TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(1066 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,174,033 sequences; 576,412,323 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_003373.2| Homo sapiens vinculin (VCL), transcript va... 1870 0.0
gb|M33308.1|HUMVINC Human vinculin mRNA, complete cds 1870 0.0
gb|AF165172.1|AF165172 Sus scrofa vinculin mRNA, complete cds 1863 0.0
gb|BC008520.1|BC008520 Mus musculus, vinculin, clone MGC:61... 1863 0.0
ref|NM_009502.1| Mus musculus vinculin (Vcl), mRNA 1854 0.0
gb|L18880.1|MUSVINCULX Mus musculus vinculin mRNA, complete... 1854 0.0
gb|J04126.1|CHKVINX Chicken vinculin mRNA, complete cds 1801 0.0
ref|NM_014000.1| Homo sapiens vinculin (VCL), transcript va... 1755 0.0
emb|Y00312.1|GGVINCR Chick mRNA for vinculin 1464 0.0
gb|BC008554.1|BC008554 Mus musculus, Similar to vinculin, c... 633 e-179
ref|NM_057472.1| Drosophila melanogaster Vinculin (Vinc), t... 379 e-103
ref|NM_068703.1| Caenorhabditis elegans 364 2e-98
gb|U07023.1|BMU07023 Brugia malayi vinculin mRNA, complete cds 362 1e-97
gb|AE003423.1|AE003423 Drosophila melanogaster genomic scaf... 348 2e-93
ref|NG_000237.1| Drosophila melanogaster Vinculin (Vinc) on... 348 2e-93
emb|AL009193.1|DMC103B4 Drosophila melanogaster cosmid clon... 348 2e-93
gb|AC104149.6| Drosophila melanogaster X BAC RP98-48O22 (Ro... 348 2e-93
emb|X96601.1|DMVIN D.melanogaster vinculin gene 345 1e-92
emb|Z19540.1|SSMTVINA S.scrofa metavinculin cDNA 322 1e-85
emb|Z19541.1|XLMTVINA X.laevis metavinculin cDNA 321 2e-85
gb|AC084630.1|CBRG45E13 Caenorhabditis briggsae cosmid G45E... 246 7e-63
ref|NM_068704.1| Caenorhabditis elegans 213 1e-52
dbj|D25281.1|MUSANCI Mouse mRNA for alpha N-catenin I, comp... 164 5e-38
dbj|D11090.1|CHKANC Chicken mRNA for alpha N-catenin, compl... 161 4e-37
gb|U34687.1|LVU34687 Lytechinus variegatus alpha catenin mR... 158 3e-36
gb|BC000385.1|BC000385 Homo sapiens, clone MGC:8429 IMAGE:2... 156 1e-35
dbj|D90362.1|MUSCAP102 Mouse mRNA for cadherin-associated p... 156 1e-35
dbj|D13866.1|HUMACA Human mRNA for alpha-catenin, complete cds 156 1e-35
ref|XM_038221.1| Homo sapiens catenin (cadherin-associated ... 156 1e-35
ref|NM_009818.1| Mus musculus catenin alpha 1 (Catna1), mRNA 156 1e-35
emb|X59990.1|MMALPA M.musculus alpha-catenin gene for alpha... 156 1e-35
dbj|AK004623.1|AK004623 Mus musculus adult male lung cDNA, ... 156 1e-35
dbj|D14705.1|HUMALPHAC Human mRNA for alpha-catenin, comple... 154 4e-35
ref|NM_004389.1| Homo sapiens catenin (cadherin-associated ... 154 5e-35
gb|M94151.2|HUMCAPR Homo sapiens cadherin-associated protei... 154 5e-35
gb|U47624.1|XLU47624 Xenopus laevis alpha(E)-catenin mRNA, ... 154 5e-35
ref|NM_009819.1| Mus musculus catenin alpha 2 (Catna2), mRNA 153 8e-35
dbj|D25282.1|MUSANCII Mouse mRNA for alpha N-catenin II, co... 153 8e-35
gb|AF099737.1|AF099737 Danio rerio cell-adhesion protein al... 153 1e-34
ref|NM_001903.1| Homo sapiens catenin (cadherin-associated ... 147 8e-33
gb|L23805.1|HUMCATENIN Human alpha1(E)-catenin mRNA, comple... 147 8e-33
ref|XM_010873.4| Homo sapiens catenin (cadherin-associated ... 145 3e-32
ref|NM_079495.1| Drosophila melanogaster alpha Catenin (alp... 143 8e-32
dbj|D13964.2|DROALPC Drosophila melanogaster mRNA for alpha... 143 8e-32
ref|NM_013266.1| Homo sapiens alpha-catenin-like protein (V... 143 1e-31
gb|AF091606.1|AF091606 Homo sapiens alpha-catenin-like prot... 143 1e-31
gb|AY051780.1| Drosophila melanogaster LD30423 full length ... 143 1e-31
dbj|AB041262.1|AB041262 Mus musculus mRNA for vinculin, par... 142 2e-31
gb|U40802.2| Caenorhabditis elegans cosmid ZC477, complete ... 139 2e-30
gb|J04804.1|CELDEB1A C.elegans vinculin (deb-1) gene, compl... 139 2e-30
gb|U03100.1|HSU03100 Human alpha2(E)-catenin mRNA, complete... 137 8e-30
gb|S87223.1|S87218S3 vinculin [human, Genomic, 434 nt, segm... 132 1e-28
gb|S87180.1|S87175S3 meta-vinculin=muscle-specific variant ... 132 1e-28
gb|AF016852.1|AF016852 Caenorhabditis elegans HMP-1 mRNA, c... 122 2e-25
ref|NM_073584.1| alpha-catenin 122 2e-25
gb|L04933.1|HUMVCLX Human vinculin (VCL) gene exon 1, 5' end 112 2e-22
gb|S52276.1|S52270S4 vinculin=talin-binding cytoskeletal pr... 107 7e-21
gb|L13299.1|MUSVIN01 Mus musculus vinculin gene, exon 3 103 7e-20
gb|S52270.1|S52270S1 vinculin=talin-binding cytoskeletal pr... 101 4e-19
gb|BC013847.1|BC013847 Homo sapiens, clone IMAGE:4387297, mRNA 84 8e-14
gb|S52272.1|S52270S3 vinculin=talin-binding cytoskeletal pr... 83 1e-13
gb|AC010027.5| Drosophila melanogaster 3L BAC RP98-22B15 (R... 80 1e-12
gb|AE002656.1|AE002656 Drosophila melanogaster genomic scaf... 80 1e-12
ref|XM_045972.5| Homo sapiens alpha-catenin-like protein (V... 79 3e-12
gb|S52271.1|S52270S2 vinculin=talin-binding cytoskeletal pr... 77 1e-11
gb|L13300.1|MUSVIN02 Mus musculus vinculin gene, exon 4 77 1e-11
gb|AC024780.1|AC024780 Caenorhabditis elegans cosmid Y43B11... 75 4e-11
emb|Z81579.1|CER13H4 Caenorhabditis elegans cosmid R13H4, c... 72 4e-10
gb|BC020328.1|BC020328 Mus musculus, clone IMAGE:4020609, mRNA 69 3e-09
gb|BC022004.1|BC022004 Homo sapiens, Similar to alpha-caten... 61 5e-07
gb|S87218.1|S87218S1 vinculin [human, Genomic, 260 nt, segm... 60 9e-07
gb|S87175.1|S87175S1 meta-vinculin=muscle-specific variant ... 60 9e-07
emb|Z37994.1|HSCTNNA1P H.sapiens alpha E-catenin pseudogene 53 2e-04
emb|X80168.1|SPEMM3G S.pyogenes emm3 gene 46 0.018
ref|NM_017240.1| Rattus norvegicus myosin heavy chain, card... 46 0.018
emb|X15939.1|RNMHCB Rat mRNA for beta cardiac myosin heavy ... 46 0.018
gb|M18269.1|STR12M S.pyogenes surface protein M type 12 (em... 46 0.024
emb|X07273.1|MAMYOBH Hamster mRNA for cardiac beta-myosin h... 45 0.031
gb|AE004993.1|AE004993 Halobacterium sp. NRC-1 section 24 o... 45 0.031
emb|X62467.1|SSPFCRV S.sp (valente) fcrV gene 45 0.031
emb|Z32677.1|SSMLC36 Streptococcus sp. group C (C36) MLC36 ... 45 0.031
gb|AE004844.1|AE004844 Pseudomonas aeruginosa PA01, section... 45 0.041
dbj|AB015484.1|AB015484 Dugesia japonica mRNA for myosin he... 44 0.091
gb|AC084674.1|CBRG47I21 Caenorhabditis briggsae cosmid G47I... 44 0.12
gb|M20374.1|STRSMP5A S.pyogenes smp5 gene encoding serotype... 44 0.12
emb|X60098.1|SSGEMM Streptococcus sp. (group G) emm gene fo... 44 0.12
emb|Z32678.1|SSMLG72 Streptococcus sp. group G (G72) MLG72 ... 44 0.12
emb|X78484.1|SPFCRA78 S.pyogenes (strain M8-4025) FcrA8 gen... 44 0.12
gb|BC004165.1|BC004165 Homo sapiens, Similar to nuclear mit... 44 0.12
ref|XM_033374.1| Homo sapiens myosin, heavy polypeptide 7, ... 43 0.15
ref|NM_000257.1| Homo sapiens myosin, heavy polypeptide 7, ... 43 0.15
gb|M58018.1|HUMBMYH7CD Homo sapiens beta-myosin heavy chain... 43 0.15
dbj|AB053226.1|AB053226 Sus scrofa MyHC-slow mRNA for myosi... 43 0.15
emb|X06976.1|HSMYOBH Human mRNA for cardiac beta myosin hea... 43 0.15
emb|X03741.1|HSMYH2R Human cardiac mRNA for myosin heavy ch... 43 0.15
gb|M17712.1|HUMMYH Human cardiac myosin heavy chain mRNA, 3... 43 0.15
gb|M21665.1|HUMMYHC5 Human beta-myosin heavy chain mRNA, 3'... 43 0.15
dbj|AB016537.3|AB016537 Streptococcus pyogenes genes for OR... 43 0.20
gb|U02480.1|SPU02480 Streptococcus pyogenes NCTC8193 antiph... 43 0.20
gb|AF229810.1|AF229810 Felis catus slow myosin heavy chain ... 43 0.20
emb|X51591.1|HSBMHCV Human beta-MHC mRNA for beta myosin he... 43 0.20
gb|M11338.1|STRM6 Streptococcus pyogenes emm6 gene coding f... 42 0.26
gb|U39838.1|SPU39838 Streptococcus pyogenes M protein (emm1... 42 0.34
gb|AY056464.1| Mus musculus beta myosin heavy chain mRNA, c... 42 0.34
emb|AJ243767.1|NCO243767 Notothenia coriiceps mRNA for fast... 42 0.34
gb|U75316.1|SSU75316 Sus scrofa beta-myosin heavy chain mRN... 42 0.34
emb|X81475.1|MHLMP M.hominis lmp1 and lmp2 genes 42 0.34
dbj|AK055751.1|AK055751 Homo sapiens cDNA FLJ31189 fis, clo... 42 0.34
gb|J04669.1|TCSTROP Nematode muscle tropomyosin mRNA, compl... 42 0.34
gb|AF324061.1|AF324061 Streptococcus pyogenes IgG Fc recept... 42 0.45
emb|X91846.1|SSMYHCC Sus scrofa mRNA for cardiac myosin hea... 42 0.45
dbj|D38541.1|CELTMY1C Caenorhabditis elegans mRNA tmy-1 for... 41 0.59
dbj|D38540.1|CELTMY1B Caenorhabditis elegans tmy-1 mRNA for... 41 0.59
dbj|AB032020.1|AB032020 Seriola dumerilii mRNA for myosin h... 41 0.77
emb|X95601.1|MHLMP34GN M.hominis lmp3 and lmp4 genes 41 0.77
emb|X60097.1|SSCEMM Streptococcus sp. (group C) emm gene fo... 41 0.77
gb|AF097904.1|AF097904 Rana catesbeiana myosin heavy chain ... 40 1.0
dbj|AB059400.1|AB059400 Bos taurus MyHC-slow mRNA for myosi... 40 1.0
gb|S75411.1|S75411 vir regulon: mry15=Mry homolog...scpA15=... 40 1.0
emb|AJ319534.1|SPY319534 Streptococcus pyogenes partial emm... 40 1.0
dbj|AB000214.1|AB000214 Theragra chalcogramma mRNA for myos... 40 1.7
gb|U21963.1|MHU21963 Mycoplasma hominis Mh81 Lmp1 (lmp1) ge... 40 1.7
ref|NM_073088.1| Caenorhabditis elegans 40 1.7
gb|J00752.1|RATMYHCB Rat cardiac myosin heavy chain insert ... 40 1.7
gb|U21962.1|MHU21962 Mycoplasma hominis Mh56 Lmp1 (lmp1) ge... 40 1.7
ref|NM_061137.1| Caenorhabditis elegans 40 1.7
ref|NM_061136.1| Caenorhabditis elegans 40 1.7
gb|M19932.1|BABBMYHA Baboon beta-myosin heavy-chain mRNA, p... 40 1.7
emb|X60959.1|SPEMM57 S.pyogenes emm57 gene for M57 protein 40 1.7
gb|AF006665.1|AF006665 Bacillus subtilis 168 region at 182 ... 39 2.2
gb|AE006012.1|AE006012 Caulobacter crescentus section 338 ... 39 2.2
gb|AC084652.1|CBRG45O11 Caenorhabditis briggsae cosmid G45O... 39 2.2
emb|Z99114.1|BSUB0011 Bacillus subtilis complete genome (se... 39 2.2
gb|AF015775.1|AF015775 Bacillus subtilis YodA (yodA), YodB ... 39 2.2
ref|NM_017239.1| Rattus norvegicus myosin heavy chain, card... 39 2.9
emb|X15938.1|RNMHCA Rat mRNA for alpha cardiac myosin heavy... 39 2.9
ref|XM_045378.2| Homo sapiens hypothetical protein FLJ14957... 39 2.9
emb|Z22219.1|SPPAMPR S.pyogenes PAM protein gene 39 3.8
gb|M95774.1|STRMPROTN Group G streptococci M protein gene, ... 39 3.8
emb|X58179.1|SPEMM52 S.pyogenes for emm52 gene 39 3.8
emb|X72932.1|SPEMMFCR S.pyogenes genes for Fcr protein and ... 39 3.8
emb|X69325.1|MVATI Mousepox virus ATI gene for A-type inclu... 38 5.0
dbj|AP001508.1|AP001508 Bacillus halodurans genomic DNA, se... 38 5.0
gb|AC008067.3|AC008067 Homo sapiens BAC clone RP11-303I4 fr... 38 6.5
emb|AJ243770.1|PFO243770 Paracirrhites forsteri mRNA for fa... 38 6.5
emb|AL662833.4| Human DNA sequence from clone XXbac-101P6 o... 37 8.5
gb|AC004195.1|AC004195 Homo sapiens clone UWGC:y24c027 from... 37 8.5
gb|AE006624.1|AE006624 Streptococcus pyogenes M1 GAS strain... 37 8.5
gb|U26458.1|SRU26458 Snakehead retrovirus (SnRV), complete ... 37 8.5
gb|U65899.1|SPU65899 Streptococcus pyogenes M protein gene,... 37 8.5
dbj|AP000509.1|AP000509 Homo sapiens genomic DNA, chromosom... 37 8.5
gb|U29585.1|SPU29585 Streptococcus pyogenes emm18.1 gene, c... 37 8.5
dbj|AB023059.1|AB023059 Homo sapiens genomic DNA, chromosom... 37 8.5
ref|XM_087932.1| Homo sapiens hypothetical gene supported b... 37 8.5
>ref|NM_003373.2| Homo sapiens vinculin (VCL), transcript variant VCL, mRNA
Length = 5137
Score = 1870 bits (4844), Expect = 0.0
Identities = 990/1066 (92%), Positives = 990/1066 (92%)
Frame = +2
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
Sbjct: 86 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 265
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
Sbjct: 266 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 445
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
Sbjct: 446 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 625
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
Sbjct: 626 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 805
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR 300
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR
Sbjct: 806 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR 985
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL 360
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL
Sbjct: 986 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL 1165
Query: 361 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 420
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
Sbjct: 1166 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 1345
Query: 421 LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
Sbjct: 1346 LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 1525
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
Sbjct: 1526 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 1705
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS 600
LLAKCDRV RGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS
Sbjct: 1706 LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS 1885
Query: 601 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTVEG 660
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHS STVEG
Sbjct: 1886 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGKLGATAEKAAAVGTANKSTVEG 2065
Query: 661 IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 720
IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
Sbjct: 2066 IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 2245
Query: 721 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 780
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
Sbjct: 2246 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 2425
Query: 781 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXX 840
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA
Sbjct: 2426 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP 2605
Query: 841 XXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMM 900
RLTDELA QKAGEVINQPMMM
Sbjct: 2606 DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM 2785
Query: 901 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 960
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
Sbjct: 2786 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 2965
Query: 961 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 1020
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
Sbjct: 2966 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 3145
Query: 1021 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 3146 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 3283
>gb|M33308.1|HUMVINC Human vinculin mRNA, complete cds
Length = 5102
Score = 1870 bits (4844), Expect = 0.0
Identities = 990/1066 (92%), Positives = 990/1066 (92%)
Frame = +3
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
Sbjct: 51 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 230
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
Sbjct: 231 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 410
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
Sbjct: 411 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 590
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
Sbjct: 591 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 770
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR 300
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR
Sbjct: 771 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR 950
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL 360
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL
Sbjct: 951 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL 1130
Query: 361 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 420
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
Sbjct: 1131 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 1310
Query: 421 LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
Sbjct: 1311 LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 1490
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
Sbjct: 1491 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 1670
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS 600
LLAKCDRV RGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS
Sbjct: 1671 LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS 1850
Query: 601 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTVEG 660
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHS STVEG
Sbjct: 1851 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGKLGATAEKAAAVGTANKSTVEG 2030
Query: 661 IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 720
IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
Sbjct: 2031 IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 2210
Query: 721 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 780
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
Sbjct: 2211 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 2390
Query: 781 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXX 840
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA
Sbjct: 2391 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP 2570
Query: 841 XXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMM 900
RLTDELA QKAGEVINQPMMM
Sbjct: 2571 DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM 2750
Query: 901 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 960
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
Sbjct: 2751 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 2930
Query: 961 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 1020
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
Sbjct: 2931 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 3110
Query: 1021 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 3111 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 3248
>gb|AF165172.1|AF165172 Sus scrofa vinculin mRNA, complete cds
Length = 5200
Score = 1863 bits (4826), Expect = 0.0
Identities = 988/1067 (92%), Positives = 990/1067 (92%), Gaps = 1/1067 (0%)
Frame = +1
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
Sbjct: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 180
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
Sbjct: 181 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 360
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
Sbjct: 361 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 540
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
Sbjct: 541 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 720
Query: 241 INEIIRVLQLTSWDEDAWASK-DTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAI 299
INEIIRVLQLTSWDEDAWASK DTEAMKRALASIDSKLNQAKGWLRDP+ASPGDAGEQAI
Sbjct: 721 INEIIRVLQLTSWDEDAWASKKDTEAMKRALASIDSKLNQAKGWLRDPTASPGDAGEQAI 900
Query: 300 RQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQG 359
RQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQG+SPVAMQKAQQVSQG
Sbjct: 901 RQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQG 1080
Query: 360 LDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIA 419
LDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIA
Sbjct: 1081 LDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIA 1260
Query: 420 ELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNR 479
ELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNR
Sbjct: 1261 ELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNR 1440
Query: 480 AVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQ 539
AVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQ
Sbjct: 1441 AVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQ 1620
Query: 540 DLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVF 599
DLLAKCDRV RGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVF
Sbjct: 1621 DLLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVF 1800
Query: 600 SDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTVE 659
SDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHS STVE
Sbjct: 1801 SDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVE 1980
Query: 660 GIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT 719
GIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
Sbjct: 1981 GIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT 2160
Query: 720 KSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKF 779
KSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
Sbjct: 2161 KSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKF 2340
Query: 780 REAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXX 839
REAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA
Sbjct: 2341 REAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQE 2520
Query: 840 XXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMM 899
RLTDELA QKAGEVINQPMM
Sbjct: 2521 PDFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMM 2700
Query: 900 MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASD 959
MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASD
Sbjct: 2701 MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASD 2880
Query: 960 EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQA 1019
EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQA
Sbjct: 2881 EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQA 3060
Query: 1020 TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 3061 TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 3201
>gb|BC008520.1|BC008520 Mus musculus, vinculin, clone MGC:6134 IMAGE:3495710, mRNA, complete
cds
Length = 5257
Score = 1863 bits (4826), Expect = 0.0
Identities = 984/1066 (92%), Positives = 989/1066 (92%)
Frame = +2
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
Sbjct: 89 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 268
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
Sbjct: 269 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 448
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
Sbjct: 449 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 628
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
Sbjct: 629 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 808
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR 300
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDP+ASPGDAGEQAIR
Sbjct: 809 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR 988
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL 360
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQG+SPVAMQKAQQVSQGL
Sbjct: 989 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 1168
Query: 361 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 420
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
Sbjct: 1169 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 1348
Query: 421 LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
LCDDPKERDDILRSLGEI+ALTSKL DLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
Sbjct: 1349 LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 1528
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
Sbjct: 1529 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 1708
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS 600
LLAKCDRV RGEGESPQARALASQLQDSLKDLKA+MQEAMTQEVSDVFS
Sbjct: 1709 LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS 1888
Query: 601 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTVEG 660
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHS STVEG
Sbjct: 1889 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG 2068
Query: 661 IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 720
IQASVKTARELTPQV+SAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
Sbjct: 2069 IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 2248
Query: 721 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 780
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
Sbjct: 2249 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 2428
Query: 781 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXX 840
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA
Sbjct: 2429 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP 2608
Query: 841 XXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMM 900
RLTDELA QKAGEVINQPMMM
Sbjct: 2609 DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM 2788
Query: 901 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 960
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
Sbjct: 2789 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 2968
Query: 961 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 1020
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
Sbjct: 2969 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 3148
Query: 1021 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 3149 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 3286
>ref|NM_009502.1| Mus musculus vinculin (Vcl), mRNA
Length = 3228
Score = 1854 bits (4802), Expect = 0.0
Identities = 979/1066 (91%), Positives = 987/1066 (91%)
Frame = +3
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEP AQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
Sbjct: 18 MPVFHTRTIESILEPEAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 197
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
Sbjct: 198 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 377
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
Sbjct: 378 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 557
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVT+KNSKNQGIEEALKNRNFTVEKMSAE
Sbjct: 558 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTSKNSKNQGIEEALKNRNFTVEKMSAE 737
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR 300
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDP+ASPGDAGEQAIR
Sbjct: 738 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR 917
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL 360
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQG+SPVAMQKAQQVSQGL
Sbjct: 918 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 1097
Query: 361 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 420
DV+TAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
Sbjct: 1098 DVVTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 1277
Query: 421 LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
LCDDPKERDDILRSLGEI+ALTSKL DLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
Sbjct: 1278 LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 1457
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
VANSRPAKAAVHLEGKIEQA+RWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
Sbjct: 1458 VANSRPAKAAVHLEGKIEQARRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 1637
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS 600
LLAKCDRV RGEGESPQARALASQLQDSLKDLKA+MQEAMTQEVSDVFS
Sbjct: 1638 LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS 1817
Query: 601 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTVEG 660
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHS STVEG
Sbjct: 1818 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG 1997
Query: 661 IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 720
IQASVKTARELTPQV+SAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
Sbjct: 1998 IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 2177
Query: 721 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 780
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
Sbjct: 2178 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 2357
Query: 781 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXX 840
EAVKAASDELSKTISPMVMDAKAVAGNISDP LQKSFLDSGYRILGAVAKVREA
Sbjct: 2358 EAVKAASDELSKTISPMVMDAKAVAGNISDPDLQKSFLDSGYRILGAVAKVREAFQPQEP 2537
Query: 841 XXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMM 900
RLTDELA QKAGEVINQPMMM
Sbjct: 2538 DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM 2717
Query: 901 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 960
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
Sbjct: 2718 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 2897
Query: 961 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 1020
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
Sbjct: 2898 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 3077
Query: 1021 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 3078 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 3215
>gb|L18880.1|MUSVINCULX Mus musculus vinculin mRNA, complete cds
Length = 3228
Score = 1854 bits (4802), Expect = 0.0
Identities = 979/1066 (91%), Positives = 987/1066 (91%)
Frame = +3
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEP AQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
Sbjct: 18 MPVFHTRTIESILEPEAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 197
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
Sbjct: 198 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 377
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
Sbjct: 378 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 557
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVT+KNSKNQGIEEALKNRNFTVEKMSAE
Sbjct: 558 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTSKNSKNQGIEEALKNRNFTVEKMSAE 737
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR 300
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDP+ASPGDAGEQAIR
Sbjct: 738 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR 917
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL 360
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQG+SPVAMQKAQQVSQGL
Sbjct: 918 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 1097
Query: 361 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 420
DV+TAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
Sbjct: 1098 DVVTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 1277
Query: 421 LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
LCDDPKERDDILRSLGEI+ALTSKL DLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
Sbjct: 1278 LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 1457
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
VANSRPAKAAVHLEGKIEQA+RWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
Sbjct: 1458 VANSRPAKAAVHLEGKIEQARRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 1637
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS 600
LLAKCDRV RGEGESPQARALASQLQDSLKDLKA+MQEAMTQEVSDVFS
Sbjct: 1638 LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS 1817
Query: 601 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTVEG 660
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHS STVEG
Sbjct: 1818 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG 1997
Query: 661 IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 720
IQASVKTARELTPQV+SAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
Sbjct: 1998 IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 2177
Query: 721 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 780
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
Sbjct: 2178 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 2357
Query: 781 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXX 840
EAVKAASDELSKTISPMVMDAKAVAGNISDP LQKSFLDSGYRILGAVAKVREA
Sbjct: 2358 EAVKAASDELSKTISPMVMDAKAVAGNISDPDLQKSFLDSGYRILGAVAKVREAFQPQEP 2537
Query: 841 XXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMM 900
RLTDELA QKAGEVINQPMMM
