIO1, c... 42 0.16
gb|M35718.1|HUMKSAMAA Human heparin-binding growth factor r... 42 0.16
gb|AF064799.1|AF064799 Danio rerio transiently expressed ax... 42 0.21
gb|M63503.1|MUSKGFR Mouse keratinocyte growth factor recept... 42 0.21
gb|L19108.1|RATHBFGFRE Rat (clone R2(BO3B)) heparin-binding... 42 0.21
gb|L19107.1|RATHBFGFRD Rat (clone R2(B3B)) heparin-binding ... 42 0.21
gb|L19104.1|RATHBFGFRA Rat (clone R2(A3B)) heparin-binding ... 42 0.21
gb|AF294649.1|AF294649 Rattus norvegicus FGFR2 K-SAM/IIIb m... 42 0.21
ref|NM_010206.1| Mus musculus fibroblast growth factor rece... 41 0.27
gb|M28998.1|MUSBFGFR Mouse basic fibroblast growth factor r... 41 0.27
gb|U50719.1|MSU50719 Manduca sexta neuroglian mRNA, complet... 41 0.27
gb|M65053.1|MUSFGFBC Mouse fibroblast growth factor mRNA, c... 41 0.27
emb|X16451.1|BTADCYC Bovine mRNA for calmoduline-independen... 41 0.27
ref|NM_009845.1| Mus musculus CD22 antigen (Cd22), mRNA 41 0.36
gb|L16928.1|MUSCD22A Mus musculus differentiation antigen (... 41 0.36
ref|NM_053029.1| Homo sapiens myosin, light polypeptide kin... 41 0.36
gb|AY017369.1| Homo sapiens NEPH1 (NEPH1) mRNA, complete cds 41 0.36
gb|AF069602.1|AF069602 Homo sapiens myosin light chain kina... 41 0.36
gb|AF461119.1|AF461119 Xenopus laevis roundabout-1 (robo1) ... 41 0.36
ref|XM_046808.4| Homo sapiens KIAA0756 protein (KIAA0756), ... 41 0.36
gb|AF389400.1|AF389400 Danio rerio fibroblast growth factor... 41 0.36
emb|AJ306906.1|HSA306906 Homo sapiens partial mRNA for fibu... 41 0.36
ref|NM_018240.1| Homo sapiens kin of IRRE like (Drosophila)... 41 0.36
dbj|AK001707.1|AK001707 Homo sapiens cDNA FLJ10845 fis, clo... 41 0.36
ref|NM_053027.1| Homo sapiens myosin, light polypeptide kin... 41 0.36
ref|NM_053025.1| Homo sapiens myosin, light polypeptide kin... 41 0.36
gb|U48959.2|HSU48959 Homo sapiens myosin light chain kinase... 41 0.36
gb|AF211257.1|AF211257 Canis familiaris fibroblast growth f... 40 0.47
ref|XM_041415.1| Homo sapiens neural cell adhesion molecule... 40 0.47
gb|M33760.1|MUSFGFR Mouse FGF receptor mRNA, complete cds 40 0.47
ref|NM_017345.1| Rattus norvegicus neural cell adhesion mol... 40 0.47
ref|NM_000615.1| Homo sapiens neural cell adhesion molecule... 40 0.47
gb|AF288453.1|AF288453 Xenopus laevis fibroblast growth fac... 40 0.47
gb|AF102134.1|AF102134 Mus musculus B lymphocyte cell adhes... 40 0.47
gb|S71824.1|S71824 N-CAM=145 kda neural cell adhesion molec... 40 0.47
emb|X59149.1|RNNCAML1 Rat mRNA for neural cell adhesion mol... 40 0.47
dbj|AK057509.1|AK057509 Homo sapiens cDNA FLJ32947 fis, clo... 40 0.47
emb|X16841.1|HSNCAME Human mRNA for a nontransmembrane isof... 40 0.47
dbj|AB007037.1|AB007037 Xenopus laevis mRNA for FGF recepto... 40 0.47
ref|XM_081958.1| Poly-glutamine tract binding protein 1, mRNA 40 0.47
ref|XM_052054.4| Homo sapiens Downs syndrome cell adhesion ... 40 0.61
gb|AE003823.2|AE003823 Drosophila melanogaster genomic scaf... 40 0.61
emb|X57746.1|DMFGFR D.melanogaster FGF-R gene for fibroblas... 40 0.61
ref|XM_079233.1| Leukocyte-antigen-related-like, mRNA 40 0.61
ref|NM_078880.1| Drosophila melanogaster Leukocyte-antigen-... 40 0.61
gb|M27700.1|DROLARM D.melanogaster protein tyrosine phospha... 40 0.61
gb|U81036.1|RNU81036 Rattus norvegicus ankyrin binding cell... 40 0.61
gb|AC007475.7|AC007475 Drosophila melanogaster, chromosome ... 40 0.61
dbj|AB028984.1|AB028984 Homo sapiens mRNA for KIAA1061 prot... 40 0.61
gb|L11002.1|RATANKBIND Rat ankyrin binding glycoprotein-1 r... 40 0.61
gb|AF334384.1|AF334384 Homo sapiens Down syndrome cell adhe... 40 0.61
dbj|AB032958.1|AB032958 Homo sapiens mRNA for KIAA1132 prot... 40 0.61
ref|XM_048786.3| Homo sapiens KIAA1061 protein (KIAA1061), ... 40 0.61
gb|AC007474.5|AC007474 Drosophila melanogaster, chromosome ... 40 0.61
gb|AC084686.1|CBRMM39H11 Caenorhabditis briggsae cosmid MM3... 33 0.68
gb|L11311.1|FSCTRKA Torpedo californica receptor tyrosine k... 40 0.80
gb|U24491.1|XLU24491 Xenopus laevis fibroblast growth facto... 40 0.80
emb|X15423.1|CEUNC22 Caenorhabditis elegans unc-22 gene for... 40 0.80
gb|L10351.1|CELTWIMUSC Caenorhabditis elegans gene, exons 1... 40 0.80
emb|X57790.1|MMFGFRLA M.musculus fibroblast growth factor r... 40 0.80
emb|Z73897.1|CEZK617 Caenorhabditis elegans cosmid ZK617, c... 40 0.80
gb|AF184968.1|AF184968 Oryctolagus cuniculus fibroblast gro... 39 1.0
emb|Z94718.1|GGLAMPG9 G.gallus mRNA for chLAMP, g9-isoform 39 1.0
gb|BC013867.1|BC013867 Homo sapiens, Similar to palladin, c... 39 1.0
gb|AC084684.1|CBRMM06C2 Caenorhabditis briggsae cosmid MM06... 39 1.0
ref|NM_016081.1| Homo sapiens palladin (KIAA0992), mRNA 39 1.0
gb|AF077041.1|AF077041 Homo sapiens SIH002 mRNA, complete cds 39 1.0
gb|AF151909.1|AF151909 Homo sapiens CGI-151 protein mRNA, c... 39 1.0
dbj|AK000845.1|AK000845 Homo sapiens cDNA FLJ20838 fis, clo... 39 1.0
dbj|D32135.1|BOVF3F11C Bovine mRNA for F3/F11/contactin, co... 39 1.0
gb|L19105.1|RATHBFGFRB Rat (clone R2(A3C)) heparin-binding ... 39 1.0
dbj|AK025843.1|AK025843 Homo sapiens cDNA: FLJ22190 fis, cl... 39 1.0
gb|M62322.1|XELXFGFRA2 Xenopus laevis fibroblast growth fac... 39 1.0
gb|AF464873.1| Homo sapiens myoneurin (MYN) mRNA, complete cds 39 1.0
emb|Z94720.1|GGLAMPG19 G.gallus mRNA for chLAMP, g19-isoform 39 1.0
emb|Z94719.1|GGLAMPG11 G.gallus mRNA for chLAMP, g11-isoform 39 1.0
gb|AY029401.1| Danio rerio cell adhesion molecule PCAM mRNA... 39 1.0
gb|L19112.1|RATHBFGFRI Rat (clone R2(B3C)) heparin-binding ... 39 1.0
dbj|AB041742.1|AB041740S3 Gallus gallus st2 gene, exon 3, 4, 5 39 1.0
ref|XM_037813.4| Homo sapiens palladin (KIAA0992), mRNA 39 1.0
gb|L19111.1|RATHBFGFRH Rat (clone R2(BO3C)) heparin-binding... 39 1.0
gb|AF167341.1|F167333S09 Homo sapiens membrane interleukin ... 39 1.0
ref|XM_012022.4| Homo sapiens neurotrimin (HNT), mRNA 39 1.0
ref|NM_072787.1| peroxidase 39 1.0
ref|NM_016522.1| Homo sapiens neurotrimin (HNT), mRNA 39 1.0
gb|AF126426.1|AF126426 Homo sapiens neurotrimin (HNT) mRNA,... 39 1.0
emb|Y08171.1|GGE19SPRO Gallus gallus mRNA for E19S protein 39 1.0
dbj|AB023209.1|AB023209 Homo sapiens mRNA for KIAA0992 prot... 39 1.0
gb|AF294650.1|AF294650 Rattus norvegicus FGFR2 BEK/IIIc mRN... 39 1.0
gb|AC091227.2| Drosophila melanogaster 3L BAC RP98-17F24 (R... 39 1.4
emb|Y00665.1|HSFLGMR Human flg (fms-like gene) mRNA for put... 39 1.4
gb|AE003531.2|AE003531 Drosophila melanogaster genomic scaf... 39 1.4
gb|AF388035.1|AF388035 Xenopus laevis membrane protein CDO ... 39 1.4
gb|U88578.1|DMU88578 Drosophila melanogaster sdk mRNA, comp... 39 1.4
gb|AF204158.1|AF204158 Drosophila melanogaster cell surface... 39 1.4
ref|NM_057941.1| Drosophila melanogaster sidekick (sdk), tr... 39 1.4
emb|Y17793.1|MMU17793 Mus musculus mRNA for Dutt1 protein 39 1.4
ref|NM_057942.1| Drosophila melanogaster sidekick (sdk), tr... 39 1.4
gb|AF247764.1|AF247764 Drosophila melanogaster Toll-8 mRNA,... 39 1.4
emb|X74031.1|DMDFR2 D.melanogaster DFR2 gene for FGF-recept... 39 1.4
emb|X69198.1|VVCGAA Variola virus DNA complete genome 39 1.8
gb|AC006369.3|AC006369 Homo sapiens BAC clone RP11-278G12 f... 39 1.8
gb|AF369213.1|AF369213 Homo sapiens fibroblast growth facto... 39 1.8
gb|AF044943.1|AF044943 Sus scrofa keratinocyte growth facto... 39 1.8
ref|NM_022970.1| Homo sapiens fibroblast growth factor rece... 39 1.8
gb|AF254368.1|AF254368 Drosophila melanogaster clone MP str... 39 1.8
dbj|AB013803.2|AB013803 Homo sapiens mRNA for hNB-2s, compl... 39 1.8
ref|XM_012030.4| Homo sapiens contactin 5 (CNTN5), mRNA 39 1.8
gb|AF369212.1|AF369212 Homo sapiens fibroblast growth facto... 39 1.8
ref|XM_046812.4| Homo sapiens contactin 2 (axonal) (CNTN2),... 39 1.8
gb|AF438165.1| Camelpox virus isolate M-96 from Kazakhstan,... 39 1.8
ref|NM_008478.2| Mus musculus L1 cell adhesion molecule (L1... 39 1.8
emb|X12875.1|MMNCAML1 Mouse mRNA for neural cell adhesion m... 39 1.8
gb|M87771.1|HUMKSAMIII Human secreted fibroblast growth fac... 39 1.8
gb|AF044944.1|AF044944 Sus scrofa keratinocyte growth facto... 39 1.8
gb|AF027133.1|AF027133 Sus scrofa keratinocyte growth facto... 39 1.8
emb|X67117.1|VVXHOIFOH Variola virus (XhoI-F,O,H,P,Q genome... 39 1.8
ref|NM_014361.1| Homo sapiens contactin 5 (CNTN5), mRNA 39 1.8
dbj|AB013802.2|AB013802 Homo sapiens mRNA for hNB-2, comple... 39 1.8
emb|X68274.1|HSTAG1 H.sapiens mRNA for TAG-1/axonin-1 39 1.8
gb|AF453868.1|AF453868 Lymantria dispar hemolin mRNA, compl... 39 1.8
gb|U18341.1|VVU18341 Variola virus Somalia-1977 right near-... 39 1.8
dbj|AK055684.1|AK055684 Homo sapiens cDNA FLJ31122 fis, clo... 39 1.8
ref|NM_005076.1| Homo sapiens contactin 2 (axonal) (CNTN2),... 39 1.8
emb|X72086.1|VMVGEN Variola minor virus complete genome 39 1.8
emb|X67734.1|HSTAG1A H.sapiens mRNA for transient axonal gl... 39 1.8
ref|XM_082643.1| bent, mRNA 39 1.8
gb|U18339.1|VVU18339 Variola virus Garcia-1966 right near-t... 39 1.8
emb|Y16780.1|VMVY16780 variola minor virus complete genome 39 1.8
gb|L22579.1|VARCG Variola major virus (strain Bangladesh-19... 39 1.8
gb|AF369211.1|AF369211 Homo sapiens fibroblast growth facto... 39 1.8
gb|AC078963.16|AC078963 Homo sapiens 12q BAC RP11-362K2 (Ro... 38 2.3
ref|NM_075741.1| neural cell adhesion molecule 38 2.3
ref|NM_004646.1| Homo sapiens nephrosis 1, congenital, Finn... 38 2.3
gb|AF035835.1|AF035835 Homo sapiens nephrin (NPHS1) mRNA, c... 38 2.3
dbj|AK022708.1|AK022708 Homo sapiens cDNA FLJ12646 fis, clo... 38 2.3
emb|X63101.1|GDAXONIN G.domesticus mRNA for axonin-1 38 2.3
gb|AF456360.1|AF456360 Caenorhabditis elegans immunoglobuli... 38 2.3
ref|NM_008029.1| Mus musculus FMS-like tyrosine kinase 4 (F... 38 2.3
gb|L07296.1|MUSRTKA Mus musculus receptor tyrosine kinase (... 38 2.3
gb|AF190637.1|AF190637 Homo sapiens nephrin mRNA, complete cds 38 2.3
ref|XM_002177.5| Homo sapiens nephrin related gene (NEPH1),... 38 2.3
dbj|AK025946.1|AK025946 Homo sapiens cDNA: FLJ22293 fis, cl... 38 2.3
emb|AL513324.8|AL513324 Human DNA sequence from clone RP11-... 38 3.0
gb|AF005070.1|AF005070 Homo sapiens neural cell adhesion mo... 38 3.0
gb|BC014276.1|BC014276 Homo sapiens, Similar to ortholog of... 38 3.0
ref|NM_000425.2| Homo sapiens L1 cell adhesion molecule (hy... 38 3.0
gb|AF035292.1|AF035292 Homo sapiens clone 23584 mRNA sequence 38 3.0
gb|M77640.1|HUMIGL1A Homo sapiens L1 cell adhesion molecule... 38 3.0
dbj|D90076.1|VACSANT Vaccinia virus surface(S) antigen 38 3.0
>ref|XM_002686.6| Homo sapiens interleukin 1 receptor, type I (IL1R1), mRNA
Length = 5177
Score = 1167 bits (3019), Expect = 0.0
Identities = 569/569 (100%), Positives = 569/569 (100%)
Frame = +2
Query: 1 MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKD 60
MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKD
Sbjct: 353 MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKD 532
Query: 61 DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNL 120
DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNL
Sbjct: 533 DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNL 712
Query: 121 CYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDR 180
CYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDR
Sbjct: 713 CYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDR 892
Query: 181 LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDL 240
LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDL
Sbjct: 893 LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDL 1072
Query: 241 GSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISE 300
GSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISE
Sbjct: 1073GSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISE 1252
Query: 301 IESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIFK 360
IESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIFK
Sbjct: 1253IESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIFK 1432
Query: 361 IDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCG 420
IDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCG
Sbjct: 1433IDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCG 1612
Query: 421 YKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQ 480
YKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQ
Sbjct: 1613YKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQ 1792
Query: 481 DGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPV 540
DGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPV
Sbjct: 1793DGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPV 1972
Query: 541 QRRSPSSKHQLLSPATKEKLQREAHVPLG 569
QRRSPSSKHQLLSPATKEKLQREAHVPLG
Sbjct: 1973QRRSPSSKHQLLSPATKEKLQREAHVPLG 2059
>ref|NM_000877.1| Homo sapiens interleukin 1 receptor, type I (IL1R1), mRNA
Length = 4910
Score = 1167 bits (3019), Expect = 0.0
Identities = 569/569 (100%), Positives = 569/569 (100%)
Frame = +2
Query: 1 MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKD 60
MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKD
Sbjct: 83 MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKD 262
Query: 61 DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNL 120
DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNL
Sbjct: 263 DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNL 442
Query: 121 CYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDR 180
CYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDR
Sbjct: 443 CYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDR 622
Query: 181 LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDL 240
LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDL
Sbjct: 623 LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDL 802
Query: 241 GSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISE 300
GSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISE
Sbjct: 803 GSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISE 982
Query: 301 IESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIFK 360
IESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIFK
Sbjct: 983 IESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIFK 1162
Query: 361 IDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCG 420
IDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCG
Sbjct: 1163IDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCG 1342
Query: 421 YKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQ 480
YKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQ
Sbjct: 1343YKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQ 1522
Query: 481 DGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPV 540
DGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPV
Sbjct: 1523DGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPV 1702
Query: 541 QRRSPSSKHQLLSPATKEKLQREAHVPLG 569
QRRSPSSKHQLLSPATKEKLQREAHVPLG
Sbjct: 1703QRRSPSSKHQLLSPATKEKLQREAHVPLG 1789
>emb|X16896.1|HSIL1RFT Human mRNA for interleukin-1 receptor (fibroblast type)
Length = 2156
Score = 1167 bits (3019), Expect = 0.0
Identities = 569/569 (100%), Positives = 569/569 (100%)
Frame = +3
Query: 1 MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKD 60
MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKD
Sbjct: 309 MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKD 488
Query: 61 DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNL 120
DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNL
Sbjct: 489 DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNL 668
Query: 121 CYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDR 180
CYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDR
Sbjct: 669 CYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDR 848
Query: 181 LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDL 240
LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDL
Sbjct: 849 LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDL 1028
Query: 241 GSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISE 300
GSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISE
Sbjct: 1029GSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISE 1208
Query: 301 IESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIFK 360
IESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIFK
Sbjct: 1209IESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIFK 1388
Query: 361 IDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCG 420
IDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCG
Sbjct: 1389IDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCG 1568
Query: 421 YKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQ 480
YKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQ
Sbjct: 1569YKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQ 1748
Query: 481 DGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPV 540
DGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPV
Sbjct: 1749DGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPV 1928
Query: 541 QRRSPSSKHQLLSPATKEKLQREAHVPLG 569
QRRSPSSKHQLLSPATKEKLQREAHVPLG
Sbjct: 1929QRRSPSSKHQLLSPATKEKLQREAHVPLG 2015
>gb|M27492.1|HUMIL1RA Human interleukin 1 receptor mRNA, complete cds
Length = 4910
Score = 1167 bits (3019), Expect = 0.0
Identities = 569/569 (100%), Positives = 569/569 (100%)
Frame = +2
Query: 1 MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKD 60
MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKD
Sbjct: 83 MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKD 262
Query: 61 DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNL 120
DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNL
Sbjct: 263 DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNL 442
Query: 121 CYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDR 180
CYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDR
Sbjct: 443 CYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDR 622
Query: 181 LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDL 240
LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDL
Sbjct: 623 LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDL 802
Query: 241 GSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISE 300
GSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISE
Sbjct: 803 GSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISE 982
Query: 301 IESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIFK 360
IESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIFK
Sbjct: 983 IESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIFK 1162
Query: 361 IDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCG 420
IDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCG
Sbjct: 1163IDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCG 1342
Query: 421 YKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQ 480
YKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQ
Sbjct: 1343YKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQ 1522
Query: 481 DGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPV 540
DGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPV
Sbjct: 1523DGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPV 1702
Query: 541 QRRSPSSKHQLLSPATKEKLQREAHVPLG 569
QRRSPSSKHQLLSPATKEKLQREAHVPLG
Sbjct: 1703QRRSPSSKHQLLSPATKEKLQREAHVPLG 1789
>dbj|AB020338.1|AB020338 Equus caballus mRNA for interleukin-1 receptor type I, complete cds
Length = 3090
Score = 927 bits (2397), Expect = 0.0
Identities = 446/573 (77%), Positives = 504/573 (87%), Gaps = 4/573 (0%)
Frame = +1
Query: 1 MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKD 60
MKVL RL+CFIALLISSLEADKC+ER E I+LVSSA EIDVR CPLNPNE GTI WYK+
Sbjct: 397 MKVLPRLVCFIALLISSLEADKCEERGEPIVLVSSAYEIDVRSCPLNPNESNGTIIWYKN 576
Query: 61 DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNL 120
DS+TPVS E+ SRIHQ+K+KLWFVPAK+EDSGHYYC VRNS+YCL++KI+A+FV++EP+L
Sbjct: 577 DSETPVSMERDSRIHQYKDKLWFVPAKIEDSGHYYCAVRNSTYCLKVKITARFVQHEPDL 756
Query: 121 CYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDR 180
CYNAQAIF QKLP+ DG LVCPY+E F++ENNELPK+QWYKDC+PLLLDNI+F G D+
Sbjct: 757 CYNAQAIFTQKLPLGEDGLLVCPYLEVFRDENNELPKIQWYKDCQPLLLDNINFIGKTDK 936
Query: 181 LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDL 240
LIV NV E H+G+YTCH SYT+LGKQYPITRVI ITL+E +PT+P+IVSP NETMEVDL
Sbjct: 937 LIVANVTEAHKGHYTCHISYTHLGKQYPITRVIGLITLDEIRPTKPLIVSPVNETMEVDL 1116
Query: 241 GSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISE 300
GSQ+QLICNVTG +D YW+WNGS+ID+ DPVL E+Y VENP+ KRR TLITVLNIS
Sbjct: 1117GSQVQLICNVTGMFTDFVYWRWNGSLIDDSDPVLVEEYKPVENPSLKRRHTLITVLNISA 1296
Query: 301 IESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIFK 360
+ESRFY +PFTC AKN++G AAY+QL PV +FQKH+IGI V LTV I CSVFIYK+FK
Sbjct: 1297VESRFYLYPFTCLAKNSYGRSAAYVQLRQPVPDFQKHVIGIFVLLTVAITCSVFIYKLFK 1476
Query: 361 IDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCG 420
+D+VLWYRDSCYDF KASDGKTYDAYILYPK +GEGSTS+ DIFVFKVLPEVLEKQCG
Sbjct: 1477VDLVLWYRDSCYDFRSPKASDGKTYDAYILYPKILGEGSTSNSDIFVFKVLPEVLEKQCG 1656
Query: 421 YKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQ 480
YKLFIYGRDDYVGEDIVEV NEN+KKSRRLIIILVRETSG SWLG SSEEQIAMYNALVQ
Sbjct: 1657YKLFIYGRDDYVGEDIVEVTNENIKKSRRLIIILVRETSGLSWLGSSSEEQIAMYNALVQ 1836
Query: 481 DGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPV 540
DGIK++LLELEKIQDYEKMPESIKFIK+KHGA+RWSGD +GPQSAK RFWKNVRY MPV
Sbjct: 1837DGIKIILLELEKIQDYEKMPESIKFIKRKHGALRWSGDSRKGPQSAKARFWKNVRYRMPV 2016
Query: 541 QRRSPSSKHQLLSPAT----KEKLQREAHVPLG 569
QR+ PSSK QLLSPAT KEKLQ E HVPLG
Sbjct: 2017QRQLPSSKCQLLSPATRPDSKEKLQGEVHVPLG 2115
>ref|NM_008362.1| Mus musculus interleukin 1 receptor, type I (Il1r1), mRNA
Length = 4740
Score = 823 bits (2126), Expect = 0.0
Identities = 393/574 (68%), Positives = 470/574 (81%), Gaps = 5/574 (0%)
Frame = +3
Query: 1 MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNE-HKGTITWYK 59
MKVLL LIC + L+S LE D C E +I+L S NEID+R CPL PN+ H TI WYK
Sbjct: 234 MKVLLGLICLMVPLLS-LEIDVCTEYPNQIVLFLSVNEIDIRKCPLTPNKMHGDTIIWYK 410
Query: 60 DDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPN 119
+DSKTP+S ++ SRIHQ E LWFVPAKVEDSG+YYC+VRNS+YCL+ K++ +EN+P
Sbjct: 411 NDSKTPISADRDSRIHQQNEHLWFVPAKVEDSGYYYCIVRNSTYCLKTKVTVTVLENDPG 590
Query: 120 LCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKD 179
LCY+ QA F Q+L +AGDG LVCPY+ +FK+ENNELP++QWYK+CKPLLLDN+ F GVKD
Sbjct: 591 LCYSTQATFPQRLHIAGDGSLVCPYVSYFKDENNELPEVQWYKNCKPLLLDNVSFFGVKD 770
Query: 180 RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVD 239
+L+V NVAE+HRG+Y C SYT+ GKQYP+TRVI+FIT++ENK RPVI+SP NET+E D
Sbjct: 771 KLLVRNVAEEHRGDYICRMSYTFRGKQYPVTRVIQFITIDENKRDRPVILSPRNETIEAD 950
Query: 240 LGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNIS 299
GS IQLICNVTGQ SD+ YWKWNGS I+ +DP L EDY VE+P+ KR+ TLIT LNIS
Sbjct: 951 PGSMIQLICNVTGQFSDLVYWKWNGSEIEWNDPFLAEDYQFVEHPSTKRKYTLITTLNIS 1130
Query: 300 EIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIF 359
E++S+FY++PF C KNT+ ++A++QLIYPV +F+ ++IG + LT IVC V IYK+F
Sbjct: 1131EVKSQFYRYPFICVVKNTNIFESAHVQLIYPVPDFKNYLIGGFIILTATIVCCVCIYKVF 1310
Query: 360 KIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQC 419
K+DIVLWYRDSC FLP KASDGKTYDAYILYPKT+GEGS SD D FVFK+LPEVLE Q
Sbjct: 1311KVDIVLWYRDSCSGFLPSKASDGKTYDAYILYPKTLGEGSFSDLDTFVFKLLPEVLEGQF 1490
Query: 420 GYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALV 479
GYKLFIYGRDDYVGED +EV NENVKKSRRLIIILVR+ GFSWLG SSEEQIA+YNAL+
Sbjct: 1491GYKLFIYGRDDYVGEDTIEVTNENVKKSRRLIIILVRDMGGFSWLGQSSEEQIAIYNALI 1670
Query: 480 QDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMP 539
Q+GIK+VLLELEKIQDYEKMP+SI+FIKQKHG I WSGDF + PQSAKTRFWKN+RY MP
Sbjct: 1671QEGIKIVLLELEKIQDYEKMPDSIQFIKQKHGVICWSGDFQERPQSAKTRFWKNLRYQMP 1850
Query: 540 VQRRSPSSKHQLLS----PATKEKLQREAHVPLG 569
QRRSP SKH+LL+ TKEKL H+PLG
Sbjct: 1851AQRRSPLSKHRLLTLDPVRDTKEKLPAATHLPLG 1952
>gb|M20658.1|MUSIL1TCR Mouse interleukin-1 receptor mRNA, complete cds
Length = 4740
Score = 823 bits (2126), Expect = 0.0
Identities = 393/574 (68%), Positives = 470/574 (81%), Gaps = 5/574 (0%)
Frame = +3
Query: 1 MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNE-HKGTITWYK 59
MKVLL LIC + L+S LE D C E +I+L S NEID+R CPL PN+ H TI WYK
Sbjct: 234 MKVLLGLICLMVPLLS-LEIDVCTEYPNQIVLFLSVNEIDIRKCPLTPNKMHGDTIIWYK 410
Query: 60 DDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPN 119
+DSKTP+S ++ SRIHQ E LWFVPAKVEDSG+YYC+VRNS+YCL+ K++ +EN+P
Sbjct: 411 NDSKTPISADRDSRIHQQNEHLWFVPAKVEDSGYYYCIVRNSTYCLKTKVTVTVLENDPG 590
Query: 120 LCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKD 179
LCY+ QA F Q+L +AGDG LVCPY+ +FK+ENNELP++QWYK+CKPLLLDN+ F GVKD
Sbjct: 591 LCYSTQATFPQRLHIAGDGSLVCPYVSYFKDENNELPEVQWYKNCKPLLLDNVSFFGVKD 770
Query: 180 RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVD 239
+L+V NVAE+HRG+Y C SYT+ GKQYP+TRVI+FIT++ENK RPVI+SP NET+E D
Sbjct: 771 KLLVRNVAEEHRGDYICRMSYTFRGKQYPVTRVIQFITIDENKRDRPVILSPRNETIEAD 950
Query: 240 LGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNIS 299
GS IQLICNVTGQ SD+ YWKWNGS I+ +DP L EDY VE+P+ KR+ TLIT LNIS
Sbjct: 951 PGSMIQLICNVTGQFSDLVYWKWNGSEIEWNDPFLAEDYQFVEHPSTKRKYTLITTLNIS 1130
Query: 300 EIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIF 359
E++S+FY++PF C KNT+ ++A++QLIYPV +F+ ++IG + LT IVC V IYK+F
Sbjct: 1131EVKSQFYRYPFICVVKNTNIFESAHVQLIYPVPDFKNYLIGGFIILTATIVCCVCIYKVF 1310
Query: 360 KIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQC 419
K+DIVLWYRDSC FLP KASDGKTYDAYILYPKT+GEGS SD D FVFK+LPEVLE Q
Sbjct: 1311KVDIVLWYRDSCSGFLPSKASDGKTYDAYILYPKTLGEGSFSDLDTFVFKLLPEVLEGQF 1490
Query: 420 GYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALV 479
GYKLFIYGRDDYVGED +EV NENVKKSRRLIIILVR+ GFSWLG SSEEQIA+YNAL+
Sbjct: 1491GYKLFIYGRDDYVGEDTIEVTNENVKKSRRLIIILVRDMGGFSWLGQSSEEQIAIYNALI 1670
Query: 480 QDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMP 539
Q+GIK+VLLELEKIQDYEKMP+SI+FIKQKHG I WSGDF + PQSAKTRFWKN+RY MP
Sbjct: 1671QEGIKIVLLELEKIQDYEKMPDSIQFIKQKHGVICWSGDFQERPQSAKTRFWKNLRYQMP 1850
Query: 540 VQRRSPSSKHQLLS----PATKEKLQREAHVPLG 569
QRRSP SKH+LL+ TKEKL H+PLG
Sbjct: 1851AQRRSPLSKHRLLTLDPVRDTKEKLPAATHLPLG 1952
>gb|M95578.1|RATIL1R Rattus notvegicus Sprague-Dawley interleukin-1 receptor type I
mRNA, complete cds
Length = 2187
Score = 808 bits (2086), Expect = 0.0
Identities = 387/574 (67%), Positives = 467/574 (80%), Gaps = 5/574 (0%)
Frame = +1
Query: 1 MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNE-HKGTITWYK 59
MKVLL IC I L+S LE DKC E ++I SS NEID+R CPL PNE H GTI WYK
Sbjct: 373 MKVLLGFICLIVPLLS-LETDKCTEYPNEVISFSSVNEIDIRSCPLTPNEMHGGTIIWYK 549
Query: 60 DDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPN 119
+DSKTP+S ++ SRIHQ E LWFVPAK+EDSG+YYC++RNS+YCL+ KI+ +EN+P
Sbjct: 550 NDSKTPISADKDSRIHQQNEHLWFVPAKMEDSGYYYCIMRNSTYCLKTKITMSVLENDPG 729
Query: 120 LCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKD 179
LCYN QA F Q+L VAGDG LVCPY++FFK+ENNELPK+QWYK+CKPL LD+ +F G K+
Sbjct: 730 LCYNTQASFIQRLHVAGDGSLVCPYLDFFKDENNELPKVQWYKNCKPLPLDDGNFFGFKN 909
Query: 180 RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVD 239
+L+VMNVAE+HRGNYTC SYTY GKQYP+TRVI FIT++++K RPVI+SP NETME D
Sbjct: 910 KLMVMNVAEEHRGNYTCRTSYTYQGKQYPVTRVITFITIDDSKRDRPVIMSPRNETMEAD 1089
Query: 240 LGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNIS 299
GS IQLICNVTGQ +D+ YWKWNGS I+ DDP+L EDY +E+P+ KR+ TLIT LN+S
Sbjct: 1090PGSTIQLICNVTGQFTDLVYWKWNGSEIEWDDPILAEDYQFLEHPSAKRKYTLITTLNVS 1269
Query: 300 EIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIF 359
E++S+FY++PF CF KNTH ++ A+++L+YPV +F+ ++IG T V IYK+F
Sbjct: 1270EVKSQFYRYPFICFVKNTHILETAHVRLVYPVPDFKNYLIGGFAIFTATAVFCACIYKVF 1449
Query: 360 KIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQC 419
K+DIVLWYRDSC DFLP KASDG+TYDAY+LYPKT GEGS + D FVFK+LPEVLE Q
Sbjct: 1450KVDIVLWYRDSCSDFLPRKASDGRTYDAYVLYPKTYGEGSFAYLDTFVFKLLPEVLEGQF 1629
Query: 420 GYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALV 479
GYKLFI GRDDYVGED +EV NENVK+SRRLIIILVR+ FS LG SSEEQIA+Y+AL+
Sbjct: 1630GYKLFICGRDDYVGEDTIEVTNENVKRSRRLIIILVRDMGSFSCLGQSSEEQIAIYDALI 1809
Query: 480 QDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMP 539
++GIK++LLELEKIQDYEKMPESI+FIKQKHGAI WSGDF + PQSAKTRFWKN+RY MP
Sbjct: 1810REGIKIILLELEKIQDYEKMPESIQFIKQKHGAICWSGDFKERPQSAKTRFWKNLRYQMP 1989
Query: 540 VQRRSPSSKHQLLS--PA--TKEKLQREAHVPLG 569
QRRSP SKH LL+ P TKEKLQ E H+PLG
Sbjct: 1990AQRRSPLSKHHLLTLDPVLDTKEKLQAETHLPLG 2091
>gb|M81846.1|CHKIL1REC Gallus gallus IL-1 receptor I mRNA, complete cds
Length = 1860
Score = 446 bits (1147), Expect = e-123
Identities = 234/550 (42%), Positives = 338/550 (60%), Gaps = 3/550 (0%)
Frame = +1
Query: 7 LICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPV 66
LI + LLI A++C +LV I L +TWY++ S P+
Sbjct: 202 LIGHLILLIPLFSAEECVICNY-FVLVGEPTAISCPVITLPMLHSDYNLTWYRNGSNMPI 378
Query: 67 STEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQA 126
+TE+ +RIHQ K LWF+PA +EDSG Y C VR+ + + I+ K +N+ LC+N +
Sbjct: 379 TTERRARIHQRKGLLWFIPAALEDSGLYECEVRSLNRSKQKIINLKVFKNDNGLCFNGEM 558
Query: 127 IFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN--IHFSGVKDRLIVM 184
+ Q + A G ++CP +E FK+E+N P++ WYK+CK L++ + + ++ ++++
Sbjct: 559 KYDQIVKSANAGKIICPDLENFKDEDNINPEIHWYKECKSGFLEDKRLVLAEGENAILIL 738
Query: 185 NVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQI 244
NV + +GNYTC YTY+GKQY ++R + E RP + P N T+EV+LGS +
Sbjct: 739 NVTIQDKGNYTCRMVYTYMGKQYNVSRTMNLEVKESPLKMRPEFIYPNNNTIEVELGSHV 918
Query: 245 QLICNVT-GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIES 303
+ CNV+ G + YW+ N +D D E +Y P S T NISE++
Sbjct: 919 VMECNVSSGVYGLLPYWQVNDEDVDSFDSTYREQFYEEGMPHGIAVSG--TKFNISEVKL 1092
Query: 304 RFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIFKIDI 363
+ Y + F C +YI+L +PV N + ++IG ++L ++ + +YKIFKIDI
Sbjct: 1093KDYAYKFFCHFIYDSQEFTSYIKLEHPVQNIRGYLIGGGISLIFLLFLILIVYKIFKIDI 1272
Query: 364 VLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCGYKL 423
VLWYR SC+ L K SDGK YDAY+LYPK E DIF K+LPEVLE+QCGY L
Sbjct: 1273VLWYRSSCHPLLGKKVSDGKIYDAYVLYPKN-RESCLYSSDIFALKILPEVLERQCGYNL 1449
Query: 424 FIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQDGI 483
FI+GR+D GE +++V +E + +SRR+IIILV E S + L +SE+ +A+YNAL+QDGI
Sbjct: 1450FIFGRNDLAGEAVIDVTDEKIHQSRRVIIILVPEPSCYGILEDASEKHLAVYNALIQDGI 1629
Query: 484 KVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQRR 543
K++L+ELEKI+DY MPESIK++KQK+GAIRW+GDF++ SA TRFWK VRYHMP ++
Sbjct: 1630KIILIELEKIEDYANMPESIKYVKQKYGAIRWTGDFSERSHSASTRFWKKVRYHMPSRKH 1809
Query: 544 SPSSKHQLLS 553
SS L S
Sbjct: 1810GSSSGFHLSS 1839
>ref|NM_013123.1| Rattus norvegicus Interleukin 1 receptor, type I (Il1r1), mRNA
Length = 1048
Score = 403 bits (1035), Expect = e-110
Identities = 187/279 (67%), Positives = 226/279 (80%), Gaps = 1/279 (0%)
Frame = +1
Query: 1 MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNE-HKGTITWYK 59
MKVLL IC I L+S LE DKC E ++I SS NEID+R CPL PNE H GTI WYK
Sbjct: 1 MKVLLGFICLIVPLLS-LETDKCTEYPNEVISFSSVNEIDIRSCPLTPNEMHGGTIIWYK 177
Query: 60 DDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPN 119
+DSKTP+S ++ SRIHQ E LWFVPAK+EDSG+YYC++RNS+YCL+ KI+ +EN+P
Sbjct: 178 NDSKTPISADKDSRIHQQNEHLWFVPAKMEDSGYYYCIMRNSTYCLKTKITMSVLENDPG 357
Query: 120 LCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKD 179
LCYN QA F Q+L VAGDG LVCPY++FFK+ENNELPK+QWYK+CKPL LD+ +F G K+
Sbjct: 358 LCYNTQASFIQRLHVAGDGSLVCPYLDFFKDENNELPKVQWYKNCKPLPLDDGNFFGFKN 537
Query: 180 RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVD 239
+L+VMNVAE+HRGNYTC SYTY GKQYP+TRVI FIT++++K RPVI+SP NETME D
Sbjct: 538 KLMVMNVAEEHRGNYTCRTSYTYQGKQYPVTRVITFITIDDSKRDRPVIMSPRNETMEAD 717
Query: 240 LGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDY 278
GS IQLICNVTGQ +D+ YWKWNGS I+ DDP+L EDY
Sbjct: 718 PGSTIQLICNVTGQFTDLVYWKWNGSEIEWDDPILAEDY 834
>gb|U14010.1|RNU14010 Rattus norvegicus soluble IL-1 receptor type I mRNA, complete cds
Length = 1048
Score = 403 bits (1035), Expect = e-110
Identities = 187/279 (67%), Positives = 226/279 (80%), Gaps = 1/279 (0%)
Frame = +1
Query: 1 MKVLLRLICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNE-HKGTITWYK 59
MKVLL IC I L+S LE DKC E ++I SS NEID+R CPL PNE H GTI WYK
Sbjct: 1 MKVLLGFICLIVPLLS-LETDKCTEYPNEVISFSSVNEIDIRSCPLTPNEMHGGTIIWYK 177
Query: 60 DDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPN 119
+DSKTP+S ++ SRIHQ E LWFVPAK+EDSG+YYC++RNS+YCL+ KI+ +EN+P
Sbjct: 178 NDSKTPISADKDSRIHQQNEHLWFVPAKMEDSGYYYCIMRNSTYCLKTKITMSVLENDPG 357
Query: 120 LCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKD 179
LCYN QA F Q+L VAGDG LVCPY++FFK+ENNELPK+QWYK+CKPL LD+ +F G K+
Sbjct: 358 LCYNTQASFIQRLHVAGDGSLVCPYLDFFKDENNELPKVQWYKNCKPLPLDDGNFFGFKN 537
Query: 180 RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVD 239
+L+VMNVAE+HRGNYTC SYTY GKQYP+TRVI FIT++++K RPVI+SP NETME D
Sbjct: 538 KLMVMNVAEEHRGNYTCRTSYTYQGKQYPVTRVITFITIDDSKRDRPVIMSPRNETMEAD 717
Query: 240 LGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDY 278
GS IQLICNVTGQ +D+ YWKWNGS I+ DDP+L EDY
Sbjct: 718 PGSTIQLICNVTGQFTDLVYWKWNGSEIEWDDPILAEDY 834
>gb|AF284433.1|AF284433 Mus musculus IL-1Rrp2 mRNA, complete cds
Length = 1955
Score = 391 bits (1004), Expect = e-106
Identities = 225/568 (39%), Positives = 330/568 (57%), Gaps = 16/568 (2%)
Frame = +1
Query: 1 MKVLLRLICFIA-LLISSLEADKCKEREEKIILVSSANEIDVRPCPLN---PNEHKGTI- 55
M V L C + LL+ + AD C++ +++S +P P N P E G +
Sbjct: 205 MGVTSLLFCGVFFLLLLFVAADTCEDIFMHNVIISEG-----QPFPFNCTYPPETNGAVN 369
Query: 56 -TWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
TWYK SK+PVS + R+HQ + + F+P +EDSG Y CV+RN+ C +I ++ +
Sbjct: 370 LTWYKTPSKSPVSNNRHLRVHQDQTWILFLPLTLEDSGIYQCVIRNAHNCYQIAVNLTVL 549
Query: 115 ENE------PNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLL 168
+N N+ +++Q LP+ G L C + E+ L ++WYK C+ +
Sbjct: 550 KNHWCDSSMEGSPVNSPDVYQQILPIGKSGSLNC---HLYFPESCALDSIKWYKGCEEIK 720
Query: 169 LDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTR-PV 227
+S +L+V NVA + G+Y C A T+LG+ + I I T E R P
Sbjct: 721 AGK-KYSPSGAKLLVNNVAVEDGGSYACSARLTHLGRHFTIRNYIAVNTKEVEYGRRIPN 897
Query: 228 IVSPANETMEVDLGSQIQLICNVTG--QLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPA 285
I P N ++EV LGS + + CN+T + +++ W+ N +++D+ +E
Sbjct: 898 ITYPKNNSIEVPLGSTLIVNCNITDTKENTNLRCWRVNNTLVDDYYKDSKRIQEGIETNV 1077
Query: 286 NKRRSTLITV-LNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVT 344
+ R TV + +++ Y PFTC A G+ AAYI LIYPV +F+ +++G +
Sbjct: 1078SLRDQIRYTVNITFLKVKMEDYGRPFTCHA----GVSAAYIILIYPVPDFRAYLLGGLMA 1245
Query: 345 LTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCD 404
+++V +FIY FKIDI+LWYR + + D K YDAY+LYPK D D
Sbjct: 1246FLLLVVSVLFIYNSFKIDIMLWYRSAFHTAQA--PDDEKLYDAYVLYPKYPRGSQGHDVD 1419
Query: 405 IFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWL 464
V K+LPEVLEKQCGYKLFI+GRD++ G+ + VI+EN+K RRL++ + E+S F +L
Sbjct: 1420TLVLKILPEVLEKQCGYKLFIFGRDEFPGQAVASVIDENIKLCRRLMVFVAPESSSFGFL 1599
Query: 465 GGSSEEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQ 524
SEEQIA+YNAL+Q G+KV+L+ELEK++DY MPESI++I+QKHGAI+W GDFT+ Q
Sbjct: 1600KNLSEEQIAVYNALIQHGMKVILIELEKVKDYSTMPESIQYIRQKHGAIQWDGDFTEQSQ 1779
Query: 525 SAKTRFWKNVRYHMPVQRRSPSSKHQLL 552
AKT+FWK VRYHMP +R SS QLL
Sbjct: 1780CAKTKFWKKVRYHMPPRRYPASSPVQLL 1863
>ref|XM_002685.2| Homo sapiens interleukin 1 receptor-like 2 (IL1RL2), mRNA
Length = 1964
Score = 385 bits (989), Expect = e-105
Identities = 232/562 (41%), Positives = 325/562 (57%), Gaps = 16/562 (2%)
Frame = +1
Query: 7 LICFIALLIS-SLEADKCKEREEKIILVSSANEIDVRPCPLNP-NEHKGTITWYKDDSKT 64
L+C +++ + S+ AD CK+ K ++S++ C P + ++TWYK+ SK
Sbjct: 139 LLCGLSIALPLSVTADGCKDIFMKNEILSASQPFAFN-CTFPPITSGEVSVTWYKNSSKI 315
Query: 65 PVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENE------- 117
PVS SRIHQ + + F+P + DSG Y CV++ C RI ++ E
Sbjct: 316 PVSKIIQSRIHQDETWILFLPMEWGDSGVYQCVIKGRDSCHRIHVNLTVFEKHWCDTSIG 495
Query: 118 --PNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFS 175
PNL +KQ L + D L C ++ F K+ L ++WYKDC + + F+
Sbjct: 496 GLPNLSDE----YKQILHLGKDDSLTC-HLHFPKS--CVLGPIKWYKDCNEIKGER--FT 648
Query: 176 GVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENK--PTRPVIVSPAN 233
++ RL+V NV+ + RGNY C A T+ GKQY + I E + P I+ P N
Sbjct: 649 VLETRLLVSNVSAEDRGNYACQAILTHSGKQYEVLNGITVSITERAGYGGSVPKIIYPKN 828
Query: 234 ETMEVDLGSQIQLICNVTGQL--SDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRST 291
++EV LG+ + + CNVT +++ W+ N +++D+ VE + R
Sbjct: 829 HSIEVQLGTTLIVDCNVTDTKDNTNLRCWRVNNTLVDDYYDESKRIREGVETHVSFREHN 1008
Query: 292 LITV-LNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIV 350
L TV + E++ Y PF C A G+ AYI L P +F+ ++IG + L + V
Sbjct: 1009LYTVNITFLEVKMEDYGLPFMCHA----GVSTAYIILQLPAPDFRAYLIGGLIALVAVAV 1176
Query: 351 CSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKV 410
V+IY IFKIDIVLWYR + + I DGK YDAY+LYPK E D V +
Sbjct: 1177SVVYIYNIFKIDIVLWYRSAFHSTETIV--DGKLYDAYVLYPKPHKESQRHAVDALVLNI 1350
Query: 411 LPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEE 470
LPEVLE+QCGYKLFI+GRD++ G+ + VI+ENVK RRLI+I+V E+ GF L SEE
Sbjct: 1351LPEVLERQCGYKLFIFGRDEFPGQAVANVIDENVKLCRRLIVIVVPESLGFGLLKNLSEE 1530
Query: 471 QIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRF 530
QIA+Y+AL+QDG+KV+L+ELEKI+DY MPESI++IKQKHGAIRW GDFT+ Q KT+F
Sbjct: 1531QIAVYSALIQDGMKVILIELEKIEDYTVMPESIQYIKQKHGAIRWHGDFTEQSQCMKTKF 1710
Query: 531 WKNVRYHMPVQRRSPSSKHQLL 552
WK VRYHMP +R P QLL
Sbjct: 1711WKTVRYHMPPRRCRPFPPVQLL 1776
>gb|AF284434.1|AF284434 Homo sapiens IL-1Rrp2 mRNA, complete cds
Length = 1972
Score = 385 bits (988), Expect = e-105
Identities = 232/562 (41%), Positives = 325/562 (57%), Gaps = 16/562 (2%)
Frame = +3
Query: 7 LICFIALLIS-SLEADKCKEREEKIILVSSANEIDVRPCPLNP-NEHKGTITWYKDDSKT 64
L+C +++ + S+ AD CK+ K ++S++ C P + ++TWYK+ SK
Sbjct: 147 LLCGLSIALPLSVTADGCKDIFMKNEILSASQPFAFN-CTFPPITSGEVSVTWYKNSSKI 323
Query: 65 PVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENE------- 117
PVS SRIHQ + + F+P + DSG Y CV++ C RI ++ E
Sbjct: 324 PVSKIIQSRIHQDETWILFLPMEWGDSGVYQCVIKGRDSCHRIHVNLTVFEKHWCDTSIG 503
Query: 118 --PNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFS 175
PNL +KQ L + D L C ++ F K+ L ++WYKDC + + F+
Sbjct: 504 GLPNLSDE----YKQILHLGKDDSLTC-HLHFPKS--CVLGPIKWYKDCNEIKGER--FT 656
Query: 176 GVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENK--PTRPVIVSPAN 233
++ RL+V NV+ + RGNY C A T+ GKQY + I E + P I+ P N
Sbjct: 657 VLETRLLVSNVSAEDRGNYACQAILTHSGKQYEVLNGITVSITERAGYGGSVPKIIYPKN 836
Query: 234 ETMEVDLGSQIQLICNVTGQL--SDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRST 291
++EV LG+ + + CNVT +++ W+ N +++D+ VE + R
Sbjct: 837 HSIEVQLGTTLIVDCNVTDTKDNTNLRCWRVNNTLVDDYYDESKRIREGVETHVSFREHN 1016
Query: 292 LITV-LNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIV 350
L TV + E++ Y PF C A G+ AYI L P +F+ ++IG + L + V
Sbjct: 1017LYTVNITFLEVKMEDYGLPFMCHA----GVSTAYIILQLPAPDFRAYLIGGLIALVAVAV 1184
Query: 351 CSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKV 410
V+IY IFKIDIVLWYR + + I DGK YDAY+LYPK E D V +
Sbjct: 1185SVVYIYNIFKIDIVLWYRSAFHSTETIV--DGKLYDAYVLYPKPHKESQRHAVDALVLNI 1358
Query: 411 LPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEE 470
LPEVLE+QCGYKLFI+GRD++ G+ + VI+ENVK RRLI+I+V E+ GF L SEE
Sbjct: 1359LPEVLERQCGYKLFIFGRDEFPGQAVANVIDENVKLCRRLIVIVVPESLGFGLLKNLSEE 1538
Query: 471 QIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRF 530
QIA+Y+AL+QDG+KV+L+ELEKI+DY MPESI++IKQKHGAIRW GDFT+ Q KT+F
Sbjct: 1539QIAVYSALIQDGMKVILVELEKIEDYTVMPESIQYIKQKHGAIRWHGDFTEQSQCMKTKF 1718
Query: 531 WKNVRYHMPVQRRSPSSKHQLL 552
WK VRYHMP +R P QLL
Sbjct: 1719WKTVRYHMPPRRCRPFPPVQLL 1784
>ref|NM_003854.1| Homo sapiens interleukin 1 receptor-like 2 (IL1RL2), mRNA
Length = 1971
Score = 384 bits (987), Expect = e-104
Identities = 235/582 (40%), Positives = 330/582 (56%), Gaps = 22/582 (3%)
Frame = +3
Query: 7 LICFIALLIS-SLEADKCKEREEKIILVSSANEIDVRPCPLNP-NEHKGTITWYKDDSKT 64
L+C +++ + S+ AD CK+ K ++S++ C P + ++TWYK+ SK
Sbjct: 147 LLCGLSIALPLSVTADGCKDIFMKNEILSASQPFAFN-CTFPPITSGEVSVTWYKNSSKI 323
Query: 65 PVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENE------- 117
PVS SRIHQ + + F+P + DSG Y CV++ C RI ++ E
Sbjct: 324 PVSKIIQSRIHQDETWILFLPMEWGDSGVYQCVIKGRDSCHRIHVNLTVFEKHWCDTSIG 503
Query: 118 --PNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFS 175
PNL +KQ L + D L C ++ F K+ L ++WYKDC + + F+
Sbjct: 504 GLPNLSDE----YKQILHLGKDDSLTC-HLHFPKS--CVLGPIKWYKDCNEIKGER--FT 656
Query: 176 GVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENK--PTRPVIVSPAN 233
++ RL+V NV+ + RGNY C A T+ GKQY + I E + P I+ P N
Sbjct: 657 VLETRLLVSNVSAEDRGNYACQAILTHSGKQYEVLNGITVSITERAGYGGSVPKIIYPKN 836
Query: 234 ETMEVDLGSQIQLICNVTGQL--SDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRST 291
++EV LG+ + + CNVT +++ W+ N +++D+ VE + R
Sbjct: 837 HSIEVQLGTTLIVDCNVTDTKDNTNLRCWRVNNTLVDDYYDESKRIREGVETHVSFREHN 1016
Query: 292 LITV-LNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIV 350
L TV + E++ Y PF C A G+ AYI L P +F+ ++IG + L + V
Sbjct: 1017LYTVNITFLEVKMEDYGLPFMCHA----GVSTAYIILQLPAPDFRAYLIGGLIALVAVAV 1184
Query: 351 CSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKV 410
V+IY IFKIDIVLWYR + + I DGK YDAY+LYPK E D V +
Sbjct: 1185SVVYIYNIFKIDIVLWYRSAFHSTETIV--DGKLYDAYVLYPKPHKESQRHAVDALVLNI 1358
Query: 411 LPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEE 470
LPEVLE+QCGYKLFI+GRD++ G+ + VI+ENVK RRLI+I+V E+ GF L SEE
Sbjct: 1359LPEVLERQCGYKLFIFGRDEFPGQAVANVIDENVKLCRRLIVIVVPESLGFGLLKNLSEE 1538
Query: 471 QIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRF 530
QIA+Y+AL+QDG+KV+L+ELEKI+DY MPESI++IKQKHGAIRW GDFT+ Q KT+F
Sbjct: 1539QIAVYSALIQDGMKVILIELEKIEDYTVMPESIQYIKQKHGAIRWHGDFTEQSQCMKTKF 1718
Query: 531 WKNVRYHMPVQRRSP------SSKHQLLSPATKEKLQREAHV 566
WK VRYHMP +R P S H +P + Q E V
Sbjct: 1719WKTVRYHMPPRRCRPFLRSTCRSTHLCTAPQAQN*AQEERSV 1844
>gb|U49065.1|HSU49065 Human interleukin-1 receptor-related protein mRNA, complete cds
Length = 1971
Score = 384 bits (987), Expect = e-104
Identities = 235/582 (40%), Positives = 330/582 (56%), Gaps = 22/582 (3%)
Frame = +3
Query: 7 LICFIALLIS-SLEADKCKEREEKIILVSSANEIDVRPCPLNP-NEHKGTITWYKDDSKT 64
L+C +++ + S+ AD CK+ K ++S++ C P + ++TWYK+ SK
Sbjct: 147 LLCGLSIALPLSVTADGCKDIFMKNEILSASQPFAFN-CTFPPITSGEVSVTWYKNSSKI 323
Query: 65 PVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENE------- 117
PVS SRIHQ + + F+P + DSG Y CV++ C RI ++ E
Sbjct: 324 PVSKIIQSRIHQDETWILFLPMEWGDSGVYQCVIKGRDSCHRIHVNLTVFEKHWCDTSIG 503
Query: 118 --PNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFS 175
PNL +KQ L + D L C ++ F K+ L ++WYKDC + + F+
Sbjct: 504 GLPNLSDE----YKQILHLGKDDSLTC-HLHFPKS--CVLGPIKWYKDCNEIKGER--FT 656
Query: 176 GVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENK--PTRPVIVSPAN 233
++ RL+V NV+ + RGNY C A T+ GKQY + I E + P I+ P N
Sbjct: 657 VLETRLLVSNVSAEDRGNYACQAILTHSGKQYEVLNGITVSITERAGYGGSVPKIIYPKN 836
Query: 234 ETMEVDLGSQIQLICNVTGQL--SDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRST 291
++EV LG+ + + CNVT +++ W+ N +++D+ VE + R
Sbjct: 837 HSIEVQLGTTLIVDCNVTDTKDNTNLRCWRVNNTLVDDYYDESKRIREGVETHVSFREHN 1016
Query: 292 LITV-LNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIV 350
L TV + E++ Y PF C A G+ AYI L P +F+ ++IG + L + V
Sbjct: 1017LYTVNITFLEVKMEDYGLPFMCHA----GVSTAYIILQLPAPDFRAYLIGGLIALVAVAV 1184
Query: 351 CSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKV 410
V+IY IFKIDIVLWYR + + I DGK YDAY+LYPK E D V +
Sbjct: 1185SVVYIYNIFKIDIVLWYRSAFHSTETIV--DGKLYDAYVLYPKPHKESQRHAVDALVLNI 1358
Query: 411 LPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEE 470
LPEVLE+QCGYKLFI+GRD++ G+ + VI+ENVK RRLI+I+V E+ GF L SEE
Sbjct: 1359LPEVLERQCGYKLFIFGRDEFPGQAVANVIDENVKLCRRLIVIVVPESLGFGLLKNLSEE 1538
Query: 471 QIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRF 530
QIA+Y+AL+QDG+KV+L+ELEKI+DY MPESI++IKQKHGAIRW GDFT+ Q KT+F
Sbjct: 1539QIAVYSALIQDGMKVILIELEKIEDYTVMPESIQYIKQKHGAIRWHGDFTEQSQCMKTKF 1718
Query: 531 WKNVRYHMPVQRRSP------SSKHQLLSPATKEKLQREAHV 566
WK VRYHMP +R P S H +P + Q E V
Sbjct: 1719WKTVRYHMPPRRCRPFLRSTCRSTHLCTAPQAQN*AQEERSV 1844
>gb|U49066.1|RNU49066 Rattus norvegicus interleukin-1 receptor-related protein mRNA,
complete cds
Length = 2044
Score = 376 bits (966), Expect = e-102
Identities = 206/509 (40%), Positives = 303/509 (59%), Gaps = 11/509 (2%)
Frame = +2
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+TW++ SK+P+S + RIHQ + + F+P +EDSG Y CV++++ C RI I+
Sbjct: 254 LTWHRTPSKSPISINRHVRIHQDQSWILFLPLALEDSGIYQCVIKDAHSCYRIAINLTVF 433
Query: 115 E-------NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPL 167
NE + N+ ++Q LP+ G L C + E+ L ++WYK C+ +
Sbjct: 434 RKHWCDSSNEES-SINSSDEYQQWLPIGKSGSLTC---HLYFPESCVLDSIKWYKGCEEI 601
Query: 168 LLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTR-P 226
+ F +L+V N+ + G+Y C A T+LG+ + + I T E R P
Sbjct: 602 KVSK-KFCPTGTKLLVNNIDVEDSGSYACSARLTHLGRIFTVRNYIAVNTKEVGSGGRIP 778
Query: 227 VIVSPANETMEVDLGSQIQLICNVTG--QLSDIAYWKWNGSVIDEDDPVLGEDYYSVENP 284
I P N ++EV LGS + + CN+T + +++ W+ N +++D+ +E
Sbjct: 779 NITYPKNNSIEVQLGSTLIVDCNITDTKENTNLRCWRVNNTLVDDYYNDFKRIQEGIETN 958
Query: 285 ANKRRSTLITV-LNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICV 343
+ R L TV + E++ Y HPFTC A + AAYI L P +F+ ++IG +
Sbjct: 959 LSLRNHILYTVNITFLEVKMEDYGHPFTCHA----AVSAAYIILKRPAPDFRAYLIGGLM 1126
Query: 344 TLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDC 403