Sbjct: 2538 DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM 2717
Query: 901 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 960
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
Sbjct: 2718 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 2897
Query: 961 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 1020
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
Sbjct: 2898 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 3077
Query: 1021 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 3078 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 3215
>gb|J04126.1|CHKVINX Chicken vinculin mRNA, complete cds
Length = 3247
Score = 1801 bits (4666), Expect = 0.0
Identities = 943/1066 (88%), Positives = 975/1066 (91%)
Frame = +3
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV+AVQAAVSNLVRVGKE
Sbjct: 21 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKE 200
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
TVQTTEDQILKRDMPPAFIKVENACTKLV+AAQMLQ+DPYSVPARDYLIDGSRGILSGTS
Sbjct: 201 TVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTS 380
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
Sbjct: 381 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 560
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKN+K+QGIEEALKNRNFTVEKMSAE
Sbjct: 561 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNTKSQGIEEALKNRNFTVEKMSAE 740
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR 300
INEIIRVLQLTSWDEDAWASKDTEAMKRALA IDSK+NQAKGWLRDP+A PGDAGEQAIR
Sbjct: 741 INEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAIR 920
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL 360
QILDEAGK GELCAGKERREILGTCK LGQMTDQ+ADLRARGQG++P+AMQKAQQVSQGL
Sbjct: 921 QILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGL 1100
Query: 361 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 420
D+LTAKVENAARKLEAMTNSKQ+IAKKIDAAQNWLADPNGG EGEE IRG ++EARK+AE
Sbjct: 1101 DLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAE 1280
Query: 421 LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
LC++PKERDDILRSLGEISALT+KL+DLRR GKGDSPEARALAKQ+AT+LQNLQ+KTNRA
Sbjct: 1281 LCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNRA 1460
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
VAN+RP KAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEG RLANVMMGPYRQD
Sbjct: 1461 VANTRPVKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRRLANVMMGPYRQD 1640
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS 600
LLAKCDRV RGEGESPQARA+A+QLQDSLKDLKARMQEAMTQEVSDVFS
Sbjct: 1641 LLAKCDRVDQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLKARMQEAMTQEVSDVFS 1820
Query: 601 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTVEG 660
DTTTPIKLLAVAATAP D PNREEVF+ERAANFENH+ +TVEG
Sbjct: 1821 DTTTPIKLLAVAATAPSDTPNREEVFEERAANFENHAARLGATAEKAAAVGTANKTTVEG 2000
Query: 661 IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 720
IQA+VK+ARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
Sbjct: 2001 IQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 2180
Query: 721 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 780
SLLDASEEAIKKDLDKCKVAMAN+QPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
Sbjct: 2181 SLLDASEEAIKKDLDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 2360
Query: 781 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXX 840
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA
Sbjct: 2361 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP 2540
Query: 841 XXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMM 900
LTDELA QKAGE INQPMMM
Sbjct: 2541 DFPPPPPDLEHLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEAINQPMMM 2720
Query: 901 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 960
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSG KRALIQCAKDIAKASDE
Sbjct: 2721 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDE 2900
Query: 961 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 1020
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
Sbjct: 2901 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 3080
Query: 1021 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 3081 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 3218
>ref|NM_014000.1| Homo sapiens vinculin (VCL), transcript variant meta-VCL, mRNA
Length = 5341
Score = 1755 bits (4546), Expect = 0.0
Identities = 956/1134 (84%), Positives = 963/1134 (84%), Gaps = 68/1134 (5%)
Frame = +2
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
Sbjct: 86 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 265
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
Sbjct: 266 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 445
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
Sbjct: 446 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 625
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
Sbjct: 626 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 805
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR 300
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR
Sbjct: 806 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR 985
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL 360
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL
Sbjct: 986 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL 1165
Query: 361 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 420
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
Sbjct: 1166 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 1345
Query: 421 LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
Sbjct: 1346 LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 1525
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
Sbjct: 1526 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 1705
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS 600
LLAKCDRV RGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS
Sbjct: 1706 LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS 1885
Query: 601 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTVEG 660
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHS STVEG
Sbjct: 1886 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGKLGATAEKAAAVGTANKSTVEG 2065
Query: 661 IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 720
IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
Sbjct: 2066 IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 2245
Query: 721 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 780
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
Sbjct: 2246 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 2425
Query: 781 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXX 840
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA
Sbjct: 2426 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP 2605
Query: 841 XXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMM 900
RLTDELA QKAGEVINQPMMM
Sbjct: 2606 DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM 2785
Query: 901 AARQLHDEARKWSSK--------GNDIIAAAK---------------------------- 924
AARQLHDEARKWSSK G ++A A
Sbjct: 2786 AARQLHDEARKWSSKPGIPAAEVGIGVVAEADAADAAGFPVPPDMEDDYEPELLLMPSNQ 2965
Query: 925 --RMALLMAEMS--RLVRGGSGTKRALIQCAKDIAKASDEVTRL---------------- 964
+L A S R S +I AK +A E++RL
Sbjct: 2966 PVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAK 3145
Query: 965 ------------AKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNIS 1012
AKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNIS
Sbjct: 3146 DIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNIS 3325
Query: 1013 DEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
DEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 3326 DEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 3487
>emb|Y00312.1|GGVINCR Chick mRNA for vinculin
Length = 2891
Score = 1464 bits (3790), Expect = 0.0
Identities = 761/859 (88%), Positives = 791/859 (91%)
Frame = +1
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV+AVQAAVSNLVRVGKE
Sbjct: 247 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKE 426
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
TVQTTEDQILKRDMPPAFIKVENACTKLV+AAQMLQ+DPYSVPARDYLIDGSRGILSGTS
Sbjct: 427 TVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTS 606
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
Sbjct: 607 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 786
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKN+K+QGIEEALKNRNFTVEKMSAE
Sbjct: 787 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNTKSQGIEEALKNRNFTVEKMSAE 966
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR 300
INEIIRVLQLTSWDEDAWASKDTEAMKRALA IDSK+NQAKGWLRDP+A PGDAGEQAIR
Sbjct: 967 INEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAIR 1146
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL 360
QILDEAGK GELCAGKERREILGTCK LGQMTDQ+ADLRARGQG++P+AMQKAQQVSQGL
Sbjct: 1147 QILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGL 1326
Query: 361 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 420
D+LTAKVENAARKLEAMTNSKQ+IAKKIDAAQNWLADPNGG EGEE IRG ++EARK+AE
Sbjct: 1327 DLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAE 1506
Query: 421 LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
LC++PKERDDILRSLGEISAL LRR GKGDSPEARALAKQ+AT+LQNLQ+KTNRA
Sbjct: 1507 LCEEPKERDDILRSLGEISALQLSCQILRRHGKGDSPEARALAKQIATSLQNLQSKTNRA 1686
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
VAN+RP KAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEG RLANVMMGPYRQD
Sbjct: 1687 VANTRPVKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRRLANVMMGPYRQD 1866
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS 600
LLAKCDRV RGEGESPQARA+A+QLQDSLKDLKARMQEAMTQEVSDVFS
Sbjct: 1867 LLAKCDRVDQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLKARMQEAMTQEVSDVFS 2046
Query: 601 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTVEG 660
DTTTPIKLLAVAATAP D PNREEVF+ERAANFENH+ +TVEG
Sbjct: 2047 DTTTPIKLLAVAATAPSDTPNREEVFEERAANFENHAARLGATAEKAAAVGTANKTTVEG 2226
Query: 661 IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 720
IQA+VK+ARELTPQVVSAARILLRNPGNQAAYEHFETMKN WIDNVEKMTGLVDEAIDTK
Sbjct: 2227 IQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNHWIDNVEKMTGLVDEAIDTK 2406
Query: 721 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 780
SLLDASEEAIKKDLDKCKVAMAN+QPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
Sbjct: 2407 SLLDASEEAIKKDLDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 2586
Query: 781 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXX 840
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA
Sbjct: 2587 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP 2766
Query: 841 XXXXXXXXXXXXRLTDELA 859
LTDELA
Sbjct: 2767 DFPPPPPDLEHLHLTDELA 2823
>gb|BC008554.1|BC008554 Mus musculus, Similar to vinculin, clone IMAGE:3591911, mRNA, partial
cds
Length = 3138
Score = 633 bits (1632), Expect = e-179
Identities = 343/389 (88%), Positives = 343/389 (88%)
Frame = +1
Query: 678 AARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKC 737
AARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKC
Sbjct: 1 AARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKC 180
Query: 738 KVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPM 797
KVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPM
Sbjct: 181 KVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPM 360
Query: 798 VMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDE 857
VMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA RLTDE
Sbjct: 361 VMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEPDFPPPPPDLEQLRLTDE 540
Query: 858 LAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMMAARQLHDEARKWSSKGN 917
LA QKAGEVINQPMMMAARQLHDEARKWSSKGN
Sbjct: 541 LAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMMAARQLHDEARKWSSKGN 720
Query: 918 DIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRI 977
DIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRI
Sbjct: 721 DIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRI 900
Query: 978 RTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKET 1037
RTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKET
Sbjct: 901 RTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKET 1080
Query: 1038 VREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
VREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 1081 VREAEAASIKIRTDAGFTLRWVRKTPWYQ 1167
>ref|NM_057472.1| Drosophila melanogaster Vinculin (Vinc), transcript variant
Vinc-P1|CDS, mRNA
Length = 2886
Score = 379 bits (974), Expect = e-103
Identities = 208/487 (42%), Positives = 302/487 (61%), Gaps = 4/487 (0%)
Frame = +1
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHT+TIESIL+PVAQQ+S LVI+HEE E DG A+PDL+ PV V AAV+NLV+VG++
Sbjct: 1 MPVFHTKTIESILDPVAQQVSRLVILHEEAE-DGNAMPDLSRPVQVVSAAVANLVKVGRD 177
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
T+ +++D+IL++DMP A +VE A L +A+ ML+SDPYS PAR LI+GSRGIL GTS
Sbjct: 178 TINSSDDKILRQDMPSALHRVEGASQLLEEASDMLRSDPYSGPARKKLIEGSRGILQGTS 357
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
LLL FDE+EVRKII+ CK +L+YL VAEV+ TME LV + K+L P ++K+ + + R++
Sbjct: 358 SLLLCFDESEVRKIIQECKRVLDYLAVAEVINTMEQLVQFLKDLSPCLSKVHREVGAREK 537
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQ H +LV + VK L P+LI +MK+++ + +G EEA +NRN+ +MS E
Sbjct: 538 ELTHQVHSEILVRCLEQVKTLAPILICSMKVYIHIVEQQGRGAEEAAENRNYLAARMSDE 717
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR 300
+ EIIRVLQLT++DED + +K+ +I +K+ QA WL +P A G GE+A+R
Sbjct: 718 LQEIIRVLQLTTYDEDTSELDNLTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALR 897
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL 360
Q++D A ++ E C ++ I + M + + +LR G+G SP A + + +
Sbjct: 898 QVIDNATEISERCLPQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRM 1077
Query: 361 DVLTAKVENAARKLE--AMTNSKQSIAKKIDAAQNWLADP--NGGPEGEEQIRGALAEAR 416
L + V A ++ + + +I +++ A WL P N G GE I + E R
Sbjct: 1078GELKSLVHQAVLGVDKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGR 1257
Query: 417 KIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTK 476
K+AE C ++ EI L ++ L+RQ G P A+ AKQ+ L L+
Sbjct: 1258KVAEGCPGHQK--------AEIQQLCDEVERLKRQAAGSGPAAKQAAKQLTQKLYELKAA 1413
Query: 477 TNRAVAN 483
A+ N
Sbjct: 1414IQNALVN 1434
Score = 258 bits (658), Expect = 3e-66
Identities = 154/477 (32%), Positives = 258/477 (53%), Gaps = 6/477 (1%)
Frame = +1
Query: 364 TAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNG--GPEGEEQIRGALAEARKIAEL 421
T++++N L + +I+ K++ A WL++P G GE+ +R + A +I+E
Sbjct: 766 TSELDN----LTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISER 933
Query: 422 CDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRAV 481
C P++ I + E++A+ + L +LR++GKG SP+A +L + + + L++ ++AV
Sbjct: 934 CL-PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAV 1110
Query: 482 ANSRPA---KAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYR 538
A + A ++G++EQA +W+ +P ++D G+G+ AI +V EG ++A G +
Sbjct: 1111 LGVDKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK 1290
Query: 539 QDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDV 598
++ CD V + G P A+ A QL L +LKA +Q A+ +
Sbjct: 1291 AEIQQLCDEVERLKR-------QAAGSGPAAKQAAKQLTQKLYELKAAIQNALVNRIVQD 1449
Query: 599 FSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTV 658
F D +TP+K A P P RE+ F++++ N + S +
Sbjct: 1450 FMDVSTPLKQFTEAVLQPEGTPGREQNFNQKSNNLQAFSDRASKTSRMVAAGGACGNKKI 1629
Query: 659 -EGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAI 717
E + +S LTPQ++SA RI + PG++AA EH + +K Q+ D V +M L D+A
Sbjct: 1630 AEILLSSAAQVDSLTPQLISAGRIRMNYPGSKAADEHLQNLKQQYADTVLRMRTLCDQAT 1809
Query: 718 DTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDP 777
D + SEE ++ C+ A+ QPQ +V ++IAR NR+LLVAK+E +NSEDP
Sbjct: 1810 DPADFIKTSEEHMQVYAKLCEDAIHARQPQKMVDNTSNIARLINRVLLVAKQEADNSEDP 1989
Query: 778 KFREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA 834
F E + AA++ L +++ MV DAK VA NI+DP ++ +S R+LG V +VR+A
Sbjct: 1990 VFTERLNAAANRLERSLPAMVGDAKLVATNIADPAAAAAWKNSFQRLLGDVREVRDA 2160
Score = 227 bits (579), Expect = 4e-57
Identities = 126/174 (72%), Positives = 144/174 (82%), Gaps = 2/174 (1%)
Frame = +1
Query: 895 NQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGS-GTKRALIQCAKD 953
NQP+++AAR LH E R+WSSK N+IIAAAKRMA+LMA +S LV S G+KR LI AK
Sbjct: 2365 NQPILIAARGLHQEVRQWSSKDNEIIAAAKRMAILMARLSELVLSDSRGSKRELIATAKK 2544
Query: 954 IAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISD 1013
IA+AS++VTRLAKE+A+QCTD+RIRTNLLQVCERIPTI TQLKILSTVKATMLG SD
Sbjct: 2545 IAEASEDVTRLAKELARQCTDRRIRTNLLQVCERIPTIGTQLKILSTVKATMLGAQG-SD 2721
Query: 1014 EESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTD-AGFTLRWVRKTPWYQ 1066
E+ E ATEMLV NAQNLMQSVKETVR AE ASIKIR+D L+WVR+ PWYQ
Sbjct: 2722 EDRE-ATEMLVGNAQNLMQSVKETVRAAEGASIKIRSDQTSNRLQWVRRQPWYQ 2880
>ref|NM_068703.1| Caenorhabditis elegans
Length = 3045
Score = 364 bits (935), Expect = 2e-98
Identities = 205/484 (42%), Positives = 308/484 (63%), Gaps = 11/484 (2%)
Frame = +1
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHT+TIE+ILEPVAQQ+S LVI+HEE DG A+PDLT PV V AV NL++VG +
Sbjct: 1 MPVFHTKTIENILEPVAQQVSRLVILHEEAN-DGNAMPDLTGPVGMVSRAVGNLIQVGYD 177
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
T ++D+IL++DMPPA +VE + L +++ L+ DPYSVPAR LIDG+RGIL GTS
Sbjct: 178 TCDHSDDRILQQDMPPALQRVEGSSKLLEESSYSLKHDPYSVPARKKLIDGARGILQGTS 357
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
LLL FDE+EVRKIIRVC+ +Y+ V+EV+E+M DL + K++ P + + ++ RQQ
Sbjct: 358 ALLLCFDESEVRKIIRVCRKANDYVAVSEVIESMADLQQFVKDISPVLHDVTNDVNLRQQ 537
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKN-SKNQGIEEALKNRNFTVEKMSA 239
ELTHQ HR +L+ M+++K + P+LI +MK + QG EA+ NRNF ++M+
Sbjct: 538 ELTHQVHREILIRCMDSIKVIAPILICSMKTSIELGTPHPRQGHAEAIANRNFMSQRMTE 717
Query: 240 EINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAI 299
E+NEIIRVLQLT++DED W + + M++AL++ S L A WL DP A G GE+AI
Sbjct: 718 EMNEIIRVLQLTTYDEDEWDADNVTVMRKALSAAKSLLTAALDWLADPHARSGAVGEKAI 897
Query: 300 RQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQG 359
R+I + A ++ ++ + I + + TD++ +LR GQ P A Q ++
Sbjct: 898 RRICEYADRISARALPEDAQSIKRSIFEITSFTDELCNLRNNGQ---PDRENLAAQTARR 1068
Query: 360 LDVLTAKVENAARKLEAMTNSKQ--------SIAKKIDAAQNWLADP--NGGPEGEEQIR 409
L L ++ +A+ N+++ + A +++ A WL +P + G G + +R
Sbjct: 1069LKDLVGSQNSSGLMGDALQNAQRHGGANPAHTAAGRLEQALRWLDNPGLDDGGLGLQALR 1248
Query: 410 GALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATA 469
A+ARK+A+ +P++R+ +L +I L ++LADL R+G G+SPEA + Q+ A
Sbjct: 1249LLTADARKLADRL-NPQDRNRLLGLCSDIDRLAAQLADLERRGLGNSPEAHQIRNQLKNA 1425
Query: 470 LQNL 473
L++L
Sbjct: 1426LRDL 1437
Score = 242 bits (617), Expect = 2e-61
Identities = 157/476 (32%), Positives = 248/476 (51%), Gaps = 12/476 (2%)
Frame = +1
Query: 371 ARKLEAMTNSKQSIAKKIDAAQNWLADPNG--GPEGEEQIRGALAEARKIAELCDDPKER 428
A + M + + + AA +WLADP+ G GE+ IR A +I+ P++
Sbjct: 778 ADNVTVMRKALSAAKSLLTAALDWLADPHARSGAVGEKAIRRICEYADRISARAL-PEDA 954
Query: 429 DDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNR------AVA 482
I RS+ EI++ T +L +LR G+ P+ LA Q A L++L N A+
Sbjct: 955 QSIKRSIFEITSFTDELCNLRNNGQ---PDRENLAAQTARRLKDLVGSQNSSGLMGDALQ 1125
Query: 483 NSRP---AKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQ 539
N++ A A G++EQA RW+DNP +DD G+G A+R L A+ +LA+ + R
Sbjct: 1126 NAQRHGGANPAHTAAGRLEQALRWLDNPGLDDGGLGLQALRLLTADARKLADRLNPQDRN 1305
Query: 540 DLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVF 599
LL C + RG G SP+A + +QL+++L+DL M+ +T V D F
Sbjct: 1306 RLLGLCSDIDRLAAQLADLERRGLGNSPEAHQIRNQLKNALRDLGDFMRRVLTDRVVDDF 1485
Query: 600 SDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXX-XXXXXXSTV 658
+D TTP+K A A P PNRE+ F +++ +HS TV
Sbjct: 1486 ADITTPLKQFVEAVHADPYDPNREQNFVDKSQRLTDHSQSMTTTARLVASCGPSKSKKTV 1665
Query: 659 EGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAID 718
E I + + +LTPQ+V+A R+ L NPG++ +HFE + Q+ D + ++ VD+AID
Sbjct: 1666 EAILDTAEKVEQLTPQLVNAGRVRLHNPGSE---QHFENIHKQYADALHRLRSHVDDAID 1836
Query: 719 TKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPK 778
T + ASE A+++ + C+ A+ LV ++ IAR NR+L+ A+ E +NSE+P
Sbjct: 1837 TGEFVRASETAMRRYTNHCEGAINGADAHGLVNNSSQIARLGNRVLMTAQNEADNSEEPS 2016
Query: 779 FREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA 834
F V+ A+D+L I PMV +AK +A N D +++ + +L +V V +A
Sbjct: 2017 FVSRVRNAADQLHNAIPPMVNNAKQIAQNPHDQYAAQNWRGTNDHLLNSVRAVGDA 2184
Score = 213 bits (541), Expect = 1e-52
Identities = 113/183 (61%), Positives = 141/183 (76%), Gaps = 13/183 (7%)
Frame = +1
Query: 895 NQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDI 954
+QPM+ AA LH+E ++WSS+ NDI+AAAKRMA+LMA +S+LVRG GTK+ LI C+K I
Sbjct: 2485 HQPMLAAAHNLHNELKQWSSQENDIVAAAKRMAILMARLSQLVRGEGGTKKDLINCSKAI 2664
Query: 955 AKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTN-ISD 1013
A +S+EVTRLA ++A+ CTD ++RT LLQV ERIPTI+TQLK+LSTVKATMLG ISD
Sbjct: 2665 ADSSEEVTRLAVQLARLCTDIKMRTALLQVSERIPTIATQLKVLSTVKATMLGSAKPISD 2844
Query: 1014 ------------EESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRK 1061
EE ++A + LVHNAQNLMQSVK+ VR AEAASIKIRT++G LRW+RK
Sbjct: 2845 VIGPYGQPVEGSEEDDEAMQQLVHNAQNLMQSVKDVVRAAEAASIKIRTNSGLRLRWLRK 3024
Query: 1062 TPW 1064
W
Sbjct: 3025 PMW 3033
>gb|U07023.1|BMU07023 Brugia malayi vinculin mRNA, complete cds
Length = 3498
Score = 362 bits (929), Expect = 1e-97
Identities = 199/481 (41%), Positives = 299/481 (61%), Gaps = 8/481 (1%)
Frame = +3
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHT+TIE ILEPVAQQ+S LVI+HEE E DG A+ DLT PV AV AV NL++VG +
Sbjct: 237 MPVFHTKTIEGILEPVAQQVSRLVILHEEAE-DGNAVLDLTLPVGAVSRAVDNLIKVGYD 413
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
T +++D+IL+ DMPPA +VE + L A ML++DPYS AR LI+G+RGIL GTS
Sbjct: 414 TCHSSDDRILQADMPPALQRVEASSRLLEDACHMLRADPYSSVARKKLIEGARGILQGTS 593
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
LLL+FDE+EVRKIIR C+ +L+YL VAEV+E+M+DL + K++ P +T++++ ID R++
Sbjct: 594 ALLLSFDESEVRKIIRGCRKVLDYLAVAEVIESMDDLAQFVKDISPWLTRVSRNIDAREK 773
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQ HR +L+ M+TVK L P++I AMKIF+ +G +EA +NRN+ ++M+ E
Sbjct: 774 ELTHQVHREILLRCMDTVKTLSPIMICAMKIFIQITEESQRGQQEAAENRNYLAQRMTDE 953
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR 300
+NEIIRVLQLT++DED W S + M++AL++ S L A WL D G GE+AIR
Sbjct: 954 MNEIIRVLQLTTYDEDEWDSDNVTVMRKALSAAQSLLTSALDWLADSRGRAGATGEKAIR 1133
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL 360
+I+D + ++ ++ R I T + MTD + +LR +G S +A A ++ + +
Sbjct: 1134RIVDYSERIAARALPEDARLIRATVSDITSMTDSLCELRNQGGDSQGLASGCANRLKELV 1313
Query: 361 ------DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADP--NGGPEGEEQIRGAL 412
+L + + N R T+ ++ +++ A W+ +P + G + ++
Sbjct: 1314GTKEISGILPSALTNTQR--TGGTHPAHTVTGRLEQALRWMDNPGVDDNGLGLQAVKAMT 1487
Query: 413 AEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQN 472
+EA + + + + EI +LADL +G G+ P A A+ Q+ L+
Sbjct: 1488SEAGNLQPIYSHLQNVRKFVDLCVEIDRQADQLADLEHRGLGNPPAAHAIRNQLRNKLRE 1667
Query: 473 L 473
L
Sbjct: 1668L 1670
Score = 216 bits (549), Expect = 1e-53
Identities = 145/460 (31%), Positives = 230/460 (49%), Gaps = 13/460 (2%)
Frame = +3
Query: 388 IDAAQNWLADPNG--GPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKL 445
+ +A +WLAD G G GE+ IR + + +IA P++ I ++ +I+++T L
Sbjct: 1062 LTSALDWLADSRGRAGATGEKAIRRIVDYSERIAARAL-PEDARLIRATVSDITSMTDSL 1238
Query: 446 ADLRRQGKGDSPEARALA---------KQVATALQNLQTKTNRAVANSRPAKAAVHLEGK 496
+LR QG A A K+++ L + T T R + PA G+
Sbjct: 1239 CELRNQGGDSQGLASGCANRLKELVGTKEISGILPSALTNTQRT-GGTHPAHTVT---GR 1406
Query: 497 IEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYR-QDLLAKCDRVXXXXXXX 555
+EQA RW+DNP VDD G+G A++ + +E L + + + C +
Sbjct: 1407 LEQALRWMDNPGVDDNGLGLQAVKAMTSEAGNLQPIYSHLQNVRKFVDLCVEIDRQADQL 1586
Query: 556 XXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
RG G P A A+ +QL++ L++L M++ +T V + F+D +TP+K A A
Sbjct: 1587 ADLEHRGLGNPPAAHAIRNQLRNKLRELVDIMKKVITDRVVEDFADISTPLKQFVDAVYA 1766
Query: 616 PPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXX-XXXSTVEGIQASVKTARELTPQ 674
P NRE F+E+A N ++HS TVE I + +TPQ
Sbjct: 1767 SPTIVNRELSFEEKAHNLDDHSSRCANTALLVAKCGPCKNKKTVEAIIEAANQVNAMTPQ 1946
Query: 675 VVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDL 734
V+ A +I L N + A HF+ ++ ++ D + ++ VD+AIDT + ASE+A+++
Sbjct: 1947 VIKAGKIRLHNDSDSANL-HFDNLRREYSDVLNRLRSHVDDAIDTSDFIRASEQAMRQYT 2123
Query: 735 DKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTI 794
C+ A+ N +PQ +V + IAR NR+L+ AK E +NSE+P F V A+ L I
Sbjct: 2124 VYCENAIRNNEPQQMVDNTSQIARFGNRVLMTAKNEADNSEEPSFVHRVNNAARRLHSAI 2303
Query: 795 SPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA 834
PMV AK VA N G +S+ D+ +L AV +V +A
Sbjct: 2304 PPMVNQAKQVALNPRHGGNAQSWRDANEHLLSAVRQVGDA 2423
Score = 211 bits (536), Expect = 4e-52
Identities = 111/179 (62%), Positives = 136/179 (75%), Gaps = 9/179 (5%)
Frame = +3
Query: 895 NQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDI 954
+QP++ AA LH E R+WSS N+I+AAAKRMA+LMA +S+LVRG GTK+ L+ CAK I
Sbjct: 2670 SQPILSAAHNLHQELRQWSSHENEIVAAAKRMAILMARLSQLVRGEGGTKKDLVDCAKAI 2849
Query: 955 AKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNI--- 1011
A +S+EVTRLA ++A+QCT ++R LLQVCERIPTI+TQLKILSTVKATMLG
Sbjct: 2850 ADSSEEVTRLAVQLARQCTVIKMRMTLLQVCERIPTIATQLKILSTVKATMLGSQATIGP 3029
Query: 1012 ------SDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPW 1064
EE E+A + LV NAQNLMQSVK+TVR AEAASIKIRT++G LRW+RK W
Sbjct: 3030 YGQPIDGSEEDEEAMQQLVLNAQNLMQSVKDTVRAAEAASIKIRTNSGLRLRWIRKPMW 3206
>gb|AE003423.1|AE003423 Drosophila melanogaster genomic scaffold 142000013386054 section 7 of 35,
complete sequence
Length = 291976
Score = 348 bits (892), Expect = 2e-93
Identities = 193/473 (40%), Positives = 286/473 (59%), Gaps = 4/473 (0%)
Frame = -2
Query: 15 PVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDM 74
P +Q+S LVI+HEE E DG A+PDL+ PV V AAV+NLV+VG++T+ +++D+IL++DM
Sbjct: 151278 PRDRQVSRLVILHEEAE-DGNAMPDLSRPVQVVSAAVANLVKVGRDTINSSDDKILRQDM 151102
Query: 75 PPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKI 134
P A +VE A L +A+ ML+SDPYS PAR LI+GSRGIL GTS LLL FDE+EVRKI
Sbjct: 151101 PSALHRVEGASQLLEEASDMLRSDPYSGPARKKLIEGSRGILQGTSSLLLCFDESEVRKI 150922
Query: 135 IRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNS 194
I+ CK +L+YL VAEV+ TME LV + K+L P ++K+ + + R++ELTHQ H +LV
Sbjct: 150921 IQECKRVLDYLAVAEVINTMEQLVQFLKDLSPCLSKVHREVGAREKELTHQVHSEILVRC 150742
Query: 195 MNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWD 254
+ VK L P+LI +MK+++ + +G EEA +NRN+ +MS E+ EIIRVLQLT++D
Sbjct: 150741 LEQVKTLAPILICSMKVYIHIVEQQGRGAEEAAENRNYLAARMSDELQEIIRVLQLTTYD 150562
Query: 255 EDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCA 314
ED + +K+ +I +K+ QA WL +P A G GE+A+RQ++D A ++ E C
Sbjct: 150561 EDTSELDNLTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISERCL 150382
Query: 315 GKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKL 374
++ I + M + + +LR G+G SP A + + + L + V A +
Sbjct: 150381 PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAVLGV 150202
Query: 375 E--AMTNSKQSIAKKIDAAQNWLADP--NGGPEGEEQIRGALAEARKIAELCDDPKERDD 430
+ + + +I +++ A WL P N G GE I + E RK+AE C ++
Sbjct: 150201 DKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK--- 150031
Query: 431 ILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVAN 483
EI L ++ L+RQ G P A+ AKQ+ L L+ A+ N
Sbjct: 150030 -----AEIQQLCDEVERLKRQAAGSGPAAKQAAKQLTQKLYELKAAIQNALVN 149887
Score = 258 bits (658), Expect = 3e-66
Identities = 154/477 (32%), Positives = 258/477 (53%), Gaps = 6/477 (1%)
Frame = -2
Query: 364 TAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNG--GPEGEEQIRGALAEARKIAEL 421
T++++N L + +I+ K++ A WL++P G GE+ +R + A +I+E
Sbjct: 150555 TSELDN----LTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISER 150388
Query: 422 CDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRAV 481
C P++ I + E++A+ + L +LR++GKG SP+A +L + + + L++ ++AV
Sbjct: 150387 CL-PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAV 150211
Query: 482 ANSRPA---KAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYR 538
A + A ++G++EQA +W+ +P ++D G+G+ AI +V EG ++A G +
Sbjct: 150210 LGVDKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK 150031
Query: 539 QDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDV 598
++ CD V + G P A+ A QL L +LKA +Q A+ +
Sbjct: 150030 AEIQQLCDEVERLKR-------QAAGSGPAAKQAAKQLTQKLYELKAAIQNALVNRIVQD 149872
Query: 599 FSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTV 658
F D +TP+K A P P RE+ F++++ N + S +
Sbjct: 149871 FMDVSTPLKQFTEAVLQPEGTPGREQNFNQKSNNLQAFSDRASKTSRMVAAGGACGNKKI 149692
Query: 659 -EGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAI 717
E + +S LTPQ++SA RI + PG++AA EH + +K Q+ D V +M L D+A
Sbjct: 149691 AEILLSSAAQVDSLTPQLISAGRIRMNYPGSKAADEHLQNLKQQYADTVLRMRTLCDQAT 149512
Query: 718 DTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDP 777
D + SEE ++ C+ A+ QPQ +V ++IAR NR+LLVAK+E +NSEDP
Sbjct: 149511 DPADFIKTSEEHMQVYAKLCEDAIHARQPQKMVDNTSNIARLINRVLLVAKQEADNSEDP 149332
Query: 778 KFREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA 834
F E + AA++ L +++ MV DAK VA NI+DP ++ +S R+LG V +VR+A
Sbjct: 149331 VFTERLNAAANRLERSLPAMVGDAKLVATNIADPAAAAAWKNSFQRLLGDVREVRDA 149161
Score = 198 bits (503), Expect = 3e-48
Identities = 123/213 (57%), Positives = 139/213 (64%), Gaps = 46/213 (21%)
Frame = -2
Query: 900 MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGS-GTKRALIQCAKDIAKAS 958
+AAR LH E R+WSSK N+IIAAAKRMA+LMA +S LV S G+KR LI AK IA+AS
Sbjct: 148821 IAARGLHQEVRQWSSKDNEIIAAAKRMAILMARLSELVLSDSRGSKRELIATAKKIAEAS 148642
Query: 959 DEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQ 1018
++VTRLAKE+A+QCTD+RIRTNLLQVCERIPTI TQLKILSTVKATMLG SDE+ E
Sbjct: 148641 EDVTRLAKELARQCTDRRIRTNLLQVCERIPTIGTQLKILSTVKATMLGAQG-SDEDRE- 148468
Query: 1019 ATEMLVHNAQNLMQS--------------------------------------------V 1034
ATEMLV NAQNLMQS V
Sbjct: 148467 ATEMLVGNAQNLMQSVSLEMLSNCLAKFTGRSRHS*SFWALPLPVPFHC*ILSFYVRFQV 148288
Query: 1035 KETVREAEAASIKIRTD-AGFTLRWVRKTPWYQ 1066
KETVR AE ASIKIR+D L+WVR+ PWYQ
Sbjct: 148287 KETVRAAEGASIKIRSDQTSNRLQWVRRQPWYQ 148189
Score = 42.0 bits (97), Expect = 0.34
Identities = 18/21 (85%), Positives = 21/21 (99%)
Frame = -2
Query: 1 MPVFHTRTIESILEPVAQQIS 21
MPVFHT+TIESIL+PVAQQ+S
Sbjct: 153597 MPVFHTKTIESILDPVAQQVS 153535
>ref|NG_000237.1| Drosophila melanogaster Vinculin (Vinc) on chromosome 1
Length = 12698
Score = 348 bits (892), Expect = 2e-93
Identities = 193/473 (40%), Positives = 286/473 (59%), Gaps = 4/473 (0%)
Frame = +3
Query: 15 PVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDM 74
P +Q+S LVI+HEE E DG A+PDL+ PV V AAV+NLV+VG++T+ +++D+IL++DM
Sbjct: 5271 PRDRQVSRLVILHEEAE-DGNAMPDLSRPVQVVSAAVANLVKVGRDTINSSDDKILRQDM 5447
Query: 75 PPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKI 134
P A +VE A L +A+ ML+SDPYS PAR LI+GSRGIL GTS LLL FDE+EVRKI
Sbjct: 5448 PSALHRVEGASQLLEEASDMLRSDPYSGPARKKLIEGSRGILQGTSSLLLCFDESEVRKI 5627
Query: 135 IRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNS 194
I+ CK +L+YL VAEV+ TME LV + K+L P ++K+ + + R++ELTHQ H +LV