++ V ++IY FK+DIVLWYR + + D K YDAY+LYPK E D
Sbjct: 1127AFLLLAVSILYIYNTFKVDIVLWYRSTFHTAQA--PDDEKLYDAYVLYPKYPRESQGHDV 1300
Query: 404 DIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSW 463
D V K+LPEVLEKQCGYKLFI+GRD++ G+ + VI+EN+K RRL++++ ETS FS+
Sbjct: 1301DTLVLKILPEVLEKQCGYKLFIFGRDEFPGQAVASVIDENIKLCRRLMVLVAPETSSFSF 1480
Query: 464 LGGSSEEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGP 523
L +EEQIA+YNALVQDG+KV+L+ELE+++DY MPESI++I+QKHGAI+W GDFT+
Sbjct: 1481LKNLTEEQIAVYNALVQDGMKVILIELERVKDYSTMPESIQYIRQKHGAIQWDGDFTEQA 1660
Query: 524 QSAKTRFWKNVRYHMPVQRRSPSSKHQLL 552
Q AKT+FWK VRYHMP +R S QLL
Sbjct: 1661QCAKTKFWKKVRYHMPPRRYPASPPVQLL 1747
>gb|AC007271.3|AC007271 Homo sapiens BAC clone RP11-4B12 from 2, complete sequence
Length = 179954
Score = 271 bits (693), Expect = 1e-70
Identities = 135/135 (100%), Positives = 135/135 (100%)
Frame = -1
Query: 435 DIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQ 494
DIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQ
Sbjct: 51089 DIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQ 50910
Query: 495 DYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQLLSP 554
DYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQLLSP
Sbjct: 50909 DYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQLLSP 50730
Query: 555 ATKEKLQREAHVPLG 569
ATKEKLQREAHVPLG
Sbjct: 50729 ATKEKLQREAHVPLG 50685
Score = 171 bits (434), Expect(2) = 7e-76
Identities = 79/79 (100%), Positives = 79/79 (100%)
Frame = -2
Query: 21 DKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEK 80
DKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEK
Sbjct: 62668 DKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEK 62489
Query: 81 LWFVPAKVEDSGHYYCVVR 99
LWFVPAKVEDSGHYYCVVR
Sbjct: 62488 LWFVPAKVEDSGHYYCVVR 62432
Score = 139 bits (350), Expect(2) = 7e-76
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = -3
Query: 99 RNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKL 158
RNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKL
Sbjct: 62328 RNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKL 62149
Query: 159 QWYK 162
QWYK
Sbjct: 62148 QWYK 62137
Score = 122 bits (305), Expect = 1e-25
Identities = 57/59 (96%), Positives = 58/59 (97%)
Frame = -1
Query: 163 DCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN 221
DCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITL E+
Sbjct: 61328 DCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLGES 61152
Score = 120 bits (302), Expect = 3e-25
Identities = 56/56 (100%), Positives = 56/56 (100%)
Frame = -2
Query: 379 ASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGE 434
ASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGE
Sbjct: 51964 ASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGE 51797
Score = 107 bits (267), Expect = 3e-21
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = -3
Query: 280 SVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 330
SVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP
Sbjct: 54756 SVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 54604
Score = 103 bits (258), Expect = 3e-20
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2
Query: 331 VTNFQKHMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIK 378
VTNFQKHMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIK
Sbjct: 52855 VTNFQKHMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIK 52712
Score = 87.8 bits (216), Expect = 3e-15
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -3
Query: 241 GSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYY 279
GSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYY
Sbjct: 55641 GSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYY 55525
Score = 52.8 bits (125), Expect = 9e-05
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = -1
Query: 209 ITRVIEFITLEENKPTRPVIVSPANETMEVDLG 241
+T +++ EENKPTRPVIVSPANETMEVDLG
Sbjct: 58874 LTNLMDVFLSEENKPTRPVIVSPANETMEVDLG 58776
Score = 52.8 bits (125), Expect = 9e-05
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = -1
Query: 7 LICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNP-NEHKGTITWYKDDSKTP 65
L CF+ L + D CK+ K ++S++ C P + ++TWYK+ SK P
Sbjct: 38393 LFCFVFLSL-----DGCKDIFMKNEILSASQPFAFN-CTFPPITSGEVSVTWYKNSSKIP 38232
Query: 66 VSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVR 99
VS SRIHQ + + F+P + DSG Y CV++
Sbjct: 38231 VSKIIQSRIHQDETWILFLPMEWGDSGVYQCVIK 38130
Score = 45.8 bits (107), Expect = 0.011
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = -1
Query: 327 LIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDS 370
L + +F+ ++IG + L + V V+IY IFKIDIVLWYR +
Sbjct: 1556 LSFVAPDFRAYLIGGLIALVAVAVSVVYIYNIFKIDIVLWYRSA 1425
Score = 41.2 bits (95), Expect = 0.27
Identities = 20/49 (40%), Positives = 30/49 (60%)
Frame = -2
Query: 161 YKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPI 209
Y DC + + F+ ++ RL+V NV+ + RGNY C A T+ GKQY +
Sbjct: 25891 Y*DCNEIKGER--FTVLETRLLVSNVSAEDRGNYACQAILTHSGKQYEV 25751
Score = 41.2 bits (95), Expect = 0.27
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -1
Query: 1 MKVLLRLICFIALLISSLEADK 22
MKVLLRLICFIALLISSLEA K
Sbjct: 69716 MKVLLRLICFIALLISSLEAGK 69651
>gb|S70238.1|S70238 type I interleukin-1 receptor [rats, intestinal epithelial IEC-18
cells, ATCC 1589, mRNA Partial, 509 nt]
Length = 509
Score = 271 bits (692), Expect = 2e-70
Identities = 133/169 (78%), Positives = 149/169 (87%)
Frame = +3
Query: 362 DIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCGY 421
DIVLWYRDSC DFLP KASDGKTYDAY+LYPKT GEGS + D FVFK+LPEVLE Q GY
Sbjct: 3 DIVLWYRDSCSDFLPPKASDGKTYDAYVLYPKTYGEGSFAYLDTFVFKLLPEVLEGQFGY 182
Query: 422 KLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQD 481
KLFI GRDDYVGED +EV NENVK+SRRLIIILVR+ FS LG SSEEQIA+Y+AL+++
Sbjct: 183 KLFICGRDDYVGEDTIEVTNENVKRSRRLIIILVRDMGSFSCLGQSSEEQIAIYDALIRE 362
Query: 482 GIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRF 530
GIK++LLELE+IQDYEKMPESI+FIKQKHGAI WSGDF + PQSAKTRF
Sbjct: 363 GIKIILLELEEIQDYEKMPESIQFIKQKHGAICWSGDFKERPQSAKTRF 509
>dbj|AB041738.2|AB041738 Gallus gallus mRNA for ST2L, complete cds
Length = 2971
Score = 249 bits (635), Expect = 7e-64
Identities = 155/504 (30%), Positives = 265/504 (51%), Gaps = 11/504 (2%)
Frame = +2
Query: 55 ITWYKDDSKTPV-STEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRI-KISAK 112
+TW+ ++ + E+ SR+ LWF+P +EDSG+Y CV+ + K++ +
Sbjct: 227 VTWHHTGTRKRIPEEEEGSRVFSKGIFLWFLPTSLEDSGNYTCVINYPDGSKKERKMNVQ 406
Query: 113 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI 172
+ C+ ++ ++ + G + CP ++N +QWYKDC+P+ +
Sbjct: 407 VHPYKQGTCFPSRILYANE---TRKGKISCPTFRNYENATI----IQWYKDCRPIQGERY 565
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA 232
+ + N+ ++ G YTC +YT+ G+ + ++ F++ ++ I+ P
Sbjct: 566 FMHD--PYIFIENLNKEDDGYYTCQFTYTHRGRVFNVSATRIFVSEAKHSSLPVQILFPK 739
Query: 233 NE-TMEVDLGSQIQLICN----VTGQLSDIAYWKWN---GSVIDEDDPVLGEDYYSVENP 284
+E +EV+LG+ L C + Q + W N DE+ Y+ ++
Sbjct: 740 DEDVLEVELGAAFSLKCQARLGIKKQPIAVVTWDVNKMPAEYADEEKIRQEFSYFEGQHQ 919
Query: 285 ANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQL-IYPVTNFQKHMIGICV 343
+TL IS IE + F+C A N G + L + + MI +
Sbjct: 920 EYYGEATL----TISNIEHTDLQSSFSCVAMNEMGNTRTTVTLRLKKKSGPNVLMIAGFL 1087
Query: 344 TLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDC 403
+ + SV +Y+ F++DIVL YRD + +K DGK YDAY++YP++ +T
Sbjct: 1088VFLMSVAVSVVLYQSFRVDIVLLYRD-LFQAYSVK-DDGKIYDAYVIYPRSHSTEATF-V 1258
Query: 404 DIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSW 463
+ FV++++P++LE +CGY L IYGRD Y GED I + ++KSRRLII+L ++
Sbjct: 1259EYFVYQIMPDILENKCGYTLCIYGRDTYPGEDKANAIEKRIQKSRRLIILLTQQLINCQE 1438
Query: 464 LGGSSEEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGP 523
L + ++ IA+YNAL+Q+ KV+LLE+EK+ YE + ES+++I ++ G ++W T P
Sbjct: 1439L--NYDQHIALYNALIQNDTKVILLEMEKMGSYENLQESLRYIIKQQGTVKWKEQHTVHP 1612
Query: 524 QSAKTRFWKNVRYHMPVQRRSPSS 547
QS+ ++FWK+VRYHMPV RS S
Sbjct: 1613QSSNSKFWKHVRYHMPVTLRSSDS 1684
>gb|U04317.1|RNU04317 Rattus norvegicus Fit-1M (Fit-1) mRNA, complete cds
Length = 2065
Score = 229 bits (585), Expect = 4e-58
Identities = 157/536 (29%), Positives = 262/536 (48%), Gaps = 27/536 (5%)
Frame = +2
Query: 37 NEIDVRPCP-----LNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDS 91
NE + CP +NP E WY ++ + T++ +RI +++L F+PAKVEDS
Sbjct: 377 NEALIVRCPQRGGAINPVE------WYYSNTNERIPTQKRNRIFVSRDRLKFLPAKVEDS 538
Query: 92 GHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNE 151
G Y CV+R+ ++ + PN ++ + + CP + +
Sbjct: 539 GIYTCVIRSPESIKTGSLNVTIYKRPPNCKIPDYMMYSTVDGSDKNSKITCPTIALY--- 709
Query: 152 NNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITR 211
N +QW+K+CK L F L + V+ G+YTC ++T G Y +T
Sbjct: 710 -NWTAPVQWFKNCKAL--QGPRFRAHMSYLFIDKVSHVDEGDYTCRFTHTENGTNYIVTA 880
Query: 212 VIEFITLEENKPTRPVIVSPA-NETMEVDLGSQIQLICNV---TGQLSDIAYWKWNGSVI 267
F E+ T PVI +P N T+EV++G + C+ T W+ N + I
Sbjct: 881 TRSFTVEEKGFSTFPVITNPPHNYTVEVEIGKTANIACSACFGTASQFVAVLWQINKTRI 1060
Query: 268 DEDDPVLGEDYYSVENPANKRRST----LITVLNISEIESRFYKHPFTCFAKNTHGIDAA 323
G+ E NK S L ++L I+ + + + + C A N HG+
Sbjct: 1061GS----FGKARIQEEKGPNKSSSNGMICLTSLLRITGVTDKDFSLKYDCVAMNHHGVIRH 1228
Query: 324 YIQLI--YPVTNFQKH-MIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKA- 379
++L P+ + + ++ C L + I V + K+F I++ L++RD P K
Sbjct: 1229PVRLRRKQPIDHQSTYYIVAGCSLLLMFINVLVIVLKVFWIEVALFWRDI---MAPYKTQ 1399
Query: 380 SDGKTYDAYILYPKTV--GEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIV 437
+DGK YDAYI+YP+ T + FV LP+VLE +CGYKL IYGRD G+D
Sbjct: 1400NDGKLYDAYIIYPRVFRGSAAGTGSVEYFVHYTLPDVLENKCGYKLCIYGRDLLPGQDAA 1579
Query: 438 EVINENVKKSRRLIIIL---VRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQ 494
V+ +++ SRR + +L + + F++ E++IA+++AL+Q+ KV+L+E+E +
Sbjct: 1580TVVESSIQNSRRQVFVLAPHMMHSKEFAY-----EQEIALHSALIQNNSKVILIEMEPMG 1744
Query: 495 DYEK-----MPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQRRSP 545
+ + + +S++ + + G I+W D QS ++FWK+VRY MPV +R P
Sbjct: 1745EASRLQLGDLQDSLQHLVKMQGTIKWREDHVADKQSLSSKFWKHVRYQMPVPKRPP 1912
>dbj|D13695.1|MUSST2L Mus musculus mRNA for ST2L protein, complete cds
Length = 4989
Score = 227 bits (578), Expect = 3e-57
Identities = 151/514 (29%), Positives = 258/514 (49%), Gaps = 24/514 (4%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+ WY D+ + T++ +RI +++L F+PA+VEDSG Y CV+R+ + ++
Sbjct: 196 VEWYYSDTNESIPTQKRNRIFVSRDRLKFLPARVEDSGIYACVIRSPNLNKTGYLNVTIH 375
Query: 115 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
+ P+ ++ + + CP ++ + N +QW+K+CK L F
Sbjct: 376 KKPPSCNIPDYLMYSTVRGSDKNFKITCPTIDLY----NWTAPVQWFKNCKAL--QEPRF 537
Query: 175 SGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA-N 233
+ L + NV G+YTC ++ G Y +T F E+ PVI +P N
Sbjct: 538 RAHRSYLFIDNVTHDDEGDYTCQFTHAENGTNYIVTATRSFTVEEKGFSMFPVITNPPYN 717
Query: 234 ETMEVDLGSQIQLICNV-----TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKR 288
TMEV++G + C+ + L+D+ W+ N +V+ GE E N+
Sbjct: 718 HTMEVEIGKPASIACSACFGKGSHFLADVL-WQINKTVVGN----FGEARIQEEEGRNES 882
Query: 289 RST----LITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLI--YPVTNFQ-KHMIGI 341
S L +VL I+ + + + C A N HG+ I+L P+ + +++
Sbjct: 883 SSNDMDCLTSVLRITGVTEKDLSLEYDCLALNLHGMIRHTIRLRRKQPIDHRSIYYIVAG 1062
Query: 342 CVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKA-SDGKTYDAYILYPKTV--GEG 398
C L + I V + K+F I++ L++RD P K +DGK YDAYI+YP+
Sbjct: 1063CSLLLMFINVLVIVLKVFWIEVALFWRDIV---TPYKTRNDGKLYDAYIIYPRVFRGSAA 1233
Query: 399 STSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIIL---V 455
T + FV LP+VLE +CGYKL IYGRD G+D V+ +++ SRR + +L +
Sbjct: 1234GTHSVEYFVHHTLPDVLENKCGYKLCIYGRDLLPGQDAATVVESSIQNSRRQVFVLAPHM 1413
Query: 456 RETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQDYEK-----MPESIKFIKQKH 510
+ F++ E++IA+++AL+Q+ KV+L+E+E + + + + +S++ + +
Sbjct: 1414MHSKEFAY-----EQEIALHSALIQNNSKVILIEMEPLGEASRLQVGDLQDSLQHLVKIQ 1578
Query: 511 GAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQRRS 544
G I+W D QS ++FWK+VRY MPV R+
Sbjct: 1579GTIKWREDHVADKQSLSSKFWKHVRYQMPVPERA 1680
>dbj|AB012701.2|AB012701 Homo sapiens mRNA for ST2L, 5' noncoding region including distal
exon (exon 1a), complete cds
Length = 2058
Score = 224 bits (572), Expect = 1e-56
Identities = 156/546 (28%), Positives = 266/546 (48%), Gaps = 23/546 (4%)
Frame = +2
Query: 37 NEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYC 96
NE + CP + T+ WY + + T++ +R+ + L F+PA+V DSG Y C
Sbjct: 356 NEALIVRCP-RQGKPSYTVDWYYSQTNKSIPTQERNRVFASGQLLKFLPAEVADSGIYTC 532
Query: 97 VVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELP 156
+VR+ ++ + + + + ++ + + CP ++ + N
Sbjct: 533 IVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYSTVSGSEKNSKIYCPTIDLY----NWTA 700
Query: 157 KLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFI 216
L+W+K+C+ L + K L++ NV + G+YTC + G Y +T F
Sbjct: 701 PLEWFKNCQAL--QGSRYRAHKSFLVIDNVMTEDAGDYTCKFIHNENGANYSVTATRSFT 874
Query: 217 TLEENKPTR-PVIVSPA-NETMEVDLGSQIQLICNVT----GQLSDIAYWKWNGSVIDED 270
+E + PVI +PA NE EV++G L C+ Q W+ NG+ I +
Sbjct: 875 VKDEQGFSLFPVIGAPAQNEIKEVEIGKNANLTCSACFGKGTQFLAAVLWQLNGTKITD- 1051
Query: 271 DPVLGEDYYSVENPANKRRST----LITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQ 326
GE E N+ S L VL I++++ + C A N HG+ ++
Sbjct: 1052---FGEPRIQQEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQYDCLALNLHGLRRHTVR 1222
Query: 327 LIY--PVTNFQKH-MIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGK 383
L P+ + + +I +C ++I V I K+F I+ L +RD + +DGK
Sbjct: 1223LSRKNPIDHHSIYCIIAVCSVFLMLINVLVIILKMFWIEATLLWRDIAKPYKT--RNDGK 1396
Query: 384 TYDAYILYPKTVGEGS--TSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVIN 441
YDAY++YP+ + S + FV ++LP+VLE +CGY L IYGRD GED+V +
Sbjct: 1397LYDAYVVYPRNYKSSTDGASRVEHFVHQILPDVLENKCGYTLCIYGRDMLPGEDVVTAVE 1576
Query: 442 ENVKKSRRLIIIL---VRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQDY-- 496
N++KSRR I IL + F++ E+++A++ AL+Q+ KV+L+E+E + +
Sbjct: 1577TNIRKSRRHIFILTPQITHNKEFAY-----EQEVALHCALIQNDAKVILIEMEALSELDM 1741
Query: 497 ---EKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQLLS 553
E + +S++ + + G I+W D +S ++FWK+VRY MPV + P K L+
Sbjct: 1742LQAEALQDSLQHLMKVQGTIKWREDHIANKRSLNSKFWKHVRYQMPVPSKIP-RKASSLT 1918
Query: 554 PATKEK 559
P +K
Sbjct: 1919PLAAQK 1936
>ref|NM_016232.2| Homo sapiens interleukin 1 receptor-like 1 (IL1RL1), mRNA
Length = 1671
Score = 224 bits (572), Expect = 1e-56
Identities = 156/546 (28%), Positives = 266/546 (48%), Gaps = 23/546 (4%)
Frame = +1
Query: 37 NEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYC 96
NE + CP + T+ WY + + T++ +R+ + L F+PA+V DSG Y C
Sbjct: 85 NEALIVRCP-RQGKPSYTVDWYYSQTNKSIPTQERNRVFASGQLLKFLPAEVADSGIYTC 261
Query: 97 VVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELP 156
+VR+ ++ + + + + ++ + + CP ++ + N
Sbjct: 262 IVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYSTVSGSEKNSKIYCPTIDLY----NWTA 429
Query: 157 KLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFI 216
L+W+K+C+ L + K L++ NV + G+YTC + G Y +T F
Sbjct: 430 PLEWFKNCQAL--QGSRYRAHKSFLVIDNVMTEDAGDYTCKFIHNENGANYSVTATRSFT 603
Query: 217 TLEENKPTR-PVIVSPA-NETMEVDLGSQIQLICNVT----GQLSDIAYWKWNGSVIDED 270
+E + PVI +PA NE EV++G L C+ Q W+ NG+ I +
Sbjct: 604 VKDEQGFSLFPVIGAPAQNEIKEVEIGKNANLTCSACFGKGTQFLAAVLWQLNGTKITD- 780
Query: 271 DPVLGEDYYSVENPANKRRST----LITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQ 326
GE E N+ S L VL I++++ + C A N HG+ ++
Sbjct: 781 ---FGEPRIQQEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQYDCLALNLHGLRRHTVR 951
Query: 327 LIY--PVTNFQKH-MIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGK 383
L P+ + + +I +C ++I V I K+F I+ L +RD + +DGK
Sbjct: 952 LSRKNPIDHHSIYCIIAVCSVFLMLINVLVIILKMFWIEATLLWRDIAKPYKT--RNDGK 1125
Query: 384 TYDAYILYPKTVGEGS--TSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVIN 441
YDAY++YP+ + S + FV ++LP+VLE +CGY L IYGRD GED+V +
Sbjct: 1126LYDAYVVYPRNYKSSTDGASRVEHFVHQILPDVLENKCGYTLCIYGRDMLPGEDVVTAVE 1305
Query: 442 ENVKKSRRLIIIL---VRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQDY-- 496
N++KSRR I IL + F++ E+++A++ AL+Q+ KV+L+E+E + +
Sbjct: 1306TNIRKSRRHIFILTPQITHNKEFAY-----EQEVALHCALIQNDAKVILIEMEALSELDM 1470
Query: 497 ---EKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQLLS 553
E + +S++ + + G I+W D +S ++FWK+VRY MPV + P K L+
Sbjct: 1471LQAEALQDSLQHLMKVQGTIKWREDHIANKRSLNSKFWKHVRYQMPVPSKIP-RKASSLT 1647
Query: 554 PATKEK 559
P +K
Sbjct: 1648PLAAQK 1665
>dbj|AB041739.2|AB041739 Gallus gallus mRNA for ST2LV, complete cds
Length = 2830
Score = 216 bits (549), Expect = 6e-54
Identities = 143/503 (28%), Positives = 243/503 (47%), Gaps = 10/503 (1%)
Frame = +2
Query: 55 ITWYKDDSKTPV-STEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRI-KISAK 112
+TW+ ++ + E+ SR+ LWF+P +EDSG+Y CV+ + K++ +
Sbjct: 227 VTWHHTGTRKRIPEEEEGSRVFSKGIFLWFLPTSLEDSGNYTCVINYPDGSKKERKMNVQ 406
Query: 113 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI 172
+ C+ ++ ++ + G + CP ++N +QWYKDC+P+ +
Sbjct: 407 VHPYKQGTCFPSRILYANE---TRKGKISCPTFRNYENATI----IQWYKDCRPIQGERY 565
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA 232
+ + N+ ++ G YTC +YT+ G+ + ++ F++ ++ I+ P
Sbjct: 566 FMHD--PYIFIENLNKEDDGYYTCQFTYTHRGRVFNVSATRIFVSEAKHSSLPVQILFPK 739
Query: 233 NE-TMEVDLGSQIQLICN----VTGQLSDIAYWKWN---GSVIDEDDPVLGEDYYSVENP 284
+E +EV+LG+ L C + Q + W N DE+ Y+ ++
Sbjct: 740 DEDVLEVELGAAFSLKCQARLGIKKQPIAVVTWDVNKMPAEYADEEKIRQEFSYFEGQHQ 919
Query: 285 ANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVT 344
+TL IS IE + F+C A N G T
Sbjct: 920 EYYGEATL----TISNIEHTDLQSSFSCVAMNEMGN-----------------------T 1018
Query: 345 LTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCD 404
T + L +K GK YDAY++YP++ +T +
Sbjct: 1019RTTVT-------------------------LRLKKKYGKIYDAYVIYPRSHSTEATF-VE 1120
Query: 405 IFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWL 464
FV++++P++LE +CGY L IYGRD Y GED I + ++KSRRLII+L ++ L
Sbjct: 1121YFVYQIMPDILENKCGYTLCIYGRDTYPGEDKANAIEKRIQKSRRLIILLTQQLINCQEL 1300
Query: 465 GGSSEEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQ 524
+ ++ IA+YNAL+Q+ KV+LLE+EK+ YE + ES+++I ++ G ++W T PQ
Sbjct: 1301--NYDQHIALYNALIQNDTKVILLEMEKMGSYENLQESLRYIIKQQGTVKWKEQHTVHPQ 1474
Query: 525 SAKTRFWKNVRYHMPVQRRSPSS 547
S+ ++FWK+VRYHMPV RS S
Sbjct: 1475SSNSKFWKHVRYHMPVTLRSSDS 1543
>dbj|AK026803.1|AK026803 Homo sapiens cDNA: FLJ23150 fis, clone LNG09358
Length = 1897
Score = 214 bits (546), Expect = 1e-53
Identities = 106/106 (100%), Positives = 106/106 (100%)
Frame = +1
Query: 435 DIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQ 494
DIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQ
Sbjct: 1543 DIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQ 1722
Query: 495 DYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPV 540
DYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPV
Sbjct: 1723 DYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPV 1860
Score = 120 bits (302), Expect = 3e-25
Identities = 56/56 (100%), Positives = 56/56 (100%)
Frame = +2
Query: 379 ASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGE 434
ASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGE
Sbjct: 668 ASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGE 835
>ref|NM_030688.1| Mus musculus interkeukin 1 receptor accessory protein-like 2
(Il1rapl2), mRNA
Length = 2518
Score = 213 bits (541), Expect = 5e-53
Identities = 153/523 (29%), Positives = 261/523 (49%), Gaps = 22/523 (4%)
Frame = +1
Query: 55 ITWY--KDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 112
+ WY K D + P+ + R+ + ++ +WF A+ +DSG Y CV+RNS+YC+++ +S
Sbjct: 340 LMWYRNKGDLEEPIIFSEV-RMSKEEDAIWFHSAEEQDSGFYTCVLRNSTYCMKVSMSLT 516
Query: 113 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI 172
ENE LCYN++ + +K V + CP M+ FK + E P + WYK+CKP + +I
Sbjct: 517 VAENESGLCYNSRIRYLEKSEVTKRKEISCPDMDDFKKSDQE-PDVVWYKECKPKMWRSI 693
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI-VSP 231
+ L++ V E+ GNYTC Y GK T ++ L +KP +P+ +
Sbjct: 694 IIQ-KGNALLIQEVQEEDGGNYTCELKYE--GKLVRRTTELKVTALLTDKPPKPLFPMEN 864
Query: 232 ANETMEVDLGSQIQLICNV----TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANK 287
++V LG + + C +G+ + YW I+E + E +
Sbjct: 865 QPSVIDVQLGKPLNIPCKAFFGFSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLG 1044
Query: 288 RRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTV 347
+ +T++ S +E+ +TC +N +G A + L ++ + G + +
Sbjct: 1045EKEVELTLIFDSVVEADLAN--YTCHVENRNGRKHASVLLRKKDLIYKIELAGGLGAIFL 1218
Query: 348 IIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCD--- 404
+++ + +YK + I+++L+YR D K YDAY+ Y K + T DCD
Sbjct: 1219LLILLLVVYKCYNIELMLFYRQRFGG--DETTDDNKEYDAYLSYTKV--DQDTLDCDNTE 1386
Query: 405 --IFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFS 462
F ++LP+VLEK GYKLFI RD +E + V++SRRLII+L T +
Sbjct: 1387EEQFALEILPDVLEKHYGYKLFIPERDLIPSGTYIEDLTRCVEQSRRLIIVL---TPDYI 1557
Query: 463 WLGGSS--EEQIAMYNALVQDGIKVVLLELEKI------QDYEKMPESIKFIKQKHGAIR 514
G S E + ++N LV IKV+L+E ++ Q+ E + +IK + I+
Sbjct: 1558LRRGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKHNIKLL----SLIK 1725
Query: 515 WSGDFTQGPQSAK--TRFWKNVRYHMPVQRRSPSSKHQLLSPA 555
W +GP+S+K ++FWK++ Y MP++++ S +L A
Sbjct: 1726W-----KGPKSSKLNSKFWKHLVYEMPIKKKEMLSHCHVLDSA 1839
>gb|AF284437.1|AF284437 Mus musculus TIGIRR-1 mRNA, complete cds
Length = 2518
Score = 213 bits (541), Expect = 5e-53
Identities = 153/523 (29%), Positives = 261/523 (49%), Gaps = 22/523 (4%)
Frame = +1
Query: 55 ITWY--KDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 112
+ WY K D + P+ + R+ + ++ +WF A+ +DSG Y CV+RNS+YC+++ +S
Sbjct: 340 LMWYRNKGDLEEPIIFSEV-RMSKEEDAIWFHSAEEQDSGFYTCVLRNSTYCMKVSMSLT 516
Query: 113 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI 172
ENE LCYN++ + +K V + CP M+ FK + E P + WYK+CKP + +I
Sbjct: 517 VAENESGLCYNSRIRYLEKSEVTKRKEISCPDMDDFKKSDQE-PDVVWYKECKPKMWRSI 693
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI-VSP 231
+ L++ V E+ GNYTC Y GK T ++ L +KP +P+ +
Sbjct: 694 IIQ-KGNALLIQEVQEEDGGNYTCELKYE--GKLVRRTTELKVTALLTDKPPKPLFPMEN 864
Query: 232 ANETMEVDLGSQIQLICNV----TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANK 287
++V LG + + C +G+ + YW I+E + E +
Sbjct: 865 QPSVIDVQLGKPLNIPCKAFFGFSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLG 1044
Query: 288 RRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTV 347
+ +T++ S +E+ +TC +N +G A + L ++ + G + +
Sbjct: 1045EKEVELTLIFDSVVEADLAN--YTCHVENRNGRKHASVLLRKKDLIYKIELAGGLGAIFL 1218
Query: 348 IIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCD--- 404
+++ + +YK + I+++L+YR D K YDAY+ Y K + T DCD
Sbjct: 1219LLILLLVVYKCYNIELMLFYRQRFGG--DETTDDNKEYDAYLSYTKV--DQDTLDCDNTE 1386
Query: 405 --IFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFS 462
F ++LP+VLEK GYKLFI RD +E + V++SRRLII+L T +
Sbjct: 1387EEQFALEILPDVLEKHYGYKLFIPERDLIPSGTYIEDLTRCVEQSRRLIIVL---TPDYI 1557
Query: 463 WLGGSS--EEQIAMYNALVQDGIKVVLLELEKI------QDYEKMPESIKFIKQKHGAIR 514
G S E + ++N LV IKV+L+E ++ Q+ E + +IK + I+
Sbjct: 1558LRRGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKHNIKLL----SLIK 1725
Query: 515 WSGDFTQGPQSAK--TRFWKNVRYHMPVQRRSPSSKHQLLSPA 555
W +GP+S+K ++FWK++ Y MP++++ S +L A
Sbjct: 1726W-----KGPKSSKLNSKFWKHLVYEMPIKKKEMLSHCHVLDSA 1839
>ref|NM_017416.1| Homo sapiens interleukin 1 receptor accessory protein-like 2
(IL1RAPL2), mRNA
Length = 2985
Score = 212 bits (540), Expect = 7e-53
Identities = 153/521 (29%), Positives = 257/521 (48%), Gaps = 20/521 (3%)
Frame = +1
Query: 55 ITWYKD--DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 112
+ WYK+ D + P+ + R+ + ++ +WF A+ +DSG Y CV+RNS+YC+++ +S
Sbjct: 976 LMWYKNKGDLEEPIIFSEV-RMSKEEDSIWFHSAEAQDSGFYTCVLRNSTYCMKVSMSLT 1152
Query: 113 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI 172
ENE LCYN++ + +K V + CP M+ FK + E P + WYK+CKP + +I
Sbjct: 1153 VAENESGLCYNSRIRYLEKSEVTKRKEISCPDMDDFKKSDQE-PDVVWYKECKPKMWRSI 1329
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI-VSP 231
+ L++ V E+ GNYTC Y GK T ++ L +KP +P+ +
Sbjct: 1330 IIQ-KGNALLIQEVQEEDGGNYTCELKYE--GKLVRRTTELKVTALLTDKPPKPLFPMEN 1500
Query: 232 ANETMEVDLGSQIQLICNV----TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANK 287
++V LG + + C +G+ + YW I+E + E +
Sbjct: 1501 QPSVIDVQLGKPLNIPCKAFFGFSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLG 1680
Query: 288 RRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTV 347
+ + ++ S +E+ +TC +N +G A + L ++ + G + +
Sbjct: 1681 EKEVELALIFDSVVEADLAN--YTCHVENRNGRKHASVLLRKKDLIYKIELAGGLGAIFL 1854
Query: 348 IIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCD--- 404
++V V IYK + I+++L+YR + D K YDAY+ Y K + T DCD
Sbjct: 1855 LLVLLVVIYKCYNIELMLFYRQ--HFGADETNDDNKEYDAYLSYTKV--DQDTLDCDNPE 2022
Query: 405 --IFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFS 462
F +VLP+VLEK GYKLFI RD +E + V++SRRLII+L T +
Sbjct: 2023 EEQFALEVLPDVLEKHYGYKLFIPERDLIPSGTYMEDLTRYVEQSRRLIIVL---TPDYI 2193
Query: 463 WLGGSS--EEQIAMYNALVQDGIKVVLLELEKI------QDYEKMPESIKFIKQKHGAIR 514
G S E + ++N LV IKV+L+E ++ Q+ E + SIK + I+
Sbjct: 2194 LRRGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLL----SLIK 2361
Query: 515 WSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQLLSPA 555
W G + ++FWK++ Y MP++++ + +L A
Sbjct: 2362 WKGSKS---SKLNSKFWKHLVYEMPIKKKEMLPRCHVLDSA 2475
>emb|AJ272208.1|HSA272208 Homo sapiens mRNA for IL-1 receptor accessory protein-like 2
(IL1RAPL-2 gene)
Length = 2985
Score = 212 bits (540), Expect = 7e-53
Identities = 153/521 (29%), Positives = 257/521 (48%), Gaps = 20/521 (3%)
Frame = +1
Query: 55 ITWYKD--DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 112
+ WYK+ D + P+ + R+ + ++ +WF A+ +DSG Y CV+RNS+YC+++ +S
Sbjct: 976 LMWYKNKGDLEEPIIFSEV-RMSKEEDSIWFHSAEAQDSGFYTCVLRNSTYCMKVSMSLT 1152
Query: 113 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI 172
ENE LCYN++ + +K V + CP M+ FK + E P + WYK+CKP + +I
Sbjct: 1153 VAENESGLCYNSRIRYLEKSEVTKRKEISCPDMDDFKKSDQE-PDVVWYKECKPKMWRSI 1329
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI-VSP 231
+ L++ V E+ GNYTC Y GK T ++ L +KP +P+ +
Sbjct: 1330 IIQ-KGNALLIQEVQEEDGGNYTCELKYE--GKLVRRTTELKVTALLTDKPPKPLFPMEN 1500
Query: 232 ANETMEVDLGSQIQLICNV----TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANK 287
++V LG + + C +G+ + YW I+E + E +
Sbjct: 1501 QPSVIDVQLGKPLNIPCKAFFGFSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLG 1680
Query: 288 RRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTV 347
+ + ++ S +E+ +TC +N +G A + L ++ + G + +
Sbjct: 1681 EKEVELALIFDSVVEADLAN--YTCHVENRNGRKHASVLLRKKDLIYKIELAGGLGAIFL 1854
Query: 348 IIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCD--- 404
++V V IYK + I+++L+YR + D K YDAY+ Y K + T DCD
Sbjct: 1855 LLVLLVVIYKCYNIELMLFYRQ--HFGADETNDDNKEYDAYLSYTKV--DQDTLDCDNPE 2022
Query: 405 --IFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFS 462
F +VLP+VLEK GYKLFI RD +E + V++SRRLII+L T +
Sbjct: 2023 EEQFALEVLPDVLEKHYGYKLFIPERDLIPSGTYMEDLTRYVEQSRRLIIVL---TPDYI 2193
Query: 463 WLGGSS--EEQIAMYNALVQDGIKVVLLELEKI------QDYEKMPESIKFIKQKHGAIR 514
G S E + ++N LV IKV+L+E ++ Q+ E + SIK + I+
Sbjct: 2194 LRRGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLL----SLIK 2361
Query: 515 WSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQLLSPA 555
W G + ++FWK++ Y MP++++ + +L A
Sbjct: 2362 WKGSKS---SKLNSKFWKHLVYEMPIKKKEMLPRCHVLDSA 2475
>emb|AJ290436.1|HSA290436 Homo sapiens mRNA for IL1RAPL-2 related protein
Length = 2080
Score = 212 bits (540), Expect = 7e-53
Identities = 153/521 (29%), Positives = 257/521 (48%), Gaps = 20/521 (3%)
Frame = +2
Query: 55 ITWYKD--DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 112
+ WYK+ D + P+ + R+ + ++ +WF A+ +DSG Y CV+RNS+YC+++ +S
Sbjct: 239 LMWYKNKGDLEEPIIFSEV-RMSKEEDSIWFHSAEAQDSGFYTCVLRNSTYCMKVSMSLT 415
Query: 113 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI 172
ENE LCYN++ + +K V + CP M+ FK + E P + WYK+CKP + +I
Sbjct: 416 VAENESGLCYNSRIRYLEKSEVTKRKEISCPDMDDFKKSDQE-PDVVWYKECKPKMWRSI 592
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI-VSP 231
+ L++ V E+ GNYTC Y GK T ++ L +KP +P+ +
Sbjct: 593 IIQ-KGNALLIQEVQEEDGGNYTCELKYE--GKLVRRTTELKVTALLTDKPPKPLFPMEN 763
Query: 232 ANETMEVDLGSQIQLICNV----TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANK 287
++V LG + + C +G+ + YW I+E + E +
Sbjct: 764 QPSVIDVQLGKPLNIPCKAFFGFSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLG 943
Query: 288 RRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTV 347
+ + ++ S +E+ +TC +N +G A + L ++ + G + +
Sbjct: 944 EKEVELALIFDSVVEADLAN--YTCHVENRNGRKHASVLLRKKDLIYKIELAGGLGAIFL 1117
Query: 348 IIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCD--- 404
++V V IYK + I+++L+YR + D K YDAY+ Y K + T DCD
Sbjct: 1118LLVLLVVIYKCYNIELMLFYRQ--HFGADETNDDNKEYDAYLSYTKV--DQDTLDCDNPE 1285
Query: 405 --IFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFS 462
F +VLP+VLEK GYKLFI RD +E + V++SRRLII+L T +
Sbjct: 1286EEQFALEVLPDVLEKHYGYKLFIPERDLIPSGTYMEDLTRYVEQSRRLIIVL---TPDYI 1456
Query: 463 WLGGSS--EEQIAMYNALVQDGIKVVLLELEKI------QDYEKMPESIKFIKQKHGAIR 514
G S E + ++N LV IKV+L+E ++ Q+ E + SIK + I+
Sbjct: 1457LRRGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLL----SLIK 1624
Query: 515 WSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQLLSPA 555
W G + ++FWK++ Y MP++++ + +L A
Sbjct: 1625WKGSKS---SKLNSKFWKHLVYEMPIKKKEMLPRCHVLDSA 1738
>gb|AF284436.1|AF284436 Homo sapiens TIGIRR-1 mRNA, complete cds
Length = 2212
Score = 212 bits (540), Expect = 7e-53
Identities = 153/521 (29%), Positives = 257/521 (48%), Gaps = 20/521 (3%)
Frame = +2
Query: 55 ITWYKD--DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 112
+ WYK+ D + P+ + R+ + ++ +WF A+ +DSG Y CV+RNS+YC+++ +S
Sbjct: 371 LMWYKNKGDLEEPIIFSEV-RMSKEEDSIWFHSAEAQDSGFYTCVLRNSTYCMKVSMSLT 547
Query: 113 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI 172
ENE LCYN++ + +K V + CP M+ FK + E P + WYK+CKP + +I
Sbjct: 548 VAENESGLCYNSRIRYLEKSEVTKRKEISCPDMDDFKKSDQE-PDVVWYKECKPKMWRSI 724
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI-VSP 231
+ L++ V E+ GNYTC Y GK T ++ L +KP +P+ +
Sbjct: 725 IIQ-KGNALLIQEVQEEDGGNYTCELKYE--GKLVRRTTELKVTALLTDKPPKPLFPMEN 895
Query: 232 ANETMEVDLGSQIQLICNV----TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANK 287
++V LG + + C +G+ + YW I+E + E +
Sbjct: 896 QPSVIDVQLGKPLNIPCKAFFGFSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLG 1075
Query: 288 RRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTV 347
+ + ++ S +E+ +TC +N +G A + L ++ + G + +
Sbjct: 1076EKEVELALIFDSVVEADLAN--YTCHVENRNGRKHASVLLRKKDLIYKIELAGGLGAIFL 1249
Query: 348 IIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCD--- 404
++V V IYK + I+++L+YR + D K YDAY+ Y K + T DCD
Sbjct: 1250LLVLLVVIYKCYNIELMLFYRQ--HFGADETNDDNKEYDAYLSYTKV--DQDTLDCDNPE 1417
Query: 405 --IFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFS 462
F +VLP+VLEK GYKLFI RD +E + V++SRRLII+L T +
Sbjct: 1418EEQFALEVLPDVLEKHYGYKLFIPERDLIPSGTYMEDLTRYVEQSRRLIIVL---TPDYI 1588
Query: 463 WLGGSS--EEQIAMYNALVQDGIKVVLLELEKI------QDYEKMPESIKFIKQKHGAIR 514
G S E + ++N LV IKV+L+E ++ Q+ E + SIK + I+
Sbjct: 1589LRRGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLL----SLIK 1756
Query: 515 WSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQLLSPA 555
W G + ++FWK++ Y MP++++ + +L A
Sbjct: 1757WKGSKS---SKLNSKFWKHLVYEMPIKKKEMLPRCHVLDSA 1870
>gb|AF212016.1|AF212016 Homo sapiens interleukin-1 receptor 9 (IL1R9) mRNA, complete cds
Length = 2061
Score = 212 bits (540), Expect = 7e-53
Identities = 153/521 (29%), Positives = 257/521 (48%), Gaps = 20/521 (3%)
Frame = +1
Query: 55 ITWYKD--DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 112
+ WYK+ D + P+ + R+ + ++ +WF A+ +DSG Y CV+RNS+YC+++ +S
Sbjct: 220 LMWYKNKGDLEEPIIFSEV-RMSKEEDSIWFHSAEAQDSGFYTCVLRNSTYCMKVSMSLT 396
Query: 113 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI 172
ENE LCYN++ + +K V + CP M+ FK + E P + WYK+CKP + +I
Sbjct: 397 VAENESGLCYNSRIRYLEKSEVTKRKEISCPDMDDFKKSDQE-PDVVWYKECKPKMWRSI 573
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI-VSP 231
+ L++ V E+ GNYTC Y GK T ++ L +KP +P+ +
Sbjct: 574 IIQ-KGNALLIQEVQEEDGGNYTCELKYE--GKLVRRTTELKVTALLTDKPPKPLFPMEN 744
Query: 232 ANETMEVDLGSQIQLICNV----TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANK 287
++V LG + + C +G+ + YW I+E + E +
Sbjct: 745 QPSVIDVQLGKPLNIPCKAFFGFSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLG 924
Query: 288 RRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTV 347
+ + ++ S +E+ +TC +N +G A + L ++ + G + +
Sbjct: 925 EKEVELALIFDSVVEADLAN--YTCHVENRNGRKHASVLLRKKDLIYKIELAGGLGAIFL 1098
Query: 348 IIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCD--- 404
++V V IYK + I+++L+YR + D K YDAY+ Y K + T DCD
Sbjct: 1099LLVLLVVIYKCYNIELMLFYRQ--HFGADETNDDNKEYDAYLSYTKV--DQDTLDCDNPE 1266
Query: 405 --IFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFS 462
F +VLP+VLEK GYKLFI RD +E + V++SRRLII+L T +
Sbjct: 1267EEQFALEVLPDVLEKHYGYKLFIPERDLIPSGTYMEDLTRYVEQSRRLIIVL---TPDYI 1437
Query: 463 WLGGSS--EEQIAMYNALVQDGIKVVLLELEKI------QDYEKMPESIKFIKQKHGAIR 514
G S E + ++N LV IKV+L+E ++ Q+ E + SIK + I+
Sbjct: 1438LRRGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLL----SLIK 1605
Query: 515 WSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQLLSPA 555
W G + ++FWK++ Y MP++++ + +L A
Sbjct: 1606WKGSKS---SKLNSKFWKHLVYEMPIKKKEMLPRCHVLDSA 1719
>gb|AF181285.1|AF181285 Homo sapiens X-linked interleukin-1 receptor accessory protein-like
2 (IL1RAPL2) mRNA, partial cds
Length = 1979
Score = 212 bits (540), Expect = 7e-53
Identities = 153/521 (29%), Positives = 257/521 (48%), Gaps = 20/521 (3%)
Frame = +3
Query: 55 ITWYKD--DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 112
+ WYK+ D + P+ + R+ + ++ +WF A+ +DSG Y CV+RNS+YC+++ +S
Sbjct: 138 LMWYKNKGDLEEPIIFSEV-RMSKEEDSIWFHSAEAQDSGFYTCVLRNSTYCMKVSMSLT 314
Query: 113 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI 172
ENE LCYN++ + +K V + CP M+ FK + E P + WYK+CKP + +I
Sbjct: 315 VAENESGLCYNSRIRYLEKSEVTKRKEISCPDMDDFKKSDQE-PDVVWYKECKPKMWRSI 491
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI-VSP 231
+ L++ V E+ GNYTC Y GK T ++ L +KP +P+ +
Sbjct: 492 IIQ-KGNALLIQEVQEEDGGNYTCELKYE--GKLVRRTTELKVTALLTDKPPKPLFPMEN 662
Query: 232 ANETMEVDLGSQIQLICNV----TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANK 287
++V LG + + C +G+ + YW I+E + E +
Sbjct: 663 QPSVIDVQLGKPLNIPCKAFFGFSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLG 842
Query: 288 RRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTV 347
+ + ++ S +E+ +TC +N +G A + L ++ + G + +
Sbjct: 843 EKEVELALIFDSVVEADLAN--YTCHVENRNGRKHASVLLRKKDLIYKIELAGGLGAIFL 1016
Query: 348 IIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCD--- 404
++V V IYK + I+++L+YR + D K YDAY+ Y K + T DCD
Sbjct: 1017LLVLLVVIYKCYNIELMLFYRQ--HFGADETNDDNKEYDAYLSYTKV--DQDTLDCDNPE 1184
Query: 405 --IFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFS 462
F +VLP+VLEK GYKLFI RD +E + V++SRRLII+L T +
Sbjct: 1185EEQFALEVLPDVLEKHYGYKLFIPERDLIPSGTYMEDLTRYVEQSRRLIIVL---TPDYI 1355
Query: 463 WLGGSS--EEQIAMYNALVQDGIKVVLLELEKI------QDYEKMPESIKFIKQKHGAIR 514
G S E + ++N LV IKV+L+E ++ Q+ E + SIK + I+
Sbjct: 1356LRRGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLL----SLIK 1523
Query: 515 WSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQLLSPA 555
W G + ++FWK++ Y MP++++ + +L A
Sbjct: 1524WKGSKS---SKLNSKFWKHLVYEMPIKKKEMLPRCHVLDSA 1637
>ref|XM_034808.1| Homo sapiens interleukin 1 receptor accessory protein-like 2
(IL1RAPL2), mRNA
Length = 2152
Score = 212 bits (540), Expect = 7e-53
Identities = 153/521 (29%), Positives = 257/521 (48%), Gaps = 20/521 (3%)
Frame = +2
Query: 55 ITWYKD--DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 112
+ WYK+ D + P+ + R+ + ++ +WF A+ +DSG Y CV+RNS+YC+++ +S
Sbjct: 143 LMWYKNKGDLEEPIIFSEV-RMSKEEDSIWFHSAEAQDSGFYTCVLRNSTYCMKVSMSLT 319
Query: 113 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI 172
ENE LCYN++ + +K V + CP M+ FK + E P + WYK+CKP + +I
Sbjct: 320 VAENESGLCYNSRIRYLEKSEVTKRKEISCPDMDDFKKSDQE-PDVVWYKECKPKMWRSI 496
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI-VSP 231
+ L++ V E+ GNYTC Y GK T ++ L +KP +P+ +
Sbjct: 497 IIQ-KGNALLIQEVQEEDGGNYTCELKYE--GKLVRRTTELKVTALLTDKPPKPLFPMEN 667
Query: 232 ANETMEVDLGSQIQLICNV----TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANK 287
++V LG + + C +G+ + YW I+E + E +
Sbjct: 668 QPSVIDVQLGKPLNIPCKAFFGFSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLG 847
Query: 288 RRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTV 347
+ + ++ S +E+ +TC +N +G A + L ++ + G + +
Sbjct: 848 EKEVELALIFDSVVEADLAN--YTCHVENRNGRKHASVLLRKKDLIYKIELAGGLGAIFL 1021
Query: 348 IIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCD--- 404
++V V IYK + I+++L+YR + D K YDAY+ Y K + T DCD
Sbjct: 1022LLVLLVVIYKCYNIELMLFYRQ--HFGADETNDDNKEYDAYLSYTKV--DQDTLDCDNPE 1189
Query: 405 --IFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFS 462
F +VLP+VLEK GYKLFI RD +E + V++SRRLII+L T +
Sbjct: 1190EEQFALEVLPDVLEKHYGYKLFIPERDLIPSGTYMEDLTRYVEQSRRLIIVL---TPDYI 1360
Query: 463 WLGGSS--EEQIAMYNALVQDGIKVVLLELEKI------QDYEKMPESIKFIKQKHGAIR 514
G S E + ++N LV IKV+L+E ++ Q+ E + SIK + I+
Sbjct: 1361LRRGWSIFELESRLHNMLVSGEIKVILIECTELKGKVNCQEVESLKRSIKLL----SLIK 1528
Query: 515 WSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQLLSPA 555
W G + ++FWK++ Y MP++++ + +L A
Sbjct: 1529WKGSKS---SKLNSKFWKHLVYEMPIKKKEMLPRCHVLDSA 1642
>gb|AF284435.1|AF284435 Homo sapiens TIGIRR-2 mRNA, complete cds
Length = 2258
Score = 194 bits (494), Expect = 1e-47
Identities = 153/524 (29%), Positives = 257/524 (48%), Gaps = 25/524 (4%)
Frame = +1
Query: 54 TITWYKD----DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKI 109
++ WYK D + P++ + SR+ + ++ +WF P ++DSG Y CV+RNS+YC+++ I
Sbjct: 304 SLMWYKSSGPGDFEEPIAFD-GSRMSKEEDSIWFRPTLLQDSGLYACVIRNSTYCMKVSI 480
Query: 110 SAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCK-PLL 168
S EN+ LCYN++ + +K ++ + C +E F E P++ WYK+C+
Sbjct: 481 SLTVGENDTGLCYNSKMKYFEKAELSKSKEISCRDIEDFLLPTRE-PEILWYKECRTKTW 657
Query: 169 LDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI 228
+I F +D L++ V E GNYTC Y + + R E P +
Sbjct: 658 RPSIVFK--RDTLLIREVREDDIGNYTCELKY----GGFVVRRTTELTVTAPLTDKPPKL 819
Query: 229 VSPANETM---EVDLGSQIQLICNV----TGQLSDIAYW-KWNGSVIDEDDPVLGEDYYS 280
+ P + E LG L C +G +S + YW K + D D+ + E
Sbjct: 820 LYPMESKLTIQETQLGDSANLTCRAFFGYSGDVSPLIYWMKGEKFIEDLDENRVWESDIR 999
Query: 281 V--ENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHM 338
+ E+ + S + V ++ E + Y +C+ +N +G A + L + +
Sbjct: 1000ILKEHLGEQEVSISLIVDSVEEGDLGNY----SCYVENGNGRRHASVLLHKRELMYTVEL 1167
Query: 339 IGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGE- 397
G + +++VC V IYK +KI+I+L+YR+ + D K YDAY+ Y K +
Sbjct: 1168AGGLGAILLLLVCLVTIYKCYKIEIMLFYRN--HFGAEELDGDNKDYDAYLSYTKVDPDQ 1341
Query: 398 --GSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILV 455
T + + F ++LP++LEK GYKLFI RD +E + V +S+RLII++
Sbjct: 1342WNQETGEEERFALEILPDMLEKHYGYKLFIPDRDLIPTGTYIEDVARCVDQSKRLIIVM- 1518
Query: 456 RETSGFSWLGGSS--EEQIAMYNALVQDGIKVVLL---ELEKIQDYEKMPESIKFIKQKH 510
T + G S E + + N LV IKV+L+ EL I +Y+++ E++K +
Sbjct: 1519--TPNYVVRRGWSIFELETRLRNMLVTGEIKVILIECSELRGIMNYQEV-EALKHTIKLL 1689
Query: 511 GAIRWSGDFTQGPQSAK--TRFWKNVRYHMPVQRRSPSSKHQLL 552
I+W GP+ K ++FWK ++Y MP +R P + Q L
Sbjct: 1690TVIKW-----HGPKCNKLNSKFWKRLQYEMPFKRIEPITHEQAL 1806
>gb|AF181284.1|AF181284 Homo sapiens X-linked interleukin-1 receptor accessory protein-like 1
(IL1RAPL1) mRNA, complete cds
Length = 2722
Score = 194 bits (494), Expect = 1e-47
Identities = 153/524 (29%), Positives = 257/524 (48%), Gaps = 25/524 (4%)
Frame = +2
Query: 54 TITWYKD----DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKI 109
++ WYK D + P++ + SR+ + ++ +WF P ++DSG Y CV+RNS+YC+++ I
Sbjct: 848 SLMWYKSSGPGDFEEPIAFD-GSRMSKEEDSIWFRPTLLQDSGLYACVIRNSTYCMKVSI 1024
Query: 110 SAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCK-PLL 168
S EN+ LCYN++ + +K ++ + C +E F E P++ WYK+C+
Sbjct: 1025 SLTVGENDTGLCYNSKMKYFEKAELSKSKEISCRDIEDFLLPTRE-PEILWYKECRTKTW 1201
Query: 169 LDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI 228
+I F +D L++ V E GNYTC Y + + R E P +
Sbjct: 1202 RPSIVFK--RDTLLIREVREDDIGNYTCELKY----GGFVVRRTTELTVTAPLTDKPPKL 1363
Query: 229 VSPANETM---EVDLGSQIQLICNV----TGQLSDIAYW-KWNGSVIDEDDPVLGEDYYS 280
+ P + E LG L C +G +S + YW K + D D+ + E
Sbjct: 1364 LYPMESKLTIQETQLGDSANLTCRAFFGYSGDVSPLIYWMKGEKFIEDLDENRVWESDIR 1543
Query: 281 V--ENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHM 338
+ E+ + S + V ++ E + Y +C+ +N +G A + L + +
Sbjct: 1544 ILKEHLGEQEVSISLIVDSVEEGDLGNY----SCYVENGNGRRHASVLLHKRELMYTVEL 1711
Query: 339 IGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGE- 397
G + +++VC V IYK +KI+I+L+YR+ + D K YDAY+ Y K +
Sbjct: 1712 AGGLGAILLLLVCLVTIYKCYKIEIMLFYRN--HFGAEELDGDNKDYDAYLSYTKVDPDQ 1885
Query: 398 --GSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILV 455
T + + F ++LP++LEK GYKLFI RD +E + V +S+RLII++
Sbjct: 1886 WNQETGEEERFALEILPDMLEKHYGYKLFIPDRDLIPTGTYIEDVARCVDQSKRLIIVM- 2062
Query: 456 RETSGFSWLGGSS--EEQIAMYNALVQDGIKVVLL---ELEKIQDYEKMPESIKFIKQKH 510
T + G S E + + N LV IKV+L+ EL I +Y+++ E++K +
Sbjct: 2063 --TPNYVVRRGWSIFELETRLRNMLVTGEIKVILIECSELRGIMNYQEV-EALKHTIKLL 2233
Query: 511 GAIRWSGDFTQGPQSAK--TRFWKNVRYHMPVQRRSPSSKHQLL 552
I+W GP+ K ++FWK ++Y MP +R P + Q L
Sbjct: 2234 TVIKW-----HGPKCNKLNSKFWKRLQYEMPFKRIEPITHEQAL 2350
>ref|NM_014271.1| Homo sapiens interleukin 1 receptor accessory protein-like 1
(IL1RAPL1), mRNA
Length = 3504
Score = 194 bits (494), Expect = 1e-47
Identities = 153/524 (29%), Positives = 257/524 (48%), Gaps = 25/524 (4%)
Frame = +1
Query: 54 TITWYKD----DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKI 109
++ WYK D + P++ + SR+ + ++ +WF P ++DSG Y CV+RNS+YC+++ I
Sbjct: 727 SLMWYKSSGPGDFEEPIAFD-GSRMSKEEDSIWFRPTLLQDSGLYACVIRNSTYCMKVSI 903
Query: 110 SAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCK-PLL 168
S EN+ LCYN++ + +K ++ + C +E F E P++ WYK+C+
Sbjct: 904 SLTVGENDTGLCYNSKMKYFEKAELSKSKEISCRDIEDFLLPTRE-PEILWYKECRTKTW 1080
Query: 169 LDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI 228
+I F +D L++ V E GNYTC Y + + R E P +
Sbjct: 1081 RPSIVFK--RDTLLIREVREDDIGNYTCELKY----GGFVVRRTTELTVTAPLTDKPPKL 1242
Query: 229 VSPANETM---EVDLGSQIQLICNV----TGQLSDIAYW-KWNGSVIDEDDPVLGEDYYS 280
+ P + E LG L C +G +S + YW K + D D+ + E
Sbjct: 1243 LYPMESKLTIQETQLGDSANLTCRAFFGYSGDVSPLIYWMKGEKFIEDLDENRVWESDIR 1422
Query: 281 V--ENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHM 338
+ E+ + S + V ++ E + Y +C+ +N +G A + L + +
Sbjct: 1423 ILKEHLGEQEVSISLIVDSVEEGDLGNY----SCYVENGNGRRHASVLLHKRELMYTVEL 1590
Query: 339 IGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGE- 397
G + +++VC V IYK +KI+I+L+YR+ + D K YDAY+ Y K +
Sbjct: 1591 AGGLGAILLLLVCLVTIYKCYKIEIMLFYRN--HFGAEELDGDNKDYDAYLSYTKVDPDQ 1764
Query: 398 --GSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILV 455
T + + F ++LP++LEK GYKLFI RD +E + V +S+RLII++
Sbjct: 1765 WNQETGEEERFALEILPDMLEKHYGYKLFIPDRDLIPTGTYIEDVARCVDQSKRLIIVM- 1941
Query: 456 RETSGFSWLGGSS--EEQIAMYNALVQDGIKVVLL---ELEKIQDYEKMPESIKFIKQKH 510
T + G S E + + N LV IKV+L+ EL I +Y+++ E++K +
Sbjct: 1942 --TPNYVVRRGWSIFELETRLRNMLVTGEIKVILIECSELRGIMNYQEV-EALKHTIKLL 2112
Query: 511 GAIRWSGDFTQGPQSAK--TRFWKNVRYHMPVQRRSPSSKHQLL 552
I+W GP+ K ++FWK ++Y MP +R P + Q L
Sbjct: 2113 TVIKW-----HGPKCNKLNSKFWKRLQYEMPFKRIEPITHEQAL 2229
>emb|AJ243874.1|HSA243874 Homo sapiens mRNA for oligophrenin-4 (OPHN4 gene)
Length = 3504
Score = 194 bits (494), Expect = 1e-47
Identities = 153/524 (29%), Positives = 257/524 (48%), Gaps = 25/524 (4%)
Frame = +1
Query: 54 TITWYKD----DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKI 109
++ WYK D + P++ + SR+ + ++ +WF P ++DSG Y CV+RNS+YC+++ I
Sbjct: 727 SLMWYKSSGPGDFEEPIAFD-GSRMSKEEDSIWFRPTLLQDSGLYACVIRNSTYCMKVSI 903
Query: 110 SAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCK-PLL 168
S EN+ LCYN++ + +K ++ + C +E F E P++ WYK+C+
Sbjct: 904 SLTVGENDTGLCYNSKMKYFEKAELSKSKEISCRDIEDFLLPTRE-PEILWYKECRTKTW 1080
Query: 169 LDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI 228
+I F +D L++ V E GNYTC Y + + R E P +
Sbjct: 1081 RPSIVFK--RDTLLIREVREDDIGNYTCELKY----GGFVVRRTTELTVTAPLTDKPPKL 1242
Query: 229 VSPANETM---EVDLGSQIQLICNV----TGQLSDIAYW-KWNGSVIDEDDPVLGEDYYS 280
+ P + E LG L C +G +S + YW K + D D+ + E
Sbjct: 1243 LYPMESKLTIQETQLGDSANLTCRAFFGYSGDVSPLIYWMKGEKFIEDLDENRVWESDIR 1422
Query: 281 V--ENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHM 338
+ E+ + S + V ++ E + Y +C+ +N +G A + L + +
Sbjct: 1423 ILKEHLGEQEVSISLIVDSVEEGDLGNY----SCYVENGNGRRHASVLLHKRELMYTVEL 1590
Query: 339 IGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGE- 397
G + +++VC V IYK +KI+I+L+YR+ + D K YDAY+ Y K +
Sbjct: 1591 AGGLGAILLLLVCLVTIYKCYKIEIMLFYRN--HFGAEELDGDNKDYDAYLSYTKVDPDQ 1764
Query: 398 --GSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILV 455
T + + F ++LP++LEK GYKLFI RD +E + V +S+RLII++
Sbjct: 1765 WNQETGEEERFALEILPDMLEKHYGYKLFIPDRDLIPTGTYIEDVARCVDQSKRLIIVM- 1941
Query: 456 RETSGFSWLGGSS--EEQIAMYNALVQDGIKVVLL---ELEKIQDYEKMPESIKFIKQKH 510
T + G S E + + N LV IKV+L+ EL I +Y+++ E++K +
Sbjct: 1942 --TPNYVVRRGWSIFELETRLRNMLVTGEIKVILIECSELRGIMNYQEV-EALKHTIKLL 2112