Sbjct: 5628 IQECKRVLDYLAVAEVINTMEQLVQFLKDLSPCLSKVHREVGAREKELTHQVHSEILVRC 5807
Query: 195 MNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWD 254
+ VK L P+LI +MK+++ + +G EEA +NRN+ +MS E+ EIIRVLQLT++D
Sbjct: 5808 LEQVKTLAPILICSMKVYIHIVEQQGRGAEEAAENRNYLAARMSDELQEIIRVLQLTTYD 5987
Query: 255 EDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCA 314
ED + +K+ +I +K+ QA WL +P A G GE+A+RQ++D A ++ E C
Sbjct: 5988 EDTSELDNLTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISERCL 6167
Query: 315 GKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKL 374
++ I + M + + +LR G+G SP A + + + L + V A +
Sbjct: 6168 PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAVLGV 6347
Query: 375 E--AMTNSKQSIAKKIDAAQNWLADP--NGGPEGEEQIRGALAEARKIAELCDDPKERDD 430
+ + + +I +++ A WL P N G GE I + E RK+AE C ++
Sbjct: 6348 DKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK--- 6518
Query: 431 ILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVAN 483
EI L ++ L+RQ G P A+ AKQ+ L L+ A+ N
Sbjct: 6519 -----AEIQQLCDEVERLKRQAAGSGPAAKQAAKQLTQKLYELKAAIQNALVN 6662
Score = 258 bits (658), Expect = 3e-66
Identities = 154/477 (32%), Positives = 258/477 (53%), Gaps = 6/477 (1%)
Frame = +3
Query: 364 TAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNG--GPEGEEQIRGALAEARKIAEL 421
T++++N L + +I+ K++ A WL++P G GE+ +R + A +I+E
Sbjct: 5994 TSELDN----LTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISER 6161
Query: 422 CDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRAV 481
C P++ I + E++A+ + L +LR++GKG SP+A +L + + + L++ ++AV
Sbjct: 6162 CL-PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAV 6338
Query: 482 ANSRPA---KAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYR 538
A + A ++G++EQA +W+ +P ++D G+G+ AI +V EG ++A G +
Sbjct: 6339 LGVDKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK 6518
Query: 539 QDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDV 598
++ CD V + G P A+ A QL L +LKA +Q A+ +
Sbjct: 6519 AEIQQLCDEVERLKR-------QAAGSGPAAKQAAKQLTQKLYELKAAIQNALVNRIVQD 6677
Query: 599 FSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTV 658
F D +TP+K A P P RE+ F++++ N + S +
Sbjct: 6678 FMDVSTPLKQFTEAVLQPEGTPGREQNFNQKSNNLQAFSDRASKTSRMVAAGGACGNKKI 6857
Query: 659 -EGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAI 717
E + +S LTPQ++SA RI + PG++AA EH + +K Q+ D V +M L D+A
Sbjct: 6858 AEILLSSAAQVDSLTPQLISAGRIRMNYPGSKAADEHLQNLKQQYADTVLRMRTLCDQAT 7037
Query: 718 DTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDP 777
D + SEE ++ C+ A+ QPQ +V ++IAR NR+LLVAK+E +NSEDP
Sbjct: 7038 DPADFIKTSEEHMQVYAKLCEDAIHARQPQKMVDNTSNIARLINRVLLVAKQEADNSEDP 7217
Query: 778 KFREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA 834
F E + AA++ L +++ MV DAK VA NI+DP ++ +S R+LG V +VR+A
Sbjct: 7218 VFTERLNAAANRLERSLPAMVGDAKLVATNIADPAAAAAWKNSFQRLLGDVREVRDA 7388
Score = 198 bits (503), Expect = 3e-48
Identities = 123/213 (57%), Positives = 139/213 (64%), Gaps = 46/213 (21%)
Frame = +3
Query: 900 MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGS-GTKRALIQCAKDIAKAS 958
+AAR LH E R+WSSK N+IIAAAKRMA+LMA +S LV S G+KR LI AK IA+AS
Sbjct: 7728 IAARGLHQEVRQWSSKDNEIIAAAKRMAILMARLSELVLSDSRGSKRELIATAKKIAEAS 7907
Query: 959 DEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQ 1018
++VTRLAKE+A+QCTD+RIRTNLLQVCERIPTI TQLKILSTVKATMLG SDE+ E
Sbjct: 7908 EDVTRLAKELARQCTDRRIRTNLLQVCERIPTIGTQLKILSTVKATMLGAQG-SDEDRE- 8081
Query: 1019 ATEMLVHNAQNLMQS--------------------------------------------V 1034
ATEMLV NAQNLMQS V
Sbjct: 8082 ATEMLVGNAQNLMQSVSLEMLSNCLAKFTGRSRHS*SFWALPLPVPFHC*ILSFYVRFQV 8261
Query: 1035 KETVREAEAASIKIRTD-AGFTLRWVRKTPWYQ 1066
KETVR AE ASIKIR+D L+WVR+ PWYQ
Sbjct: 8262 KETVRAAEGASIKIRSDQTSNRLQWVRRQPWYQ 8360
Score = 42.0 bits (97), Expect = 0.34
Identities = 18/21 (85%), Positives = 21/21 (99%)
Frame = +3
Query: 1 MPVFHTRTIESILEPVAQQIS 21
MPVFHT+TIESIL+PVAQQ+S
Sbjct: 2961 MPVFHTKTIESILDPVAQQVS 3023
>emb|AL009193.1|DMC103B4 Drosophila melanogaster cosmid clone 103B4
Length = 26697
Score = 348 bits (892), Expect = 2e-93
Identities = 193/473 (40%), Positives = 286/473 (59%), Gaps = 4/473 (0%)
Frame = -3
Query: 15 PVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDM 74
P +Q+S LVI+HEE E DG A+PDL+ PV V AAV+NLV+VG++T+ +++D+IL++DM
Sbjct: 21427 PRDRQVSRLVILHEEAE-DGNAMPDLSRPVQVVSAAVANLVKVGRDTINSSDDKILRQDM 21251
Query: 75 PPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKI 134
P A +VE A L +A+ ML+SDPYS PAR LI+GSRGIL GTS LLL FDE+EVRKI
Sbjct: 21250 PSALHRVEGASQLLEEASDMLRSDPYSGPARKKLIEGSRGILQGTSSLLLCFDESEVRKI 21071
Query: 135 IRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNS 194
I+ CK +L+YL VAEV+ TME LV + K+L P ++K+ + + R++ELTHQ H +LV
Sbjct: 21070 IQECKRVLDYLAVAEVINTMEQLVQFLKDLSPCLSKVHREVGAREKELTHQVHSEILVRC 20891
Query: 195 MNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWD 254
+ VK L P+LI +MK+++ + +G EEA +NRN+ +MS E+ EIIRVLQLT++D
Sbjct: 20890 LEQVKTLAPILICSMKVYIHIVEQQGRGAEEAAENRNYLAARMSDELQEIIRVLQLTTYD 20711
Query: 255 EDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCA 314
ED + +K+ +I +K+ QA WL +P A G GE+A+RQ++D A ++ E C
Sbjct: 20710 EDTSELDNLTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISERCL 20531
Query: 315 GKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKL 374
++ I + M + + +LR G+G SP A + + + L + V A +
Sbjct: 20530 PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAVLGV 20351
Query: 375 E--AMTNSKQSIAKKIDAAQNWLADP--NGGPEGEEQIRGALAEARKIAELCDDPKERDD 430
+ + + +I +++ A WL P N G GE I + E RK+AE C ++
Sbjct: 20350 DKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK--- 20180
Query: 431 ILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVAN 483
EI L ++ L+RQ G P A+ AKQ+ L L+ A+ N
Sbjct: 20179 -----AEIQQLCDEVERLKRQAAGSGPAAKQAAKQLTQKLYELKAAIQNALVN 20036
Score = 258 bits (658), Expect = 3e-66
Identities = 154/477 (32%), Positives = 258/477 (53%), Gaps = 6/477 (1%)
Frame = -3
Query: 364 TAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNG--GPEGEEQIRGALAEARKIAEL 421
T++++N L + +I+ K++ A WL++P G GE+ +R + A +I+E
Sbjct: 20704 TSELDN----LTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISER 20537
Query: 422 CDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRAV 481
C P++ I + E++A+ + L +LR++GKG SP+A +L + + + L++ ++AV
Sbjct: 20536 CL-PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAV 20360
Query: 482 ANSRPA---KAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYR 538
A + A ++G++EQA +W+ +P ++D G+G+ AI +V EG ++A G +
Sbjct: 20359 LGVDKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK 20180
Query: 539 QDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDV 598
++ CD V + G P A+ A QL L +LKA +Q A+ +
Sbjct: 20179 AEIQQLCDEVERLKR-------QAAGSGPAAKQAAKQLTQKLYELKAAIQNALVNRIVQD 20021
Query: 599 FSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTV 658
F D +TP+K A P P RE+ F++++ N + S +
Sbjct: 20020 FMDVSTPLKQFTEAVLQPEGTPGREQNFNQKSNNLQAFSDRASKTSRMVAAGGACGNKKI 19841
Query: 659 -EGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAI 717
E + +S LTPQ++SA RI + PG++AA EH + +K Q+ D V +M L D+A
Sbjct: 19840 AEILLSSAAQVDSLTPQLISAGRIRMNYPGSKAADEHLQNLKQQYADTVLRMRTLCDQAT 19661
Query: 718 DTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDP 777
D + SEE ++ C+ A+ QPQ +V ++IAR NR+LLVAK+E +NSEDP
Sbjct: 19660 DPADFIKTSEEHMQVYAKLCEDAIHARQPQKMVDNTSNIARLINRVLLVAKQEADNSEDP 19481
Query: 778 KFREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA 834
F E + AA++ L +++ MV DAK VA NI+DP ++ +S R+LG V +VR+A
Sbjct: 19480 VFTERLNAAANRLERSLPAMVGDAKLVATNIADPAAAAAWKNSFQRLLGDVREVRDA 19310
Score = 198 bits (503), Expect = 3e-48
Identities = 123/213 (57%), Positives = 139/213 (64%), Gaps = 46/213 (21%)
Frame = -3
Query: 900 MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGS-GTKRALIQCAKDIAKAS 958
+AAR LH E R+WSSK N+IIAAAKRMA+LMA +S LV S G+KR LI AK IA+AS
Sbjct: 18970 IAARGLHQEVRQWSSKDNEIIAAAKRMAILMARLSELVLSDSRGSKRELIATAKKIAEAS 18791
Query: 959 DEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQ 1018
++VTRLAKE+A+QCTD+RIRTNLLQVCERIPTI TQLKILSTVKATMLG SDE+ E
Sbjct: 18790 EDVTRLAKELARQCTDRRIRTNLLQVCERIPTIGTQLKILSTVKATMLGAQG-SDEDRE- 18617
Query: 1019 ATEMLVHNAQNLMQS--------------------------------------------V 1034
ATEMLV NAQNLMQS V
Sbjct: 18616 ATEMLVGNAQNLMQSVSLEMLSNCLAKFTGRSRHS*SFWALPLPVPFHC*ILSFYVRFQV 18437
Query: 1035 KETVREAEAASIKIRTD-AGFTLRWVRKTPWYQ 1066
KETVR AE ASIKIR+D L+WVR+ PWYQ
Sbjct: 18436 KETVRAAEGASIKIRSDQTSNRLQWVRRQPWYQ 18338
Score = 42.0 bits (97), Expect = 0.34
Identities = 18/21 (85%), Positives = 21/21 (99%)
Frame = -3
Query: 1 MPVFHTRTIESILEPVAQQIS 21
MPVFHT+TIESIL+PVAQQ+S
Sbjct: 23737 MPVFHTKTIESILDPVAQQVS 23675
>gb|AC104149.6| Drosophila melanogaster X BAC RP98-48O22 (Roswell Park Cancer Institute
Drosophila BAC Library) complete sequence
Length = 193714
Score = 348 bits (892), Expect = 2e-93
Identities = 193/473 (40%), Positives = 286/473 (59%), Gaps = 4/473 (0%)
Frame = -1
Query: 15 PVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDM 74
P +Q+S LVI+HEE E DG A+PDL+ PV V AAV+NLV+VG++T+ +++D+IL++DM
Sbjct: 51007 PRDRQVSRLVILHEEAE-DGNAMPDLSRPVQVVSAAVANLVKVGRDTINSSDDKILRQDM 50831
Query: 75 PPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKI 134
P A +VE A L +A+ ML+SDPYS PAR LI+GSRGIL GTS LLL FDE+EVRKI
Sbjct: 50830 PSALHRVEGASQLLEEASDMLRSDPYSGPARKKLIEGSRGILQGTSSLLLCFDESEVRKI 50651
Query: 135 IRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNS 194
I+ CK +L+YL VAEV+ TME LV + K+L P ++K+ + + R++ELTHQ H +LV
Sbjct: 50650 IQECKRVLDYLAVAEVINTMEQLVQFLKDLSPCLSKVHREVGAREKELTHQVHSEILVRC 50471
Query: 195 MNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWD 254
+ VK L P+LI +MK+++ + +G EEA +NRN+ +MS E+ EIIRVLQLT++D
Sbjct: 50470 LEQVKTLAPILICSMKVYIHIVEQQGRGAEEAAENRNYLAARMSDELQEIIRVLQLTTYD 50291
Query: 255 EDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCA 314
ED + +K+ +I +K+ QA WL +P A G GE+A+RQ++D A ++ E C
Sbjct: 50290 EDTSELDNLTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISERCL 50111
Query: 315 GKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKL 374
++ I + M + + +LR G+G SP A + + + L + V A +
Sbjct: 50110 PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAVLGV 49931
Query: 375 E--AMTNSKQSIAKKIDAAQNWLADP--NGGPEGEEQIRGALAEARKIAELCDDPKERDD 430
+ + + +I +++ A WL P N G GE I + E RK+AE C ++
Sbjct: 49930 DKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK--- 49760
Query: 431 ILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVAN 483
EI L ++ L+RQ G P A+ AKQ+ L L+ A+ N
Sbjct: 49759 -----AEIQQLCDEVERLKRQAAGSGPAAKQAAKQLTQKLYELKAAIQNALVN 49616
Score = 258 bits (658), Expect = 3e-66
Identities = 154/477 (32%), Positives = 258/477 (53%), Gaps = 6/477 (1%)
Frame = -1
Query: 364 TAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNG--GPEGEEQIRGALAEARKIAEL 421
T++++N L + +I+ K++ A WL++P G GE+ +R + A +I+E
Sbjct: 50284 TSELDN----LTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISER 50117
Query: 422 CDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRAV 481
C P++ I + E++A+ + L +LR++GKG SP+A +L + + + L++ ++AV
Sbjct: 50116 CL-PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAV 49940
Query: 482 ANSRPA---KAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYR 538
A + A ++G++EQA +W+ +P ++D G+G+ AI +V EG ++A G +
Sbjct: 49939 LGVDKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK 49760
Query: 539 QDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDV 598
++ CD V + G P A+ A QL L +LKA +Q A+ +
Sbjct: 49759 AEIQQLCDEVERLKR-------QAAGSGPAAKQAAKQLTQKLYELKAAIQNALVNRIVQD 49601
Query: 599 FSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTV 658
F D +TP+K A P P RE+ F++++ N + S +
Sbjct: 49600 FMDVSTPLKQFTEAVLQPEGTPGREQNFNQKSNNLQAFSDRASKTSRMVAAGGACGNKKI 49421
Query: 659 -EGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAI 717
E + +S LTPQ++SA RI + PG++AA EH + +K Q+ D V +M L D+A
Sbjct: 49420 AEILLSSAAQVDSLTPQLISAGRIRMNYPGSKAADEHLQNLKQQYADTVLRMRTLCDQAT 49241
Query: 718 DTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDP 777
D + SEE ++ C+ A+ QPQ +V ++IAR NR+LLVAK+E +NSEDP
Sbjct: 49240 DPADFIKTSEEHMQVYAKLCEDAIHARQPQKMVDNTSNIARLINRVLLVAKQEADNSEDP 49061
Query: 778 KFREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA 834
F E + AA++ L +++ MV DAK VA NI+DP ++ +S R+LG V +VR+A
Sbjct: 49060 VFTERLNAAANRLERSLPAMVGDAKLVATNIADPAAAAAWKNSFQRLLGDVREVRDA 48890
Score = 198 bits (503), Expect = 3e-48
Identities = 123/213 (57%), Positives = 139/213 (64%), Gaps = 46/213 (21%)
Frame = -1
Query: 900 MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGS-GTKRALIQCAKDIAKAS 958
+AAR LH E R+WSSK N+IIAAAKRMA+LMA +S LV S G+KR LI AK IA+AS
Sbjct: 48550 IAARGLHQEVRQWSSKDNEIIAAAKRMAILMARLSELVLSDSRGSKRELIATAKKIAEAS 48371
Query: 959 DEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQ 1018
++VTRLAKE+A+QCTD+RIRTNLLQVCERIPTI TQLKILSTVKATMLG SDE+ E
Sbjct: 48370 EDVTRLAKELARQCTDRRIRTNLLQVCERIPTIGTQLKILSTVKATMLGAQG-SDEDRE- 48197
Query: 1019 ATEMLVHNAQNLMQS--------------------------------------------V 1034
ATEMLV NAQNLMQS V
Sbjct: 48196 ATEMLVGNAQNLMQSVSLEMLSNCLAKFTGRSRHS*SFWALPLPVPFHC*ILSFYVRFQV 48017
Query: 1035 KETVREAEAASIKIRTD-AGFTLRWVRKTPWYQ 1066
KETVR AE ASIKIR+D L+WVR+ PWYQ
Sbjct: 48016 KETVRAAEGASIKIRSDQTSNRLQWVRRQPWYQ 47918
Score = 42.0 bits (97), Expect = 0.34
Identities = 18/21 (85%), Positives = 21/21 (99%)
Frame = -1
Query: 1 MPVFHTRTIESILEPVAQQIS 21
MPVFHT+TIESIL+PVAQQ+S
Sbjct: 53326 MPVFHTKTIESILDPVAQQVS 53264
>emb|X96601.1|DMVIN D.melanogaster vinculin gene
Length = 8171
Score = 345 bits (885), Expect = 1e-92
Identities = 191/473 (40%), Positives = 286/473 (60%), Gaps = 4/473 (0%)
Frame = +1
Query: 15 PVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDM 74
P +Q+S LVI+HEE E DG A+PDL+ PV V AAV+NLV+VG++T+ +++D+IL++DM
Sbjct: 4333 PRDRQVSRLVILHEEAE-DGNAMPDLSRPVQVVSAAVANLVKVGRDTINSSDDKILRQDM 4509
Query: 75 PPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKI 134
P A +VE A L +A+ +++SDPYS PAR LI+GSRGIL GTS LLL FDE+EVRKI
Sbjct: 4510 PSALHRVEGASQLLEEASDIVRSDPYSGPARKKLIEGSRGILQGTSSLLLCFDESEVRKI 4689
Query: 135 IRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNS 194
I+ CK +L+YL VAEV+ TME LV + K+L P ++K+ + + R++ELTHQ H +LV
Sbjct: 4690 IQECKRVLDYLAVAEVINTMEQLVQFLKDLSPCLSKVHREVGAREKELTHQVHSEILVRC 4869
Query: 195 MNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWD 254
+ VK L P+LI +MK+++ + +G EEA +NRN+ +MS E+ EIIRVLQLT++D
Sbjct: 4870 LEQVKTLAPILICSMKVYIHIVEQQGRGAEEAAENRNYLAARMSDELQEIIRVLQLTTYD 5049
Query: 255 EDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCA 314
ED + +K+ +I +K+ QA WL +P A G GE+A+RQ++D A ++ E C
Sbjct: 5050 EDTSELDNLTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISERCL 5229
Query: 315 GKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKL 374
++ I + M + + +LR G+G SP A + + + L + V A +
Sbjct: 5230 PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAVLGV 5409
Query: 375 E--AMTNSKQSIAKKIDAAQNWLADP--NGGPEGEEQIRGALAEARKIAELCDDPKERDD 430
+ + + +I +++ A WL P N G GE I + E RK+AE C ++
Sbjct: 5410 DKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK--- 5580
Query: 431 ILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVAN 483
EI L ++ L+RQ G P A+ AKQ+ L L+ A+ N
Sbjct: 5581 -----AEIQQLCDEVERLKRQAAGSGPAAKQAAKQLTQKLYELKAAIQNALVN 5724
Score = 257 bits (656), Expect = 5e-66
Identities = 154/477 (32%), Positives = 258/477 (53%), Gaps = 6/477 (1%)
Frame = +1
Query: 364 TAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNG--GPEGEEQIRGALAEARKIAEL 421
T++++N L + +I+ K++ A WL++P G GE+ +R + A +I+E
Sbjct: 5056 TSELDN----LTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISER 5223
Query: 422 CDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRAV 481
C P++ I + E++A+ + L +LR++GKG SP+A +L + + + L++ ++AV
Sbjct: 5224 CL-PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAV 5400
Query: 482 ANSRPA---KAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYR 538
A + A ++G++EQA +W+ +P ++D G+G+ AI +V EG ++A G +
Sbjct: 5401 LGVDKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK 5580
Query: 539 QDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDV 598
++ CD V + G P A+ A QL L +LKA +Q A+ +
Sbjct: 5581 AEIQQLCDEVERLKR-------QAAGSGPAAKQAAKQLTQKLYELKAAIQNALVNRIVQD 5739
Query: 599 FSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTV 658
F D +TP+K A P P RE+ F++++ N + S +
Sbjct: 5740 FMDVSTPLKQFTEAVLQPEGTPGREQNFNQKSNNLQAFSDRASKTSRMVAAGGACGNKKI 5919
Query: 659 -EGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAI 717
E + +S LTPQ++SA RI + PG++AA EH + +K Q+ D V +M L D+A
Sbjct: 5920 AEILLSSAAQVDSLTPQLISAGRIRMNYPGSKAADEHLQNLKQQYADTVLRMRTLCDQAT 6099
Query: 718 DTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDP 777
D + SEE ++ C+ A+ QPQ +V ++IAR NR+LLVAK+E +NSEDP
Sbjct: 6100 DPADFIKTSEEHMQVYAKLCEDAIHARQPQKMVDNTSNIARLINRVLLVAKQEADNSEDP 6279
Query: 778 KFREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA 834
F E + AA++ L +++ MV DAK VA NI+DP ++ +S R+LG V +VR+A
Sbjct: 6280 VFTERLNAAANRLERSLPAMVGDAKLVATNIADPRAAAAWKNSFQRLLGDVREVRDA 6450
Score = 198 bits (503), Expect = 3e-48
Identities = 123/213 (57%), Positives = 139/213 (64%), Gaps = 46/213 (21%)
Frame = +2
Query: 900 MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGS-GTKRALIQCAKDIAKAS 958
+AAR LH E R+WSSK N+IIAAAKRMA+LMA +S LV S G+KR LI AK IA+AS
Sbjct: 6794 IAARGLHQEVRQWSSKDNEIIAAAKRMAILMARLSELVLSDSRGSKRELIATAKKIAEAS 6973
Query: 959 DEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQ 1018
++VTRLAKE+A+QCTD+RIRTNLLQVCERIPTI TQLKILSTVKATMLG SDE+ E
Sbjct: 6974 EDVTRLAKELARQCTDRRIRTNLLQVCERIPTIGTQLKILSTVKATMLGAQG-SDEDRE- 7147
Query: 1019 ATEMLVHNAQNLMQS--------------------------------------------V 1034
ATEMLV NAQNLMQS V
Sbjct: 7148 ATEMLVGNAQNLMQSVSLEMLSNCLAKFTGRSCHS*SFWALPLPVPFHC*ILSFIVRFQV 7327
Query: 1035 KETVREAEAASIKIRTD-AGFTLRWVRKTPWYQ 1066
KETVR AE ASIKIR+D L+WVR+ PWYQ
Sbjct: 7328 KETVRAAEGASIKIRSDQTSNRLQWVRRQPWYQ 7426
Score = 39.3 bits (90), Expect = 2.2
Identities = 17/19 (89%), Positives = 19/19 (99%)
Frame = +1
Query: 1 MPVFHTRTIESILEPVAQQ 19
MPVFHT+TIESIL+PVAQQ
Sbjct: 2029 MPVFHTKTIESILDPVAQQ 2085
>emb|Z19540.1|SSMTVINA S.scrofa metavinculin cDNA
Length = 676
Score = 322 bits (826), Expect = 1e-85
Identities = 165/177 (93%), Positives = 171/177 (96%)
Frame = +1
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQ 949
+ + +NQP++ AA+ LH EA KWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQ
Sbjct: 142 SSQPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQ 321
Query: 950 CAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRT 1009
CAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRT
Sbjct: 322 CAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRT 501
Query: 1010 NISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
NISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 502 NISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 672
>emb|Z19541.1|XLMTVINA X.laevis metavinculin cDNA
Length = 748
Score = 321 bits (823), Expect = 2e-85
Identities = 164/176 (93%), Positives = 169/176 (95%)
Frame = +1
Query: 891 GEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQC 950
G+ +NQPM+ AA+ LH EA KWSSKGNDIIAAAKRMALLMAEMSRLVRGGSG KRALIQC
Sbjct: 178 GQPVNQPMLAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQC 357
Query: 951 AKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTN 1010
AKDIAKASDEVT+LAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTN
Sbjct: 358 AKDIAKASDEVTKLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTN 537
Query: 1011 ISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
ISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRW RKTPWYQ
Sbjct: 538 ISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWARKTPWYQ 705
>gb|AC084630.1|CBRG45E13 Caenorhabditis briggsae cosmid G45E13, complete sequence
Length = 39246
Score = 246 bits (629), Expect = 7e-63
Identities = 146/381 (38%), Positives = 219/381 (57%), Gaps = 17/381 (4%)
Frame = -3
Query: 57 VGKETVQTTEDQILKRDMPPAFIKVENACTKLVQAAQML----------------QSDPY 100
VG +T ++D+IL++DMPPA +VE + L +++ L Q DPY
Sbjct: 37654 VGYDTCDHSDDRILQQDMPPALQRVEGSSKLLEESSYSLKVRRTQN*FHPLKNAFQHDPY 37475
Query: 101 SVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTY 160
SVPAR LIDG+RGIL GTS LLL FDE+EVRKIIR+C+ + +Y+ V+EV+E+M DL +
Sbjct: 37474 SVPARKKLIDGARGILQGTSALLLCFDESEVRKIIRICRKVNDYVAVSEVIESMADLQQF 37295
Query: 161 TKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKN-SK 219
K++ P + + ++ RQQELTHQ HR +L+ ++++K + PVLI +MK + N
Sbjct: 37294 VKDISPVLHDVTNDVNLRQQELTHQVHREILIRCLDSIKTIAPVLICSMKTSIELGNPHP 37115
Query: 220 NQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQ 279
QG EA+ NRNF ++M+ E+NEIIRVLQLT++DED W + + M++AL++ S L
Sbjct: 37114 RQGHAEAVANRNFMSQRMTEEMNEIIRVLQLTTYDEDEWDADNVTVMRKALSAAKSLLTA 36935
Query: 280 AKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLR 339
A WL DP A PG GE+AIR+I + A ++ ++ + I + + TD++ +LR
Sbjct: 36934 ALDWLADPQARPGAVGEKAIRRICEYAERIAARALPEDAQSIKRSIFEITSFTDELCNLR 36755
Query: 340 ARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPN 399
GQ + L A+ AR+L+ + + S DA QN A +
Sbjct: 36754 NNGQ--------------HDRENLAAQ---TARRLKDLVGGQHSSGLMSDALQN--AQRH 36632
Query: 400 GGPEGEEQIRGALAEARKIAE 420
GG G L +A ++ E
Sbjct: 36631 GGANPAHTAAGRLEQAMRLVE 36569
Score = 141 bits (355), Expect = 4e-31
Identities = 82/163 (50%), Positives = 107/163 (65%), Gaps = 17/163 (10%)
Frame = -1
Query: 895 NQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDI 954
+QPM+ AA LH+E ++WSS+ NDI+AAAKRMA+LMA +S+LVRG GTK+ LI C+K I
Sbjct: 33153 HQPMLAAAHNLHNELKQWSSQENDIVAAAKRMAILMARLSQLVRGEGGTKKDLINCSKAI 32974
Query: 955 AKASDEVTRLAKEVAKQCTDKRIRT---------------NLLQVCERIPTISTQLKILS 999
A +S+EVTRLA ++A+ CTD ++RT LLQV ERIPTI+TQLK+LS
Sbjct: 32973 ADSSEEVTRLAVQLARLCTDIKMRTVRNTTF*IL*FSNFQALLQVSERIPTIATQLKVLS 32794
Query: 1000 TVKATMLGRTNISDEESEQATEMLVHNA--QNLMQSVKETVRE 1040
TVKATMLG S E L H + +V ET+ +
Sbjct: 32793 TVKATMLG--------SASEFEALYHELS*HEMYSNVTETITD 32689
Score = 106 bits (264), Expect = 1e-20
Identities = 85/348 (24%), Positives = 141/348 (40%), Gaps = 94/348 (27%)
Frame = -2
Query: 537 YRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVS 596
+R LL C + RG G SP+A+ + +QL+++L+DL M+ +T V
Sbjct: 36317 FRNRLLGLCSDIDRLAAQLADLERRGLGNSPEAQQIRNQLRNALRDLGDFMRRVLTDRVV 36138
Query: 597 ----------------------------DVFSDTTTPIKLLAVAATAPPDAPNREEVFDE 628
D F+D TTP+K A A P PNRE+ F +
Sbjct: 36137 SFSFIFCFPLCRIISENYNKNQGF*FQVDDFADITTPLKQFVEAVHADPYDPNREQNFVD 35958
Query: 629 RAANFENHSXXXXXXXXXXXXXX-XXXXSTVEGIQASVKTARELTPQVVSAARILLRNPG 687
++ +HS TVE I + + +LTPQ+V+A R+ L NPG
Sbjct: 35957 KSQRLTDHSQSMTTTARLVASCGPSKSKKTVEAILDTAEKVEQLTPQIVNAGRVRLHNPG 35778
Query: 688 NQAAYEH----------------------------------------FETMKN------- 700
++ +E+ F T+++
Sbjct: 35777 SEQHFENIHK*VYLLLLCGSLFRKFDCL*KALACPKSQFLL**YFFCF*TLRHSKTKNIY 35598
Query: 701 --QWIDNVEKMTGLVDEAIDTKSLLDASE----------------EAIKKDLDKCKVAMA 742
Q+ D + ++ VD+AIDT + ASE +A+++ + C+ A+
Sbjct: 35597 FRQYADALHRLRSHVDDAIDTGEFVRASESVRNIPIIQNNENIKFQAMRRYTNNCEGAIN 35418
Query: 743 NIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDEL 790
+V ++ IAR NR+L+ A+ E +NSE+P F V+ A+D+L
Sbjct: 35417 GGDAHGMVNNSSQIARLGNRVLMTAQNEADNSEEPSFVSRVRNAADQL 35274
Score = 75.1 bits (183), Expect = 4e-11
Identities = 35/51 (68%), Positives = 42/51 (81%)
Frame = -2
Query: 1014 EESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPW 1064
EE ++A + LVHNAQNLMQSVK+ VR AEAASIKIRT++G LRW+RK W
Sbjct: 32483 EEDDEAMQQLVHNAQNLMQSVKDVVRAAEAASIKIRTNSGLRLRWLRKPMW 32331
Score = 46.6 bits (109), Expect = 0.014
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = -1
Query: 19 QISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGK 59
++S LVI+HEE DG A+PDLT PV V AV NL++V K
Sbjct: 38385 KVSRLVILHEEAN-DGNAMPDLTGPVGMVSRAVGNLIQVRK 38266
Score = 40.4 bits (93), Expect = 1.0
Identities = 20/49 (40%), Positives = 32/49 (64%)
Frame = -2
Query: 425 PKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNL 473
P R+ +L +I L ++LADL R+G G+SPEA+ + Q+ AL++L
Sbjct: 36323 PYFRNRLLGLCSDIDRLAAQLADLERRGLGNSPEAQQIRNQLRNALRDL 36177
Score = 37.7 bits (86), Expect = 6.5
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = -1
Query: 502 RWIDNPTVDDRGVGQAAIRGLVAEGHRLAN 531
RW+DNP +DD G+G AIR L A+ +LA+
Sbjct: 36534 RWLDNPGLDDGGLGLQAIRLLTADARKLAD 36445
Score = 36.2 bits (82), Expect(2) = 0.069
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -2
Query: 318 RREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL 360
R +LG C + ++ Q+ADL RG G+SP A Q Q+ L
Sbjct: 36314 RNRLLGLCSDIDRLAAQLADLERRGLGNSPEAQQIRNQLRNAL 36186
Score = 26.9 bits (58), Expect(2) = 0.069
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 283 WLRDPSASPGDAGEQAIRQILDEAGKVGELCAGKERREIL 322
WL +P G G QAIR + +A K+ + ++R IL
Sbjct: 36531 WLDNPGLDDGGLGLQAIRLLTADARKLADRLNPQDR*HIL 36412
>ref|NM_068704.1| Caenorhabditis elegans
Length = 1122
Score = 213 bits (541), Expect = 1e-52
Identities = 113/183 (61%), Positives = 141/183 (76%), Gaps = 13/183 (7%)
Frame = +1
Query: 895 NQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDI 954
+QPM+ AA LH+E ++WSS+ NDI+AAAKRMA+LMA +S+LVRG GTK+ LI C+K I
Sbjct: 562 HQPMLAAAHNLHNELKQWSSQENDIVAAAKRMAILMARLSQLVRGEGGTKKDLINCSKAI 741
Query: 955 AKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTN-ISD 1013
A +S+EVTRLA ++A+ CTD ++RT LLQV ERIPTI+TQLK+LSTVKATMLG ISD
Sbjct: 742 ADSSEEVTRLAVQLARLCTDIKMRTALLQVSERIPTIATQLKVLSTVKATMLGSAKPISD 921
Query: 1014 ------------EESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRK 1061
EE ++A + LVHNAQNLMQSVK+ VR AEAASIKIRT++G LRW+RK
Sbjct: 922 VIGPYGQPVEGSEEDDEAMQQLVHNAQNLMQSVKDVVRAAEAASIKIRTNSGLRLRWLRK 1101
Query: 1062 TPW 1064
W
Sbjct: 1102 PMW 1110
>dbj|D25281.1|MUSANCI Mouse mRNA for alpha N-catenin I, complete cds
Length = 3911
Score = 164 bits (415), Expect = 5e-38
Identities = 175/710 (24%), Positives = 286/710 (39%), Gaps = 50/710 (7%)
Frame = +1
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISA-----LTSKLADLRRQGKGDSPE 458
G+E ++ AR+ EL DP RD++ + G + T+ A LR +
Sbjct: 820 GKEMVKLNYVAARRQQEL-KDPHCRDEMAAARGALKKNATMLYTASQAFLRHPDVAATRA 996
Query: 459 ARALA-KQVATALQNLQTKTNRAVANSRPAKAAVHLE-GKIEQAQRWIDNPTV-DDRGVG 515
R KQV A+ + ++ A A S +A H G++ A DN + D
Sbjct: 997 NRDYVFKQVQEAIAGI---SSAAQATSPTDEAKGHTGIGELAAALNEFDNKIILDPMTFS 1167
Query: 516 QAAIRGLVAEGHRLANVMMGPY------------RQDLLAKCDRVXXXXXXXXXXXXRGE 563
+A R + E RL +++ G R+ ++A+C+ V
Sbjct: 1168 EARFRPSLEE--RLESIISGAALMADSSCTRDDRRERMVAECNAVRQALQDLLSEDMNNT 1341
Query: 564 GESPQARAL---ASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAP 620
G + L ++ +DL+ ++++A+ +SD F +T P+ +L AA +
Sbjct: 1342 GRKEKGDPLNIAIDKMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSG---- 1509
Query: 621 NREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTVEGIQASVKTARELTPQVVSAAR 680
N +EV E A F H+ V+ ++ + L PQV++AA
Sbjct: 1510 NEKEV-KEYAQVFREHANKLVEVANLACSISNNEEG-VKLVRMAATQIDSLCPQVINAAL 1683
Query: 681 ILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVA 740
L P ++ A ++ + K+QW V +T VD+ L SE I +D++KC +A
Sbjct: 1684 TLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCVIA 1863
Query: 741 MANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMD 800
+ L A +I RA R++ + E+EN E + E V A+ LS+T+ P +
Sbjct: 1864 LQEGDVDTLDRTAGAIRGRAARVIHIINAEMENYEAGVYTEKVLEATKLLSETVMPRFAE 2043
Query: 801 -----AKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLT 855
+A++ N+ P + F+D+ + V +R+A R
Sbjct: 2044 QVEVAIEALSANVPQPFEENEFIDASRLVYYGVRDIRKA--------------VLMIRTP 2181
Query: 856 DELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQ-PMMMAAR----------- 903
+EL Q A ++ Q P A+
Sbjct: 2182 EELEDDSDFEQEDYDVRSRTSVQTEDRQLIAGQSARAIMAQLPQEEKAKIAEQVEIFHQE 2361
Query: 904 --QLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASD 959
+L E KW GNDII AK+M ++M EM+ RG K +I AK IA+A
Sbjct: 2362 KSKLDAEVAKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEAGS 2541
Query: 960 EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQA 1019
+ +LA+ VA QC D + +LL +RI QL I S VKA + +
Sbjct: 2542 RMDKLARAVADQCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELIVSGLDS 2721
Query: 1020 TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRWVRKTP 1063
+ L+ A+NLM +V TV+ + AS K + G + W K P
Sbjct: 2722 STSLIQAAKNLMNAVVLTVKASYVASTKYQKVYGTAAVNSPVVSWKMKAP 2871
Score = 82.8 bits (203), Expect = 2e-13
Identities = 86/377 (22%), Positives = 158/377 (41%), Gaps = 8/377 (2%)
Frame = +1
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T T+E +LEP+ Q++ LV +G K A V A+V+ A N + G++ +
Sbjct: 343 TLTVERLLEPLVTQVTTLVNTSNKGPSGKKKGRSKKAHVLAASVEQATQNFLEKGEQIAK 522
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
++D LK ++ A V A+ DP S R ++ +R +LS + LL
Sbjct: 523 ESQD--LKEELVAAVEDVRKQGETKRIASSEFADDPCSSVKRGTMVRAARALLSAVTRLL 696
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V +++ K + E L + +DL K G M K+ + RQQEL
Sbjct: 697 ILADMADVMRLLSHLKIVEEALEAVKNATNEQDLANRFKEFGKEMVKLNYVAARRQQELK 876
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
R + + +K+ +L +A + F+ ++ + NR++ +++ I
Sbjct: 877 DPHCRDEMAAARGALKKNATMLYTASQAFL-----RHPDVAATRANRDYVFKQVQEAIAG 1041
Query: 244 IIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDP----SASPGDAGEQAI 299
I Q TS ++A + AL D+K+ + DP A + E+ +
Sbjct: 1042ISSAAQATSPTDEAKGHTGIGELAAALNEFDNKI------ILDPMTFSEARFRPSLEERL 1203
Query: 300 RQILDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVS 357
I+ A + + C +RRE ++ C + Q + G +K ++
Sbjct: 1204ESIISGAALMADSSCTRDDRRERMVAECNAVRQALQDLLSEDMNNTGRK----EKGDPLN 1371
Query: 358 QGLDVLTAKVENAARKL 374
+D +T K + R+L
Sbjct: 1372IAIDKMTKKTRDLRRQL 1422
>dbj|D11090.1|CHKANC Chicken mRNA for alpha N-catenin, complete cds
Length = 3123
Score = 161 bits (407), Expect = 4e-37
Identities = 177/712 (24%), Positives = 285/712 (39%), Gaps = 52/712 (7%)
Frame = +2
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISA-----LTSKLADLRRQGKGDSPE 458
G+E ++ AR+ EL DP RD++ + G + T+ A LR +
Sbjct: 662 GKEMVKLNYVAARRQQEL-KDPHCRDEMAAARGALKKNATMLYTASQAFLRHPDVAATRA 838
Query: 459 ARALA-KQVATALQNLQTKTNRAVANSRPAKAAVHLE-GKIEQAQRWIDNPTV-DDRGVG 515
R KQV A+ + +N A A S + H G++ A DN + D
Sbjct: 839 NRDYVFKQVQEAIAGI---SNAAQATSPTDENKGHTGIGELAAALNEFDNKIILDPMTFS 1009
Query: 516 QAAIRGLVAEGHRLANVMMGPY------------RQDLLAKCDRVXXXXXXXXXX----- 558
+A R + E RL +++ G R+ ++A+C R
Sbjct: 1010 EARFRPSLEE--RLESIISGAALMADSSCTRDDRRKRIVAECKRAVRQALQDLLSEYMNN 1183
Query: 559 XXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPD 618
R E P A+ ++ +DL+ ++++A+ +SD F +T P+ +L AA +
Sbjct: 1184 TGRKEKGDPLNIAI-DKMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSG-- 1354
Query: 619 APNREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTVEGIQASVKTARELTPQVVSA 678
N +EV E A F H+ V+ ++ + L PQV++A
Sbjct: 1355 --NEKEV-KEYAQVFREHANKLVEVANLACSISNNEEG-VKLVRMAATQIDSLCPQVINA 1522
Query: 679 ARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCK 738
A L P ++ A ++ + K+QW V +T VD+ L SE I +D++KC
Sbjct: 1523 ALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCV 1702
Query: 739 VAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMV 798
+A+ L A +I RA R++ + E+EN E + E V A+ LS+T+ P