Query: 511 GAIRWSGDFTQGPQSAK--TRFWKNVRYHMPVQRRSPSSKHQLL 552
I+W GP+ K ++FWK ++Y MP +R P + Q L
Sbjct: 2113 TVIKW-----HGPKCNKLNSKFWKRLQYEMPFKRIEPITHEQAL 2229
>ref|NM_003855.1| Homo sapiens interleukin 18 receptor 1 (IL18R1), mRNA
Length = 3522
Score = 190 bits (482), Expect = 4e-46
Identities = 151/560 (26%), Positives = 254/560 (44%), Gaps = 14/560 (2%)
Frame = +1
Query: 13 LLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSK---TPVSTE 69
+LIS A+ C R ++ + C L T +WYK ++
Sbjct: 58 VLISVSTAESCTSRPHITVVEGEPFYLKHCSCSLAHEIETTTKSWYKSSGSQEHVELNPR 237
Query: 70 QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFK 129
+SRI H L F P ++ D+G Y+ ++N + ++ + + + C+ + +
Sbjct: 238 SSSRIALHDCVLEFWPVELNDTGSYFFQMKNYTQKWKLNV----IRRNKHSCFTERQVTS 405
Query: 130 QKLPVAGDGGLVCP--YMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVA 187
+ + V + C Y + N + YK+CK LLL+N K+ I N
Sbjct: 406 KIVEVKKFFQITCENSYYQTLVNSTS------LYKNCKKLLLENN-----KNPTIKKNAE 552
Query: 188 EKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLI 247
+ +G Y+C + GK + IT+ +E+ PV++ P + V+LG ++L
Sbjct: 553 FEDQGYYSCVHFLHHNGKLFNITKTFNITIVEDRSNIVPVLLGPKLNHVAVELGKNVRLN 732
Query: 248 CNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYK 307
C+ D+ YW + G D + E + P K ++ VL I I
Sbjct: 733 CSALLNEEDVIYWMF-GEENGSDPNIHEEKEMRIMTPEGKWHAS--KVLRIENIGESNLN 903
Query: 308 HPFTCFAKNTHGIDAAYIQLI-------YPVTNFQKHMIGICVTLTVIIVCSVFIYKIFK 360
+ C +T G D L+ P F + MI I V + V +VC V + I++
Sbjct: 904 VLYNCTVASTGGTDTKSFILVRKADMADIPGHVFTRGMI-IAVLILVAVVCLVTVCVIYR 1080
Query: 361 IDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCG 420
+D+VL+YR + +DGKTYDA++ Y K + + F ++LP VLEK G
Sbjct: 1081VDLVLFYRHLTRRDETL--TDGKTYDAFVSYLKECRPENGEE-HTFAVEILPRVLEKHFG 1251
Query: 421 YKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGS--SEEQIAMYNAL 478
YKL I+ RD G +V+ I+ ++KSRRLII+L + S++ E + ++ AL
Sbjct: 1252YKLCIFERDVVPGGAVVDEIHSLIEKSRRLIIVLSK-----SYMSNEVRYELESGLHEAL 1416
Query: 479 VQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHM 538
V+ IK++L+E + D+ +P+S+K +K H ++W D + S +RFWKN+ Y M
Sbjct: 1417VERKIKIILIEFTPVTDFTFLPQSLKLLK-SHRVLKWKADKS---LSYNSRFWKNLLYLM 1584
Query: 539 PVQRRSPSSKHQLLSPATKE 558
P + P + P E
Sbjct: 1585PAKTVKPGRDEPEVLPVLSE 1644
>gb|U43672.1|HSU43672 Human putative transmembrane receptor IL-1Rrp mRNA, complete cds
Length = 3522
Score = 190 bits (482), Expect = 4e-46
Identities = 151/560 (26%), Positives = 254/560 (44%), Gaps = 14/560 (2%)
Frame = +1
Query: 13 LLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSK---TPVSTE 69
+LIS A+ C R ++ + C L T +WYK ++
Sbjct: 58 VLISVSTAESCTSRPHITVVEGEPFYLKHCSCSLAHEIETTTKSWYKSSGSQEHVELNPR 237
Query: 70 QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFK 129
+SRI H L F P ++ D+G Y+ ++N + ++ + + + C+ + +
Sbjct: 238 SSSRIALHDCVLEFWPVELNDTGSYFFQMKNYTQKWKLNV----IRRNKHSCFTERQVTS 405
Query: 130 QKLPVAGDGGLVCP--YMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVA 187
+ + V + C Y + N + YK+CK LLL+N K+ I N
Sbjct: 406 KIVEVKKFFQITCENSYYQTLVNSTS------LYKNCKKLLLENN-----KNPTIKKNAE 552
Query: 188 EKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLI 247
+ +G Y+C + GK + IT+ +E+ PV++ P + V+LG ++L
Sbjct: 553 FEDQGYYSCVHFLHHNGKLFNITKTFNITIVEDRSNIVPVLLGPKLNHVAVELGKNVRLN 732
Query: 248 CNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYK 307
C+ D+ YW + G D + E + P K ++ VL I I
Sbjct: 733 CSALLNEEDVIYWMF-GEENGSDPNIHEEKEMRIMTPEGKWHAS--KVLRIENIGESNLN 903
Query: 308 HPFTCFAKNTHGIDAAYIQLI-------YPVTNFQKHMIGICVTLTVIIVCSVFIYKIFK 360
+ C +T G D L+ P F + MI I V + V +VC V + I++
Sbjct: 904 VLYNCTVASTGGTDTKSFILVRKADMADIPGHVFTRGMI-IAVLILVAVVCLVTVCVIYR 1080
Query: 361 IDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCG 420
+D+VL+YR + +DGKTYDA++ Y K + + F ++LP VLEK G
Sbjct: 1081VDLVLFYRHLTRRDETL--TDGKTYDAFVSYLKECRPENGEE-HTFAVEILPRVLEKHFG 1251
Query: 421 YKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGS--SEEQIAMYNAL 478
YKL I+ RD G +V+ I+ ++KSRRLII+L + S++ E + ++ AL
Sbjct: 1252YKLCIFERDVVPGGAVVDEIHSLIEKSRRLIIVLSK-----SYMSNEVRYELESGLHEAL 1416
Query: 479 VQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHM 538
V+ IK++L+E + D+ +P+S+K +K H ++W D + S +RFWKN+ Y M
Sbjct: 1417VERKIKIILIEFTPVTDFTFLPQSLKLLK-SHRVLKWKADKS---LSYNSRFWKNLLYLM 1584
Query: 539 PVQRRSPSSKHQLLSPATKE 558
P + P + P E
Sbjct: 1585PAKTVKPGRDEPEVLPVLSE 1644
>ref|NM_008365.1| Mus musculus interleukin 18 receptor 1 (Il18r1), mRNA
Length = 2830
Score = 188 bits (478), Expect = 1e-45
Identities = 147/552 (26%), Positives = 249/552 (44%), Gaps = 13/552 (2%)
Frame = +3
Query: 7 LICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKG---TITWYKDDSK 63
LI + +LI + C R + I V ++PC ++ H+ T+ W+K +
Sbjct: 396 LILTLCILIVKSASKSCIHRSQ--IHVVEGEPFYLKPCGISAPVHRNETATMRWFKGSAS 569
Query: 64 ---TPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNL 120
++ + R+ H L F P ++ED G Y V N R + + +
Sbjct: 570 HEYRELNNRSSPRVTFHDHTLEFWPVEMEDEGTYISQVGND----RRNWTLNVTKRNKHS 737
Query: 121 CYNAQAIFKQKLPVAGDGGLVCPYMEFFKNEN-NELPKLQW-YKDCKPLLLDNIHFSGVK 178
C++ + + + + V + C KN N EL + W YK+CK + K
Sbjct: 738 CFSDKLVTSRDVEVNKSLHITC------KNPNYEELIQDTWLYKNCKEIS---------K 872
Query: 179 DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEV 238
I+ + G Y+C S + G +Y IT+ + +E P I+ P E + V
Sbjct: 873 TPRILKDAEFGDEGYYSCVFSVHHNGTRYNITKTVNITVIEGRSKVTPAILGPKCEKVGV 1052
Query: 239 DLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNI 298
+LG ++L C+ + D+ YW D DP + ED ++ + +L
Sbjct: 1053ELGKDVELNCSASLNKDDLFYWSIRKE--DSSDPNVQEDRKETTTWISEGKLHASKILRF 1226
Query: 299 SEIESRFYKHPFTCFAKNTHGIDA-AYIQLIYPVTNFQKHM----IGICVTLTVIIVCSV 353
+I + + C N ID +++ + + + H+ + + V +V VC V
Sbjct: 1227QKITENYLNVLYNCTVANEEAIDTKSFVLVRKEIPDIPGHVFTGGVTVLVLASVAAVCIV 1406
Query: 354 FIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPE 413
+ I+K+D+VL+YR + +DGKTYDA++ Y K + + F + LP
Sbjct: 1407ILCVIYKVDLVLFYRRIAERDETL--TDGKTYDAFVSYLKECHPENKEEYT-FAVETLPR 1577
Query: 414 VLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIA 473
VLEKQ GYKL I+ RD G +VE I+ ++KSRRLII+L + + G E +
Sbjct: 1578VLEKQFGYKLCIFERDVVPGGAVVEEIHSLIEKSRRLIIVL---SQSYLTNGARRELESG 1748
Query: 474 MYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKN 533
++ ALV+ IK++L+E + +P S+K +K + ++W D S +RFWKN
Sbjct: 1749LHEALVERKIKIILIEFTPASNITFLPPSLKLLK-SYRVLKWRAD----SPSMNSRFWKN 1913
Query: 534 VRYHMPVQRRSP 545
+ Y MP + P
Sbjct: 1914LVYLMPAKAVKP 1949
>gb|U43673.1|MMU43673 Mus musculus putative transmembrane receptor IL-1Rrp mRNA, complete
cds
Length = 2830
Score = 188 bits (478), Expect = 1e-45
Identities = 147/552 (26%), Positives = 249/552 (44%), Gaps = 13/552 (2%)
Frame = +3
Query: 7 LICFIALLISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKG---TITWYKDDSK 63
LI + +LI + C R + I V ++PC ++ H+ T+ W+K +
Sbjct: 396 LILTLCILIVKSASKSCIHRSQ--IHVVEGEPFYLKPCGISAPVHRNETATMRWFKGSAS 569
Query: 64 ---TPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNL 120
++ + R+ H L F P ++ED G Y V N R + + +
Sbjct: 570 HEYRELNNRSSPRVTFHDHTLEFWPVEMEDEGTYISQVGND----RRNWTLNVTKRNKHS 737
Query: 121 CYNAQAIFKQKLPVAGDGGLVCPYMEFFKNEN-NELPKLQW-YKDCKPLLLDNIHFSGVK 178
C++ + + + + V + C KN N EL + W YK+CK + K
Sbjct: 738 CFSDKLVTSRDVEVNKSLHITC------KNPNYEELIQDTWLYKNCKEIS---------K 872
Query: 179 DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEV 238
I+ + G Y+C S + G +Y IT+ + +E P I+ P E + V
Sbjct: 873 TPRILKDAEFGDEGYYSCVFSVHHNGTRYNITKTVNITVIEGRSKVTPAILGPKCEKVGV 1052
Query: 239 DLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNI 298
+LG ++L C+ + D+ YW D DP + ED ++ + +L
Sbjct: 1053ELGKDVELNCSASLNKDDLFYWSIRKE--DSSDPNVQEDRKETTTWISEGKLHASKILRF 1226
Query: 299 SEIESRFYKHPFTCFAKNTHGIDA-AYIQLIYPVTNFQKHM----IGICVTLTVIIVCSV 353
+I + + C N ID +++ + + + H+ + + V +V VC V
Sbjct: 1227QKITENYLNVLYNCTVANEEAIDTKSFVLVRKEIPDIPGHVFTGGVTVLVLASVAAVCIV 1406
Query: 354 FIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPE 413
+ I+K+D+VL+YR + +DGKTYDA++ Y K + + F + LP
Sbjct: 1407ILCVIYKVDLVLFYRRIAERDETL--TDGKTYDAFVSYLKECHPENKEEYT-FAVETLPR 1577
Query: 414 VLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIA 473
VLEKQ GYKL I+ RD G +VE I+ ++KSRRLII+L + + G E +
Sbjct: 1578VLEKQFGYKLCIFERDVVPGGAVVEEIHSLIEKSRRLIIVL---SQSYLTNGARRELESG 1748
Query: 474 MYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKN 533
++ ALV+ IK++L+E + +P S+K +K + ++W D S +RFWKN
Sbjct: 1749LHEALVERKIKIILIEFTPASNITFLPPSLKLLK-SYRVLKWRAD----SPSMNSRFWKN 1913
Query: 534 VRYHMPVQRRSP 545
+ Y MP + P
Sbjct: 1914LVYLMPAKAVKP 1949
>gb|U48592.1|RNU48592 Rattus norvegicus interleukin-1 receptor accessory protein (IL-1)
mRNA, complete cds
Length = 1862
Score = 155 bits (391), Expect = 1e-35
Identities = 137/537 (25%), Positives = 256/537 (47%), Gaps = 27/537 (5%)
Frame = +1
Query: 54 TITWY----KDDSKTPVSTE-QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 108
T+ WY D + P++ +RI + K+ LWF P + D+G+Y C++RN++YC ++
Sbjct: 301 TLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVA 480
Query: 109 ISAKFVENEPNLCYNAQAIFKQKLPV------AGDGGLVCPYMEFFKNENNELPKLQWYK 162
+ V+ + C+N+ +LPV G + CP ++ + ++ P + WYK
Sbjct: 481 FPLEVVQKDS--CFNS----PMRLPVHRLYIEQGIHNITCPNVDGY-FPSSVKPSVTWYK 639
Query: 163 DCKPLL-LDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN 221
C ++ N+ G+ + V+ + GNYTC +Y G+ + +TR + +
Sbjct: 640 GCTEIVNFHNVQPKGMNLSFFIPLVS--NNGNYTCVVTYLENGRLFHLTRTMTVKVVGSP 813
Query: 222 KPTRPVIVSPANETM--EVDLGSQIQLICNVTGQL----SDIAYWKWNGSVIDEDDPVLG 275
K P + N+ + E + G ++ + C V + +W +G D D PV
Sbjct: 814 KDAVPPHIYSPNDRVVYEKEPGEELVIPCKVYFSFIMDSHNEIWWTIDGKKPD-DVPV-- 984
Query: 276 EDYYSVENP--ANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG--IDAAYI-QLIYP 330
D +E+ ++ T +L+I ++ K + C A+N G AA + Q + P
Sbjct: 985 -DITIIESVSYSSTEDETRTQILSIKKVTPEDLKRNYVCHARNAEGEAEQAAKVKQKVIP 1161
Query: 331 VTNFQKHMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYIL 390
+ G T+ +++V + +Y ++ +++VL+YR + DGK YD Y+
Sbjct: 1162PRYTVELACGFGATVFLVVVL-IVVYHVYWLEMVLFYR--AHFGTDETILDGKEYDIYVS 1332
Query: 391 YPKTVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRL 450
Y + E + FV L VLE + GYKL I+ RD + G + + ++KSRRL
Sbjct: 1333YARNAEE------EEFVLLTLRGVLENEFGYKLCIFDRDSFPGGIVTDETLSFIQKSRRL 1494
Query: 451 IIILVRETSGFSWLGGSS--EEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQ 508
+++L + + G + E + + N + I V+L++ + ++D + + +K K
Sbjct: 1495LVVL---SPNYVLQGTQALLELKAGLENMASRGNINVILVQYKAVKDLK--VKELKRAKS 1659
Query: 509 KHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQR--RSPSSKHQLLSPATKEKLQRE 563
I+W G+ ++ PQ RFWK ++ MPV++ R SS Q LS ++ + + +E
Sbjct: 1660VLTVIKWKGEKSKYPQG---RFWKQLQVAMPVKKSPRWSSSDKQGLSYSSLKNV*KE 1821
>ref|NM_012968.1| Rattus norvegicus Interleukin 1 receptor accessory protein
(Il1rap), mRNA
Length = 1862
Score = 155 bits (391), Expect = 1e-35
Identities = 137/537 (25%), Positives = 256/537 (47%), Gaps = 27/537 (5%)
Frame = +1
Query: 54 TITWY----KDDSKTPVSTE-QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 108
T+ WY D + P++ +RI + K+ LWF P + D+G+Y C++RN++YC ++
Sbjct: 301 TLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVA 480
Query: 109 ISAKFVENEPNLCYNAQAIFKQKLPV------AGDGGLVCPYMEFFKNENNELPKLQWYK 162
+ V+ + C+N+ +LPV G + CP ++ + ++ P + WYK
Sbjct: 481 FPLEVVQKDS--CFNS----PMRLPVHRLYIEQGIHNITCPNVDGY-FPSSVKPSVTWYK 639
Query: 163 DCKPLL-LDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN 221
C ++ N+ G+ + V+ + GNYTC +Y G+ + +TR + +
Sbjct: 640 GCTEIVNFHNVQPKGMNLSFFIPLVS--NNGNYTCVVTYLENGRLFHLTRTMTVKVVGSP 813
Query: 222 KPTRPVIVSPANETM--EVDLGSQIQLICNVTGQL----SDIAYWKWNGSVIDEDDPVLG 275
K P + N+ + E + G ++ + C V + +W +G D D PV
Sbjct: 814 KDAVPPHIYSPNDRVVYEKEPGEELVIPCKVYFSFIMDSHNEIWWTIDGKKPD-DVPV-- 984
Query: 276 EDYYSVENP--ANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG--IDAAYI-QLIYP 330
D +E+ ++ T +L+I ++ K + C A+N G AA + Q + P
Sbjct: 985 -DITIIESVSYSSTEDETRTQILSIKKVTPEDLKRNYVCHARNAEGEAEQAAKVKQKVIP 1161
Query: 331 VTNFQKHMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYIL 390
+ G T+ +++V + +Y ++ +++VL+YR + DGK YD Y+
Sbjct: 1162PRYTVELACGFGATVFLVVVL-IVVYHVYWLEMVLFYR--AHFGTDETILDGKEYDIYVS 1332
Query: 391 YPKTVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRL 450
Y + E + FV L VLE + GYKL I+ RD + G + + ++KSRRL
Sbjct: 1333YARNAEE------EEFVLLTLRGVLENEFGYKLCIFDRDSFPGGIVTDETLSFIQKSRRL 1494
Query: 451 IIILVRETSGFSWLGGSS--EEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQ 508
+++L + + G + E + + N + I V+L++ + ++D + + +K K
Sbjct: 1495LVVL---SPNYVLQGTQALLELKAGLENMASRGNINVILVQYKAVKDLK--VKELKRAKS 1659
Query: 509 KHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQR--RSPSSKHQLLSPATKEKLQRE 563
I+W G+ ++ PQ RFWK ++ MPV++ R SS Q LS ++ + + +E
Sbjct: 1660VLTVIKWKGEKSKYPQG---RFWKQLQVAMPVKKSPRWSSSDKQGLSYSSLKNV*KE 1821
>ref|NM_002182.1| Homo sapiens interleukin 1 receptor accessory protein (IL1RAP),
mRNA
Length = 4724
Score = 154 bits (388), Expect = 3e-35
Identities = 130/534 (24%), Positives = 247/534 (45%), Gaps = 24/534 (4%)
Frame = +3
Query: 54 TITWY----KDDSKTPVSTE-QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 108
T+ WY D + P++ +RI + K+ LWF P + D+G+Y C++RN++YC ++
Sbjct: 405 TLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVA 584
Query: 109 ISAKFVENEPNLCYNAQAIFKQKLPV------AGDGGLVCPYMEFFKNENNELPKLQWYK 162
+ V+ + C+N+ KLPV G + CP ++ + ++ P + WY
Sbjct: 585 FPLEVVQKDS--CFNS----PMKLPVHKLYIEYGIQRITCPNVDGY-FPSSVKPTITWYM 743
Query: 163 DC-KPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN 221
C K +N+ G+ ++ ++ + GNYTC +Y G+ + +TR + +
Sbjct: 744 GCYKIQNFNNVIPEGMNLSFLIALIS--NNGNYTCVVTYPENGRTFHLTRTLTVKVVGSP 917
Query: 222 KPTRPVIVSPANE--TMEVDLGSQIQLICNVTGQL----SDIAYWKWNGSVIDEDDPVLG 275
K P ++ N+ E + G ++ + C V + +W +G DD +
Sbjct: 918 KNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGK--KPDDITID 1091
Query: 276 EDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG--IDAAYIQLIYPVTN 333
+ + T +L+I ++ S K + C A++ G AA ++ P
Sbjct: 1092VTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKVPAPR 1271
Query: 334 FQKHMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPK 393
+ + +++V + +Y ++ +++VL+YR + DGK YD Y+ Y +
Sbjct: 1272YTVELACGFGATVLLVVILIVVYHVYWLEMVLFYR--AHFGTDETILDGKEYDIYVSYAR 1445
Query: 394 TVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIII 453
E + FV L VLE + GYKL I+ RD G + + ++KSRRL+++
Sbjct: 1446NAEE------EEFVLLTLRGVLENEFGYKLCIFDRDSLPGGIVTDETLSFIQKSRRLLVV 1607
Query: 454 LVRETSGFSWLGGSS--EEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHG 511
L + + G + E + + N + I V+L++ + ++ E + +K K
Sbjct: 1608L---SPNYVLQGTQALLELKAGLENMASRGNINVILVQYKAVK--ETKVKELKRAKTVLT 1772
Query: 512 AIRWSGDFTQGPQSAKTRFWKNVRYHMPVQR--RSPSSKHQLLSPATKEKLQRE 563
I+W G+ ++ PQ RFWK ++ MPV++ R SS Q LS ++ + + +E
Sbjct: 1773VIKWKGEKSKYPQG---RFWKQLQVAMPVKKSPRRSSSDEQGLSYSSLKNV*KE 1925
>dbj|AB006537.1|AB006537 Homo sapiens mRNA for interleukin 1 receptor accessory protein,
complete cds
Length = 4724
Score = 154 bits (388), Expect = 3e-35
Identities = 130/534 (24%), Positives = 247/534 (45%), Gaps = 24/534 (4%)
Frame = +3
Query: 54 TITWY----KDDSKTPVSTE-QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 108
T+ WY D + P++ +RI + K+ LWF P + D+G+Y C++RN++YC ++
Sbjct: 405 TLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVA 584
Query: 109 ISAKFVENEPNLCYNAQAIFKQKLPV------AGDGGLVCPYMEFFKNENNELPKLQWYK 162
+ V+ + C+N+ KLPV G + CP ++ + ++ P + WY
Sbjct: 585 FPLEVVQKDS--CFNS----PMKLPVHKLYIEYGIQRITCPNVDGY-FPSSVKPTITWYM 743
Query: 163 DC-KPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN 221
C K +N+ G+ ++ ++ + GNYTC +Y G+ + +TR + +
Sbjct: 744 GCYKIQNFNNVIPEGMNLSFLIALIS--NNGNYTCVVTYPENGRTFHLTRTLTVKVVGSP 917
Query: 222 KPTRPVIVSPANE--TMEVDLGSQIQLICNVTGQL----SDIAYWKWNGSVIDEDDPVLG 275
K P ++ N+ E + G ++ + C V + +W +G DD +
Sbjct: 918 KNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGK--KPDDITID 1091
Query: 276 EDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG--IDAAYIQLIYPVTN 333
+ + T +L+I ++ S K + C A++ G AA ++ P
Sbjct: 1092VTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKVPAPR 1271
Query: 334 FQKHMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPK 393
+ + +++V + +Y ++ +++VL+YR + DGK YD Y+ Y +
Sbjct: 1272YTVELACGFGATVLLVVILIVVYHVYWLEMVLFYR--AHFGTDETILDGKEYDIYVSYAR 1445
Query: 394 TVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIII 453
E + FV L VLE + GYKL I+ RD G + + ++KSRRL+++
Sbjct: 1446NAEE------EEFVLLTLRGVLENEFGYKLCIFDRDSLPGGIVTDETLSFIQKSRRLLVV 1607
Query: 454 LVRETSGFSWLGGSS--EEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHG 511
L + + G + E + + N + I V+L++ + ++ E + +K K
Sbjct: 1608L---SPNYVLQGTQALLELKAGLENMASRGNINVILVQYKAVK--ETKVKELKRAKTVLT 1772
Query: 512 AIRWSGDFTQGPQSAKTRFWKNVRYHMPVQR--RSPSSKHQLLSPATKEKLQRE 563
I+W G+ ++ PQ RFWK ++ MPV++ R SS Q LS ++ + + +E
Sbjct: 1773VIKWKGEKSKYPQG---RFWKQLQVAMPVKKSPRRSSSDEQGLSYSSLKNV*KE 1925
>gb|AF029213.1|AF029213 Homo sapiens IL-1 receptor accessory protein mRNA, complete cds
Length = 1740
Score = 154 bits (388), Expect = 3e-35
Identities = 130/534 (24%), Positives = 247/534 (45%), Gaps = 24/534 (4%)
Frame = +1
Query: 54 TITWY----KDDSKTPVSTE-QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 108
T+ WY D + P++ +RI + K+ LWF P + D+G+Y C++RN++YC ++
Sbjct: 208 TLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVA 387
Query: 109 ISAKFVENEPNLCYNAQAIFKQKLPV------AGDGGLVCPYMEFFKNENNELPKLQWYK 162
+ V+ + C+N+ KLPV G + CP ++ + ++ P + WY
Sbjct: 388 FPLEVVQKDS--CFNS----PMKLPVHKLYIEYGIQRITCPNVDGY-FPSSVKPTITWYM 546
Query: 163 DC-KPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN 221
C K +N+ G+ ++ ++ + GNYTC +Y G+ + +TR + +
Sbjct: 547 GCYKIQNFNNVIPEGMNLSFLIALIS--NNGNYTCVVTYPENGRTFHLTRTLTVKVVGSP 720
Query: 222 KPTRPVIVSPANE--TMEVDLGSQIQLICNVTGQL----SDIAYWKWNGSVIDEDDPVLG 275
K P ++ N+ E + G ++ + C V + +W +G DD +
Sbjct: 721 KNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGK--KPDDITID 894
Query: 276 EDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG--IDAAYIQLIYPVTN 333
+ + T +L+I ++ S K + C A++ G AA ++ P
Sbjct: 895 VTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKVPAPR 1074
Query: 334 FQKHMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPK 393
+ + +++V + +Y ++ +++VL+YR + DGK YD Y+ Y +
Sbjct: 1075YTVELACGFGATVLLVVILIVVYHVYWLEMVLFYR--AHFGTDETILDGKEYDIYVSYAR 1248
Query: 394 TVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIII 453
E + FV L VLE + GYKL I+ RD G + + ++KSRRL+++
Sbjct: 1249NAEE------EEFVLLTLRGVLENEFGYKLCIFDRDSLPGGIVTDETLSFIQKSRRLLVV 1410
Query: 454 LVRETSGFSWLGGSS--EEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHG 511
L + + G + E + + N + I V+L++ + ++ E + +K K
Sbjct: 1411L---SPNYVLQGTQALLELKAGLENMASRGNINVILVQYKAVK--ETKVKELKRAKTVLT 1575
Query: 512 AIRWSGDFTQGPQSAKTRFWKNVRYHMPVQR--RSPSSKHQLLSPATKEKLQRE 563
I+W G+ ++ PQ RFWK ++ MPV++ R SS Q LS ++ + + +E
Sbjct: 1576VIKWKGEKSKYPQG---RFWKQLQVAMPVKKSPRRSSSDEQGLSYSSLKNV*KE 1728
>ref|NM_008364.1| Mus musculus interleukin 1 receptor accessory protein (Il1rap),
mRNA
Length = 3355
Score = 152 bits (385), Expect = 6e-35
Identities = 136/535 (25%), Positives = 256/535 (47%), Gaps = 25/535 (4%)
Frame = +3
Query: 54 TITWY----KDDSKTPVSTE-QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 108
T+ WY D + P++ +RI + K+ LWF P + D+G+Y C++RN++YC ++
Sbjct: 333 TLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVA 512
Query: 109 ISAKFVENEPNLCYNAQAIFK-QKLPVA-GDGGLVCPYMEFFKNENNELPKLQWYKDCKP 166
+ V+ + C+N+ F K+ + G + CP ++ + ++ P + WYK C
Sbjct: 513 FPLEVVQKDS--CFNSAMRFPVHKMYIEHGIHKITCPNVDGY-FPSSVKPSVTWYKGCTE 683
Query: 167 LL-LDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTR 225
++ N+ G+ + V+ + GNYTC +Y G+ + +TR + + K
Sbjct: 684 IVDFHNVLPEGMNLSFFIPLVS--NNGNYTCVVTYPENGRLFHLTRTVTVKVVGSPKDAL 857
Query: 226 PVIVSPANETM--EVDLGSQIQLICNVTGQL----SDIAYWKWNGSVIDE--DDPVLGE- 276
P + N+ + E + G ++ + C V + +W +G D+ D + E
Sbjct: 858 PPQIYSPNDRVVYEKEPGEELVIPCKVYFSFIMDSHNEVWWTIDGKKPDDVTVDITINES 1037
Query: 277 -DYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG--IDAAYI-QLIYPVT 332
Y S E+ T +L+I ++ + + C A+NT G AA + Q + P
Sbjct: 1038VSYSSTED------ETRTQILSIKKVTPEDLRRNYVCHARNTKGEAEQAAKVKQKVIPPR 1199
Query: 333 NFQKHMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYP 392
+ G T+ +++V + +Y ++ +++VL+YR + DGK YD Y+ Y
Sbjct: 1200YTVELACGFGATVFLVVVL-IVVYHVYWLEMVLFYR--AHFGTDETILDGKEYDIYVSYA 1370
Query: 393 KTVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLII 452
+ V E + FV L VLE + GYKL I+ RD G + + ++KSRRL++
Sbjct: 1371RNVEE------EEFVLLTLRGVLENEFGYKLCIFDRDSLPGGIVTDETLSFIQKSRRLLV 1532
Query: 453 ILVRETSGFSWLGGSS--EEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKH 510
+L + + G + E + + N + I V+L++ + ++D + + +K K
Sbjct: 1533VL---SPNYVLQGTQALLELKAGLENMASRGNINVILVQYKAVKDMK--VKELKRAKTVL 1697
Query: 511 GAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQR--RSPSSKHQLLSPATKEKLQRE 563
I+W G+ ++ PQ RFWK ++ MPV++ R S+ Q LS ++ + + +E
Sbjct: 1698TVIKWKGEKSKYPQG---RFWKQLQVAMPVKKSPRWSSNDKQGLSYSSLKNV*KE 1853
>emb|X85999.1|MMIL1RACP M.musculus mRNA for interleukin 1 receptor accessory protein
Length = 3355
Score = 152 bits (385), Expect = 6e-35
Identities = 136/535 (25%), Positives = 256/535 (47%), Gaps = 25/535 (4%)
Frame = +3
Query: 54 TITWY----KDDSKTPVSTE-QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 108
T+ WY D + P++ +RI + K+ LWF P + D+G+Y C++RN++YC ++
Sbjct: 333 TLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVA 512
Query: 109 ISAKFVENEPNLCYNAQAIFK-QKLPVA-GDGGLVCPYMEFFKNENNELPKLQWYKDCKP 166
+ V+ + C+N+ F K+ + G + CP ++ + ++ P + WYK C
Sbjct: 513 FPLEVVQKDS--CFNSAMRFPVHKMYIEHGIHKITCPNVDGY-FPSSVKPSVTWYKGCTE 683
Query: 167 LL-LDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTR 225
++ N+ G+ + V+ + GNYTC +Y G+ + +TR + + K
Sbjct: 684 IVDFHNVLPEGMNLSFFIPLVS--NNGNYTCVVTYPENGRLFHLTRTVTVKVVGSPKDAL 857
Query: 226 PVIVSPANETM--EVDLGSQIQLICNVTGQL----SDIAYWKWNGSVIDE--DDPVLGE- 276
P + N+ + E + G ++ + C V + +W +G D+ D + E
Sbjct: 858 PPQIYSPNDRVVYEKEPGEELVIPCKVYFSFIMDSHNEVWWTIDGKKPDDVTVDITINES 1037
Query: 277 -DYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG--IDAAYI-QLIYPVT 332
Y S E+ T +L+I ++ + + C A+NT G AA + Q + P
Sbjct: 1038VSYSSTED------ETRTQILSIKKVTPEDLRRNYVCHARNTKGEAEQAAKVKQKVIPPR 1199
Query: 333 NFQKHMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYP 392
+ G T+ +++V + +Y ++ +++VL+YR + DGK YD Y+ Y
Sbjct: 1200YTVELACGFGATVFLVVVL-IVVYHVYWLEMVLFYR--AHFGTDETILDGKEYDIYVSYA 1370
Query: 393 KTVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLII 452
+ V E + FV L VLE + GYKL I+ RD G + + ++KSRRL++
Sbjct: 1371RNVEE------EEFVLLTLRGVLENEFGYKLCIFDRDSLPGGIVTDETLSFIQKSRRLLV 1532
Query: 453 ILVRETSGFSWLGGSS--EEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKH 510
+L + + G + E + + N + I V+L++ + ++D + + +K K
Sbjct: 1533VL---SPNYVLQGTQALLELKAGLENMASRGNINVILVQYKAVKDMK--VKELKRAKTVL 1697
Query: 511 GAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQR--RSPSSKHQLLSPATKEKLQRE 563
I+W G+ ++ PQ RFWK ++ MPV++ R S+ Q LS ++ + + +E
Sbjct: 1698TVIKWKGEKSKYPQG---RFWKQLQVAMPVKKSPRWSSNDKQGLSYSSLKNV*KE 1853
>gb|AC007248.3|AC007248 Homo sapiens BAC clone RP11-315O22 from 2, complete sequence
Length = 201535
Score = 151 bits (382), Expect = 1e-34
Identities = 74/117 (63%), Positives = 91/117 (77%)
Frame = -3
Query: 436 IVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQD 495
+ VI+ENVK RRLI+I+V E+ GF L SEEQIA+Y+AL+QDG+KV+L+ELEKI+D
Sbjct: 193877 VANVIDENVKLCRRLIVIVVPESLGFGLLKNLSEEQIAVYSALIQDGMKVILIELEKIED 193698
Query: 496 YEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQLL 552
Y MPESI++IKQKHGAIRW GDFT+ Q KT+FWK VRYHMP +R P QLL
Sbjct: 193697 YTVMPESIQYIKQKHGAIRWHGDFTEQSQCMKTKFWKTVRYHMPPRRCRPFPPVQLL 193527
Score = 76.6 bits (187), Expect = 6e-12
Identities = 42/133 (31%), Positives = 75/133 (55%), Gaps = 8/133 (6%)
Frame = -2
Query: 435 DIVEVINENVKKSRRLIIIL---VRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELE 491
D+V + N++KSRR I IL + F++ E+++A++ AL+Q+ KV+L+E+E
Sbjct: 77241 DVVTAVETNIRKSRRHIFILTPQITHNKEFAY-----EQEVALHCALIQNDAKVILIEME 77077
Query: 492 KIQDY-----EKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPS 546
+ + E + +S++ + + G I+W D +S ++FWK+VRY MPV + P
Sbjct: 77076 ALSELDMLQAEALQDSLQHLMKVQGTIKWREDHIANKRSLNSKFWKHVRYQMPVPSKIP- 76900
Query: 547 SKHQLLSPATKEK 559
K L+P +K
Sbjct: 76899 RKASSLTPLAAQK 76861
Score = 75.5 bits (184), Expect = 1e-11
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = -1
Query: 380 SDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGE 434
SDGK YDAY+LYPK E D V +LPEVLE+QCGYKLFI+GRD++ G+
Sbjct: 195817 SDGKLYDAYVLYPKPHKESQRHAVDALVLNILPEVLERQCGYKLFIFGRDEFPGQ 195653
Score = 66.2 bits (160), Expect = 8e-09
Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Frame = -3
Query: 436 IVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQI--AMYNALVQDGIKVVLLELEKI 493
+V+ I+ ++KSRRLII+L + S++ ++ ++ ALV+ IK++L+E +
Sbjct: 32243 VVDEIHSLIEKSRRLIIVLSK-----SYMSNEVRYELESGLHEALVERKIKIILIEFTPV 32079
Query: 494 QDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQLLS 553
D+ +P+S+K +K H ++W D + S +RFWKN+ Y MP + P +
Sbjct: 32078 TDFTFLPQSLKLLK-SHRVLKWKADKS---LSYNSRFWKNLLYLMPAKTVKPGRDEPEVL 31911
Query: 554 PATKE 558
P E
Sbjct: 31910 PVLSE 31896
Score = 60.5 bits (145), Expect = 4e-07
Identities = 29/57 (50%), Positives = 38/57 (65%), Gaps = 2/57 (3%)
Frame = -2
Query: 380 SDGKTYDAYILYPKTVGEGS--TSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGE 434
SDGK YDAY++YP+ + S + FV ++LP+VLE +CGY L IYGRD GE
Sbjct: 79701 SDGKLYDAYVVYPRNYKSSTDGASRVEHFVHQILPDVLENKCGYTLCIYGRDMLPGE 79531
Score = 44.7 bits (104), Expect = 0.025
Identities = 23/49 (46%), Positives = 30/49 (60%)
Frame = -2
Query: 381 DGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRD 429
DGKTYDA++ Y K + + F ++LP VLEK GYKL I+ RD
Sbjct: 34308 DGKTYDAFVSYLKECRPENGEE-HTFAVEILPRVLEKHFGYKLCIFERD 34165
Score = 42.7 bits (99), Expect = 0.094
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = -2
Query: 37 NEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYC 96
NE + CP + T+ WY + + T++ +R+ + L F+PA V DSG Y C
Sbjct: 89916 NEALIVRCP-RQGKPSYTVDWYYSQTNKSIPTQERNRVFASGQLLKFLPAAVADSGIYTC 89740
Query: 97 VVR 99
+VR
Sbjct: 89739 IVR 89731
>ref|NM_003853.1| Homo sapiens interleukin 18 receptor accessory protein (IL18RAP),
mRNA
Length = 2681
Score = 136 bits (342), Expect = 6e-30
Identities = 130/515 (25%), Positives = 226/515 (43%), Gaps = 18/515 (3%)
Frame = +1
Query: 55 ITWYKDDSK-TPVSTEQASRIH--QHKEKLWFVPAKVEDSGHYYCVVR--NSSY----CL 105
+ WY+ S P+ + S H Q K L F+ V +SG Y C + S Y C+
Sbjct: 727 VQWYQQPSNGDPLEDIRKSYPHIIQDKCTLHFLTPGVNNSGSYICRPKMIKSPYDVACCV 906
Query: 106 RIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCK 165
++ + K + N A KQ L + G + CP + + + P + WYK+ K
Sbjct: 907 KMILEVK---PQTNASCEYSASHKQDLLLGSTGSISCPSLSC--QSDAQSPAVTWYKNGK 1071
Query: 166 PLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTR 225
L ++ +R++V V + H+G Y C + + + + V++ T+ + +
Sbjct: 1072 LLSVER------SNRIVVDEVYDYHQGTYVCDYTQSDTVSSWTVRAVVQVRTIVGDTKLK 1233
Query: 226 PVIVSPANETMEVDLGSQIQLICNVTGQLSDI--AYWKWNGSVIDEDDPVLGEDYYSVEN 283
P I+ P +T+EV+LG + + C + KW D + V + S++
Sbjct: 1234 PDILDPVEDTLEVELGKPLTISCKARFGFERVFNPVIKWYIKDSDLEWEVSVPEAKSIK- 1410
Query: 284 PANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKH-MIGIC 342
+ + + + + ++ R + F CF +N+ G +QL + ++G
Sbjct: 1411 -STLKDEIIERNIILEKVTQRDLRRKFVCFVQNSIGNTTQSVQLKEKRGVVLLYILLGTI 1587
Query: 343 VTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSD 402
TL ++ S +Y+ + I+IVL YR Y D K +DA++ Y K S +
Sbjct: 1588 GTLVAVLAASALLYRHW-IEIVLLYR--TYQSKDQTLGDKKDFDAFVSYAKWSSFPSEAT 1758
Query: 403 CDI----FVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRET 458
+ + P+VLE + GY L + RD G E I +K+SRR I IL
Sbjct: 1759 SSLSEEHLALSLFPDVLENKYGYSLCLLERDVAPGGVYAEDIVSIIKRSRRGIFIL---- 1926
Query: 459 SGFSWLGGSS--EEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWS 516
+++ G S E Q A+ AL +K++L++ Q+ E +P +K + + W
Sbjct: 1927 -SPNYVNGPSIFELQAAVNLALDDQTLKLILIKFCYFQEPESLPHLVKKALRVLPTVTWR 2103
Query: 517 GDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQL 551
G + P S RFW +RYHMPV+ + +QL
Sbjct: 2104 GLKSVPPNS---RFWAKMRYHMPVKNSQGFTWNQL 2199
>gb|AF077346.1|AF077346 Homo sapiens interleukin-18 receptor accessory protein-like mRNA,
complete cds
Length = 2681
Score = 136 bits (342), Expect = 6e-30
Identities = 130/515 (25%), Positives = 226/515 (43%), Gaps = 18/515 (3%)
Frame = +1
Query: 55 ITWYKDDSK-TPVSTEQASRIH--QHKEKLWFVPAKVEDSGHYYCVVR--NSSY----CL 105
+ WY+ S P+ + S H Q K L F+ V +SG Y C + S Y C+
Sbjct: 727 VQWYQQPSNGDPLEDIRKSYPHIIQDKCTLHFLTPGVNNSGSYICRPKMIKSPYDVACCV 906
Query: 106 RIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCK 165
++ + K + N A KQ L + G + CP + + + P + WYK+ K
Sbjct: 907 KMILEVK---PQTNASCEYSASHKQDLLLGSTGSISCPSLSC--QSDAQSPAVTWYKNGK 1071
Query: 166 PLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTR 225
L ++ +R++V V + H+G Y C + + + + V++ T+ + +
Sbjct: 1072 LLSVER------SNRIVVDEVYDYHQGTYVCDYTQSDTVSSWTVRAVVQVRTIVGDTKLK 1233
Query: 226 PVIVSPANETMEVDLGSQIQLICNVTGQLSDI--AYWKWNGSVIDEDDPVLGEDYYSVEN 283
P I+ P +T+EV+LG + + C + KW D + V + S++
Sbjct: 1234 PDILDPVEDTLEVELGKPLTISCKARFGFERVFNPVIKWYIKDSDLEWEVSVPEAKSIK- 1410
Query: 284 PANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKH-MIGIC 342
+ + + + + ++ R + F CF +N+ G +QL + ++G
Sbjct: 1411 -STLKDEIIERNIILEKVTQRDLRRKFVCFVQNSIGNTTQSVQLKEKRGVVLLYILLGTI 1587
Query: 343 VTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEGSTSD 402
TL ++ S +Y+ + I+IVL YR Y D K +DA++ Y K S +
Sbjct: 1588 GTLVAVLAASALLYRHW-IEIVLLYR--TYQSKDQTLGDKKDFDAFVSYAKWSSFPSEAT 1758
Query: 403 CDI----FVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRET 458
+ + P+VLE + GY L + RD G E I +K+SRR I IL
Sbjct: 1759 SSLSEEHLALSLFPDVLENKYGYSLCLLERDVAPGGVYAEDIVSIIKRSRRGIFIL---- 1926
Query: 459 SGFSWLGGSS--EEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRWS 516
+++ G S E Q A+ AL +K++L++ Q+ E +P +K + + W
Sbjct: 1927 -SPNYVNGPSIFELQAAVNLALDDQTLKLILIKFCYFQEPESLPHLVKKALRVLPTVTWR 2103
Query: 517 GDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQL 551
G + P S RFW +RYHMPV+ + +QL
Sbjct: 2104 GLKSVPPNS---RFWAKMRYHMPVKNSQGFTWNQL 2199
>gb|U64092.1|CGU64092 Cercopithecidae gen. sp. type II interleukin-1 receptor mRNA,
complete cds
Length = 1257
Score = 131 bits (329), Expect = 2e-28
Identities = 95/314 (30%), Positives = 155/314 (49%), Gaps = 11/314 (3%)
Frame = +3
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+TW+K+DS V E+ +R+ LW +PA EDSG Y C RN+SYC ++ I +
Sbjct: 219 LTWHKNDSARMVPGEEETRMWAQDGALWLLPALQEDSGTYICTTRNASYCDKVSIELRVF 398
Query: 115 EN-EPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIH 173
EN + +L + + + Q L ++ G LVCP + F + + K+QWYKD PL DN
Sbjct: 399 ENTDASLPFIS---YPQILTLSTFGVLVCPDLREFTRDKTD-GKIQWYKDFLPLDKDNEK 566
Query: 174 FSGVK--DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSP 231
F V+ L+V +VA + G Y C ++ + G+QY ITR IE ++ + T PVI+SP
Sbjct: 567 FLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRNIELRIKKKKEETIPVIISP 746
Query: 232 ANETMEVDLGSQIQLICNV---TG-QLSDIAYWKWNGSVIDEDDP----VLGEDYYSVEN 283
+T+ LGS++ + C V TG L+ + +W N + ++ P G EN
Sbjct: 747 L-KTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHVESAYPGGRVTEGPRQEYSEN 923
Query: 284 PANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICV 343
N LI + + F CF +NT G + P F ++ +
Sbjct: 924 NENYIEVPLI----FDPVTRKDLNMVFKCFVRNTMGFQTLRTTVKEPPPTFSWGIVLAPL 1091
Query: 344 TLTVIIVCSVFIYK 357
L +++ +++++
Sbjct: 1092ALAFLVLGGIWMHR 1133
>gb|U64093.1|CGU64093 Cercopithecidae gen. sp. soluble type II interleukin-1 receptor
mRNA, complete cds
Length = 1084
Score = 125 bits (313), Expect = 1e-26
Identities = 80/225 (35%), Positives = 125/225 (55%), Gaps = 7/225 (3%)
Frame = +3
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+TW+K+DS V E+ +R+ LW +PA EDSG Y C RN+SYC ++ I +
Sbjct: 219 LTWHKNDSARMVPGEEETRMWAQDGALWLLPALQEDSGTYICTTRNASYCDKVSIELRVF 398
Query: 115 EN-EPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIH 173
EN + +L + + + Q L ++ G LVCP + F + + K+QWYKD PL DN
Sbjct: 399 ENTDASLPFIS---YPQILTLSTFGVLVCPDLREFTRDKTD-GKIQWYKDFLPLDKDNEK 566
Query: 174 FSGVK--DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSP 231
F V+ L+V +VA + G Y C ++ + G+QY ITR IE ++ + T PVI+SP
Sbjct: 567 FLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRNIELRIKKKKEETIPVIISP 746
Query: 232 ANETMEVDLGSQIQLICNV---TG-QLSDIAYWKWNGSVIDEDDP 272
+T+ LGS++ + C V TG L+ + +W N + ++ P
Sbjct: 747 L-KTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHVESAYP 878
>gb|U74649.1|HSU74649 Human interleukin-1 receptor type II mRNA, complete cds
Length = 1264
Score = 124 bits (312), Expect = 2e-26
Identities = 78/224 (34%), Positives = 122/224 (53%), Gaps = 6/224 (2%)
Frame = +3
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+TW+K+DS V E+ +R+ LW +PA EDSG Y C RN+SYC ++ I +
Sbjct: 234 LTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIEFRVF 413
Query: 115 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
EN + + Q L ++ G LVCP + F + ++ K+QWY+D L DN F
Sbjct: 414 ENTD--AFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDV-KIQWYRDSLLLDKDNEKF 584
Query: 175 SGVK--DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA 232
V+ L+V +VA++ G Y C ++ + G+QY ITR IE ++ + T PVI+SP
Sbjct: 585 LSVRGTTHLLVHDVAQEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPL 764
Query: 233 NETMEVDLGSQIQLICNV---TG-QLSDIAYWKWNGSVIDEDDP 272
+T+ LGS++ + C V TG L+ + +W N + I+ P
Sbjct: 765 -KTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYP 893
>gb|U64094.1|HSU64094 Human soluble type II interleukin-1 receptor mRNA, complete cds
Length = 1037
Score = 124 bits (311), Expect = 2e-26
Identities = 79/224 (35%), Positives = 121/224 (53%), Gaps = 6/224 (2%)
Frame = +2
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+TW+K+DS V E+ +R+ LW +PA EDSG Y C RN+SYC ++ I +
Sbjct: 260 LTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVF 439
Query: 115 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
EN + + Q L ++ G LVCP + F + ++ K+QWYKD L DN F
Sbjct: 440 ENTD--AFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDV-KIQWYKDSLLLDKDNEKF 610
Query: 175 SGVK--DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA 232
V+ L+V +VA + G Y C ++ + G+QY ITR IE ++ + T PVI+SP
Sbjct: 611 LSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPL 790
Query: 233 NETMEVDLGSQIQLICNV---TG-QLSDIAYWKWNGSVIDEDDP 272
+T+ LGS++ + C V TG L+ + +W N + I+ P
Sbjct: 791 -KTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYP 919
>ref|NM_004633.1| Homo sapiens interleukin 1 receptor, type II (IL1R2), mRNA
Length = 1286
Score = 124 bits (311), Expect = 2e-26
Identities = 79/224 (35%), Positives = 121/224 (53%), Gaps = 6/224 (2%)
Frame = +2
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+TW+K+DS V E+ +R+ LW +PA EDSG Y C RN+SYC ++ I +
Sbjct: 260 LTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVF 439
Query: 115 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
EN + + Q L ++ G LVCP + F + ++ K+QWYKD L DN F
Sbjct: 440 ENTD--AFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDV-KIQWYKDSLLLDKDNEKF 610
Query: 175 SGVK--DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA 232
V+ L+V +VA + G Y C ++ + G+QY ITR IE ++ + T PVI+SP
Sbjct: 611 LSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPL 790
Query: 233 NETMEVDLGSQIQLICNV---TG-QLSDIAYWKWNGSVIDEDDP 272
+T+ LGS++ + C V TG L+ + +W N + I+ P
Sbjct: 791 -KTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYP 919
>emb|X59770.1|HSIL1R2II H.sapiens IL-1R2 mRNA for type II interleukin-1 receptor, (cell
line CB23)
Length = 1308
Score = 124 bits (311), Expect = 2e-26
Identities = 79/224 (35%), Positives = 121/224 (53%), Gaps = 6/224 (2%)
Frame = +2
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+TW+K+DS V E+ +R+ LW +PA EDSG Y C RN+SYC ++ I +
Sbjct: 260 LTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVF 439
Query: 115 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
EN + + Q L ++ G LVCP + F + ++ K+QWYKD L DN F
Sbjct: 440 ENTD--AFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDV-KIQWYKDSLLLDKDNEKF 610
Query: 175 SGVK--DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA 232
V+ L+V +VA + G Y C ++ + G+QY ITR IE ++ + T PVI+SP
Sbjct: 611 LSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPL 790
Query: 233 NETMEVDLGSQIQLICNV---TG-QLSDIAYWKWNGSVIDEDDP 272
+T+ LGS++ + C V TG L+ + +W N + I+ P
Sbjct: 791 -KTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYP 919
>emb|AJ277831.1|MMU277831 Mus musculus mRNA for IL1RAPL-2 related protein
Length = 2028
Score = 122 bits (305), Expect = 1e-25
Identities = 79/280 (28%), Positives = 137/280 (48%), Gaps = 7/280 (2%)
Frame = +3
Query: 55 ITWY--KDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 112
+ WY K D + P+ + R+ + ++ +WF A+ +DSG Y CV+RNS+YC+++ +S
Sbjct: 1098 LMWYRNKGDLEEPIIFSEV-RMSKEEDAIWFHSAEEQDSGFYTCVLRNSTYCMKVSMSLT 1274
Query: 113 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI 172
ENE LCYN++ + +K V + CP M+ FK + E P + WYK+CKP + +I
Sbjct: 1275 VAENESGLCYNSRIRYLEKSEVTKRKEISCPDMDDFKKSDQE-PDVVWYKECKPKMWRSI 1451
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI-VSP 231
+ L++ V E+ GNYTC Y GK T ++ L +KP +P+ +
Sbjct: 1452 IIQ-KGNALLIQEVQEEDGGNYTCELKYE--GKLVRRTTELKVTALLTDKPPKPLFPMEN 1622
Query: 232 ANETMEVDLGSQIQLICNV----TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANK 287
++V LG + + C +G+ + YW I+E + E +
Sbjct: 1623 QPSVIDVQLGKPLNIPCKAFFGFSGESGPMIYWMKGEKFIEELAGHIREGEIRLLKEHLG 1802
Query: 288 RRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQL 327
+ +T++ S +E+ +TC +N +G A + L
Sbjct: 1803 EKEVELTLIFDSVVEADLAN--YTCHVENRNGRKHASVLL 1916
>ref|NM_010553.1| Mus musculus interleukin 18 receptor accessory protein (Il18rap),
mRNA
Length = 2499
Score = 120 bits (301), Expect = 4e-25
Identities = 129/519 (24%), Positives = 228/519 (43%), Gaps = 19/519 (3%)
Frame = +2
Query: 42 RPCPLNPNEHKGTITWYKDD-SKTPVSTEQASRIHQHKEKLWFVPAKVEDS-GHYYCVVR 99
+PC + + WY S +P+ + H E + + A +S Y C R
Sbjct: 647 KPCS-GSQKDLSDVQWYMQPRSGSPLEEISRNSPHMQSEGMLHILAPQTNSIWSYICRPR 823
Query: 100 -----NSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNE 154
+ + C++ + K + N+ A +Q L + G + CP + + +
Sbjct: 824 IRSPQDMACCIKTVLEVK---PQRNVSCGNTAQDEQVLLLGSTGSIHCPSLSC--QSDVQ 988
Query: 155 LPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIE 214
P++ WYKD + LL ++ K+ + + ++ ++G Y C + + + + V++
Sbjct: 989 SPEMTWYKDGR-LLPEH-----KKNPIEMADIYVFNQGLYVCDYTQSDNVSSWTVRAVVK 1150
Query: 215 FITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVT---GQLSD-IAYWKWNGSVIDED 270
T+ ++ +P I+ P +T++V+LG + L C V +LS + W S + +
Sbjct: 1151 VRTIGKDINVKPEILDPITDTLDVELGKPLTLPCRVQFGFQRLSKPVIKWYVKESTQEWE 1330
Query: 271 DPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 330
V E + + + + + E+ R F CFA+N+ G I+L
Sbjct: 1331 MSVFEEKRIQ----STFKNEVIERTIFLREVTQRDLSRKFVCFAQNSIGNTTRTIRLRKK 1498
Query: 331 V-TNFQKHMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYI 389
F ++G + L ++V + F+Y + I++VL R Y D K +DA++
Sbjct: 1499 EEVVFVYILLGTALMLVGVLVAAAFLYWYW-IEVVLLCRT--YKNKDETLGDKKEFDAFV 1669
Query: 390 LY-----PKTVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENV 444
Y P+T GS S+ + + PEVLE GY+L + RD G + I +
Sbjct: 1670 SYSNWSSPETDAVGSLSE-EHLALNLFPEVLEDTYGYRLCLLDRDVTPGGVYADDIVSII 1846
Query: 445 KKSRRLIIILVRETSGFSWLGGSS--EEQIAMYNALVQDGIKVVLLELEKIQDYEKMPES 502
KKSRR I IL S+L G E Q A+ ALV +K++L++ Q+ E +P
Sbjct: 1847 KKSRRGIFIL-----SPSYLNGPRVFELQAAVNLALVDQTLKLILIKFCSFQEPESLPYL 2011
Query: 503 IKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQ 541
+K + + W G A +RFW +RYHMPV+
Sbjct: 2012 VKKALRVLPTVTWKG---LKSVHASSRFWTQIRYHMPVK 2119
>gb|AF077347.1|AF077347 Mus musculus interleukin-18 receptor accessory protein-like mRNA,
complete cds
Length = 2499
Score = 120 bits (301), Expect = 4e-25
Identities = 129/519 (24%), Positives = 228/519 (43%), Gaps = 19/519 (3%)
Frame = +2
Query: 42 RPCPLNPNEHKGTITWYKDD-SKTPVSTEQASRIHQHKEKLWFVPAKVEDS-GHYYCVVR 99
+PC + + WY S +P+ + H E + + A +S Y C R
Sbjct: 647 KPCS-GSQKDLSDVQWYMQPRSGSPLEEISRNSPHMQSEGMLHILAPQTNSIWSYICRPR 823
Query: 100 -----NSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNE 154
+ + C++ + K + N+ A +Q L + G + CP + + +
Sbjct: 824 IRSPQDMACCIKTVLEVK---PQRNVSCGNTAQDEQVLLLGSTGSIHCPSLSC--QSDVQ 988
Query: 155 LPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIE 214
P++ WYKD + LL ++ K+ + + ++ ++G Y C + + + + V++
Sbjct: 989 SPEMTWYKDGR-LLPEH-----KKNPIEMADIYVFNQGLYVCDYTQSDNVSSWTVRAVVK 1150
Query: 215 FITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVT---GQLSD-IAYWKWNGSVIDED 270
T+ ++ +P I+ P +T++V+LG + L C V +LS + W S + +
Sbjct: 1151 VRTIGKDINVKPEILDPITDTLDVELGKPLTLPCRVQFGFQRLSKPVIKWYVKESTQEWE 1330
Query: 271 DPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 330
V E + + + + + E+ R F CFA+N+ G I+L
Sbjct: 1331 MSVFEEKRIQ----STFKNEVIERTIFLREVTQRDLSRKFVCFAQNSIGNTTRTIRLRKK 1498
Query: 331 V-TNFQKHMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYI 389
F ++G + L ++V + F+Y + I++VL R Y D K +DA++
Sbjct: 1499 EEVVFVYILLGTALMLVGVLVAAAFLYWYW-IEVVLLCRT--YKNKDETLGDKKEFDAFV 1669
Query: 390 LY-----PKTVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENV 444
Y P+T GS S+ + + PEVLE GY+L + RD G + I +
Sbjct: 1670 SYSNWSSPETDAVGSLSE-EHLALNLFPEVLEDTYGYRLCLLDRDVTPGGVYADDIVSII 1846
Query: 445 KKSRRLIIILVRETSGFSWLGGSS--EEQIAMYNALVQDGIKVVLLELEKIQDYEKMPES 502
KKSRR I IL S+L G E Q A+ ALV +K++L++ Q+ E +P
Sbjct: 1847 KKSRRGIFIL-----SPSYLNGPRVFELQAAVNLALVDQTLKLILIKFCSFQEPESLPYL 2011
Query: 503 IKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQ 541
+K + + W G A +RFW +RYHMPV+
Sbjct: 2012 VKKALRVLPTVTWKG---LKSVHASSRFWTQIRYHMPVK 2119
>dbj|AB033415.1|AB033415 Equus caballus IL-1RII mRNA for interleukin-1 receptor type II,
complete cds
Length = 1347
Score = 112 bits (280), Expect = 1e-22
Identities = 78/222 (35%), Positives = 115/222 (51%), Gaps = 8/222 (3%)
Frame = +2
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK-F 113
+TW K+DS V E+ +R+ LW +PA DSG Y C VRN+SYC + + F
Sbjct: 326 VTWRKNDSTRMVPEEEETRMWVQDNALWILPALQGDSGTYICTVRNASYCYEMSTELRVF 505
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIH 173
+ E L Y + + Q L ++ G LVCP + F ++ ++QWYKD L DN
Sbjct: 506 EKTEAALTYIS---YPQILTLSTSGLLVCPELSEFTRNKTDV-EVQWYKDSVLLDQDNEK 673
Query: 174 FSGV--KDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSP 231
F V RL+V NV+ + G Y+C + + G + ITR IE + + T PVIVSP
Sbjct: 674 FLSVAGPPRLLVQNVSMEDAGYYSCVMTLIHNGTRVNITRNIELRVQKRREETVPVIVSP 853
Query: 232 ANETMEVDLGSQIQLICNV-----TGQLSDIAYWKWNGSVID 268
+T+ LGS++ + C V T +D+ +W N + ID
Sbjct: 854 -RQTILASLGSRLIIPCKVFLGAGTQWTTDL-WWMANNTNID 973
>ref|XM_013114.2| Homo sapiens interleukin 1 receptor accessory protein-like 1
(IL1RAPL1), mRNA
Length = 2217
Score = 107 bits (266), Expect = 4e-21
Identities = 96/329 (29%), Positives = 160/329 (48%), Gaps = 17/329 (5%)
Frame = +1
Query: 241 GSQIQLICNV----TGQLSDIAYW-KWNGSVIDEDDPVLGEDYYSV--ENPANKRRSTLI 293
G L C +G +S + YW K + D D+ + E + E+ + S +
Sbjct: 1 GDSANLTCRAFFGYSGDVSPLIYWMKGEKFIEDLDENRVWESDIRILKEHLGEQEVSISL 180
Query: 294 TVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSV 353
V ++ E + Y +C+ +N +G A + L + + G + +++VC V
Sbjct: 181 IVDSVEEGDLGNY----SCYVENGNGRRHASVLLHKRELMYTVELAGGLGAILLLLVCLV 348
Query: 354 FIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGEG---STSDCDIFVFKV 410
IYK +KI+I+L+YR+ + D K YDAY+ Y K + T + + F ++
Sbjct: 349 TIYKCYKIEIMLFYRN--HFGAEELDGDNKDYDAYLSYTKVDPDQWNQETGEEERFALEI 522
Query: 411 LPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSWLGGSS-- 468
LP++LEK GYKLFI RD +E + V +S+RLII++ T + G S
Sbjct: 523 LPDMLEKHYGYKLFIPDRDLIPTGTYIEDVARCVDQSKRLIIVM---TPNYVVRRGWSIF 693
Query: 469 EEQIAMYNALVQDGIKVVLL---ELEKIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQS 525
E + + N LV IKV+L+ EL I +Y+++ E++K + I+W GP+
Sbjct: 694 ELETRLRNMLVTGEIKVILIECSELRGIMNYQEV-EALKHTIKLLTVIKW-----HGPKC 855
Query: 526 AK--TRFWKNVRYHMPVQRRSPSSKHQLL 552
K ++FWK ++Y MP +R P + Q L
Sbjct: 856 NKLNSKFWKRLQYEMPFKRIEPITHEQAL 942
>emb|X59769.1|MMIL1R2 Mouse Il-1r2 mRNA for type II interleukin-1 receptor, (cell line
70Z/3)
Length = 1360
Score = 105 bits (263), Expect = 9e-21
Identities = 106/384 (27%), Positives = 171/384 (43%), Gaps = 15/384 (3%)
Frame = +3
Query: 17 SLEADKC--KEREEKIILVSSANEIDVRPCPLNPNEHKGT-----ITWYKDDSKTPVSTE 69
++ D C + RE K L + +R CPL P+ + +TW K DS + +
Sbjct: 198 TVHGDNCQFRGREFKSELRLEGEPVVLR-CPLAPHSDISSSSHSFLTWSKLDSSQLIPRD 374
Query: 70 QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVEN-EPNLCYNAQAIF 128
+ R+ LW +PA +DSG Y C RN+S+C ++ + K +N E +L + + +
Sbjct: 375 EP-RMWVKGNILWILPAVQQDSGTYICTFRNASHCEQMSVELKVFKNTEASLPHVS---Y 542
Query: 129 KQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKD--RLIVMNV 186
Q ++ G LVCP ++ F + N + K+QWYK L N F D RL++ N
Sbjct: 543 LQISALSTTGLLVCPDLKEFISSNAD-GKIQWYKGAILLDKGNKEFLSAGDPTRLLISNT 719
Query: 187 AEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQL 246
+ G Y C ++TY G++Y ITR IE PVI+SP ET+ LGS++ +
Sbjct: 720 SMDDAGYYRCVMTFTYNGQEYNITRNIELRVKGTTTEPIPVIISPL-ETIPASLGSRLIV 896
Query: 247 ICNV---TGQLSD-IAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIE 302
C V TG S+ I +W N + I P G + + ++ + V I +
Sbjct: 897 PCKVFLGTGTSSNTIVWWLANSTFISAAYP-RGRVTEGLHHQYSENDENYVEVSLIFDPV 1073
Query: 303 SRFYKH-PFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIFKI 361
+R H F C A N + + + + F + ++L +++V ++
Sbjct: 1074TREDLHTDFKCVASNPRSSQSLHTTVKEVSSTFSWSIALAPLSLIILVVGAI-------- 1229
Query: 362 DIVLWYRDSCYDFLPIKASDGKTY 385
W R C K GKTY
Sbjct: 1230----WMRRRC------KRRAGKTY 1271
>ref|NM_010555.1| Mus musculus interleukin 1 receptor, type II (Il1r2), mRNA
Length = 1341
Score = 105 bits (263), Expect = 9e-21
Identities = 106/384 (27%), Positives = 171/384 (43%), Gaps = 15/384 (3%)
Frame = +3
Query: 17 SLEADKC--KEREEKIILVSSANEIDVRPCPLNPNEHKGT-----ITWYKDDSKTPVSTE 69
++ D C + RE K L + +R CPL P+ + +TW K DS + +
Sbjct: 198 TVHGDNCQFRGREFKSELRLEGEPVVLR-CPLAPHSDISSSSHSFLTWSKLDSSQLIPRD 374
Query: 70 QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVEN-EPNLCYNAQAIF 128
+ R+ LW +PA +DSG Y C RN+S+C ++ + K +N E +L + + +
Sbjct: 375 EP-RMWVKGNILWILPAVQQDSGTYICTFRNASHCEQMSVELKVFKNTEASLPHVS---Y 542
Query: 129 KQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKD--RLIVMNV 186
Q ++ G LVCP ++ F + N + K+QWYK L N F D RL++ N
Sbjct: 543 LQISALSTTGLLVCPDLKEFISSNAD-GKIQWYKGAILLDKGNKEFLSAGDPTRLLISNT 719
Query: 187 AEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQL 246
+ G Y C ++TY G++Y ITR IE PVI+SP ET+ LGS++ +
Sbjct: 720 SMDDAGYYRCVMTFTYNGQEYNITRNIELRVKGTTTEPIPVIISPL-ETIPASLGSRLIV 896
Query: 247 ICNV---TGQLSD-IAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIE 302
C V TG S+ I +W N + I P G + + ++ + V I +
Sbjct: 897 PCKVFLGTGTSSNTIVWWLANSTFISAAYP-RGRVTEGLHHQYSENDENYVEVSLIFDPV 1073
Query: 303 SRFYKH-PFTCFAKNTHGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVCSVFIYKIFKI 361
+R H F C A N + + + + F + ++L +++V ++
Sbjct: 1074TREDLHTDFKCVASNPRSSQSLHTTVKEVSSTFSWSIALAPLSLIILVVGAI-------- 1229
Query: 362 DIVLWYRDSCYDFLPIKASDGKTY 385
W R C K GKTY
Sbjct: 1230----WMRRRC------KRRAGKTY 1271
>ref|NM_053953.1| Rattus norvegicus interleukin 1 receptor, type II (Il1r2), mRNA
Length = 1380
Score = 105 bits (262), Expect = 1e-20
Identities = 98/357 (27%), Positives = 152/357 (42%), Gaps = 15/357 (4%)
Frame = +1
Query: 44 CPLNPNEH-----KGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVV 98
CPL P+ + +TW K DS + ++ R+ + LW +PA +DSG Y C
Sbjct: 313 CPLVPHSDTSSSSRSLLTWSKSDSSQLIPGDEP-RMWVKDDTLWVLPAVQQDSGTYICTF 489
Query: 99 RNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKL 158
RN+S+C ++ + K +N + Q ++ G LVCP ++ F + + K+
Sbjct: 490 RNASHCEQMSLELKVFKNTE--ASFPLVSYLQISALSSTGLLVCPDLKEFISSRTD-GKI 660
Query: 159 QWYKDCKPLLLDNIHF--SGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFI 216
QWYK L N F +G RL++ N + G Y C ++TY GK+Y ITR IE
Sbjct: 661 QWYKGSILLDKGNKKFLSAGDPTRLLISNTSMGDAGYYRCVMTFTYEGKEYNITRNIELR 840
Query: 217 TLEENKPTRPVIVSPANETMEVDLGSQIQLICNV---TGQLSD-IAYWKWNGSVIDEDDP 272
PVI+SP ET+ LGS++ + C V TG S+ I +W N + I P
Sbjct: 841 VKGITTEPIPVIISPL-ETIPASLGSRLIVPCKVFLGTGTSSNTIVWWMANSTFISVAYP 1017
Query: 273 ----VLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLI 328
G + EN N +LI + F C A N + + +
Sbjct: 1018RGRVTEGLHHQYSENDENYVEVSLI----FDPVTKEDLNTDFKCVATNPRSFQSLHTTVK 1185
Query: 329 YPVTNFQKHMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTY 385
+ F + ++L +++V ++ W R C K GKTY
Sbjct: 1186EVSSTFSWGIALAPLSLIILVVGAI------------WIRRRC------KRQAGKTY 1302
>emb|Z22812.1|RNINL1R2A R.norvegicus interleukin-1 receptor type 2
Length = 1380
Score = 105 bits (262), Expect = 1e-20
Identities = 98/357 (27%), Positives = 152/357 (42%), Gaps = 15/357 (4%)
Frame = +1
Query: 44 CPLNPNEH-----KGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVV 98
CPL P+ + +TW K DS + ++ R+ + LW +PA +DSG Y C
Sbjct: 313 CPLVPHSDTSSSSRSLLTWSKSDSSQLIPGDEP-RMWVKDDTLWVLPAVQQDSGTYICTF 489
Query: 99 RNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKL 158
RN+S+C ++ + K +N + Q ++ G LVCP ++ F + + K+
Sbjct: 490 RNASHCEQMSLELKVFKNTE--ASFPLVSYLQISALSSTGLLVCPDLKEFISSRTD-GKI 660
Query: 159 QWYKDCKPLLLDNIHF--SGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFI 216
QWYK L N F +G RL++ N + G Y C ++TY GK+Y ITR IE
Sbjct: 661 QWYKGSILLDKGNKKFLSAGDPTRLLISNTSMGDAGYYRCVMTFTYEGKEYNITRNIELR 840
Query: 217 TLEENKPTRPVIVSPANETMEVDLGSQIQLICNV---TGQLSD-IAYWKWNGSVIDEDDP 272
PVI+SP ET+ LGS++ + C V TG S+ I +W N + I P
Sbjct: 841 VKGITTEPIPVIISPL-ETIPASLGSRLIVPCKVFLGTGTSSNTIVWWMANSTFISVAYP 1017
Query: 273 ----VLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLI 328
G + EN N +LI + F C A N + + +
Sbjct: 1018RGRVTEGLHHQYSENDENYVEVSLI----FDPVTKEDLNTDFKCVATNPRSFQSLHTTVK 1185
Query: 329 YPVTNFQKHMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTY 385
+ F + ++L +++V ++ W R C K GKTY
Sbjct: 1186EVSSTFSWGIALAPLSLIILVVGAI------------WIRRRC------KRQAGKTY 1302
>dbj|AB041748.1|AB041740S9 Gallus gallus gene for ST2L, ST2LV, complete cds
Length = 1858
Score = 103 bits (256), Expect = 6e-20
Identities = 49/113 (43%), Positives = 76/113 (66%)
Frame = +2
Query: 435 DIVEVINENVKKSRRLIIILVRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQ 494
D I + ++KSRRLII+L ++ L + ++ IA+YNAL+Q+ KV+LLE+EK+
Sbjct: 239 DKANAIEKRIQKSRRLIILLTQQLINCQEL--NYDQHIALYNALIQNDTKVILLEMEKMG 412
Query: 495 DYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSS 547
YE + ES+++I ++ G ++W T PQS+ ++FWK+VRYHMPV RS S
Sbjct: 413 SYENLQESLRYIIKQQGTVKWKEQHTVHPQSSNSKFWKHVRYHMPVTLRSSDS 571
>gb|M24843.1|MUST1A Mouse T1 protein mRNA, complete cds
Length = 2653
Score = 102 bits (254), Expect = 1e-19
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 10/283 (3%)
Frame = +3
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+ WY D+ + T++ +RI +++L F+PA+VEDSG Y CV+R+ + ++
Sbjct: 345 VEWYYSDTNESIPTQKRNRIFVSRDRLKFLPARVEDSGIYACVIRSPNLNKTGYLNVTIH 524
Query: 115 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
+ P+ ++ + + CP ++ + N +QW+K+CK L F
Sbjct: 525 KKPPSCNIPDYLMYSTVRGSDKNFKITCPTIDLY----NWTAPVQWFKNCK--ALQEPRF 686
Query: 175 SGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA-N 233
+ L + NV G+YTC ++ G Y +T F E+ PVI +P N
Sbjct: 687 RAHRSYLFIDNVTHDDEGDYTCQFTHVENGTNYIVTATRSFTVEEKGFSMFPVITNPPYN 866
Query: 234 ETMEVDLGSQIQLICNV-----TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKR 288
TMEV++G + C+ + L+D+ W+ N +V+ GE E N+
Sbjct: 867 HTMEVEIGKPASIACSACFGKGSHFLADV-LWQINKTVVGN----FGEARIQEEEGRNES 1031
Query: 289 RST----LITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQL 327
S L +VL I+ + + + C A N HG+ I+L
Sbjct: 1032SSNDMDCLTSVLRITGVTEKDLSLEYDCLALNLHGMIRHTIRL 1160
>ref|NM_010743.1| Mus musculus interleukin 1 receptor-like 1 (Il1rl1), mRNA
Length = 2667
Score = 102 bits (254), Expect = 1e-19
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 10/283 (3%)
Frame = +2
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+ WY D+ + T++ +RI +++L F+PA+VEDSG Y CV+R+ + ++
Sbjct: 371 VEWYYSDTNESIPTQKRNRIFVSRDRLKFLPARVEDSGIYACVIRSPNLNKTGYLNVTIH 550
Query: 115 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
+ P+ ++ + + CP ++ + N +QW+K+CK L F
Sbjct: 551 KKPPSCNIPDYLMYSTVRGSDKNFKITCPTIDLY----NWTAPVQWFKNCK--ALQEPRF 712
Query: 175 SGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA-N 233
+ L + NV G+YTC ++ G Y +T F E+ PVI +P N
Sbjct: 713 RAHRSYLFIDNVTHDDEGDYTCQFTHVENGTNYIVTATRSFTVEEKGFSMFPVITNPPYN 892
Query: 234 ETMEVDLGSQIQLICNV-----TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKR 288
TMEV++G + C+ + L+D+ W+ N +V+ GE E N+
Sbjct: 893 HTMEVEIGKPASIACSACFGKGSHFLADV-LWQINKTVVGN----FGEARIQEEEGRNES 1057
Query: 289 RST----LITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQL 327
S L +VL I+ + + + C A N HG+ I+L
Sbjct: 1058SSNDMDCLTSVLRITGVTEKDLSLEYDCLALNLHGMIRHTIRL 1186
>emb|Y07519.1|MMST2 Mouse ST2 gene
Length = 2646
Score = 102 bits (254), Expect = 1e-19
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 10/283 (3%)
Frame = +3
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+ WY D+ + T++ +RI +++L F+PA+VEDSG Y CV+R+ + ++
Sbjct: 348 VEWYYSDTNESIPTQKRNRIFVSRDRLKFLPARVEDSGIYACVIRSPNLNKTGYLNVTIH 527
Query: 115 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
+ P+ ++ + + CP ++ + N +QW+K+CK L F
Sbjct: 528 KKPPSCNIPDYLMYSTVRGSDKNFKITCPTIDLY----NWTAPVQWFKNCK--ALQEPRF 689
Query: 175 SGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA-N 233
+ L + NV G+YTC ++ G Y +T F E+ PVI +P N
Sbjct: 690 RAHRSYLFIDNVTHDDEGDYTCQFTHAENGTNYIVTATRSFTVEEKGFSMFPVITNPPYN 869
Query: 234 ETMEVDLGSQIQLICNV-----TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKR 288
TMEV++G + C+ + L+D+ W+ N +V+ GE E N+
Sbjct: 870 HTMEVEIGKPASIACSACFGKGSHFLADV-LWQINKTVVGN----FGEARIQEEEGRNES 1034
Query: 289 RST----LITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQL 327
S L +VL I+ + + + C A N HG+ I+L
Sbjct: 1035SSNDMDCLTSVLRITGVTEKDLSLEYDCLALNLHGMIRHTIRL 1163
>gb|BC012346.1|BC012346 Homo sapiens, Similar to interleukin 1 receptor, type II, clone
IMAGE:4562827, mRNA
Length = 1430
Score = 102 bits (254), Expect = 1e-19
Identities = 60/162 (37%), Positives = 88/162 (54%), Gaps = 2/162 (1%)
Frame = +2
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+TW+K+DS V E+ +R+ LW +PA EDSG Y C RN+SYC ++ I +
Sbjct: 380 LTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVF 559
Query: 115 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
EN + + Q L ++ G LVCP + F + ++ K+QWYKD L DN F
Sbjct: 560 ENTD--AFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDV-KIQWYKDSLLLDKDNEKF 730
Query: 175 SGVK--DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIE 214
V+ L+V +VA + G Y C ++ + G+QY ITR IE
Sbjct: 731 LSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIE 856
>ref|NM_013037.1| Rattus norvegicus Interleukin 1 receptor-like 1 (Fos-responsive
gene 1) (St2), mRNA
Length = 2586
Score = 101 bits (252), Expect = 2e-19
Identities = 78/297 (26%), Positives = 128/297 (42%), Gaps = 13/297 (4%)
Frame = +1
Query: 37 NEIDVRPCP-----LNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDS 91
NE + CP +NP E WY ++ + T++ +RI +++L F+PAKVEDS
Sbjct: 304 NEALIVRCPQRGGAINPVE------WYYSNTNERIPTQKRNRIFVSRDRLKFLPAKVEDS 465
Query: 92 GHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNE 151
G Y CV+R+ ++ + PN ++ + + CP + +
Sbjct: 466 GIYTCVIRSPESIKTGSLNVTIYKRPPNCKIPDYMMYSTVDGSDKNSKITCPTIALY--- 636
Query: 152 NNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITR 211
N +QW+K+CK L F L + V+ G+YTC ++T G Y +T
Sbjct: 637 -NWTAPVQWFKNCK--ALQGPRFRAHMSYLFIDKVSHVDEGDYTCRFTHTENGTNYIVTA 807
Query: 212 VIEFITLEENKPTRPVIVSPA-NETMEVDLGSQIQLICNV---TGQLSDIAYWKWNGSVI 267
F E+ T PVI +P N T+EV++G + C+ T W+ N + I
Sbjct: 808 TRSFTVEEKGFSTFPVITNPPHNYTVEVEIGKTANIACSACFGTASQFVAVLWQINKTRI 987
Query: 268 DEDDPVLGEDYYSVENPANKRRST----LITVLNISEIESRFYKHPFTCFAKNTHGI 320
G+ E NK S L ++L I+ + + + + C A N HG+
Sbjct: 988 GS----FGKARIQEEKGPNKSSSNGMICLTSLLRITGVTDKDFSLKYDCVAMNHHGV 1146
>gb|U04319.1|RNU04319 Rattus norvegicus Fit-1S (Fit-1) mRNA, complete cds
Length = 2586
Score = 101 bits (252), Expect = 2e-19
Identities = 78/297 (26%), Positives = 128/297 (42%), Gaps = 13/297 (4%)
Frame = +1
Query: 37 NEIDVRPCP-----LNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDS 91
NE + CP +NP E WY ++ + T++ +RI +++L F+PAKVEDS
Sbjct: 304 NEALIVRCPQRGGAINPVE------WYYSNTNERIPTQKRNRIFVSRDRLKFLPAKVEDS 465
Query: 92 GHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNE 151
G Y CV+R+ ++ + PN ++ + + CP + +
Sbjct: 466 GIYTCVIRSPESIKTGSLNVTIYKRPPNCKIPDYMMYSTVDGSDKNSKITCPTIALY--- 636
Query: 152 NNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITR 211
N +QW+K+CK L F L + V+ G+YTC ++T G Y +T
Sbjct: 637 -NWTAPVQWFKNCK--ALQGPRFRAHMSYLFIDKVSHVDEGDYTCRFTHTENGTNYIVTA 807
Query: 212 VIEFITLEENKPTRPVIVSPA-NETMEVDLGSQIQLICNV---TGQLSDIAYWKWNGSVI 267
F E+ T PVI +P N T+EV++G + C+ T W+ N + I
Sbjct: 808 TRSFTVEEKGFSTFPVITNPPHNYTVEVEIGKTANIACSACFGTASQFVAVLWQINKTRI 987
Query: 268 DEDDPVLGEDYYSVENPANKRRST----LITVLNISEIESRFYKHPFTCFAKNTHGI 320
G+ E NK S L ++L I+ + + + + C A N HG+
Sbjct: 988 GS----FGKARIQEEKGPNKSSSNGMICLTSLLRITGVTDKDFSLKYDCVAMNHHGV 1146
>ref|NM_003856.1| Homo sapiens interleukin 1 receptor-like 1 (IL1RL1), mRNA
Length = 1357
Score = 94.0 bits (232), Expect = 4e-17
Identities = 74/301 (24%), Positives = 130/301 (42%), Gaps = 10/301 (3%)
Frame = +2
Query: 37 NEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYC 96
NE + CP + T+ WY + + T++ +R+ + L F+PA+V DSG Y C
Sbjct: 131 NEALIVRCP-RQGKPSYTVDWYYSQTNKSIPTQERNRVFASGQLLKFLPAEVADSGIYTC 307
Query: 97 VVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELP 156
+VR+ ++ + + + + ++ + + CP ++ + N
Sbjct: 308 IVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYSTVSGSEKNSKIYCPTIDLY----NWTA 475
Query: 157 KLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEF- 215
L+W+K+C+ L + K L++ NV + G+YTC + G Y +T F
Sbjct: 476 PLEWFKNCQ--ALQGSRYRAHKSFLVIDNVMTEDAGDYTCKFIHNENGANYSVTATRSFT 649
Query: 216 ITLEENKPTRPVIVSPA-NETMEVDLGSQIQLICNVT----GQLSDIAYWKWNGSVIDED 270
+ E+ PVI +PA NE EV++G L C+ Q W+ NG+ I +
Sbjct: 650 VKDEQGFSLFPVIGAPAQNEIKEVEIGKNANLTCSACFGKGTQFLAAVLWQLNGTKITD- 826
Query: 271 DPVLGEDYYSVENPANKRRST----LITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQ 326
GE E N+ S L VL I++++ + C A N HG+ ++
Sbjct: 827 ---FGEPRIQQEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQYDCLALNLHGLRRHTVR 997
Query: 327 L 327
L
Sbjct: 998 L 1000
>dbj|D12763.1|HUMST2M Homo sapiens mRNA for ST2 protein
Length = 1357
Score = 94.0 bits (232), Expect = 4e-17
Identities = 74/301 (24%), Positives = 130/301 (42%), Gaps = 10/301 (3%)
Frame = +2
Query: 37 NEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYC 96
NE + CP + T+ WY + + T++ +R+ + L F+PA+V DSG Y C
Sbjct: 131 NEALIVRCP-RQGKPSYTVDWYYSQTNKSIPTQERNRVFASGQLLKFLPAEVADSGIYTC 307
Query: 97 VVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELP 156
+VR+ ++ + + + + ++ + + CP ++ + N
Sbjct: 308 IVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYSTVSGSEKNSKIYCPTIDLY----NWTA 475
Query: 157 KLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEF- 215
L+W+K+C+ L + K L++ NV + G+YTC + G Y +T F
Sbjct: 476 PLEWFKNCQ--ALQGSRYRAHKSFLVIDNVMTEDAGDYTCKFIHNENGANYSVTATRSFT 649
Query: 216 ITLEENKPTRPVIVSPA-NETMEVDLGSQIQLICNVT----GQLSDIAYWKWNGSVIDED 270
+ E+ PVI +PA NE EV++G L C+ Q W+ NG+ I +
Sbjct: 650 VKDEQGFSLFPVIGAPAQNEIKEVEIGKNANLTCSACFGKGTQFLAAVLWQLNGTKITD- 826
Query: 271 DPVLGEDYYSVENPANKRRST----LITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQ 326
GE E N+ S L VL I++++ + C A N HG+ ++
Sbjct: 827 ---FGEPRIQQEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQYDCLALNLHGLRRHTVR 997
Query: 327 L 327
L
Sbjct: 998 L 1000
>gb|BC021159.1|BC021159 Mus musculus, Similar to interleukin 1 receptor accessory protein,
clone MGC:14036 IMAGE:4161899, mRNA, complete cds
Length = 1916
Score = 83.2 bits (204), Expect = 6e-14
Identities = 68/284 (23%), Positives = 131/284 (45%), Gaps = 18/284 (6%)
Frame = +1
Query: 54 TITWY----KDDSKTPVSTE-QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 108
T+ WY D + P++ +RI + K+ LWF P + D+G+Y C++RN++YC ++
Sbjct: 331 TLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVA 510
Query: 109 ISAKFVENEPNLCYNAQAIFK-QKLPVA-GDGGLVCPYMEFFKNENNELPKLQWYKDCKP 166
+ V+ + C+N+ F K+ + G + CP ++ + ++ P + WYK C
Sbjct: 511 FPLEVVQKDS--CFNSAMRFPVHKMYIEHGIHKITCPNVDGY-FPSSVKPSVTWYKGCTE 681
Query: 167 LL-LDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTR 225
++ N+ G+ + V+ + GNYTC +Y G+ + +TR + + K
Sbjct: 682 IVDFHNVLPEGMNLSFFIPLVS--NNGNYTCVVTYPENGRLFHLTRTVTVKVVGSPKDAL 855
Query: 226 PVIVSPANETM--EVDLGSQIQLICNVTGQL----SDIAYWKWNGSVIDE--DDPVLGE- 276
P + N+ + E + G ++ + C V + +W +G D+ D + E
Sbjct: 856 PPQIYSPNDRVVYEKEPGEELVIPCKVYFSFIMDSHNEVWWTIDGKKPDDVTVDITINES 1035
Query: 277 -DYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 319
Y S E+ T +L+I ++ + + C A+NT G
Sbjct: 1036VSYSSTED------ETRTQILSIKKVTPEDLRRNYVCHARNTKG 1149
>ref|XM_036436.4| Homo sapiens interleukin 1 receptor accessory protein (IL1RAP),
mRNA
Length = 2041
Score = 82.8 bits (203), Expect = 8e-14
Identities = 65/284 (22%), Positives = 127/284 (43%), Gaps = 18/284 (6%)
Frame = +3
Query: 54 TITWY----KDDSKTPVSTE-QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 108
T+ WY D + P++ +RI + K+ LWF P + D+G+Y C++RN++YC ++
Sbjct: 405 TLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVA 584
Query: 109 ISAKFVENEPNLCYNAQAIFKQKLPV------AGDGGLVCPYMEFFKNENNELPKLQWYK 162
+ V+ + C+N+ KLPV G + CP ++ + ++ P + WY
Sbjct: 585 FPLEVVQKDS--CFNS----PMKLPVHKLYIEYGIQRITCPNVDGY-FPSSVKPTITWYM 743
Query: 163 DC-KPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN 221
C K +N+ G+ ++ ++ + GNYTC +Y G+ + +TR + +
Sbjct: 744 GCYKIQNFNNVIPEGMNLSFLIALIS--NNGNYTCVVTYPENGRTFHLTRTLTVKVVGSP 917
Query: 222 KPTRPVIVSPANE--TMEVDLGSQIQLICNVTGQL----SDIAYWKWNGSVIDEDDPVLG 275
K P ++ N+ E + G ++ + C V + +W +G DD +
Sbjct: 918 KNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGK--KPDDITID 1091
Query: 276 EDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 319
+ + T +L+I ++ S K + C A++ G
Sbjct: 1092VTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKG 1223
>gb|AF167343.1|AF167343 Homo sapiens soluble interleukin-1 receptor accessory protein
(IL1RAP) mRNA, complete cds
Length = 1857
Score = 82.8 bits (203), Expect = 8e-14
Identities = 65/284 (22%), Positives = 127/284 (43%), Gaps = 18/284 (6%)
Frame = +1
Query: 54 TITWY----KDDSKTPVSTE-QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 108
T+ WY D + P++ +RI + K+ LWF P + D+G+Y C++RN++YC ++
Sbjct: 199 TLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVA 378
Query: 109 ISAKFVENEPNLCYNAQAIFKQKLPV------AGDGGLVCPYMEFFKNENNELPKLQWYK 162
+ V+ + C+N+ KLPV G + CP ++ + ++ P + WY
Sbjct: 379 FPLEVVQKDS--CFNS----PMKLPVHKLYIEYGIQRITCPNVDGY-FPSSVKPTITWYM 537
Query: 163 DC-KPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN 221
C K +N+ G+ ++ ++ + GNYTC +Y G+ + +TR + +
Sbjct: 538 GCYKIQNFNNVIPEGMNLSFLIALIS--NNGNYTCVVTYPENGRTFHLTRTLTVKVVGSP 711
Query: 222 KPTRPVIVSPANE--TMEVDLGSQIQLICNVTGQL----SDIAYWKWNGSVIDEDDPVLG 275
K P ++ N+ E + G ++ + C V + +W +G DD +
Sbjct: 712 KNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGK--KPDDITID 885
Query: 276 EDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 319
+ + T +L+I ++ S K + C A++ G
Sbjct: 886 VTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKG 1017
>dbj|AB041737.2|AB041737 Gallus gallus mRNA for ST2, complete cds
Length = 1352
Score = 82.4 bits (202), Expect = 1e-13
Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 10/275 (3%)
Frame = +2
Query: 55 ITWYKDDSKTPV-STEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLR-IKISAK 112
+TW+ ++ + E+ SR+ LWF+P +EDSG+Y CV+ + K++ +
Sbjct: 227 VTWHHTGTRKRIPEEEEGSRVFSKGIFLWFLPTSLEDSGNYTCVINYPDGSKKERKMNVQ 406
Query: 113 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI 172
+ C+ ++ ++ + G + CP ++N +QWYKDC+P+ +
Sbjct: 407 VHPYKQGTCFPSRILYANE---TRKGKISCPTFRNYENAT----IIQWYKDCRPIQGERY 565
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA 232
+ + N+ ++ G YTC +YT+ G+ + ++ F++ ++ I+ P
Sbjct: 566 FMH--DPYIFIENLNKEDDGYYTCQFTYTHRGRVFNVSATRIFVSEAKHSSLPVQILFPK 739
Query: 233 NE-TMEVDLGSQIQLIC----NVTGQLSDIAYW---KWNGSVIDEDDPVLGEDYYSVENP 284
+E +EV+LG+ L C + Q + W K DE+ Y+ ++
Sbjct: 740 DEDVLEVELGAAFSLKCQARLGIKKQPIAVVTWDVNKMPAEYADEEKIRQEFSYFEGQHQ 919
Query: 285 ANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 319
+T L IS IE + F+C A N G
Sbjct: 920 EYYGEAT----LTISNIEHTDLQSSFSCVAMNEMG 1012
>gb|BC004628.1|BC004628 Mus musculus, clone IMAGE:3585952, mRNA
Length = 728
Score = 82.0 bits (201), Expect = 1e-13
Identities = 54/174 (31%), Positives = 87/174 (49%), Gaps = 12/174 (6%)
Frame = +2
Query: 1 MKVLLRLICFIA-LLISSLEADKCKEREEKIILVSSANEIDVRPCPLN---PNEHKGTI- 55
M V L C + LL+ + AD C++ +++S +P P N P E G +
Sbjct: 194 MGVTSLLFCGVFFLLLLFVAADTCEDIFMHNVIISEG-----QPFPFNCTYPPETNGAVN 358
Query: 56 -TWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
TWYK SK+PVS + R+HQ + + F+P +EDSG Y CV+RN+ C +I ++ +
Sbjct: 359 LTWYKTPSKSPVSNNRHLRVHQDQTWILFLPLTLEDSGIYQCVIRNAHNCYQIAVNLTVL 538
Query: 115 ENE------PNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYK 162
+N N+ +++Q LP+ G L C + E+ L ++WYK
Sbjct: 539 KNHWCDSSMEGSPVNSPDVYQQILPIGKSGSLNC---HLYFPESCALDSIKWYK 691
>emb|AJ276474.2|OMY276474 Oncorhynchus mykiss mRNA for interleukin-1 receptor type II
(IL-1rII gene)
Length = 1560
Score = 78.2 bits (191), Expect = 2e-12
Identities = 76/327 (23%), Positives = 128/327 (38%), Gaps = 39/327 (11%)
Frame = +1
Query: 73 RIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKL 132
R+ Q + +LW +PA+ DSG Y C+ RN + C+ + + E + + +
Sbjct: 361 RVLQRERQLWLLPARTSDSGAYSCIYRNDTLCVIGSFTLQVYETKQTDI--EKLSYPIST 534
Query: 133 PVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLL---DNIHFSGVKDRLIVMNVAEK 189
PV + CP+++ F N +++WYKD P +L + +D +++ +V
Sbjct: 535 PVGKKLSIRCPHLKDF----NRTDEIEWYKDSSPTVLPVGSGRYQRQRQDVILISDVRPA 702
Query: 190 HRGNYTCHASYTYLGKQYPITRVIE------------------------------FITLE 219
+G YTC QY ++R I T+E
Sbjct: 703 DQGLYTCQLRVHVNNLQYTVSRTINLNVKVPDPVPYIQTTRPIFDPDTTLTPNPGLSTVE 882
Query: 220 ENKPTRPVIVSPANETM-EVDLGSQIQLICNV-TGQLS---DIAYWKWNGSVIDEDDPVL 274
P IVSPAN T+ E LGS +++ C V TG S + W +G +D + +
Sbjct: 883 PPAVVSPKIVSPANGTIFESPLGSVLEISCQVFTGSQSADATMVTWLVDGHSLDSSN-LG 1059
Query: 275 GEDYYSVENPANKRRSTLITV-LNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTN 333
G S + V L I E+ + C +N G Q
Sbjct: 1060GRALMSQRRVTTVAGGCYVEVNLYIIELCDEDTRAELKCVTQNQGGRQEVIAQFRVEDPR 1239
Query: 334 FQKHMIGICVTLTVIIVCSVFIYKIFK 360
M+G+ ++ + V S+F+Y + K
Sbjct: 1240STWLMVGVAGSVCFLTVVSIFLYLLLK 1320
>gb|BC016141.1|BC016141 Homo sapiens, interleukin 1 receptor accessory protein, clone
IMAGE:3920152, mRNA
Length = 1549
Score = 76.3 bits (186), Expect = 8e-12
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 14/211 (6%)
Frame = +2
Query: 54 TITWY----KDDSKTPVSTE-QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 108
T+ WY D + P++ +RI + K+ LWF P + D+G+Y C++RN++YC ++
Sbjct: 404 TLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVA 583
Query: 109 ISAKFVENEPNLCYNAQAIFKQKLPV------AGDGGLVCPYMEFFKNENNELPKLQWYK 162
+ V+ + C+N+ KLPV G + CP ++ + ++ P + WY
Sbjct: 584 FPLEVVQKDS--CFNS----PMKLPVHKLYIEYGIQRITCPNVDGY-FPSSVKPTITWYM 742
Query: 163 DC-KPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN 221
C K +N+ G+ ++ ++ + GNYTC +Y G+ + +TR + +
Sbjct: 743 GCYKIQNFNNVIPEGMNLSFLIALIS--NNGNYTCVVTYPENGRTFHLTRTLTVKVVGSP 916
Query: 222 KPTRPVIVSPANE--TMEVDLGSQIQLICNV 250
K P ++ N+ E + G ++ + C V
Sbjct: 917 KNAVPPVIHSPNDHVVYEKEPGEELLIPCTV 1009
>gb|BC012580.1|BC012580 Homo sapiens, Similar to interleukin 1 receptor-like 1, clone
IMAGE:4043930, mRNA
Length = 918
Score = 70.1 bits (170), Expect = 5e-10
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 1/199 (0%)
Frame = +3
Query: 37 NEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYC 96
NE + CP + T+ WY + + T++ +R+ + L F+PA+V DSG Y C
Sbjct: 318 NEALIVRCP-RQGKPSYTVDWYYSQTNKSIPTQERNRVFASGQLLKFLPAEVADSGIYTC 494
Query: 97 VVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELP 156
+VR+ ++ + + + + ++ + + CP ++ + N
Sbjct: 495 IVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYSTVSGSEKNSKIYCPTIDLY----NWTA 662
Query: 157 KLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEF- 215
L+W+K+C+ L + K L++ NV + G+YTC + G Y +T F
Sbjct: 663 PLEWFKNCQ--ALQGSRYRAHKSFLVIDNVMTEDAGDYTCKFIHNENGANYSVTATRSFT 836
Query: 216 ITLEENKPTRPVIVSPANE 234
+ E+ PVI +PA +
Sbjct: 837 VKDEQGFSLFPVIGAPAQK 893
>ref|NM_023059.1| Mus musculus single Ig IL-1 receptor related protein
(Sigirr-pending), mRNA
Length = 1540
Score = 68.9 bits (167), Expect = 1e-09
Identities = 54/208 (25%), Positives = 94/208 (44%), Gaps = 5/208 (2%)
Frame = +1
Query: 337 HMIGICVTLTVIIVCSV--FIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKT 394
H+ + +L V++V + +Y +++++LWY+D+ + ++ +DGK YDAY+ Y
Sbjct: 463 HVAAVLASLLVLVVLLLVALLYVKCRLNMLLWYQDT---YREVEMNDGKLYDAYVSY--- 624
Query: 395 VGEGSTSDCDI---FVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLI 451
SDC FV +L LE++ GYKLF+ RD D + N+ + RRLI
Sbjct: 625 ------SDCPEDRKFVNFILKPQLERRRGYKLFLEDRDLLPRADASADLLVNLSRCRRLI 786
Query: 452 IILVRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHG 511
++L W S E A Y + D + L + Y + S + +
Sbjct: 787 VVLSDAFLSRPWCSQSFREDCAAYWSSPAD-LSSSPLRARGVSPYTLLSGSCRHDRHLVT 963
Query: 512 AIRWSGDFTQGPQSAKTRFWKNVRYHMP 539
+ W G + + FWK ++ +P
Sbjct: 964 LVLWK----PGSVTPSSDFWKELQLALP 1035
>gb|AF113795.1|AF113795 Mus musculus toll/interleukin-1 receptor 8 (TIR8) mRNA, complete
cds
Length = 1540
Score = 68.9 bits (167), Expect = 1e-09
Identities = 54/208 (25%), Positives = 94/208 (44%), Gaps = 5/208 (2%)
Frame = +1
Query: 337 HMIGICVTLTVIIVCSV--FIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKT 394
H+ + +L V++V + +Y +++++LWY+D+ + ++ +DGK YDAY+ Y
Sbjct: 463 HVAAVLASLLVLVVLLLVALLYVKCRLNMLLWYQDT---YREVEMNDGKLYDAYVSY--- 624
Query: 395 VGEGSTSDCDI---FVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLI 451
SDC FV +L LE++ GYKLF+ RD D + N+ + RRLI
Sbjct: 625 ------SDCPEDRKFVNFILKPQLERRRGYKLFLEDRDLLPRADASADLLVNLSRCRRLI 786
Query: 452 IILVRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHG 511
++L W S E A Y + D + L + Y + S + +
Sbjct: 787 VVLSDAFLSRPWCSQSFREDCAAYWSSPAD-LSSSPLRARGVSPYTLLSGSCRHDRHLVT 963
Query: 512 AIRWSGDFTQGPQSAKTRFWKNVRYHMP 539
+ W G + + FWK ++ +P
Sbjct: 964 LVLWK----PGSVTPSSDFWKELQLALP 1035
>ref|NM_021805.1| Homo sapiens single Ig IL-1R-related molecule (SIGIRR), mRNA
Length = 1695
Score = 68.6 bits (166), Expect = 2e-09
Identities = 75/325 (23%), Positives = 145/325 (44%), Gaps = 11/325 (3%)
Frame = +2
Query: 226 PVIVSPA-NETMEVDLGSQIQLICN---VTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSV 281
P +SP+ ++ + LGS + L C V+G + +W + + P+ +YS+
Sbjct: 251 PDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQW----LKDGLPLGIGGHYSL 418
Query: 282 EN----PANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKH 337
AN + +VL ++ + Y FTC +N + +Q P ++
Sbjct: 419 HEYSWVKANLSEVLVSSVLGVNVTSTEVYG-AFTCSIQNI-SFSSFTLQRAGPTSHVAAV 592
Query: 338 MIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGE 397
+ + V L +++ + +Y +++++LWY+D+ + ++ +DGK YDAY+ Y
Sbjct: 593 LASLLVLLALLL--AALLYVKCRLNVLLWYQDA---YGEVEINDGKLYDAYVSY------ 739
Query: 398 GSTSDCD---IFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIIL 454
SDC FV +L LE++ GYKLF+ RD + + N+ + RRLI++L
Sbjct: 740 ---SDCPEDRKFVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVL 910
Query: 455 VRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIR 514
+W S E + L + I + + Q + +++ ++Q H +
Sbjct: 911 SDAFLSRAWCSHSFREGLCRLLELTRRPIFITF----EGQRRDPAHPALRLLRQ-HRHLV 1075
Query: 515 WSGDFTQGPQSAKTRFWKNVRYHMP 539
+ G + + FWK V+ +P
Sbjct: 1076TLLLWRPGSVTPSSDFWKEVQLALP 1150
>dbj|AK025099.1|AK025099 Homo sapiens cDNA: FLJ21446 fis, clone COL04458
Length = 1695
Score = 68.6 bits (166), Expect = 2e-09
Identities = 75/325 (23%), Positives = 145/325 (44%), Gaps = 11/325 (3%)
Frame = +2
Query: 226 PVIVSPA-NETMEVDLGSQIQLICN---VTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSV 281
P +SP+ ++ + LGS + L C V+G + +W + + P+ +YS+
Sbjct: 251 PDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQW----LKDGLPLGIGGHYSL 418
Query: 282 EN----PANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKH 337
AN + +VL ++ + Y FTC +N + +Q P ++
Sbjct: 419 HEYSWVKANLSEVLVSSVLGVNVTSTEVYG-AFTCSIQNI-SFSSFTLQRAGPTSHVAAV 592
Query: 338 MIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGE 397
+ + V L +++ + +Y +++++LWY+D+ + ++ +DGK YDAY+ Y
Sbjct: 593 LASLLVLLALLL--AALLYVKCRLNVLLWYQDA---YGEVEINDGKLYDAYVSY------ 739
Query: 398 GSTSDCD---IFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIIL 454
SDC FV +L LE++ GYKLF+ RD + + N+ + RRLI++L
Sbjct: 740 ---SDCPEDRKFVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVL 910
Query: 455 VRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIR 514
+W S E + L + I + + Q + +++ ++Q H +
Sbjct: 911 SDAFLSRAWCSHSFREGLCRLLELTRRPIFITF----EGQRRDPAHPALRLLRQ-HRHLV 1075
Query: 515 WSGDFTQGPQSAKTRFWKNVRYHMP 539
+ G + + FWK V+ +P
Sbjct: 1076TLLLWRPGSVTPSSDFWKEVQLALP 1150
>gb|BC003591.1|BC003591 Homo sapiens, single Ig IL-1R-related molecule, clone MGC:4338
IMAGE:2821373, mRNA, complete cds
Length = 1627
Score = 68.6 bits (166), Expect = 2e-09
Identities = 75/325 (23%), Positives = 145/325 (44%), Gaps = 11/325 (3%)
Frame = +1
Query: 226 PVIVSPA-NETMEVDLGSQIQLICN---VTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSV 281
P +SP+ ++ + LGS + L C V+G + +W + + P+ +YS+
Sbjct: 181 PDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQW----LKDGLPLGIGGHYSL 348
Query: 282 EN----PANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQKH 337
AN + +VL ++ + Y FTC +N + +Q P ++
Sbjct: 349 HEYSWVKANLSEVLVSSVLGVNVTSTEVYG-AFTCSIQNI-SFSSFTLQRAGPTSHVAAV 522
Query: 338 MIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVGE 397
+ + V L +++ + +Y +++++LWY+D+ + ++ +DGK YDAY+ Y
Sbjct: 523 LASLLVLLALLL--AALLYVKCRLNVLLWYQDA---YGEVEINDGKLYDAYVSY------ 669
Query: 398 GSTSDCD---IFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIIL 454
SDC FV +L LE++ GYKLF+ RD + + N+ + RRLI++L
Sbjct: 670 ---SDCPEDRKFVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRLIVVL 840
Query: 455 VRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIR 514
+W S E + L + I + + Q + +++ ++Q H +
Sbjct: 841 SDAFLSRAWCSHSFREGLCRLLELTRRPIFITF----EGQRRDPAHPALRLLRQ-HRHLV 1005
Query: 515 WSGDFTQGPQSAKTRFWKNVRYHMP 539
+ G + + FWK V+ +P
Sbjct: 1006TLLLWRPGSVTPSSDFWKEVQLALP 1080
>dbj|AB041747.1|AB041740S8 Gallus gallus st2 gene, exon 11
Length = 545
Score = 67.8 bits (164), Expect = 3e-09
Identities = 38/106 (35%), Positives = 59/106 (54%), Gaps = 13/106 (12%)
Frame = +3
Query: 380 SDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEV 439
+DGK YDAY++YP++ +T + FV++++P++LE +CGY L IYGRD Y GE +
Sbjct: 246 ADGKIYDAYVIYPRSHSTEATF-VEYFVYQIMPDILENKCGYTLCIYGRDTYPGEGKFQ- 419
Query: 440 INENVKKSRRLIIILV-------------RETSGFSWLGGSSEEQI 472
++ S L I L +E SW G SS++Q+
Sbjct: 420 ----IR*STALFIALEQVVFLDPQGQGGGKEVPWHSWAGCSSQQQL 545
>gb|AF380138.1|AF380138 Monkeypox virus strain Zaire-96-I-16, complete genome
Length = 196858
Score = 65.5 bits (158), Expect = 1e-08
Identities = 76/329 (23%), Positives = 136/329 (41%), Gaps = 15/329 (4%)
Frame = +2
Query: 1 MKVLLRLICFIALLISSLEADKCKEREEKII-LVSSANEIDVRPCP----LNPNEHKGTI 55
+ V+ I F + + + +C ++ + + NE + PCP L+ + I
Sbjct: 172412 LPVIFLPIFFYSPFVQTFNVPECIDKGQYFASFMELENEPVILPCPQINTLSSGYNILDI 172591
Query: 56 TWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVE 115
W K ++ +I L P + DSG Y C+ N +YC + ++ V
Sbjct: 172592 LW----EKRGADNDRIIQIDNGSNMLILNPTQ-SDSGIYICITTNETYCDMMSLNLTIVS 172756
Query: 116 -NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
+E N+ + + Q + G +VCP + F + N + W + +
Sbjct: 172757 VSESNIDLIS---YPQIVNERSTGEMVCPNINAFISSNVNADII-WSGHRR------LRN 172906
Query: 175 SGVKDR----LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS 230
+K R + + +V + G YTC Y Y+GK Y +TR+I+ + P P +
Sbjct: 172907 KRLKQRTPGIITIEDVRKNDAGYYTCVLEYIYMGKTYNVTRIIKLEVRDRIIP--PTMKL 173080
Query: 231 PANETMEVDLGSQIQLICNVTGQLSDI---AYWKWNGSVIDEDDPVLGEDYYSVENP--A 285
P E + +GS + + C V+ +L +W NG +E+D G+ SV N
Sbjct: 173081 P--EGVVTSIGSNLTITCRVSLRLPTTDADVFWISNGMYYEEEDED-GDGRISVANKIYM 173251
Query: 286 NKRRSTLITVLNISEIESRFYKHPFTCFA 314
+R + + LNI+ ++ FTC A
Sbjct: 173252 TDKRRVITSWLNINPVKEE-DATTFTCMA 173335
>dbj|AB029084.1|AB029084 Homo sapiens ST2V mRNA, complete cds
Length = 1680
Score = 65.5 bits (158), Expect = 1e-08
Identities = 41/179 (22%), Positives = 78/179 (42%)
Frame = +2
Query: 37 NEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYC 96
NE + CP + T+ WY + + T++ +R+ L F+PA+V DSG Y C
Sbjct: 284 NEALIVRCP-RQGKPSYTVDWYYSQTNKSIPTQERNRVFASGRLLKFLPAEVADSGIYTC 460
Query: 97 VVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELP 156
+VR+ ++ + + + + ++ + + CP ++ + N
Sbjct: 461 IVRSPTFNRTGYANVTIYKKQSDCNVPDYLMYSTVSGSEKNSKIYCPTIDLY----NWTA 628
Query: 157 KLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEF 215
L+W+K+C+ L + K L++ NV + G+YTC + G Y +T F
Sbjct: 629 PLEWFKNCQ--ALQGSRYRAHKSFLVIDNVMTEDAGDYTCKFIHNENGANYSVTATRSF 799
Score = 38.1 bits (87), Expect = 2.3
Identities = 32/111 (28%), Positives = 48/111 (42%), Gaps = 9/111 (8%)
Frame = +1
Query: 226 PVIVSPA-NETMEVDLGSQIQLICNVT----GQLSDIAYWKWNGSVIDEDDPVLGEDYYS 280
PVI +PA NE EV++G L C+ Q W+ NG+ I + GE
Sbjct: 1003 PVIGAPAQNEIKEVEIGKNANLTCSACFGKGTQFLAAVLWQLNGTKITD----FGEPRIQ 1170
Query: 281 VENPANKRRST----LITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQL 327
E N+ S L VL I++++ + C A N HG+ ++L
Sbjct: 1171 QEEGQNQSFSNGLACLDMVLRIADVKEEDLLLQYDCLALNLHGLRRHTVRL 1323
>emb|X75603.1|PWFGFR3 P.waltlii mRNA for fibroblast growth factor receptor 3
Length = 2763
Score = 62.4 bits (150), Expect = 1e-07
Identities = 76/348 (21%), Positives = 133/348 (37%), Gaps = 43/348 (12%)
Frame = +1
Query: 54 TITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 113
++ W+KD +S + + H ++ L + +DSG Y C R SS LR ++ +
Sbjct: 193 SVVWFKDG----ISVDPPTWSHTGQKLLKIINVSYDDSGVYSCKARQSSEVLR-NVTVRV 357
Query: 114 VEN----------EPNLCYNAQAIFKQK--------LPVAGDGGLVCPYMEFFKNENNEL 155
++ E + NA + + +P A CP
Sbjct: 358 TDSPSSGDDEDDDEESESANAPKFTRPEWMEKKLLAVPAANTVRFRCPAA------GKPT 519
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTYLGKQYPIT 210
P + W K+ K ++ G+K R L++ +V RGNYTC + +Y
Sbjct: 520 PSITWLKNGKEFKGEH-RIGGIKLRHQQWSLVMESVVPSDRGNYTC-----VVANKYGTI 681
Query: 211 RVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYW----KWNGSV 266
R + + E P RP++ + V +GS ++ C V W + NGS
Sbjct: 682 RETYTLDVLERTPHRPILQAGFRSNKTVVVGSDVEFHCKVYSDAQPHIQWLKHVEVNGSK 861
Query: 267 IDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKH-------PFTCFAKNTHG 319
D G Y +V A S E+E +F ++ +TC A N+ G
Sbjct: 862 FGPD----GNPYVTVLKTAGVNTSD-------KELEIQFLRNVTFEDAGEYTCLAGNSIG 1008
Query: 320 ID--AAYIQLIYPV-------TNFQKHMIGICVTLTVIIVCSVFIYKI 358
+A++ ++ P T+ CV + +++V +F YK+
Sbjct: 1009YSHHSAWLTVLPPAEPVPDVDTSVSILAAAGCVAVVILVVIIIFTYKM 1152
>gb|BC010806.1|BC010806 Mus musculus, Similar to single Ig IL-1R-related protein, clone
MGC:18899 IMAGE:4240425, mRNA, complete cds
Length = 1568
Score = 62.0 bits (149), Expect = 1e-07
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 5/208 (2%)
Frame = +3
Query: 337 HMIGICVTLTVIIVCSV--FIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKT 394
H+ + +L V++V + +Y +++++LWY+D+ + ++ +DGK YDAY+ Y
Sbjct: 468 HVAAVLASLLVLVVLLLVALLYVKCRLNMLLWYQDT---YGEVEMNDGKLYDAYVSY--- 629
Query: 395 VGEGSTSDCD---IFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLI 451
SDC FV +L LE++ GYKLF+ RD + + N+ + RRLI
Sbjct: 630 ------SDCPEDRKFVNFILKPQLERRRGYKLFLEDRDLLPRAEPSADLLVNLSRCRRLI 791
Query: 452 IILVRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHG 511
++L W S E + L + I + + Q E + +++ ++Q H
Sbjct: 792 VVLSDAFLSRPWCSQSFREGLCRLLELTRRPIFITF----EGQRREPIHPALRLLRQ-HR 956
Query: 512 AIRWSGDFTQGPQSAKTRFWKNVRYHMP 539
+ + G + + FWK ++ +P
Sbjct: 957 HLVTLVLWKPGSVTPSSDFWKELQLALP 1040
>gb|AF012825.1|AF012825 Ectromelia virus envelope glycoprotein C1R (C1R), C2R (C2R), C3R
(C3R), IFN-gamma binding protein C4R (C4R), C5R (C5R),
protein kinase C6R (C6R), serpin C7R (C7R), C8R (C8R),
IL-1 beta binding protein C9R (C9R), C10L (C10L), C11R
(C11R), IFN-alpha/beta>
Length = 32318
Score = 61.6 bits (148), Expect = 2e-07
Identities = 66/265 (24%), Positives = 112/265 (41%), Gaps = 7/265 (2%)
Frame = +3
Query: 90 DSGHYYCVVRNSSYCLRIKISAKFV-ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFF 148
DSG Y C+ +N +YC + ++ V + E N+ + + Q + G +VCP + F
Sbjct: 8184 DSGIYICITKNETYCDMMSLNLTIVTDTESNIDLIS---YPQIVNERSTGEMVCPNINAF 8354
Query: 149 KNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYP 208
N ++ ++ P L + + + +V + G YTC YTY K Y
Sbjct: 8355 IARNKDVDVDVIWRG-HPRLRNKRLTQRPIGIITIEDVRKNDAGYYTCVLKYTYRDKTYE 8531
Query: 209 ITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDI---AYWKWNGS 265
+TR+++ + P P + P + LGS + + C V+ + I +W N
Sbjct: 8532 VTRIVKLEVRDRIIP--PTMQLPV--VVMTSLGSNLTIACRVSLRPPTIDADVFWISNNE 8699
Query: 266 VIDEDDPVLGEDYYSVEN---PANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDA 322
+EDD D SV N +KRR + + LNI+ ++ FTC A H +
Sbjct: 8700 YYEEDDE--DSDGRSVTNRIFTIDKRR-VITSRLNINPVKED-DATTFTCMAFTVHNSIS 8867
Query: 323 AYIQLIYPVTNFQKHMIGICVTLTV 347
+ + + H+I LTV
Sbjct: 8868 KTVTI--SIK*LHYHLISFYFGLTV 8936
Score = 36.2 bits (82), Expect = 8.8
Identities = 42/220 (19%), Positives = 85/220 (38%), Gaps = 15/220 (6%)
Frame = +2
Query: 147 FFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASY--TYLG 204
+ K+ NN + WYK+ + L++D +S LI+ N + G Y C+ Y +
Sbjct: 12452 YAKHYNN----ITWYKNNQELIIDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIK 12619
Query: 205 KQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNV--TGQLSDIAYWKW 262
++R + +I+ P + V +G + C T L D W
Sbjct: 12620 NDIVVSRCKILTVIPSQDHRFKLILDP---KINVTIGEPANITCTAVSTSLLVDDVLIDW 12790
Query: 263 NGSVIDEDDPVLGEDY--YSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKN---- 316
+ ++G D+ YS+ + + N++E + + +TC N
Sbjct: 12791 E----NPSGWIIGLDFGVYSILTSSGGITEATLYFENVTE---EYIGNTYTCRGHNYYFD 12949
Query: 317 -----THGIDAAYIQLIYPVTNFQKHMIGICVTLTVIIVC 351
T ++ + +Y + N+ +I I + + I++C
Sbjct: 12950 KTLTTTVVLE*IHNAFLYTLLNYY*IIIIIIIIINYIVLC 13069
>emb|AJ277110.1|EVI277110 Ectromelia virus IL1RB for Interleukin 1 beta receptor
Length = 987
Score = 61.2 bits (147), Expect = 3e-07
Identities = 61/236 (25%), Positives = 102/236 (42%), Gaps = 7/236 (2%)
Frame = +1
Query: 90 DSGHYYCVVRNSSYCLRIKISAKFV-ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFF 148
DSG Y C+ +N +YC + ++ V + E N+ + + Q + G +VCP + F
Sbjct: 277 DSGIYICITKNETYCDMMSLNLTIVTDTESNIDLIS---YPQIVNERSTGEMVCPNINAF 447
Query: 149 KNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYP 208
N ++ ++ P L + + + +V + G YTC YTY K Y
Sbjct: 448 IARNKDVDVDVIWRG-HPRLRNKRLTQRPIGIITIEDVRKNDAGYYTCVLKYTYRDKTYE 624
Query: 209 ITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDI---AYWKWNGS 265
+TR+++ + P P + P + LGS + + C V+ + I +W N
Sbjct: 625 VTRIVKLEVRDRIIP--PTMQLPV--VVMTSLGSNLTIACRVSLRPPTIDADVFWISNNE 792
Query: 266 VIDEDDPVLGEDYYSVEN---PANKRRSTLITVLNISEIESRFYKHPFTCFAKNTH 318
+EDD D SV N +KRR + + LNI+ ++ FTC A H
Sbjct: 793 YYEEDDE--DSDGRSVTNRIFTIDKRR-VITSRLNINPVKED-DATTFTCMAFTVH 948
>gb|M35027.1|VACCG Vaccinia virus, complete genome
Length = 191737
Score = 60.8 bits (146), Expect = 3e-07
Identities = 76/329 (23%), Positives = 132/329 (40%), Gaps = 15/329 (4%)
Frame = +2
Query: 1 MKVLLRLICFIALLISSLEADKCKEREEKII-LVSSANEIDVRPCP----LNPNEHKGTI 55
+ V+ I F + + + A +C ++ + NE + PCP L+ + I
Sbjct: 174173 LPVIFLPIFFYSSFVQTFNASECIDKG*YFASFMELENEPVILPCPQINTLSSGYNILDI 174352
Query: 56 TWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVE 115
W K ++ I L P + DSG Y C+ N +YC + ++ V
Sbjct: 174353 LW----EKRGADNDRIIPIDNGSNMLILNPTQ-SDSGIYICITTNETYCDMMSLNLTIVS 174517
Query: 116 -NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
+E N+ + + + Q + G +VCP + F N + W + +
Sbjct: 174518 VSESNIDFIS---YPQIVNERSTGEMVCPNINAFIASNVNADII-WSGHRR------LRN 174667
Query: 175 SGVKDR----LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS 230
+K R + + +V + G YTC Y Y GK Y +TR+++ +K P +
Sbjct: 174668 KRLKQRTPGIITIEDVRKNDAGYYTCVLEYIYGGKTYNVTRIVKLEV--RDKIIHPTMQL 174841
Query: 231 PANETMEVDLGSQIQLICNVT---GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENP--A 285
P E + +GS + + C V+ +W NG +EDD G+ SV N
Sbjct: 174842 P--EGVVTSIGSNLTIACRVSLRPPTTDADVFWISNGMYYEEDDGD-GDGRISVANKIYM 175012
Query: 286 NKRRSTLITVLNISEIESRFYKHPFTCFA 314
+R + + LNI+ ++ FTC A
Sbjct: 175013 TDKRRVITSRLNINPVKEE-DATTFTCMA 175096
Score = 36.6 bits (83), Expect = 6.7
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 147 FFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASY 200
+ K+ NN + WYKD K + +D+I +S LI+ N + G Y C+ Y
Sbjct: 178676 YAKHYNN----ITWYKDNKEINIDDIKYSQTGKELIIHNPELEDSGRYDCYVHY 178825
>gb|U94848.1|U94848 Vaccinia virus strain Ankara, complete genomic sequence
Length = 177923
Score = 60.1 bits (144), Expect = 6e-07
Identities = 74/329 (22%), Positives = 131/329 (39%), Gaps = 15/329 (4%)
Frame = +3
Query: 1 MKVLLRLICFIALLISSLEADKCKEREEKII-LVSSANEIDVRPCP----LNPNEHKGTI 55
+ V+ I F + + + A +C ++ + + NE + PCP L+ + I
Sbjct: 162030 LPVIFLSIFFYSSFVQTFNAPECIDKGQYFASFMELENEPVILPCPQINTLSSGYNILDI 162209
Query: 56 TWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVE 115
W K ++ I L P + DSG Y C+ N +YC + ++ V
Sbjct: 162210 LW----EKRGADNDRIIPIDNGSNMLILNPTQ-SDSGIYICITTNETYCDMMSLNLTIVS 162374
Query: 116 -NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
+E N+ + + Q + G +VCP + F N + W + +
Sbjct: 162375 VSESNIDLIS---YPQIVNERSTGEMVCPNINAFIASNVNADII-WSGHRR------LRN 162524
Query: 175 SGVKDR----LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS 230
+K R + + +V + G YTC Y Y GK Y +TR+++ ++ P+
Sbjct: 162525 KRLKQRTPGIITIEDVRKNDAGYYTCVLEYIYGGKTYNVTRIVKLEVRDKIIPS----TM 162692
Query: 231 PANETMEVDLGSQIQLICNVT---GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENP--A 285
E + +GS + + C V+ +W NG +EDD G+ SV N
Sbjct: 162693 QLPEGVVTSIGSNLTIACRVSLRPPTTDADVFWISNGMYYEEDDGD-GDGRISVANKIYM 162869
Query: 286 NKRRSTLITVLNISEIESRFYKHPFTCFA 314
+R + + LNI+ ++ FTC A
Sbjct: 162870 TDKRRVITSRLNINPVKEE-DATTFTCMA 162953
Score = 37.7 bits (86), Expect = 3.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 147 FFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASY 200
+ K+ NN + WYKD K + +D+I +S +LI+ N + G Y C+ Y
Sbjct: 166530 YAKHYNN----ITWYKDNKEINIDDIKYSQTGKKLIIHNPELEDSGRYNCYVHY 166679
>gb|AF239957.1|AF239957 Mus musculus single Ig IL-1R-related protein mRNA, complete cds
Length = 1421
Score = 59.3 bits (142), Expect = 1e-06
Identities = 51/208 (24%), Positives = 97/208 (46%), Gaps = 5/208 (2%)
Frame = +1
Query: 337 HMIGICVTLTVIIVCSV--FIYKIFKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKT 394
H+ + +L V++V + +Y +++++LWY+D+ + ++ +DGK YDAY+ Y
Sbjct: 457 HVAAVLASLLVLVVLLLVALLYVKCRLNMLLWYQDT---YGEVEMNDGKLYDAYVSY--- 618
Query: 395 VGEGSTSDCD---IFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLI 451
SDC FV +L LE++ GYK F+ RD + + N+ + RRLI
Sbjct: 619 ------SDCPEDRKFVNFILKPQLERRRGYKPFLEDRDLLPRAEPSADLLVNLSRCRRLI 780
Query: 452 IILVRETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHG 511
++L W S E + L + I + + Q E + +++ ++Q H
Sbjct: 781 VVLSDAFLSRPWCSQSFREGLCRLLELTRRPIFITF----EGQRREPIHPALRLLRQ-HR 945
Query: 512 AIRWSGDFTQGPQSAKTRFWKNVRYHMP 539
+ + G + + FWK ++ +P
Sbjct: 946 HLVTLVLWKPGSVTPSSDFWKELQLALP 1029
>emb|Y15035.1|CVY15035 Cowpox virus strain GRI-90 DNA (49 kb fragment)
Length = 49649
Score = 58.9 bits (141), Expect = 1e-06
Identities = 74/329 (22%), Positives = 131/329 (39%), Gaps = 15/329 (4%)
Frame = +2
Query: 1 MKVLLRLICFIALLISSLEADKCKEREEKII-LVSSANEIDVRPCP----LNPNEHKGTI 55
+ V+ I F + + + A +C ++ + + NE + PCP L+ + I
Sbjct: 19439 LPVIFLPIFFYSSFVQTFNAPECIDKGQYFASFMELENEPVILPCPQINTLSSGYNILDI 19618
Query: 56 TWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVE 115
W K ++ I L P + DSG Y C+ N +YC + ++ V
Sbjct: 19619 LW----EKRGADNDRIIPIDNGSNMLILNPTQ-SDSGIYICITTNETYCDMMSLNLTIVS 19783
Query: 116 -NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
+E N+ + + Q + G +VCP + F N + W + +
Sbjct: 19784 VSESNIDLIS---YPQIVNERSTGEMVCPNINAFIASNVNADII-WSGHRR------LRN 19933
Query: 175 SGVKDR----LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS 230
+K R + + +V + G YTC Y Y GK Y +TR+++ ++ P +
Sbjct: 19934 KRLKQRTPGIITIEDVRKNDAGYYTCVLEYIYRGKTYNVTRIVKLEV--RDRIIHPTMQL 20107
Query: 231 PANETMEVDLGSQIQLICNVT---GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENP--A 285
P E + +GS + + C V+ +W NG +EDD G+ SV N
Sbjct: 20108 P--EGVVTSIGSNLTIACRVSLRPPTTDADVFWISNGMYYEEDDGD-GDGRISVANKIYT 20278
Query: 286 NKRRSTLITVLNISEIESRFYKHPFTCFA 314
+R + + L I+ ++ FTC A
Sbjct: 20279 TDKRRVITSRLKINPVKEE-DATTFTCMA 20362
Score = 37.4 bits (85), Expect = 4.0
Identities = 36/174 (20%), Positives = 65/174 (36%), Gaps = 4/174 (2%)
Frame = +3
Query: 147 FFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASY--TYLG 204
+ K+ NN + WYKD K + +D+I +S LI+ N + G Y C+ Y +
Sbjct: 23934 YAKHYNN----ITWYKDNKEINIDDIKYSQTGKELIIHNPELEDSGRYDCYVHYDDVRIK 24101
Query: 205 KQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNV--TGQLSDIAYWKW 262
++R + +I+ P + V +G + C T L D +W
Sbjct: 24102 NDIVVSRCKILTVIPSQDHRFKLILDP---KINVTIGEPANITCTAVSTSLLIDDVLIEW 24272
Query: 263 NGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKN 316
+ ++G D + V + R L + + + +TC N
Sbjct: 24273 E----NPSGWIIGLD-FGVYSILTSRGGITEATLYFENVTEEYIGNTYTCRGHN 24419
>ref|XM_053531.3| Homo sapiens fibulin 6 (FIBL-6), mRNA
Length = 18206
Score = 58.5 bits (140), Expect = 2e-06
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 2/219 (0%)
Frame = +2
Query: 54 TITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 113
+ITW+KD PVS + RI L + +ED+G Y CVVRN++ R KI
Sbjct: 7478 SITWFKDG--WPVSLSNSVRILSGGRMLRLMQTTMEDAGQYTCVVRNAAGEER-KIFGLS 7648
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIH 173
V P++ + K+ L C + N +P++ W+KD +PL D H
Sbjct: 7649 VLVPPHI-VGENTLEDVKVKEKQSVTLTC------EVTGNPVPEITWHKDGQPLQEDEAH 7807
Query: 174 FSGVKDRLI-VMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA 232