Sbjct: 1703 IALQEGDVDTLDRTAGAIRGRAARVIHIINAEMENYETGVYTEKVLEATKLLSETVMPRF 1882
Query: 799 MD-----AKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXR 853
+ +A++ N+ P + F+D+ + V +R+A R
Sbjct: 1883 AEQVEVAIEALSANVPQPFEENEFIDASRLVYDGVRDIRKA--------------VLMIR 2020
Query: 854 LTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQ-PMMMAAR--------- 903
+EL Q A ++ Q P A+
Sbjct: 2021 TPEELEDDSDFEQEDYDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEEKAKIAEQVEIFH 2200
Query: 904 ----QLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKA 957
+L E KW GNDII AK+M ++M EM+ RG K +I AK IA+A
Sbjct: 2201 QEKSKLDAEVAKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEA 2380
Query: 958 SDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESE 1017
+ +LA+ VA QC D + +LL +RI QL I S VKA +
Sbjct: 2381 GSRMDKLARAVADQCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELIVSGL 2560
Query: 1018 QATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRWVRKTP 1063
+ L+ A+NLM +V TV+ + AS K + G + W K P
Sbjct: 2561 DSATSLIQAAKNLMNAVVLTVKASYVASTKYQKVYGTAAVNSPVVSWKMKAP 2716
Score = 80.1 bits (196), Expect = 1e-12
Identities = 84/377 (22%), Positives = 160/377 (42%), Gaps = 8/377 (2%)
Frame = +2
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T T+E +LEP+ Q++ LV +G K A V A+V+ A N + G + +
Sbjct: 185 TLTVERLLEPLVTQVTTLVNTSNKGPSGKKKGRSKKAHVLAASVEQATQNFLEKGDQIAK 364
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
++D LK ++ A V + A+ DP S R ++ +R +LS + LL
Sbjct: 365 ESQD--LKEELVAAVEDVRKQGETMRIASSEFADDPCSSVKRGTMVRAARALLSAVTRLL 538
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V +++ K + E L + +DL K G M K+ + RQQEL
Sbjct: 539 ILADMADVMRLLSHLKIVEEALEAVKNATNEQDLANRFKEFGKEMVKLNYVAARRQQELK 718
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
R + + +K+ +L +A + F+ ++ + NR++ +++ I
Sbjct: 719 DPHCRDEMAAARGALKKNATMLYTASQAFL-----RHPDVAATRANRDYVFKQVQEAIAG 883
Query: 244 IIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDP----SASPGDAGEQAI 299
I Q TS ++ + AL D+K+ + DP A + E+ +
Sbjct: 884 ISNAAQATSPTDENKGHTGIGELAAALNEFDNKI------ILDPMTFSEARFRPSLEERL 1045
Query: 300 RQILDEAGKVGELCAGKE--RREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVS 357
I+ A + + ++ R+ I+ CK + + DL + ++ +K ++
Sbjct: 1046ESIISGAALMADSSCTRDDRRKRIVAECKR--AVRQALQDLLSEYMNNTG-RKEKGDPLN 1216
Query: 358 QGLDVLTAKVENAARKL 374
+D +T K + R+L
Sbjct: 1217IAIDKMTKKTRDLRRQL 1267
>gb|U34687.1|LVU34687 Lytechinus variegatus alpha catenin mRNA, complete cds
Length = 2930
Score = 158 bits (399), Expect = 3e-36
Identities = 166/682 (24%), Positives = 278/682 (40%), Gaps = 42/682 (6%)
Frame = +3
Query: 424 DPKERDDILRSLGEISA-----LTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTN 478
DP+ RD++ + ++ T+ A LR D P AR V L++ +
Sbjct: 699 DPRRRDEMAAARADLRKHSTMLFTASKAWLRHP---DVPAARENRDYVVKQLEDAMNAIS 869
Query: 479 RAVANSRPAKAAVHLEGKIEQAQRWID-NPTVDDRGVGQAAIRGLVAEGHRLANVMMGPY 537
+ + A ++EG E + + + V +R + RL +++ G
Sbjct: 870 NVSQATGDSSANPNIEGSGELIAALDELDKKIKMSPVEYNEVRTRPSLEERLESIISGAA 1049
Query: 538 ------------RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQ---DSLKD 582
R+ ++A+C+ V G ++ L ++ KD
Sbjct: 1050 LMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMNCAGSRDRSDPLDEAIERMCKKTKD 1229
Query: 583 LKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXX 642
L+ ++++A+ VSD F +T P+ +L VAA + N EV ++ A F+ H+
Sbjct: 1230 LRRQLRKAVVDHVSDSFLETNVPLLVLIVAAKSG----NEAEV-EKYAKVFQEHANKLVE 1394
Query: 643 XXXXXXXXXXXXXSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQW 702
V+ ++ + L PQV++AARIL+ P ++AA ++ + K+QW
Sbjct: 1395 VANLACSMSNNEEG-VKMVRMAATQIENLCPQVINAARILVARPRSKAAQDNMDVFKDQW 1571
Query: 703 IDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANR 762
V +T VDE L SE I +D+++C +A+ P+ L A S+ R+ R
Sbjct: 1572 ETQVRLLTEAVDEITTIDDFLAVSESHILEDVNRCVMALHQQDPETLDLTANSVKGRSAR 1751
Query: 763 ILLVAKREVENSE----DPKFREAVKAASDELSKTISPMV-MDAKAVAGNISDPGLQKSF 817
I V E+ N E K +EAV +E+ S MV + A++ + F
Sbjct: 1752 ICTVVNSEMLNYEPGLYTDKVKEAVNILKNEVIPHFSNMVEIAVDALSSQPPKDTEENEF 1931
Query: 818 LDSGYRILGAVAKVREAXXXXXX-XXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXX 876
+D+ + V ++R A D +
Sbjct: 1932 VDASRMVYDGVREIRRAVLMNRNPDEIETDTEVDYEEEYDVKSKSSYQTEPYELEDVQEG 2111
Query: 877 XXXXXXXXXXXQKAGEVINQPMMMAARQ---LHDEARKWSSKGNDIIAAAKRMALLMAEM 933
+ E I + + + ++ L E KW GNDII A++M ++M EM
Sbjct: 2112 VTSRAMMRDLPPEEKEKIKEQVELFRQEKEKLDLEMAKWDDSGNDIIILARQMCMIMMEM 2291
Query: 934 SRLVRGGSGTKRAL--IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTI 991
+ RG K + I AK IA+ ++ +LA+++A QC D + +LL +RI
Sbjct: 2292 TDFTRGKGKLKTTMDVINAAKRIAETGTKLDKLARQIADQCPDSSSKEDLLAYLQRIALY 2471
Query: 992 STQLKILSTVKATMLGRTNISDE---ESEQATEMLVHNAQNLMQSVKETVREAEAASIKI 1048
QL I S VKA + NIS E + L+ A+NLM SV +TV+ + AS K
Sbjct: 2472 CHQLNITSKVKAEI---QNISGELVLSGLDSATSLIQAAKNLMGSVVQTVKASYVASTKF 2642
Query: 1049 R-------TDAGFTLRWVRKTP 1063
R T A + W K P
Sbjct: 2643 RSKMQGAGTTASPVVLWKMKAP 2708
>gb|BC000385.1|BC000385 Homo sapiens, clone MGC:8429 IMAGE:2821111, mRNA, complete cds
Length = 3440
Score = 156 bits (395), Expect = 1e-35
Identities = 137/545 (25%), Positives = 220/545 (40%), Gaps = 19/545 (3%)
Frame = +3
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKARMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ ++++A+
Sbjct: 1062 RERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1241
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXX 654
VSD F +T P+ +L AA N +EV E A F H+
Sbjct: 1242 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISNNE 1406
Query: 655 XSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
V+ ++ S L PQV++AA L P ++ A E+ + K QW V +T VD
Sbjct: 1407 EG-VKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVD 1583
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1584 DITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNY 1763
Query: 775 EDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVA 829
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1764 EPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIR 1943
Query: 830 KVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 889
+R+A K
Sbjct: 1944 DIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAK 2123
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--L 947
E + +L E KW GNDII AK+M ++M EM+ RG K +
Sbjct: 2124 IAEQV-ASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDV 2300
Query: 948 IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---T 1004
I AK IA+A + +L + +A C D + +LL +RI QL I S VKA
Sbjct: 2301 ISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQN 2480
Query: 1005 MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRW 1058
+ G +S +S + L+ A+NLM +V +TV+ + AS K + G + W
Sbjct: 2481 LGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSW 2651
Query: 1059 VRKTP 1063
K P
Sbjct: 2652 KMKAP 2666
Score = 76.6 bits (187), Expect = 1e-11
Identities = 85/378 (22%), Positives = 166/378 (43%), Gaps = 9/378 (2%)
Frame = +3
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 138 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 317
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 318 --ESQFLKEELVAAVEDVRKQGDLMKAAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 491
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 492 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELK 671
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
HR + + +++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 672 DVGHRDQMAAARGILQKNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 836
Query: 244 IIRVLQLTSWDE-DAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGD----AGEQA 298
I Q T+ D+ + AL + D ++ + DP + + + E+
Sbjct: 837 ISNAAQATASDDASQHQGGGGGELAYALNNFDKQI------IVDPLSFSEERFRPSLEER 998
Query: 299 IRQILDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQV 356
+ I+ A + + C +RRE I+ C + Q + DL + G++ +++ +
Sbjct: 999 LESIISGAALMADSSCTRDDRRERIVAECNAVRQ---ALQDLLSEYMGNAG-RKERSDAL 1166
Query: 357 SQGLDVLTAKVENAARKL 374
+ +D +T K + R+L
Sbjct: 1167NSAIDKMTKKTRDLRRQL 1220
>dbj|D90362.1|MUSCAP102 Mouse mRNA for cadherin-associated protein (CAP102/alpha catenin)
Length = 3668
Score = 156 bits (395), Expect = 1e-35
Identities = 137/545 (25%), Positives = 220/545 (40%), Gaps = 19/545 (3%)
Frame = +1
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKARMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ ++++A+
Sbjct: 1051 RERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1230
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXX 654
VSD F +T P+ +L AA N +EV E A F H+
Sbjct: 1231 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISNNE 1395
Query: 655 XSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
V+ ++ S L PQV++AA L P ++ A E+ + K QW V +T VD
Sbjct: 1396 EG-VKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVD 1572
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1573 DITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNY 1752
Query: 775 EDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVA 829
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1753 EPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIR 1932
Query: 830 KVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 889
+R+A K
Sbjct: 1933 DIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAK 2112
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--L 947
E + +L E KW GNDII AK+M ++M EM+ RG K +
Sbjct: 2113 IAEQV-ASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDV 2289
Query: 948 IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---T 1004
I AK IA+A + +L + +A C D + +LL +RI QL I S VKA
Sbjct: 2290 ISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQN 2469
Query: 1005 MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRW 1058
+ G +S +S + L+ A+NLM +V +TV+ + AS K + G + W
Sbjct: 2470 LGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSW 2640
Query: 1059 VRKTP 1063
K P
Sbjct: 2641 KMKAP 2655
Score = 76.3 bits (186), Expect = 2e-11
Identities = 85/378 (22%), Positives = 168/378 (43%), Gaps = 9/378 (2%)
Frame = +1
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 127 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 306
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 307 --ESQFLKEELVVAVEDVRKQGDLMKSAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 480
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 481 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELK 660
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
+R + + +++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 661 DVGNRDQMAAARGILQKNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 825
Query: 244 IIRVLQLTSWDEDAWASKDTEA-MKRALASIDSKLNQAKGWLRDPSASPGD----AGEQA 298
I Q T+ D+ A + + AL + D ++ + DP + + + E+
Sbjct: 826 ISNAAQATASDDAAQHQGGSGGELAYALNNFDKQI------IVDPLSFSEERFRPSLEER 987
Query: 299 IRQILDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQV 356
+ I+ A + + C +RRE I+ C + Q + DL + G++ +++ +
Sbjct: 988 LESIISGAALMADSSCTRDDRRERIVAECNAVRQ---ALQDLLSEYMGNAG-RKERSDAL 1155
Query: 357 SQGLDVLTAKVENAARKL 374
+ +D +T K + R+L
Sbjct: 1156NSAIDKMTKKTRDLRRQL 1209
>dbj|D13866.1|HUMACA Human mRNA for alpha-catenin, complete cds
Length = 3429
Score = 156 bits (395), Expect = 1e-35
Identities = 137/545 (25%), Positives = 220/545 (40%), Gaps = 19/545 (3%)
Frame = +1
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKARMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ ++++A+
Sbjct: 1054 RERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1233
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXX 654
VSD F +T P+ +L AA N +EV E A F H+
Sbjct: 1234 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISNNE 1398
Query: 655 XSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
V+ ++ S L PQV++AA L P ++ A E+ + K QW V +T VD
Sbjct: 1399 EG-VKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVD 1575
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1576 DITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNY 1755
Query: 775 EDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVA 829
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1756 EPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIR 1935
Query: 830 KVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 889
+R+A K
Sbjct: 1936 DIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAK 2115
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--L 947
E + +L E KW GNDII AK+M ++M EM+ RG K +
Sbjct: 2116 IAEQV-ASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDV 2292
Query: 948 IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---T 1004
I AK IA+A + +L + +A C D + +LL +RI QL I S VKA
Sbjct: 2293 ISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQN 2472
Query: 1005 MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRW 1058
+ G +S +S + L+ A+NLM +V +TV+ + AS K + G + W
Sbjct: 2473 LGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSW 2643
Query: 1059 VRKTP 1063
K P
Sbjct: 2644 KMKAP 2658
Score = 76.6 bits (187), Expect = 1e-11
Identities = 85/378 (22%), Positives = 166/378 (43%), Gaps = 9/378 (2%)
Frame = +1
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 130 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 309
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 310 --ESQFLKEELVAAVEDVRKQGDLMKAAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 483
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 484 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELK 663
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
HR + + +++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 664 DVGHRDQMAAARGILQKNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 828
Query: 244 IIRVLQLTSWDE-DAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGD----AGEQA 298
I Q T+ D+ + AL + D ++ + DP + + + E+
Sbjct: 829 ISNAAQATASDDASQHQGGGGGELAYALNNFDKQI------IVDPLSFSEERFRPSLEER 990
Query: 299 IRQILDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQV 356
+ I+ A + + C +RRE I+ C + Q + DL + G++ +++ +
Sbjct: 991 LESIISGAALMADSSCTRDDRRERIVAECNAVRQ---ALQDLLSEYMGNAG-RKERSDAL 1158
Query: 357 SQGLDVLTAKVENAARKL 374
+ +D +T K + R+L
Sbjct: 1159NSAIDKMTKKTRDLRRQL 1212
>ref|XM_038221.1| Homo sapiens catenin (cadherin-associated protein), alpha 1 (102kD)
(CTNNA1), mRNA
Length = 3466
Score = 156 bits (395), Expect = 1e-35
Identities = 137/545 (25%), Positives = 220/545 (40%), Gaps = 19/545 (3%)
Frame = +1
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKARMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ ++++A+
Sbjct: 991 RERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1170
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXX 654
VSD F +T P+ +L AA N +EV E A F H+
Sbjct: 1171 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISNNE 1335
Query: 655 XSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
V+ ++ S L PQV++AA L P ++ A E+ + K QW V +T VD
Sbjct: 1336 EG-VKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVD 1512
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1513 DITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNY 1692
Query: 775 EDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVA 829
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1693 EPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIR 1872
Query: 830 KVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 889
+R+A K
Sbjct: 1873 DIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAK 2052
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--L 947
E + +L E KW GNDII AK+M ++M EM+ RG K +
Sbjct: 2053 IAEQV-ASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDV 2229
Query: 948 IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---T 1004
I AK IA+A + +L + +A C D + +LL +RI QL I S VKA
Sbjct: 2230 ISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQN 2409
Query: 1005 MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRW 1058
+ G +S +S + L+ A+NLM +V +TV+ + AS K + G + W
Sbjct: 2410 LGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSW 2580
Query: 1059 VRKTP 1063
K P
Sbjct: 2581 KMKAP 2595
Score = 76.6 bits (187), Expect = 1e-11
Identities = 85/378 (22%), Positives = 166/378 (43%), Gaps = 9/378 (2%)
Frame = +1
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 67 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 246
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 247 --ESQFLKEELVAAVEDVRKQGDLMKAAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 420
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 421 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELK 600
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
HR + + +++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 601 DVGHRDQMAAARGILQKNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 765
Query: 244 IIRVLQLTSWDE-DAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGD----AGEQA 298
I Q T+ D+ + AL + D ++ + DP + + + E+
Sbjct: 766 ISNAAQATASDDASQHQGGGGGELAYALNNFDKQI------IVDPLSFSEERFRPSLEER 927
Query: 299 IRQILDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQV 356
+ I+ A + + C +RRE I+ C + Q + DL + G++ +++ +
Sbjct: 928 LESIISGAALMADSSCTRDDRRERIVAECNAVRQ---ALQDLLSEYMGNAG-RKERSDAL 1095
Query: 357 SQGLDVLTAKVENAARKL 374
+ +D +T K + R+L
Sbjct: 1096NSAIDKMTKKTRDLRRQL 1149
>ref|NM_009818.1| Mus musculus catenin alpha 1 (Catna1), mRNA
Length = 3713
Score = 156 bits (395), Expect = 1e-35
Identities = 137/545 (25%), Positives = 220/545 (40%), Gaps = 19/545 (3%)
Frame = +1
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKARMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ ++++A+
Sbjct: 1060 RERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1239
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXX 654
VSD F +T P+ +L AA N +EV E A F H+
Sbjct: 1240 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISNNE 1404
Query: 655 XSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
V+ ++ S L PQV++AA L P ++ A E+ + K QW V +T VD
Sbjct: 1405 EG-VKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVD 1581
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1582 DITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNY 1761
Query: 775 EDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVA 829
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1762 EPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIR 1941
Query: 830 KVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 889
+R+A K
Sbjct: 1942 DIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAK 2121
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--L 947
E + +L E KW GNDII AK+M ++M EM+ RG K +
Sbjct: 2122 IAEQV-ASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDV 2298
Query: 948 IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---T 1004
I AK IA+A + +L + +A C D + +LL +RI QL I S VKA
Sbjct: 2299 ISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQN 2478
Query: 1005 MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRW 1058
+ G +S +S + L+ A+NLM +V +TV+ + AS K + G + W
Sbjct: 2479 LGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSW 2649
Query: 1059 VRKTP 1063
K P
Sbjct: 2650 KMKAP 2664
Score = 76.3 bits (186), Expect = 2e-11
Identities = 85/378 (22%), Positives = 168/378 (43%), Gaps = 9/378 (2%)
Frame = +1
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 136 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 315
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 316 --ESQFLKEELVVAVEDVRKQGDLMKSAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 489
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 490 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELK 669
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
+R + + +++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 670 DVGNRDQMAAARGILQKNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 834
Query: 244 IIRVLQLTSWDEDAWASKDTEA-MKRALASIDSKLNQAKGWLRDPSASPGD----AGEQA 298
I Q T+ D+ A + + AL + D ++ + DP + + + E+
Sbjct: 835 ISNAAQATASDDAAQHQGGSGGELAYALNNFDKQI------IVDPLSFSEERFRPSLEER 996
Query: 299 IRQILDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQV 356
+ I+ A + + C +RRE I+ C + Q + DL + G++ +++ +
Sbjct: 997 LESIISGAALMADSSCTRDDRRERIVAECNAVRQ---ALQDLLSEYMGNAG-RKERSDAL 1164
Query: 357 SQGLDVLTAKVENAARKL 374
+ +D +T K + R+L
Sbjct: 1165NSAIDKMTKKTRDLRRQL 1218
>emb|X59990.1|MMALPA M.musculus alpha-catenin gene for alpha-catenin
Length = 3713
Score = 156 bits (395), Expect = 1e-35
Identities = 137/545 (25%), Positives = 220/545 (40%), Gaps = 19/545 (3%)
Frame = +1
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKARMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ ++++A+
Sbjct: 1060 RERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1239
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXX 654
VSD F +T P+ +L AA N +EV E A F H+
Sbjct: 1240 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISNNE 1404
Query: 655 XSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
V+ ++ S L PQV++AA L P ++ A E+ + K QW V +T VD
Sbjct: 1405 EG-VKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVD 1581
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1582 DITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNY 1761
Query: 775 EDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVA 829
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1762 EPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIR 1941
Query: 830 KVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 889
+R+A K
Sbjct: 1942 DIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAK 2121
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--L 947
E + +L E KW GNDII AK+M ++M EM+ RG K +
Sbjct: 2122 IAEQV-ASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDV 2298
Query: 948 IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---T 1004
I AK IA+A + +L + +A C D + +LL +RI QL I S VKA
Sbjct: 2299 ISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQN 2478
Query: 1005 MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRW 1058
+ G +S +S + L+ A+NLM +V +TV+ + AS K + G + W
Sbjct: 2479 LGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSW 2649
Query: 1059 VRKTP 1063
K P
Sbjct: 2650 KMKAP 2664
Score = 76.3 bits (186), Expect = 2e-11
Identities = 85/378 (22%), Positives = 168/378 (43%), Gaps = 9/378 (2%)
Frame = +1
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 136 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 315
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 316 --ESQFLKEELVVAVEDVRKQGDLMKSAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 489
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 490 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELK 669
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
+R + + +++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 670 DVGNRDQMAAARGILQKNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 834
Query: 244 IIRVLQLTSWDEDAWASKDTEA-MKRALASIDSKLNQAKGWLRDPSASPGD----AGEQA 298
I Q T+ D+ A + + AL + D ++ + DP + + + E+
Sbjct: 835 ISNAAQATASDDAAQHQGGSGGELAYALNNFDKQI------IVDPLSFSEERFRPSLEER 996
Query: 299 IRQILDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQV 356
+ I+ A + + C +RRE I+ C + Q + DL + G++ +++ +
Sbjct: 997 LESIISGAALMADSSCTRDDRRERIVAECNAVRQ---ALQDLLSEYMGNAG-RKERSDAL 1164
Query: 357 SQGLDVLTAKVENAARKL 374
+ +D +T K + R+L
Sbjct: 1165NSAIDKMTKKTRDLRRQL 1218
>dbj|AK004623.1|AK004623 Mus musculus adult male lung cDNA, RIKEN full-length enriched
library, clone:1200007A02:catenin alpha 1, full insert
sequence
Length = 3632
Score = 156 bits (395), Expect = 1e-35
Identities = 137/545 (25%), Positives = 220/545 (40%), Gaps = 19/545 (3%)
Frame = +1
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKARMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ ++++A+
Sbjct: 1018 RERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1197
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXX 654
VSD F +T P+ +L AA N +EV E A F H+
Sbjct: 1198 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISNNE 1362
Query: 655 XSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
V+ ++ S L PQV++AA L P ++ A E+ + K QW V +T VD
Sbjct: 1363 EG-VKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVD 1539
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1540 DITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNY 1719
Query: 775 EDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVA 829
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1720 EPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIR 1899
Query: 830 KVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 889
+R+A K
Sbjct: 1900 DIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAK 2079
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--L 947
E + +L E KW GNDII AK+M ++M EM+ RG K +
Sbjct: 2080 IAEQV-ASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDV 2256
Query: 948 IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---T 1004
I AK IA+A + +L + +A C D + +LL +RI QL I S VKA
Sbjct: 2257 ISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQN 2436
Query: 1005 MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRW 1058
+ G +S +S + L+ A+NLM +V +TV+ + AS K + G + W
Sbjct: 2437 LGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSW 2607
Query: 1059 VRKTP 1063
K P
Sbjct: 2608 KMKAP 2622
Score = 76.3 bits (186), Expect = 2e-11
Identities = 85/378 (22%), Positives = 168/378 (43%), Gaps = 9/378 (2%)
Frame = +1
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 94 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 273
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 274 --ESQFLKEELVVAVEDVRKQGDLMKSAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 447
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 448 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELK 627
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
+R + + +++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 628 DVGNRDQMAAARGILQKNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 792
Query: 244 IIRVLQLTSWDEDAWASKDTEA-MKRALASIDSKLNQAKGWLRDPSASPGD----AGEQA 298
I Q T+ D+ A + + AL + D ++ + DP + + + E+
Sbjct: 793 ISNAAQATASDDAAQHQGGSGGELAYALNNFDKQI------IVDPLSFSEERFRPSLEER 954
Query: 299 IRQILDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQV 356
+ I+ A + + C +RRE I+ C + Q + DL + G++ +++ +
Sbjct: 955 LESIISGAALMADSSCTRDDRRERIVAECNAVRQ---ALQDLLSEYMGNAG-RKERSDAL 1122
Query: 357 SQGLDVLTAKVENAARKL 374
+ +D +T K + R+L
Sbjct: 1123NSAIDKMTKKTRDLRRQL 1176
>dbj|D14705.1|HUMALPHAC Human mRNA for alpha-catenin, complete cds
Length = 3433
Score = 154 bits (390), Expect = 4e-35
Identities = 136/545 (24%), Positives = 219/545 (39%), Gaps = 19/545 (3%)
Frame = +2
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKARMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ ++++A+
Sbjct: 1079 RERIVAECNAVRKALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1258
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXX 654
VSD F +T P+ +L AA N +EV E A F H+
Sbjct: 1259 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISNNE 1423
Query: 655 XSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
V+ ++ S L PQV++AA L P ++ A E+ + K QW V +T VD
Sbjct: 1424 EG-VKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVD 1600
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1601 DITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNY 1780
Query: 775 EDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVA 829
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1781 EPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIR 1960
Query: 830 KVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 889
+R+A K
Sbjct: 1961 DIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAK 2140
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--L 947
E + +L E KW GNDII AK+M ++M EM+ RG K +
Sbjct: 2141 IAEQV-ASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDV 2317
Query: 948 IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---T 1004
I AK IA+A + +L + +A C D + +LL +RI L I S VKA
Sbjct: 2318 ISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHHLNICSKVKAEVQN 2497
Query: 1005 MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRW 1058
+ G +S +S + L+ A+NLM +V +TV+ + AS K + G + W
Sbjct: 2498 LGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSW 2668
Query: 1059 VRKTP 1063
K P
Sbjct: 2669 KMKAP 2683
Score = 75.1 bits (183), Expect = 4e-11
Identities = 84/378 (22%), Positives = 166/378 (43%), Gaps = 9/378 (2%)
Frame = +2
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 155 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 334
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 335 --ESQFLKEELVAAVEDVRKQGDLMKAAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 508
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 509 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELK 688
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
HR + + +++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 689 DVGHRDQMAAARGILQKNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 853
Query: 244 IIRVLQLTSWDE-DAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGD----AGEQA 298
I Q T+ D+ + AL + D ++ + DP + + + E+
Sbjct: 854 ISNAAQATASDDASQHQGGGGGELAYALNNFDKQI------IVDPLSFSEERFRPSLEER 1015
Query: 299 IRQILDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQV 356
+ I+ A + + C +RRE I+ C + + + DL + G++ +++ +
Sbjct: 1016LESIISGAALMADSSCTRDDRRERIVAECNAVRK---ALQDLLSEYMGNAG-RKERSDAL 1183
Query: 357 SQGLDVLTAKVENAARKL 374
+ +D +T K + R+L
Sbjct: 1184NSAIDKMTKKTRDLRRQL 1237
>ref|NM_004389.1| Homo sapiens catenin (cadherin-associated protein), alpha 2 (CTNNA2),
mRNA
Length = 3709
Score = 154 bits (389), Expect = 5e-35
Identities = 160/644 (24%), Positives = 261/644 (39%), Gaps = 44/644 (6%)
Frame = +1
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISA-----LTSKLADLRRQGKGDSPE 458
G++ ++ AR+ EL DP RD++ + G + T+ A LR +
Sbjct: 568 GKKMVKLNYVAARRQQEL-KDPHCRDEMAAARGALKKNATMLYTASQAFLRHPDVAATRA 744
Query: 459 ARALA-KQVATALQNLQTKTNRAVANSRPAKAAVHLE-GKIEQAQRWIDNPTV-DDRGVG 515
R KQV A+ + +N A A S +A H G++ A DN + D
Sbjct: 745 NRDYVFKQVQEAIAGI---SNAAQATSPTDEAKGHTGIGELAAALNEFDNKIILDPMTFS 915
Query: 516 QAAIRGLVAEGHRLANVMMGPY------------RQDLLAKCDRVXXXXXXXXXXXXRGE 563
+A R + E RL +++ G R+ ++A+C+ V
Sbjct: 916 EARFRPSLEE--RLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMNNT 1089
Query: 564 GESPQARAL---ASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAP 620
G + L ++ +DL+ ++++A+ +SD F +T P+ +L AA +
Sbjct: 1090 GRKEKGDPLNIAIDKMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSG---- 1257
Query: 621 NREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTVEGIQASVKTARELTPQVVSAAR 680
N +EV E A F H+ V+ ++ + L PQV++AA
Sbjct: 1258 NEKEV-KEYAQVFREHANKLVEVANLACSISNNEEG-VKLVRMAATQIDSLCPQVINAAL 1431
Query: 681 ILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVA 740
L P ++ A ++ + K+QW V +T VD+ L SE I +D++KC +A