R + + NV H G YTC AS + G + + F++ PT + S
Sbjct: 7808 HIISGGRFLQITNVQVPHTGRYTCLAS-SPAGHKSRSFSLNVFVS-----PTIAGVGSDG 7969
Query: 233 N-ETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDED 270
N E + V L S L+C W +G+ ++ +
Sbjct: 7970 NPEDVTVILNSPTSLVCEAYSYPPATITWFKDGTPLESN 8086
Score = 55.5 bits (132), Expect = 1e-05
Identities = 51/206 (24%), Positives = 88/206 (41%), Gaps = 7/206 (3%)
Frame = +2
Query: 54 TITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSS------YCLRI 107
T+TWYKD P+++ I L AKVED+G Y CV N + Y +R+
Sbjct: 8651 TLTWYKDGH--PLTSSDKVLILPGGRVLQIPRAKVEDAGRYTCVAVNEAGEDSLQYDVRV 8824
Query: 108 KISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPL 167
+ P + A + +++ V + + + + + P+ W KD +PL
Sbjct: 8825 LV--------PPIIKGANSDLPEEVTVLVNKSALIECL----SSGSPAPRNSWQKDGQPL 8968
Query: 168 LLDNIHFSGVKDRLI-VMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRP 226
L D+ H R++ ++N G Y C A T + ++ L + P P
Sbjct: 8969 LEDDHHKFLSNGRILQILNTQITDIGRYVCVAENTAGSAK-------KYFNLNVHVP--P 9121
Query: 227 VIVSPANETMEVDLGSQIQLICNVTG 252
++ P +E + V + + I L C V+G
Sbjct: 9122 SVIGPKSENLTVVVNNFISLTCEVSG 9199
Score = 54.7 bits (130), Expect = 2e-05
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 4/221 (1%)
Frame = +3
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVP-AKVEDSGHYYCVVRNSSYCLRIKISAKF 113
ITWYKD +S+ QA ++ K + +P A+V DS Y C V N +
Sbjct: 4965 ITWYKDGQPI-MSSSQA--LYIDKGQYLHIPRAQVSDSATYTCHVANVAGTAEKSFHVD- 5132
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLL-DNI 172
V P + N +++ +A L C K N P L W KD P+ DNI
Sbjct: 5133 VYVPPMIEGNLATPLNKQVVIAHSLTLEC------KAAGNPSPILTWLKDGVPVKANDNI 5294
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA 232
+L +M+ E RG Y C A T + + I ++ + P +
Sbjct: 5295 RIEAGGKKLEIMSAQEIDRGQYICVA--TSVAGEKEIKYEVDVLV--------PPAIEGG 5444
Query: 233 NETME--VDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDD 271
+ET V + + ++L C+VTG W +G +IDE D
Sbjct: 5445 DETSYFIVMVNNLLELDCHVTGSPPPTIMWLKDGQLIDERD 5567
Score = 43.5 bits (101), Expect = 0.055
Identities = 41/153 (26%), Positives = 67/153 (42%), Gaps = 7/153 (4%)
Frame = +2
Query: 54 TITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCL----RIKI 109
TITW+KD TP+ + + RI L + A+ +++G Y CV N + + +K+
Sbjct: 8045 TITWFKDG--TPLESNRNIRILPGGRTLQILNAQEDNAGRYSCVATNEAGEMIKHYEVKV 8218
Query: 110 SAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELP--KLQWYKDCKPL 167
+ N+ +L + + K+ V L C E +P L WYKD +PL
Sbjct: 8219 YIPPIINKGDLWGPGLSPKEVKIKVNNTLTLEC--------EAYAIPSASLSWYKDGQPL 8374
Query: 168 LL-DNIHFSGVKDRLIVMNVAEKHRGNYTCHAS 199
D+++ + L + G YTC AS
Sbjct: 8375 KSDDHVNIAANGHTLQIKEAQISDTGRYTCVAS 8473
Score = 42.7 bits (99), Expect = 0.094
Identities = 33/111 (29%), Positives = 50/111 (44%), Gaps = 1/111 (0%)
Frame = +3
Query: 54 TITWYKDDSKTPVSTEQAS-RIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 112
+ITW KDD PV+T Q + +I L +ED+G Y CV N++ + I
Sbjct: 5799 SITWLKDDQ--PVNTAQGNLKIQSSGRVLQIAKTLLEDAGRYTCVATNAAGETQQHIQLH 5972
Query: 113 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKD 163
+EP +A + + + V+ L C K N +P + WYKD
Sbjct: 5973 V--HEPPSLEDAGKMLNETVLVSNPVQLEC------KAAGNPVPVITWYKD 6101
Score = 41.2 bits (95), Expect = 0.27
Identities = 72/305 (23%), Positives = 115/305 (37%), Gaps = 14/305 (4%)
Frame = +2
Query: 54 TITWYKDDSKTPVST-EQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSS------YCLR 106
++TW KD S PVS+ ++ L A++ D+G Y CV N++ LR
Sbjct: 6353 SLTWLKDGS--PVSSFSNGLQVLSGGRILALTSAQISDTGRYTCVAVNAAGEKQRDIDLR 6526
Query: 107 IKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKP 166
+ + + E N+ + Q + + + P P L W KD P
Sbjct: 6527 VYVPPNIMGEEQNV----SVLISQAVELLCQSDAIPP------------PTLTWLKDGHP 6658
Query: 167 LL-LDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTR 225
LL + S + L + + + G YTC A+ GK V ++
Sbjct: 6659 LLKKPGLSISENRSVLKIEDAQVQDTGRYTCEAT-NVAGKTEKNYNVNIWV--------- 6808
Query: 226 PVIVSPANETMEVDL--GSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVEN 283
P + ++E ++ + G+ I L+C +G WK GS PVL + V
Sbjct: 6809 PPNIGGSDELTQLTVIEGNLISLLCESSGIPPPNLIWKKKGS------PVLTDSMGRVRI 6970
Query: 284 PANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG-IDAAYIQLIY---PVTNFQKHMI 339
+ R+ L IS I + ++C A N G Y +Y +TN H
Sbjct: 6971 LSGGRQ------LQIS-IAEKSDAALYSCVASNVAGTAKKEYNLQVYIRPTITNSGSHPT 7129
Query: 340 GICVT 344
I VT
Sbjct: 7130 EIIVT 7144
Score = 40.8 bits (94), Expect = 0.36
Identities = 54/221 (24%), Positives = 81/221 (36%), Gaps = 10/221 (4%)
Frame = +2
Query: 54 TITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSS------YCLRI 107
TI W K+ + S RI KL ++ DSG+Y C+ N Y L I
Sbjct: 9773 TIAWLKNHKRIENSDSLEVRILSGGSKLQIARSQHSDSGNYTCIASNMEGKAQKYYFLSI 9952
Query: 108 KISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENN-ELPKLQWYKDCKP 166
++ P A+ + + + LVC N N P +QW KD KP
Sbjct: 9953 QV--------PPSVAGAEIPSDVSVLLGENVELVC-------NANGIPTPLIQWLKDGKP 10087
Query: 167 LL---LDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKP 223
+ + I S L + G YTC A+ G++ I + ++T P
Sbjct: 10088IASGETERIRVSANGSTLNIYGALTSDTGKYTCVAT-NPAGEEDRIFNLNVYVT-----P 10249
Query: 224 TRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNG 264
T A + M + + + I + C TG W NG
Sbjct: 10250TIRGNKDEAEKLMTL-VDTSINIECRATGTPPPQINWLKNG 10369
Score = 40.0 bits (92), Expect = 0.61
Identities = 56/251 (22%), Positives = 92/251 (36%), Gaps = 12/251 (4%)
Frame = +2
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRN----SSYCLRIKIS 110
ITW+KD S Q + + P D+GHY C+ N SS ++ +
Sbjct: 12557 ITWHKDGRAIVESIRQRVLSSGSLQIAFVQPG---DAGHYTCMAANVAGSSSTSTKLTVH 12727
Query: 111 A----KFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKP 166
+ E + N+QAI LP DG P + W KD
Sbjct: 12728 VPPRIRSTEGHYTVNENSQAI----LPCVADG--------------IPTPAINWKKD--N 12847
Query: 167 LLLDNI---HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKP 223
+LL N+ + + LI+ NV + G YTC A+ + ++ + + P
Sbjct: 12848 VLLANLLGKYTAEPYGELILENVVLEDSGFYTCVANNAAGEDTHTVSLTVHVLPTFTELP 13027
Query: 224 TRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDED-DPVLGEDYYSVE 282
+ ++ G Q++L C TG W +N ++I D V G +E
Sbjct: 13028 ----------GDVSLNKGEQLRLSCKATGIPLPKLTWTFNNNIIPAHFDSVNGHSELVIE 13177
Query: 283 NPANKRRSTLI 293
+ + T +
Sbjct: 13178 RVSKEDSGTYV 13210
>emb|Z81144.1|HSU129B7 Human DNA sequence from cosmid U129B7, between markers DXS366 and DXS87
on chromosome X contains EST
Length = 22388
Score = 58.2 bits (139), Expect = 2e-06
Identities = 26/69 (37%), Positives = 40/69 (57%)
Frame = +2
Query: 94 YYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENN 153
+ C RNS+YC+++ +S ENE LCYN++ + +K V + CP M+ FK +
Sbjct: 11870 FLCSYRNSTYCMKVSMSLTVAENESGLCYNSRIRYLEKSEVTKRKEISCPDMDDFKKSDQ 12049
Query: 154 ELPKLQWYK 162
E P + WYK
Sbjct: 12050 E-PDVVWYK 12073
>emb|X56121.1|VVB15RG Vaccinia virus B15R gene for 36.5 kDa protein
Length = 1200
Score = 58.2 bits (139), Expect = 2e-06
Identities = 73/329 (22%), Positives = 130/329 (39%), Gaps = 15/329 (4%)
Frame = +1
Query: 1 MKVLLRLICFIALLISSLEADKCKEREEKII-LVSSANEIDVRPCP----LNPNEHKGTI 55
+ V+ I F + + + A +C ++ + + NE + PCP L+ + I
Sbjct: 130 LPVIFLSIFFYSSFVQTFNAPECIDKGQYFASFMELENEPVILPCPQINTLSSGYNILDI 309
Query: 56 TWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVE 115
W K ++ I L P + DSG Y C+ N +YC + ++ V
Sbjct: 310 LW----EKRGADNDRIIPIDNGSNMLILNPTQ-SDSGIYICITTNETYCDMMSLNLTIVS 474
Query: 116 -NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
+E N+ + + Q + G +VCP + F N + W + +
Sbjct: 475 VSESNIDLIS---YPQIVNERSTGEMVCPNINAFIASNVNADII-WSGHRR------LRN 624
Query: 175 SGVKDR----LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS 230
+K R + + +V + G YTC Y Y GK Y +TR+++ ++ P+
Sbjct: 625 KRLKQRTPGIITIEDVRKNDAGYYTCVLEYIYGGKTYNVTRIVKLEVRDKIIPS----TM 792
Query: 231 PANETMEVDLGSQIQLICNVT---GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENP--A 285
+ + +GS + + C V+ +W NG +EDD G SV N
Sbjct: 793 QLPDGIVTSIGSNLTIACRVSLRPPTTDADVFWISNGMYYEEDDGD-GNGRISVANKIYM 969
Query: 286 NKRRSTLITVLNISEIESRFYKHPFTCFA 314
+R + + LNI+ ++ FTC A
Sbjct: 970 TDKRRVITSRLNINPVKEE-DATTFTCMA 1053
>dbj|D01018.1|VACB15RW Vaccinia virus DNA for B15R protein, complete cds
Length = 1200
Score = 58.2 bits (139), Expect = 2e-06
Identities = 73/329 (22%), Positives = 130/329 (39%), Gaps = 15/329 (4%)
Frame = +1
Query: 1 MKVLLRLICFIALLISSLEADKCKEREEKII-LVSSANEIDVRPCP----LNPNEHKGTI 55
+ V+ I F + + + A +C ++ + + NE + PCP L+ + I
Sbjct: 130 LPVIFLSIFFYSSFVQTFNAPECIDKGQYFASFMELENEPVILPCPQINTLSSGYNILDI 309
Query: 56 TWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVE 115
W K ++ I L P + DSG Y C+ N +YC + ++ V
Sbjct: 310 LW----EKRGADNDRIIPIDNGSNMLILNPTQ-SDSGIYICITTNETYCDMMSLNLTIVS 474
Query: 116 -NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
+E N+ + + Q + G +VCP + F N + W + +
Sbjct: 475 VSESNIDLIS---YPQIVNERSTGEMVCPNINAFIASNVNADII-WSGHRR------LRN 624
Query: 175 SGVKDR----LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS 230
+K R + + +V + G YTC Y Y GK Y +TR+++ ++ P+
Sbjct: 625 KRLKQRTPGIITIEDVRKNDAGYYTCVLEYIYGGKTYNVTRIVKLEVRDKIIPS----TM 792
Query: 231 PANETMEVDLGSQIQLICNVT---GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENP--A 285
+ + +GS + + C V+ +W NG +EDD G SV N
Sbjct: 793 QLPDGIVTSIGSNLTIACRVSLRPPTTDADVFWISNGMYYEEDDGD-GNGRISVANKIYM 969
Query: 286 NKRRSTLITVLNISEIESRFYKHPFTCFA 314
+R + + LNI+ ++ FTC A
Sbjct: 970 TDKRRVITSRLNINPVKEE-DATTFTCMA 1053
>dbj|D11079.1|VACRHF Vaccinia virus genomic DNA, 42kbp from near the right ITR
Length = 42090
Score = 58.2 bits (139), Expect = 2e-06
Identities = 73/329 (22%), Positives = 130/329 (39%), Gaps = 15/329 (4%)
Frame = +3
Query: 1 MKVLLRLICFIALLISSLEADKCKEREEKII-LVSSANEIDVRPCP----LNPNEHKGTI 55
+ V+ I F + + + A +C ++ + + NE + PCP L+ + I
Sbjct: 33111 LPVIFLSIFFYSSFVQTFNAPECIDKGQYFASFMELENEPVILPCPQINTLSSGYNILDI 33290
Query: 56 TWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVE 115
W K ++ I L P + DSG Y C+ N +YC + ++ V
Sbjct: 33291 LW----EKRGADNDRIIPIDNGSNMLILNPTQ-SDSGIYICITTNETYCDMMSLNLTIVS 33455
Query: 116 -NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
+E N+ + + Q + G +VCP + F N + W + +
Sbjct: 33456 VSESNIDLIS---YPQIVNERSTGEMVCPNINAFIASNVNADII-WSGHRR------LRN 33605
Query: 175 SGVKDR----LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS 230
+K R + + +V + G YTC Y Y GK Y +TR+++ ++ P+
Sbjct: 33606 KRLKQRTPGIITIEDVRKNDAGYYTCVLEYIYGGKTYNVTRIVKLEVRDKIIPS----TM 33773
Query: 231 PANETMEVDLGSQIQLICNVT---GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENP--A 285
+ + +GS + + C V+ +W NG +EDD G SV N
Sbjct: 33774 QLPDGIVTSIGSNLTIACRVSLRPPTTDADVFWISNGMYYEEDDGD-GNGRISVANKIYM 33950
Query: 286 NKRRSTLITVLNISEIESRFYKHPFTCFA 314
+R + + LNI+ ++ FTC A
Sbjct: 33951 TDKRRVITSRLNINPVKEE-DATTFTCMA 34034
Score = 36.6 bits (83), Expect = 6.7
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 147 FFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASY 200
+ K+ NN + WYKD K + +D+I +S LI+ N + G Y C+ Y
Sbjct: 37611 YAKHYNN----ITWYKDNKEINIDDIKYSQTGKELIIHNPELEDSGRYDCYVHY 37760
>gb|AF095689.1|AF095689 Vaccinia virus (strain Tian Tan) complete genome
Length = 189274
Score = 57.8 bits (138), Expect = 3e-06
Identities = 73/331 (22%), Positives = 130/331 (39%), Gaps = 17/331 (5%)
Frame = +1
Query: 1 MKVLLRLICFIALLISSLEADKCKEREEKII-LVSSANEIDVRPCP----LNPNEHKGTI 55
+ V+ I F + + + A +C ++ + + NE + PCP L+ + I
Sbjct: 174823 LPVIFLPIFFYSSFVQTFNASECIDKGQYFASFMELENEPVILPCPQINTLSSGYNILDI 175002
Query: 56 TWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV- 114
W K ++ I L P + DSG Y C+ N +YC + ++ V
Sbjct: 175003 LW----EKRGADNDRIIPIDNGSNMLILNPTQ-SDSGIYICITTNETYCDMMSLNLTIVS 175167
Query: 115 --ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI 172
E+ +L Q + ++ G +VCP + F N + W + +
Sbjct: 175168 VLESNIDLISYPQIVNERST-----GEMVCPNINAFIASNVNADII-WSGHRR------L 175311
Query: 173 HFSGVKDR----LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI 228
+K R + + +V + G YTC Y Y GK Y +TR+++ ++ P+
Sbjct: 175312 RNKRLKQRTPGIITIEDVRKNDAGYYTCVLEYIYRGKTYNVTRIVKLEVRDKIIPS---- 175479
Query: 229 VSPANETMEVDLGSQIQLICNVT---GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENP- 284
+ + +GS + + C V+ +W NG +EDD G SV N
Sbjct: 175480 TMQLPDGIVTSIGSNLTIACRVSLRPPTTDADVFWISNGMYYEEDDGD-GNGRISVANKI 175656
Query: 285 -ANKRRSTLITVLNISEIESRFYKHPFTCFA 314
+R + + LNI+ ++ FTC A
Sbjct: 175657 YMTDKRRVITSRLNINPVKEE-DATTFTCMA 175746
Score = 36.6 bits (83), Expect = 6.7
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 147 FFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASY 200
+ K+ NN + WYKD K + +D+I +S LI+ N + G Y C+ Y
Sbjct: 179326 YAKHYNN----ITWYKDNKEINIDDIKYSQTGKELIIHNPELEDSGRYDCYVHY 179475
>gb|M95202.1|PXRIL1XX Poxvirus interleukin-1 binding protein (IL1) gene, complete cds
Length = 1102
Score = 57.4 bits (137), Expect = 4e-06
Identities = 75/324 (23%), Positives = 128/324 (39%), Gaps = 12/324 (3%)
Frame = +3
Query: 3 VLLRLICFIALLISSLEADKCKEREEKII-LVSSANEIDVRPCPLNPNEHKG----TITW 57
V+ I F + + + A +C ++ + + NE + PCP G I W
Sbjct: 72 VIFLPIFFYSSFVQAFNAPECIDKGQYFASFMELENEPVILPCPQINTISSGYNILDILW 251
Query: 58 YKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVE-N 116
K ++ I L P + DSG Y C+ +N +YC + ++ V +
Sbjct: 252 ----EKRGADNDRIIPIDNGSNMLILNPTQ-SDSGIYICITKNETYCDMMSLNLTIVSVS 416
Query: 117 EPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSG 176
E N+ + + Q + G +VCP + F N + W + L N
Sbjct: 417 ESNIDLIS---YTQIVNERTTGEMVCPNINAFIASNVNADII-WSGHRR---LRNKRLRQ 575
Query: 177 VKDRLIVM-NVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANET 235
+I + +V + G YTC YTY K Y +TR+++ + P P + P +
Sbjct: 576 RTPGIITIEDVRKNDAGYYTCVLKYTYGDKTYDVTRIVKLEVRDRMIP--PTMQLP--DG 743
Query: 236 MEVDLGSQIQLICNVT---GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENP--ANKRRS 290
+ +GS + + C V+ +W NG +EDD G+ SV N +R
Sbjct: 744 VVTSIGSNLTIACRVSLRPPTTDADVFWISNGMYYEEDDED-GDGRISVANKIYTTDKRR 920
Query: 291 TLITVLNISEIESRFYKHPFTCFA 314
+ + L I+ ++ FTC A
Sbjct: 921 VITSRLKINPVKEE-DATTFTCMA 989
>gb|AF325528.1|AF325528 Lumpy skin disease virus isolate Neethling 2490, complete genome
Length = 150773
Score = 57.4 bits (137), Expect = 4e-06
Identities = 43/161 (26%), Positives = 64/161 (39%)
Frame = -2
Query: 58 YKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENE 117
YK+ K V+ E ASR+ LW P D G Y C R+ + C + I F++ E
Sbjct: 3424 YKNFKKIEVNNENASRVQLIGNNLWLYPVINIDDGIYICRFRSHNICEEMSIKLTFLDKE 3245
Query: 118 PNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGV 177
+ Y + D L+ Y FKN+ L WYK+ +L D+
Sbjct: 3244 ETITYRFNEGLNSTVHCM-DIDLISSY---FKNKT-----LDWYKNNNKVLYDD-RIQSN 3095
Query: 178 KDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITL 218
+ +L++ N G YTC+ Y I R + L
Sbjct: 3094 ELKLVIKNTTHDDSGIYTCNLRINKDSINYDIKRNYNVVVL 2972
Score = 48.5 bits (114), Expect = 0.002
Identities = 65/313 (20%), Positives = 120/313 (37%), Gaps = 27/313 (8%)
Frame = -3
Query: 31 ILVSSANEIDVRPCP-LNPNEHKGTITWYKDDSKTPVST----------EQASRIHQHKE 79
++ + N ++ CP ++ + T+ W+ + V T + R++
Sbjct: 9831 VMKTFENNSEIVKCPYVDTLNYNTTVKWFLVNYNKYVKTGDVKKSFHEFKNTDRVYSVGH 9652
Query: 80 KLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGG 139
LW DSG Y C V NS+Y + + E + +
Sbjct: 9651 SLWINNITKNDSGIYACNVHNSTYYFTSSVMLDVYKKE-----------TINSVIGTNYE 9505
Query: 140 LVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHAS 199
L+C + F N N ++ W+KD + + +N + K++L++ N+++ G Y C +
Sbjct: 9504 LLCINTKNFINTFNCSYEVNWFKD-REKINNNFKYKKSKEKLLIRNISKSDEGVYLCSIT 9328
Query: 200 -------YTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLIC---- 248
K+Y VI+ + K + V+ N T + LG + C
Sbjct: 9327 TDTRCNPKNLALKRYYHNNVIK----KRFKDDINLTVNFLNST--IALGKNFLMECIGES 9166
Query: 249 -NVTGQLSDIAYWKWNG-SVIDED---DPVLGEDYYSVENPANKRRSTLITVLNISEIES 303
N+ +W NG +V+D D + LG + Y N + LI I E++
Sbjct: 9165 KNIQRVYGSSIFWLINGVNVLDYDRSKNIYLGREMY----VGNSYKIALI----IKEVKR 9010
Query: 304 RFYKHPFTCFAKN 316
++ FTC +N
Sbjct: 9009 KYLSANFTCNLRN 8971
>gb|AF156100.1|AF156100 Homo sapiens hemicentin mRNA, complete cds
Length = 18207
Score = 56.6 bits (135), Expect = 6e-06
Identities = 60/217 (27%), Positives = 92/217 (41%), Gaps = 2/217 (0%)
Frame = +2
Query: 56 TWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVE 115
TW+KD PVS + RI L + +ED+G Y CVVRN++ R KI V
Sbjct: 7487 TWFKDG--WPVSLSNSVRILSGGRMLRLMQTTMEDAGQYTCVVRNAAGEER-KIFGLSVL 7657
Query: 116 NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFS 175
P++ + K+ L C + N +P++ W+KD +PL D H
Sbjct: 7658 VPPHI-VGENTLEDVKVKEKQSVTLTC------EVTGNPVPEITWHKDGQPLQEDEAHHI 7816
Query: 176 GVKDRLI-VMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPAN- 233
R + + NV H G YTC AS + G + + F++ PT + S N
Sbjct: 7817 ISGGRFLQITNVQVPHTGRYTCLAS-SPAGHKSRSFSLNVFVS-----PTIAGVGSDGNP 7978
Query: 234 ETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDED 270
E + V L S L+C W +G+ ++ +
Sbjct: 7979 EDVTVILNSPTSLVCEAYSYPPATITWFKDGTPLESN 8089
Score = 55.5 bits (132), Expect = 1e-05
Identities = 51/206 (24%), Positives = 88/206 (41%), Gaps = 7/206 (3%)
Frame = +2
Query: 54 TITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSS------YCLRI 107
T+TWYKD P+++ I L AKVED+G Y CV N + Y +R+
Sbjct: 8654 TLTWYKDGH--PLTSSDKVLILPGGRVLQIPRAKVEDAGRYTCVAVNEAGEDSLQYDVRV 8827
Query: 108 KISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPL 167
+ P + A + +++ V + + + + + P+ W KD +PL
Sbjct: 8828 LV--------PPIIEGANSDLPEEVTVLVNKSALIECL----SSGSPAPRNSWQKDGQPL 8971
Query: 168 LLDNIHFSGVKDRLI-VMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRP 226
L D+ H R++ ++N G Y C A T + ++ L + P P
Sbjct: 8972 LEDDHHKFLSNGRILQILNTQITDIGRYVCVAENTAGSAK-------KYFNLNVHVP--P 9124
Query: 227 VIVSPANETMEVDLGSQIQLICNVTG 252
++ P +E + V + + I L C V+G
Sbjct: 9125 SVIGPKSENLTVVVNNFISLTCEVSG 9202
Score = 51.2 bits (121), Expect = 3e-04
Identities = 59/221 (26%), Positives = 90/221 (40%), Gaps = 4/221 (1%)
Frame = +2
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVP-AKVEDSGHYYCVVRNSSYCLRIKISAKF 113
ITWYKD +S+ QA ++ K + +P A+V DS Y C V N +
Sbjct: 4964 ITWYKDGQPI-MSSSQA--LYIDKGQYLHIPRAQVSDSATYTCHVANVAGTAEKSFHVD- 5131
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLL-DNI 172
V P + N +++ +A L C N P L W KD P+ DN
Sbjct: 5132 VYVPPMIEGNLATPLNKQVVIAHSLTLEC------NAAGNPSPILTWLKDGVPVKANDNF 5293
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA 232
+L +M+ E RG Y C A T + + I ++ + P +
Sbjct: 5294 RIEAGGKKLEIMSAQEIDRGQYICVA--TSVAGEKEIKYEVDVLV--------PPAIEGG 5443
Query: 233 NETME--VDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDD 271
+ET V + + ++L C+VTG W +G +IDE D
Sbjct: 5444 DETSYFIVMVNNLLELDCHVTGSPPPTIMWLKDGQLIDERD 5566
Score = 43.5 bits (101), Expect = 0.055
Identities = 41/153 (26%), Positives = 67/153 (42%), Gaps = 7/153 (4%)
Frame = +2
Query: 54 TITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCL----RIKI 109
TITW+KD TP+ + + RI L + A+ +++G Y CV N + + +K+
Sbjct: 8048 TITWFKDG--TPLESNRNIRILPGGRTLQILNAQEDNAGRYSCVATNEAGEMIKHYEVKV 8221
Query: 110 SAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELP--KLQWYKDCKPL 167
+ N+ +L + + K+ V L C E +P L WYKD +PL
Sbjct: 8222 YIPPIINKGDLWGPGLSPKEVKIKVNNTLTLEC--------EAYAIPSASLSWYKDGQPL 8377
Query: 168 LL-DNIHFSGVKDRLIVMNVAEKHRGNYTCHAS 199
D+++ + L + G YTC AS
Sbjct: 8378 KSDDHVNIAANGHTLQIKEAQISDTGRYTCVAS 8476
Score = 42.7 bits (99), Expect = 0.094
Identities = 33/111 (29%), Positives = 50/111 (44%), Gaps = 1/111 (0%)
Frame = +2
Query: 54 TITWYKDDSKTPVSTEQAS-RIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 112
+ITW KDD PV+T Q + +I L +ED+G Y CV N++ + I
Sbjct: 5798 SITWLKDDQ--PVNTAQGNLKIQSSGRVLQIAKTLLEDAGRYTCVATNAAGETQQHIQLH 5971
Query: 113 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKD 163
+EP +A + + + V+ L C K N +P + WYKD
Sbjct: 5972 V--HEPPSLEDAGKMLNETVLVSNPVQLEC------KAAGNPVPVITWYKD 6100
Score = 40.0 bits (92), Expect = 0.61
Identities = 56/251 (22%), Positives = 92/251 (36%), Gaps = 12/251 (4%)
Frame = +2
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRN----SSYCLRIKIS 110
ITW+KD S Q + + P D+GHY C+ N SS ++ +
Sbjct: 12560 ITWHKDGRAIVESIRQRVLSSGSLQIAFVQPG---DAGHYTCMAANVAGSSSTSTKLTVH 12730
Query: 111 A----KFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKP 166
+ E + N+QAI LP DG P + W KD
Sbjct: 12731 VPPRIRSTEGHYTVNENSQAI----LPCVADG--------------IPTPAINWKKD--N 12850
Query: 167 LLLDNI---HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKP 223
+LL N+ + + LI+ NV + G YTC A+ + ++ + + P
Sbjct: 12851 VLLANLLGKYTAEPYGELILENVVLEDSGFYTCVANNAAGEDTHTVSLTVHVLPTFTELP 13030
Query: 224 TRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDED-DPVLGEDYYSVE 282
+ ++ G Q++L C TG W +N ++I D V G +E
Sbjct: 13031 ----------GDVSLNKGEQLRLSCKATGIPLPKLTWTFNNNIIPAHFDSVNGHSELVIE 13180
Query: 283 NPANKRRSTLI 293
+ + T +
Sbjct: 13181 RVSKEDSGTYV 13213
Score = 38.9 bits (89), Expect = 1.4
Identities = 53/223 (23%), Positives = 80/223 (35%), Gaps = 12/223 (5%)
Frame = +2
Query: 54 TITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSS------YCLRI 107
TI W K+ + S RI KL ++ DSG+Y C+ N Y L I
Sbjct: 9776 TIAWLKNYKRIENSDSLEVRILSGGSKLQIARSQHSDSGNYTCIASNMEGKAQKYYFLSI 9955
Query: 108 KISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENN-ELPKLQWYKDCKP 166
++ P A+ + + + LVC N N P +QW KD KP
Sbjct: 9956 QV--------PPSVAGAEIPSDVSVLLGENVELVC-------NANGIPTPLIQWLKDGKP 10090
Query: 167 LL---LDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFI--TLEEN 221
+ + I S L + G YTC A+ G++ I + ++ T+ N
Sbjct: 10091IASGETERIRVSANGSTLNIYGALTSDTGKYTCVAT-NPAGEEDRIFNLNVYVTPTIRGN 10267
Query: 222 KPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNG 264
K E + + + I + C TG W NG
Sbjct: 10268KDEA--------EKLMTYVDTSINIECRXTGTPPPQINWLKNG 10372
Score = 38.5 bits (88), Expect = 1.8
Identities = 72/308 (23%), Positives = 115/308 (36%), Gaps = 17/308 (5%)
Frame = +2
Query: 54 TITWYKDDSKTPVST-EQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSS------YCLR 106
++TW KD S PVS+ ++ L ++ D+G Y CV N++ LR
Sbjct: 6353 SLTWLKDGS--PVSSFSNGLQVLSGGRILALTSTQISDTGRYTCVAVNAAGEKQRDIDLR 6526
Query: 107 IKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKP 166
+ + + E N+ + Q + + + P P L W KD P
Sbjct: 6527 VYVPPNIMGEEQNV----SVLISQAVELLCQSDAIPP------------PTLTWLKDGHP 6658
Query: 167 LLLD-NIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTR 225
LL + S + L + + + G YTC A+ GK T ++N
Sbjct: 6659 LLKKPGLSISENRSVLKIEDAQVQDTGRYTCEAT-NVAGK-----------TEKKNYNVN 6802
Query: 226 ---PVIVSPANETMEVDL--GSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYS 280
P + ++E ++ + G+ I L+C +G WK GS PVL +
Sbjct: 6803 IWVPPNIGGSDELTQLTVIEGNLISLLCESSGIPPPNLIWKKKGS------PVLTDSMGR 6964
Query: 281 VENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG-IDAAYIQLIY---PVTNFQK 336
V + R+ L IS I + ++C A N G Y +Y +TN
Sbjct: 6965 VRILSGGRQ------LQIS-IAEKSDAALYSCVASNVAGTAKKEYNLQVYIRPTITNSGS 7123
Query: 337 HMIGICVT 344
H I VT
Sbjct: 7124 HPTEIIVT 7147
>dbj|AK056557.1|AK056557 Homo sapiens cDNA FLJ31995 fis, clone NT2RP7009236, weakly similar to
BASEMENT MEMBRANE-SPECIFIC HEPARAN SULFATE PROTEOGLYCAN
CORE PROTEIN PRECURSOR
Length = 3870
Score = 54.3 bits (129), Expect = 3e-05
Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 4/221 (1%)
Frame = +2
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVP-AKVEDSGHYYCVVRNSSYCLRIKISAKF 113
ITWYKD +S+ QA ++ K + +P A+V DS Y C V N +
Sbjct: 2063 ITWYKDGQPI-MSSSQA--LYIDKGQYLHIPRAQVSDSATYTCHVANVAGTAEKSFHVD- 2230
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLL-DNI 172
V P + N +++ +A L C K N P L W KD P+ DNI
Sbjct: 2231 VYVPPMIEGNLATPLNKQVVIAHSLTLEC------KAAGNPSPILTWLKDGVPVKANDNI 2392
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA 232
+L +M+ E RG Y C A T + + I ++ + P +
Sbjct: 2393 RIEAGGKKLEIMSAQEIDRGQYICVA--TSVAGEKEIKYEVDVLV--------PPAIEGG 2542
Query: 233 NETME--VDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDD 271
+ET V + + ++L C+VTG W +G ++DE D
Sbjct: 2543 DETSYFIVMVNNLLELDCHVTGSPPPTIMWLKDGQLVDERD 2665
Score = 42.7 bits (99), Expect = 0.094
Identities = 33/111 (29%), Positives = 50/111 (44%), Gaps = 1/111 (0%)
Frame = +2
Query: 54 TITWYKDDSKTPVSTEQAS-RIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 112
+ITW KDD PV+T Q + +I L +ED+G Y CV N++ + I
Sbjct: 2897 SITWLKDDQ--PVNTAQGNLKIQSSGRVLQIAKTLLEDAGRYTCVATNAAGETQQHIQLH 3070
Query: 113 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKD 163
+EP +A + + + V+ L C K N +P + WYKD
Sbjct: 3071 V--HEPPSLEDAGKMLNETVLVSNPVQLEC------KAAGNPVPVITWYKD 3199
Score = 37.4 bits (85), Expect = 4.0
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 8/154 (5%)
Frame = +2
Query: 54 TITWYKDDSKTPVST-EQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSS------YCLR 106
++TW KD S PVS+ ++ L A++ D+G Y CV N++ LR
Sbjct: 3452 SLTWLKDGS--PVSSFSNGLQVLSGGRILALTSAQISDTGRYTCVAVNAAGEKQRDIDLR 3625
Query: 107 IKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKP 166
+ + + E N+ + Q + + + P P L W KD P
Sbjct: 3626 VYVPPNIMGEEQNV----SVLISQAVELLCQSDAIPP------------PTLTWLKDGHP 3757
Query: 167 LL-LDNIHFSGVKDRLIVMNVAEKHRGNYTCHAS 199
LL + S + L + + + G YTC A+
Sbjct: 3758 LLKKPGLSISENRSVLKIEDAQVQDTGRYTCEAT 3859
>emb|X90569.1|HSTITINN2 H.sapiens mRNA for titin protein (clone hsk1-hsk19)
Length = 23887
Score = 53.5 bits (127), Expect = 5e-05
Identities = 66/279 (23%), Positives = 106/279 (37%), Gaps = 6/279 (2%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
++WYK D+K +T + L F + DSG Y C NS +
Sbjct: 13969 VSWYKGDTKLRPTTTYKMHFRNNVATLVFNQVDINDSGEYICKAENSVGEVSASTFLTVQ 14148
Query: 115 ENEPNLCYNAQAIFKQK---LPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN 171
E + ++ Q Q+ LPV D + +E + WYKD KPL
Sbjct: 14149 EQKLPPSFSRQLRDVQETVGLPVVFDCAI----------SGSEPISVSWYKDGKPLKDSP 14298
Query: 172 IHFSGVKDRLIVMNVAEKHR---GNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI 228
+ D +N+ + R G Y+C A+ +G R+I +T +N P +
Sbjct: 14299 NVQTSFLDNTATLNIFKTDRSLAGQYSCTAT-NPIGSASSSARLI--LTEGKNPPFFDIR 14469
Query: 229 VSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKR 288
++P ++ +G C+VTG W + + Y + N
Sbjct: 14470 LAP----VDAVVGESADFECHVTGTQPIKVSW------AKDSREIRSGGKYQISYLEN-- 14613
Query: 289 RSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQL 327
S +TVL + + +S Y TC+A N G D+ QL
Sbjct: 14614 -SAHLTVLKVDKGDSGQY----TCYAVNEVGKDSCTAQL 14715
Score = 42.7 bits (99), Expect = 0.094
Identities = 52/207 (25%), Positives = 79/207 (38%), Gaps = 8/207 (3%)
Frame = +1
Query: 54 TITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 113
T++WYK D+K + E + + L F + DSG Y C NS K +
Sbjct: 8320 TVSWYKGDTKLRPTPEYRTYFTNNVATLVFNKVNINDSGEYTCKAENSIGTASSKTVFRI 8499
Query: 114 VENE--PNLCYNAQAIFKQ-KLPVAGDGGLVCPYMEFFKNENNELP-KLQWYKDCKPLLL 169
E + P+ + I + LPV L C N P ++ WY+D LL
Sbjct: 8500 QERQLPPSFARQLKDIEQTVGLPVT----LTC-------RLNGSAPIQVCWYRD-GVLLR 8643
Query: 170 D--NIHFSGVKD--RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTR 225
D N+ S V + L ++ H G Y+C AS P+ L +P +
Sbjct: 8644 DHENLQTSFVDNVATLKILQTDLSHSGQYSCSAS-------NPLGTASSSARLTAREPKK 8802
Query: 226 PVIVSPANETMEVDLGSQIQLICNVTG 252
+++V G C+VTG
Sbjct: 8803 SPFFDIKPVSIDVIAGESADFECHVTG 8883
Score = 39.7 bits (91), Expect = 0.80
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 7/156 (4%)
Frame = +1
Query: 50 EHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRN---SSYCLR 106
+ K T+TW KD K P + L AK++DSG Y C N SS C
Sbjct: 1003 DRKVTVTWSKDGQKLPPGKDYKICFEDKIATLEIPLAKLKDSGTYVCTASNEAGSSSC-- 1176
Query: 107 IKISAKFVENEPNLCYNAQAIFKQKLPVAGDGG-LVCPYMEFFKNENNELPKLQWYKDCK 165
SA EP + + L + G+ L C K + + + ++ W+K+ K
Sbjct: 1177 ---SATVTVREPPSF--VKKVDPSYLMLPGESARLHC------KLKGSPVIQVTWFKNNK 1323
Query: 166 PLLLDN---IHFSGVKDRLIVMNVAEKHRGNYTCHA 198
L N ++F + L + +V + G+Y+C A
Sbjct: 1324 ELSESNTVRMYFVNSEAILDITDVKVEDSGSYSCEA 1431
Score = 37.4 bits (85), Expect = 4.0
Identities = 62/279 (22%), Positives = 111/279 (39%), Gaps = 4/279 (1%)
Frame = +1
Query: 54 TITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAK-VEDSGHYYCVVRNSSYCLRIKISAK 112
++TW K+ S ++ + K + +P+ VED+G Y C + N+S + SA+
Sbjct: 13687 SVTWKKNGINVTPS-QRCNITTTEKSPILEIPSSTVEDAGQYNCYIENASG--KDSCSAQ 13857
Query: 113 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYK---DCKPLLL 169
+ EP Y + + K+ V L C + + WYK +P
Sbjct: 13858 ILILEPP--YFVKQLEPVKVSVGDSASLQC------QLAGTPEIGVSWYKGDTKLRPTTT 14013
Query: 170 DNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIV 229
+HF L+ V G Y C A + +G+ T F+T++E K P
Sbjct: 14014 YKMHFRNNVATLVFNQVDINDSGEYICKAENS-VGEVSAST----FLTVQEQK--LPPSF 14172
Query: 230 SPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRR 289
S ++ +G + C ++G W +G + +D P + + ++N A
Sbjct: 14173 SRQLRDVQETVGLPVVFDCAISGSEPISVSWYKDGKPL-KDSPNVQTSF--LDNTA---- 14331
Query: 290 STLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLI 328
LNI + + R ++C A N G ++ +LI
Sbjct: 14332 -----TLNIFKTD-RSLAGQYSCTATNPIGSASSSARLI 14430
Score = 37.0 bits (84), Expect = 5.2
Identities = 51/217 (23%), Positives = 78/217 (35%), Gaps = 7/217 (3%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRN---SSYCLRIKISA 111
ITW+KD++ + + I H L + D+G Y C V N SS C SA
Sbjct: 3265 ITWFKDNTILRSGRKYKTFIQDHLVSLQILKFVAADAGEYQCRVTNEVGSSIC-----SA 3429
Query: 112 KFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELP-KLQWYKDCKPLLLD 170
+ EP I K + + GG F LP + W KD + D
Sbjct: 3430 RVTLREP-----PSFIKKIESTSSLRGGTAA----FQATLKGSLPITVTWLKDSDEITED 3582
Query: 171 N---IHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPV 227
+ + F L + + KH G Y C A I R ++++E P
Sbjct: 3583 DNIRMTFENNVASLYLSGIEVKHDGKYVCQAK-----NDAGIQRCSALLSVKE-----PA 3732
Query: 228 IVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNG 264
++ +++V G L +G A W +G
Sbjct: 3733 TITEEAVSIDVTQGDPATLQVKFSGTKEITAKWFKDG 3843
Score = 36.6 bits (83), Expect = 6.7
Identities = 70/309 (22%), Positives = 113/309 (35%), Gaps = 10/309 (3%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+ WYKD+++ S++ L VEDSG Y C N++ S K V
Sbjct: 12004 VLWYKDETEIQESSKFRMSFVDSVAVLEMHNLSVEDSGDYTCEAHNAAGSASSSTSLK-V 12180
Query: 115 ENEPNLCYNAQAIFKQKLPVAGDGGLVC------PYMEFFKNENNELPKLQWYKDCKPLL 168
+ P I K D L C P+ + + EL + YK
Sbjct: 12181 KEPPIFRKKPHPIETLK---GADVHLECELQGTPPFHVSWYKDKRELRSGKKYKIMSENF 12351
Query: 169 LDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI 228
L +IH ++NV G Y C A+ + I L+ P
Sbjct: 12352 LTSIH---------ILNVDAADIGEYQCKAT-----NDVGSDTCVGSIALK----APPRF 12477
Query: 229 VSPANETMEVDLGSQIQLICNVTG-QLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANK 287
V ++ V +G ++QL + G + + ++K G ++ E D + YS EN
Sbjct: 12478 VKKLSDISTV-VGKEVQLQTTIEGAEPISVVWFKDKGEIVRESDNIWIS--YS-EN---- 12633
Query: 288 RRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAY--IQLIYPVTNFQK-HMIGICVT 344
I L S +E +TC KN G+ + + ++ P T +K I +
Sbjct: 12634 -----IATLQFSRVEPA-NAGKYTCQIKNDAGMQECFATLSVLEPATIVEKPESIKVTTG 12795
Query: 345 LTVIIVCSV 353
T + C+V
Sbjct: 12796 DTCTLECTV 12822
>ref|NM_005010.1| Homo sapiens neuronal cell adhesion molecule (NRCAM), mRNA
Length = 6218
Score = 52.8 bits (125), Expect = 9e-05
Identities = 70/271 (25%), Positives = 111/271 (40%), Gaps = 5/271 (1%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEK-LWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 113
I W K+D P + ++++ EK L + DSG+Y C+ +N+ + IS +
Sbjct: 1261 IYWAKEDGMLPKNRT----VYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVR- 1425
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLL--DN 171
V+ P Y A L DG L+C + N P++ W + P+ + D+
Sbjct: 1426 VKAAP---YWITAPQNLVLSPGEDGTLIC------RANGNPKPRISWLTNGVPIEIAPDD 1578
Query: 172 IHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSP 231
D +I NV E+ Y C+AS Y Y + + E P I++P
Sbjct: 1579 PSRKIDGDTIIFSNVQERSSAVYQCNASNEY---GYLLANAFVNVLAEP-----PRILTP 1734
Query: 232 ANETMEVDLGSQIQLICNVTGQ-LSDIAYWKW-NGSVIDEDDPVLGEDYYSVENPANKRR 289
AN +V L C G L I ++K GS + ED VL E+ ++E P ++
Sbjct: 1735 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHEN-GTLEIPVAQKD 1911
Query: 290 STLITVLNISEIESRFYKHPFTCFAKNTHGI 320
ST +TC A+N G+
Sbjct: 1912 ST----------------GTYTCVARNKLGM 1956
>dbj|AB002341.1|AB002341 Human mRNA for KIAA0343 gene, complete cds
Length = 6218
Score = 52.8 bits (125), Expect = 9e-05
Identities = 70/271 (25%), Positives = 111/271 (40%), Gaps = 5/271 (1%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEK-LWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 113
I W K+D P + ++++ EK L + DSG+Y C+ +N+ + IS +
Sbjct: 1261 IYWAKEDGMLPKNRT----VYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVR- 1425
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLL--DN 171
V+ P Y A L DG L+C + N P++ W + P+ + D+
Sbjct: 1426 VKAAP---YWITAPQNLVLSPGEDGTLIC------RANGNPKPRISWLTNGVPIEIAPDD 1578
Query: 172 IHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSP 231
D +I NV E+ Y C+AS Y Y + + E P I++P
Sbjct: 1579 PSRKIDGDTIIFSNVQERSSAVYQCNASNEY---GYLLANAFVNVLAEP-----PRILTP 1734
Query: 232 ANETMEVDLGSQIQLICNVTGQ-LSDIAYWKW-NGSVIDEDDPVLGEDYYSVENPANKRR 289
AN +V L C G L I ++K GS + ED VL E+ ++E P ++
Sbjct: 1735 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHEN-GTLEIPVAQKD 1911
Query: 290 STLITVLNISEIESRFYKHPFTCFAKNTHGI 320
ST +TC A+N G+
Sbjct: 1912 ST----------------GTYTCVARNKLGM 1956
>dbj|AK056544.1|AK056544 Homo sapiens cDNA FLJ31982 fis, clone NT2RP7008550, highly similar to
Mus musculus rig-1 protein mRNA
Length = 3384
Score = 52.8 bits (125), Expect = 9e-05
Identities = 67/273 (24%), Positives = 103/273 (37%), Gaps = 8/273 (2%)
Frame = +2
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+ W K+D + P + H LW ED G Y CV NS R + S
Sbjct: 1034 LRWRKEDGELPTGRYEIRSDHS----LWIGHVSAEDEGTYTCVAENSVG--RAEASGSLS 1195
Query: 115 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
+ P Q + + + +A G V E + N P + W K+ +LL
Sbjct: 1196 VHVP-----PQLVTQPQDQMAAPGESVAFQCE---TKGNPPPAIFWQKEGSQVLLFPSQS 1351
Query: 175 SGVKDRLIV-----MNVAEKHRGN---YTCHASYTYLGKQYPITRVIEFITLEENKPTRP 226
R V +N+ RG+ Y C A I+ +L+ P
Sbjct: 1352 LQPTGRFSVSPRGQLNITAVQRGDAGYYMCQAVSVAGSILAKALLEIKGASLDGLPPV-- 1525
Query: 227 VIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPAN 286
++ PAN+T+ LGS + L C VTG WK +G + DD + AN
Sbjct: 1526 ILQGPANQTLV--LGSSVWLPCRVTGNPQPSVRWKKDGQWLQGDD-------LQFKTMAN 1678
Query: 287 KRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 319
+ + N+ E++ FY +C AK++ G
Sbjct: 1679 ----GTLYIANVQEMDMGFY----SCVAKSSTG 1753
>emb|X57205.1|HSFGFR4 Human FGFR-4 mRNA for fibroblast growth factor receptor (FGFR-4)
Length = 2915
Score = 52.8 bits (125), Expect = 9e-05
Identities = 75/350 (21%), Positives = 131/350 (37%), Gaps = 59/350 (16%)
Frame = +2
Query: 30 IILVSSANEIDVRPC---PLNPNEHKGTIT-----------------WYKDDSKTPVSTE 69
++ + ++ E+++ PC L E + T+ WYK+ S+
Sbjct: 110 VLSLEASEEVELEPCLAPSLEQQEQELTVALGQPVRLCCGRAERGGHWYKEGSRLA---- 277
Query: 70 QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRI-------KISAKFVENEPNL-- 120
A R+ + +L ED+G Y C+ R S L+ +++ + +P
Sbjct: 278 PAGRVRGWRGRLEIASFLPEDAGRYLCLARGSMIVLQNLTLITGDSLTSSNDDEDPKSHR 457
Query: 121 ------CYNAQAIF-------KQKLPVAGDGGLV---CPYMEFFKNENNELPKLQWYKDC 164
Y QA + ++KL G V CP N P ++W KD
Sbjct: 458 DPSNRHSYPQQAPYWTHPQRMEKKLHAVPAGNTVKFRCPAA------GNPTPTIRWLKDG 619
Query: 165 KPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLE 219
+ +N G++ R L++ +V RG YTC +Y + +
Sbjct: 620 QAFHGEN-RIGGIRLRHQHWSLVMESVVPSDRGTYTCLVENAVGSIRYNY-----LLDVL 781
Query: 220 ENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGED 277
E P RP++ + PAN T V GS ++L+C V W + + +G
Sbjct: 782 ERSPHRPILQAGLPANTTAVV--GSDVELLCKVYSDAQPHIQWLKHIVINGSSFGAVGFP 955
Query: 278 YYSVENPANKRRSTLITVLNISEIESRFYKH-------PFTCFAKNTHGI 320
Y V A+ +N SE+E + ++ +TC A N+ G+
Sbjct: 956 YVQVLKTAD---------INSSEVEVLYLRNVSAEDAGEYTCLAGNSIGL 1078
>ref|XM_027222.2| Homo sapiens neuronal cell adhesion molecule (NRCAM), mRNA
Length = 3900
Score = 52.8 bits (125), Expect = 9e-05
Identities = 70/271 (25%), Positives = 111/271 (40%), Gaps = 5/271 (1%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEK-LWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 113
I W K+D P + ++++ EK L + DSG+Y C+ +N+ + IS +
Sbjct: 889 IYWAKEDGMLPKNRT----VYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVR- 1053
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLL--DN 171
V+ P Y A L DG L+C + N P++ W + P+ + D+
Sbjct: 1054 VKAAP---YWITAPQNLVLSPGEDGTLIC------RANGNPKPRISWLTNGVPIEIAPDD 1206
Query: 172 IHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSP 231
D +I NV E+ Y C+AS Y Y + + E P I++P
Sbjct: 1207 PSRKIDGDTIIFSNVQERSSAVYQCNASNEY---GYLLANAFVNVLAEP-----PRILTP 1362
Query: 232 ANETMEVDLGSQIQLICNVTGQ-LSDIAYWKW-NGSVIDEDDPVLGEDYYSVENPANKRR 289
AN +V L C G L I ++K GS + ED VL E+ ++E P ++
Sbjct: 1363 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHEN-GTLEIPVAQKD 1539
Query: 290 STLITVLNISEIESRFYKHPFTCFAKNTHGI 320
ST +TC A+N G+
Sbjct: 1540 ST----------------GTYTCVARNKLGM 1584
>ref|NM_008011.1| Mus musculus fibroblast growth factor receptor 4 (Fgfr4), mRNA
Length = 3098
Score = 52.8 bits (125), Expect = 9e-05
Identities = 74/307 (24%), Positives = 117/307 (38%), Gaps = 43/307 (14%)
Frame = +3
Query: 57 WYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNS-----SYCLRIKISA 111
WYK+ S+ A R+ + +L ED+G Y C+ R S + L + S
Sbjct: 291 WYKEGSRLA----SAGRVRGWRGRLEIASFLPEDAGRYLCLARGSMTVVHNLTLLMDDSL 458
Query: 112 KFVENEPNL----------CYNAQAIF-------KQKLPVAGDGGLV---CPYMEFFKNE 151
+ N+ + Y QA + ++KL G V CP
Sbjct: 459 TSISNDEDPKTLSSSSSGHVYPQQAPYWTHPQRMEKKLHAVPAGNTVKFRCPACR----- 623
Query: 152 NNELPKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTYLGKQ 206
N +P + W KD + +N G++ R L++ +V RG YTC + +
Sbjct: 624 -NPMPTIHWLKDGQAFHGEN-RIGGIRLRHQHWSLVMESVVPSDRGTYTCLVENSLGSIR 797
Query: 207 YPITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW---- 260
Y + + E P RP++ + PAN T V GS ++L+C V W
Sbjct: 798 YSY-----LLDVLERSPHRPILQAGLPANTTAVV--GSDVELLCKVYSDAQPHIQWLKHV 956
Query: 261 KWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKH-------PFTCF 313
NGS D G Y V T +NISE++ + ++ +TC
Sbjct: 957 VINGSSFGAD----GFPYVQV---------LKTTDINISEVQVLYLRNVSAEDAGEYTCL 1097
Query: 314 AKNTHGI 320
A N+ G+
Sbjct: 1098AGNSIGL 1118
>emb|AJ001057.1|HSC7NRCAM Homo sapiens mRNA for NrCAM protein
Length = 3900
Score = 52.8 bits (125), Expect = 9e-05
Identities = 70/271 (25%), Positives = 111/271 (40%), Gaps = 5/271 (1%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEK-LWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 113
I W K+D P + ++++ EK L + DSG+Y C+ +N+ + IS +
Sbjct: 889 IYWAKEDGMLPKNRT----VYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVR- 1053
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLL--DN 171
V+ P Y A L DG L+C + N P++ W + P+ + D+
Sbjct: 1054 VKAAP---YWITAPQNLVLSPGEDGTLIC------RANGNPKPRISWLTNGVPIEIAPDD 1206
Query: 172 IHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSP 231
D +I NV E+ Y C+AS Y Y + + E P I++P
Sbjct: 1207 PSRKIDGDTIIFSNVQERSSAVYQCNASNEY---GYLLANAFVNVLAEP-----PRILTP 1362
Query: 232 ANETMEVDLGSQIQLICNVTGQ-LSDIAYWKW-NGSVIDEDDPVLGEDYYSVENPANKRR 289
AN +V L C G L I ++K GS + ED VL E+ ++E P ++
Sbjct: 1363 ANTLYQVIANRPALLDCAFFGSPLPTIQWFKGAKGSALHEDIYVLHEN-GTLEIPVAQKD 1539
Query: 290 STLITVLNISEIESRFYKHPFTCFAKNTHGI 320
ST +TC A+N G+
Sbjct: 1540 ST----------------GTYTCVARNKLGM 1584
>emb|X59927.1|MMFGFR4M M.musculus mRNA for fibroblast growth facter receptor 4 (FGFR-4)
Length = 3098
Score = 52.8 bits (125), Expect = 9e-05
Identities = 74/307 (24%), Positives = 117/307 (38%), Gaps = 43/307 (14%)
Frame = +3
Query: 57 WYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNS-----SYCLRIKISA 111
WYK+ S+ A R+ + +L ED+G Y C+ R S + L + S
Sbjct: 291 WYKEGSRLA----SAGRVRGWRGRLEIASFLPEDAGRYLCLARGSMTVVHNLTLLMDDSL 458
Query: 112 KFVENEPNL----------CYNAQAIF-------KQKLPVAGDGGLV---CPYMEFFKNE 151
+ N+ + Y QA + ++KL G V CP
Sbjct: 459 TSISNDEDPKTLSSSSSGHVYPQQAPYWTHPQRMEKKLHAVPAGNTVKFRCPACR----- 623
Query: 152 NNELPKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTYLGKQ 206
N +P + W KD + +N G++ R L++ +V RG YTC + +
Sbjct: 624 -NPMPTIHWLKDGQAFHGEN-RIGGIRLRHQHWSLVMESVVPSDRGTYTCLVENSLGSIR 797
Query: 207 YPITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW---- 260
Y + + E P RP++ + PAN T V GS ++L+C V W
Sbjct: 798 YSY-----LLDVLERSPHRPILQAGLPANTTAVV--GSDVELLCKVYSDAQPHIQWLKHV 956
Query: 261 KWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKH-------PFTCF 313
NGS D G Y V T +NISE++ + ++ +TC
Sbjct: 957 VINGSSFGAD----GFPYVQV---------LKTTDINISEVQVLYLRNVSAEDAGEYTCL 1097
Query: 314 AKNTHGI 320
A N+ G+
Sbjct: 1098AGNSIGL 1118
>gb|AC084594.1|CBRG42E21 Caenorhabditis briggsae cosmid G42E21, complete sequence
Length = 39130
Score = 52.4 bits (124), Expect = 1e-04
Identities = 71/320 (22%), Positives = 131/320 (40%), Gaps = 20/320 (6%)
Frame = -2
Query: 22 KCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIH----QH 77
KC E + IL N I P P I W++++++ + Q R+
Sbjct: 23931 KCSESD---ILKLEVN-IKANPAP--------EINWFRNEAE--IEHSQRHRLQFDDGSG 23794
Query: 78 KEKLWFVPAKVEDSGHYYCVVRN------SSYCLRIK----ISAKFVENEPNLCYNAQAI 127
L + A EDSG Y CV +N + C+RI+ +K ++ + Q
Sbjct: 23793 NYSLTIIDAYAEDSGEYKCVAKNKIGKAHTVCCVRIEELLAKRSKKIDGSKAPRFRMQLP 23614
Query: 128 FKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN---IHFSGVKDRLIVM 184
+++P D LVC P ++W KD +P+ + N H +GV L ++
Sbjct: 23613 TPREVPQGSDLTLVCSV------SGTPHPNIRWTKDDQPIDMSNKQVRHENGV-CTLHII 23455
Query: 185 NVAEKHRGNYTCHASYTY-LGKQYPITRVIEFITLEENKP--TRPVIVSPANETMEVDLG 241
++ +G Y C A + + + + + + E + + KP P++ E G
Sbjct: 23454 GARDEDQGRYVCEAENIHGVAQSFSVVEIKEAVDKDHIKPKFLEPLVNCSTCE------G 23293
Query: 242 SQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEI 301
++I L C VTG+ W +G + ++ +L +++ + + ++N+
Sbjct: 23292 NEIVLECCVTGKPIPAITWYKDGLKLIIENRML--------QYTDRKGVSRLNIMNVVMD 23137
Query: 302 ESRFYKHPFTCFAKNTHGID 321
++ Y TC A NT G D
Sbjct: 23136 DAGEY----TCEAVNTLGKD 23089
Score = 38.5 bits (88), Expect = 1.8
Identities = 18/48 (37%), Positives = 26/48 (53%), Gaps = 4/48 (8%)
Frame = -2
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKD----RLIVMNVAEKHRGNYTCHAS 199
PK+QWYKD K L + ++ + + L V N+ E G YTC A+
Sbjct: 24558 PKVQWYKDDKELTVPSMKYDSFYNEGLAELTVKNIVESDAGKYTCRAT 24415
>gb|AF303661.1|AF303661 Halocynthia roretzi FGF receptor (FGFR) mRNA, complete cds
Length = 3475
Score = 52.4 bits (124), Expect = 1e-04
Identities = 83/356 (23%), Positives = 139/356 (38%), Gaps = 46/356 (12%)
Frame = +3
Query: 64 TPVSTEQA-SRIHQHKEKLWFVPAKVEDSGHYYCVV-----RNSSYCLRIKI----SAKF 113
TP T+ R+ L PA +EDSG Y C+ +NSS +++ S K
Sbjct: 339 TPDDTDPTIMRVRVLGTTLRIFPAYLEDSGLYTCIAHNANEKNSSLSYHVEVLDDDSIKD 518
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYM----EFFKN----------------ENN 153
+ PN + K A G PY + K + N
Sbjct: 519 WNHLPNEGNEENVVSAPKQDGASGGQK--PYWTKREKMMKRLHAEPAGNTVRFRCAVDGN 692
Query: 154 ELPKLQWYKDCKPLLLDNIHFSGVKDR---LIVMNVAEKHRGNYTCHASYTYLGKQYPIT 210
P++ WYK+ ++ N G K R LI+ +V +GNY C A Y +
Sbjct: 693 PKPQVLWYKN-DLIVQKNDRVGGYKYRNQVLILESVVLSDKGNYMCVARNEYGSINHTYQ 869
Query: 211 RVIEFITLEENKPTRPVIV--SPANETMEVDLGSQIQLICNVTGQLSDIAYW----KWNG 264
+ ++E +RP++ PAN+++ V G ++ C V W + NG
Sbjct: 870 -----LDVQERSASRPILKFGLPANKSVYV--GQDVEFKCEVFSDPHPHVKWLRHIEING 1028
Query: 265 SVIDEDDPVLGEDYYSV--ENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDA 322
S + DP DY + ++ N+ + + N++E +S Y TC A+N G +
Sbjct: 1029SRV---DPKTNRDYVQIIKQSGVNETAVQTLRLKNVTESDSGQY----TCLAENYIGNEN 1187
Query: 323 AYIQLIY-----PVTNFQKHMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDSCYD 373
L+ P T+ I + + ++C V + +F + +VL CY+
Sbjct: 1188NSAWLVVQKVPPPTTDTITKGIPNETNIIIYVMCGVLVI-LFGLAVVLVLYYHCYN 1352
>gb|BC011847.1|BC011847 Homo sapiens, fibroblast growth factor receptor 4, clone MGC:20292
IMAGE:4121396, mRNA, complete cds
Length = 3184
Score = 52.0 bits (123), Expect = 2e-04
Identities = 79/354 (22%), Positives = 132/354 (36%), Gaps = 63/354 (17%)
Frame = +3
Query: 30 IILVSSANEIDVRPC---PLNPNEHKGTIT-----------------WYKDDSKTPVSTE 69
++ + ++ E+++ PC L E + T+ WYK+ S+
Sbjct: 309 VLSLEASEEVELEPCLAPSLEQQEQELTVALGQPVRLCCGRAERGGHWYKEGSRLA---- 476
Query: 70 QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRI-------KISAKFVENEPNL-- 120
A R+ + +L ED+G Y C+ R S L+ +++ + +P
Sbjct: 477 PAGRVRGWRGRLEIASFLPEDAGRYLCLARGSMIVLQNLTLITGDSLTSSNDDEDPKSHR 656
Query: 121 ------CYNAQAIF-------KQKLPVAGDGGLV---CPYMEFFKNENNELPKLQWYKDC 164
Y QA + ++KL G V CP N P ++W KD
Sbjct: 657 DPSNRHSYPQQAPYWTHPQRMEKKLHAVPAGNTVKFRCPAA------GNPTPTIRWLKDG 818
Query: 165 KPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLE 219
+ +N G++ R L++ +V RG YTC +Y + +
Sbjct: 819 QAFHGEN-RIGGIRLRHQHWSLVMESVVPSDRGTYTCLVENAVGSIRYNY-----LLDVL 980
Query: 220 ENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW----KWNGSVIDEDDPV 273
E P RP++ + PAN T V GS ++L+C V W NGS D
Sbjct: 981 ERSPHRPILQAGLPANTTAVV--GSDVELLCKVYSDAQPHIQWLKHIVINGSSFGAD--- 1145
Query: 274 LGEDYYSVENPANKRRSTLITVLNISEIESRFYKH-------PFTCFAKNTHGI 320
G Y V A+ +N SE+E + ++ +TC A N+ G+
Sbjct: 1146-GFPYVQVLKTAD---------INSSEVEVLYLRNVSAEDAGEYTCLAGNSIGL 1277
>gb|L03840.1|HUMFGFR4X Human fibroblast growth factor receptor 4 (FGFR4) mRNA, complete
cds
Length = 3031
Score = 52.0 bits (123), Expect = 2e-04
Identities = 79/354 (22%), Positives = 132/354 (36%), Gaps = 63/354 (17%)
Frame = +3
Query: 30 IILVSSANEIDVRPC---PLNPNEHKGTIT-----------------WYKDDSKTPVSTE 69
++ + ++ E+++ PC L E + T+ WYK+ S+
Sbjct: 225 VLSLEASEEVELEPCLAPSLEQQEQELTVALGQPVRLCCGRAERGGHWYKEGSRLA---- 392
Query: 70 QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRI-------KISAKFVENEPNL-- 120
A R+ + +L ED+G Y C+ R S L+ +++ + +P
Sbjct: 393 PAGRVRGWRGRLEIASFLPEDAGRYLCLARGSMIVLQNLTLITGDSLTSSNDDEDPKSHR 572
Query: 121 ------CYNAQAIF-------KQKLPVAGDGGLV---CPYMEFFKNENNELPKLQWYKDC 164
Y QA + ++KL G V CP N P ++W KD
Sbjct: 573 DPSNRHSYPQQAPYWTHPQRMEKKLHAVPAGNTVKFRCPAA------GNPTPTIRWLKDG 734
Query: 165 KPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLE 219
+ +N G++ R L++ +V RG YTC +Y + +
Sbjct: 735 QAFHGEN-RIGGIRLRHQHWSLVMESVVPSDRGTYTCLVENAVGSIRYNY-----LLDVL 896
Query: 220 ENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW----KWNGSVIDEDDPV 273
E P RP++ + PAN T V GS ++L+C V W NGS D
Sbjct: 897 ERSPHRPILQAGLPANTTAVV--GSDVELLCKVYSDAQPHIQWLKHIVINGSSFGAD--- 1061
Query: 274 LGEDYYSVENPANKRRSTLITVLNISEIESRFYKH-------PFTCFAKNTHGI 320
G Y V A+ +N SE+E + ++ +TC A N+ G+
Sbjct: 1062-GFPYVQVLKTAD---------INSSEVEVLYLRNVSAEDAGEYTCLAGNSIGL 1193
>gb|AF381545.1|AF381545 Homo sapiens membrane glycoprotein LIG-1 mRNA, complete cds
Length = 4762
Score = 52.0 bits (123), Expect = 2e-04
Identities = 38/149 (25%), Positives = 63/149 (41%), Gaps = 2/149 (1%)
Frame = +3
Query: 55 ITWYKDDSKT-PVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 113
I W KD P + E+ + + + K++D+G Y C +NS+ + +
Sbjct: 1902 IAWQKDGGTDFPAARERRMHVMPDDDVFFITDVKIDDAGVYSCTAQNSAGSISANATLTV 2081
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPL-LLDNI 172
+E P+L + + + V L C K N P++ W+K +PL L +
Sbjct: 2082 LET-PSLVVPLE---DRVVSVGETVALQC------KATGNPPPRITWFKGDRPLSLTERH 2231
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYT 201
H + L+V NV + G YTC S T
Sbjct: 2232 HLTPDNQLLVVQNVVAEDAGRYTCEMSNT 2318
>ref|NM_022963.1| Homo sapiens fibroblast growth factor receptor 4 (FGFR4),
transcript variant 2, mRNA
Length = 2895
Score = 52.0 bits (123), Expect = 2e-04
Identities = 79/354 (22%), Positives = 132/354 (36%), Gaps = 63/354 (17%)
Frame = +1
Query: 30 IILVSSANEIDVRPC---PLNPNEHKGTIT-----------------WYKDDSKTPVSTE 69
++ + ++ E+++ PC L E + T+ WYK+ S+
Sbjct: 211 VLSLEASEEVELEPCLAPSLEQQEQELTVALGQPVRLCCGRAERGGHWYKEGSRLA---- 378
Query: 70 QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRI-------KISAKFVENEPNL-- 120
A R+ + +L ED+G Y C+ R S L+ +++ + +P
Sbjct: 379 PAGRVRGWRGRLEIASFLPEDAGRYLCLARGSMIVLQNLTLITGDSLTSSNDDEDPKSHR 558
Query: 121 ------CYNAQAIF-------KQKLPVAGDGGLV---CPYMEFFKNENNELPKLQWYKDC 164
Y QA + ++KL G V CP N P ++W KD
Sbjct: 559 DLSNRHSYPQQAPYWTHPQRMEKKLHAVPAGNTVKFRCPAA------GNPTPTIRWLKDG 720
Query: 165 KPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLE 219
+ +N G++ R L++ +V RG YTC +Y + +
Sbjct: 721 QAFHGEN-RIGGIRLRHQHWSLVMESVVPSDRGTYTCLVENAVGSIRYNY-----LLDVL 882
Query: 220 ENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW----KWNGSVIDEDDPV 273
E P RP++ + PAN T V GS ++L+C V W NGS D
Sbjct: 883 ERSPHRPILQAGLPANTTAVV--GSDVELLCKVYSDAQPHIQWLKHIVINGSSFGAD--- 1047
Query: 274 LGEDYYSVENPANKRRSTLITVLNISEIESRFYKH-------PFTCFAKNTHGI 320
G Y V A+ +N SE+E + ++ +TC A N+ G+
Sbjct: 1048-GFPYVQVLKTAD---------INSSEVEVLYLRNVSAEDAGEYTCLAGNSIGL 1179
>ref|XM_033712.3| Homo sapiens ortholog of mouse integral membrane glycoprotein LIG-1
(LIG1), mRNA
Length = 5267
Score = 52.0 bits (123), Expect = 2e-04
Identities = 38/149 (25%), Positives = 63/149 (41%), Gaps = 2/149 (1%)
Frame = +2
Query: 55 ITWYKDDSKT-PVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 113
I W KD P + E+ + + + K++D+G Y C +NS+ + +
Sbjct: 2408 IAWQKDGGTDFPAARERRMHVMPDDDVFFITDVKIDDAGVYSCTAQNSAGSISANATLTV 2587
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPL-LLDNI 172
+E P+L + + + V L C K N P++ W+K +PL L +
Sbjct: 2588 LET-PSLVVPLE---DRVVSVGETVALQC------KATGNPPPRITWFKGDRPLSLTERH 2737
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYT 201
H + L+V NV + G YTC S T
Sbjct: 2738 HLTPDNQLLVVQNVVAEDAGRYTCEMSNT 2824
>ref|NM_002011.2| Homo sapiens fibroblast growth factor receptor 4 (FGFR4),
transcript variant 1, mRNA
Length = 3015
Score = 52.0 bits (123), Expect = 2e-04
Identities = 79/354 (22%), Positives = 132/354 (36%), Gaps = 63/354 (17%)
Frame = +1
Query: 30 IILVSSANEIDVRPC---PLNPNEHKGTIT-----------------WYKDDSKTPVSTE 69
++ + ++ E+++ PC L E + T+ WYK+ S+
Sbjct: 211 VLSLEASEEVELEPCLAPSLEQQEQELTVALGQPVRLCCGRAERGGHWYKEGSRLA---- 378
Query: 70 QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRI-------KISAKFVENEPNL-- 120
A R+ + +L ED+G Y C+ R S L+ +++ + +P
Sbjct: 379 PAGRVRGWRGRLEIASFLPEDAGRYLCLARGSMIVLQNLTLITGDSLTSSNDDEDPKSHR 558
Query: 121 ------CYNAQAIF-------KQKLPVAGDGGLV---CPYMEFFKNENNELPKLQWYKDC 164
Y QA + ++KL G V CP N P ++W KD
Sbjct: 559 DLSNRHSYPQQAPYWTHPQRMEKKLHAVPAGNTVKFRCPAA------GNPTPTIRWLKDG 720
Query: 165 KPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLE 219
+ +N G++ R L++ +V RG YTC +Y + +
Sbjct: 721 QAFHGEN-RIGGIRLRHQHWSLVMESVVPSDRGTYTCLVENAVGSIRYNY-----LLDVL 882
Query: 220 ENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW----KWNGSVIDEDDPV 273
E P RP++ + PAN T V GS ++L+C V W NGS D
Sbjct: 883 ERSPHRPILQAGLPANTTAVV--GSDVELLCKVYSDAQPHIQWLKHIVINGSSFGAD--- 1047
Query: 274 LGEDYYSVENPANKRRSTLITVLNISEIESRFYKH-------PFTCFAKNTHGI 320
G Y V A+ +N SE+E + ++ +TC A N+ G+
Sbjct: 1048-GFPYVQVLKTAD---------INSSEVEVLYLRNVSAEDAGEYTCLAGNSIGL 1179
>dbj|AB050468.1|AB050468 Homo sapiens mRNA for membrane glycoprotein LIG-1, complete cds
Length = 5287
Score = 52.0 bits (123), Expect = 2e-04
Identities = 38/149 (25%), Positives = 63/149 (41%), Gaps = 2/149 (1%)
Frame = +1
Query: 55 ITWYKDDSKT-PVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 113
I W KD P + E+ + + + K++D+G Y C +NS+ + +
Sbjct: 2407 IAWQKDGGTDFPAARERRMHVMPDDDVFFITDVKIDDAGVYSCTAQNSAGSISANATLTV 2586
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPL-LLDNI 172
+E P+L + + + V L C K N P++ W+K +PL L +
Sbjct: 2587 LET-PSLVVPLE---DRVVSVGETVALQC------KATGNPPPRITWFKGDRPLSLTERH 2736
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYT 201
H + L+V NV + G YTC S T
Sbjct: 2737 HLTPDNQLLVVQNVVAEDAGRYTCEMSNT 2823
>emb|AL117666.1|HSM801204 Homo sapiens mRNA; cDNA DKFZp586O1624 (from clone DKFZp586O1624);
partial cds
Length = 2958
Score = 52.0 bits (123), Expect = 2e-04
Identities = 38/149 (25%), Positives = 63/149 (41%), Gaps = 2/149 (1%)
Frame = +2
Query: 55 ITWYKDDSKT-PVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 113
I W KD P + E+ + + + K++D+G Y C +NS+ + +
Sbjct: 59 IAWQKDGGTDFPAARERRMHVMPDDDVFFITDVKIDDAGVYSCTAQNSAGSISANATLTV 238
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPL-LLDNI 172
+E P+L + + + V L C K N P++ W+K +PL L +
Sbjct: 239 LET-PSLVVPLE---DRVVSVGETVALQC------KATGNPPPRITWFKGDRPLSLTERH 388
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYT 201
H + L+V NV + G YTC S T
Sbjct: 389 HLTPDNQLLVVQNVVAEDAGRYTCEMSNT 475
>gb|U55258.1|HSU55258 Human hBRAVO/Nr-CAM precursor (hBRAVO/Nr-CAM) gene, complete cds
Length = 4134
Score = 51.2 bits (121), Expect = 3e-04
Identities = 68/271 (25%), Positives = 113/271 (41%), Gaps = 5/271 (1%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEK-LWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 113
I W K+D P + ++++ EK L + DSG+Y C+ +N+ + IS +
Sbjct: 1018 IYWAKEDGMLPKNRT----VYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVR- 1182
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLL--DN 171
V+ P Y A L DG L+C + N P++ W + P+ + D+
Sbjct: 1183 VKAAP---YWITAPQNLVLSPGEDGTLIC------RANGNPKPRISWLTNGVPIEIAPDD 1335
Query: 172 IHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSP 231
D +I NV E+ Y C+AS Y Y + + E P I++P
Sbjct: 1336 PSRKIDGDTIIFSNVQERSSAVYQCNASNEY---GYLLANAFVNVLAEP-----PRILTP 1491
Query: 232 ANETMEVDLGSQIQLICNVTGQ-LSDIAYWKW-NGSVIDEDDPVLGEDYYSVENPANKRR 289
AN +V L C G L I ++K GS + ED VL E+ K
Sbjct: 1492 ANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHEN----GTLEIKDA 1659
Query: 290 STLITVLNISEIESRFYKHPFTCFAKNTHGI 320
+ ++ + +++ +S +TC A+N G+
Sbjct: 1660 TWIVKEIPVAQKDS---TGTYTCVARNKLGM 1743
>ref|XM_078921.1| BcDNA:GH11322, mRNA
Length = 2711
Score = 51.2 bits (121), Expect = 3e-04
Identities = 57/199 (28%), Positives = 79/199 (39%), Gaps = 6/199 (3%)
Frame = +3
Query: 56 TWYKDDSKTPVSTEQASRIHQHKE-KLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+WYKD + R + + L P + D G Y C VRNS L+ + +
Sbjct: 882 SWYKDGVLLQEVQDLVRRFYMGPDGSLSIDPTMMSDLGEYECKVRNSDGELQTAKAFLNI 1061
Query: 115 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
+ + + Y +F LP L C + N L L+W KD LL D+ +
Sbjct: 1062 QYKAKVIYAPPEVF---LPYGQPAVLDCHF-----RANPPLKNLRWEKD--GLLFDSYNV 1211
Query: 175 SGV----KDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS 230
GV L V E H G+YTC Y LG P + VI I L RP I S
Sbjct: 1212 PGVFYKMNGSLFFAKVDENHAGSYTC-TPYNDLGTDGP-SPVISVIVL------RPPIFS 1367
Query: 231 PANETMEVD-LGSQIQLIC 248
+ + + LG +L C
Sbjct: 1368 VTPKAIYIQKLGEAAELPC 1424
>gb|U10986.1|XLU10986 Xenopus laevis deleted in colorectal cancer tumor suppressor (XDCCa)
mRNA, complete cds
Length = 4846
Score = 51.2 bits (121), Expect = 3e-04
Identities = 64/284 (22%), Positives = 113/284 (39%), Gaps = 7/284 (2%)
Frame = +3
Query: 54 TITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 113
TI+W K++ V+ + L + D G Y C+ +N R+ A+
Sbjct: 948 TISWQKNEEDLKVTPGDPRLLVLPSGTLQISRLQTADGGVYRCLAKNPGSA-RVGNEAEL 1124
Query: 114 -VENEPNLCYNAQAIFKQK----LPVAG-DGGLVCPYMEFFKNENNELPKLQWYKDCKPL 167
+ +E L + Q +F Q+ + + G D L C + P + W + +P+
Sbjct: 1125 RILSESGL--HRQQVFLQRPSNVVAIEGQDAVLECAVSGY------PTPTIVWMQGDEPV 1280
Query: 168 LLDNIHFSGVK-DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRP 226
+ +S + L++ NV + G YTC A+Y + + N P
Sbjct: 1281 PIRTRKYSVLGGSNLLISNVTDDDAGAYTCVATYKNENTSFSADLTVMVPPQFLNHPANL 1460
Query: 227 VIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPAN 286
A E+M+++ C V+G+ S W NG V V+ DY+ + + +N
Sbjct: 1461 Y----AYESMDIEFE------CAVSGKPSPTVKWTKNGEV------VIPSDYFQIVDGSN 1592
Query: 287 KRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 330
R +L + + + +Y+ C A+N G Y QLI P
Sbjct: 1593 LR------ILGLVKSDEGYYQ----CIAENEAGNIQTYAQLIIP 1694
>ref|NM_072181.1| titin
Length = 8352
Score = 51.2 bits (121), Expect = 3e-04
Identities = 60/259 (23%), Positives = 103/259 (39%), Gaps = 16/259 (6%)
Frame = +1
Query: 22 KCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEK- 80
KC E + IL N I P P I W++++S+ S +
Sbjct: 2257 KCSESD---ILKLEVN-IQANPAP--------EINWFRNESEIEHSQHHRLQFDDGSGNY 2400
Query: 81 -LWFVPAKVEDSGHYYCVVRN------SSYCLRIK----ISAKFVENEPNLCYNAQAIFK 129
L + A EDSG Y CV +N + C+RI+ +K ++ + Q
Sbjct: 2401 SLTIIDAYAEDSGEYKCVAKNKIGKAHTVCCVRIEELLSKRSKKIDGSKAPRFRMQLPTP 2580
Query: 130 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN---IHFSGVKDRLIVMNV 186
+++P D LVC P ++W KD KP+ + N H +GV L ++
Sbjct: 2581 REVPQGADLTLVCSV------SGTPHPNIKWTKDDKPIDMSNKQVRHENGV-CTLHIIGA 2739
Query: 187 AEKHRGNYTCHASYTY-LGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQ 245
+ +G Y C A + + + + + + E + + RP + P + G+++
Sbjct: 2740 RDDDQGRYVCEAENIHGVAQSFSVVEIKEAV---DKDHVRPKFLEPLVNCSTCE-GNEMV 2907
Query: 246 LICNVTGQLSDIAYWKWNG 264
L C VTG+ W +G
Sbjct: 2908 LECCVTGKPIPTITWYKDG 2964
Score = 42.0 bits (97), Expect = 0.16
Identities = 61/246 (24%), Positives = 95/246 (37%), Gaps = 21/246 (8%)
Frame = +1
Query: 44 CPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSY 103
C ++ H I W KDD +S +Q R L + A+ +D G Y C N
Sbjct: 2617 CSVSGTPHPN-IKWTKDDKPIDMSNKQV-RHENGVCTLHIIGARDDDQGRYVCEAENIHG 2790
Query: 104 CLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCP-YMEFFKN----ENNEL--- 155
AQ+ ++ A D V P ++E N E NE+
Sbjct: 2791 V-------------------AQSFSVVEIKEAVDKDHVRPKFLEPLVNCSTCEGNEMVLE 2913
Query: 156 --------PKLQWYKDCKPLLLDN--IHFSGVK--DRLIVMNVAEKHRGNYTCHASYTYL 203
P + WYKD L+++N + ++ K RL +MNV G YTC A L
Sbjct: 2914 CCVTGKPIPTITWYKDGLKLIIENRMLQYTDRKGVSRLNIMNVVMNDDGEYTCEA-VNSL 3090
Query: 204 GKQYP-ITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKW 262
GK + T + + L + + T S + +G +IQ VT L+D +
Sbjct: 3091 GKDFTHCTVKVVDMGLSKTRLTPVRSRSRSRSRSPSVVGGEIQRPPVVTRPLADATVTEG 3270
Query: 263 NGSVID 268
N +++
Sbjct: 3271 NRELLE 3288
Score = 38.5 bits (88), Expect = 1.8
Identities = 18/48 (37%), Positives = 26/48 (53%), Gaps = 4/48 (8%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKD----RLIVMNVAEKHRGNYTCHAS 199
PK+QWYKD K L + ++ + + L V N+ E G YTC A+
Sbjct: 1630 PKVQWYKDDKELTVPSMKYDSFYNEGLAELTVKNIVESDAGKYTCRAT 1773
>gb|U80022.2| Caenorhabditis elegans cosmid F12F3, complete sequence
Length = 36859
Score = 51.2 bits (121), Expect = 3e-04
Identities = 60/259 (23%), Positives = 103/259 (39%), Gaps = 16/259 (6%)
Frame = -3
Query: 22 KCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEK- 80
KC E + IL N I P P I W++++S+ S +
Sbjct: 7058 KCSESD---ILKLEVN-IQANPAP--------EINWFRNESEIEHSQHHRLQFDDGSGNY 6915
Query: 81 -LWFVPAKVEDSGHYYCVVRN------SSYCLRIK----ISAKFVENEPNLCYNAQAIFK 129
L + A EDSG Y CV +N + C+RI+ +K ++ + Q
Sbjct: 6914 SLTIIDAYAEDSGEYKCVAKNKIGKAHTVCCVRIEELLSKRSKKIDGSKAPRFRMQLPTP 6735
Query: 130 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN---IHFSGVKDRLIVMNV 186
+++P D LVC P ++W KD KP+ + N H +GV L ++
Sbjct: 6734 REVPQGADLTLVCSV------SGTPHPNIKWTKDDKPIDMSNKQVRHENGV-CTLHIIGA 6576
Query: 187 AEKHRGNYTCHASYTY-LGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQ 245
+ +G Y C A + + + + + + E + + RP + P + G+++
Sbjct: 6575 RDDDQGRYVCEAENIHGVAQSFSVVEIKEAV---DKDHVRPKFLEPLVNCSTCE-GNEMV 6408
Query: 246 LICNVTGQLSDIAYWKWNG 264
L C VTG+ W +G
Sbjct: 6407 LECCVTGKPIPTITWYKDG 6351
Score = 42.0 bits (97), Expect = 0.16
Identities = 61/246 (24%), Positives = 95/246 (37%), Gaps = 21/246 (8%)
Frame = -3
Query: 44 CPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSY 103
C ++ H I W KDD +S +Q R L + A+ +D G Y C N
Sbjct: 6698 CSVSGTPHPN-IKWTKDDKPIDMSNKQV-RHENGVCTLHIIGARDDDQGRYVCEAENIHG 6525
Query: 104 CLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCP-YMEFFKN----ENNEL--- 155
AQ+ ++ A D V P ++E N E NE+
Sbjct: 6524 V-------------------AQSFSVVEIKEAVDKDHVRPKFLEPLVNCSTCEGNEMVLE 6402
Query: 156 --------PKLQWYKDCKPLLLDN--IHFSGVK--DRLIVMNVAEKHRGNYTCHASYTYL 203
P + WYKD L+++N + ++ K RL +MNV G YTC A L
Sbjct: 6401 CCVTGKPIPTITWYKDGLKLIIENRMLQYTDRKGVSRLNIMNVVMNDDGEYTCEA-VNSL 6225
Query: 204 GKQYP-ITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKW 262
GK + T + + L + + T S + +G +IQ VT L+D +
Sbjct: 6224 GKDFTHCTVKVVDMGLSKTRLTPVRSRSRSRSRSPSVVGGEIQRPPVVTRPLADATVTEG 6045
Query: 263 NGSVID 268
N +++
Sbjct: 6044 NRELLE 6027
Score = 38.5 bits (88), Expect = 1.8
Identities = 18/48 (37%), Positives = 26/48 (53%), Gaps = 4/48 (8%)
Frame = -3
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKD----RLIVMNVAEKHRGNYTCHAS 199
PK+QWYKD K L + ++ + + L V N+ E G YTC A+
Sbjct: 7685 PKVQWYKDDKELTVPSMKYDSFYNEGLAELTVKNIVESDAGKYTCRAT 7542
>gb|AF181644.1|AF181644 Drosophila melanogaster BcDNA.GH11322 (BcDNA.GH11322) mRNA, complete
cds
Length = 2732
Score = 51.2 bits (121), Expect = 3e-04
Identities = 57/199 (28%), Positives = 79/199 (39%), Gaps = 6/199 (3%)
Frame = +3
Query: 56 TWYKDDSKTPVSTEQASRIHQHKE-KLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+WYKD + R + + L P + D G Y C VRNS L+ + +
Sbjct: 882 SWYKDGVLLQEVQDLVRRFYMGPDGSLSIDPTMMSDLGEYECKVRNSDGELQTAKAFLNI 1061
Query: 115 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
+ + + Y +F LP L C + N L L+W KD LL D+ +
Sbjct: 1062 QYKAKVIYAPPEVF---LPYGQPAVLDCHF-----RANPPLKNLRWEKD--GLLFDSYNV 1211
Query: 175 SGV----KDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS 230
GV L V E H G+YTC Y LG P + VI I L RP I S
Sbjct: 1212 PGVFYKMNGSLFFAKVDENHAGSYTC-TPYNDLGTDGP-SPVISVIVL------RPPIFS 1367
Query: 231 PANETMEVD-LGSQIQLIC 248
+ + + LG +L C
Sbjct: 1368 VTPKAIYIQKLGEAAELPC 1424
>gb|AC007278.3|AC007278 Homo sapiens BAC clone RP11-308G20 from 2, complete sequence
Length = 162508
Score = 50.8 bits (120), Expect = 3e-04
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Frame = -3
Query: 434 EDIVEVINENVKKSRRLIIILVRETSGFSWLGGSS--EEQIAMYNALVQDGIKVVLLELE 491
EDIV +I K+SRR I IL +++ G S E Q A+ AL +K++L++
Sbjct: 139310 EDIVSII----KRSRRGIFILSP-----NYVNGPSIFELQAAVNLALDDQTLKLILIKFC 139158
Query: 492 KIQDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQL 551
Q+ E +P +K + + W G + P S RFW +RYHMPV+ + +QL
Sbjct: 139157 YFQEPESLPHLVKKALRVLPTVTWRGLKSVPPNS---RFWAKMRYHMPVKNSQGFTWNQL 138987
>gb|U33058.1|CEU33058 Caenorhabditis elegans UNC-89 (unc-89) gene, complete cds
Length = 46638
Score = 50.4 bits (119), Expect = 5e-04
Identities = 66/301 (21%), Positives = 114/301 (36%), Gaps = 18/301 (5%)
Frame = +2
Query: 54 TITWYKDDSKTPVSTEQASRIHQHKE----KLWFVPAKVEDSGHYYCVVRNSSY------ 103
++ W+KDD TP+S + I + L A+ D G Y C RN +
Sbjct: 32705 SVEWFKDD--TPISIDNVHVIQKQTAVGSFSLTINDARQGDVGIYSCRARNEAGEALTTA 32878
Query: 104 ---CLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQW 160
+R I +F + L Q K+ V G +P ++W
Sbjct: 32879 NFGIIRDSIPPEFTQKLRPLEVREQETLDLKVTVIG----------------TPVPNVEW 33010
Query: 161 YKDCKPLLLDNIHFSGVKD-----RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEF 215
+KD KP+ +DN H G + L + + G YTC A+ + +
Sbjct: 33011 FKDDKPINIDNSHIFGKDEGSGHHTLTIKQARGEDVGVYTCKAT-----NEAGEAKTTAN 33175
Query: 216 ITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLG 275
+ ++E + P+ V + EV+ G +L+ V G+ W +G P+
Sbjct: 33176 MAVQE-EIEAPLFVQ-GLKPYEVEQGKPAELVVRVEGKPEPEVKWFKDGV------PIAI 33331
Query: 276 EDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQ 335
++ + +E TL+ I + + + +TC A N G D +L P +F+
Sbjct: 33332 DNQHVIEKKGENGSHTLV----IKDTNNADF-GKYTCQATNKAGKDETVGELKIPKYSFE 33496
Query: 336 K 336
K
Sbjct: 33497 K 33499
Score = 41.6 bits (96), Expect = 0.21
Identities = 49/228 (21%), Positives = 86/228 (37%), Gaps = 13/228 (5%)
Frame = +3
Query: 52 KGTITWYKDDSKT-PVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRN------SSYC 104
K ++ WYK+ + P + + ++L AK++D Y C N S
Sbjct: 34392 KPSVKWYKNGEELKPSDRVKIENLDDGTQRLTVTNAKLDDMDEYRCEASNEFGDVWSDVT 34571
Query: 105 LRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDC 164
L +K A+ P AI ++ A +F + P ++W+KD
Sbjct: 34572 LTVKEPAQVA---PGFFKELSAIQVKETETA----------KFECKVSGTKPDVKWFKDG 34712
Query: 165 KPLLLD-NIHFSGVKD---RLIVMNVAEKHRGNYTCHASYT--YLGKQYPITRVIEFITL 218
PL D +HF D RL++ + +GNY S + P+T V
Sbjct: 34713 TPLKEDKRVHFESTDDGTQRLVIEDSKTDDQGNYRIEVSNDAGVANSKVPLTVV------ 34874
Query: 219 EENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSV 266
P+ + + + V G++I L V G+ + ++K +V
Sbjct: 34875 ----PSETLKIKKGLTDVNVTQGTKILLSVEVEGKPKTVKWYKGTETV 35006
>ref|NM_011248.1| Mus musculus retinoblastoma inhibiting gene 1 (Rbig1), mRNA
Length = 5259
Score = 50.1 bits (118), Expect = 6e-04
Identities = 67/302 (22%), Positives = 111/302 (36%), Gaps = 19/302 (6%)
Frame = +2
Query: 37 NEIDVRPCPLN-----PNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDS 91
N++ + P+N + + + W KDD + P + H LW ED
Sbjct: 956 NQVVLADAPVNFLCEVQGDPQPNLHWRKDDGELPAGRYEIRSDHS----LWIDQVSSEDE 1123
Query: 92 GHYYCVVRNS------SYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYM 145
G Y CV NS S L + + +FV N Q + + C
Sbjct: 1124 GTYTCVAENSVGRAEASGSLSVHVPPQFVTKPQN----------QTVAPGANVSFQC--- 1264
Query: 146 EFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIV-----MNVAEKHRGN---YTCH 197
+ + N P + W K+ +LL RL+V +N+ E G+ Y C
Sbjct: 1265 ---ETKGNPPPAIFWQKEGSQVLLFPSQSLQPMGRLLVSPRGQLNITEVKIGDGGYYVCQ 1435
Query: 198 ASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDI 257
A I+ +++ P ++ PAN+T+ LGS + L C V G
Sbjct: 1436 AVSVAGSILAKALLEIKGASIDGLPPI--ILQGPANQTLV--LGSSVWLPCRVIGNPQPN 1603
Query: 258 AYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNT 317
WK + + DD + N + + + +I E++ FY +C AK++
Sbjct: 1604 IQWKKDERWLQGDD-----------SQFNLMDNGTLHIASIQEMDMGFY----SCVAKSS 1738
Query: 318 HG 319
G
Sbjct: 1739 IG 1744
>gb|AF060570.1|AF060570 Mus musculus rig-1 protein mRNA, complete cds
Length = 5259
Score = 50.1 bits (118), Expect = 6e-04
Identities = 67/302 (22%), Positives = 111/302 (36%), Gaps = 19/302 (6%)
Frame = +2
Query: 37 NEIDVRPCPLN-----PNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDS 91
N++ + P+N + + + W KDD + P + H LW ED
Sbjct: 956 NQVVLADAPVNFLCEVQGDPQPNLHWRKDDGELPAGRYEIRSDHS----LWIDQVSSEDE 1123
Query: 92 GHYYCVVRNS------SYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYM 145
G Y CV NS S L + + +FV N Q + + C
Sbjct: 1124 GTYTCVAENSVGRAEASGSLSVHVPPQFVTKPQN----------QTVAPGANVSFQC--- 1264
Query: 146 EFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIV-----MNVAEKHRGN---YTCH 197
+ + N P + W K+ +LL RL+V +N+ E G+ Y C
Sbjct: 1265 ---ETKGNPPPAIFWQKEGSQVLLFPSQSLQPMGRLLVSPRGQLNITEVKIGDGGYYVCQ 1435
Query: 198 ASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDI 257
A I+ +++ P ++ PAN+T+ LGS + L C V G
Sbjct: 1436 AVSVAGSILAKALLEIKGASIDGLPPI--ILQGPANQTLV--LGSSVWLPCRVIGNPQPN 1603
Query: 258 AYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNT 317
WK + + DD + N + + + +I E++ FY +C AK++
Sbjct: 1604 IQWKKDERWLQGDD-----------SQFNLMDNGTLHIASIQEMDMGFY----SCVAKSS 1738
Query: 318 HG 319
G
Sbjct: 1739 IG 1744
>ref|NM_017358.1| Rattus norvegicus immunoglobulin superfamily member (CDO), mRNA
Length = 4573
Score = 49.7 bits (117), Expect = 8e-04
Identities = 55/210 (26%), Positives = 86/210 (40%), Gaps = 4/210 (1%)
Frame = +3
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+ W KD +S R++ H PA DSG+Y CVV N+S K V
Sbjct: 783 VYWLKDGQDC-LSGSNWRRLYSHLATASIDPA---DSGNYSCVVGNNS-----SGDVKHV 935
Query: 115 ENEPNLCYNA---QAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN 171
N+ +A + + QK+ + C N P W+ + +P+ +
Sbjct: 936 TYTVNVLEHASISKGLHDQKVSLGATVRFTCEV------HGNPAPNRTWFHNAQPIRPSS 1097
Query: 172 IHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS- 230
H + L + V + G Y C A +G R + +E++ RPVIV+
Sbjct: 1098RHLTE-GSVLKITGVIMEDSGLYQCMAD-NGIGFMQSTGR----LQIEQDSGQRPVIVTA 1259
Query: 231 PANETMEVDLGSQIQLICNVTGQLSDIAYW 260
PAN +EV G + L CN TG+ + +W
Sbjct: 1260PAN--VEVTDGDFVTLSCNATGEPVPVIHW 1343
>gb|AF004840.1|AF004840 Rattus norvegicus CDO (cdo) mRNA, complete cds
Length = 4573
Score = 49.7 bits (117), Expect = 8e-04
Identities = 55/210 (26%), Positives = 86/210 (40%), Gaps = 4/210 (1%)
Frame = +3
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+ W KD +S R++ H PA DSG+Y CVV N+S K V
Sbjct: 783 VYWLKDGQDC-LSGSNWRRLYSHLATASIDPA---DSGNYSCVVGNNS-----SGDVKHV 935
Query: 115 ENEPNLCYNA---QAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN 171
N+ +A + + QK+ + C N P W+ + +P+ +
Sbjct: 936 TYTVNVLEHASISKGLHDQKVSLGATVRFTCEV------HGNPAPNRTWFHNAQPIRPSS 1097
Query: 172 IHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS- 230
H + L + V + G Y C A +G R + +E++ RPVIV+
Sbjct: 1098RHLTE-GSVLKITGVIMEDSGLYQCMAD-NGIGFMQSTGR----LQIEQDSGQRPVIVTA 1259
Query: 231 PANETMEVDLGSQIQLICNVTGQLSDIAYW 260
PAN +EV G + L CN TG+ + +W
Sbjct: 1260PAN--VEVTDGDFVTLSCNATGEPVPVIHW 1343
>gb|M24637.1|CHKCEK1 Chicken tyrosine kinase (cek1) mRNA, complete cds
Length = 2925
Score = 49.3 bits (116), Expect = 0.001
Identities = 56/227 (24%), Positives = 99/227 (42%), Gaps = 16/227 (7%)
Frame = +2
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTY--LGKQYP 208
P L+W K+ K D+ G K R +I+ +V +GNYTC Y + Y
Sbjct: 605 PTLRWLKNGKEFKPDH-RIGGYKVRYATWSIIMDSVVPSDKGNYTCIVENKYGSINHTYQ 781
Query: 209 ITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW----KW 262
+ V E P RP++ + PAN+T V LGS ++ +C V W +
Sbjct: 782 LDVV-------ERSPHRPILQAGLPANKT--VALGSNVEFVCKVYSDPQPHIQWLKHIEV 934
Query: 263 NGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGID- 321
NGS I D+ + + + ++ + N+S ++ Y TC A N+ GI
Sbjct: 935 NGSKIGPDNLPYVQILKTAGVNTTDKEMEVLHLRNVSFEDAGEY----TCLAGNSIGISH 1102
Query: 322 -AAYIQLIYPVTNFQKHMIGICVTLTVIIVCS-VFIYKIFKIDIVLW 366
+A++ ++ T M+ + L +II C+ F+ + ++++
Sbjct: 1103HSAWLTVL-EATEQSPAMMTSPLYLEIIIYCTGAFLISCMVVTVIIY 1240
>gb|AF202063.1|AF202063 Homo sapiens fibroblast growth factor receptor 4, soluble-form
splice variant (FGFR4) mRNA, complete cds
Length = 2418
Score = 49.3 bits (116), Expect = 0.001
Identities = 79/354 (22%), Positives = 130/354 (36%), Gaps = 63/354 (17%)
Frame = +1
Query: 30 IILVSSANEIDVRPC---PLNPNEHKGTIT-----------------WYKDDSKTPVSTE 69
++ + ++ E+++ PC L E + T+ WYK+ S+
Sbjct: 91 VLSLEASEEVELEPCLAPSLEQQEQELTVALGQPVRLCCGRAERGGHWYKEGSRLA---- 258
Query: 70 QASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRI-------KISAKFVENEPNL-- 120
A R+ + +L ED+G Y C+ R S L+ ++ + +P
Sbjct: 259 PAGRVRGWRGRLEIASFLPEDAGRYLCLARGSMIVLQNLTLITGDSSTSSNDDEDPKSHR 438
Query: 121 ------CYNAQAIF-------KQKLPVAGDGGLV---CPYMEFFKNENNELPKLQWYKDC 164
Y QA + ++KL G V CP N P ++W KD
Sbjct: 439 DLSNRHSYPQQAPYWTHPQRMEKKLHAVPAGNTVKFRCPAA------GNPTPTIRWLKDG 600
Query: 165 KPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLE 219
+ N G++ R L++ +V RG YTC +Y + +
Sbjct: 601 QAFHGGN-RIGGIRLRHQHWSLVMESVVPSDRGTYTCLVENAVGSIRYNY-----LLDVL 762
Query: 220 ENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW----KWNGSVIDEDDPV 273
E P RP++ + PAN T V GS ++L+C V W NGS D
Sbjct: 763 ERSPHRPILQAGLPANTTAVV--GSDVELLCKVYSDAQPHIQWLKHIVINGSSFGAD--- 927
Query: 274 LGEDYYSVENPANKRRSTLITVLNISEIESRFYKH-------PFTCFAKNTHGI 320
G Y V A+ +N SE+E + ++ +TC A N+ G+
Sbjct: 928 -GFPYVQVLKTAD---------INSSEVEVLYLRNVSAEDAGEYTCLAGNSIGL 1059
>emb|Z68328.1|HSU72E5 Human DNA sequence from cosmid cU72E5, between markers DXS366 and DXS87
on chromosome X
Length = 44443
Score = 49.3 bits (116), Expect = 0.001
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 8/127 (6%)
Frame = +1
Query: 437 VEVINENVKKSRRLIIILVRETSGFSWLGGSS--EEQIAMYNALVQDGIKVVLLELEKI- 493
+E + V++SRRLII+L T + G S E + ++N LV IKV+L+E ++
Sbjct: 12211 MEDLTRYVEQSRRLIIVL---TPDYILRRGWSIFELESRLHNMLVSGEIKVILIECTELK 12381
Query: 494 -----QDYEKMPESIKFIKQKHGAIRWSGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSK 548
Q+ E + SIK + I+W G + ++FWK++ Y MP++++ +
Sbjct: 12382 GKVNCQEVESLKRSIKLLS----LIKWKGSKSS---KLNSKFWKHLVYEMPIKKKEMLPR 12540
Query: 549 HQLLSPA 555
+L A
Sbjct: 12541 CHVLDSA 12561
Score = 49.3 bits (116), Expect = 0.001
Identities = 29/61 (47%), Positives = 35/61 (56%), Gaps = 5/61 (8%)
Frame = +2
Query: 374 FLPIKASDGKTYDAYILYPKTVGEGSTSDCDI-----FVFKVLPEVLEKQCGYKLFIYGR 428
F+ + D K YDAY+ Y K + T DCD F +VLP+VLEK GYKLFI R
Sbjct: 398 FVVLYV*DNKEYDAYLSYTKV--DQDTLDCDNPEEEQFALEVLPDVLEKHYGYKLFIPER 571
Query: 429 D 429
D
Sbjct: 572 D 574
>emb|X60184.1|MMST2G Mouse ST2 gene for growth-associated protein
Length = 9169
Score = 49.3 bits (116), Expect = 0.001
Identities = 21/50 (42%), Positives = 33/50 (66%)
Frame = +3
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYC 104
+ WY D+ + T++ +RI +++L F+PA+VEDSG Y CV+R YC
Sbjct: 2487 VEWYYSDTNESIPTQKRNRIFVSRDRLKFLPARVEDSGIYACVIRR--YC 2630
>ref|NM_013225.1| Rattus norvegicus contactin 6 (Cntn6), mRNA
Length = 3413
Score = 48.9 bits (115), Expect = 0.001
Identities = 55/226 (24%), Positives = 89/226 (39%), Gaps = 4/226 (1%)
Frame = +2
Query: 47 NPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLR 106
NPN + TW K+ + ++TE+ RI L V DSG Y C N +
Sbjct: 1217 NPNP---SYTWLKNGER--LNTEE--RIQTENGTLIITMLNVSDSGIYQCAAENKYQTIY 1375
Query: 107 IKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPK--LQWYKDC 164
+ + + P+ N + V GD + C + N PK + W +
Sbjct: 1376 ANAELRVLASAPDFSKNPIKKI-SVVQVGGDISIEC--------KPNAFPKASISWKRGT 1528
Query: 165 KPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPT 224
+ L F L + NV G+YTC A+ + + + +++
Sbjct: 1529 ENLKQSKRVFFLEDGSLKICNVTRSDAGSYTCVATNQFGNGKSSGSLIVK---------E 1681
Query: 225 RPVIVSPANETMEVDLGSQIQLICNVTGQ--LSDIAYWKWNGSVID 268
R VI P ++ M+V +G I L C V+ + + W +NG VID
Sbjct: 1682 RTVITVPPSK-MDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDVID 1816
>dbj|D87248.1|D87248 Rattus norvegicus mRNA for NB-3, complete cds
Length = 3413
Score = 48.9 bits (115), Expect = 0.001
Identities = 55/226 (24%), Positives = 89/226 (39%), Gaps = 4/226 (1%)
Frame = +2
Query: 47 NPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLR 106
NPN + TW K+ + ++TE+ RI L V DSG Y C N +
Sbjct: 1217 NPNP---SYTWLKNGER--LNTEE--RIQTENGTLIITMLNVSDSGIYQCAAENKYQTIY 1375
Query: 107 IKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPK--LQWYKDC 164
+ + + P+ N + V GD + C + N PK + W +
Sbjct: 1376 ANAELRVLASAPDFSKNPIKKI-SVVQVGGDISIEC--------KPNAFPKASISWKRGT 1528
Query: 165 KPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPT 224
+ L F L + NV G+YTC A+ + + + +++
Sbjct: 1529 ENLKQSKRVFFLEDGSLKICNVTRSDAGSYTCVATNQFGNGKSSGSLIVK---------E 1681
Query: 225 RPVIVSPANETMEVDLGSQIQLICNVTGQ--LSDIAYWKWNGSVID 268
R VI P ++ M+V +G I L C V+ + + W +NG VID
Sbjct: 1682 RTVITVPPSK-MDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDVID 1816
>gb|M35195.1|CHKCEK2 Chicken tyrosine kinase (cek2) mRNA, complete cds
Length = 3694
Score = 48.9 bits (115), Expect = 0.001
Identities = 71/303 (23%), Positives = 120/303 (39%), Gaps = 30/303 (9%)
Frame = +1
Query: 47 NPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSS---- 102
N ++ W+KD + ++R H ++ L + +DSG Y C R+S+
Sbjct: 334 NTQSSSVSVFWFKDG----IGIAPSNRTHIGQKLLKIINVSYDDSGLYSCKPRHSNEVLG 501
Query: 103 -YCLRIKISAKFVENEPN---------LCYNAQAIFKQKL---PVAGDGGLVCPYMEFFK 149
+ +R+ S ++E + + ++KL P A CP
Sbjct: 502 NFTVRVTDSPSSGDDEDDDDESEDTGVPFWTRPDKMEKKLLAVPAANTVRFRCPA----- 666
Query: 150 NENNELPKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTYLG 204
N P + W K+ K ++ G+K R L++ +V RGNYTC +
Sbjct: 667 -GGNPTPTIYWLKNGKEFKGEH-RIGGIKLRHQQWSLVMESVVPSDRGNYTC-----VVE 825
Query: 205 KQYPITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW-- 260
+Y R + + E P RP++ + PAN+T+ V GS ++ C V W
Sbjct: 826 NKYGNIRHTYQLDVLERSPHRPILQAGLPANQTVVV--GSNVEFHCKVYSDAQPHIQWLK 999
Query: 261 --KWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKH--PFTCFAKN 316
+ NGS D G Y +V A +T L I + + ++ +TC A N
Sbjct: 1000HVEVNGSKYGPD----GTPYVTVLKTAGV--NTTDKELEILYLRNVTFEDAGEYTCLAGN 1161
Query: 317 THG 319
+ G
Sbjct: 1162SIG 1170
>gb|AF176552.1|AF176552 Mus musculus fibroblast growth factor receptor 1-IIIb mRNA,
complete cds
Length = 2912
Score = 48.5 bits (114), Expect = 0.002
Identities = 61/232 (26%), Positives = 96/232 (41%), Gaps = 29/232 (12%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTY--LGKQYP 208
P L+W K+ K D+ G K R +I+ +V +GNYTC Y + Y
Sbjct: 340 PTLRWLKNGKEFKPDH-RIGGYKVRYATWSIIMDSVVPSDKGNYTCIVENEYGSINHTYQ 516
Query: 209 ITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW----KW 262
+ V E P RP++ + PAN+T V LGS ++ +C V W +
Sbjct: 517 LDVV-------ERSPHRPILQAGLPANKT--VALGSNVEFMCKVYSDPQPHIQWLKHIEV 669
Query: 263 NGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG--I 320
NGS I D+ L + N + ++T+ N++E +S Y C N G
Sbjct: 670 NGSKIGPDN--LPYVQILKHSGINSSDAEVLTLFNVTEAQSGEY----VCKVSNYIGEAN 831
Query: 321 DAAYIQLIYPVTNFQKHMIGICVT---LTVIIVC-----------SVFIYKI 358
+A++ + PV + + + L +II C SV IYK+
Sbjct: 832 QSAWLTVTRPVAKALEERPAVMTSPLYLEIIIYCTGAFLISCMLGSVIIYKM 987
>gb|S78201.1|S78201 Sheeppox virus strain KS-1 Q2/1L (Q2/1L) gene, partial cds; and
Q2/2L (Q2/2L) and Q2/3L (Q2/3L) genes, complete cds
Length = 2910
Score = 48.5 bits (114), Expect = 0.002
Identities = 65/313 (20%), Positives = 120/313 (37%), Gaps = 27/313 (8%)
Frame = +2
Query: 31 ILVSSANEIDVRPCP-LNPNEHKGTITWYKDDSKTPVST----------EQASRIHQHKE 79
++ + N ++ CP ++ + T+ W+ + V T + R++
Sbjct: 23 VMKTFENNSEIVKCPYVDTLNYNTTVKWFLVNYNKYVKTGDVKKSFHEFKNTDRVYSVGH 202
Query: 80 KLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGG 139
LW DSG Y C V NS+Y + + E + +
Sbjct: 203 SLWINNITKNDSGIYACNVHNSTYYFTSSVMLDVYKKE-----------TINSVIGTNYE 349
Query: 140 LVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHAS 199
L+C + F N N ++ W+KD + + +N + K++L++ N+++ G Y C +
Sbjct: 350 LLCINTKNFINTFNCSYEVNWFKD-REKINNNFKYKKSKEKLLIRNISKSDEGVYLCSIT 526
Query: 200 -------YTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLIC---- 248
K+Y VI+ + K + V+ N T + LG + C
Sbjct: 527 TDTRCNPKNLALKRYYHNNVIK----KRFKDDINLTVNFLNST--IALGKNFLMECIGES 688
Query: 249 -NVTGQLSDIAYWKWNG-SVIDED---DPVLGEDYYSVENPANKRRSTLITVLNISEIES 303
N+ +W NG +V+D D + LG + Y N + LI I E++
Sbjct: 689 KNIQRVYGSSIFWLINGVNVLDYDRSKNIYLGREMY----VGNSYKIALI----IKEVKR 844
Query: 304 RFYKHPFTCFAKN 316
++ FTC +N
Sbjct: 845 KYLSANFTCNLRN 883
>dbj|AB018299.1|AB018299 Homo sapiens mRNA for KIAA0756 protein, partial cds
Length = 4226
Score = 48.5 bits (114), Expect = 0.002
Identities = 54/237 (22%), Positives = 90/237 (37%), Gaps = 8/237 (3%)
Frame = +3
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNS------SYCLRIK 108
I WYK P ++ + L EDSG Y+C+ N + +R+K
Sbjct: 258 IAWYKKGGDLP---SDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVK 428
Query: 109 ISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPL- 167
+ +++ NL L DG LVC + N P +QW + +PL
Sbjct: 429 AAPYWLDEPKNLI----------LAPGEDGRLVC------RANGNPKPTVQWMVNGEPLQ 560
Query: 168 -LLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRP 226
N + D +I + R Y C+ S ++ F+++ + P
Sbjct: 561 SAPPNPNREVAGDTIIFRDTQISSRAVYQCNTS-----NEHGYLLANAFVSVLD---VPP 716
Query: 227 VIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVEN 283
++SP N+ + V L ++ +L C G W NG + D G +Y+ EN
Sbjct: 717 RMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLD----GGNYHVYEN 875
Score = 40.0 bits (92), Expect = 0.61
Identities = 38/164 (23%), Positives = 62/164 (37%)
Frame = +3
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEF 215
P + WYK L D F L + NV+E+ G Y C AS ++ I+ ++
Sbjct: 252 PDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 431
Query: 216 ITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLG 275
++P + +I++P G +L+C G W NG + P
Sbjct: 432 APYWLDEP-KNLILAP---------GEDGRLVCRANGNPKPTVQWMVNGEPLQSAPP--- 572
Query: 276 EDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 319
NP N+ + + ++I SR + C N HG
Sbjct: 573 -------NP-NREVAGDTIIFRDTQISSRAV---YQCNTSNEHG 671
>emb|X65059.1|PWFGFR4 P.waltlii mRNA for fibroblast growth factor receptor (FGFR-4)
Length = 3468
Score = 48.5 bits (114), Expect = 0.002
Identities = 86/354 (24%), Positives = 129/354 (36%), Gaps = 58/354 (16%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLR---IKI-- 109
+ WY + ++ + RI L EDSG Y CVV + + LR I +
Sbjct: 292 VNWYTESTRL----QHGGRIRLTDTVLEIADVTYEDSGLYLCVVPGTGHILRNFTISVVD 459
Query: 110 ----------------SAKFVENEPNLCYNAQAIF-------KQKLPVAGDGGLV---CP 143
SA + +P + +A F +KL G V CP
Sbjct: 460 SLASGDDDDEDHGREDSAGDMGEDPPYSTSYRAPFWSQPQRMDKKLYAVPAGNTVKFRCP 639
Query: 144 YMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTC-- 196
+ N P ++W K+ + ++ G++ R L++ +V RGNYTC
Sbjct: 640 ------SAGNPTPGIRWLKNGREFGGEH-RIGGIRLRHQHWSLVMESVVPSDRGNYTCLV 798
Query: 197 -----HASYTYLGKQYPITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICN 249
SY+YL + + E P RP++ + PAN T LGS +Q C
Sbjct: 799 ENKFGSISYSYL------------LDVLERSPHRPILQAGLPANTTAM--LGSDVQFFCK 936
Query: 250 VTGQLSDIAYW----KWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRF 305
V W + NGS D G + V A+ +N SE+E
Sbjct: 937 VYSDAQPHIQWLKHIEVNGSRYGPD----GVPFVQVLKTAD---------INSSEVEV-L 1074
Query: 306 YKH--------PFTCFAKNTHGIDAAYIQL-IYPVTNFQKHMIGICVTLTVIIV 350
Y H +TC A N+ G+ L + P +F K G T II+
Sbjct: 1075YLHNVSFEDAGEYTCLAGNSIGLSYQSAWLTVLPEEDFAKEAEGPETRYTDIII 1236
>gb|U81037.1|RNU81037 Rattus norvegicus ankyrin binding cell adhesion molecule NrCAM
(NrCAM) mRNA, alternatively spliced form, partial cds
Length = 4044
Score = 48.5 bits (114), Expect = 0.002
Identities = 66/270 (24%), Positives = 101/270 (36%), Gaps = 4/270 (1%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
I W K+D PV+ + K+ L + DSG+Y C+ +N+ + IS V
Sbjct: 907 IYWIKEDGTLPVNR---TFYRNFKKTLQIIHVSEADSGNYQCIAKNALGAVHHTISVT-V 1074
Query: 115 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKP--LLLDNI 172
+ P Y A L +G L+C + N P++ W + P + LD+
Sbjct: 1075 KAAP---YWIVAPHNLVLSPGENGTLIC------RANGNPKPRISWLTNGVPVEIALDDP 1227
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA 232
D ++ NV E Y C+AS Y Y + + E P I++ A
Sbjct: 1228 SRKIDGDTIMFSNVQESSSAVYQCNASNKY---GYLLANAFVNVLAEP-----PRILTSA 1383
Query: 233 NETMEVDLGSQIQLICNVTGQLSDIAYW--KWNGSVIDEDDPVLGEDYYSVENPANKRRS 290
N +V L C G W GS + ED VL D ++E P ++ S
Sbjct: 1384 NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALHEDIYVL-HDNGTLEIPVAQKDS 1560
Query: 291 TLITVLNISEIESRFYKHPFTCFAKNTHGI 320
T +TC A+N G+
Sbjct: 1561 T----------------GTYTCVARNKLGM 1602
Score = 41.2 bits (95), Expect = 0.27
Identities = 38/164 (23%), Positives = 63/164 (38%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEF 215
P + W K+ L ++ + K L +++V+E GNY C A + I+ +
Sbjct: 901 PVIYWIKEDGTLPVNRTFYRNFKKTLQIIHVSEADSGNYQCIAKNALGAVHHTISVTV-- 1074
Query: 216 ITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLG 275
K IV+P N + + G LIC G W NG ++
Sbjct: 1075 ------KAAPYWIVAPHN--LVLSPGENGTLICRANGNPKPRISWLTNGVPVE------- 1209
Query: 276 EDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 319
++++P+ K I N+ E S Y+ C A N +G
Sbjct: 1210 ---IALDDPSRKIDGDTIMFSNVQESSSAVYQ----CNASNKYG 1320
>gb|AF336128.1|AF336128S1 Lumpy skin disease virus strain Neethling, 5' partial sequence
Length = 12518
Score = 48.5 bits (114), Expect = 0.002
Identities = 67/322 (20%), Positives = 123/322 (37%), Gaps = 27/322 (8%)
Frame = -3
Query: 31 ILVSSANEIDVRPCP-LNPNEHKGTITWYKDDSKTPVST----------EQASRIHQHKE 79
++ + N ++ CP ++ + T+ W+ + V T + R++
Sbjct: 4896 VMKTFENNSEIVKCPYVDTLNYNTTVKWFLVNYNEYVKTGDVKKSFHEFKNTDRVYSVGH 4717
Query: 80 KLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGG 139
LW DSG Y C V NS+Y + + E + +
Sbjct: 4716 SLWINNITKNDSGIYACNVHNSTYYFTSSVMLDIYKKE-----------TINSVIGTNYE 4570
Query: 140 LVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHAS 199
L+C + F N N ++ W KD + + +N + K++L++ N+++ G Y C +
Sbjct: 4569 LLCINTKNFINTFNCSYEVNWVKD-REKINNNFKYKKSKEKLLIRNISKSDEGVYLCSIT 4393
Query: 200 -------YTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLIC---- 248
K+Y VI+ + K + V+ N T + LG + C
Sbjct: 4392 TATRCNPKNLALKRYYHNNVIK----KRFKDDINLTVNFLNST--IALGKNFLMECIGES 4231
Query: 249 -NVTGQLSDIAYWKWNG-SVIDED---DPVLGEDYYSVENPANKRRSTLITVLNISEIES 303
N+ +W NG +V+D D + LG + Y N + LI I E++
Sbjct: 4230 KNIQRVYRSSIFWLINGVNVLDYDRSKNIYLGREMY----VGNSYKIALI----IKEVKR 4075
Query: 304 RFYKHPFTCFAKNTHGIDAAYI 325
++ FTC N H ++ Y+
Sbjct: 4074 KYLSANFTC---NLHNLEYNYL 4018
>gb|AF157560.1|AF157560 Danio rerio fibroblast growth factor receptor 3 (fgfr3) mRNA,
complete cds
Length = 3002
Score = 48.1 bits (113), Expect = 0.002
Identities = 77/353 (21%), Positives = 134/353 (37%), Gaps = 45/353 (12%)
Frame = +1
Query: 48 PNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRI 107
P + I W KD VS+ +R+ Q + L + EDSG Y C + S L
Sbjct: 718 PQDFLLPIVWQKDGDA--VSSSNRTRVGQ--KALRIINVSYEDSGVYSCRHAHKSMLLS- 882
Query: 108 KISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNEL------------ 155
+ K +++ L + + AG+G PY +L
Sbjct: 883 NYTVKVIDS---LSSGDDEDYDEDEDEAGNGNAEAPYWTRSDRMEKKLLAVPAANTVKFR 1053
Query: 156 --------PKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTY 202
P + W K+ K + G+K R L++ + RGNYTC Y
Sbjct: 1054 CPAAGNPTPSIHWLKNGKEFKGEQ-RMGGIKLRHQQWSLVMESAVPSDRGNYTCVVQNKY 1230
Query: 203 LGKQYPITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW 260
++ + + E P RP++ + PAN+T+ V GS ++ C V W
Sbjct: 1231 GSIKHTYQ-----LDVLERSPHRPILQAGLPANQTVVV--GSDVEFHCKVYSDAQPHIQW 1389
Query: 261 KWNGSVIDEDDPVLGEDYYSVENPA----NKRRSTLITVLNISEIESRFYKHPFTCFAKN 316
+ V G Y +V A + ++ + N+S ++ Y TC A N
Sbjct: 1390 LKHIEVNGSQYGPNGAPYVNVLKTAGINTTDKELEILYLTNVSFEDAGQY----TCLAGN 1557
Query: 317 THGID--AAYIQLIYPVTNFQKH--------MIGICV----TLTVIIVCSVFI 355
+ G + +A++ ++ P ++ + CV T+ +II+C ++I
Sbjct: 1558 SIGYNHHSAWLTVL-PAVEMEREDDYADILIYVTSCVLFILTMVIIILCRMWI 1713
>ref|NM_058889.1| immunoglobin-like protein
Length = 19929
Score = 48.1 bits (113), Expect = 0.002
Identities = 65/301 (21%), Positives = 113/301 (36%), Gaps = 18/301 (5%)
Frame = +1
Query: 54 TITWYKDDSKTPVSTEQASRIHQHKE----KLWFVPAKVEDSGHYYCVVRNSSY------ 103
++ W+KDD TP+S + I + L A+ D G Y C RN +
Sbjct: 10270 SVEWFKDD--TPISIDNVHVIQKQTAVGSFSLTINDARQGDVGIYSCRARNEAGEALTTA 10443
Query: 104 ---CLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQW 160
+R I +F + L Q K+ V G +P ++W
Sbjct: 10444 NFGIIRDSIPPEFTQKLRPLEVREQETLDLKVTVIG----------------TPVPNVEW 10575
Query: 161 YKDCKPLLLDNIHFSGVKD-----RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEF 215
+KD KP+ +DN H + L + + G YTC A+ + +
Sbjct: 10576 FKDDKPINIDNSHIFAKDEGSGHHTLTIKQARGEDVGVYTCKAT-----NEAGEAKTTAN 10740
Query: 216 ITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLG 275
+ ++E + P+ V + EV+ G +L+ V G+ W +G P+
Sbjct: 10741 MAVQE-EIEAPLFVQ-GLKPYEVEQGKPAELVVRVEGKPEPEVKWFKDGV------PIAI 10896
Query: 276 EDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQ 335
++ + +E TL+ I + + + +TC A N G D +L P +F+
Sbjct: 10897 DNQHVIEKKGENGSHTLV----IKDTNNADF-GKYTCQATNKAGKDETVGELKIPKYSFE 11061
Query: 336 K 336
K
Sbjct: 11062 K 11064
Score = 41.6 bits (96), Expect = 0.21
Identities = 49/228 (21%), Positives = 86/228 (37%), Gaps = 13/228 (5%)
Frame = +1
Query: 52 KGTITWYKDDSKT-PVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRN------SSYC 104
K ++ WYK+ + P + + ++L AK++D Y C N S
Sbjct: 11872 KPSVKWYKNGEELKPSDRVKIENLDDGTQRLTVTNAKLDDMDEYRCEASNEFGDVWSDVT 12051
Query: 105 LRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDC 164
L +K A+ P AI ++ A +F + P ++W+KD
Sbjct: 12052 LTVKEPAQVA---PGFFKELSAIQVKETETA----------KFECKVSGTKPDVKWFKDG 12192
Query: 165 KPLLLD-NIHFSGVKD---RLIVMNVAEKHRGNYTCHASYT--YLGKQYPITRVIEFITL 218
PL D +HF D RL++ + +GNY S + P+T V
Sbjct: 12193 TPLKEDKRVHFESTDDGTQRLVIEDSKTDDQGNYRIEVSNDAGVANSKVPLTVV------ 12354
Query: 219 EENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSV 266
P+ + + + V G++I L V G+ + ++K +V
Sbjct: 12355 ----PSETLKIKKGLTDVNVTQGTKILLSVEVEGKPKTVKWYKGTETV 12486
>gb|AF003131.1| Caenorhabditis elegans cosmid C09D1, complete sequence
Length = 53848
Score = 48.1 bits (113), Expect = 0.002
Identities = 65/301 (21%), Positives = 113/301 (36%), Gaps = 18/301 (5%)
Frame = +1
Query: 54 TITWYKDDSKTPVSTEQASRIHQHKE----KLWFVPAKVEDSGHYYCVVRNSSY------ 103
++ W+KDD TP+S + I + L A+ D G Y C RN +
Sbjct: 38614 SVEWFKDD--TPISIDNVHVIQKQTAVGSFSLTINDARQGDVGIYSCRARNEAGEALTTA 38787
Query: 104 ---CLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQW 160
+R I +F + L Q K+ V G +P ++W
Sbjct: 38788 NFGIIRDSIPPEFTQKLRPLEVREQETLDLKVTVIG----------------TPVPNVEW 38919
Query: 161 YKDCKPLLLDNIHFSGVKD-----RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEF 215
+KD KP+ +DN H + L + + G YTC A+ + +
Sbjct: 38920 FKDDKPINIDNSHIFAKDEGSGHHTLTIKQARGEDVGVYTCKAT-----NEAGEAKTTAN 39084
Query: 216 ITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLG 275
+ ++E + P+ V + EV+ G +L+ V G+ W +G P+
Sbjct: 39085 MAVQE-EIEAPLFVQ-GLKPYEVEQGKPAELVVRVEGKPEPEVKWFKDGV------PIAI 39240
Query: 276 EDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQ 335
++ + +E TL+ I + + + +TC A N G D +L P +F+
Sbjct: 39241 DNQHVIEKKGENGSHTLV----IKDTNNADF-GKYTCQATNKAGKDETVGELKIPKYSFE 39405
Query: 336 K 336
K
Sbjct: 39406 K 39408
Score = 41.6 bits (96), Expect = 0.21
Identities = 49/228 (21%), Positives = 86/228 (37%), Gaps = 13/228 (5%)
Frame = +2
Query: 52 KGTITWYKDDSKT-PVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRN------SSYC 104
K ++ WYK+ + P + + ++L AK++D Y C N S
Sbjct: 40301 KPSVKWYKNGEELKPSDRVKIENLDDGTQRLTVTNAKLDDMDEYRCEASNEFGDVWSDVT 40480
Query: 105 LRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDC 164
L +K A+ P AI ++ A +F + P ++W+KD
Sbjct: 40481 LTVKEPAQVA---PGFFKELSAIQVKETETA----------KFECKVSGTKPDVKWFKDG 40621
Query: 165 KPLLLD-NIHFSGVKD---RLIVMNVAEKHRGNYTCHASYT--YLGKQYPITRVIEFITL 218
PL D +HF D RL++ + +GNY S + P+T V
Sbjct: 40622 TPLKEDKRVHFESTDDGTQRLVIEDSKTDDQGNYRIEVSNDAGVANSKVPLTVV------ 40783
Query: 219 EENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSV 266
P+ + + + V G++I L V G+ + ++K +V
Sbjct: 40784 ----PSETLKIKKGLTDVNVTQGTKILLSVEVEGKPKTVKWYKGTETV 40915
>gb|AC008182.2|AC008182 Drosophila melanogaster, chromosome 2L, region 29F6-30A4, BAC clone
BACR48E15, complete sequence
Length = 192350
Score = 47.8 bits (112), Expect = 0.003
Identities = 38/147 (25%), Positives = 75/147 (50%), Gaps = 3/147 (2%)
Frame = -2
Query: 347 VIIVCSVFIYKIFKIDIVLWY--RDSCYDFLPIKASD-GKTYDAYILYPKTVGEGSTSDC 403
+II S+ ++ F+ I++W+ + C + D K YDA++ + T
Sbjct: 81610 LIIALSINVFICFRQPIMIWFYEHEICLSLAARRELDEDKKYDAFLSF--------THKD 81455
Query: 404 DIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSW 463
+ + + + + + ++L Y RD VGE I + IN++VK SRR+II++ + +W
Sbjct: 81454 EDLIEEFVDRLENGRHKFRLCFYLRDWLVGESIPDCINQSVKGSRRIIILMTKNFLKSTW 81275
Query: 464 LGGSSEEQIAMYNALVQDGIKVVLLEL 490
G E ++A++ A +D K +++ L
Sbjct: 81274 --GRLEFRLALH-ATSRDRCKRLIVVL 81203
>gb|AE003623.1|AE003623 Drosophila melanogaster genomic scaffold 142000013386055 section 16 of
63, complete sequence
Length = 267547
Score = 47.8 bits (112), Expect = 0.003
Identities = 38/147 (25%), Positives = 75/147 (50%), Gaps = 3/147 (2%)
Frame = +2
Query: 347 VIIVCSVFIYKIFKIDIVLWY--RDSCYDFLPIKASD-GKTYDAYILYPKTVGEGSTSDC 403
+II S+ ++ F+ I++W+ + C + D K YDA++ + T
Sbjct: 156236 LIIALSINVFICFRQPIMIWFYEHEICLSLAARRELDEDKKYDAFLSF--------THKD 156391
Query: 404 DIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSW 463
+ + + + + + ++L Y RD VGE I + IN++VK SRR+II++ + +W