Sbjct: 1432 TLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCVIA 1611
Query: 741 MANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMD 800
+ L A +I RA R++ + E+EN E + E V A+ LS+T+ P +
Sbjct: 1612 LQEGDVDTLDRTAGAIRGRAARVIHIINAEMENYEAGVYTEKVLEATKLLSETVMPRFAE 1791
Query: 801 -----AKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLT 855
+A++ N+ P + F+D+ + V +R+A R
Sbjct: 1792 QVEVAIEALSANVPQPFEENEFIDASRLVYDGVRDIRKA--------------VLMIRTP 1929
Query: 856 DELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQ-PMMMAAR----------- 903
+EL Q A ++ Q P A+
Sbjct: 1930 EELEDDSDFEQEDYDVRRGTSVQTEDDQLIAGQSARAIMAQLPQEEKAKIAEQVEIFHQE 2109
Query: 904 --QLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASD 959
+L E KW GNDII AK+M ++M EM+ RG K +I AK IA+A
Sbjct: 2110 KSKLDAEVAKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEAGS 2289
Query: 960 EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA 1003
+ +LA+ VA QC D + +LL +RI QL I S VKA
Sbjct: 2290 RMDKLARAVADQCPDSACKQDLLAYLQRIALYCHQLNICSKVKA 2421
Score = 85.9 bits (211), Expect = 2e-14
Identities = 87/377 (23%), Positives = 159/377 (42%), Gaps = 8/377 (2%)
Frame = +1
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T T+E +LEP+ Q++ LV +G K A V A+V+ A N + G++ +
Sbjct: 91 TLTVERLLEPLVTQVTTLVNTSNKGPSGKKKGRSKKAHVLAASVEQATQNFLEKGEQIAK 270
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
++D LK ++ A V + A+ DP S R ++ +R +LS + LL
Sbjct: 271 ESQD--LKEELVAAVEDVRKQGETMRIASSEFADDPCSSVKRGTMVRAARALLSAVTRLL 444
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V +++ K + E L + +DL K G M K+ + RQQEL
Sbjct: 445 ILADMADVMRLLSHLKIVEEALEAVKNATNEQDLANRFKEFGKKMVKLNYVAARRQQELK 624
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
R + + +K+ +L +A + F+ ++ + NR++ +++ I
Sbjct: 625 DPHCRDEMAAARGALKKNATMLYTASQAFL-----RHPDVAATRANRDYVFKQVQEAIAG 789
Query: 244 IIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDP----SASPGDAGEQAI 299
I Q TS ++A + AL D+K+ + DP A + E+ +
Sbjct: 790 ISNAAQATSPTDEAKGHTGIGELAAALNEFDNKI------ILDPMTFSEARFRPSLEERL 951
Query: 300 RQILDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVS 357
I+ A + + C +RRE I+ C + Q + G +K ++
Sbjct: 952 ESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMNNTGRK----EKGDPLN 1119
Query: 358 QGLDVLTAKVENAARKL 374
+D +T K + R+L
Sbjct: 1120IAIDKMTKKTRDLRRQL 1170
>gb|M94151.2|HUMCAPR Homo sapiens cadherin-associated protein-related (CTNNA2) mRNA,
complete cds
Length = 3709
Score = 154 bits (389), Expect = 5e-35
Identities = 160/644 (24%), Positives = 261/644 (39%), Gaps = 44/644 (6%)
Frame = +1
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISA-----LTSKLADLRRQGKGDSPE 458
G++ ++ AR+ EL DP RD++ + G + T+ A LR +
Sbjct: 568 GKKMVKLNYVAARRQQEL-KDPHCRDEMAAARGALKKNATMLYTASQAFLRHPDVAATRA 744
Query: 459 ARALA-KQVATALQNLQTKTNRAVANSRPAKAAVHLE-GKIEQAQRWIDNPTV-DDRGVG 515
R KQV A+ + +N A A S +A H G++ A DN + D
Sbjct: 745 NRDYVFKQVQEAIAGI---SNAAQATSPTDEAKGHTGIGELAAALNEFDNKIILDPMTFS 915
Query: 516 QAAIRGLVAEGHRLANVMMGPY------------RQDLLAKCDRVXXXXXXXXXXXXRGE 563
+A R + E RL +++ G R+ ++A+C+ V
Sbjct: 916 EARFRPSLEE--RLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMNNT 1089
Query: 564 GESPQARAL---ASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAP 620
G + L ++ +DL+ ++++A+ +SD F +T P+ +L AA +
Sbjct: 1090 GRKEKGDPLNIAIDKMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSG---- 1257
Query: 621 NREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTVEGIQASVKTARELTPQVVSAAR 680
N +EV E A F H+ V+ ++ + L PQV++AA
Sbjct: 1258 NEKEV-KEYAQVFREHANKLVEVANLACSISNNEEG-VKLVRMAATQIDSLCPQVINAAL 1431
Query: 681 ILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVA 740
L P ++ A ++ + K+QW V +T VD+ L SE I +D++KC +A
Sbjct: 1432 TLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCVIA 1611
Query: 741 MANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMD 800
+ L A +I RA R++ + E+EN E + E V A+ LS+T+ P +
Sbjct: 1612 LQEGDVDTLDRTAGAIRGRAARVIHIINAEMENYEAGVYTEKVLEATKLLSETVMPRFAE 1791
Query: 801 -----AKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLT 855
+A++ N+ P + F+D+ + V +R+A R
Sbjct: 1792 QVEVAIEALSANVPQPFEENEFIDASRLVYDGVRDIRKA--------------VLMIRTP 1929
Query: 856 DELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQ-PMMMAAR----------- 903
+EL Q A ++ Q P A+
Sbjct: 1930 EELEDDSDFEQEDYDVRRGTSVQTEDDQLIAGQSARAIMAQLPQEEKAKIAEQVEIFHQE 2109
Query: 904 --QLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASD 959
+L E KW GNDII AK+M ++M EM+ RG K +I AK IA+A
Sbjct: 2110 KSKLDAEVAKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEAGS 2289
Query: 960 EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA 1003
+ +LA+ VA QC D + +LL +RI QL I S VKA
Sbjct: 2290 RMDKLARAVADQCPDSACKQDLLAYLQRIALYCHQLNICSKVKA 2421
Score = 85.9 bits (211), Expect = 2e-14
Identities = 87/377 (23%), Positives = 159/377 (42%), Gaps = 8/377 (2%)
Frame = +1
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T T+E +LEP+ Q++ LV +G K A V A+V+ A N + G++ +
Sbjct: 91 TLTVERLLEPLVTQVTTLVNTSNKGPSGKKKGRSKKAHVLAASVEQATQNFLEKGEQIAK 270
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
++D LK ++ A V + A+ DP S R ++ +R +LS + LL
Sbjct: 271 ESQD--LKEELVAAVEDVRKQGETMRIASSEFADDPCSSVKRGTMVRAARALLSAVTRLL 444
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V +++ K + E L + +DL K G M K+ + RQQEL
Sbjct: 445 ILADMADVMRLLSHLKIVEEALEAVKNATNEQDLANRFKEFGKKMVKLNYVAARRQQELK 624
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
R + + +K+ +L +A + F+ ++ + NR++ +++ I
Sbjct: 625 DPHCRDEMAAARGALKKNATMLYTASQAFL-----RHPDVAATRANRDYVFKQVQEAIAG 789
Query: 244 IIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDP----SASPGDAGEQAI 299
I Q TS ++A + AL D+K+ + DP A + E+ +
Sbjct: 790 ISNAAQATSPTDEAKGHTGIGELAAALNEFDNKI------ILDPMTFSEARFRPSLEERL 951
Query: 300 RQILDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVS 357
I+ A + + C +RRE I+ C + Q + G +K ++
Sbjct: 952 ESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMNNTGRK----EKGDPLN 1119
Query: 358 QGLDVLTAKVENAARKL 374
+D +T K + R+L
Sbjct: 1120IAIDKMTKKTRDLRRQL 1170
>gb|U47624.1|XLU47624 Xenopus laevis alpha(E)-catenin mRNA, complete cds
Length = 3853
Score = 154 bits (389), Expect = 5e-35
Identities = 154/632 (24%), Positives = 249/632 (39%), Gaps = 32/632 (5%)
Frame = +3
Query: 464 KQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPT-VDDRGVGQAAIRGL 522
KQ+ A+ + +N A A S A G++ A D VD G + R
Sbjct: 828 KQLQQAVSGI---SNAAQATSSEESAQQQGGGELAVALNNFDKQIIVDPLGFSEERFRPS 998
Query: 523 VAEGHRLANVMMGPY------------RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQAR 570
+ E RL +++ G R+ ++A+C+ V G +
Sbjct: 999 LEE--RLESIISGAALMADSSCTRDDRRERIVAECNSVRQALQDLLSEYMGNTGRKERGD 1172
Query: 571 ALASQLQD---SLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFD 627
AL S + +DL+ ++++A+ VSD F +T P+ +L AA N +EV
Sbjct: 1173 ALNSAIDKMTRKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNG----NEKEV-K 1337
Query: 628 ERAANFENHSXXXXXXXXXXXXXXXXXXSTVEGIQASVKTARELTPQVVSAARILLRNPG 687
E A F H+ V+ ++ S L PQV++AA L P
Sbjct: 1338 EYAQVFREHANKLIEVANLACSISNNEEG-VKLVRISAGQLESLCPQVINAALALAAKPN 1514
Query: 688 NQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQ 747
++ A E+ + K QW V +T VD+ L SE I +D++KC +A+
Sbjct: 1515 SKMAQENMDLYKEQWERQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQERDVD 1694
Query: 748 MLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMD-----AK 802
L A +I RA R++ V E++N E + E V A+ L+ T+ P + +
Sbjct: 1695 GLDRTAGAIRGRAARVIHVVTSEMDNYEPGIYTEKVLEATKLLTNTVMPRFTEQVEAAVE 1874
Query: 803 AVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXX 862
A++G+ + + F+D+ + V +R+A
Sbjct: 1875 ALSGDTNQTMDENEFIDASRLVYDGVRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSV 2054
Query: 863 XXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMMAARQLHDEARKWSSKGNDIIAA 922
K E + +L E KW GND+I
Sbjct: 2055 QTEDDQLIAGQSARAIMAQLPQEQKAKIAEQV-ASFQEEKSKLDAEVSKWDDNGNDLIVL 2231
Query: 923 AKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTN 980
AK+M ++M EM+ RG K +I AK IA+A + +L + +A C D + +
Sbjct: 2232 AKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSTCKQD 2411
Query: 981 LLQVCERIPTISTQLKILSTVKA---TMLGRTNISDEESEQATEMLVHNAQNLMQSVKET 1037
LL +RI QL I S VKA + G +S +S + L+ A+NLM +V +T
Sbjct: 2412 LLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMS---LIQAAKNLMNAVVQT 2582
Query: 1038 VREAEAASIKIRTDAGF------TLRWVRKTP 1063
V+ + AS K + G + W K P
Sbjct: 2583 VKASYVASTKYQKSQGMASLNLPAVSWKMKAP 2678
Score = 79.3 bits (194), Expect = 2e-12
Identities = 85/373 (22%), Positives = 165/373 (43%), Gaps = 4/373 (1%)
Frame = +3
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV +G + K A V A+V+ A N + G + +
Sbjct: 156 TLAVERLLEPLVSQVTTLVNTSNKGPSNKKKGRSKKAHVLAASVEQATQNFLDKGDKIAK 335
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
+ Q LK ++ A V ++ A+ DP S R ++ +R +LS + LL
Sbjct: 336 --DSQFLKEELIAAVEDVRKQGEQMRSASGEFADDPCSSVKRGNMVRAARALLSAVTRLL 509
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V +++ K + E + T +DL K L + K+ M +RQQEL
Sbjct: 510 ILADMADVYRLLVQLKVVEEGILKLRNAGTEQDLGIQYKALRAEVDKLNVMTAKRQQELK 689
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
HR + + +++ +P+L +A + + ++ + NR+ +++ ++
Sbjct: 690 DIGHRDQMAAARGILQKSIPILYTASQACL-----QHPDVAAYKANRDLVYKQLQQAVSG 854
Query: 244 IIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIRQIL 303
I Q TS +E A E + AL + D ++ + P + E+ + I+
Sbjct: 855 ISNAAQATSSEESAQQQGGGE-LAVALNNFDKQIIVDPLGFSEERFRP--SLEERLESII 1025
Query: 304 DEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLD 361
A + + C +RRE I+ C + Q + DL + G++ ++ ++ +D
Sbjct: 1026SGAALMADSSCTRDDRRERIVAECNSVRQ---ALQDLLSEYMGNTG-RKERGDALNSAID 1193
Query: 362 VLTAKVENAARKL 374
+T K + R+L
Sbjct: 1194KMTRKTRDLRRQL 1232
>ref|NM_009819.1| Mus musculus catenin alpha 2 (Catna2), mRNA
Length = 3955
Score = 153 bits (387), Expect = 8e-35
Identities = 160/644 (24%), Positives = 261/644 (39%), Gaps = 44/644 (6%)
Frame = +3
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISA-----LTSKLADLRRQGKGDSPE 458
G+E ++ AR+ EL DP RD++ + G + T+ A LR +
Sbjct: 720 GKEMVKLNYVAARRQQEL-KDPHCRDEMAAARGALKKNATMLYTASQAFLRHPDVAATRA 896
Query: 459 ARALA-KQVATALQNLQTKTNRAVANSRPAKAAVHLE-GKIEQAQRWIDNPTV-DDRGVG 515
R KQV A+ + ++ A A S +A H G++ A DN + D
Sbjct: 897 NRDYVFKQVQEAIAGI---SSAAQATSPTDEAKGHTGIGELAAALNEFDNKIILDPMTFS 1067
Query: 516 QAAIRGLVAEGHRLANVMMGPY------------RQDLLAKCDRVXXXXXXXXXXXXRGE 563
+A R + E RL +++ G R+ ++A+C+ V
Sbjct: 1068 EARFRPSLEE--RLESIISGAALMADSSCTRDDRRERMVAECNAVRQALQDLLSEDMNNT 1241
Query: 564 GESPQARAL---ASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAP 620
G + L ++ +DL+ ++++A+ +SD F +T P+ +L AA +
Sbjct: 1242 GRKEKGDPLNIAIDKMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSG---- 1409
Query: 621 NREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTVEGIQASVKTARELTPQVVSAAR 680
N +EV E A F H+ V+ ++ + L PQV++AA
Sbjct: 1410 NEKEV-KEYAQVFREHANKLVEVANLACSISNNEEG-VKLVRMAATQIDSLCPQVINAAL 1583
Query: 681 ILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVA 740
L P ++ A ++ + K+QW V +T VD+ L SE I +D++KC +A
Sbjct: 1584 TLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCVIA 1763
Query: 741 MANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMD 800
+ L A +I RA R++ + E+EN E + E V A+ LS+T+ P +
Sbjct: 1764 LQEGDVDTLDRTAGAIRGRAARVIHIINAEMENYEAGVYTEKVLEATKLLSETVMPRFAE 1943
Query: 801 -----AKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLT 855
+A++ N+ P + F+D+ + V +R+A R
Sbjct: 1944 QVEVAIEALSANVPQPFEENEFIDASRLVYYGVRDIRKA--------------VLMIRTP 2081
Query: 856 DELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQ-PMMMAAR----------- 903
+EL Q A ++ Q P A+
Sbjct: 2082 EELEDDSDFEQEDYDVRSRTSVQTEDRQLIAGQSARAIMAQLPQEEKAKIAEQVEIFHQE 2261
Query: 904 --QLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASD 959
+L E KW GNDII AK+M ++M EM+ RG K +I AK IA+A
Sbjct: 2262 KSKLDAEVAKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEAGS 2441
Query: 960 EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA 1003
+ +LA+ VA QC D + +LL +RI QL I S VKA
Sbjct: 2442 RMDKLARAVADQCPDSACKQDLLAYLQRIALYCHQLNICSKVKA 2573
Score = 82.8 bits (203), Expect = 2e-13
Identities = 86/377 (22%), Positives = 158/377 (41%), Gaps = 8/377 (2%)
Frame = +3
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T T+E +LEP+ Q++ LV +G K A V A+V+ A N + G++ +
Sbjct: 243 TLTVERLLEPLVTQVTTLVNTSNKGPSGKKKGRSKKAHVLAASVEQATQNFLEKGEQIAK 422
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
++D LK ++ A V A+ DP S R ++ +R +LS + LL
Sbjct: 423 ESQD--LKEELVAAVEDVRKQGETKRIASSEFADDPCSSVKRGTMVRAARALLSAVTRLL 596
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V +++ K + E L + +DL K G M K+ + RQQEL
Sbjct: 597 ILADMADVMRLLSHLKIVEEALEAVKNATNEQDLANRFKEFGKEMVKLNYVAARRQQELK 776
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
R + + +K+ +L +A + F+ ++ + NR++ +++ I
Sbjct: 777 DPHCRDEMAAARGALKKNATMLYTASQAFL-----RHPDVAATRANRDYVFKQVQEAIAG 941
Query: 244 IIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDP----SASPGDAGEQAI 299
I Q TS ++A + AL D+K+ + DP A + E+ +
Sbjct: 942 ISSAAQATSPTDEAKGHTGIGELAAALNEFDNKI------ILDPMTFSEARFRPSLEERL 1103
Query: 300 RQILDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVS 357
I+ A + + C +RRE ++ C + Q + G +K ++
Sbjct: 1104ESIISGAALMADSSCTRDDRRERMVAECNAVRQALQDLLSEDMNNTGRK----EKGDPLN 1271
Query: 358 QGLDVLTAKVENAARKL 374
+D +T K + R+L
Sbjct: 1272IAIDKMTKKTRDLRRQL 1322
>dbj|D25282.1|MUSANCII Mouse mRNA for alpha N-catenin II, complete cds
Length = 3955
Score = 153 bits (387), Expect = 8e-35
Identities = 160/644 (24%), Positives = 261/644 (39%), Gaps = 44/644 (6%)
Frame = +3
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISA-----LTSKLADLRRQGKGDSPE 458
G+E ++ AR+ EL DP RD++ + G + T+ A LR +
Sbjct: 720 GKEMVKLNYVAARRQQEL-KDPHCRDEMAAARGALKKNATMLYTASQAFLRHPDVAATRA 896
Query: 459 ARALA-KQVATALQNLQTKTNRAVANSRPAKAAVHLE-GKIEQAQRWIDNPTV-DDRGVG 515
R KQV A+ + ++ A A S +A H G++ A DN + D
Sbjct: 897 NRDYVFKQVQEAIAGI---SSAAQATSPTDEAKGHTGIGELAAALNEFDNKIILDPMTFS 1067
Query: 516 QAAIRGLVAEGHRLANVMMGPY------------RQDLLAKCDRVXXXXXXXXXXXXRGE 563
+A R + E RL +++ G R+ ++A+C+ V
Sbjct: 1068 EARFRPSLEE--RLESIISGAALMADSSCTRDDRRERMVAECNAVRQALQDLLSEDMNNT 1241
Query: 564 GESPQARAL---ASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAP 620
G + L ++ +DL+ ++++A+ +SD F +T P+ +L AA +
Sbjct: 1242 GRKEKGDPLNIAIDKMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSG---- 1409
Query: 621 NREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTVEGIQASVKTARELTPQVVSAAR 680
N +EV E A F H+ V+ ++ + L PQV++AA
Sbjct: 1410 NEKEV-KEYAQVFREHANKLVEVANLACSISNNEEG-VKLVRMAATQIDSLCPQVINAAL 1583
Query: 681 ILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVA 740
L P ++ A ++ + K+QW V +T VD+ L SE I +D++KC +A
Sbjct: 1584 TLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCVIA 1763
Query: 741 MANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMD 800
+ L A +I RA R++ + E+EN E + E V A+ LS+T+ P +
Sbjct: 1764 LQEGDVDTLDRTAGAIRGRAARVIHIINAEMENYEAGVYTEKVLEATKLLSETVMPRFAE 1943
Query: 801 -----AKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLT 855
+A++ N+ P + F+D+ + V +R+A R
Sbjct: 1944 QVEVAIEALSANVPQPFEENEFIDASRLVYYGVRDIRKA--------------VLMIRTP 2081
Query: 856 DELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQ-PMMMAAR----------- 903
+EL Q A ++ Q P A+
Sbjct: 2082 EELEDDSDFEQEDYDVRSRTSVQTEDRQLIAGQSARAIMAQLPQEEKAKIAEQVEIFHQE 2261
Query: 904 --QLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASD 959
+L E KW GNDII AK+M ++M EM+ RG K +I AK IA+A
Sbjct: 2262 KSKLDAEVAKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEAGS 2441
Query: 960 EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA 1003
+ +LA+ VA QC D + +LL +RI QL I S VKA
Sbjct: 2442 RMDKLARAVADQCPDSACKQDLLAYLQRIALYCHQLNICSKVKA 2573
Score = 82.8 bits (203), Expect = 2e-13
Identities = 86/377 (22%), Positives = 158/377 (41%), Gaps = 8/377 (2%)
Frame = +3
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T T+E +LEP+ Q++ LV +G K A V A+V+ A N + G++ +
Sbjct: 243 TLTVERLLEPLVTQVTTLVNTSNKGPSGKKKGRSKKAHVLAASVEQATQNFLEKGEQIAK 422
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
++D LK ++ A V A+ DP S R ++ +R +LS + LL
Sbjct: 423 ESQD--LKEELVAAVEDVRKQGETKRIASSEFADDPCSSVKRGTMVRAARALLSAVTRLL 596
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V +++ K + E L + +DL K G M K+ + RQQEL
Sbjct: 597 ILADMADVMRLLSHLKIVEEALEAVKNATNEQDLANRFKEFGKEMVKLNYVAARRQQELK 776
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
R + + +K+ +L +A + F+ ++ + NR++ +++ I
Sbjct: 777 DPHCRDEMAAARGALKKNATMLYTASQAFL-----RHPDVAATRANRDYVFKQVQEAIAG 941
Query: 244 IIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDP----SASPGDAGEQAI 299
I Q TS ++A + AL D+K+ + DP A + E+ +
Sbjct: 942 ISSAAQATSPTDEAKGHTGIGELAAALNEFDNKI------ILDPMTFSEARFRPSLEERL 1103
Query: 300 RQILDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVS 357
I+ A + + C +RRE ++ C + Q + G +K ++
Sbjct: 1104ESIISGAALMADSSCTRDDRRERMVAECNAVRQALQDLLSEDMNNTGRK----EKGDPLN 1271
Query: 358 QGLDVLTAKVENAARKL 374
+D +T K + R+L
Sbjct: 1272IAIDKMTKKTRDLRRQL 1322
>gb|AF099737.1|AF099737 Danio rerio cell-adhesion protein alphaE catenin mRNA, complete cds
Length = 3777
Score = 153 bits (386), Expect = 1e-34
Identities = 135/545 (24%), Positives = 219/545 (39%), Gaps = 19/545 (3%)
Frame = +3
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKARMQEAMTQE 594
R+ ++A+C+ V G ++ AL + + K DL+ ++++A+
Sbjct: 1272 RERIVAECNSVRQALQDLLSEYMGNAGRKEKSDALNTAIDRMTKKTRDLRRQLRKAVMDH 1451
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXX 654
VSD F +T P+ +L AA N +EV E A F H+
Sbjct: 1452 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISNNE 1616
Query: 655 XSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
V+ ++ + L PQV++AA L P ++ A ++ + K+QW V +T VD
Sbjct: 1617 EG-VKLVRMAASQLETLCPQVINAALALAAKPNSKVAQDNMDLFKDQWEKQVRVLTDAVD 1793
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1794 DITSIDDFLCVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVVHVVTSEMDNY 1973
Query: 775 EDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVA 829
+ E V A+ L++T+ P + +A++ N P + F+D+ + V
Sbjct: 1974 MPGVYTEKVLEATKLLTETVMPRFTEQVEAAVEALSANNGQPVDENEFIDASRLVYDGVR 2153
Query: 830 KVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 889
+R+A K
Sbjct: 2154 DIRKAVLMIRTPEELDDSDFETEDFDSRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAK 2333
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--L 947
E + +L E KW GNDII AK+M ++M EM+ RG K +
Sbjct: 2334 IAEQV-ASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDV 2510
Query: 948 IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---T 1004
I AK IA+A + +L + +A QC D + +LL +RI QL I S VKA
Sbjct: 2511 ISAAKKIAEAGSRMDKLGRAIADQCPDSACKQDLLAYLQRIALFCHQLNICSKVKAEVQN 2690
Query: 1005 MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRW 1058
+ G +S +S + L+ A+NLM SV TV+ + AS K + + W
Sbjct: 2691 LGGELVVSGLDSAMS---LIQAAKNLMNSVVSTVKASYVASTKYQKSQDMQSLNMPAISW 2861
Query: 1059 VRKTP 1063
K P
Sbjct: 2862 KMKAP 2876
>ref|NM_001903.1| Homo sapiens catenin (cadherin-associated protein), alpha 1 (102kD)
(CTNNA1), mRNA
Length = 3454
Score = 147 bits (370), Expect = 8e-33
Identities = 135/536 (25%), Positives = 223/536 (41%), Gaps = 20/536 (3%)
Frame = +2
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKARMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ ++++A+
Sbjct: 992 RERIVAECNAVRQACRTCVSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1171
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXX 654
VSD F +T P+ +L AA N +EV E A F H+
Sbjct: 1172 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSIS--- 1327
Query: 655 XSTVEGIQASVKTARELT---PQVVSAAR-ILLRNPGNQAAYEHFETMKNQWIDNVEKMT 710
+ EG++ +A +L PQV++AA L P ++ A E+ + K QW V +T
Sbjct: 1328 -NNEEGVKLVRMSASQLEAGCPQVINAATWALAPKPQSKLAQENMDLFKEQWEKQVRVLT 1504
Query: 711 GLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKRE 770
VD+ L SE I +D++KC +A+ L A +I RA R++ V E
Sbjct: 1505 DAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSE 1684
Query: 771 VENSEDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRIL 825
++N E + E V A+ LS T+ P + +A++ + + P + F+D+ +
Sbjct: 1685 MDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVY 1864
Query: 826 GAVAKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXX 885
+ +R+A T++
Sbjct: 1865 DGIRDIRKAVLMIRTPEELDDSDFE----TEDFDVRSETSVQTEDDQLIAGQSARAIMAQ 2032
Query: 886 XXQKAGEVINQPMMMAARQ---LHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSG 942
Q+ I + + + L E KW GNDII AK+M ++M EM+ RG
Sbjct: 2033 LPQEQKAKIREQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGP 2212
Query: 943 TKRA--LIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILST 1000
K +I AK IA+A + +L + + C D + +LL +RI QL I S
Sbjct: 2213 LKNTSDVISAAKKIAEAGSRMDKLGRTIRDHCPDSACKQDLLAYLQRIALYCHQLNICSK 2392
Query: 1001 VKA---TMLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAG 1053
VKA + G +S +S + L+ A+NLM +V +TV+ + AS K + G
Sbjct: 2393 VKAEVQNLGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQG 2551
Score = 73.2 bits (178), Expect = 1e-10
Identities = 83/378 (21%), Positives = 159/378 (41%), Gaps = 9/378 (2%)
Frame = +2
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 68 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 247
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 248 --ESQFLKEELVVAVEDVRKQGDLMKAAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 421
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 422 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGNQYKALKPEVDKLNIMAAKRQQELK 601
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
HR + + ++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 602 DVGHRDQMAAARGILQSNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 766
Query: 244 IIRVLQLTSWDE-DAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGD----AGEQA 298
I Q T+ D+ + AL + D ++ + DP + + + E+
Sbjct: 767 ISNAAQATASDDASQHQGGGGGELAYALNNFDKQI------IVDPLSFSEERFRPSLEER 928
Query: 299 IRQILDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQV 356
+ I+ A + + C +RRE I+ C + Q G +++ +
Sbjct: 929 LESIISGAALMADSSCTRDDRRERIVAECNAVRQACRTCVSEYMGNAGRK----ERSDAL 1096
Query: 357 SQGLDVLTAKVENAARKL 374
+ +D +T K + R+L
Sbjct: 1097NSAIDKMTKKTRDLRRQL 1150
>gb|L23805.1|HUMCATENIN Human alpha1(E)-catenin mRNA, complete cds
Length = 3454
Score = 147 bits (370), Expect = 8e-33
Identities = 135/536 (25%), Positives = 223/536 (41%), Gaps = 20/536 (3%)
Frame = +2
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKARMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ ++++A+
Sbjct: 992 RERIVAECNAVRQACRTCVSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1171
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXX 654
VSD F +T P+ +L AA N +EV E A F H+
Sbjct: 1172 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSIS--- 1327
Query: 655 XSTVEGIQASVKTARELT---PQVVSAAR-ILLRNPGNQAAYEHFETMKNQWIDNVEKMT 710
+ EG++ +A +L PQV++AA L P ++ A E+ + K QW V +T
Sbjct: 1328 -NNEEGVKLVRMSASQLEAGCPQVINAATWALAPKPQSKLAQENMDLFKEQWEKQVRVLT 1504
Query: 711 GLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKRE 770
VD+ L SE I +D++KC +A+ L A +I RA R++ V E
Sbjct: 1505 DAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSE 1684
Query: 771 VENSEDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRIL 825
++N E + E V A+ LS T+ P + +A++ + + P + F+D+ +
Sbjct: 1685 MDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVY 1864
Query: 826 GAVAKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXX 885
+ +R+A T++
Sbjct: 1865 DGIRDIRKAVLMIRTPEELDDSDFE----TEDFDVRSETSVQTEDDQLIAGQSARAIMAQ 2032
Query: 886 XXQKAGEVINQPMMMAARQ---LHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSG 942
Q+ I + + + L E KW GNDII AK+M ++M EM+ RG
Sbjct: 2033 LPQEQKAKIREQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGP 2212
Query: 943 TKRA--LIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILST 1000
K +I AK IA+A + +L + + C D + +LL +RI QL I S
Sbjct: 2213 LKNTSDVISAAKKIAEAGSRMDKLGRTIRDHCPDSACKQDLLAYLQRIALYCHQLNICSK 2392
Query: 1001 VKA---TMLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAG 1053
VKA + G +S +S + L+ A+NLM +V +TV+ + AS K + G
Sbjct: 2393 VKAEVQNLGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQG 2551
Score = 73.2 bits (178), Expect = 1e-10
Identities = 83/378 (21%), Positives = 159/378 (41%), Gaps = 9/378 (2%)
Frame = +2
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 68 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 247
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 248 --ESQFLKEELVVAVEDVRKQGDLMKAAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 421
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 422 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGNQYKALKPEVDKLNIMAAKRQQELK 601
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
HR + + ++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 602 DVGHRDQMAAARGILQSNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 766
Query: 244 IIRVLQLTSWDE-DAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGD----AGEQA 298
I Q T+ D+ + AL + D ++ + DP + + + E+
Sbjct: 767 ISNAAQATASDDASQHQGGGGGELAYALNNFDKQI------IVDPLSFSEERFRPSLEER 928
Query: 299 IRQILDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQV 356
+ I+ A + + C +RRE I+ C + Q G +++ +
Sbjct: 929 LESIISGAALMADSSCTRDDRRERIVAECNAVRQACRTCVSEYMGNAGRK----ERSDAL 1096
Query: 357 SQGLDVLTAKVENAARKL 374
+ +D +T K + R+L
Sbjct: 1097NSAIDKMTKKTRDLRRQL 1150
>ref|XM_010873.4| Homo sapiens catenin (cadherin-associated protein), alpha 2 (CTNNA2),
mRNA
Length = 2829
Score = 145 bits (365), Expect = 3e-32
Identities = 118/444 (26%), Positives = 188/444 (41%), Gaps = 21/444 (4%)
Frame = +3
Query: 581 KDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXX 640
+DL+ ++++A+ +SD F +T P+ +L AA + N +EV E A F H+
Sbjct: 270 RDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSG----NEKEV-KEYAQVFREHANKL 434
Query: 641 XXXXXXXXXXXXXXXSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKN 700
V+ ++ + L PQV++AA L P ++ A ++ + K+
Sbjct: 435 VEVANLACSISNNEEG-VKLVRMAATQIDSLCPQVINAALTLAARPQSKVAQDNMDVFKD 611
Query: 701 QWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRA 760
QW V +T VD+ L SE I +D++KC +A+ L A +I RA
Sbjct: 612 QWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCVIALQEGDVDTLDRTAGAIRGRA 791
Query: 761 NRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQK 815
R++ + E+EN E + E V A+ LS+T+ P + +A++ N+ P +
Sbjct: 792 ARVIHIINAEMENYEAGVYTEKVLEATKLLSETVMPRFAEQVEVAIEALSANVPQPFEEN 971
Query: 816 SFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXX 875
F+D+ + V +R+A R +EL
Sbjct: 972 EFIDASRLVYDGVRDIRKA--------------VLMIRTPEELEDDSDFEQEDYDVRSRT 1109
Query: 876 XXXXXXXXXXXXQKAGEVINQ-PMMMAAR-------------QLHDEARKWSSKGNDIIA 921
Q A ++ Q P A+ +L E KW GNDII
Sbjct: 1110 SVQTEDDQLIAGQSARAIMAQLPQEEKAKIAEQVEIFHQEKSKLDAEVAKWDDSGNDIIV 1289
Query: 922 AAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRT 979
AK+M ++M EM+ RG K +I AK IA+A + +LA+ VA QC D +
Sbjct: 1290 LAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEAGSRMDKLARAVADQCPDSACKQ 1469
Query: 980 NLLQVCERIPTISTQLKILSTVKA 1003
+LL +RI QL I S VKA
Sbjct: 1470 DLLAYLQRIALYCHQLNICSKVKA 1541
>ref|NM_079495.1| Drosophila melanogaster alpha Catenin (alpha-Cat), mRNA
Length = 2935
Score = 143 bits (361), Expect = 8e-32
Identities = 135/532 (25%), Positives = 221/532 (41%), Gaps = 22/532 (4%)
Frame = +3
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGE---SPQARALASQLQDSLKDLKARMQEAMTQE 594
R+ ++A+C+ V + SP Q+ +DL+ ++++A+
Sbjct: 1014 RERIVAECNAVRQALQDLLSEYMSNMSQKDNSPGLSRAIDQMCRKTRDLRRQLRKAVVDH 1193
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXX 654
VSD F +TTTP+ L AA + E+ E++ F H+
Sbjct: 1194 VSDSFLETTTPLLDLIEAAKS-----GNEKKVREKSEIFTKHAEKLVEVANLVCSMSNNE 1358
Query: 655 XSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
V+ ++ + L PQV++AA IL P ++ A E+ T + W V +T VD
Sbjct: 1359 DG-VKMVRYAAAQIESLCPQVINAASILTVRPNSKVAQENMTTYRQAWEVQVRILTEAVD 1535
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ + L A A +I R++R+ V + E++N
Sbjct: 1536 DITTIDDFLAVSENHILEDVNKCVMALQVGDARDLRATAGAIQGRSSRVCNVVEAEMDNY 1715
Query: 775 E----DPKFREAVKAASDELSKTISPMVMDAKAVAGNISDPGL-QKSFLDSGYRILGAVA 829
E + EAVK D++ V A N S+ + + F+D+ + V
Sbjct: 1716 EPCIYTKRVLEAVKVLRDQVMMKFDQRVGAAVGALSNNSNKDVDENDFIDASRLVYDGVR 1895
Query: 830 KVREAXXXXXXXXXXXXXXXX--XXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 887
++R A LT E
Sbjct: 1896 EIRRAVLMNRSSEDLDTDTEFEPVEDLTLETRSRSSAHTGDQTVDEYPDISGICTAREAM 2075
Query: 888 QKAGE----VINQPMMMAARQ---LHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGG 940
+K E I Q + + R+ E KW GNDII AK M ++M EM+ RG
Sbjct: 2076 RKMTEEDKQKIAQQVELFRREKLTFDSEVAKWDDTGNDIIFLAKHMCMIMMEMTDFTRGR 2255
Query: 941 SGTKRAL--IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKIL 998
K + I AK I++A ++ +L +E+A+QC + + +LL +RI Q++I
Sbjct: 2256 GPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKKDLLAYLQRIALYCHQIQIT 2435
Query: 999 STVKATMLGRTNISDE---ESEQATEMLVHNAQNLMQSVKETVREAEAASIK 1047
S VKA + NIS E + L+ A+NLM +V TV+ + AS K
Sbjct: 2436 SKVKADV---QNISGELIVSGLDSATSLIQAAKNLMNAVVLTVKYSYVASTK 2582
>dbj|D13964.2|DROALPC Drosophila melanogaster mRNA for alpha-catenin, complete cds
Length = 2935
Score = 143 bits (361), Expect = 8e-32
Identities = 135/532 (25%), Positives = 221/532 (41%), Gaps = 22/532 (4%)
Frame = +3
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGE---SPQARALASQLQDSLKDLKARMQEAMTQE 594
R+ ++A+C+ V + SP Q+ +DL+ ++++A+
Sbjct: 1014 RERIVAECNAVRQALQDLLSEYMSNMSQKDNSPGLSRAIDQMCRKTRDLRRQLRKAVVDH 1193
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXX 654
VSD F +TTTP+ L AA + E+ E++ F H+
Sbjct: 1194 VSDSFLETTTPLLDLIEAAKS-----GNEKKVREKSEIFTKHAEKLVEVANLVCSMSNNE 1358
Query: 655 XSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
V+ ++ + L PQV++AA IL P ++ A E+ T + W V +T VD
Sbjct: 1359 DG-VKMVRYAAAQIESLCPQVINAASILTVRPNSKVAQENMTTYRQAWEVQVRILTEAVD 1535
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ + L A A +I R++R+ V + E++N
Sbjct: 1536 DITTIDDFLAVSENHILEDVNKCVMALQVGDARDLRATAGAIQGRSSRVCNVVEAEMDNY 1715
Query: 775 E----DPKFREAVKAASDELSKTISPMVMDAKAVAGNISDPGL-QKSFLDSGYRILGAVA 829
E + EAVK D++ V A N S+ + + F+D+ + V
Sbjct: 1716 EPCIYTKRVLEAVKVLRDQVMMKFDQRVGAAVGALSNNSNKDVDENDFIDASRLVYDGVR 1895
Query: 830 KVREAXXXXXXXXXXXXXXXX--XXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 887
++R A LT E
Sbjct: 1896 EIRRAVLMNRSSEDLDTDTEFEPVEDLTLETRSRSSAHTGDQTVDEYPDISGICTAREAM 2075
Query: 888 QKAGE----VINQPMMMAARQ---LHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGG 940
+K E I Q + + R+ E KW GNDII AK M ++M EM+ RG
Sbjct: 2076 RKMTEEDKQKIAQQVELFRREKLTFDSEVAKWDDTGNDIIFLAKHMCMIMMEMTDFTRGR 2255
Query: 941 SGTKRAL--IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKIL 998
K + I AK I++A ++ +L +E+A+QC + + +LL +RI Q++I
Sbjct: 2256 GPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKKDLLAYLQRIALYCHQIQIT 2435
Query: 999 STVKATMLGRTNISDE---ESEQATEMLVHNAQNLMQSVKETVREAEAASIK 1047
S VKA + NIS E + L+ A+NLM +V TV+ + AS K
Sbjct: 2436 SKVKADV---QNISGELIVSGLDSATSLIQAAKNLMNAVVLTVKYSYVASTK 2582
>ref|NM_013266.1| Homo sapiens alpha-catenin-like protein (VR22), mRNA
Length = 3024
Score = 143 bits (360), Expect = 1e-31
Identities = 155/671 (23%), Positives = 260/671 (38%), Gaps = 24/671 (3%)
Frame = +2
Query: 402 PEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARA 461
P ++I GA A KE +L S+ S +A L+ E +
Sbjct: 767 PNQRDEIAGARASL----------KENSPLLHSICSACLEHSDVASLKASKDTVCEEIQN 916
Query: 462 LAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWID-NP-TVDDRGVGQAAI 519
++ A Q +Q T + P A L +++ + I NP TV + + +
Sbjct: 917 ALNVISNASQGIQNMT------TPPEPQAATLGSALDELENLIVLNPLTVTEEEIRPSLE 1078
Query: 520 RGLVA--EGHRL---ANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALAS 574
+ L A G L ++ +R+ ++A+C+ + G+ ++ L
Sbjct: 1079 KRLEAIISGAALLADSSCTRDLHRERIIAECNAIRQALQDLLSEYMNNAGKKERSNTLNI 1258
Query: 575 QLQDSLK---DLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAA 631
L + K DL+ ++++A+ VSD F DTT P+ +L AA RE+ E AA
Sbjct: 1259 ALDNMCKKTRDLRRQLRKAIIDHVSDSFLDTTVPLLVLIEAA-----KNGREKEIKEYAA 1423
Query: 632 NFENHSXXXXXXXXXXXXXXXXXXSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAA 691
F H+ ++ ++ + L PQ+++AA L P +QA
Sbjct: 1424 IFHEHTSRLVEVANLACSMSTNEDG-IKIVKIAANHLETLCPQIINAALALAARPKSQAV 1600
Query: 692 YEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVA 751
E K W +++ +T VD+ L SE I +D++KC +A+ + L
Sbjct: 1601 KNTMEMYKRTWENHIHVLTEAVDDITSIDDFLAVSESHILEDVNKCIIALRDQDADNLDR 1780
Query: 752 GATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISP-MVMDAKAVAGNISD 810
A +I RA R+ + E+++ E + E V + L+ T+ P V +S
Sbjct: 1781 AAGAIRGRAARVAHIVTGEMDSYEPGAYTEGVMRNVNFLTSTVIPEFVTQVNVALEALSK 1960
Query: 811 PGL----QKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXX 866
L F+D +I + +R R +EL
Sbjct: 1961 SSLNVLDDNQFVDISKKIYDTIHDIR--------------CSVMMIRTPEELEDVSDLEE 2098
Query: 867 XXXXXXXXXXXXXXXXXXXXXQKAGEVINQPM-------MMAARQLHDEARKWSSKGNDI 919
+ E + + +L E W NDI
Sbjct: 2099 EHEVRSHTSIQTEGKTDRAKMTQLPEAEKEKIAEQVADFKKVKSKLDAEIEIWDDTSNDI 2278
Query: 920 IAAAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASDEVTRLAKEVAKQCTDKRI 977
I AK M ++M EM+ RG K +I AK I+++ + LA+++A QC D
Sbjct: 2279 IVLAKNMCMIMMEMTDFTRGKGPLKHTTDVIYAAKMISESGSRMDVLARQIANQCPDPSC 2458
Query: 978 RTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKET 1037
+ +LL E+I S QLKI S VKA + + + L+ A+NLM +V +T
Sbjct: 2459 KQDLLAYLEQIKFYSHQLKICSQVKAEIQNLGGELIMSALDSVTSLIQAAKNLMNAVVQT 2638
Query: 1038 VREAEAASIKI 1048
V+ + AS KI
Sbjct: 2639 VKMSYIASTKI 2671
Score = 60.5 bits (145), Expect = 9e-07
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 1/203 (0%)
Frame = +2
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKA-IPDLTAPVAAVQAAVSNLVRVGKETVQT 64
T T+E +LEP+ Q++ LV + K + +A+V+ A NL+ G++ Q
Sbjct: 233 TFTVEKLLEPLIIQVTTLVNCPQNPSSRKKGRSKRASVLLASVEEATWNLLDKGEKIAQ- 409
Query: 65 TEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLL 124
E +LK ++ + +V L +A+ DP +P R+ ++ +R +L+ + LL+
Sbjct: 410 -EATVLKDELTASLEEVRKESEALKVSAERFTDDPCFLPKREAVVQAARALLAAVTRLLI 586
Query: 125 TFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTH 184
D +V +++ + V DL + LG + + + +RQQ+L
Sbjct: 587 LADMIDVMCLLQHVSAFQRTFETLKNVANKSDLQKTYQKLGKELENLDYLAFKRQQDLKS 766
Query: 185 QEHRVMLVNSMNTVKELLPVLIS 207
R + + ++KE P+L S
Sbjct: 767 PNQRDEIAGARASLKENSPLLHS 835
>gb|AF091606.1|AF091606 Homo sapiens alpha-catenin-like protein VR22 mRNA, complete cds
Length = 3024
Score = 143 bits (360), Expect = 1e-31
Identities = 155/671 (23%), Positives = 260/671 (38%), Gaps = 24/671 (3%)
Frame = +2
Query: 402 PEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARA 461
P ++I GA A KE +L S+ S +A L+ E +
Sbjct: 767 PNQRDEIAGARASL----------KENSPLLHSICSACLEHSDVASLKASKDTVCEEIQN 916
Query: 462 LAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWID-NP-TVDDRGVGQAAI 519
++ A Q +Q T + P A L +++ + I NP TV + + +
Sbjct: 917 ALNVISNASQGIQNMT------TPPEPQAATLGSALDELENLIVLNPLTVTEEEIRPSLE 1078
Query: 520 RGLVA--EGHRL---ANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALAS 574
+ L A G L ++ +R+ ++A+C+ + G+ ++ L
Sbjct: 1079 KRLEAIISGAALLADSSCTRDLHRERIIAECNAIRQALQDLLSEYMNNAGKKERSNTLNI 1258
Query: 575 QLQDSLK---DLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAA 631
L + K DL+ ++++A+ VSD F DTT P+ +L AA RE+ E AA
Sbjct: 1259 ALDNMCKKTRDLRRQLRKAIIDHVSDSFLDTTVPLLVLIEAA-----KNGREKEIKEYAA 1423
Query: 632 NFENHSXXXXXXXXXXXXXXXXXXSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAA 691
F H+ ++ ++ + L PQ+++AA L P +QA
Sbjct: 1424 IFHEHTSRLVEVANLACSMSTNEDG-IKIVKIAANHLETLCPQIINAALALAARPKSQAV 1600
Query: 692 YEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVA 751
E K W +++ +T VD+ L SE I +D++KC +A+ + L
Sbjct: 1601 KNTMEMYKRTWENHIHVLTEAVDDITSIDDFLAVSESHILEDVNKCIIALRDQDADNLDR 1780
Query: 752 GATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISP-MVMDAKAVAGNISD 810
A +I RA R+ + E+++ E + E V + L+ T+ P V +S
Sbjct: 1781 AAGAIRGRAARVAHIVTGEMDSYEPGAYTEGVMRNVNFLTSTVIPEFVTQVNVALEALSK 1960
Query: 811 PGL----QKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXX 866
L F+D +I + +R R +EL
Sbjct: 1961 SSLNVLDDNQFVDISKKIYDTIHDIR--------------CSVMMIRTPEELEDVSDLEE 2098
Query: 867 XXXXXXXXXXXXXXXXXXXXXQKAGEVINQPM-------MMAARQLHDEARKWSSKGNDI 919
+ E + + +L E W NDI
Sbjct: 2099 EHEVRSHTSIQTEGKTDRAKMTQLPEAEKEKIAEQVADFKKVKSKLDAEIEIWDDTSNDI 2278
Query: 920 IAAAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASDEVTRLAKEVAKQCTDKRI 977
I AK M ++M EM+ RG K +I AK I+++ + LA+++A QC D
Sbjct: 2279 IVLAKNMCMIMMEMTDFTRGKGPLKHTTDVIYAAKMISESGSRMDVLARQIANQCPDPSC 2458
Query: 978 RTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKET 1037
+ +LL E+I S QLKI S VKA + + + L+ A+NLM +V +T
Sbjct: 2459 KQDLLAYLEQIKFYSHQLKICSQVKAEIQNLGGELIMSALDSVTSLIQAAKNLMNAVVQT 2638
Query: 1038 VREAEAASIKI 1048
V+ + AS KI
Sbjct: 2639 VKMSYIASTKI 2671
Score = 60.5 bits (145), Expect = 9e-07
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 1/203 (0%)
Frame = +2
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKA-IPDLTAPVAAVQAAVSNLVRVGKETVQT 64
T T+E +LEP+ Q++ LV + K + +A+V+ A NL+ G++ Q
Sbjct: 233 TFTVEKLLEPLIIQVTTLVNCPQNPSSRKKGRSKRASVLLASVEEATWNLLDKGEKIAQ- 409
Query: 65 TEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLL 124
E +LK ++ + +V L +A+ DP +P R+ ++ +R +L+ + LL+
Sbjct: 410 -EATVLKDELTASLEEVRKESEALKVSAERFTDDPCFLPKREAVVQAARALLAAVTRLLI 586
Query: 125 TFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTH 184
D +V +++ + V DL + LG + + + +RQQ+L
Sbjct: 587 LADMIDVMCLLQHVSAFQRTFETLKNVANKSDLQKTYQKLGKELENLDYLAFKRQQDLKS 766
Query: 185 QEHRVMLVNSMNTVKELLPVLIS 207
R + + ++KE P+L S
Sbjct: 767 PNQRDEIAGARASLKENSPLLHS 835
>gb|AY051780.1| Drosophila melanogaster LD30423 full length cDNA
Length = 2998
Score = 143 bits (360), Expect = 1e-31
Identities = 134/532 (25%), Positives = 220/532 (41%), Gaps = 22/532 (4%)
Frame = +2
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGE---SPQARALASQLQDSLKDLKARMQEAMTQE 594
R+ ++A+C+ V + SP Q+ +DL+ ++++A+
Sbjct: 1031 RERIVAECNAVRQALQDLLSEYMSNMSQKDNSPGLSRAIDQMCRKTRDLRRQLRKAVVDH 1210
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXX 654
VSD F +TTTP+ L AA + E+ E++ F H+
Sbjct: 1211 VSDSFLETTTPLLDLIEAAKS-----GNEKKVREKSEIFTKHAEKLVEVANLVCSMSNNE 1375
Query: 655 XSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
V+ ++ + L PQV++AA IL P ++ A E+ T + W V +T VD
Sbjct: 1376 DG-VKMVRYAAAQIESLCPQVINAASILTVRPNSKVAQENMTTYRQAWEVQVRILTEAVD 1552
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ + L A A +I R++R+ V + E++N
Sbjct: 1553 DITTIDDFLAVSENHILEDVNKCVMALQVGDARDLRATAGAIQGRSSRVCNVVEAEMDNY 1732
Query: 775 E----DPKFREAVKAASDELSKTISPMVMDAKAVAGNISDPGL-QKSFLDSGYRILGAVA 829
E + EAVK D++ V A N S+ + + F+D+ + V
Sbjct: 1733 EPCIYTKRVLEAVKVLRDQVMMKFDQRVGAAVGALSNNSNKDVDENDFIDASRLVYDGVR 1912
Query: 830 KVREAXXXXXXXXXXXXXXXX--XXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 887
++R A LT E
Sbjct: 1913 EIRRAVLMNRSSEDLDTDTEFEPVEDLTLETRSRSSAHTGDQTVDEYPDISGICTAREAM 2092
Query: 888 QKAGE-----VINQPMMMAARQL--HDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGG 940
+K E + Q + +L E KW GNDII AK M ++M EM+ RG
Sbjct: 2093 RKMTEEDKQKIAQQVELFRREKLTSDSEVAKWDDTGNDIIFLAKHMCMIMMEMTDFTRGR 2272
Query: 941 SGTKRAL--IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKIL 998
K + I AK I++A ++ +L +E+A+QC + + +LL +RI Q++I
Sbjct: 2273 GPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKKDLLAYLQRIALYCHQIQIT 2452
Query: 999 STVKATMLGRTNISDE---ESEQATEMLVHNAQNLMQSVKETVREAEAASIK 1047
S VKA + NIS E + L+ A+NLM +V TV+ + AS K
Sbjct: 2453 SKVKADV---QNISGELIVSGLDSATSLIQAAKNLMNAVVLTVKYSYVASTK 2599
>dbj|AB041262.1|AB041262 Mus musculus mRNA for vinculin, partial cds
Length = 1992
Score = 142 bits (357), Expect = 2e-31
Identities = 77/97 (79%), Positives = 79/97 (81%)
Frame = +2
Query: 965 AKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLV 1024
AKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLV
Sbjct: 2 AKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLV 181
Query: 1025 HNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRK 1061
HN QNLMQSVKE + + LRWVRK
Sbjct: 182 HNVQNLMQSVKEMCERLNCFN-QNPNRCWLYLRWVRK 289
>gb|U40802.2| Caenorhabditis elegans cosmid ZC477, complete sequence
Length = 31787
Score = 139 bits (350), Expect = 2e-30
Identities = 93/280 (33%), Positives = 143/280 (50%), Gaps = 1/280 (0%)
Frame = -3
Query: 137 VCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMN 196
VC+G +L + T +D+ P + + ++ RQQELTHQ HR +L+ M+
Sbjct: 6294 VCEGNFLFLN*L*YIPTFQDI-------SPVLHDVTNDVNLRQQELTHQVHREILIRCMD 6136
Query: 197 TVKELLPVLISAMKIFVTTKNSK-NQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDE 255
++K + P+LI +MK + QG EA+ NRNF ++M+ E+NEIIRVLQLT++DE
Sbjct: 6135 SIKVIAPILICSMKTSIELGTPHPRQGHAEAIANRNFMSQRMTEEMNEIIRVLQLTTYDE 5956
Query: 256 DAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCAG 315
D W + + M++AL++ S L A WL DP A G GE+AIR+I + A ++
Sbjct: 5955 DEWDADNVTVMRKALSAAKSLLTAALDWLADPHARSGAVGEKAIRRICEYADRISARALP 5776
Query: 316 KERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLE 375
++ + I + + TD++ +LR GQ P A Q AR+L+
Sbjct: 5775 EDAQSIKRSIFEITSFTDELCNLRNNGQ---PDRENLAAQ--------------TARRLK 5647
Query: 376 AMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEA 415
+ S+ S DA QN A +GG G L +A
Sbjct: 5646 DLVGSQNSSGLMGDALQN--AQRHGGANPAHTAAGRLEQA 5533
Score = 97.8 bits (242), Expect(2) = 2e-26
Identities = 51/101 (50%), Positives = 70/101 (68%), Gaps = 16/101 (15%)
Frame = -1
Query: 895 NQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA-------- 946
+QPM+ AA LH+E ++WSS+ NDI+AAAKRMA+LMA +S+LVRG GTK+
Sbjct: 1484 HQPMLAAAHNLHNELKQWSSQENDIVAAAKRMAILMARLSQLVRGEGGTKKVSFVEKKIV 1305
Query: 947 --------LIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRT 979
LI C+K IA +S+EVTRLA ++A+ CTD ++RT
Sbjct: 1304 ILMLNLKDLINCSKAIADSSEEVTRLAVQLARLCTDIKMRT 1182
Score = 87.8 bits (216), Expect = 5e-15
Identities = 43/65 (66%), Positives = 52/65 (79%)
Frame = -1
Query: 98 DPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDL 157
DPYSVPAR LIDG+RGIL GTS LLL FDE+EVRKIIRVC+ +Y+ V+EV+E+M DL
Sbjct: 6479 DPYSVPARKKLIDGARGILQGTSALLLCFDESEVRKIIRVCRKANDYVAVSEVIESMADL 6300
Query: 158 VTYTK 162
+ K
Sbjct: 6299 QQFVK 6285
Score = 75.1 bits (183), Expect = 4e-11
Identities = 35/51 (68%), Positives = 42/51 (81%)
Frame = -1
Query: 1014 EESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPW 1064
EE ++A + LVHNAQNLMQSVK+ VR AEAASIKIRT++G LRW+RK W
Sbjct: 707 EEDDEAMQQLVHNAQNLMQSVKDVVRAAEAASIKIRTNSGLRLRWLRKPMW 555
Score = 69.3 bits (168), Expect = 2e-09
Identities = 58/189 (30%), Positives = 90/189 (46%), Gaps = 28/189 (14%)
Frame = -3
Query: 371 ARKLEAMTNSKQSIAKKIDAAQNWLADPNG--GPEGEEQIRGALAEARKIAELCDDPKER 428
A + M + + + AA +WLADP+ G GE+ IR A +I+ P++
Sbjct: 5943 ADNVTVMRKALSAAKSLLTAALDWLADPHARSGAVGEKAIRRICEYADRISARAL-PEDA 5767
Query: 429 DDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNR------AVA 482
I RS+ EI++ T +L +LR G+ P+ LA Q A L++L N A+
Sbjct: 5766 QSIKRSIFEITSFTDELCNLRNNGQ---PDRENLAAQTARRLKDLVGSQNSSGLMGDALQ 5596
Query: 483 NSRP---AKAAVHLEGKIEQA-----------------QRWIDNPTVDDRGVGQAAIRGL 522
N++ A A G++EQA RW+DNP +DD G+G A+R L
Sbjct: 5595 NAQRHGGANPAHTAAGRLEQALR*IKYYFETFYKYEYYSRWLDNPGLDDGGLGLQALRLL 5416
Query: 523 VAEGHRLAN 531
A+ +LA+
Sbjct: 5415 TADARKLAD 5389
Score = 62.0 bits (149), Expect = 3e-07
Identities = 35/103 (33%), Positives = 52/103 (49%), Gaps = 1/103 (0%)
Frame = -3
Query: 597 DVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXX-XXXX 655
D F+D TTP+K A A P PNRE+ F +++ +HS
Sbjct: 4989 DDFADITTPLKQFVEAVHADPYDPNREQNFVDKSQRLTDHSQSMTTTARLVASCGPSKSK 4810
Query: 656 STVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETM 698
TVE I + + +LTPQ+V+A R+ L NPG++ +HFE +
Sbjct: 4809 KTVEAILDTAEKVEQLTPQLVNAGRVRLHNPGSE---QHFENI 4690
Score = 54.3 bits (129), Expect = 7e-05
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 19/109 (17%)
Frame = -1
Query: 701 QWIDNVEKMTGLVDEAIDTKSLLDASEE-------------------AIKKDLDKCKVAM 741
Q+ D + ++ VD+AIDT + ASE A+++ + C+ A+
Sbjct: 4475 QYADALHRLRSHVDDAIDTGEFVRASETVSLLEILKIYRVTFICKL*AMRRYTNHCEGAI 4296
Query: 742 ANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDEL 790
LV ++ IAR NR+L+ A+ E +NSE+P F V+ A+D+L
Sbjct: 4295 NGADAHGLVNNSSQIARLGNRVLMTAQNEADNSEEPSFVSRVRNAADQL 4149
Score = 48.9 bits (115), Expect(2) = 2e-26
Identities = 24/27 (88%), Positives = 26/27 (95%)
Frame = -3
Query: 981 LLQVCERIPTISTQLKILSTVKATMLG 1007
LLQV ERIPTI+TQLK+LSTVKATMLG
Sbjct: 1125 LLQVSERIPTIATQLKVLSTVKATMLG 1045
Score = 45.1 bits (105), Expect = 0.041
Identities = 22/38 (57%), Positives = 27/38 (70%)
Frame = -1
Query: 20 ISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRV 57
+S LVI+HEE DG A+PDLT PV V AV NL++V
Sbjct: 7379 VSRLVILHEEAN-DGNAMPDLTGPVGMVSRAVGNLIQV 7269
Score = 42.0 bits (97), Expect = 0.34
Identities = 18/21 (85%), Positives = 21/21 (99%)
Frame = -2
Query: 1 MPVFHTRTIESILEPVAQQIS 21
MPVFHT+TIE+ILEPVAQQ+S
Sbjct: 9121 MPVFHTKTIENILEPVAQQVS 9059
Score = 39.3 bits (90), Expect = 2.2
Identities = 19/46 (41%), Positives = 30/46 (64%)
Frame = -2
Query: 428 RDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNL 473
R+ +L +I L ++LADL R+G G+SPEA + Q+ AL++L
Sbjct: 5269 RNRLLGLCSDIDRLAAQLADLERRGLGNSPEAHQIRNQLKNALRDL 5132
>gb|J04804.1|CELDEB1A C.elegans vinculin (deb-1) gene, complete cds
Length = 12263
Score = 139 bits (350), Expect = 2e-30
Identities = 93/280 (33%), Positives = 143/280 (50%), Gaps = 1/280 (0%)
Frame = +3
Query: 137 VCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMN 196
VC+G +L + T +D+ P + + ++ RQQELTHQ HR +L+ M+
Sbjct: 5268 VCEGNFLFLN*L*YIPTFQDI-------SPVLHDVTNDVNLRQQELTHQVHREILIRCMD 5426
Query: 197 TVKELLPVLISAMKIFVTTKNSK-NQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDE 255
++K + P+LI +MK + QG EA+ NRNF ++M+ E+NEIIRVLQLT++DE
Sbjct: 5427 SIKVIAPILICSMKTSIELGTPHPRQGHAEAIANRNFMSQRMTEEMNEIIRVLQLTTYDE 5606
Query: 256 DAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCAG 315
D W + + M++AL++ S L A WL DP A G GE+AIR+I + A ++
Sbjct: 5607 DEWDADNVTVMRKALSAAKSLLTAALDWLADPHARSGAVGEKAIRRICEYADRISARALP 5786
Query: 316 KERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLE 375
++ + I + + TD++ +LR GQ P A Q AR+L+
Sbjct: 5787 EDAQSIKRSIFEITSFTDELCNLRNNGQ---PDRENLAAQ--------------TARRLK 5915
Query: 376 AMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEA 415
+ S+ S DA QN A +GG G L +A
Sbjct: 5916 DLVGSQNSSGLMGDALQN--AQRHGGANPAHTAAGRLEQA 6029
Score = 130 bits (326), Expect = 1e-27
Identities = 75/147 (51%), Positives = 96/147 (65%), Gaps = 34/147 (23%)
Frame = +1
Query: 895 NQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA-------- 946
+QPM+ AA LH+E ++WSS+ NDI+AAAKRMA+LMA +S+LVRG GTK+
Sbjct: 10078 HQPMLAAAHNLHNELKQWSSQENDIVAAAKRMAILMARLSQLVRGEGGTKKVSFVEKKIV 10257
Query: 947 --------LIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRT------------------N 980
LI C+K IA +S+EVTRLA ++A+ CTD ++RT
Sbjct: 10258 ILMLNLKDLINCSKAIADSSEEVTRLAVQLARLCTDIKMRTVSHLVHSI*RFKIYFHFQA 10437
Query: 981 LLQVCERIPTISTQLKILSTVKATMLG 1007
LLQV ERIPTI+TQLK+LSTVKATMLG
Sbjct: 10438 LLQVSERIPTIATQLKVLSTVKATMLG 10518
Score = 87.8 bits (216), Expect = 5e-15
Identities = 43/65 (66%), Positives = 52/65 (79%)
Frame = +1
Query: 98 DPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDL 157
DPYSVPAR LIDG+RGIL GTS LLL FDE+EVRKIIRVC+ +Y+ V+EV+E+M DL
Sbjct: 5083 DPYSVPARKKLIDGARGILQGTSALLLCFDESEVRKIIRVCRKANDYVAVSEVIESMADL 5262
Query: 158 VTYTK 162
+ K
Sbjct: 5263 QQFVK 5277
Score = 75.1 bits (183), Expect = 4e-11
Identities = 35/51 (68%), Positives = 42/51 (81%)
Frame = +3
Query: 1014 EESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPW 1064
EE ++A + LVHNAQNLMQSVK+ VR AEAASIKIRT++G LRW+RK W
Sbjct: 10857 EEDDEAMQQLVHNAQNLMQSVKDVVRAAEAASIKIRTNSGLRLRWLRKPMW 11009
Score = 69.3 bits (168), Expect = 2e-09
Identities = 58/189 (30%), Positives = 90/189 (46%), Gaps = 28/189 (14%)
Frame = +3
Query: 371 ARKLEAMTNSKQSIAKKIDAAQNWLADPNG--GPEGEEQIRGALAEARKIAELCDDPKER 428
A + M + + + AA +WLADP+ G GE+ IR A +I+ P++
Sbjct: 5619 ADNVTVMRKALSAAKSLLTAALDWLADPHARSGAVGEKAIRRICEYADRISARAL-PEDA 5795
Query: 429 DDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNR------AVA 482
I RS+ EI++ T +L +LR G+ P+ LA Q A L++L N A+
Sbjct: 5796 QSIKRSIFEITSFTDELCNLRNNGQ---PDRENLAAQTARRLKDLVGSQNSSGLMGDALQ 5966
Query: 483 NSRP---AKAAVHLEGKIEQA-----------------QRWIDNPTVDDRGVGQAAIRGL 522
N++ A A G++EQA RW+DNP +DD G+G A+R L
Sbjct: 5967 NAQRHGGANPAHTAAGRLEQALR*IKYYFETFYKYEYYSRWLDNPGLDDGGLGLQALRLL 6146
Query: 523 VAEGHRLAN 531
A+ +LA+
Sbjct: 6147 TADARKLAD 6173
Score = 62.0 bits (149), Expect = 3e-07
Identities = 35/103 (33%), Positives = 52/103 (49%), Gaps = 1/103 (0%)
Frame = +3
Query: 597 DVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXX-XXXX 655
D F+D TTP+K A A P PNRE+ F +++ +HS
Sbjct: 6573 DDFADITTPLKQFVEAVHADPYDPNREQNFVDKSQRLTDHSQSMTTTARLVASCGPSKSK 6752
Query: 656 STVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETM 698
TVE I + + +LTPQ+V+A R+ L NPG++ +HFE +
Sbjct: 6753 KTVEAILDTAEKVEQLTPQLVNAGRVRLHNPGSE---QHFENI 6872
Score = 54.3 bits (129), Expect = 7e-05
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 19/109 (17%)
Frame = +1
Query: 701 QWIDNVEKMTGLVDEAIDTKSLLDASEE-------------------AIKKDLDKCKVAM 741
Q+ D + ++ VD+AIDT + ASE A+++ + C+ A+
Sbjct: 7087 QYADALHRLRSHVDDAIDTGEFVRASETVSLLEILKIYRVTFICKL*AMRRYTNHCEGAI 7266
Query: 742 ANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDEL 790
LV ++ IAR NR+L+ A+ E +NSE+P F V+ A+D+L
Sbjct: 7267 NGADAHGLVNNSSQIARLGNRVLMTAQNEADNSEEPSFVSRVRNAADQL 7413
Score = 45.1 bits (105), Expect = 0.041
Identities = 22/38 (57%), Positives = 27/38 (70%)
Frame = +1
Query: 20 ISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRV 57
+S LVI+HEE DG A+PDLT PV V AV NL++V
Sbjct: 4183 VSRLVILHEEAN-DGNAMPDLTGPVGMVSRAVGNLIQV 4293
Score = 42.0 bits (97), Expect = 0.34
Identities = 18/21 (85%), Positives = 21/21 (99%)
Frame = +2
Query: 1 MPVFHTRTIESILEPVAQQIS 21
MPVFHT+TIE+ILEPVAQQ+S
Sbjct: 2441 MPVFHTKTIENILEPVAQQVS 2503
Score = 39.3 bits (90), Expect = 2.2
Identities = 19/46 (41%), Positives = 30/46 (64%)
Frame = +2
Query: 428 RDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNL 473
R+ +L +I L ++LADL R+G G+SPEA + Q+ AL++L
Sbjct: 6293 RNRLLGLCSDIDRLAAQLADLERRGLGNSPEAHQIRNQLKNALRDL 6430
>gb|U03100.1|HSU03100 Human alpha2(E)-catenin mRNA, complete cds
Length = 3526
Score = 137 bits (344), Expect = 8e-30
Identities = 134/557 (24%), Positives = 222/557 (39%), Gaps = 41/557 (7%)
Frame = +2
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKARMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ ++++A+
Sbjct: 992 RERIVAECNAVRQACRTCVSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1171
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXX 654
VSD F +T P+ +L AA N +EV E A F H+
Sbjct: 1172 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSIS--- 1327
Query: 655 XSTVEGIQASVKTARELT---PQVVSAAR-ILLRNPGNQAAYEHFETMKNQWIDNVEKMT 710
+ EG++ +A +L PQV++AA L P ++ A E+ + K QW V +T
Sbjct: 1328 -NNEEGVKLVRMSASQLEAGCPQVINAATWALAPKPQSKLAQENMDLFKEQWEKQVRVLT 1504
Query: 711 GLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKRE 770
VD+ L SE I +D++KC +A+ L A +I RA R++ V E
Sbjct: 1505 DAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSE 1684
Query: 771 VENSEDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRIL 825
++N E + E V A+ LS T+ P + +A++ + + P + F+D+ +
Sbjct: 1685 MDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVY 1864
Query: 826 GAVAKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXX 885
+ +R+A T++
Sbjct: 1865 DGIRDIRKAVLMIRTPEELDDSDFE----TEDFDVRSETSVQTEDDQLIAGQSARAIMAQ 2032
Query: 886 XXQKAGEVINQPMMMAARQ---LHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSG 942
Q+ I + + + L E KW GNDII AK+M ++M EM+ RG
Sbjct: 2033 LPQEQKAKIREQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGP 2212
Query: 943 TKRA--LIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILST 1000
K +I AK IA+A + +L + + C D + +LL +RI QL I S
Sbjct: 2213 LKNTSDVISAAKKIAEAGSRMDKLGRTIRDHCPDSACKQDLLAYLQRIALYCHQLNICSK 2392
Query: 1001 VKATM--LGRTNISDEESE----------------------QATEMLVHNAQNLMQSVKE 1036
VKA + LG + + + L+ A+NLM +V +
Sbjct: 2393 VKAEVQNLGGELVVSGNCDTCGALQGLKGWPPPLCLATHWVDSAMSLIQAAKNLMNAVVQ 2572
Query: 1037 TVREAEAASIKIRTDAG 1053
TV+ + AS K + G
Sbjct: 2573 TVKASYVASTKYQKSQG 2623
Score = 70.5 bits (171), Expect = 9e-10
Identities = 82/378 (21%), Positives = 158/378 (41%), Gaps = 9/378 (2%)
Frame = +2
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 68 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 247
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ + +LS + LL
Sbjct: 248 --ESQFLKEELVVAVEDVRKQGDLMKAAAGEFADDPCSSVKRGNMVRAAPALLSAVTRLL 421
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 422 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGNQYKALKPEVDKLNIMAAKRQQELK 601
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
HR + + ++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 602 DVGHRDQMAAARGILQSNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 766
Query: 244 IIRVLQLTSWDE-DAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGD----AGEQA 298
I Q T+ D+ + AL + D ++ + DP + + + E+
Sbjct: 767 ISNAAQATASDDASQHQGGGGGELAYALNNFDKQI------IVDPLSFSEERFRPSLEER 928
Query: 299 IRQILDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQV 356
+ I+ A + + C +RRE I+ C + Q G +++ +
Sbjct: 929 LESIISGAALMADSSCTRDDRRERIVAECNAVRQACRTCVSEYMGNAGRK----ERSDAL 1096
Query: 357 SQGLDVLTAKVENAARKL 374
+ +D +T K + R+L
Sbjct: 1097NSAIDKMTKKTRDLRRQL 1150
>gb|S87223.1|S87218S3 vinculin [human, Genomic, 434 nt, segment 3 of 3]
Length = 434
Score = 132 bits (333), Expect = 1e-28
Identities = 69/69 (100%), Positives = 69/69 (100%)
Frame = +3
Query: 916 GNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDK 975
GNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDK
Sbjct: 168 GNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDK 347
Query: 976 RIRTNLLQV 984
RIRTNLLQV
Sbjct: 348 RIRTNLLQV 374
>gb|S87180.1|S87175S3 meta-vinculin=muscle-specific variant of vinculin [human, Genomic,
434 nt, segment 3 of 3]
Length = 434
Score = 132 bits (333), Expect = 1e-28
Identities = 69/69 (100%), Positives = 69/69 (100%)
Frame = +3
Query: 916 GNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDK 975
GNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDK
Sbjct: 168 GNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDK 347
Query: 976 RIRTNLLQV 984
RIRTNLLQV
Sbjct: 348 RIRTNLLQV 374
>gb|AF016852.1|AF016852 Caenorhabditis elegans HMP-1 mRNA, complete cds
Length = 3220
Score = 122 bits (306), Expect = 2e-25
Identities = 125/537 (23%), Positives = 207/537 (38%), Gaps = 25/537 (4%)
Frame = +3
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALA---SQLQDSLKDLKARMQEAMTQE 594
+Q ++A+C+ + + G + +++ KDL+ ++ A+
Sbjct: 993 KQKIVAECNNLRQALQELLTEYEKSTGRRDDNDDIPLGIAEVHKRTKDLRRHLRRAIVDH 1172
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXX 654
+SD F DT TP+ LL AA EE R+ F+ H+
Sbjct: 1173 ISDAFLDTRTPLILLIEAAKE-----GHEENTRYRSKMFQEHANEIVSVARLSCQLSSDV 1337
Query: 655 XSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
S V IQ + +L PQV AA +L P ++ A E+ ET KN W D V +T +D
Sbjct: 1338 ES-VSVIQHTAAQLEKLAPQVAQAAILLCHQPTSKTAQENMETYKNAWFDKVRLLTTALD 1514
Query: 715 EAIDTKSLLDASEEAIKKDLDK-CKVAMANIQP--------QMLVAGATSIARRANRILL 765
L SE I +D ++ K AN + + A SI RA R+
Sbjct: 1515 NITTLDDFLAVSEAHIVEDCERGIKGITANASTPDENAANCETVDCAAGSIRGRALRVCD 1694
Query: 766 VAKREVENSEDPKFREAVKAASDEL-SKTISPMVMDAKAVAGNISDPGL----------Q 814
V E++ ++ ++ E VK A L ++ + A A+A GL
Sbjct: 1695 VVDAEMDFLQNSEYTETVKQAVRILKTQRVDQFAERASALANRQEAHGLTWDPKTKEEEM 1874
Query: 815 KSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXX 874
F+++ + AV +R A D +
Sbjct: 1875 NEFINACTLVHDAVKDIRHALLMNRSMNDVDSDVEYE---ADGVGAANADANRTISEQEN 2045
Query: 875 XXXXXXXXXXXXXQKAGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMS 934
+K I+ + + E KW GNDII+ A M +M M+
Sbjct: 2046 QQNLMRRLPEEEKKKIQAQID-IFKVTQTRFEREVAKWDETGNDIISLANNMCKIMMSMT 2222
Query: 935 RLVRGGSGTKRAL--IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTIS 992
RG K + I+ A++I+ ++ LA+++ ++ D + + +LL +I
Sbjct: 2223 EFTRGCGPLKTTMDVIRAAQEISLNGSKLNALARQIGEESADSQTKKDLLAYLSQITLYC 2402
Query: 993 TQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIR 1049
QL I S VKA + N + + L+ A+NL+ +V +TV+ A AS K R
Sbjct: 2403 QQLNICSKVKADVTQVGNELVVSALDSAMSLIQTARNLLTAVVQTVKAAYIASTKFR 2573
Score = 42.7 bits (99), Expect = 0.20
Identities = 44/214 (20%), Positives = 94/214 (43%), Gaps = 9/214 (4%)
Frame = +3
Query: 44 VAAVQAAVSNLVRVGKETVQ----TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDP 99
VA + AAV+N ++ G + D + A V++ ++Q + D
Sbjct: 174 VATLDAAVANFLQTGSFAISKCPIANSDPRAIDLLHEALGAVQDTGQVMIQTGRDFVRDS 353
Query: 100 YSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVET-----M 154
S R + R +L+ + L+ D +V+ I+ + E T +++E +
Sbjct: 354 TSTNKRAIATNSGRNLLTAVAKFLILADSIDVKVIVDKVDEVRE--TAHQMIEADTKIKV 527
Query: 155 EDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVT 214
+DL L + ++ + R +L R L+ + + +++ P+L ++ + FV
Sbjct: 528 DDLYNL---LISQIEELDITVRRRAIDLVKPNQRDDLLAARSALRQTAPLLYTSTRTFV- 695
Query: 215 TKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVL 248
++ EEA +NR++T ++M + +N + VL
Sbjct: 696 ----RHPEHEEARRNRDYTADEMHSALNALESVL 785
>ref|NM_073584.1| alpha-catenin
Length = 2784
Score = 122 bits (306), Expect = 2e-25
Identities = 125/537 (23%), Positives = 207/537 (38%), Gaps = 25/537 (4%)
Frame = +1
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALA---SQLQDSLKDLKARMQEAMTQE 594
+Q ++A+C+ + + G + +++ KDL+ ++ A+
Sbjct: 970 KQKIVAECNNLRQALQELLTEYEKSTGRRDDNDDIPLGIAEVHKRTKDLRRHLRRAIVDH 1149
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXX 654
+SD F DT TP+ LL AA EE R+ F+ H+
Sbjct: 1150 ISDAFLDTRTPLILLIEAAKE-----GHEENTRYRSKMFQEHANEIVSVARLSCQLSSDV 1314
Query: 655 XSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
S V IQ + +L PQV AA +L P ++ A E+ ET KN W D V +T +D
Sbjct: 1315 ES-VSVIQHTAAQLEKLAPQVAQAAILLCHQPTSKTAQENMETYKNAWFDKVRLLTTALD 1491
Query: 715 EAIDTKSLLDASEEAIKKDLDK-CKVAMANIQP--------QMLVAGATSIARRANRILL 765
L SE I +D ++ K AN + + A SI RA R+
Sbjct: 1492 NITTLDDFLAVSEAHIVEDCERGIKGITANASTPDENAANCETVDCAAGSIRGRALRVCD 1671
Query: 766 VAKREVENSEDPKFREAVKAASDEL-SKTISPMVMDAKAVAGNISDPGL----------Q 814
V E++ ++ ++ E VK A L ++ + A A+A GL
Sbjct: 1672 VVDAEMDFLQNSEYTETVKQAVRILKTQRVDQFAERASALANRQEAHGLTWDPKTKEEEM 1851
Query: 815 KSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXX 874
F+++ + AV +R A D +
Sbjct: 1852 NEFINACTLVHDAVKDIRHALLMNRSMNDVDSDVEYE---ADGVGAANADANRTISEQEN 2022
Query: 875 XXXXXXXXXXXXXQKAGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMS 934
+K I+ + + E KW GNDII+ A M +M M+
Sbjct: 2023 QQNLMRRLPEEEKKKIQAQID-IFKVTQTRFEREVAKWDETGNDIISLANNMCKIMMSMT 2199
Query: 935 RLVRGGSGTKRAL--IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTIS 992
RG K + I+ A++I+ ++ LA+++ ++ D + + +LL +I
Sbjct: 2200 EFTRGCGPLKTTMDVIRAAQEISLNGSKLNALARQIGEESADSQTKKDLLAYLSQITLYC 2379
Query: 993 TQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIR 1049
QL I S VKA + N + + L+ A+NL+ +V +TV+ A AS K R
Sbjct: 2380 QQLNICSKVKADVTQVGNELVVSALDSAMSLIQTARNLLTAVVQTVKAAYIASTKFR 2550
Score = 42.7 bits (99), Expect = 0.20
Identities = 44/214 (20%), Positives = 94/214 (43%), Gaps = 9/214 (4%)
Frame = +1
Query: 44 VAAVQAAVSNLVRVGKETVQ----TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDP 99
VA + AAV+N ++ G + D + A V++ ++Q + D
Sbjct: 151 VATLDAAVANFLQTGSFAISKCPIANSDPRAIDLLHEALGAVQDTGQVMIQTGRDFVRDS 330
Query: 100 YSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVET-----M 154
S R + R +L+ + L+ D +V+ I+ + E T +++E +
Sbjct: 331 TSTNKRAIATNSGRNLLTAVAKFLILADSIDVKVIVDKVDEVRE--TAHQMIEADTKIKV 504
Query: 155 EDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVT 214
+DL L + ++ + R +L R L+ + + +++ P+L ++ + FV
Sbjct: 505 DDLYNL---LISQIEELDITVRRRAIDLVKPNQRDDLLAARSALRQTAPLLYTSTRTFV- 672
Query: 215 TKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVL 248
++ EEA +NR++T ++M + +N + VL
Sbjct: 673 ----RHPEHEEARRNRDYTADEMHSALNALESVL 762
>gb|L04933.1|HUMVCLX Human vinculin (VCL) gene exon 1, 5' end
Length = 1435
Score = 112 bits (281), Expect = 2e-22
Identities = 57/60 (95%), Positives = 58/60 (96%)
Frame = +3
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRV +
Sbjct: 1191 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVSAQ 1370
>gb|S52276.1|S52270S4 vinculin=talin-binding cytoskeletal protein {exons 3-6} [chickens,
Genomic, 205 nt, segment 4 of 4]
Length = 205
Score = 107 bits (267), Expect = 7e-21
Identities = 52/57 (91%), Positives = 56/57 (98%)
Frame = +3
Query: 205 LISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASK 261
+ +AMKIFVTTKN+K+QGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASK
Sbjct: 12 IFTAMKIFVTTKNTKSQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASK 182
>gb|L13299.1|MUSVIN01 Mus musculus vinculin gene, exon 3
Length = 1073
Score = 103 bits (258), Expect = 7e-20
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 74 MPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEV 131
+PP +VENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEV
Sbjct: 359 LPP---RVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEV 523
>gb|S52270.1|S52270S1 vinculin=talin-binding cytoskeletal protein {exons 3-6} [chickens,
Genomic, 172 nt, segment 1 of 4]
Length = 172
Score = 101 bits (252), Expect = 4e-19
Identities = 50/54 (92%), Positives = 53/54 (97%)
Frame = +2
Query: 78 FIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEV 131
F +VENACTKLV+AAQMLQ+DPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEV
Sbjct: 2 FHRVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEV 163
>gb|BC013847.1|BC013847 Homo sapiens, clone IMAGE:4387297, mRNA
Length = 1687
Score = 84.0 bits (206), Expect = 8e-14
Identities = 55/102 (53%), Positives = 56/102 (53%)
Frame = +1
Query: 799 MDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDEL 858
MDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA RLTDEL