Sbjct: 156392 EDLIEEFVDRLENGRHKFRLCFYLRDWLVGESIPDCINQSVKGSRRIIILMTKNFLKSTW 156571
Query: 464 LGGSSEEQIAMYNALVQDGIKVVLLEL 490
G E ++A++ A +D K +++ L
Sbjct: 156572 --GRLEFRLALH-ATSRDRCKRLIVVL 156643
>gb|AC087076.1|AC087076 Caenorhabditis briggsae cosmid CB032N22, complete sequence
Length = 83495
Score = 47.8 bits (112), Expect = 0.003
Identities = 66/300 (22%), Positives = 112/300 (37%), Gaps = 18/300 (6%)
Frame = -1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKE----KLWFVPAKVEDSGHYYCVVRNSSY------- 103
+ W+KDD TP++ + I + L A+ D G Y C RN +
Sbjct: 2639 VEWFKDD--TPINIDNVHVIQKQTAVGSFSLTINDARQGDVGIYSCRARNEAGEALTTAN 2466
Query: 104 --CLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWY 161
+R I +F + L Q K+ V G P ++W+
Sbjct: 2465 FGIIRDSIPPEFTQKLRPLEVREQETLDLKVTVIG----------------TPAPNVEWF 2334
Query: 162 KDCKPLLLDNIHFSGVKD-----RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFI 216
KD KP+ +DN H + L + + G YTC A+ + + +
Sbjct: 2333 KDDKPINIDNAHIFAKDEGSGHHTLTIKQARGEDVGVYTCKAT-----NEAGEAKTTANM 2169
Query: 217 TLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGE 276
++E + P+ V + EV+ G ++L V G+ W +G+ P+ +
Sbjct: 2168 AVQE-EIEAPLFVQ-GLKPYEVEQGKPVELEVRVEGKPEPEVKWFKDGA------PIAID 2013
Query: 277 DYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNFQK 336
+ + +E TLI I + S + +TC A N G D +L P +F+K
Sbjct: 2012 NKHVIEKKGENGSHTLI----IKDTNSADF-GKYTCQATNKAGKDETIGELKVPKYSFEK 1848
>ref|XM_078936.1| Toll-4, mRNA
Length = 2432
Score = 47.8 bits (112), Expect = 0.003
Identities = 38/147 (25%), Positives = 75/147 (50%), Gaps = 3/147 (2%)
Frame = +3
Query: 347 VIIVCSVFIYKIFKIDIVLWY--RDSCYDFLPIKASD-GKTYDAYILYPKTVGEGSTSDC 403
+II S+ ++ F+ I++W+ + C + D K YDA++ + T
Sbjct: 1854 LIIALSINVFICFRQPIMIWFYEHEICLSLAARRELDEDKKYDAFLSF--------THKD 2009
Query: 404 DIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSW 463
+ + + + + + ++L Y RD VGE I + IN++VK SRR+II++ + +W
Sbjct: 2010 EDLIEEFVDRLENGRHKFRLCFYLRDWLVGESIPDCINQSVKGSRRIIILMTKNFLKSTW 2189
Query: 464 LGGSSEEQIAMYNALVQDGIKVVLLEL 490
G E ++A++ A +D K +++ L
Sbjct: 2190 --GRLEFRLALH-ATSRDRCKRLIVVL 2261
>gb|AF247768.1|AF247768 Drosophila melanogaster Toll-4 mRNA, partial cds
Length = 2432
Score = 47.8 bits (112), Expect = 0.003
Identities = 38/147 (25%), Positives = 75/147 (50%), Gaps = 3/147 (2%)
Frame = +3
Query: 347 VIIVCSVFIYKIFKIDIVLWY--RDSCYDFLPIKASD-GKTYDAYILYPKTVGEGSTSDC 403
+II S+ ++ F+ I++W+ + C + D K YDA++ + T
Sbjct: 1854 LIIALSINVFICFRQPIMIWFYEHEICLSLAARRELDEDKKYDAFLSF--------THKD 2009
Query: 404 DIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSW 463
+ + + + + + ++L Y RD VGE I + IN++VK SRR+II++ + +W
Sbjct: 2010 EDLIEEFVDRLENGRDKFRLCFYLRDWLVGESIPDCINQSVKGSRRIIILMTKNFLKSTW 2189
Query: 464 LGGSSEEQIAMYNALVQDGIKVVLLEL 490
G E ++A++ A +D K +++ L
Sbjct: 2190 --GRLEFRLALH-ATSRDRCKRLIVVL 2261
>ref|NM_077234.1| IG (immunoglobulin) superfamily (47 domains)
Length = 15597
Score = 47.8 bits (112), Expect = 0.003
Identities = 71/310 (22%), Positives = 120/310 (37%), Gaps = 12/310 (3%)
Frame = +1
Query: 55 ITWYKDD---SKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISA 111
+ W KD ++ + + +I +K+ F+ A+ DSG Y C+VRN + R K+
Sbjct: 7801 VEWQKDGLTINQDTLRGDSFIQIPSSGKKMSFLSARKSDSGRYTCIVRNPAGEAR-KLFD 7977
Query: 112 KFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKN---ENNELPKLQWYKDCKPLL 168
V + P++ + Q + PY N + PK+ W D KPL
Sbjct: 7978 FAVNDPPSISDELSSANIQ---------TIVPYYPVEINCVVSGSPHPKVYWLFDDKPLE 8130
Query: 169 LDNIHF--SGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRP 226
D+ + + + L ++ +H G YTC A +GK +F+ + T P
Sbjct: 8131 PDSAAYELTNNGETLKIVRSQVEHAGTYTCEAQ-NNVGKARK-----DFLV----RVTAP 8280
Query: 227 VIVSPANETMEVDLGSQIQLICNVTGQLS-DIAYWKWNGSVIDEDDPVLGEDYYSVENPA 285
E + +G + L CN + YW + + + V+ Y + E
Sbjct: 8281 PHFEKEREEVVARVGDTMLLTCNAESSVPLSSVYWHAHDESV--QNGVITSKYAANEKTL 8454
Query: 286 NKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNF---QKHMIGIC 342
N V NI + FY C A N GI + +LI T + Q+ + I
Sbjct: 8455 N--------VTNIQLDDEGFY----YCTAVNEAGITKKFFKLIVIETPYFLDQQKLYPII 8598
Query: 343 VTLTVIIVCS 352
+ + + CS
Sbjct: 8599 LGKRLTLDCS 8628
Score = 47.4 bits (111), Expect = 0.004
Identities = 61/251 (24%), Positives = 95/251 (37%), Gaps = 21/251 (8%)
Frame = +1
Query: 44 CPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNS-- 101
CP+ N I+WY +D K + + + + K KL AK+ DSG Y CV RN+
Sbjct: 4429 CPVFSNPLP-QISWYLND-KPLIDDKTSWKTSDDKRKLHVFKAKITDSGVYKCVARNAAG 4602
Query: 102 ----SYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPK 157
S+ + + + E++ Y + K+ V L CP F +P+
Sbjct: 4603 EGSKSFQVEVIVPLNLDESK----YKKKVFAKEGEEVT----LGCPVSGF------PVPQ 4740
Query: 158 LQWY---------KDCKPLLLDN----IHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLG 204
+ W K K L N +HF +V+ K GNY C A
Sbjct: 4741 INWVVDGTVVEPGKKYKGATLSNDGLTLHFD---------SVSVKQEGNYHCVAQSKG-- 4887
Query: 205 KQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKW-- 262
+ ++ V + ++ +EV LG I L C++ + D + W
Sbjct: 4888 ---------NILDIDVELSVLAVPIVGEDDNLEVFLGKDISLSCDLQTESDDKTTFVWSI 5040
Query: 263 NGSVIDEDDPV 273
NGS D D V
Sbjct: 5041 NGSESDRPDNV 5073
Score = 47.4 bits (111), Expect = 0.004
Identities = 67/306 (21%), Positives = 114/306 (36%), Gaps = 22/306 (7%)
Frame = +1
Query: 149 KNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYP 208
K + + P + W K +P +DNI S D L+++ G YTC A+ +Y +
Sbjct: 9964 KIDGHPKPTISWLKGGRPFNMDNIILSPRGDTLMILKAQRFDGGLYTCVATNSYGDSEQ- 10140
Query: 209 ITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVID 268
+ N T+P I ++T + G +I L C V G + WK
Sbjct: 10141 --------DFKVNVYTKPYIDETIDQTPKAVAGGEIILKCPVLGNPTPTVTWKRG----- 10281
Query: 269 EDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG-IDAAYIQL 327
DD V + +++ N + + +++ T ++C A N G + Y
Sbjct: 10282 -DDAVPNDSRHTIVNNYDLKINSVTTE----------DAGQYSCIAVNEAGNLTTHYAAE 10428
Query: 328 IYPVTNFQK---HMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDS----CYDFLPI--- 377
+ F + ++ + T+ + C V + I W+R YD I
Sbjct: 10429 VIGKPTFVRKGGNLYEVIENDTITMDCGVTSRPLPSIS---WFRGDKPVYLYDRYSISPD 10599
Query: 378 ---------KASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQ--CGYKLFIY 426
K SDG Y + E TSD D+ + ++P ++K G L I
Sbjct: 10600 GSHITINKAKLSDGGKYIC-----RASNEAGTSDIDLILKILVPPKIDKSNIIGNPLAIV 10764
Query: 427 GRDDYV 432
R Y+
Sbjct: 10765 ARTIYL 10782
Score = 43.9 bits (102), Expect = 0.042
Identities = 56/244 (22%), Positives = 85/244 (33%)
Frame = +1
Query: 31 ILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVED 90
I+ + EI R + P E I+W+ D P+ Q L K
Sbjct: 9139 IVADTTLEIPCRTEGIPPPE----ISWFLDGK--PILEMPGVTYKQGDLSLRIDNIKPNQ 9300
Query: 91 SGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKN 150
G Y CV N + R + +EP A + + +G E F N
Sbjct: 9301 EGRYTCVAENKAG--RAEQDTYVEISEPPRVVMASEVMR-----VVEGRQTTIRCEVFGN 9459
Query: 151 ENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPIT 210
P + W KD +P D + FS L + G YTC A+
Sbjct: 9460 PE---PVVNWLKDGEPYTSDLLQFSTKLSYLHLRETTLADGGTYTCIAT----------N 9600
Query: 211 RVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDED 270
+ E T + + P + ++ G+ + C VTG+ WK NG I++
Sbjct: 9601 KAGESQTTTDVEVLVPPRIEDEERVLQGKEGNTYMVHCQVTGRPVPYVTWKRNGKEIEQF 9780
Query: 271 DPVL 274
+PVL
Sbjct: 9781 NPVL 9792
Score = 41.6 bits (96), Expect = 0.21
Identities = 37/165 (22%), Positives = 70/165 (42%), Gaps = 2/165 (1%)
Frame = +1
Query: 157 KLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYT--YLGKQYPITRVIE 214
++ W K PL ++ F+ RL ++N H YTC A+ T + K + + V++
Sbjct: 5566 QITWMKQGLPLTENDAIFTLDNTRLTILNANRDHEDIYTCVANNTAGQVSKDFDV--VVQ 5739
Query: 215 FITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVL 274
+ +N A T+E++ G +I L C+ G + A W +N + ++ +
Sbjct: 5740 VLPKIKN----------AVVTLEINEGEEIILTCDAEGNPTPTAKWDFNQGDLPKEAVFV 5889
Query: 275 GEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 319
++ V N N+++ + YK C+A N G
Sbjct: 5890 NNNHTVVVN-------------NVTKYHTGVYK----CYATNKVG 5973
Score = 40.0 bits (92), Expect = 0.61
Identities = 44/195 (22%), Positives = 77/195 (38%), Gaps = 6/195 (3%)
Frame = +1
Query: 81 LWFVPAKVEDSGHYYCVVRNSSYCLRIKI-----SAKFVENEPNLCYNAQAIFKQKLPVA 135
L F V+ G+Y+CV ++ L I + + V + NL +F K
Sbjct: 4822 LHFDSVSVKQEGNYHCVAQSKGNILDIDVELSVLAVPIVGEDDNL-----EVFLGK---- 4974
Query: 136 GDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYT 195
D L C ++ + + + +P DN+ RL + + ++ G Y
Sbjct: 4975 -DISLSCDLQTESDDKTTFVWSINGSESDRP---DNVQIPSDGHRLYITDAKPENNGKYM 5142
Query: 196 CHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQ-IQLICNVTGQL 254
C + + + +TL+ +P PV V P E + +G+ I L C VTG
Sbjct: 5143 CRVTNS-------AGKAERTLTLDVLEP--PVFVEPVFEANQKLIGNNPIILQCQVTGNP 5295
Query: 255 SDIAYWKWNGSVIDE 269
WK +G+ +D+
Sbjct: 5296 KPTVIWKIDGNDVDK 5340
Score = 37.7 bits (86), Expect = 3.0
Identities = 38/164 (23%), Positives = 72/164 (43%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEF 215
PK++W+K+ K L+ + + + +L +M ++ G Y+C GK + +
Sbjct: 2194 PKIRWFKNGKDLIKPDDYIKINEGQLHIMGAKDEDAGAYSC-VGENMAGKDVQVANL--- 2361
Query: 216 ITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLG 275
PT +I SP T+ V++ Q+ L C G W+ G+V+
Sbjct: 2362 --SVGRVPT--IIESP--HTVRVNIERQVTLQCLAVGIPPPEIEWQ-KGNVL-------- 2496
Query: 276 EDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 319
++ NP + + ++ ++IE + FTC A+NT+G
Sbjct: 2497 --LATLNNPRYTQLADGNLLITDAQIED---QGQFTCIARNTYG 2613
Score = 37.7 bits (86), Expect = 3.0
Identities = 49/224 (21%), Positives = 82/224 (35%), Gaps = 11/224 (4%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRN----SSYCLRIKIS 110
++W KD I KL A +E++G Y C+ N +S +++I
Sbjct: 11110 VSWTKDSRALDGDLTDNVDISDDGRKLTISQASLENAGLYTCIALNRAGEASLEFKVEIL 11289
Query: 111 AKFV------ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDC 164
+ V + +P + N I + V G + P ++W K+
Sbjct: 11290 SPPVIDISRNDVQPQVAVNQPTI--MRCAVTG----------------HPFPSIKWLKNG 11415
Query: 165 KPLLLD-NIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKP 223
K + D NI L ++ H G ++C A K+ + V++ T
Sbjct: 11416 KEVTDDENIRIVEQGQVLQILRTDSDHAGKWSCVAENDAGVKE--LEMVLDVFT------ 11571
Query: 224 TRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVI 267
P +VS ++ LG I L CN +G W GS+I
Sbjct: 11572 --PPVVSVKSDNPIKALGETITLFCNASGNPYPQLKWAKGGSLI 11697
Score = 37.4 bits (85), Expect = 4.0
Identities = 29/113 (25%), Positives = 41/113 (35%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEF 215
P + W D KP ++ G L + NV E HRG +TCHA +T +
Sbjct: 3361 PVITWLLDDKPFTEGVVNEDG---SLTIPNVNEAHRGTFTCHAQNAAGNDTRTVTLTVH- 3528
Query: 216 ITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVID 268
T P I + E + + I L C + W + G ID
Sbjct: 3529 --------TTPTINAENQEKIALQ-NDDIVLECPAKALPPPVRLWTYEGEKID 3660
>gb|AC009197.8| Drosophila melanogaster, chromosome 2L, region 30A-30E, BAC clone
BACR14M08, complete sequence
Length = 170057
Score = 47.8 bits (112), Expect = 0.003
Identities = 38/147 (25%), Positives = 75/147 (50%), Gaps = 3/147 (2%)
Frame = +2
Query: 347 VIIVCSVFIYKIFKIDIVLWY--RDSCYDFLPIKASD-GKTYDAYILYPKTVGEGSTSDC 403
+II S+ ++ F+ I++W+ + C + D K YDA++ + T
Sbjct: 28502 LIIALSINVFICFRQPIMIWFYEHEICLSLAARRELDEDKKYDAFLSF--------THKD 28657
Query: 404 DIFVFKVLPEVLEKQCGYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILVRETSGFSW 463
+ + + + + + ++L Y RD VGE I + IN++VK SRR+II++ + +W
Sbjct: 28658 EDLIEEFVDRLENGRHKFRLCFYLRDWLVGESIPDCINQSVKGSRRIIILMTKNFLKSTW 28837
Query: 464 LGGSSEEQIAMYNALVQDGIKVVLLEL 490
G E ++A++ A +D K +++ L
Sbjct: 28838 --GRLEFRLALH-ATSRDRCKRLIVVL 28909
>gb|AF074901.1|AF074901 Caenorhabditis elegans hemicentin precursor (him-4) mRNA, complete
cds
Length = 15597
Score = 47.8 bits (112), Expect = 0.003
Identities = 71/310 (22%), Positives = 120/310 (37%), Gaps = 12/310 (3%)
Frame = +1
Query: 55 ITWYKDD---SKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISA 111
+ W KD ++ + + +I +K+ F+ A+ DSG Y C+VRN + R K+
Sbjct: 7801 VEWQKDGLTINQDTLRGDSFIQIPSSGKKMSFLSARKSDSGRYTCIVRNPAGEAR-KLFD 7977
Query: 112 KFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKN---ENNELPKLQWYKDCKPLL 168
V + P++ + Q + PY N + PK+ W D KPL
Sbjct: 7978 FAVNDPPSISDELSSANIQ---------TIVPYYPVEINCVVSGSPHPKVYWLFDDKPLE 8130
Query: 169 LDNIHF--SGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRP 226
D+ + + + L ++ +H G YTC A +GK +F+ + T P
Sbjct: 8131 PDSAAYELTNNGETLKIVRSQVEHAGTYTCEAQ-NNVGKARK-----DFLV----RVTAP 8280
Query: 227 VIVSPANETMEVDLGSQIQLICNVTGQLS-DIAYWKWNGSVIDEDDPVLGEDYYSVENPA 285
E + +G + L CN + YW + + + V+ Y + E
Sbjct: 8281 PHFEKEREEVVARVGDTMLLTCNAESSVPLSSVYWHAHDESV--QNGVITSKYAANEKTL 8454
Query: 286 NKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNF---QKHMIGIC 342
N V NI + FY C A N GI + +LI T + Q+ + I
Sbjct: 8455 N--------VTNIQLDDEGFY----YCTAVNEAGITKKFFKLIVIETPYFLDQQKLYPII 8598
Query: 343 VTLTVIIVCS 352
+ + + CS
Sbjct: 8599 LGKRLTLDCS 8628
Score = 47.4 bits (111), Expect = 0.004
Identities = 61/251 (24%), Positives = 95/251 (37%), Gaps = 21/251 (8%)
Frame = +1
Query: 44 CPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNS-- 101
CP+ N I+WY +D K + + + + K KL AK+ DSG Y CV RN+
Sbjct: 4429 CPVFSNPLP-QISWYLND-KPLIDDKTSWKTSDDKRKLHVFKAKITDSGVYKCVARNAAG 4602
Query: 102 ----SYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPK 157
S+ + + + E++ Y + K+ V L CP F +P+
Sbjct: 4603 EGSKSFQVEVIVPLNLDESK----YKKKVFAKEGEEVT----LGCPVSGF------PVPQ 4740
Query: 158 LQWY---------KDCKPLLLDN----IHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLG 204
+ W K K L N +HF +V+ K GNY C A
Sbjct: 4741 INWVVDGTVVEPGKKYKGATLSNDGLTLHFD---------SVSVKQEGNYHCVAQSKG-- 4887
Query: 205 KQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKW-- 262
+ ++ V + ++ +EV LG I L C++ + D + W
Sbjct: 4888 ---------NILDIDVELSVLAVPIVGEDDNLEVFLGKDISLSCDLQTESDDKTTFVWSI 5040
Query: 263 NGSVIDEDDPV 273
NGS D D V
Sbjct: 5041 NGSESDRPDNV 5073
Score = 47.4 bits (111), Expect = 0.004
Identities = 67/306 (21%), Positives = 114/306 (36%), Gaps = 22/306 (7%)
Frame = +1
Query: 149 KNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYP 208
K + + P + W K +P +DNI S D L+++ G YTC A+ +Y +
Sbjct: 9964 KIDGHPKPTISWLKGGRPFNMDNIILSPRGDTLMILKAQRFDGGLYTCVATNSYGDSEQ- 10140
Query: 209 ITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVID 268
+ N T+P I ++T + G +I L C V G + WK
Sbjct: 10141 --------DFKVNVYTKPYIDETIDQTPKAVAGGEIILKCPVLGNPTPTVTWKRG----- 10281
Query: 269 EDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG-IDAAYIQL 327
DD V + +++ N + + +++ T ++C A N G + Y
Sbjct: 10282 -DDAVPNDSRHTIVNNYDLKINSVTTE----------DAGQYSCIAVNEAGNLTTHYAAE 10428
Query: 328 IYPVTNFQK---HMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDS----CYDFLPI--- 377
+ F + ++ + T+ + C V + I W+R YD I
Sbjct: 10429 VIGKPTFVRKGGNLYEVIENDTITMDCGVTSRPLPSIS---WFRGDKPVYLYDRYSISPD 10599
Query: 378 ---------KASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQ--CGYKLFIY 426
K SDG Y + E TSD D+ + ++P ++K G L I
Sbjct: 10600 GSHITINKAKLSDGGKYIC-----RASNEAGTSDIDLILKILVPPKIDKSNIIGNPLAIV 10764
Query: 427 GRDDYV 432
R Y+
Sbjct: 10765 ARTIYL 10782
Score = 43.9 bits (102), Expect = 0.042
Identities = 56/244 (22%), Positives = 85/244 (33%)
Frame = +1
Query: 31 ILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVED 90
I+ + EI R + P E I+W+ D P+ Q L K
Sbjct: 9139 IVADTTLEIPCRTEGIPPPE----ISWFLDGK--PILEMPGVTYKQGDLSLRIDNIKPNQ 9300
Query: 91 SGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKN 150
G Y CV N + R + +EP A + + +G E F N
Sbjct: 9301 EGRYTCVAENKAG--RAEQDTYVEISEPPRVVMASEVMR-----VVEGRQTTIRCEVFGN 9459
Query: 151 ENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPIT 210
P + W KD +P D + FS L + G YTC A+
Sbjct: 9460 PE---PVVNWLKDGEPYTSDLLQFSTKLSYLHLRETTLADGGTYTCIAT----------N 9600
Query: 211 RVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDED 270
+ E T + + P + ++ G+ + C VTG+ WK NG I++
Sbjct: 9601 KAGESQTTTDVEVLVPPRIEDEERVLQGKEGNTYMVHCQVTGRPVPYVTWKRNGKEIEQF 9780
Query: 271 DPVL 274
+PVL
Sbjct: 9781 NPVL 9792
Score = 41.6 bits (96), Expect = 0.21
Identities = 37/165 (22%), Positives = 70/165 (42%), Gaps = 2/165 (1%)
Frame = +1
Query: 157 KLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYT--YLGKQYPITRVIE 214
++ W K PL ++ F+ RL ++N H YTC A+ T + K + + V++
Sbjct: 5566 QITWMKQGLPLTENDAIFTLDNTRLTILNANRDHEDIYTCVANNTAGQVSKDFDV--VVQ 5739
Query: 215 FITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVL 274
+ +N A T+E++ G +I L C+ G + A W +N + ++ +
Sbjct: 5740 VLPKIKN----------AVVTLEINEGEEIILTCDAEGNPTPTAKWDFNQGDLPKEAVFV 5889
Query: 275 GEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 319
++ V N N+++ + YK C+A N G
Sbjct: 5890 NNNHTVVVN-------------NVTKYHTGVYK----CYATNKVG 5973
Score = 40.0 bits (92), Expect = 0.61
Identities = 44/195 (22%), Positives = 77/195 (38%), Gaps = 6/195 (3%)
Frame = +1
Query: 81 LWFVPAKVEDSGHYYCVVRNSSYCLRIKI-----SAKFVENEPNLCYNAQAIFKQKLPVA 135
L F V+ G+Y+CV ++ L I + + V + NL +F K
Sbjct: 4822 LHFDSVSVKQEGNYHCVAQSKGNILDIDVELSVLAVPIVGEDDNL-----EVFLGK---- 4974
Query: 136 GDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYT 195
D L C ++ + + + +P DN+ RL + + ++ G Y
Sbjct: 4975 -DISLSCDLQTESDDKTTFVWSINGSESDRP---DNVQIPSDGHRLYITDAKPENNGKYM 5142
Query: 196 CHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQ-IQLICNVTGQL 254
C + + + +TL+ +P PV V P E + +G+ I L C VTG
Sbjct: 5143 CRVTNS-------AGKAERTLTLDVLEP--PVFVEPVFEANQKLIGNNPIILQCQVTGNP 5295
Query: 255 SDIAYWKWNGSVIDE 269
WK +G+ +D+
Sbjct: 5296 KPTVIWKIDGNDVDK 5340
Score = 37.7 bits (86), Expect = 3.0
Identities = 38/164 (23%), Positives = 72/164 (43%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEF 215
PK++W+K+ K L+ + + + +L +M ++ G Y+C GK + +
Sbjct: 2194 PKIRWFKNGKDLIKPDDYIKINEGQLHIMGAKDEDAGAYSC-VGENMAGKDVQVANL--- 2361
Query: 216 ITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLG 275
PT +I SP T+ V++ Q+ L C G W+ G+V+
Sbjct: 2362 --SVGRVPT--IIESP--HTVRVNIERQVTLQCLAVGIPPPEIEWQ-KGNVL-------- 2496
Query: 276 EDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 319
++ NP + + ++ ++IE + FTC A+NT+G
Sbjct: 2497 --LATLNNPRYTQLADGNLLITDAQIED---QGQFTCIARNTYG 2613
Score = 37.7 bits (86), Expect = 3.0
Identities = 49/224 (21%), Positives = 82/224 (35%), Gaps = 11/224 (4%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRN----SSYCLRIKIS 110
++W KD I KL A +E++G Y C+ N +S +++I
Sbjct: 11110 VSWTKDSRALDGDLTDNVDISDDGRKLTISQASLENAGLYTCIALNRAGEASLEFKVEIL 11289
Query: 111 AKFV------ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDC 164
+ V + +P + N I + V G + P ++W K+
Sbjct: 11290 SPPVIDISRNDVQPQVAVNQPTI--MRCAVTG----------------HPFPSIKWLKNG 11415
Query: 165 KPLLLD-NIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKP 223
K + D NI L ++ H G ++C A K+ + V++ T
Sbjct: 11416 KEVTDDENIRIVEQGQVLQILRTDSDHAGKWSCVAENDAGVKE--LEMVLDVFT------ 11571
Query: 224 TRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVI 267
P +VS ++ LG I L CN +G W GS+I
Sbjct: 11572 --PPVVSVKSDNPIKALGETITLFCNASGNPYPQLKWAKGGSLI 11697
Score = 37.4 bits (85), Expect = 4.0
Identities = 29/113 (25%), Positives = 41/113 (35%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEF 215
P + W D KP ++ G L + NV E HRG +TCHA +T +
Sbjct: 3361 PVITWLLDDKPFTEGVVNEDG---SLTIPNVNEAHRGTFTCHAQNAAGNDTRTVTLTVH- 3528
Query: 216 ITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVID 268
T P I + E + + I L C + W + G ID
Sbjct: 3529 --------TTPTINAENQEKIALQ-NDDIVLECPAKALPPPVRLWTYEGEKID 3660
>gb|AY061639.1| Rattus norvegicus neurofascin 155 kDa isoform mRNA, complete cds
Length = 3752
Score = 47.8 bits (112), Expect = 0.003
Identities = 54/237 (22%), Positives = 89/237 (36%), Gaps = 8/237 (3%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNS------SYCLRIK 108
I WYK P ++ + L EDSG Y+C+ N + +R+K
Sbjct: 955 IAWYKKGGDLP---SDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVK 1125
Query: 109 ISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPL- 167
+ +++ NL L DG LVC + N P +QW + PL
Sbjct: 1126 AAPYWLDEPKNLI----------LAPGEDGRLVC------RANGNPKPTVQWLVNGDPLQ 1257
Query: 168 -LLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRP 226
N + D +I + R Y C+ S ++ F+++ + P
Sbjct: 1258 SAPPNPNREVAGDTIIFRDTQISSRAVYQCNTS-----NEHGYLLANAFVSVLD---VPP 1413
Query: 227 VIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVEN 283
++SP N+ + V L ++ +L C G W NG + D G +Y+ EN
Sbjct: 1414 RMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLD----GGNYHVYEN 1572
Score = 39.7 bits (91), Expect = 0.80
Identities = 38/164 (23%), Positives = 62/164 (37%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEF 215
P + WYK L D F L + NV+E+ G Y C AS ++ I+ ++
Sbjct: 949 PDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 1128
Query: 216 ITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLG 275
++P + +I++P G +L+C G W NG + P
Sbjct: 1129 APYWLDEP-KNLILAP---------GEDGRLVCRANGNPKPTVQWLVNGDPLQSAPP--- 1269
Query: 276 EDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 319
NP N+ + + ++I SR + C N HG
Sbjct: 1270 -------NP-NREVAGDTIIFRDTQISSRAV---YQCNTSNEHG 1368
Score = 36.2 bits (82), Expect = 8.8
Identities = 38/148 (25%), Positives = 58/148 (38%), Gaps = 2/148 (1%)
Frame = +1
Query: 54 TITWYKDDSKTPVSTEQASRIHQHKE-KLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 112
T+ W+K+ S H ++ L + ED G Y CV N I K
Sbjct: 1504 TLRWFKNGQG---SNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATN--------ILGK 1650
Query: 113 FVENEPNL-CYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN 171
EN+ L + I++ G K++ + + W KD +PL + N
Sbjct: 1651 -AENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 1827
Query: 172 IHFSGVKDRLIVMNVAEKHRGNYTCHAS 199
D L + VAE+ +G+YTC AS
Sbjct: 1828 -RMKKEDDSLTIFGVAERDQGSYTCMAS 1908
>ref|NM_077235.1| Ig superfamily repeats (I-type)
Length = 15528
Score = 47.8 bits (112), Expect = 0.003
Identities = 71/310 (22%), Positives = 120/310 (37%), Gaps = 12/310 (3%)
Frame = +1
Query: 55 ITWYKDD---SKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISA 111
+ W KD ++ + + +I +K+ F+ A+ DSG Y C+VRN + R K+
Sbjct: 7801 VEWQKDGLTINQDTLRGDSFIQIPSSGKKMSFLSARKSDSGRYTCIVRNPAGEAR-KLFD 7977
Query: 112 KFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKN---ENNELPKLQWYKDCKPLL 168
V + P++ + Q + PY N + PK+ W D KPL
Sbjct: 7978 FAVNDPPSISDELSSANIQ---------TIVPYYPVEINCVVSGSPHPKVYWLFDDKPLE 8130
Query: 169 LDNIHF--SGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRP 226
D+ + + + L ++ +H G YTC A +GK +F+ + T P
Sbjct: 8131 PDSAAYELTNNGETLKIVRSQVEHAGTYTCEAQ-NNVGKARK-----DFLV----RVTAP 8280
Query: 227 VIVSPANETMEVDLGSQIQLICNVTGQLS-DIAYWKWNGSVIDEDDPVLGEDYYSVENPA 285
E + +G + L CN + YW + + + V+ Y + E
Sbjct: 8281 PHFEKEREEVVARVGDTMLLTCNAESSVPLSSVYWHAHDESV--QNGVITSKYAANEKTL 8454
Query: 286 NKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTNF---QKHMIGIC 342
N V NI + FY C A N GI + +LI T + Q+ + I
Sbjct: 8455 N--------VTNIQLDDEGFY----YCTAVNEAGITKKFFKLIVIETPYFLDQQKLYPII 8598
Query: 343 VTLTVIIVCS 352
+ + + CS
Sbjct: 8599 LGKRLTLDCS 8628
Score = 47.4 bits (111), Expect = 0.004
Identities = 61/251 (24%), Positives = 95/251 (37%), Gaps = 21/251 (8%)
Frame = +1
Query: 44 CPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNS-- 101
CP+ N I+WY +D K + + + + K KL AK+ DSG Y CV RN+
Sbjct: 4429 CPVFSNPLP-QISWYLND-KPLIDDKTSWKTSDDKRKLHVFKAKITDSGVYKCVARNAAG 4602
Query: 102 ----SYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPK 157
S+ + + + E++ Y + K+ V L CP F +P+
Sbjct: 4603 EGSKSFQVEVIVPLNLDESK----YKKKVFAKEGEEVT----LGCPVSGF------PVPQ 4740
Query: 158 LQWY---------KDCKPLLLDN----IHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLG 204
+ W K K L N +HF +V+ K GNY C A
Sbjct: 4741 INWVVDGTVVEPGKKYKGATLSNDGLTLHFD---------SVSVKQEGNYHCVAQSKG-- 4887
Query: 205 KQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKW-- 262
+ ++ V + ++ +EV LG I L C++ + D + W
Sbjct: 4888 ---------NILDIDVELSVLAVPIVGEDDNLEVFLGKDISLSCDLQTESDDKTTFVWSI 5040
Query: 263 NGSVIDEDDPV 273
NGS D D V
Sbjct: 5041 NGSESDRPDNV 5073
Score = 47.4 bits (111), Expect = 0.004
Identities = 67/306 (21%), Positives = 114/306 (36%), Gaps = 22/306 (7%)
Frame = +1
Query: 149 KNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYP 208
K + + P + W K +P +DNI S D L+++ G YTC A+ +Y +
Sbjct: 9964 KIDGHPKPTISWLKGGRPFNMDNIILSPRGDTLMILKAQRFDGGLYTCVATNSYGDSEQ- 10140
Query: 209 ITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVID 268
+ N T+P I ++T + G +I L C V G + WK
Sbjct: 10141 --------DFKVNVYTKPYIDETIDQTPKAVAGGEIILKCPVLGNPTPTVTWKRG----- 10281
Query: 269 EDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG-IDAAYIQL 327
DD V + +++ N + + +++ T ++C A N G + Y
Sbjct: 10282 -DDAVPNDSRHTIVNNYDLKINSVTTE----------DAGQYSCIAVNEAGNLTTHYAAE 10428
Query: 328 IYPVTNFQK---HMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDS----CYDFLPI--- 377
+ F + ++ + T+ + C V + I W+R YD I
Sbjct: 10429 VIGKPTFVRKGGNLYEVIENDTITMDCGVTSRPLPSIS---WFRGDKPVYLYDRYSISPD 10599
Query: 378 ---------KASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQ--CGYKLFIY 426
K SDG Y + E TSD D+ + ++P ++K G L I
Sbjct: 10600 GSHITINKAKLSDGGKYIC-----RASNEAGTSDIDLILKILVPPKIDKSNIIGNPLAIV 10764
Query: 427 GRDDYV 432
R Y+
Sbjct: 10765 ARTIYL 10782
Score = 43.9 bits (102), Expect = 0.042
Identities = 56/244 (22%), Positives = 85/244 (33%)
Frame = +1
Query: 31 ILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVED 90
I+ + EI R + P E I+W+ D P+ Q L K
Sbjct: 9139 IVADTTLEIPCRTEGIPPPE----ISWFLDGK--PILEMPGVTYKQGDLSLRIDNIKPNQ 9300
Query: 91 SGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKN 150
G Y CV N + R + +EP A + + +G E F N
Sbjct: 9301 EGRYTCVAENKAG--RAEQDTYVEISEPPRVVMASEVMR-----VVEGRQTTIRCEVFGN 9459
Query: 151 ENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPIT 210
P + W KD +P D + FS L + G YTC A+
Sbjct: 9460 PE---PVVNWLKDGEPYTSDLLQFSTKLSYLHLRETTLADGGTYTCIAT----------N 9600
Query: 211 RVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDED 270
+ E T + + P + ++ G+ + C VTG+ WK NG I++
Sbjct: 9601 KAGESQTTTDVEVLVPPRIEDEERVLQGKEGNTYMVHCQVTGRPVPYVTWKRNGKEIEQF 9780
Query: 271 DPVL 274
+PVL
Sbjct: 9781 NPVL 9792
Score = 41.6 bits (96), Expect = 0.21
Identities = 37/165 (22%), Positives = 70/165 (42%), Gaps = 2/165 (1%)
Frame = +1
Query: 157 KLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYT--YLGKQYPITRVIE 214
++ W K PL ++ F+ RL ++N H YTC A+ T + K + + V++
Sbjct: 5566 QITWMKQGLPLTENDAIFTLDNTRLTILNANRDHEDIYTCVANNTAGQVSKDFDV--VVQ 5739
Query: 215 FITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVL 274
+ +N A T+E++ G +I L C+ G + A W +N + ++ +
Sbjct: 5740 VLPKIKN----------AVVTLEINEGEEIILTCDAEGNPTPTAKWDFNQGDLPKEAVFV 5889
Query: 275 GEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 319
++ V N N+++ + YK C+A N G
Sbjct: 5890 NNNHTVVVN-------------NVTKYHTGVYK----CYATNKVG 5973
Score = 40.0 bits (92), Expect = 0.61
Identities = 44/195 (22%), Positives = 77/195 (38%), Gaps = 6/195 (3%)
Frame = +1
Query: 81 LWFVPAKVEDSGHYYCVVRNSSYCLRIKI-----SAKFVENEPNLCYNAQAIFKQKLPVA 135
L F V+ G+Y+CV ++ L I + + V + NL +F K
Sbjct: 4822 LHFDSVSVKQEGNYHCVAQSKGNILDIDVELSVLAVPIVGEDDNL-----EVFLGK---- 4974
Query: 136 GDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYT 195
D L C ++ + + + +P DN+ RL + + ++ G Y
Sbjct: 4975 -DISLSCDLQTESDDKTTFVWSINGSESDRP---DNVQIPSDGHRLYITDAKPENNGKYM 5142
Query: 196 CHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQ-IQLICNVTGQL 254
C + + + +TL+ +P PV V P E + +G+ I L C VTG
Sbjct: 5143 CRVTNS-------AGKAERTLTLDVLEP--PVFVEPVFEANQKLIGNNPIILQCQVTGNP 5295
Query: 255 SDIAYWKWNGSVIDE 269
WK +G+ +D+
Sbjct: 5296 KPTVIWKIDGNDVDK 5340
Score = 37.7 bits (86), Expect = 3.0
Identities = 38/164 (23%), Positives = 72/164 (43%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEF 215
PK++W+K+ K L+ + + + +L +M ++ G Y+C GK + +
Sbjct: 2194 PKIRWFKNGKDLIKPDDYIKINEGQLHIMGAKDEDAGAYSC-VGENMAGKDVQVANL--- 2361
Query: 216 ITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLG 275
PT +I SP T+ V++ Q+ L C G W+ G+V+
Sbjct: 2362 --SVGRVPT--IIESP--HTVRVNIERQVTLQCLAVGIPPPEIEWQ-KGNVL-------- 2496
Query: 276 EDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 319
++ NP + + ++ ++IE + FTC A+NT+G
Sbjct: 2497 --LATLNNPRYTQLADGNLLITDAQIED---QGQFTCIARNTYG 2613
Score = 37.7 bits (86), Expect = 3.0
Identities = 49/224 (21%), Positives = 82/224 (35%), Gaps = 11/224 (4%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRN----SSYCLRIKIS 110
++W KD I KL A +E++G Y C+ N +S +++I
Sbjct: 11110 VSWTKDSRALDGDLTDNVDISDDGRKLTISQASLENAGLYTCIALNRAGEASLEFKVEIL 11289
Query: 111 AKFV------ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDC 164
+ V + +P + N I + V G + P ++W K+
Sbjct: 11290 SPPVIDISRNDVQPQVAVNQPTI--MRCAVTG----------------HPFPSIKWLKNG 11415
Query: 165 KPLLLD-NIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKP 223
K + D NI L ++ H G ++C A K+ + V++ T
Sbjct: 11416 KEVTDDENIRIVEQGQVLQILRTDSDHAGKWSCVAENDAGVKE--LEMVLDVFT------ 11571
Query: 224 TRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVI 267
P +VS ++ LG I L CN +G W GS+I
Sbjct: 11572 --PPVVSVKSDNPIKALGETITLFCNASGNPYPQLKWAKGGSLI 11697
Score = 37.4 bits (85), Expect = 4.0
Identities = 29/113 (25%), Positives = 41/113 (35%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEF 215
P + W D KP ++ G L + NV E HRG +TCHA +T +
Sbjct: 3361 PVITWLLDDKPFTEGVVNEDG---SLTIPNVNEAHRGTFTCHAQNAAGNDTRTVTLTVH- 3528
Query: 216 ITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVID 268
T P I + E + + I L C + W + G ID
Sbjct: 3529 --------TTPTINAENQEKIALQ-NDDIVLECPAKALPPPVRLWTYEGEKID 3660
>emb|Z47068.1|CEF15G9 Caenorhabditis elegans cosmid F15G9, complete sequence
Length = 41345
Score = 47.4 bits (111), Expect = 0.004
Identities = 67/306 (21%), Positives = 114/306 (36%), Gaps = 22/306 (7%)
Frame = +1
Query: 149 KNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYP 208
K + + P + W K +P +DNI S D L+++ G YTC A+ +Y +
Sbjct: 40519 KIDGHPKPTISWLKGGRPFNMDNIILSPRGDTLMILKAQRFDGGLYTCVATNSYGDSEQ- 40695
Query: 209 ITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVID 268
+ N T+P I ++T + G +I L C V G + WK
Sbjct: 40696 --------DFKVNVYTKPYIDETIDQTPKAVAGGEIILKCPVLGNPTPTVTWKRG----- 40836
Query: 269 EDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG-IDAAYIQL 327
DD V + +++ N + + +++ T ++C A N G + Y
Sbjct: 40837 -DDAVPNDSRHTIVNNYDLKINSVTTE----------DAGQYSCIAVNEAGNLTTHYAAE 40983
Query: 328 IYPVTNFQK---HMIGICVTLTVIIVCSVFIYKIFKIDIVLWYRDS----CYDFLPI--- 377
+ F + ++ + T+ + C V + I W+R YD I
Sbjct: 40984 VIGKPTFVRKGGNLYEVIENDTITMDCGVTSRPLPSIS---WFRGDKPVYLYDRYSISPD 41154
Query: 378 ---------KASDGKTYDAYILYPKTVGEGSTSDCDIFVFKVLPEVLEKQ--CGYKLFIY 426
K SDG Y + E TSD D+ + ++P ++K G L I
Sbjct: 41155 GSHITINKAKLSDGGKYIC-----RASNEAGTSDIDLILKILVPPKIDKSNIIGNPLAIV 41319
Query: 427 GRDDYV 432
R Y+
Sbjct: 41320 ARTIYL 41337
Score = 37.7 bits (86), Expect = 3.0
Identities = 38/164 (23%), Positives = 72/164 (43%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEF 215
PK++W+K+ K L+ + + + +L +M ++ G Y+C GK + +
Sbjct: 17857 PKIRWFKNGKDLIKPDDYIKINEGQLHIMGAKDEDAGAYSC-VGENMAGKDVQVANL--- 18024
Query: 216 ITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLG 275
PT +I SP T+ V++ Q+ L C G W+ G+V+
Sbjct: 18025 --SVGRVPT--IIESP--HTVRVNIERQVTLQCLAVGIPPPEIEWQ-KGNVL-------- 18159
Query: 276 EDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 319
++ NP + + ++ ++IE + FTC A+NT+G
Sbjct: 18160 --LATLNNPRYTQLADGNLLITDAQIED---QGQFTCIARNTYG 18276
>dbj|AB056375.1|AB056375 Macaca fascicularis brain cDNA, clone:QflA-14957
Length = 1689
Score = 47.4 bits (111), Expect = 0.004
Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 9/195 (4%)
Frame = +2
Query: 86 AKVEDSGHYYCVVRN------SSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGG 139
A+V DS Y C V N S+ + + + +E + + N Q + L
Sbjct: 38 AQVSDSATYMCHVVNVAGTAEKSFHVDVYVPP-MIEGDLAMPLNKQVVIAHSLT------ 196
Query: 140 LVCPYMEFFKNENNELPKLQWYKDCKPLLL-DNIHFSGVKDRLIVMNVAEKHRGNYTCHA 198
L C K N P L W KD P+ DNIH +L +M+ E +G Y C A
Sbjct: 197 LEC------KAAGNPSPILTWLKDGVPVKANDNIHIEAGGKKLEIMSAQEIDQGQYICVA 358
Query: 199 SYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETME--VDLGSQIQLICNVTGQLSD 256
T + + I ++ + P + +ET V + + ++L C+VTG
Sbjct: 359 --TSVAGEKEIKYEVDVLV--------PPAIEGGDETSYFIVMVNNLLELDCHVTGSPPP 508
Query: 257 IAYWKWNGSVIDEDD 271
W +G +IDE D
Sbjct: 509 TIMWLKDGQLIDERD 553
Score = 41.2 bits (95), Expect = 0.27
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +2
Query: 54 TITWYKDDSKTPVSTEQAS---RIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKIS 110
+ITW KDD PV+T Q + I L +ED+G Y CV N++ + I
Sbjct: 785 SITWLKDDQ--PVNTAQGNLKVSIQSSGRVLQIAKTLLEDAGRYTCVATNAAGETQQHIQ 958
Query: 111 AKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKD 163
+EP +A + + + V+ L C K N +P + WYKD
Sbjct: 959 LHV--HEPPSLEDAGKMLNETVVVSNPVQLEC------KAAGNPVPVITWYKD 1093
>dbj|AB055861.1|AB055861 Procambarus clarkii I-con mRNA for I-connectin, complete cds
Length = 53424
Score = 47.4 bits (111), Expect = 0.004
Identities = 43/184 (23%), Positives = 71/184 (38%), Gaps = 4/184 (2%)
Frame = +2
Query: 15 ISSLEADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRI 74
+ L+ ++ +ERE+ I+ V NE K T+TW+KD + E+ +
Sbjct: 48914 VEKLQDEEVQEREQAILQVEVTNE-------------KATVTWHKDGEEITEHHERFKLV 49054
Query: 75 HQHK-EKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLP 133
Q K KL + A + D G Y CV+ + + + A+ + K K
Sbjct: 49055 SQGKTRKLVLMEATLSDEGEYTCVLGDQECTAELTVRE----------LPAEIVRKMKDQ 49204
Query: 134 VAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN---IHFSGVKDRLIVMNVAEKH 190
V G +E K + + WYKD + + + G RL+V N +
Sbjct: 49205 VVSKGDRATMEVELTKGD----AVITWYKDEVEIRFSDHYQLSIDGKVQRLMVYNCQFED 49372
Query: 191 RGNY 194
G Y
Sbjct: 49373 SGTY 49384
Score = 36.6 bits (83), Expect = 6.7
Identities = 48/225 (21%), Positives = 78/225 (34%), Gaps = 11/225 (4%)
Frame = +2
Query: 54 TITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 113
T+ WY D + S + + + L +D+G Y V N R +
Sbjct: 25505 TVKWYHQDRELKPSRDYVIEYIEDETSLHIEEVVDDDAGEYEVRVFNEVGEARSVATVIV 25684
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELP--KLQWYKDCKPLLLD- 170
++ E + K P G V + E P + WY+ + + D
Sbjct: 25685 IKPEEVIEMEPPKFIKPLQPQIVPEGEVA----ILEAEVTAKPPAEFTWYRHGQLITADE 25852
Query: 171 ----NIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITL----EENK 222
I K L++ + E G+YT A Q P+ R TL E+ +
Sbjct: 25853 ELEVQITSDNNKSSLVLGELFEDDSGDYTVTA-------QNPVGRASSTATLLVEGEDTE 26011
Query: 223 PTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVI 267
P +P + V G +++ C VTG+ + W NG I
Sbjct: 26012 DAEPPAFNPPLTPIRVMDGEEVRFTCKVTGKPTPKLIWFQNGRPI 26146
>ref|NM_008377.1| Mus musculus integral membrane glycoprotein (Img), mRNA
Length = 4822
Score = 47.0 bits (110), Expect = 0.005
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 2/147 (1%)
Frame = +1
Query: 55 ITWYKDDSKT-PVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 113
I W KD P + E+ + + + K++D G Y C +NS+ + +
Sbjct: 2347 IAWQKDGGTDFPAARERRMHVMPDDDVFFITDVKIDDMGVYSCTAQNSAGSVSANATLTV 2526
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPL-LLDNI 172
+E P+L A + + + V C K + P++ W K +PL L +
Sbjct: 2527 LET-PSL---AVPLEDRVVTVGETVAFQC------KATGSPTPRITWLKGGRPLSLTERH 2676
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHAS 199
HF+ L+V NV G YTC S
Sbjct: 2677 HFTPGNQLLVVQNVMIDDAGRYTCEMS 2757
>dbj|D78572.1|D78572 Mus musculus mRNA for membrane glycoprotein, complete cds
Length = 4822
Score = 47.0 bits (110), Expect = 0.005
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 2/147 (1%)
Frame = +1
Query: 55 ITWYKDDSKT-PVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 113
I W KD P + E+ + + + K++D G Y C +NS+ + +
Sbjct: 2347 IAWQKDGGTDFPAARERRMHVMPDDDVFFITDVKIDDMGVYSCTAQNSAGSVSANATLTV 2526
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPL-LLDNI 172
+E P+L A + + + V C K + P++ W K +PL L +
Sbjct: 2527 LET-PSL---AVPLEDRVVTVGETVAFQC------KATGSPTPRITWLKGGRPLSLTERH 2676
Query: 173 HFSGVKDRLIVMNVAEKHRGNYTCHAS 199
HF+ L+V NV G YTC S
Sbjct: 2677 HFTPGNQLLVVQNVMIDDAGRYTCEMS 2757
>gb|AF410153.1| Swinepox virus isolate 17077-99, complete genome
Length = 146454
Score = 47.0 bits (110), Expect = 0.005
Identities = 70/314 (22%), Positives = 124/314 (39%), Gaps = 16/314 (5%)
Frame = +1
Query: 21 DKCKEREEKIILVSSANEIDVRPCPL------NPNEHKGTITWYKDDSKTPVSTEQASRI 74
D C R + + + +++ CPL H TI W K E++SR+
Sbjct: 126862 DNCTYRGYRDFFLYNEEPANIK-CPLLNDILLRQKYHNYTILWKK-------LGERSSRL 127017
Query: 75 HQHKEKLW--FVPAKVEDSGHYY-CVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQK 131
++ F P K E G Y C++ ++ C + + + + P +CY+ +K
Sbjct: 127018 LNTHGSIFLDFFPYKSELRGSVYECMIILNNTCDQFILKLNDIRSNP-VCYHND--YK-- 127182
Query: 132 LPVAGDGGLVCPYMEFFKNENN-ELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKH 190
V +E F N N + + WYK+ +++D +S RL+V N
Sbjct: 127183 ---------VHTNIEIFCNVINLQYDYITWYKNNSEIIIDGYKYSNQSRRLLVYNTTYND 127335
Query: 191 RGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQ-IQLICN 249
G Y C+A YT GK I+R +++ + + N +D S+ Q+ C
Sbjct: 127336 SGIYYCNA-YTTHGKNTYISRRCSSVSIHSHS-YYDFYIEHINNITYIDPDSENTQIYCK 127509
Query: 250 VTGQLSD---IAYW--KWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESR 304
+ + YW ++ G + D Y ++ N++ I VL S R
Sbjct: 127510 AISYSNSSYILIYWEDEYGGYIYDNGI----YQYDNITLIGNEKVYMSILVLEKSAY-YR 127674
Query: 305 FYKHPFTCFAKNTH 318
+ + FTC A + +
Sbjct: 127675 YVNNTFTCLATSVY 127716
>gb|L19870.1|NVIKGFR Notophthalmus viridescens keratinocyte growth factor receptor
(KGFR) mRNA, complete cds
Length = 2681
Score = 47.0 bits (110), Expect = 0.005
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 13/180 (7%)
Frame = +1
Query: 153 NELPKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTYLGKQY 207
N P ++W K+ K ++ G K R LI+ +V GNYTC + +Y
Sbjct: 604 NPTPSMRWLKNGKEFKQEH-RIGGFKVRSQHFSLIMESVVPSDEGNYTC-----IMENEY 765
Query: 208 PITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTG----QLSDIAYWK 261
+ + E P RP++ + PAN T +V G + +C V + I +++
Sbjct: 766 GSINHTYHLDVVERSPHRPILQAGLPANTTTKV--GGDAEFVCKVYSDAQPHIQWIRHFE 939
Query: 262 WNGSVIDEDDPVLGEDYYSV--ENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 319
NGS I D G Y V + N + ++T+ N++E + + +TC N G
Sbjct: 940 LNGSKIGPD----GHPYLKVLKRSGINSSNAEVLTLHNVTEAD----RGQYTCKVSNYIG 1095
Score = 38.9 bits (89), Expect = 1.4
Identities = 52/205 (25%), Positives = 79/205 (38%), Gaps = 26/205 (12%)
Frame = +1
Query: 27 EEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPA 86
E+K+ V +AN + R CP N ++ W K+ + +Q RI K +
Sbjct: 541 EKKLHAVPAANTVKFR-CPAGGNPTP-SMRWLKNGKEF----KQEHRIGGFKVRSQHFSL 702
Query: 87 KVE-----DSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLP------VA 135
+E D G+Y C++ N + VE P+ + I + LP V
Sbjct: 703 IMESVVPSDEGNYTCIMENEYGSINHTYHLDVVERSPH-----RPILQAGLPANTTTKVG 867
Query: 136 GDGGLVCPYMEFFKNENNELPKLQWYKD---------------CKPLLLDNIHFSGVKDR 180
GD VC K ++ P +QW + K L I+ S +
Sbjct: 868 GDAEFVC------KVYSDAQPHIQWIRHFELNGSKIGPDGHPYLKVLKRSGINSSNA-EV 1026
Query: 181 LIVMNVAEKHRGNYTCHASYTYLGK 205
L + NV E RG YTC S Y+G+
Sbjct: 1027LTLHNVTEADRGQYTCKVS-NYIGE 1098
>emb|Y14852.1|OCY14852 Oryctolagus cuniculus mRNA for tintin (N2A)
Length = 18848
Score = 46.6 bits (109), Expect = 0.007
Identities = 68/278 (24%), Positives = 106/278 (37%), Gaps = 5/278 (1%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
++WYK D+K + + L F DSG Y C NS + S
Sbjct: 14800 VSWYKGDTKLRPTATYKMHFRNNVATLVFNQVDSNDSGEYICRAENS--VGEVSSSTFLT 14973
Query: 115 ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHF 174
E L + +Q V GL P + +E + WYKD KPL
Sbjct: 14974 VQEQKL---PPSFSRQLRDVQETVGL--PVVFECTVNGSEPISVSWYKDGKPLKDSPNVQ 15138
Query: 175 SGVKDRLIVMNVAEKHR---GNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSP 231
+ D +N+ + R G Y+C A+ +G R+I +T +N P + ++
Sbjct: 15139 TSFLDNTATLNIFKTDRSLAGQYSCTAT-NPIGSASSSARLI--LTEGKNPPFFDIPLA- 15306
Query: 232 ANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYY--SVENPANKRR 289
T++ +G C+VTG W + I G +Y +EN A+
Sbjct: 15307 ---TVDAVVGESADFECHVTGTQPIKVSWAKDNREIRS-----GGNYQISYLENSAH--- 15453
Query: 290 STLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQL 327
+T+L + + +S Y TC A N G D+ QL
Sbjct: 15454 ---LTILKVDKGDSGQY----TCHAVNEVGKDSCTAQL 15546
Score = 45.4 bits (106), Expect = 0.015
Identities = 48/206 (23%), Positives = 77/206 (37%), Gaps = 7/206 (3%)
Frame = +1
Query: 54 TITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 113
T++WYK D+K + E + + L F + DSG Y C+ NS K +
Sbjct: 9151 TVSWYKGDTKLRSTPEYRTYFTNNVATLVFNKVNINDSGEYTCIAENSIGTASSKTVFRI 9330
Query: 114 VENE--PNLCYNAQAIFKQ-KLPVAGDGGLVCPYMEFFKNENNELP-KLQWYKDCKPLLL 169
E + P+ + I + LPV L C N P ++ WY+D L
Sbjct: 9331 QERQLPPSFARQLKDIEQTVGLPVT----LTC-------RLNGSAPIQVCWYRDGVLLRD 9477
Query: 170 DNIHFSGVKDRLIVMNVAE---KHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRP 226
D + D + + + + H G Y+C AS P+ L +P +
Sbjct: 9478 DENLQTSFVDNVATLKILQTDLSHSGQYSCSAS-------NPLGTASSSARLTAREPKKS 9636
Query: 227 VIVSPANETMEVDLGSQIQLICNVTG 252
+++V G C+VTG
Sbjct: 9637 PFFDIKPVSIDVIAGESADFECHVTG 9714
Score = 40.0 bits (92), Expect = 0.61
Identities = 54/231 (23%), Positives = 88/231 (37%), Gaps = 12/231 (5%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV 114
+ WYKD+++ S++ + L VEDSG Y C N++ S K
Sbjct: 12835 VLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVK 13014
Query: 115 ENEPNLCYNAQAIFKQK-LPV----AGDGGLVC------PYMEFFKNENNELPKLQWYKD 163
E +F++K PV D L C P+ + + EL + YK
Sbjct: 13015 E---------PPVFRKKPHPVETLKGADVHLECELQGTPPF*VSWHKDKRELRSGKKYKI 13167
Query: 164 CKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKP 223
L +IH ++NV G Y C AS + ITL+
Sbjct: 13168 MSENFLTSIH---------ILNVDSADIGEYQCKAS-----NDVGSDTCVGSITLK---- 13293
Query: 224 TRPVIVSPANETMEVDLGSQIQLICNVTG-QLSDIAYWKWNGSVIDEDDPV 273
P V ++ V +G ++QL + G + +A++K G ++ E D +
Sbjct: 13294 APPRFVKKLSDISTV-VGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNI 13443
Score = 40.0 bits (92), Expect = 0.61
Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 7/156 (4%)
Frame = +1
Query: 50 EHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKI 109
+ K T+TW KD K P + L AK++DSG Y C N +
Sbjct: 1834 DRKVTVTWNKDGQKLPPGKDYKIYFEDKIASLEIPLAKLKDSGTYVCTASNEAGSSSSST 2013
Query: 110 SAKFVENEPNLCYNAQAIFKQKLPVAGDGG-LVCPYMEFFKNENNELPKLQWYKDCKPLL 168
S V P+ + + L + G+ L C K + + + ++ W+K+ K L
Sbjct: 2014 SVT-VREPPSF---VKKVDPSYLMLPGESARLHC------KLKGSPVIQVTWFKNNKELS 2163
Query: 169 LDN------IHFSGVKDRLIVMNVAEKHRGNYTCHA 198
N +H + D + +V + GNY+C A
Sbjct: 2164 ESNTVRMSFVHSEAILD---ITDVKVEDSGNYSCEA 2262
Score = 36.6 bits (83), Expect = 6.7
Identities = 57/244 (23%), Positives = 95/244 (38%), Gaps = 3/244 (1%)
Frame = +1
Query: 88 VEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEF 147
VED+G Y C + N+S + SA+ + EP Y + + K+ V L C
Sbjct: 14620 VEDAGQYNCYIENASG--KDSCSAQILILEPP--YFVKQLEPVKVTVGDAASLQC----- 14772
Query: 148 FKNENNELPKLQWYK---DCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLG 204
+ + WYK +P +HF L+ V G Y C A + +G
Sbjct: 14773 -QLAGTPEIAVSWYKGDTKLRPTATYKMHFRNNVATLVFNQVDSNDSGEYICRAENS-VG 14946
Query: 205 KQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNG 264
+ T F+T++E K P S ++ +G + C V G W +G
Sbjct: 14947 EVSSST----FLTVQEQK--LPPSFSRQLRDVQETVGLPVVFECTVNGSEPISVSWYKDG 15108
Query: 265 SVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAY 324
+ +D P + + ++N A LNI + + R ++C A N G ++
Sbjct: 15109 KPL-KDSPNVQTSF--LDNTA---------TLNIFKTD-RSLAGQYSCTATNPIGSASSS 15249
Query: 325 IQLI 328
+LI
Sbjct: 15250 ARLI 15261
Score = 36.6 bits (83), Expect = 6.7
Identities = 29/124 (23%), Positives = 46/124 (36%), Gaps = 6/124 (4%)
Frame = +1
Query: 51 HKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNS------SYC 104
H +I W+KDD + P S + H + L + DSG Y C N S
Sbjct: 4930 HPISIQWFKDDQEIPASEKYKFSFHDNTAFLEISHLEGTDSGTYTCSATNKAGHNQCSGH 5109
Query: 105 LRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDC 164
L +K F+E + N + K V G + + + K ++ + W D
Sbjct: 5110 LTVKEPPYFLEKPQSQDVNPNTRVQLKALVGGTAPMTIKWFKDNKELHSGAARSVWKDDT 5289
Query: 165 KPLL 168
+L
Sbjct: 5290 STIL 5301
>gb|AF024638.1|AF024638 Mus musculus fibroblast growth factor receptor 3, acid box-deleted
isoform (FR3) mRNA, alternatively spliced, complete cds
Length = 2407
Score = 46.6 bits (109), Expect = 0.007
Identities = 69/284 (24%), Positives = 108/284 (37%), Gaps = 17/284 (5%)
Frame = +3
Query: 53 GTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 112
G W KD + S RI ++L + A ED+G Y C R L ++
Sbjct: 213 GPTVWAKDGTGLVAS----HRILVGPQRLQVLNASHEDAGVYSCQHR-----LTRRVLCH 365
Query: 113 FVENEPNLCYNAQAIFKQK----LPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLL 168
F Y + K +P A CP N P + W K+ K
Sbjct: 366 FSVRVTGAPYWTRPERMDKKLLAVPAANTVRFRCPAA------GNPTPSISWLKNGKEFR 527
Query: 169 LDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKP 223
++ G+K R L++ +V RGNYTC + ++ R + + E P
Sbjct: 528 GEH-RIGGIKLRHQQWSLVMESVVPSDRGNYTC-----VVENKFGSIRQTYTLDVLERSP 689
Query: 224 TRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW----KWNGSVIDEDDPVLGED 277
RP++ + PAN+T LGS ++ C V W + NGS + D G
Sbjct: 690 HRPILQAGLPANQT--AILGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPD----GTP 851
Query: 278 YYSVENPANKRRSTLITVLNISEIESRFYKH--PFTCFAKNTHG 319
Y +V A +T L + + + ++ +TC A N+ G
Sbjct: 852 YVTVLKTAG--ANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIG 977
>emb|AL031575.1|HS127F18 Human DNA sequence from clone 127F18 on chromosome Xp11.4-21.3.