Sbjct: 1 MDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEPDFPPPPPDLEQLRLTDEL 180
Query: 859 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMM 900
A QKAGEVINQPMM+
Sbjct: 181 APPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMML 306
>gb|S52272.1|S52270S3 vinculin=talin-binding cytoskeletal protein {exons 3-6} [chickens,
Genomic, 155 nt, segment 3 of 4]
Length = 155
Score = 83.2 bits (204), Expect = 1e-13
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 167 GMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAM 209
GMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLIS +
Sbjct: 16 GMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISGI 144
>gb|AC010027.5| Drosophila melanogaster 3L BAC RP98-22B15 (Roswell Park Cancer Institute
Drosophila BAC Library) complete sequence
Length = 168058
Score = 80.1 bits (196), Expect = 1e-12
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 4/228 (1%)
Frame = -3
Query: 566 SPQARALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEV 625
SP Q+ +DL+ ++++A+ VSD F +TTTP+ L AA + E+
Sbjct: 151559 SPGLSRAIDQMCRKTRDLRRQLRKAVVDHVSDSFLETTTPLLDLIEAAKS-----GNEKK 151395
Query: 626 FDERAANFENHSXXXXXXXXXXXXXXXXXXSTVEGIQASVKTARELTPQVVSAARILLRN 685
E++ F H+ V+ ++ + L PQV++AA IL
Sbjct: 151394 VREKSEIFTKHAEKLVEVANLVCSMSNNEDG-VKMVRYAAAQIESLCPQVINAASILTVR 151218
Query: 686 PGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQ 745
P ++ A E+ T + W V +T VD+ L SE I +D++KC +A+
Sbjct: 151217 PNSKVAQENMTTYRQAWEVQVRILTEAVDDITTIDDFLAVSENHILEDVNKCVMALQVGD 151038
Query: 746 PQMLVAGATSIARRANRILLVAKREVENSE----DPKFREAVKAASDE 789
+ L A A +I R++R+ V + E++N E + EAVK D+
Sbjct: 151037 ARDLRATAGAIQGRSSRVCNVVEAEMDNYEPCIYTKRVLEAVKVLRDQ 150894
Score = 45.1 bits (105), Expect = 0.041
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = -1
Query: 938 RGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKI 997
RG T +I AK I++A ++ +L +E+A+QC + + +LL +RI Q++I
Sbjct: 141649 RGPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKKDLLAYLQRIALYCHQIQI 141470
Query: 998 LSTVKATMLGRTNISDE 1014
S VKA + NIS E
Sbjct: 141469 TSKVKADV---QNISGE 141428
>gb|AE002656.1|AE002656 Drosophila melanogaster genomic scaffold 142000013386032, complete
sequence
Length = 192318
Score = 80.1 bits (196), Expect = 1e-12
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 4/228 (1%)
Frame = -3
Query: 566 SPQARALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEV 625
SP Q+ +DL+ ++++A+ VSD F +TTTP+ L AA + E+
Sbjct: 166774 SPGLSRAIDQMCRKTRDLRRQLRKAVVDHVSDSFLETTTPLLDLIEAAKS-----GNEKK 166610
Query: 626 FDERAANFENHSXXXXXXXXXXXXXXXXXXSTVEGIQASVKTARELTPQVVSAARILLRN 685
E++ F H+ V+ ++ + L PQV++AA IL
Sbjct: 166609 VREKSEIFTKHAEKLVEVANLVCSMSNNEDG-VKMVRYAAAQIESLCPQVINAASILTVR 166433
Query: 686 PGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQ 745
P ++ A E+ T + W V +T VD+ L SE I +D++KC +A+
Sbjct: 166432 PNSKVAQENMTTYRQAWEVQVRILTEAVDDITTIDDFLAVSENHILEDVNKCVMALQVGD 166253
Query: 746 PQMLVAGATSIARRANRILLVAKREVENSE----DPKFREAVKAASDE 789
+ L A A +I R++R+ V + E++N E + EAVK D+
Sbjct: 166252 ARDLRATAGAIQGRSSRVCNVVEAEMDNYEPCIYTKRVLEAVKVLRDQ 166109
Score = 45.1 bits (105), Expect = 0.041
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = -1
Query: 938 RGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKI 997
RG T +I AK I++A ++ +L +E+A+QC + + +LL +RI Q++I
Sbjct: 156864 RGPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKKDLLAYLQRIALYCHQIQI 156685
Query: 998 LSTVKATMLGRTNISDE 1014
S VKA + NIS E
Sbjct: 156684 TSKVKADV---QNISGE 156643
>ref|XM_045972.5| Homo sapiens alpha-catenin-like protein (VR22), mRNA
Length = 1006
Score = 78.6 bits (192), Expect = 3e-12
Identities = 51/147 (34%), Positives = 75/147 (50%), Gaps = 2/147 (1%)
Frame = +2
Query: 904 QLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASDEV 961
+L E W NDII AK M ++M EM+ RG K +I AK I+++ +
Sbjct: 374 KLDAEIEIWDDTSNDIIVLAKNMCMIMMEMTDFTRGKGPLKHTTDVIYAAKMISESGSRM 553
Query: 962 TRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATE 1021
LA+++A QC D + +LL E+I S QLKI S VKA + + +
Sbjct: 554 DVLARQIANQCPDPSCKQDLLAYLEQIKFYSHQLKICSQVKAEIQNLGGELIMSALDSVT 733
Query: 1022 MLVHNAQNLMQSVKETVREAEAASIKI 1048
L+ A+NLM +V +TV+ + AS KI
Sbjct: 734 SLIQAAKNLMNAVVQTVKMSYIASTKI 814
>gb|S52271.1|S52270S2 vinculin=talin-binding cytoskeletal protein {exons 3-6} [chickens,
Genomic, 127 nt, segment 2 of 4]
Length = 127
Score = 77.0 bits (188), Expect = 1e-11
Identities = 37/38 (97%), Positives = 38/38 (99%)
Frame = +1
Query: 131 VRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGM 168
VRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPG+
Sbjct: 10 VRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGL 123
>gb|L13300.1|MUSVIN02 Mus musculus vinculin gene, exon 4
Length = 389
Score = 77.0 bits (188), Expect = 1e-11
Identities = 37/38 (97%), Positives = 38/38 (99%)
Frame = +1
Query: 130 EVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPG 167
+VRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPG
Sbjct: 46 QVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPG 159
>gb|AC024780.1|AC024780 Caenorhabditis elegans cosmid Y43B11AR, complete sequence
Length = 15768
Score = 75.1 bits (183), Expect = 4e-11
Identities = 35/51 (68%), Positives = 42/51 (81%)
Frame = -3
Query: 1014 EESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPW 1064
EE ++A + LVHNAQNLMQSVK+ VR AEAASIKIRT++G LRW+RK W
Sbjct: 15175 EEDDEAMQQLVHNAQNLMQSVKDVVRAAEAASIKIRTNSGLRLRWLRKPMW 15023
Score = 48.9 bits (115), Expect(2) = 6e-10
Identities = 24/27 (88%), Positives = 26/27 (95%)
Frame = -2
Query: 981 LLQVCERIPTISTQLKILSTVKATMLG 1007
LLQV ERIPTI+TQLK+LSTVKATMLG
Sbjct: 15593 LLQVSERIPTIATQLKVLSTVKATMLG 15513
Score = 42.0 bits (97), Expect(2) = 6e-10
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = -3
Query: 947 LIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRT 979
LI C+K IA +S+EVTRLA ++A+ CTD ++RT
Sbjct: 15748 LINCSKAIADSSEEVTRLAVQLARLCTDIKMRT 15650
>emb|Z81579.1|CER13H4 Caenorhabditis elegans cosmid R13H4, complete sequence
Length = 38504
Score = 71.6 bits (174), Expect = 4e-10
Identities = 48/163 (29%), Positives = 71/163 (43%)
Frame = +3
Query: 574 SQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANF 633
+++ KDL+ ++ A+ +SD F DT TP+ LL AA EE R+ F
Sbjct: 16242 AEVHKRTKDLRRHLRRAIVDHISDAFLDTRTPLILLIEAAKE-----GHEENTRYRSKMF 16406
Query: 634 ENHSXXXXXXXXXXXXXXXXXXSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYE 693
+ H+ S V IQ + +L PQV AA +L P ++ A E
Sbjct: 16407 QEHANEIVSVARLSCQLSSDVES-VSVIQHTAAQLEKLAPQVAQAAILLCHQPTSKTAQE 16583
Query: 694 HFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDK 736
+ ET KN W D V +T +D L SE I +D ++
Sbjct: 16584 NMETYKNAWFDKVRLLTTALDNITTLDDFLAVSEAHIVEDCER 16712
Score = 52.8 bits (125), Expect = 2e-04
Identities = 29/96 (30%), Positives = 48/96 (49%), Gaps = 2/96 (2%)
Frame = +3
Query: 908 EARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRAL--IQCAKDIAKASDEVTRLA 965
E KW GNDII+ A M +M M+ RG K + I+ A++I+ ++ LA
Sbjct: 17376 EVAKWDETGNDIISLANNMCKIMMSMTEFTRGCGPLKTTMDVIRAAQEISLNGSKLNALA 17555
Query: 966 KEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTV 1001
+++ ++ D + + +LL +I QL I S V
Sbjct: 17556 RQIGEESADSQTKKDLLAYLSQITLYCQQLNICSKV 17663
>gb|BC020328.1|BC020328 Mus musculus, clone IMAGE:4020609, mRNA
Length = 1867
Score = 68.6 bits (166), Expect = 3e-09
Identities = 43/136 (31%), Positives = 66/136 (47%)
Frame = +1
Query: 658 VEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAI 717
V+ ++ S L PQV++AA L P ++ A E+ + K QW V +T VD+
Sbjct: 34 VKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDIT 213
Query: 718 DTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDP 777
L SE I +D++KC +A+ L A +I RA R++ V E++N E
Sbjct: 214 SIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPG 393
Query: 778 KFREAVKAASDELSKT 793
+ E V A+ LS T
Sbjct: 394 VYTEKVLEATKLLSNT 441
>gb|BC022004.1|BC022004 Homo sapiens, Similar to alpha-catenin-like protein, clone
MGC:26194 IMAGE:4823848, mRNA, complete cds
Length = 2379
Score = 61.2 bits (147), Expect = 5e-07
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 1/203 (0%)
Frame = +3
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKA-IPDLTAPVAAVQAAVSNLVRVGKETVQT 64
T T+E +LEP+ Q++ LV + K + +A+V+ A NL+ G++ Q
Sbjct: 285 TFTVEKLLEPLIIQVTTLVNCPQNPSSRKKGRSKRASVLLASVEEATWNLLDKGEKIAQ- 461
Query: 65 TEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLL 124
E +LK ++ + KV L +A+ DP +P R+ ++ +R +L+ + LL+
Sbjct: 462 -EATVLKDELTASLEKVRKESEALKVSAERFTDDPCFLPKREAVVQAARALLAAVTRLLI 638
Query: 125 TFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTH 184
D +V +++ + V DL + LG + + + +RQQ+L
Sbjct: 639 LADMIDVMCLLQHVSAFQRTFESLKNVANKSDLQKTYQKLGKELENLDYLAFKRQQDLKS 818
Query: 185 QEHRVMLVNSMNTVKELLPVLIS 207
R + + ++KE P+L S
Sbjct: 819 PNQRDEIAGARASLKENSPLLHS 887
>gb|S87218.1|S87218S1 vinculin [human, Genomic, 260 nt, segment 1 of 3]
Length = 260
Score = 60.5 bits (145), Expect = 9e-07
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 888 QKAGEVINQPMMMAARQLHDEARKWSSK 915
QKAGEVINQPMMMAARQLHDEARKWSSK
Sbjct: 161 QKAGEVINQPMMMAARQLHDEARKWSSK 244
>gb|S87175.1|S87175S1 meta-vinculin=muscle-specific variant of vinculin [human, Genomic,
260 nt, segment 1 of 3]
Length = 260
Score = 60.5 bits (145), Expect = 9e-07
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 888 QKAGEVINQPMMMAARQLHDEARKWSSK 915
QKAGEVINQPMMMAARQLHDEARKWSSK
Sbjct: 161 QKAGEVINQPMMMAARQLHDEARKWSSK 244
>emb|Z37994.1|HSCTNNA1P H.sapiens alpha E-catenin pseudogene
Length = 4950
Score = 52.8 bits (125), Expect = 2e-04
Identities = 80/379 (21%), Positives = 130/379 (34%), Gaps = 28/379 (7%)
Frame = +2
Query: 658 VEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAI 717
V+ ++ S L PQVV+AA + L P ++ A E+ + K + G
Sbjct: 2033 VKLVRMSASQLEALCPQVVNAA-LALAKPQSRLAQENMDLFK--------RTMGKTSPCS 2185
Query: 718 DTKS--------LLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKR 769
LL E+ +KC +A+ L A++I A + +
Sbjct: 2186 HRCC**YYFH**LLGCLRESHFGKWNKCIIALQEKDVDGLDCTASAIQGWAAWAIHIVTS 2365
Query: 770 EVENSEDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRI 824
E++N E + E V A+ LS T+ P + +A++ + + P + F+++ +
Sbjct: 2366 EMDNYEPGVYTEKVLEATKLLSNTVMPCFTEQAEAAVEALSSDPAQPMDENEFINASCLV 2545
Query: 825 LGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXX 884
G + +R+A
Sbjct: 2546 YGGIRDIRKAVLMIRTPEDLDDSYFEMEDFNVRSRMSIQTKDNQLIAGQSVQAIMAQLP* 2725
Query: 885 XXXQKAGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTK 944
K E + +L E KW + NDII AK+M ++M E++ G
Sbjct: 2726 EQKAKTAEQVAS-FQEEKSKLDAEVSKWDNSANDIIVLAKQMCMIMMEVTDFT*GKGPLP 2902
Query: 945 RAL--IQCAKDIAKASDEVTRLAKEVAKQCTDKRIR-----------TNLLQVCERIPTI 991
L I AK IA+A + +L + C D + LL I
Sbjct: 2903 NTLDVISAAKKIAEAGSRMDKLGCTITDHCPDSACKQARPARLSLP*LGLLAYLHCIALY 3082
Query: 992 STQLKILSTVKATM--LGR 1008
L I S VKA M LGR
Sbjct: 3083 CHLLNICSKVKAEMQNLGR 3139
>emb|X80168.1|SPEMM3G S.pyogenes emm3 gene
Length = 1746
Score = 46.2 bits (108), Expect = 0.018
Identities = 109/569 (19%), Positives = 220/569 (38%), Gaps = 29/569 (5%)
Frame = +1
Query: 76 PAFIKVENACTKLVQAAQMLQS------DPYSVPARDYLIDGSRGILSGTSD----LLLT 125
P +K++N L+ L + YS A + L G +D LL
Sbjct: 151 PRHVKLKNEIENLLDQVTQLYNKHNSNYQQYSAQAGRLDLRQKAEYLKGLNDWAERLLQE 330
Query: 126 FDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQE---- 181
+ +V+K++ +V +DL K L + K K + ++
Sbjct: 331 LNGEDVKKVL------------GKVAFEKDDLEKEVKELKEKIDKKEKEYQDLDKDFDLA 474
Query: 182 -----LTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEK 236
L+ + H+ L V E + + T K +++ + +N +
Sbjct: 475 KQGYVLSDKRHQQELEEKEKKVTEATAKVGQISEELETVKQKVESTMQDLTEKQN----R 642
Query: 237 MSAEINEIIRVLQLTSWDEDAWA---SKDTEAMKRALASIDSKLNQAKGWLRDPSASPGD 293
+S E+ Q D + A + D + ++ +A +++KL +AK +
Sbjct: 643 VSQLEQELATTKQNAKEDFELAALANAADKQKLEAKIADLETKLKEAKEDFELAALGHQH 822
Query: 294 AGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKA 353
A + ++ ++ ++ +L +E+++IL + G D A +A+ + + KA
Sbjct: 823 AHNEYQAKLAEKDDQIKQL---EEQKQILDASRK-GTARDLEAVRQAKKATEAELNNLKA 990
Query: 354 Q--QVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGA 411
+ +V++ +L A + AR LEA+ +K + + + +G + A
Sbjct: 991 ELAKVTEQKQILDASRKGTARDLEAVRQAKAQVEAALKQLEEQNRISEASRKGLRRDLDA 1170
Query: 412 LAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG-KGDSPEARALAKQVATAL 470
EA+K E K+ ++ L ++ +++D RQG + D +R KQV AL
Sbjct: 1171SREAKKQVE-----KDLANLTAELDKVKE-EKQISDASRQGLRRDLDASREAKKQVEKAL 1332
Query: 471 QNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGL----VAEG 526
+ ANS+ A A L ++E++++ + + + +A R L +
Sbjct: 1333EE---------ANSKLA-ALEKLNKELEESKKLTEKEKAELQAKLEAEARALKEQLAKQA 1482
Query: 527 HRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAR 586
LA + G K G+G++PQA +Q + +K+ K +
Sbjct: 1483EELAKLRAG--------KASDSQIPDTKPGNKAVPGKGQAPQAGTKPNQNKAPMKETKRQ 1638
Query: 587 MQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
+ T E ++ F T + ++A A A
Sbjct: 1639LPS--TGETANPFF-TAAALTVMATAGVA 1716
>ref|NM_017240.1| Rattus norvegicus myosin heavy chain, cardiac muscle, fetal (Myh7),
mRNA
Length = 5925
Score = 46.2 bits (108), Expect = 0.018
Identities = 79/385 (20%), Positives = 153/385 (39%), Gaps = 47/385 (12%)
Frame = +2
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 4778 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 4951
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 4952 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 5128
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 5129 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 5308
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R + +A++ ++ Q L+ ++EN
Sbjct: 5309 EEL--KKEQDTSAHLERMKNNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 5482
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 5483 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 5662
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDS-----PE 458
EEQ L++ RK+ D+ +ER DI S +++ L +K D+ +G + P
Sbjct: 5663 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGAKGLNEE*ILCYPT 5836
Query: 459 ARALAK--QVATALQNLQTKTNRAV 481
R K + Q+L+ K N+A+
Sbjct: 5837 LRMPVKP*DLEPLKQHLRQKHNKAI 5911
>emb|X15939.1|RNMHCB Rat mRNA for beta cardiac myosin heavy chain
Length = 5925
Score = 46.2 bits (108), Expect = 0.018
Identities = 79/385 (20%), Positives = 153/385 (39%), Gaps = 47/385 (12%)
Frame = +2
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 4778 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 4951
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 4952 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 5128
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 5129 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 5308
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R + +A++ ++ Q L+ ++EN
Sbjct: 5309 EEL--KKEQDTSAHLERMKNNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 5482
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 5483 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 5662
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDS-----PE 458
EEQ L++ RK+ D+ +ER DI S +++ L +K D+ +G + P
Sbjct: 5663 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGAKGLNEE*ILCYPT 5836
Query: 459 ARALAK--QVATALQNLQTKTNRAV 481
R K + Q+L+ K N+A+
Sbjct: 5837 LRMPVKP*DLEPLKQHLRQKHNKAI 5911
>gb|M18269.1|STR12M S.pyogenes surface protein M type 12 (emm12) gene, 5' end
Length = 2972
Score = 45.8 bits (107), Expect = 0.024
Identities = 104/498 (20%), Positives = 213/498 (41%), Gaps = 9/498 (1%)
Frame = +2
Query: 124 LTFDEAEVR-KIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQEL 182
L D A+++ KI + K + E V ++ ++L K++ G A + +QE+
Sbjct: 1628 LGIDNADLKAKITELEKSVEEKNDVLSQIK--KELEEAEKDIQFGREVHAADLLRHKQEI 1801
Query: 183 THQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEIN 242
+E+ + +N EL P+ K+ T +N + + + + V K +A+ +
Sbjct: 1802 AEKENVISKLNG-----ELQPL---KQKVDETDRNLQQEKQKVLSLEQQLAVTKENAKKD 1957
Query: 243 EIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIRQI 302
+ L D++ A +A ++SKL AK + A + ++
Sbjct: 1958 FELAALGHQLADKEYNAK---------IAELESKLADAKKDFELAALGHQHAHNEYQAKL 2110
Query: 303 LDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQ--QVSQGL 360
++ G++ +L +E+++IL + G D A +A+ + + KA+ +V++
Sbjct: 2111 AEKDGQIKQL---EEQKQILDASRK-GTARDLEAVRQAKKATEAELNNLKAELAKVTEQK 2278
Query: 361 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQ-IRGALAEARKIA 419
+L A + AR LEA+ SK+ ++++AA L + N E + +R L +R+
Sbjct: 2279 QILDASRKGTARDLEAVRKSKK---QQVEAALKQLEEQNKISEASRKGLRRDLDTSREAK 2449
Query: 420 ELCDDPKERDDILRSLGEISALTSKLADLRRQG-KGDSPEARALAKQVATALQNLQTKTN 478
+ + K+ ++ L ++ +++D RQG + D +R KQV AL+
Sbjct: 2450 KQVE--KDLANLTAELDKVKE-EKQISDASRQGLRRDLDASREAKKQVEKALEE------ 2602
Query: 479 RAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGL----VAEGHRLANVMM 534
ANS+ A A L +E++++ + + + +A + L + LA +
Sbjct: 2603 ---ANSKLA-ALEKLNKDLEESKKLTEKEKAELQAKLEAEAKALKEQLAKQAEELAKLRA 2770
Query: 535 GPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQE 594
G K G+G++PQA +Q + +K+ K ++ T E
Sbjct: 2771 G--------KASDSQTPDAKPGNKAVPGKGQAPQAGTKPNQNKAPMKETKRQLPS--TGE 2920
Query: 595 VSDVFSDTTTPIKLLAVA 612
++ F T + ++A A
Sbjct: 2921 TANPFF-TAAALTVMAAA 2971
Score = 37.4 bits (85), Expect = 8.5
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Frame = +2
Query: 699 KNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIA- 757
K Q ++ +T +D+ + K + DAS + +++DLD + A ++ + A + A
Sbjct: 2447 KKQVEKDLANLTAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEEANSKLAAL 2626
Query: 758 RRANRILLVAKREVENSE---DPKFREAVKAASDELSKTISPMVMDAKAVAGNISD 810
+ N+ L +K+ E + K KA ++L+K + AK AG SD
Sbjct: 2627 EKLNKDLEESKKLTEKEKAELQAKLEAEAKALKEQLAKQAEEL---AKLRAGKASD 2785
>emb|X07273.1|MAMYOBH Hamster mRNA for cardiac beta-myosin heavy chain
Length = 3030
Score = 45.4 bits (106), Expect = 0.031
Identities = 79/385 (20%), Positives = 153/385 (39%), Gaps = 47/385 (12%)
Frame = +1
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 1885 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 2058
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 2059 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 2235
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 2236 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 2415
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R + +A++ ++ Q L+ ++EN
Sbjct: 2416 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 2589
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 2590 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 2769
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDS-----PE 458
EEQ L++ RK+ D+ +ER DI S +++ L +K D+ +G + P
Sbjct: 2770 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGAKGLNEE*ILCYPT 2943
Query: 459 ARALAK--QVATALQNLQTKTNRAV 481
R K + Q+L+ K N+A+
Sbjct: 2944 LRMPVKP*DLEPLKQHLRQKHNKAI 3018
>gb|AE004993.1|AE004993 Halobacterium sp. NRC-1 section 24 of 170 of the complete genome
Length = 10286
Score = 45.4 bits (106), Expect = 0.031
Identities = 89/452 (19%), Positives = 176/452 (38%), Gaps = 39/452 (8%)
Frame = -2
Query: 110 DGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMT 169
+G ++ G ++ E R+II G+ E+ A+ + E+L + +G
Sbjct: 9421 EGYNVVMQGDVTGIINMTAGERREIIDEIAGVAEF--DAKKRDAFEELDVVEERIGEAEL 9248
Query: 170 K-------MAKMIDERQQELTHQEHRVMLVNSMNTVK----ELLPVLISAMKIFVTTKNS 218
K + ++ DER+ L +Q+ + K E +SA + + +
Sbjct: 9247 KIDEKRDRLDRLADERETALEYQDLQEEKQEYEGYAKAAELEETRADLSATRADIDEQER 9068
Query: 219 KNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLN 278
+ +G+ L R TV ++ A++ + ++ DE ++ E +K ++ ++ +
Sbjct: 9067 ELEGLTAELDERRDTVGRIEADLAALNAEIERKGEDEQLAIKREIEEIKGEVSRLEDTVA 8888
Query: 279 QAKGWLRDPSASPG-------------DAGEQAIRQI-LDEAGKVGELCAGKERREILGT 324
+ ++D A DA E IR++ + +A E+ +ERR+ L
Sbjct: 8887 ACEDRVQDADAERREAVVEIDRKRERIDALETDIREVKVQKASVTAEI---QERRDELAD 8717
Query: 325 CKMLGQMTDQVADLRARGQGSSPVAMQKAQQV----SQGLDVLTAKVENAARKL---EAM 377
+ + D D A++ A++ + D L + + + +L EA
Sbjct: 8716 IEAEIESVDTEFDELKAALADEKTALEDAKRERNDHQREQDRLLDEAKRRSEELADAEAD 8537
Query: 378 TNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKE-----RDDIL 432
++ ++DA + LAD ++ A +I ++ +D K+ ++D+
Sbjct: 8536 LEDARAELPEVDATLDELAD---------ELEKATRNREQIVDVVEDLKQEKRQRQEDLA 8384
Query: 433 RSLGEISALTSKLADLRRQG--KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAA 490
E+SA + A L Q GDS + K V T L + + + V +
Sbjct: 8383 AVEDELSAAQEEYARLEAQADQSGDS----SYGKAVTTVLNDDRDGVHGTVGQLGGVREQ 8216
Query: 491 VHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGL 522
+ R + N VDD GVGQ I L
Sbjct: 8215 YATACETAAGGR-LANVVVDDDGVGQRCIEYL 8123
>emb|X62467.1|SSPFCRV S.sp (valente) fcrV gene
Length = 2716
Score = 45.4 bits (106), Expect = 0.031
Identities = 100/506 (19%), Positives = 190/506 (36%), Gaps = 16/506 (3%)
Frame = +1
Query: 321 ILGTCKMLGQMTDQVADLRARGQGSSPV----------AMQKAQQVSQGLDVLTAKVENA 370
IL K Q ++ +L++ G A +K ++S L A+ E A
Sbjct: 514 ILENIKSSNQHKKEIGELKSANGGLKTALDDMADTLNQASRKVNELSAQNKALQAEAEAA 693
Query: 371 ARK-LEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERD 429
A+K L+A+ N + IAK LA+ N G + E I G + ++ + + ++
Sbjct: 694 AQKALDALNNKNEQIAK--------LANDNDGLK--EAIEGYVDTIQQASR--EVSAKQQ 837
Query: 430 DILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKA 489
++ + ++ A +++ DL+ Q S E L + A L+NL R + + A
Sbjct: 838 ELAAAQLQLEAKNTEIEDLKHQDNMKSEEIAKLESE-AKMLENLIGSGKRELGDLEAKLA 1014
Query: 490 AVHLE-GKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRV 548
+ + K+E + ++N L+ G R DL AK
Sbjct: 1015DANAQKAKLESEAKMLEN---------------LIGSGKRELG--------DLEAKL--- 1116
Query: 549 XXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKL 608
+ E E+ L + + DL+A++ EA + + S+ T +L
Sbjct: 1117----ADANAQKAKLESEAKMLENLIGSGKREIADLQAKLDEANADKAK-LESEATILERL 1281
Query: 609 LAVAATAPPDAPNREEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTVEGIQASVKTA 668
L + + ++ D AAN +N ++ +G++ + +
Sbjct: 1282LE---SGKRELAEQQAKLD--AANADN---------AKLTEDKQISEASRQGLRRDLNAS 1419
Query: 669 RELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEE 728
RE QV ++ +T +D+ + K + DAS +
Sbjct: 1420REAKKQVEK---------------------------DLANLTAELDKVKEDKQISDASRQ 1518
Query: 729 AIKKDLDKCKVAMANIQPQMLVAGATSIA-RRANRILLVAKREVENSE---DPKFREAVK 784
+++DLD + A ++ + A + A + N+ L +K+ E + K K
Sbjct: 1519GLRRDLDASREAKKQVEKALEEANSKLAALEKLNKELEESKKLTEKEKAELQAKLEAEAK 1698
Query: 785 AASDELSKTISPMVMDAKAVAGNISD 810
A ++L+K + AK AG SD
Sbjct: 1699ALKEKLAKQAEEL---AKLRAGKASD 1767
>emb|Z32677.1|SSMLC36 Streptococcus sp. group C (C36) MLC36 gene for plasminogen binding
protein
Length = 1362
Score = 45.4 bits (106), Expect = 0.031
Identities = 83/398 (20%), Positives = 159/398 (39%), Gaps = 26/398 (6%)
Frame = +1
Query: 216 KNSKNQGIEEALKNRNFTVEKMSAEINEI------IRVLQLTSWDEDAWASKDTEAMKRA 269
K +NQ +EE LKN+ F++ + INE+ + + + E + EA ++
Sbjct: 292 KLKENQDLEEKLKNKEFSLGEALRYINELDLKLGQLNIDNIDLKHELEQEKQKAEAYRQT 471
Query: 270 LASIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLG 329
L + +KL + K DA Q++R+ LD A +E ++ L
Sbjct: 472 LEAEKAKLEEEK--------QISDASRQSLRRDLD---------ASREAKKQLEAEYQKL 600
Query: 330 QMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKID 389
+ Q++D + A ++A++ L A+ + + + S+QS+ + +D
Sbjct: 601 EEEKQISDASRQSLRRDLDASREAKK------QLEAEYQKLEEEKQISDASRQSLRRDLD 762
Query: 390 AAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERD---------DILRSLGEISA 440
A++ + E E Q L E KI+E RD + + L ++A
Sbjct: 763 ASR----EAKKQLEAEHQ---KLEEQNKISEASRKGLRRDLDASREAKKQVEKDLANLTA 921
Query: 441 LTSK------LADLRRQG-KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHL 493
K ++D R+G + D +R KQV AL+ ANS+ A A L
Sbjct: 922 ELDKVKEEKQISDASRKGLRRDLDASREAKKQVEKALEE---------ANSKLA-ALEKL 1071
Query: 494 EGKIEQAQRWIDNPTVDDRGVGQAAIRG----LVAEGHRLANVMMGPYRQDLLAKCDRVX 549
++E++++ + + + +A + L + LA + G K
Sbjct: 1072NKELEESKKLTEKEKAELQAKLEAEAKALKEKLAKQAEELAKLRAG--------KASDSQ 1227
Query: 550 XXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARM 587
G+G++PQA +Q ++ +K+ K ++
Sbjct: 1228TPDAKPGNKVVPGKGQAPQAGTKPNQNKEPMKETKRQL 1341
>gb|AE004844.1|AE004844 Pseudomonas aeruginosa PA01, section 405 of 529 of the complete
genome
Length = 17712
Score = 45.1 bits (105), Expect = 0.041
Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 1/206 (0%)
Frame = +3
Query: 289 ASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPV 348
AS D G A+ + L + G +L +R Q +Q L R +GS P+
Sbjct: 4371 ASDNDRG--ALLEKLTDTGLYSQLSKAAYQRA--------SQADEQRKQLEQRLEGSLPL 4520
Query: 349 AMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQI 408
A +Q GL+ A +A +L+ +Q ++++ Q W + + E
Sbjct: 4521 A----EQARAGLEA--ALESHAQARLQ-----EQQALQRLEGQQQWFTEEQRLLQSCEHA 4667
Query: 409 RGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVAT 468
+G LAEAR+ + +E L L + L +L L ++ + + R +Q A
Sbjct: 4668 QGQLAEARQAWDALATERETLQWLERLAPVRGLIERLKQLEQELRHSEQQQRQRTEQQAA 4847
Query: 469 ALQNLQ-TKTNRAVANSRPAKAAVHL 493
+ LQ + A R A+A HL
Sbjct: 4848 GTERLQGLQARLQEARERQAQADNHL 4925
>dbj|AB015484.1|AB015484 Dugesia japonica mRNA for myosin heavy chain, complete cds
Length = 6029
Score = 43.9 bits (102), Expect = 0.091
Identities = 71/389 (18%), Positives = 146/389 (37%), Gaps = 42/389 (10%)
Frame = +2
Query: 128 EAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEH 187
E E+ K+ + K E E E+++ KNL K+ + IDE ++ L+ ++
Sbjct: 2975 EEEMNKMKKEKKAADELQKKTE--ESLQAEEEKVKNLNKAKAKLEQTIDEMEENLSREQ- 3145
Query: 188 RVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEI-NEIIR 246
+ + VK + + + V + +EE LK + + S++I +E
Sbjct: 3146 --KVRADVEKVKRKIETELKQTQETVDDLERVKRELEEQLKRKEMELSNASSKIEDESGL 3319
Query: 247 VLQLTSWDEDAWA-----SKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIRQ 301
V QL ++ A +D EA ++A A + +Q +G L + S + G Q
Sbjct: 3320 VAQLQKKIKELQARIQELEEDLEAERQARAKAEKSRHQLEGELEELSDRLEEQGGATSAQ 3499
Query: 302 I----------------LDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGS 345
+ L+EA + + R++ DQ+ +A+ +
Sbjct: 3500 LELNKKREAELLKLKRDLEEANMQHDQMIAQSRKKQQDVANEFSDQLDQLQKAKAKIEKE 3679
Query: 346 SPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGE 405
+ + L+ L N+ +K++ + + + K++ + D N
Sbjct: 3680 KNEMKEDLNDLQSQLEALNKAKANSDKKIKELESQNAELQGKLEELNRHINDANNTSGKN 3859
Query: 406 EQIRGALAEARKIAE----------------LCDDPKERDDILRSLGEISA----LTSKL 445
+Q+ L + AE L + + DD R+ ++S+ L + L
Sbjct: 3860 QQLNAELQARLEEAESQINQLTKVKQQMQTQLEEARQNLDDESRTKAKLSSDVRNLNADL 4039
Query: 446 ADLRRQGKGDSPEARALAKQVATALQNLQ 474
+LR + ++ L +Q+ A +Q
Sbjct: 4040 DNLREALEEENENKSDLQRQLVKAQSEMQ 4126
>gb|AC084674.1|CBRG47I21 Caenorhabditis briggsae cosmid G47I21, complete sequence
Length = 43351
Score = 43.5 bits (101), Expect = 0.12
Identities = 60/311 (19%), Positives = 135/311 (43%), Gaps = 6/311 (1%)
Frame = +2
Query: 179 QQELTHQEHRVM-LVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKM 237
+Q L +E ++ L++ M+++++ ++ ++I + + NSK Q + ++LKN +E
Sbjct: 5924 KQSLEEKEAKIQALIDEMSSLQKSTDG-VAQLRIDLESANSKTQELTDSLKNSQDVIE-- 6094
Query: 238 SAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLR--DPSASPGDAG 295
E E+I L+ T+ S+ T +L ++ S+L +A+ L + S
Sbjct: 6095 --ENTEVILKLKNTAEASQTEVSQLTV----SLQTVTSQLEEARQRLEFSEFKISSLQTE 6256
Query: 296 EQAIRQ--ILDEAGKVGELCAGKERREILGTCKM-LGQMTDQVADLRARGQGSSPVAMQK 352
+ +RQ +LD ++ +E E + ++ L + ++ +L A Q +
Sbjct: 6257 LEEVRQECLLDGESAEAKIKILEESAEDSQSIRIQLKEAETRIKELEAAKQALEEIGQDS 6436
Query: 353 AQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGAL 412
+ D K+E A R+++ + + ++ ++ D+ + EE + +
Sbjct: 6437 VTKNDDIRDQYQEKLEEAERQIQELQTALDTVKEETDSVS----------QREEVAQNKI 6586
Query: 413 AEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQN 472
E E+ E +++LRS EI + + K+ DL Q + ++ L++
Sbjct: 6587 NELEASIEVLGKAAETNEMLRS--EIDSASKKIQDLELQLDSAQKSSELSGSELEKKLES 6760
Query: 473 LQTKTNRAVAN 483
Q + +N
Sbjct: 6761 SQGAIHELKSN 6793
>gb|M20374.1|STRSMP5A S.pyogenes smp5 gene encoding serotype 5 M protein, complete cds
Length = 1547
Score = 43.5 bits (101), Expect = 0.12
Identities = 83/409 (20%), Positives = 175/409 (42%), Gaps = 8/409 (1%)
Frame = +1
Query: 215 TKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASID 274
T +++ + +E ++N + E + + ++ + L T E A ++++ ++AL +
Sbjct: 391 TLSTQKETLEREVQNTQYNNETLKIKNGDLTKELNKTR-QELANKQQESKENEKALNELL 567
Query: 275 SKLNQAKGWLRDPSASPGDAGEQ--AIRQILDEAGKVGELCAGKERREILGTCKMLGQMT 332
K ++D A + E +++ILDE K ++ +E +E +GT K + +
Sbjct: 568 EKT------VKDKIAKEQENKETIGTLKKILDETVK-DKIAKEQENKETIGTLKKI--LD 720
Query: 333 DQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARK-LEAMTNSKQSIAKKIDAA 391
+ V D A+ Q S Q++++ + K+ +A+RK L ++ + K+++A
Sbjct: 721 ETVKDKLAKEQKSKQNIGALKQELAKKDEA--NKISDASRKGLRRDLDASREAKKQLEAE 894
Query: 392 QNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQ 451
L EEQ + + A + + D +E L + + +K+++ R+
Sbjct: 895 HQKL---------EEQNKISEASRKGLRRDLDASREAKKQLEAEQQKLEEQNKISEASRK 1047
Query: 452 G-KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVD 510
G + D +R KQV AL+ ANS+ A A L ++E++++ + +
Sbjct: 1048GLRRDLDASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKKLTEKEKAE 1197
Query: 511 DRGVGQAAIRGL----VAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGES 566
+ +A + L + LA + G K G+G++
Sbjct: 1198LQAKLEAEAKALKEQLAKQAEELAKLRAG--------KASDSQTPDTKPGNKAVPGKGQA 1353
Query: 567 PQARALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
PQA +Q + +K+ K ++ T E ++ F T + ++A A A
Sbjct: 1354PQAGTKPNQNKAPMKETKRQLPS--TGETANPFF-TAAALTVMATAGVA 1491
>emb|X60098.1|SSGEMM Streptococcus sp. (group G) emm gene for M protein
Length = 1356
Score = 43.5 bits (101), Expect = 0.12
Identities = 87/411 (21%), Positives = 167/411 (40%), Gaps = 14/411 (3%)
Frame = +1
Query: 219 KNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLN 278
+N+ ++E ++ + + N +++ +++ + +A +RA +++KL
Sbjct: 244 ENEQLDELVRKEVAEYNSLLDKHNSLVKKMEVVN--------DSLQATERANELLENKLK 399
Query: 279 QAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADL 338
+ Q + Q L+E K E G+ R I LGQ+ DL
Sbjct: 400 E----------------NQDLNQDLEEKLKDKEFYLGETLRYINELDLKLGQLNIDNFDL 531
Query: 339 RARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDA---AQNWL 395
+ + QKA+ Q L+ AK+E + +A S+QS+ + +DA A+ L
Sbjct: 532 KHELEQEK----QKAEADRQTLEAEKAKLEEEKQISDA---SRQSLRRDLDASREAKKQL 690
Query: 396 ADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSK------LADLR 449
+ E ++QI A + + +L + + + + L ++A K ++D
Sbjct: 691 EADHQKLEEQKQISEASRKGLR-RDLDASREAKKQVEKDLANLTAELDKVKEEKQISDAS 867
Query: 450 RQG-KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPT 508
R+G + D +R KQV AL+ ANS+ A A L ++E++++ +
Sbjct: 868 RKGLRRDLDASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKKLTEKEK 1017
Query: 509 VDDRG----VGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEG 564
+ + V +A L + LA + G K G+G
Sbjct: 1018AELQAKLEAVAKALKEKLAKQAEELAKLRAG--------KASDSQTPEATPGNKVVPGKG 1173
Query: 565 ESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
++PQA +Q ++ +K+ K ++ T E ++ F LAV ATA
Sbjct: 1174QAPQAGTKPNQNKEPMKETKRQLPS--TGEATNPFFTAAA----LAVMATA 1308
>emb|Z32678.1|SSMLG72 Streptococcus sp. group G (G72) MLG72 gene for plasminogen binding