Contains part of a novel gene with some similarity to
parts of chicken Myosin Light Chain and various species'
Interleukin-1 Receptor Type 1 (IL1-R-1). Contains GSSs,
complete sequence [H>
Length = 77439
Score = 46.6 bits (109), Expect = 0.007
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +2
Query: 99 RNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKL 158
RNS+YC+++ IS EN+ LCYN++ + +K ++ + C +E F E P++
Sbjct: 54308 RNSTYCMKVSISLTVGENDTGLCYNSKMKYFEKAELSKSKEISCRDIEDFLLPTRE-PEI 54484
Query: 159 QWYK 162
WYK
Sbjct: 54485 LWYK 54496
>ref|NM_008779.1| Mus musculus contactin 3 (Cntn3), mRNA
Length = 3448
Score = 46.6 bits (109), Expect = 0.007
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 4/200 (2%)
Frame = +2
Query: 73 RIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKL 132
RI L V DSG + C+ N + K V + P+ N +K+
Sbjct: 1280 RIQIENGALTITNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSRNPM----KKM 1447
Query: 133 PVAGDGGLVCPYMEFFKNENNELPK-LQWYKDCKPLLLDNIHFSGVKDR-LIVMNVAEKH 190
G LV + P+ L ++K ++ + S + D L +MNV +
Sbjct: 1448 VQVQVGSLV-----ILDCKPRASPRALSFWKKGDMMVREQARVSFLNDGGLKIMNVTKAD 1612
Query: 191 RGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNV 250
G YTC A + GK T ++ +PTR +I++P+N M+V +G + L C V
Sbjct: 1613 AGTYTCTAENQF-GKANGTTHLV------VTEPTR-IILAPSN--MDVAVGESVILPCQV 1762
Query: 251 T-GQLSDIAY-WKWNGSVID 268
L DI + W +NG++ D
Sbjct: 1763 QHDPLLDIMFAWYFNGALTD 1822
Score = 43.5 bits (101), Expect = 0.055
Identities = 70/332 (21%), Positives = 122/332 (36%), Gaps = 28/332 (8%)
Frame = +2
Query: 48 PNEHKGTITWYKDDSKTPVSTEQASR--IHQHKEKLWFVPAKVEDSGHYYCVVRN----- 100
P H G +++ ++ P E+ SR + Q L+ + D G+Y CVV +
Sbjct: 629 PPPHSGELSYAWVFNEYPSFVEEDSRRLVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNT 808
Query: 101 ----SSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELP 156
S L ++ E EP + + F + LP A G V +E F N +P
Sbjct: 809 RVLGSPTPLVLRSDGVMGEYEPKI----EVQFPETLP-AAKGSTV--RLECFA-LGNPVP 964
Query: 157 KLQWYKDCKPLLLDNIHFSGVKDRLIVMN-----------VAEKHRGNYTCHASYTYLGK 205
++ W + + I L + N +AE RG TY K
Sbjct: 965 QINWRRSDGMPFPNKIKLRKFNGMLEIQNFQQEDTGSYEGIAENSRGKNVARGRLTYYAK 1144
Query: 206 QYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGS 265
Y + + +E+ + + C +G+ W NG
Sbjct: 1145PYWLQLL---------------------RDVEIAVEDSLYWECRASGKPKPSYRWLKNG- 1258
Query: 266 VIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGI--DAA 323
D ++ E+ +EN A +T+ N++ +S F C A+N HG+ +A
Sbjct: 1259-----DALVLEERIQIENGA-------LTITNLNVTDSGM----FQCIAENKHGLIYSSA 1390
Query: 324 YIQLIYPVTNF----QKHMIGICVTLTVIIVC 351
++++ +F K M+ + V VI+ C
Sbjct: 1391ELKVVASAPDFSRNPMKKMVQVQVGSLVILDC 1486
>gb|L01991.1|MUSNGP Mus musculus TAFG-1-like neuronal glycoprotein (PCS) mRNA, complete
cds
Length = 3448
Score = 46.6 bits (109), Expect = 0.007
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 4/200 (2%)
Frame = +2
Query: 73 RIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKL 132
RI L V DSG + C+ N + K V + P+ N +K+
Sbjct: 1280 RIQIENGALTITNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSRNPM----KKM 1447
Query: 133 PVAGDGGLVCPYMEFFKNENNELPK-LQWYKDCKPLLLDNIHFSGVKDR-LIVMNVAEKH 190
G LV + P+ L ++K ++ + S + D L +MNV +
Sbjct: 1448 VQVQVGSLV-----ILDCKPRASPRALSFWKKGDMMVREQARVSFLNDGGLKIMNVTKAD 1612
Query: 191 RGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNV 250
G YTC A + GK T ++ +PTR +I++P+N M+V +G + L C V
Sbjct: 1613 AGTYTCTAENQF-GKANGTTHLV------VTEPTR-IILAPSN--MDVAVGESVILPCQV 1762
Query: 251 T-GQLSDIAY-WKWNGSVID 268
L DI + W +NG++ D
Sbjct: 1763 QHDPLLDIMFAWYFNGALTD 1822
Score = 43.5 bits (101), Expect = 0.055
Identities = 70/332 (21%), Positives = 122/332 (36%), Gaps = 28/332 (8%)
Frame = +2
Query: 48 PNEHKGTITWYKDDSKTPVSTEQASR--IHQHKEKLWFVPAKVEDSGHYYCVVRN----- 100
P H G +++ ++ P E+ SR + Q L+ + D G+Y CVV +
Sbjct: 629 PPPHSGELSYAWVFNEYPSFVEEDSRRLVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNT 808
Query: 101 ----SSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELP 156
S L ++ E EP + + F + LP A G V +E F N +P
Sbjct: 809 RVLGSPTPLVLRSDGVMGEYEPKI----EVQFPETLP-AAKGSTV--RLECFA-LGNPVP 964
Query: 157 KLQWYKDCKPLLLDNIHFSGVKDRLIVMN-----------VAEKHRGNYTCHASYTYLGK 205
++ W + + I L + N +AE RG TY K
Sbjct: 965 QINWRRSDGMPFPNKIKLRKFNGMLEIQNFQQEDTGSYEGIAENSRGKNVARGRLTYYAK 1144
Query: 206 QYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGS 265
Y + + +E+ + + C +G+ W NG
Sbjct: 1145PYWLQLL---------------------RDVEIAVEDSLYWECRASGKPKPSYRWLKNG- 1258
Query: 266 VIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGI--DAA 323
D ++ E+ +EN A +T+ N++ +S F C A+N HG+ +A
Sbjct: 1259-----DALVLEERIQIENGA-------LTITNLNVTDSGM----FQCIAENKHGLIYSSA 1390
Query: 324 YIQLIYPVTNF----QKHMIGICVTLTVIIVC 351
++++ +F K M+ + V VI+ C
Sbjct: 1391ELKVVASAPDFSRNPMKKMVQVQVGSLVILDC 1486
>ref|XM_093169.1| Homo sapiens similar to dA127F18.1 (PUTATIVE novel protein with
some similarity to parts of chicken Myosin Light Chain
and various species Interleukin-1 Receptor Type 1
(IL1-R-1)) (LOC170191), mRNA
Length = 427
Score = 46.6 bits (109), Expect = 0.007
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +2
Query: 99 RNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKL 158
RNS+YC+++ IS EN+ LCYN++ + +K ++ + C +E F E P++
Sbjct: 215 RNSTYCMKVSISLTVGENDTGLCYNSKMKYFEKAELSKSKEISCRDIEDFLLPTRE-PEI 391
Query: 159 QWYK 162
WYK
Sbjct: 392 LWYK 403
>gb|U81035.1|RNU81035 Rattus norvegicus ankyrin binding cell adhesion molecule
neurofascin mRNA, partial cds
Length = 3498
Score = 46.6 bits (109), Expect = 0.007
Identities = 53/237 (22%), Positives = 89/237 (37%), Gaps = 8/237 (3%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNS------SYCLRIK 108
I WYK P ++ + L EDSG Y+C+ N + +R+K
Sbjct: 793 IAWYKKGGDLP---SDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVK 963
Query: 109 ISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPL- 167
+ +++ NL L DG LVC + N P +QW + PL
Sbjct: 964 AAPYWLDEPKNLI----------LAPGEDGRLVC------RANGNPKPTVQWLVNGDPLQ 1095
Query: 168 -LLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRP 226
N + D +I + R Y C+ S ++ F+++ + P
Sbjct: 1096SAPPNPNREVAGDTIIFRDTQISSRAVYQCNTS-----NEHGYLLANAFVSVLD---VPP 1251
Query: 227 VIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVEN 283
++SP N+ + V L ++ +L C G W NG + D G +Y+ +N
Sbjct: 1252RMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLD----GGNYHVYQN 1410
Score = 39.7 bits (91), Expect = 0.80
Identities = 38/164 (23%), Positives = 62/164 (37%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEF 215
P + WYK L D F L + NV+E+ G Y C AS ++ I+ ++
Sbjct: 787 PDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA 966
Query: 216 ITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLG 275
++P + +I++P G +L+C G W NG + P
Sbjct: 967 APYWLDEP-KNLILAP---------GEDGRLVCRANGNPKPTVQWLVNGDPLQSAPP--- 1107
Query: 276 EDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 319
NP N+ + + ++I SR + C N HG
Sbjct: 1108-------NP-NREVAGDTIIFRDTQISSRAV---YQCNTSNEHG 1206
Score = 36.6 bits (83), Expect = 6.7
Identities = 46/184 (25%), Positives = 68/184 (36%), Gaps = 11/184 (5%)
Frame = +1
Query: 54 TITWYKDDSKTPVSTEQASRIHQHKE-KLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 112
T+ W+K+ S H ++ L + ED G Y CV N I K
Sbjct: 1342 TLRWFKNGQG---SNLDGGNYHVYQNGSLEIKMIRKEDQGIYTCVATN--------ILGK 1488
Query: 113 FVENEPNL-CYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN 171
EN+ L + I++ G K++ + + W KD +PL + N
Sbjct: 1489 -AENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 1665
Query: 172 IHFSGVKDRLIVMNVAEKHRGNYTCHASYTY---LGKQY------PITRVIEFITLEENK 222
D L + VAE+ +G+YTC AS L K Y T L + +
Sbjct: 1666 -RMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGR 1842
Query: 223 PTRP 226
P RP
Sbjct: 1843 PDRP 1854
>ref|XM_080991.1| off-track, mRNA
Length = 4638
Score = 46.2 bits (108), Expect = 0.009
Identities = 72/316 (22%), Positives = 115/316 (35%), Gaps = 7/316 (2%)
Frame = +2
Query: 60 DDSKTPVSTEQASRI-HQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEP 118
D K + E A + H+ L F D+G Y C ++ ++ I S +E
Sbjct: 1844 DSGKDALLREDARLVLHKQNGTLSFASIIASDAGQYQCQLQLEAHA-PINSSPGILEVIE 2020
Query: 119 NLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVK 178
L + Q K A + C K + P++QW +D + L +
Sbjct: 2021 QLKFVPQPTSKNLELDAVVAKVHC------KAQGTPTPQVQWVRDGENTTLPDHVEVDAN 2182
Query: 179 DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEV 238
LI NV +HRGNYTC A+ Q I T+ N P P +E
Sbjct: 2183 GTLIFRNVNSEHRGNYTCLAT----NSQGQIN-----ATVAINVVVTPKFSVPPVGPIET 2335
Query: 239 DLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNI 298
+ + C G W D+D L E+ E TL + N+
Sbjct: 2336 SEQGTVVMHCQAIGDPKPTIQW-------DKDLKYLSENNTDRERFRFLENGTL-EIRNV 2491
Query: 299 SEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTN-----FQKHMIGICVTLTVIIVCSV 353
++E + + C N+ G+ +QL+ T + G VT V+I +V
Sbjct: 2492 -QVED---EGSYGCTIGNSAGLKREDVQLVVKTTGDGFAPEESGGDGFLVTRAVLITMTV 2659
Query: 354 FI-YKIFKIDIVLWYR 368
+ Y + + ++LW R
Sbjct: 2660 ALAYIVLVVGLMLWCR 2707
>ref|NM_078981.1| Drosophila melanogaster off-track (otk), mRNA
Length = 4640
Score = 46.2 bits (108), Expect = 0.009
Identities = 72/316 (22%), Positives = 115/316 (35%), Gaps = 7/316 (2%)
Frame = +2
Query: 60 DDSKTPVSTEQASRI-HQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEP 118
D K + E A + H+ L F D+G Y C ++ ++ I S +E
Sbjct: 1832 DSGKDALLREDARLVLHKQNGTLSFASIIASDAGQYQCQLQLEAHA-PINSSPGILEVIE 2008
Query: 119 NLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVK 178
L + Q K A + C K + P++QW +D + L +
Sbjct: 2009 QLKFVPQPTSKNLELDAVVAKVHC------KAQGTPTPQVQWVRDGENTTLPDHVEVDAN 2170
Query: 179 DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEV 238
LI NV +HRGNYTC A+ Q I T+ N P P +E
Sbjct: 2171 GTLIFRNVNSEHRGNYTCLAT----NSQGQIN-----ATVAINVVVTPKFSVPPVGPIET 2323
Query: 239 DLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNI 298
+ + C G W D+D L E+ E TL + N+
Sbjct: 2324 SEQGTVVMHCQAIGDPKPTIQW-------DKDLKYLSENNTDRERFRFLENGTL-EIRNV 2479
Query: 299 SEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTN-----FQKHMIGICVTLTVIIVCSV 353
++E + + C N+ G+ +QL+ T + G VT V+I +V
Sbjct: 2480 -QVED---EGSYGCTIGNSAGLKREDVQLVVKTTGDGFAPEESGGDGFLVTRAVLITMTV 2647
Query: 354 FI-YKIFKIDIVLWYR 368
+ Y + + ++LW R
Sbjct: 2648 ALAYIVLVVGLMLWCR 2695
>emb|X63453.1|DMDTRK D.melanogaster mRNA for gp160-Dtrk
Length = 4640
Score = 46.2 bits (108), Expect = 0.009
Identities = 72/316 (22%), Positives = 115/316 (35%), Gaps = 7/316 (2%)
Frame = +2
Query: 60 DDSKTPVSTEQASRI-HQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEP 118
D K + E A + H+ L F D+G Y C ++ ++ I S +E
Sbjct: 1832 DSGKDALLREDARLVLHKQNGTLSFASIIASDAGQYQCQLQLEAHA-PINSSPGILEVIE 2008
Query: 119 NLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVK 178
L + Q K A + C K + P++QW +D + L +
Sbjct: 2009 QLKFVPQPTSKNLELDAVVAKVHC------KAQGTPTPQVQWVRDGENTTLPDHVEVDAN 2170
Query: 179 DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEV 238
LI NV +HRGNYTC A+ Q I T+ N P P +E
Sbjct: 2171 GTLIFRNVNSEHRGNYTCLAT----NSQGQIN-----ATVAINVVVTPKFSVPPVGPIET 2323
Query: 239 DLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNI 298
+ + C G W D+D L E+ E TL + N+
Sbjct: 2324 SEQGTVVMHCQAIGDPKPTIQW-------DKDLKYLSENNTDRERFRFLENGTL-EIRNV 2479
Query: 299 SEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVTN-----FQKHMIGICVTLTVIIVCSV 353
++E + + C N+ G+ +QL+ T + G VT V+I +V
Sbjct: 2480 -QVED---EGSYGCTIGNSAGLKREDVQLVVKTTGDGFAPEESGGDGFLVTRAVLITMTV 2647
Query: 354 FI-YKIFKIDIVLWYR 368
+ Y + + ++LW R
Sbjct: 2648 ALAYIVLVVGLMLWCR 2695
>ref|XM_070947.1| Homo sapiens hypothetical gene LOC138524 (LOC138524), mRNA
Length = 2467
Score = 46.2 bits (108), Expect = 0.009
Identities = 46/211 (21%), Positives = 79/211 (36%), Gaps = 1/211 (0%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKL-WFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF 113
+TW +D P ST + +++ ++ +P D G Y CV N++ R +
Sbjct: 1759 LTWVRDWRVLPASTGRVAQLADLSLEISGIIPT---DGGRYQCVASNANGVTRASVWLLV 1929
Query: 114 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIH 173
E + + F Q + V + C + P + W ++ + L D+
Sbjct: 1930 REAPQVSIHTSSQHFSQGVEVK----VSCSASGY------PTPHISWSRESQALQEDSRI 2079
Query: 174 FSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPAN 233
+ LI+ VA + GNY+C A+ Q +T T P VS N
Sbjct: 2080 HVDAQGTLIIQGVAPEDAGNYSCQATNEVGTDQETVTLYY----------TDPPSVSAVN 2229
Query: 234 ETMEVDLGSQIQLICNVTGQLSDIAYWKWNG 264
+ V +G + L+C +G W G
Sbjct: 2230 AVVLVAVGEEAVLVCEASGVPPPRVIWYRGG 2322
>emb|Y00051.1|MMNCAMR Mouse mRNA for neural cell adhesion molecule (NCAM)
Length = 2583
Score = 46.2 bits (108), Expect = 0.009
Identities = 65/291 (22%), Positives = 112/291 (38%), Gaps = 9/291 (3%)
Frame = +3
Query: 46 LNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVV-----RN 100
L+PN+ + ++ W DDS T L A ++D+G Y CVV
Sbjct: 345 LSPNQQRISVVWNDDDSST----------------LTIYNANIDDAGIYKCVVTAEDGTQ 476
Query: 101 SSYCLRIKISAKFV-ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQ 159
S + +KI K + +N P Q+ D +VC + P +
Sbjct: 477 SEATVNVKIFQKLMFKNAPT---------PQEFKEGEDAVIVCDVVSSLP------PTII 611
Query: 160 W-YKDCKPLLLDNIHFSGVKDR-LIVMNVAEKHRGNYTCHASYTYLGK-QYPITRVIEFI 216
W +K +L ++ F + + L + + + G Y C G+ + +VI +
Sbjct: 612 WKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNV 791
Query: 217 TLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGE 276
PT S N T +LG + L+C+ G W +G I+ ++ E
Sbjct: 792 -----PPTVQARQSIVNAT--ANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEE----E 938
Query: 277 DYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQL 327
D S + ++ S+ +T+ N+ + + Y C A+N G A I L
Sbjct: 939 DERSRSSVSD---SSEVTIRNVDKNDEAEY----VCIAENKAGEQDASIHL 1070
>gb|AC007165.3|AC007165 Homo sapiens BAC clone RP11-451C2, complete sequence
Length = 45813
Score = 46.2 bits (108), Expect = 0.009
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = -1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYC 104
+TW+K+DS V E+ +R+ LW +PA EDSG Y C R S C
Sbjct: 37992 LTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTR*VSLC 37843
Score = 38.9 bits (89), Expect = 1.4
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = -3
Query: 98 VRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPK 157
+RN+SYC ++ I + EN + + Q L ++ G LVCP + F + ++ K
Sbjct: 31819 IRNASYCDKMSIELRVFENTD--AFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDV-K 31649
Query: 158 LQWYK 162
+QWYK
Sbjct: 31648 IQWYK 31634
>ref|NM_010875.1| Mus musculus neural cell adhesion molecule 1 (Ncam1), mRNA
Length = 2178
Score = 46.2 bits (108), Expect = 0.009
Identities = 65/291 (22%), Positives = 112/291 (38%), Gaps = 9/291 (3%)
Frame = +1
Query: 46 LNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVV-----RN 100
L+PN+ + ++ W DDS T L A ++D+G Y CVV
Sbjct: 184 LSPNQQRISVVWNDDDSST----------------LTIYNANIDDAGIYKCVVTAEDGTQ 315
Query: 101 SSYCLRIKISAKFV-ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQ 159
S + +KI K + +N P Q+ D +VC + P +
Sbjct: 316 SEATVNVKIFQKLMFKNAPT---------PQEFKEGEDAVIVCDVVSSLP------PTII 450
Query: 160 W-YKDCKPLLLDNIHFSGVKDR-LIVMNVAEKHRGNYTCHASYTYLGK-QYPITRVIEFI 216
W +K +L ++ F + + L + + + G Y C G+ + +VI +
Sbjct: 451 WKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNV 630
Query: 217 TLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGE 276
PT S N T +LG + L+C+ G W +G I+ ++ E
Sbjct: 631 -----PPTVQARQSIVNAT--ANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEE----E 777
Query: 277 DYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQL 327
D S + ++ S+ +T+ N+ + + Y C A+N G A I L
Sbjct: 778 DERSRSSVSD---SSEVTIRNVDKNDEAEY----VCIAENKAGEQDASIHL 909
>gb|AF444783.1|AF444783 Anopheles gambiae Trex gene, complete cds
Length = 6629
Score = 45.8 bits (107), Expect = 0.011
Identities = 51/215 (23%), Positives = 98/215 (44%), Gaps = 8/215 (3%)
Frame = +2
Query: 344 TLTVIIVCSVFIYKI-------FKIDIVLWYRDSCYDFLPIKASDGKTYDAYILYPKTVG 396
+L +I+ +F+++ K + L+YR++ D K K +DA+I Y
Sbjct: 3512 SLVIILTLVLFVFRQEMRVWFHSKFGVRLFYRNADID----KNERDKLFDAFISY----- 3664
Query: 397 EGSTSDCDIFVFKVLPEVLEKQC-GYKLFIYGRDDYVGEDIVEVINENVKKSRRLIIILV 455
+S + FV + L +LE + YKL ++ RD VG I + I + V+ SRR I++L
Sbjct: 3665 ---SSKDEAFVAEELAPMLENEDPSYKLCLHYRDFPVGAYIADNILQAVESSRRTIMVLS 3835
Query: 456 RETSGFSWLGGSSEEQIAMYNALVQDGIKVVLLELEKIQDYEKMPESIKFIKQKHGAIRW 515
W E + A + L +++++ L ++ + P+ I+ + + ++W
Sbjct: 3836 ENFIKSEWC--RFEFKSAHHQVLRDRRRRLIVILLGEVPQKDLDPD-IRLYLKTNTYLQW 4006
Query: 516 SGDFTQGPQSAKTRFWKNVRYHMPVQRRSPSSKHQ 550
GD FW+ +R+ +P + +HQ
Sbjct: 4007 -GD---------KLFWEKLRFALPDVPNNQRRQHQ 4081
>dbj|AB007035.1|AB007035 Xenopus laevis mRNA for FGF receptor 3, complete cds
Length = 3261
Score = 45.8 bits (107), Expect = 0.011
Identities = 58/230 (25%), Positives = 97/230 (41%), Gaps = 17/230 (7%)
Frame = +1
Query: 153 NELPKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTYLGKQY 207
N P + W K+ K ++ G+K R L++ +V +GNYTC + +Y
Sbjct: 508 NPTPTIHWLKNGKEFRGEH-RIGGIKLRHQQWSLVMESVVPSDKGNYTC-----VVENKY 669
Query: 208 PITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW----K 261
R + + E RP++ + P N+T V LGS ++ C V W +
Sbjct: 670 GSIRQTYQLDVLERSSHRPILQAGLPGNQT--VVLGSDVEFHCKVYSDAQPHIQWLKHVE 843
Query: 262 WNGSVIDEDDPVLGEDYYSVENP--ANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 319
NGS D G+ Y SV + +++ N++E Y C A N G
Sbjct: 844 VNGSKYGPD----GDPYVSVLQSFINGTEVDSTLSLKNVTETNEGQY----VCRANNFIG 999
Query: 320 I-DAAYIQLIY---PVTNFQKHMIGICVTLTVIIVCSVFIYKIFKIDIVL 365
+ +A++ IY P +K + ++TV+IV + I I + IV+
Sbjct: 1000VAEASFWLHIYKPAPAEPVEKALTTSSSSITVLIVVTSTIVFILLVIIVI 1149
Score = 36.2 bits (82), Expect = 8.8
Identities = 49/190 (25%), Positives = 78/190 (40%), Gaps = 17/190 (8%)
Frame = +1
Query: 27 EEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPA 86
E+K+I V +AN I R CP N TI W K+ + +H++ + +
Sbjct: 445 EKKLIAVPAANTIRFR-CPAAGNPTP-TIHWLKNGKEFRGEHRIGGIKLRHQQWSLVMES 618
Query: 87 KV-EDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPY- 144
V D G+Y CVV N +R +E + + I + LP G+ +V
Sbjct: 619 VVPSDKGNYTCVVENKYGSIRQTYQLDVLERSSH-----RPILQAGLP--GNQTVVLGSD 777
Query: 145 MEFF-KNENNELPKLQWYKDCK--------------PLLLDNIHFSGVKDRLIVMNVAEK 189
+EF K ++ P +QW K + +L I+ + V L + NV E
Sbjct: 778 VEFHCKVYSDAQPHIQWLKHVEVNGSKYGPDGDPYVSVLQSFINGTEVDSTLSLKNVTET 957
Query: 190 HRGNYTCHAS 199
+ G Y C A+
Sbjct: 958 NEGQYVCRAN 987
>gb|U22324.1|MMU22324 Mus musculus fibroblast growth factor receptor-1 mRNA, long isoform
precursor, complete cds
Length = 2526
Score = 45.8 bits (107), Expect = 0.011
Identities = 48/178 (26%), Positives = 76/178 (41%), Gaps = 13/178 (7%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTY--LGKQYP 208
P L+W K+ K D+ G K R +I+ +V +GNYTC Y + Y
Sbjct: 613 PTLRWLKNGKEFKPDH-RIGGYKVRYATWSIIMDSVVPSDKGNYTCIVENEYGSINHTYQ 789
Query: 209 ITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW----KW 262
+ V E P RP++ + PANET V LGS ++ +C V W +
Sbjct: 790 LDVV-------ERSPHRPILQAGLPANET--VALGSNVEFMCKVYSDPQPHIQWLKHIEV 942
Query: 263 NGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGI 320
NGS I D+ + + + ++ + N+S ++ Y TC A N+ G+
Sbjct: 943 NGSKIGPDNLPYVQILKTAGVNTTDKEMEVLHLRNVSFEDAGEY----TCLAGNSIGL 1104
>ref|XM_090120.1| Homo sapiens similar to unnamed protein product (LOC160211), mRNA
Length = 2757
Score = 45.8 bits (107), Expect = 0.011
Identities = 58/239 (24%), Positives = 86/239 (35%), Gaps = 22/239 (9%)
Frame = +1
Query: 55 ITWYKDDSKTPVSTEQASRIHQHK--------------EKLWFVPAKVEDSGHYYCVVRN 100
+ W K+D + P E+ S + LW ED G Y CV N
Sbjct: 2023 LRWRKEDGELPTGREKGSVAVANPAWGGEWSRYEIRSDHSLWIGHVSAEDEGTYTCVAEN 2202
Query: 101 SSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQW 160
S R + S + P Q + + + +A G V E + N P + W
Sbjct: 2203 SVG--RAEASGSLSVHVP-----PQLVTQPQDQMAAPGESVAFQCE---TKGNPPPAIFW 2352
Query: 161 YKDCKPLLLDNIHFSGVKDRLIV-----MNVAEKHRGN---YTCHASYTYLGKQYPITRV 212
K+ +LL R V +N+ RG+ Y C A
Sbjct: 2353 QKEGSQVLLFPSQSLQPTGRFSVSPRGQLNITAVQRGDAGYYVCQAVSVAGSILAKALLE 2532
Query: 213 IEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDD 271
I+ +L+ P ++ PAN+T+ LGS + L C VTG WK +G + DD
Sbjct: 2533 IKGASLDGLPPV--ILQGPANQTLV--LGSSVWLPCRVTGNPQPSVRWKKDGQWLQGDD 2697
>gb|L19869.1|NVI2FGFR Notophthalmus viridescens fibroblast growth factor receptor 2
(FGFR2) mRNA, complete cds
Length = 2675
Score = 45.8 bits (107), Expect = 0.011
Identities = 49/183 (26%), Positives = 77/183 (41%), Gaps = 15/183 (8%)
Frame = +1
Query: 153 NELPKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTYLGKQY 207
N P ++W K+ K ++ G K R LI+ +V GNYTC + +Y
Sbjct: 604 NPTPSMRWLKNGKEFKQEH-RIGGFKVRSQHFSLIMESVVPSDEGNYTC-----IMENEY 765
Query: 208 PITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTG----QLSDIAYWK 261
+ + E P RP++ + PAN T +V G + +C V + I +++
Sbjct: 766 GSINHTYHLDVVERSPHRPILQAGLPANTTTKV--GGDAEFVCKVYSDAQPHIQWIRHFE 939
Query: 262 WNGSVIDEDDPVLGEDYYSVENPA----NKRRSTLITVLNISEIESRFYKHPFTCFAKNT 317
NGS I D G Y V A + ++ V N+S ++ Y TC A N+
Sbjct: 940 LNGSKIGPD----GHPYLKVLKAAGVNTTDKEIEVLYVRNVSFEDAGEY----TCLAGNS 1095
Query: 318 HGI 320
GI
Sbjct: 1096TGI 1104
>gb|U23445.1|MMU23445 Mus musculus fibroblast growth factor receptor-1, short isoform
precursor mRNA, complete cds
Length = 2259
Score = 45.8 bits (107), Expect = 0.011
Identities = 48/178 (26%), Positives = 76/178 (41%), Gaps = 13/178 (7%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTY--LGKQYP 208
P L+W K+ K D+ G K R +I+ +V +GNYTC Y + Y
Sbjct: 346 PTLRWLKNGKEFKPDH-RIGGYKVRYATWSIIMDSVVPSDKGNYTCIVENEYGSINHTYQ 522
Query: 209 ITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW----KW 262
+ V E P RP++ + PANET V LGS ++ +C V W +
Sbjct: 523 LDVV-------ERSPHRPILQAGLPANET--VALGSNVEFMCKVYSDPQPHIQWLKHIEV 675
Query: 263 NGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGI 320
NGS I D+ + + + ++ + N+S ++ Y TC A N+ G+
Sbjct: 676 NGSKIGPDNLPYVQILKTAGVNTTDKEMEVLHLRNVSFEDAGEY----TCLAGNSIGL 837
>gb|M63889.1|HUMHBGFC Human heparin-binding growth factor receptor (HBGF-R-alpha-a3)
mRNA, complete cds
Length = 1608
Score = 45.4 bits (106), Expect = 0.015
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTY--LGKQYP 208
P L+W K+ K D+ G K R +I+ +V +GNYTC Y + Y
Sbjct: 433 PTLRWLKNGKEFKPDH-RIGGYKVRYATWSIIMDSVVPSDKGNYTCIVENEYGSINHTYQ 609
Query: 209 ITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW----KW 262
+ V E P RP++ + PAN+T V LGS ++ +C V W +
Sbjct: 610 LDVV-------ERSPHRPILQAGLPANKT--VALGSNVEFMCKVYSDPQPHIQWLKHIEV 762
Query: 263 NGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGI 320
NGS I D+ + + + ++ + N+S ++ Y TC A N+ G+
Sbjct: 763 NGSKIGPDNLPYAQILKTAGVNTTDKEMEVLHLRNVSFEDAGEY----TCLAGNSIGL 924
>ref|XM_078938.1| echinoid, mRNA
Length = 5177
Score = 45.4 bits (106), Expect = 0.015
Identities = 51/231 (22%), Positives = 93/231 (40%), Gaps = 17/231 (7%)
Frame = +3
Query: 54 TITWYKDDSKTPVST---EQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKIS 110
TITWY++ S TP+ + ++ L +P + +D Y CVVRN R
Sbjct: 963 TITWYREGSNTPLPATVLKGGTKDQPTNATLSIIPRREDDGAKYKCVVRN-----RAMNE 1127
Query: 111 AKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENN-----ELPKLQWYKDCK 165
K +E L N + ++ V + L K E N ++P ++W ++ +
Sbjct: 1128 GKRLEATATLNVN----YYPRVEVGPENPLRVERDRTAKLECNVDAKPKVPNVRWNRNGR 1295
Query: 166 PLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTR 225
+ +H + V+ + G YTC A LGK +++ +
Sbjct: 1296 FISSSLVH--------TIHRVSVQDAGKYTCIAD-NGLGKTGEQELILDIL--------Y 1424
Query: 226 PVIVSPANETMEVDLGSQIQLICNVTGQLSDIAY---------WKWNGSVI 267
P +V ++T E + G + + CNVT + + +++NG V+
Sbjct: 1425 PPMVVIESKTREAEEGDTVTIRCNVTANPAPVTIEWLKENSPDFRYNGDVL 1577
>emb|X74332.1|PWFGFR2 P.waltl mRNA for fibroblast growth factor receptor 2
Length = 2967
Score = 45.4 bits (106), Expect = 0.015
Identities = 49/182 (26%), Positives = 75/182 (40%), Gaps = 14/182 (7%)
Frame = +1
Query: 153 NELPKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTYLGKQY 207
N LP ++W K+ K ++ G K R LI+ +V +GNYTC + +Y
Sbjct: 547 NPLPSMRWLKNGKEFKQEH-RIGGFKVRSQHWSLIMESVVPSDKGNYTC-----IMENEY 708
Query: 208 PITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYWK---W 262
+ + E P P++ + PAN T +V G + +C V W+
Sbjct: 709 GSINHTYHLDVVERSPHPPILQAGLPANTTTKV--GGDREFVCKVYSDAQPHIQWRHIEL 882
Query: 263 NGSVIDEDDPVLGEDYYSVENPANKRRST----LITVLNISEIESRFYKHPFTCFAKNTH 318
NGS I D G Y V A + ++ V N+S ++ Y TC A N+
Sbjct: 883 NGSKIGPD----GNPYLKVLKAAGGNTTVKEIEVLYVRNVSFEDAGEY----TCLAGNSI 1038
Query: 319 GI 320
GI
Sbjct: 1039GI 1044
>ref|NM_023109.1| Homo sapiens fibroblast growth factor receptor 1 (fms-related
tyrosine kinase 2, Pfeiffer syndrome) (FGFR1), transcript
variant 7, mRNA
Length = 4066
Score = 45.4 bits (106), Expect = 0.015
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTY--LGKQYP 208
P L+W K+ K D+ G K R +I+ +V +GNYTC Y + Y
Sbjct: 1282 PTLRWLKNGKEFKPDH-RIGGYKVRYATWSIIMDSVVPSDKGNYTCIVENEYGSINHTYQ 1458
Query: 209 ITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW----KW 262
+ V E P RP++ + PAN+T V LGS ++ +C V W +
Sbjct: 1459 LDVV-------ERSPHRPILQAGLPANKT--VALGSNVEFMCKVYSDPQPHIQWLKHIEV 1611
Query: 263 NGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGI 320
NGS I D+ + + + ++ + N+S ++ Y TC A N+ G+
Sbjct: 1612 NGSKIGPDNLPYAQILKTAGVNTTDKEMEVLHLRNVSFEDAGEY----TCLAGNSIGL 1773
>gb|M63887.1|HUMHBGFA Human heparin-binding growth factor receptor (HBGF-R-alpha-a1)
mRNA, complete cds
Length = 3198
Score = 45.4 bits (106), Expect = 0.015
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTY--LGKQYP 208
P L+W K+ K D+ G K R +I+ +V +GNYTC Y + Y
Sbjct: 556 PTLRWLKNGKEFKPDH-RIGGYKVRYATWSIIMDSVVPSDKGNYTCIVENEYGSINHTYQ 732
Query: 209 ITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW----KW 262
+ V E P RP++ + PAN+T V LGS ++ +C V W +
Sbjct: 733 LDVV-------ERSPHRPILQAGLPANKT--VALGSNVEFMCKVYSDPQPHIQWLKHIEV 885
Query: 263 NGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGI 320
NGS I D+ + + + ++ + N+S ++ Y TC A N+ G+
Sbjct: 886 NGSKIGPDNLPYAQILKTAGVNTTDKEMEVLHLRNVSFEDAGEY----TCLAGNSIGL 1047
>emb|X61992.1|GGBEK G.gallus mRNA bek for receptor tyrosine kinase
Length = 2621
Score = 45.4 bits (106), Expect = 0.015
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 13/188 (6%)
Frame = +2
Query: 132 LPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNV 186
+P A CP M N P ++W K+ K ++ G K R LI+ +V
Sbjct: 611 VPAANTVKFRCPAM------GNPTPTMRWLKNGKEFKQEH-RIGGYKVRNQHWSLIMESV 769
Query: 187 AEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQI 244
+GNYTC + QY + + E P RP++ + PAN + V G +
Sbjct: 770 VPSDKGNYTC-----IVENQYGSINHTYHLDVVERSPHRPILQAGLPANASAVV--GGDV 928
Query: 245 QLICNVTGQLSDIAYW----KWNGSVIDEDDPVLGEDYYSV--ENPANKRRSTLITVLNI 298
+ +C V W + NGS D G Y V + N + ++T+ N+
Sbjct: 929 EFVCKVYSDAQPHIQWIKHVERNGSKYGPD----GLPYLQVLKHSGINSSNAEVLTLYNV 1096
Query: 299 SEIESRFY 306
+E ++ Y
Sbjct: 1097TEADAGEY 1120
Score = 37.4 bits (85), Expect = 4.0
Identities = 54/206 (26%), Positives = 79/206 (38%), Gaps = 27/206 (13%)
Frame = +2
Query: 27 EEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEK-----L 81
E+++ V +AN + R CP N T+ W K+ + +Q RI +K + L
Sbjct: 593 EKRLHAVPAANTVKFR-CPAMGNPTP-TMRWLKNGKEF----KQEHRIGGYKVRNQHWSL 754
Query: 82 WFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPN-------LCYNAQAIFKQKLPV 134
D G+Y C+V N + VE P+ L NA A+ V
Sbjct: 755 IMESVVPSDKGNYTCIVENQYGSINHTYHLDVVERSPHRPILQAGLPANASAV------V 916
Query: 135 AGDGGLVCPYMEFFKNENNELPKLQWYK-----------DCKPLLLDNIHFSGVK----D 179
GD VC K ++ P +QW K D P L + SG+ +
Sbjct: 917 GGDVEFVC------KVYSDAQPHIQWIKHVERNGSKYGPDGLP-YLQVLKHSGINSSNAE 1075
Query: 180 RLIVMNVAEKHRGNYTCHASYTYLGK 205
L + NV E G Y C S Y+G+
Sbjct: 1076VLTLYNVTEADAGEYICKVS-NYIGE 1150
>gb|M63888.1|HUMHBGFBV Human heparin-binding growth factor receptor (HBGF-R-alpha-a2)
mRNA, complete cds
Length = 3223
Score = 45.4 bits (106), Expect = 0.015
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTY--LGKQYP 208
P L+W K+ K D+ G K R +I+ +V +GNYTC Y + Y
Sbjct: 556 PTLRWLKNGKEFKPDH-RIGGYKVRYATWSIIMDSVVPSDKGNYTCIVENEYGSINHTYQ 732
Query: 209 ITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW----KW 262
+ V E P RP++ + PAN+T V LGS ++ +C V W +
Sbjct: 733 LDVV-------ERSPHRPILQAGLPANKT--VALGSNVEFMCKVYSDPQPHIQWLKHIEV 885
Query: 263 NGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGI 320
NGS I D+ + + + ++ + N+S ++ Y TC A N+ G+
Sbjct: 886 NGSKIGPDNLPYAQILKTAGVNTTDKEMEVLHLRNVSFEDAGEY----TCLAGNSIGL 1047
>ref|NM_078745.1| Drosophila melanogaster echinoid (ed), mRNA
Length = 5201
Score = 45.4 bits (106), Expect = 0.015
Identities = 51/231 (22%), Positives = 93/231 (40%), Gaps = 17/231 (7%)
Frame = +2
Query: 54 TITWYKDDSKTPVST---EQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKIS 110
TITWY++ S TP+ + ++ L +P + +D Y CVVRN R
Sbjct: 971 TITWYREGSNTPLPATVLKGGTKDQPTNATLSIIPRREDDGAKYKCVVRN-----RAMNE 1135
Query: 111 AKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENN-----ELPKLQWYKDCK 165
K +E L N + ++ V + L K E N ++P ++W ++ +
Sbjct: 1136 GKRLEATATLNVN----YYPRVEVGPENPLRVERDRTAKLECNVDAKPKVPNVRWNRNGR 1303
Query: 166 PLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTR 225
+ +H + V+ + G YTC A LGK +++ +
Sbjct: 1304 FISSSLVH--------TIHRVSVQDAGKYTCIAD-NGLGKTGEQELILDIL--------Y 1432
Query: 226 PVIVSPANETMEVDLGSQIQLICNVTGQLSDIAY---------WKWNGSVI 267
P +V ++T E + G + + CNVT + + +++NG V+
Sbjct: 1433 PPMVVIESKTREAEEGDTVTIRCNVTANPAPVTIEWLKENSPDFRYNGDVL 1585
>gb|AF275903.1|AF275903 Drosophila melanogaster echinoid (ed) mRNA, complete cds
Length = 5201
Score = 45.4 bits (106), Expect = 0.015
Identities = 51/231 (22%), Positives = 93/231 (40%), Gaps = 17/231 (7%)
Frame = +2
Query: 54 TITWYKDDSKTPVST---EQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKIS 110
TITWY++ S TP+ + ++ L +P + +D Y CVVRN R
Sbjct: 971 TITWYREGSNTPLPATVLKGGTKDQPTNATLSIIPRREDDGAKYKCVVRN-----RAMNE 1135
Query: 111 AKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENN-----ELPKLQWYKDCK 165
K +E L N + ++ V + L K E N ++P ++W ++ +
Sbjct: 1136 GKRLEATATLNVN----YYPRVEVGPENPLRVERDRTAKLECNVDAKPKVPNVRWNRNGR 1303
Query: 166 PLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTR 225
+ +H + V+ + G YTC A LGK +++ +
Sbjct: 1304 FISSSLVH--------TIHRVSVQDAGKYTCIAD-NGLGKTGEQELILDIL--------Y 1432
Query: 226 PVIVSPANETMEVDLGSQIQLICNVTGQLSDIAY---------WKWNGSVI 267
P +V ++T E + G + + CNVT + + +++NG V+
Sbjct: 1433 PPMVVIESKTREAEEGDTVTIRCNVTANPAPVTIEWLKENSPDFRYNGDVL 1585
>ref|NM_024146.1| Rattus norvegicus FGF receptor-1 (Fgfr1), mRNA
Length = 2469
Score = 45.1 bits (105), Expect = 0.019
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTY--LGKQYP 208
P L+W K+ K D+ G K R +I+ +V +GNYTC Y + Y
Sbjct: 556 PTLRWLKNGKEFKPDH-RIGGYKVRYATWSIIMDSVVPSDKGNYTCIVENEYGSINHTYQ 732
Query: 209 ITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW----KW 262
+ V E P RP++ + PAN+T V LGS ++ +C V W +
Sbjct: 733 LDVV-------ERSPHRPILQAGLPANKT--VALGSNVEFMCKVYSDPQPHIQWLKHIEV 885
Query: 263 NGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGI 320
NGS I D+ + + + ++ + N+S ++ Y TC A N+ G+
Sbjct: 886 NGSKIGPDNLPYDQILKTAGVNTTDKEMEVLHLRNVSFEDAGEY----TCLAGNSIGL 1047
>dbj|D12498.1|RATFGFR1 Rat mRNA for FGF receptor-1, complete cds
Length = 2469
Score = 45.1 bits (105), Expect = 0.019
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Frame = +1
Query: 156 PKLQWYKDCKPLLLDNIHFSGVKDR-----LIVMNVAEKHRGNYTCHASYTY--LGKQYP 208
P L+W K+ K D+ G K R +I+ +V +GNYTC Y + Y
Sbjct: 556 PTLRWLKNGKEFKPDH-RIGGYKVRYATWSIIMDSVVPSDKGNYTCIVENEYGSINHTYQ 732
Query: 209 ITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQLSDIAYW----KW 262
+ V E P RP++ + PAN+T V LGS ++ +C V W +
Sbjct: 733 LDVV-------ERSPH