protein
Length = 1416
Score = 43.5 bits (101), Expect = 0.12
Identities = 86/411 (20%), Positives = 168/411 (39%), Gaps = 14/411 (3%)
Frame = +1
Query: 191 LVNSMNTVKELLPVLISAMKIF---VTTKNSKNQGIEEALKNRNFTVEKMSAEINEI-IR 246
LV M V + L A ++ + NQ +EE LK++ F + + INE+ ++
Sbjct: 262 LVKKMEVVNDSLQATERANELLENKLKENQDLNQDLEEKLKDKEFYLGETLRYINELDLK 441
Query: 247 VLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEA 306
+ QL + D + E K A D + +A+ + DA Q++R+ LD +
Sbjct: 442 LGQLNIDNIDLKHELEQEKQK---AEADRQTLEAEKAKLEEEKQISDASRQSLRRDLDAS 612
Query: 307 GKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAK 366
+ A K+ + Q++D R +S A ++ + Q L+ K
Sbjct: 613 RE-----AKKQLEAEYQKLEEEKQISDASRQSLRRDLDASREAKKQLEAEYQKLEEQN-K 774
Query: 367 VENAARK-LEAMTNSKQSIAKKIDAAQNWLADPN----GGPEGEEQIRGALAEARKIAEL 421
+ A+RK L ++ + K+++A L + N +G + A EA+K E
Sbjct: 775 ISEASRKGLRRDLDASREAKKQLEAEHQKLEEQNKISEASRKGLRRDLDASREAKKQVE- 951
Query: 422 CDDPKERDDILRSLGEISALTSKLADLRRQG-KGDSPEARALAKQVATALQNLQTKTNRA 480
K+ ++ L ++ +++D R+G + D +R KQV AL+
Sbjct: 952 ----KDLANLTAELDKVKE-EKQISDTSRKGLRRDLDASREAKKQVEKALEE-------- 1092
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGL----VAEGHRLANVMMGP 536
ANS+ A A L ++E++++ + + + +A + L + LA + G
Sbjct: 1093-ANSKLA-ALEKLNKELEESKKLTEKEKAELQAKLEAEAKALKEKLAKQAEELAKLRAGT 1266
Query: 537 YRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARM 587
+ G+G++PQA +Q ++ +K+ K ++
Sbjct: 1267ASDSQTPEA--------TPGNKVVPGKGQAPQAGTKPNQNKEPMKETKRQL 1395
>emb|X78484.1|SPFCRA78 S.pyogenes (strain M8-4025) FcrA8 gene for immunoglobulin-binding
protein
Length = 1751
Score = 43.5 bits (101), Expect = 0.12
Identities = 65/278 (23%), Positives = 121/278 (43%), Gaps = 16/278 (5%)
Frame = +3
Query: 219 KNQGIEEALKNRNFTVEKM---SAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDS 275
KNQ EAL N+N + K+ +A++ E I T + AS++ A ++ LA+ S
Sbjct: 615 KNQQALEALNNKNEQIAKLTNENAQLKEAIEGYVQTIQN----ASREMAAKQQELAAAKS 782
Query: 276 KLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQV 335
+L +AK +A A++Q +A K E+ K + E+ +LG ++
Sbjct: 783 QL-EAK-----------NAEIDALKQ--QDASKTEEI--AKLQSEVATLENLLGSAKREL 914
Query: 336 ADLRARGQGSSPVAMQKAQQVS----------QGLDVLTAKVENAARKLEAMTNSKQSIA 385
DL+A+ ++ + QV+ + L L AK++ A + E + + ++
Sbjct: 915 TDLQAKLDTATAEKAKLESQVTTLENLLGSAKRELTDLQAKLDAANAEKEKLQSQAAALE 1094
Query: 386 KKIDAAQNWLADPNGGPEGEEQIRGAL-AEARKIAELCDDPKERDDILRSLGEISALTSK 444
K+++A + LAD Q + L AEA+ + E +++ +
Sbjct: 1095KQLEATKKELADLQAKLAATNQEKEKLEAEAKALKE----------------QLAKQAEE 1226
Query: 445 LADLR--RQGKGDSPEARALAKQVATALQNLQTKTNRA 480
LA L+ + P+ + K+V T +T TN+A
Sbjct: 1227LAKLKADKASGAQKPDTKPGNKEVPTRPSQTRTNTNKA 1340
>gb|BC004165.1|BC004165 Homo sapiens, Similar to nuclear mitotic apparatus protein 1, clone
MGC:2672 IMAGE:2819239, mRNA, complete cds
Length = 3810
Score = 43.5 bits (101), Expect = 0.12
Identities = 47/196 (23%), Positives = 89/196 (44%), Gaps = 10/196 (5%)
Frame = +2
Query: 320 EILGTCKML----GQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLE 375
E L C+ L QM ++ L S + A + Q D L E ++ +
Sbjct: 1061 ETLKQCQDLKTEKSQMDRKINQLSEENGDLSFKLREFASHLQQLQDALNELTEEHSKATQ 1240
Query: 376 AMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARK-IAELCDDP-KERDDILR 433
+ + K++ AA L D E E ++G L++ + +++L D+P +E+ ++L
Sbjct: 1241 EWLEKQAQLEKELSAA---LQDKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLG 1411
Query: 434 SLGEISALTSKLADLRRQGKGDSPEARALAKQVATA---LQNLQTKTNRAVAN-SRPAKA 489
+ ++ L+ KLAD + K + +A+ Q + Q LQ + N A S+ +A
Sbjct: 1412 DVLQVEELSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQAQLNELQAQLSQKEQA 1591
Query: 490 AVHLEGKIEQAQRWID 505
A H + ++E+A+ D
Sbjct: 1592 AEHYKLQMEKAKTHYD 1639
>ref|XM_033374.1| Homo sapiens myosin, heavy polypeptide 7, cardiac muscle, beta
(MYH7), mRNA
Length = 5999
Score = 43.1 bits (100), Expect = 0.15
Identities = 71/349 (20%), Positives = 139/349 (39%), Gaps = 40/349 (11%)
Frame = +3
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 4845 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 5018
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 5019 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 5195
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 5196 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 5375
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R + +A++ ++ Q L+ ++EN
Sbjct: 5376 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 5549
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 5550 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 5729
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG 452
EEQ L++ RK+ D+ +ER DI S +++ L +K D+ +G
Sbjct: 5730 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 5870
>ref|NM_000257.1| Homo sapiens myosin, heavy polypeptide 7, cardiac muscle, beta
(MYH7), mRNA
Length = 6008
Score = 43.1 bits (100), Expect = 0.15
Identities = 71/349 (20%), Positives = 139/349 (39%), Gaps = 40/349 (11%)
Frame = +3
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 4854 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 5027
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 5028 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 5204
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 5205 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 5384
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R + +A++ ++ Q L+ ++EN
Sbjct: 5385 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 5558
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 5559 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 5738
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG 452
EEQ L++ RK+ D+ +ER DI S +++ L +K D+ +G
Sbjct: 5739 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 5879
>gb|M58018.1|HUMBMYH7CD Homo sapiens beta-myosin heavy chain (MYH7) mRNA, complete cds
Length = 6008
Score = 43.1 bits (100), Expect = 0.15
Identities = 71/349 (20%), Positives = 139/349 (39%), Gaps = 40/349 (11%)
Frame = +3
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 4854 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 5027
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 5028 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 5204
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 5205 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 5384
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R + +A++ ++ Q L+ ++EN
Sbjct: 5385 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 5558
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 5559 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 5738
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG 452
EEQ L++ RK+ D+ +ER DI S +++ L +K D+ +G
Sbjct: 5739 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 5879
>dbj|AB053226.1|AB053226 Sus scrofa MyHC-slow mRNA for myosin heavy chain slow isoform,
complete cds
Length = 5938
Score = 43.1 bits (100), Expect = 0.15
Identities = 74/372 (19%), Positives = 147/372 (38%), Gaps = 40/372 (10%)
Frame = +3
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 4785 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 4958
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 4959 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 5135
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKV 309
E +R +++ L+Q + + + +A E+A + I D A
Sbjct: 5136 IETSERVQLLHSQNTSLINQKKKMEADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 5315
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R + +A++ ++ Q L+ ++EN
Sbjct: 5316 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 5489
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 5490 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 5669
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALA 463
EEQ L++ RK+ D+ +ER DI S +++ L +K D+ +G + L
Sbjct: 5670 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKGLNEE*ICHILI 5843
Query: 464 KQVATALQNLQT 475
+ A Q+ Q+
Sbjct: 5844 CPILRAQQSSQS 5879
>emb|X06976.1|HSMYOBH Human mRNA for cardiac beta myosin heavy chain
Length = 1747
Score = 43.1 bits (100), Expect = 0.15
Identities = 72/349 (20%), Positives = 139/349 (39%), Gaps = 40/349 (11%)
Frame = +3
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 594 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 767
Query: 203 PVLISA-------------MKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQ 249
+L +K + +N ++ L+ VE+ R L
Sbjct: 768 SLLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLADRELI 947
Query: 250 LTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKV 309
TS S++T + + +D+ L+Q + + + +A E+A + I D A
Sbjct: 948 ETSERVQLLHSQNTSLINQK-KKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 1124
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R + +A++ ++ Q L+ ++EN
Sbjct: 1125EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 1298
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 1299ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 1478
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG 452
EEQ L++ RK+ D+ +ER DI S +++ L +K D+ +G
Sbjct: 1479AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 1619
>emb|X03741.1|HSMYH2R Human cardiac mRNA for myosin heavy chain light meromyosin region
Length = 2022
Score = 43.1 bits (100), Expect = 0.15
Identities = 71/349 (20%), Positives = 139/349 (39%), Gaps = 40/349 (11%)
Frame = +1
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 868 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 1041
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 1042 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 1218
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 1219 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 1398
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R + +A++ ++ Q L+ ++EN
Sbjct: 1399 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 1572
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 1573 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 1752
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG 452
EEQ L++ RK+ D+ +ER DI S +++ L +K D+ +G
Sbjct: 1753 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 1893
>gb|M17712.1|HUMMYH Human cardiac myosin heavy chain mRNA, 3' end
Length = 1747
Score = 43.1 bits (100), Expect = 0.15
Identities = 72/349 (20%), Positives = 139/349 (39%), Gaps = 40/349 (11%)
Frame = +3
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 594 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 767
Query: 203 PVLISA-------------MKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQ 249
+L +K + +N ++ L+ VE+ R L
Sbjct: 768 SLLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLADRELI 947
Query: 250 LTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKV 309
TS S++T + + +D+ L+Q + + + +A E+A + I D A
Sbjct: 948 ETSERVQLLHSQNTSLINQK-KKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 1124
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R + +A++ ++ Q L+ ++EN
Sbjct: 1125EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 1298
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 1299ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 1478
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG 452
EEQ L++ RK+ D+ +ER DI S +++ L +K D+ +G
Sbjct: 1479AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 1619
>gb|M21665.1|HUMMYHC5 Human beta-myosin heavy chain mRNA, 3' end
Length = 1688
Score = 43.1 bits (100), Expect = 0.15
Identities = 71/349 (20%), Positives = 139/349 (39%), Gaps = 40/349 (11%)
Frame = +1
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 535 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 708
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 709 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 885
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 886 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 1065
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R + +A++ ++ Q L+ ++EN
Sbjct: 1066EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 1239
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 1240ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 1419
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG 452
EEQ L++ RK+ D+ +ER DI S +++ L +K D+ +G
Sbjct: 1420AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 1560
>dbj|AB016537.3|AB016537 Streptococcus pyogenes genes for ORF, Mga23, M23 and scpA23, complete
and partial cds
Length = 4791
Score = 42.7 bits (99), Expect = 0.20
Identities = 86/415 (20%), Positives = 166/415 (39%), Gaps = 17/415 (4%)
Frame = +2
Query: 218 SKNQGIEEALKNRNFTVE---KMSAEINEIIRVLQLTSWDE---DAWASKDTEAMKRALA 271
++ + +EE L N+N T++ + E E +R L L E + E KR
Sbjct: 3038 NEKKKLEEELANKNTTLDGALRAITEKEEKLRELDLALGKEHIDNIDLKHQLETEKREAE 3217
Query: 272 SIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGEL--CAGKERREILGTCKMLG 329
+ L K L + A+ + A+R I ++ K+ EL GKE + +
Sbjct: 3218 AQRQILENEKKKLEEELANKNTTLDGALRAITEKEEKLRELDLALGKEHIDNI------- 3376
Query: 330 QMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKID 389
+ Q+ + + + + +++ + + A + R L+A +K K+++
Sbjct: 3377 DLKHQLETEKREAEAQRQILENEKKKLEEQNKISEASRKGLRRDLDASREAK----KQLE 3544
Query: 390 AAQNWLADPN----GGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKL 445
A L + N +G + A EA+K E K+ ++ L ++ ++
Sbjct: 3545 AEHQKLEEQNKISEASRKGLRRDLDASREAKKQVE-----KDLANLTAELDKVKE-EKQI 3706
Query: 446 ADLRRQG-KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWI 504
+D RQG + D +R KQV AL+ ANS+ A A L ++E++++
Sbjct: 3707 SDASRQGLRRDLDASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKKLT 3856
Query: 505 DNPTVDDRGVGQAAIRGL----VAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXX 560
+ + + +A + L + LA + G K
Sbjct: 3857 EKEKAELQAKLEAEAKALKEQLAKQAEELAKLRAG--------KASGSQTPDAKPGNKAV 4012
Query: 561 RGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
G+G++PQA A +Q + +K+ K ++ T E ++ F T + ++A A A
Sbjct: 4013 PGKGQAPQAGAKPNQNKAPMKETKRQLPS--TGETANPFL-TAAALTVMATAGVA 4168
>gb|U02480.1|SPU02480 Streptococcus pyogenes NCTC8193 antiphagocytic M5.8193 protein
(emm5.8193) gene, partial cds, and IgG-binding protein
Enn5.8193 gene, complete cds
Length = 2633
Score = 42.7 bits (99), Expect = 0.20
Identities = 81/409 (19%), Positives = 175/409 (41%), Gaps = 6/409 (1%)
Frame = +1
Query: 213 VTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALAS 272
+T++ +++ + LK + T +S + + R +Q T ++ + K+ + K
Sbjct: 259 LTSEKKEHEAENDKLKQQRDT---LSTQKETLEREVQNTQYNNETLKIKNGDLTK----- 414
Query: 273 IDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMT 332
+LN+ + L + + E+A+ ++L++ K ++ +E +E +GT K + +
Sbjct: 415 ---ELNKTRQELANKQQESKE-NEKALNELLEKTVK-DKIAKEQENKETIGTLKKI--LD 573
Query: 333 DQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARK-LEAMTNSKQSIAKKIDAA 391
+ V D A+ Q S Q++++ + K+ +A+RK L ++ + K+++A
Sbjct: 574 ETVKDKLAKEQKSKQNIGALKQELAKKDEA--NKISDASRKGLRRDLDASREAKKQLEAE 747
Query: 392 QNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQ 451
L EEQ + + A + + D +E L + + +K+++ R+
Sbjct: 748 HQKL---------EEQNKISEASRKGLRRDLDASREAKKQLEAEHQKLEEQNKISEASRK 900
Query: 452 G-KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVD 510
G + D +R KQV AL+ ANS+ A A L ++E++++ + +
Sbjct: 901 GLRRDLDASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKKLTEKEKAE 1050
Query: 511 DRGVGQAAIRGL----VAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGES 566
+ +A + L + LA + G K G+G++
Sbjct: 1051LQAKLEAEAKALKEQLAKQAEELAKLRAG--------KASDSQTPDTKPGNKAVPGKGQA 1206
Query: 567 PQARALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
PQA +Q + +K+ K ++ T E ++ F T + ++A A A
Sbjct: 1207PQAGTKPNQNKAPMKETKRQLPS--TGETANPFF-TAAALTVMATAGVA 1344
>gb|AF229810.1|AF229810 Felis catus slow myosin heavy chain (MyHCS) mRNA, partial cds
Length = 1524
Score = 42.7 bits (99), Expect = 0.20
Identities = 80/389 (20%), Positives = 152/389 (38%), Gaps = 51/389 (13%)
Frame = +1
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 367 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKGLQ 540
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 541 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 717
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 718 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 897
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R + +A++ ++ Q L+ ++EN
Sbjct: 898 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 1071
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 1072ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 1251
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDS------- 456
EEQ L++ RK+ D+ +ER DI S +++ L +K D+ +G +
Sbjct: 1252AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKGLNEE*LCHIFL 1425
Query: 457 --PEARALAKQVA--TALQNLQTKTNRAV 481
P R L K + Q L K N+A+
Sbjct: 1426ICPVPRVLTKPPVPESI*QPLWMKQNKAI 1512
>emb|X51591.1|HSBMHCV Human beta-MHC mRNA for beta myosin heavy chain clone gtMHC-V
Length = 3570
Score = 42.7 bits (99), Expect = 0.20
Identities = 71/349 (20%), Positives = 139/349 (39%), Gaps = 40/349 (11%)
Frame = +1
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 2416 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 2589
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 2590 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLADEEL 2766
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 2767 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 2946
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R + +A++ ++ Q L+ ++EN
Sbjct: 2947 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 3120
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 3121 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 3300
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG 452
EEQ L++ RK+ D+ +ER DI S +++ L +K D+ +G
Sbjct: 3301 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 3441
>gb|M11338.1|STRM6 Streptococcus pyogenes emm6 gene coding for M6 protein
Length = 2111
Score = 42.4 bits (98), Expect = 0.26
Identities = 88/402 (21%), Positives = 177/402 (43%), Gaps = 14/402 (3%)
Frame = +3
Query: 228 KNRNFTVE--KMSAEINEIIR-----VLQLTSWDEDAWASKDTEAMKRALASIDSKLNQA 280
+N+N T E ++ AE N + +L+ +E+A A+K+ E K A+ ++ L++
Sbjct: 792 QNKNLTTENKELKAEENRLTTENKGLTKKLSEAEEEA-ANKEREN-KEAIGTLKKTLDET 965
Query: 281 KGWLRDPSASPGDAGEQ--AIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADL 338
++D A ++ E +++ LDE K ++ +E +E +GT K + + V D
Sbjct: 966 ---VKDKIAKEQESKETIGTLKKTLDETVK-DKIAKEQESKETIGTLKKT--LDETVKDK 1127
Query: 339 RARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADP 398
A+ Q S + + + + A+ + + + + A+ KQ +AKK + N +++
Sbjct: 1128 IAKEQESKETIGTLKKILDETVKDKIAREQKSKQDIGAL---KQELAKKDEG--NKVSEA 1292
Query: 399 NGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG-KGDSP 457
+ +G + A EA+K E K+ ++ L ++ +++D RQG + D
Sbjct: 1293 SR--KGLRRDLDASREAKKQVE-----KDLANLTAELDKVKE-EKQISDASRQGLRRDLD 1448
Query: 458 EARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQA 517
+R KQV AL+ ANS+ A A L ++E++++ + + + +A
Sbjct: 1449 ASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKKLTEKEKAELQAKLEA 1598
Query: 518 AIRGL----VAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALA 573
+ L + LA + G K G+G++PQA
Sbjct: 1599 EAKALKEQLAKQAEELAKLRAG--------KASDSQTPDAKPGNKVVPGKGQAPQAGTKP 1754
Query: 574 SQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
+Q + +K+ K ++ T E ++ F T + ++A A A
Sbjct: 1755 NQNKAPMKETKRQLPS--TGETANPFF-TAAALTVMATAGVA 1871
Score = 37.4 bits (85), Expect = 8.5
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Frame = +3
Query: 699 KNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIA- 757
K Q ++ +T +D+ + K + DAS + +++DLD + A ++ + A + A
Sbjct: 1338 KKQVEKDLANLTAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEEANSKLAAL 1517
Query: 758 RRANRILLVAKREVENSE---DPKFREAVKAASDELSKTISPMVMDAKAVAGNISD 810
+ N+ L +K+ E + K KA ++L+K + AK AG SD
Sbjct: 1518 EKLNKELEESKKLTEKEKAELQAKLEAEAKALKEQLAKQAEEL---AKLRAGKASD 1676
>gb|U39838.1|SPU39838 Streptococcus pyogenes M protein (emm19.1) gene, complete cds
Length = 1677
Score = 42.0 bits (97), Expect = 0.34
Identities = 95/545 (17%), Positives = 210/545 (38%), Gaps = 10/545 (1%)
Frame = +1
Query: 81 VENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKG 140
+E+ L Q L+S ++ ++ ++G L G + L + +A I +
Sbjct: 277 LESQKQALESQKQALESQKQALESQKQALEGRTQDLEGQTQDLESQKQAPESHIQALESQ 456
Query: 141 ILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVK- 199
+ + + +E+ + + K + + K + +++ L Q N+ T K
Sbjct: 457 TQDLESQTQALESQKQALESRKQ---ALEEQNKQLSTQKETLERQVQEAQHNNNELTEKL 627
Query: 200 -ELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAW 258
E L++ + TK + N+ +++ +K++ ++ I + ++L T D+ A
Sbjct: 628 DETQKKLVNKQQESEETKKTLNELLDKTVKDKLAKEQENQETIGTLKKILDETVKDKIAK 807
Query: 259 ASK---DTEAMKRAL-ASIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVG---E 311
K D A+K+ L ++ K+ + + +D A + ++ + +A + G +
Sbjct: 808 EQKSKQDIGALKKILDETVKDKIAKEQKSKQDIGALKQELAKKEEHNKISDASRKGLRRD 987
Query: 312 LCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQ-QVSQGLDVLTAKVENA 370
L A +E ++ L + +++++ +G A ++A+ QV + L LTA++
Sbjct: 988 LDASREAKKQLEAEHQKLEEQNKISEASRKGLRRDLDASREAKKQVEKDLANLTAELNKV 1167
Query: 371 ARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDD 430
+ + S+Q + + +DA++ E ++Q+ AL EA
Sbjct: 1168KEEKQTSDASRQGLRRDLDASR----------EAKKQVEKALEEANS------------- 1278
Query: 431 ILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAA 490
L + L +L + ++ + + E +A + A AL+ K +A R KA+
Sbjct: 1279---KLAALEKLNKELEESKKLTEKEKAELQAKLEAEAKALKEQLAKQAEELAKLRAGKAS 1449
Query: 491 VHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVXX 550
D+ T D + +A
Sbjct: 1450--------------DSQTPDTKPGNKAV-------------------------------- 1491
Query: 551 XXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLA 610
G+G++PQA +Q + +K+ K ++ T E ++ F T + ++A
Sbjct: 1492----------PGKGQAPQAGTKPNQNKAPMKETKRQLPS--TGEATNPFF-TAAALTVMA 1632
Query: 611 VAATA 615
A A
Sbjct: 1633TAGVA 1647
>gb|AY056464.1| Mus musculus beta myosin heavy chain mRNA, complete cds
Length = 6054
Score = 42.0 bits (97), Expect = 0.34
Identities = 70/349 (20%), Positives = 139/349 (39%), Gaps = 40/349 (11%)
Frame = +1
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L + + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 4909 HLRMVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 5082
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 5083 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 5259
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 5260 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 5439
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R + +A++ ++ Q L+ ++EN
Sbjct: 5440 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 5613
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 5614 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 5793
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG 452
EEQ L++ RK+ D+ +ER DI S +++ L +K D+ +G
Sbjct: 5794 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGAKG 5934
>emb|AJ243767.1|NCO243767 Notothenia coriiceps mRNA for fast myosin heavy chain (MyoHC-A1 gene)
Length = 5957
Score = 42.0 bits (97), Expect = 0.34
Identities = 177/1026 (17%), Positives = 389/1026 (37%), Gaps = 37/1026 (3%)
Frame = +2
Query: 59 KETVQTTEDQI-LKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILS 117
KET + ED+ + ++ K+E+ C++L + L+ V + + +
Sbjct: 2822 KETSERLEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENK---VK 2992
Query: 118 GTSDLLLTFDEAEVRKIIRVCKGILE-YLTVAEVVETMEDLVTYTKNLGPGMTKMAKMID 176
++ + + DE+ + K+ + K + E + + ++ ED V L TK+ + +D
Sbjct: 2993 NLTEEMASQDES-IAKLTKEKKALQESHQQTLDDLQAEEDKVN---TLTKAKTKLEQQVD 3160
Query: 177 ERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTV-- 234
+ + L ++ + + ++ ++L L A + + +N K Q +E +K ++F
Sbjct: 3161 DLEGSL--EQEKKLRMDLERAKRKLEGDLKLAQESVMDLENDKQQS-DEKIKKKDFECSQ 3331
Query: 235 --------EKMSAEINEIIRVLQ--LTSWDEDAWASKDTEA--------MKRALASIDSK 276
+ + A++ + I+ LQ + +E+ A + A + R L I +
Sbjct: 3332 LLSKIEDEQSLGAQLQKKIKELQARIEELEEEIEAERAARAKVEKQRADLSRELEEISER 3511
Query: 277 LNQAKGWL--RDPSASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQ 334
L +A G + + +A Q +R+ L+E+ E A R++ + LG+ D
Sbjct: 3512 LEEAGGATSAQIEMSKKREAEFQKLRRDLEESTLQHEATAAALRKKQADSVADLGEQIDN 3691
Query: 335 VADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNW 394
+ ++ + + ++ + +D L++ +EN A+ +K ++ K ++
Sbjct: 3692 LQRVKQKLE-------KEKSEYKMEIDDLSSNMENVAK-------AKGNLEKMCRTLEDQ 3829
Query: 395 LADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKG 454
L++ + +E +R + + A L E + R + E AL S+L +GK
Sbjct: 3830 LSELK--TKNDENVRQINDTSSQKARLLT---ENGEYSRQIEEKEALVSQLT----RGK- 3979
Query: 455 DSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVH----LEGKIEQAQRWIDNPTVD 510
+A +Q+ ++++ + A + ++A H L + E+ Q
Sbjct: 3980 -----QASTQQIEELKRHIEEEVKAKNALAHGLQSARHDCDLLREQFEEEQE-------- 4120
Query: 511 DRGVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQAR 570
+A ++ +++ + Y D + + + + E +
Sbjct: 4121 ----AKAELQRGMSKANSEVAQWRSKYETDAIQRTEELEESKKKLAQRLQEAEEQIEAVN 4288
Query: 571 ALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERA 630
+ + L+ + ++ + EV D+ D + A+AA N ++V E
Sbjct: 4289 SKCASLE--------KTKQRLLSEVEDLMIDVE---RANALAANLDKKQRNFDKVLAEWK 4435
Query: 631 ANFENHSXXXXXXXXXXXXXXXXXXSTVEGIQASVKTARELTPQVVSAARILLRNPGNQA 690
+E + +EG Q K AR L+ ++ ++N +
Sbjct: 4436 QKYEEGQ------------------AELEGAQ---KEARSLSTELFK-----MKN-SYEE 4534
Query: 691 AYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLV 750
A +H ETMK + + ++++ L ++ +T + E++ KK L+ K IQ +
Sbjct: 4535 ALDHLETMKRENKNLQQEISDLTEQIGETGKSIHELEKS-KKQLETEK---TEIQTALEE 4702
Query: 751 AGATSIARRANRILLV--AKREVENSEDPKFREAVKAASDELSKTISPMVMDAKAVAGNI 808
A T + ++IL V +++ D K E K E K S V+D+
Sbjct: 4703 AEGT-LEHEESKILRVQLELNQIKGEVDRKLAE--KDEEMEQIKRNSQRVIDS------- 4852
Query: 809 SDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXX 868
+S LDS R ++++ ++ +L
Sbjct: 4853 -----MQSTLDSEVRSRNDALRIKK-------------------KMEGDL---------- 4930
Query: 869 XXXXXXXXXXXXXXXXXXXQKAGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMAL 928
QK + + A L D R +R L
Sbjct: 4931 --NEMEIQLSHANRQASESQKQLRNVQAQLKDAQLHLDDALRAQEDFKEQAAMVERRNGL 5104
Query: 929 LMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQC-TDKRIRTNLLQVCER 987
+MAE+ L T+R+ +++ AS+ V L + T K++ T+L+Q+
Sbjct: 5105 MMAEIEELRAALEQTERSRKIAEQELVDASERVGLLHSQNTNLVNTKKKLETDLVQIQGE 5284
Query: 988 IPTISTQLKIL------STVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREA 1041
+ I + + + A M+ ++++ E + N + ++ ++ + EA
Sbjct: 5285 VDDIVQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEVAVKDLQHRLDEA 5464
Query: 1042 EAASIK 1047
E ++K
Sbjct: 5465 ENLAMK 5482
>gb|U75316.1|SSU75316 Sus scrofa beta-myosin heavy chain mRNA, complete cds
Length = 5996
Score = 42.0 bits (97), Expect = 0.34
Identities = 70/349 (20%), Positives = 139/349 (39%), Gaps = 40/349 (11%)
Frame = +1
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 4840 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 5013
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 5014 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 5190
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKV 309
E +R +++ L+Q + + + +A E+A + I D A
Sbjct: 5191 IETSERVQLLHSQNTSLINQKKKMEADLSQLQTEVEEAVQESRNAEEKAKKAITDAAMMA 5370
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R + +A++ ++ Q L+ ++EN
Sbjct: 5371 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 5544
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 5545 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYNRQAEE 5724
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG 452
EEQ L++ RK+ D+ +ER DI S +++ L +K D+ +G
Sbjct: 5725 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 5865
>emb|X81475.1|MHLMP M.hominis lmp1 and lmp2 genes
Length = 7196
Score = 42.0 bits (97), Expect = 0.34
Identities = 120/649 (18%), Positives = 230/649 (34%), Gaps = 43/649 (6%)
Frame = +3
Query: 169 TKMAKMIDER---QQELTHQEHRVMLVN---------SMNTVKELLPVLISAM-KIFVTT 215
T AK+ D+ QQ T E V N SM + K L ++ + K T
Sbjct: 2208 TLSAKLTDKDNTIQQAKTELEKEVQKANQAIKSNNTASMQSAKSSLDAKVAEITKKLETF 2387
Query: 216 KNSKNQGIEEALKNRN-----FTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRAL 270
K E + RN K + +E+I QLTS D+ S + K +
Sbjct: 2388 NKDKEAKFNELKQTRNQIQEFINTNKNNPNYSELIS--QLTS-KRDSKNSVTDSSNKSDI 2558
Query: 271 ASIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCAG-KERREILGTCKMLG 329
S +++L QA + + Q+ + L A ++ + K
Sbjct: 2559 ESANTELKQALAKANADKVQADNLAKSIKEQLNNSVSNANTLSAKLTDKDNTIQQAKT-- 2732
Query: 330 QMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKID 389
++ +V + ++ +MQ A+ L AKV +KLE K++ ++
Sbjct: 2733 ELEKEVQKANQAIKSNNTASMQSAKSS------LDAKVAEITKKLETFNKDKEAKFNELK 2894
Query: 390 AAQNWLAD---PNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLA 446
+N + + N ++ L R D + D I + ++L
Sbjct: 2895 QTRNQIQEFINTNKNNPNYSELISQLTSKRDSKNSVTDSSNKSD-------IESANTELK 3053
Query: 447 DLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVA-----NSRPAKAAVHLEGKIEQAQ 501
+ D +A LAK + L N + N A ++ +A LE ++++A
Sbjct: 3054 QALAKANADKVQADNLAKSIKEQLNNSVSNANTLSAKLTDKDNTIQQAKTELEKEVQKAN 3233
Query: 502 RWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXR 561
+ I + ++++ VAE + + +D AK + +
Sbjct: 3234 QAIKSNNTASMQSAKSSLDAKVAE----ITKKLETFNKDKEAKFNELKQTRNQIQEFINT 3401
Query: 562 GEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPN 621
+ +P L SQL S +D K + ++ + SD+ S T + LA A A N
Sbjct: 3402 NK-NNPNYSELISQL-TSKRDSKNSVTDSSNK--SDIESANTELKQALAKANADKVQADN 3569
Query: 622 REEVFDERAANFENHSXXXXXXXXXXXXXXXXXXSTVE------------GIQASVKTAR 669
+ E+ N +++ + +E AS+++A+
Sbjct: 3570 LAKSIKEQLNNSVSNANTLSAKLTDKDNTIQQAKTELEKEVQKANQAIKSNNTASMQSAK 3749
Query: 670 ELTPQVVS--AARILLRNPGNQAAYEHFETMKNQWID--NVEKMTGLVDEAIDTKSLLDA 725
V+ ++ N +A + + +NQ + N K E I +
Sbjct: 3750 SSLDAKVAEITKKLETFNKDKEAKFNELKQTRNQIQEFINTNKNNPNYSELISQLTSKRD 3929
Query: 726 SEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
S+ ++ +K + AN + + +A A + +A+ + K ++ NS
Sbjct: 3930 SKNSVTDSSNKSDIESANTELKQALAKANADKVQADNLAKSIKEQLNNS 4076
Score = 39.7 bits (91), Expect = 1.7
Identities = 118/636 (18%), Positives = 242/636 (37%), Gaps = 52/636 (8%)
Frame = +3
Query: 191 LVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEA--------------LKNRNFTVEK 236
+VN +N E VL ++KI S+ + IEE +KN+ E
Sbjct: 360 IVNEINVFHEQ-EVLQGSLKI---NNKSETKAIEEETLRLKDAITLLISKIKNQINQKEL 527
Query: 237 MSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGE 296
A+ NEI LQ + ++ + ++ E +K+ +I+++LN+ + +
Sbjct: 528 EFAKFNEIKDKLQ--EYIKNELSKQEYEHIKQ---NIENELNKYTPISLESTLIEIQNAT 692
Query: 297 QAIRQILDEAGK----VGELCAGKERREILGTC-KMLGQMTDQVADLRARGQGSSPVAMQ 351
+ ++L+E+ K + L A ++ + + ++L Q++D +++ A+ + S ++
Sbjct: 693 NNLIKLLNESTKEKDNIDNLNAKEQLKASISQANQLLPQLSDNDSEI-AKAKKSLDAEIK 869
Query: 352 KAQQ---------VSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLAD---PN 399
A Q + L AKV +KLE K++ ++ +N + + N
Sbjct: 870 NANQAVASNNTASMQSAKSSLDAKVAEITKKLETFNKDKEAKFNELKQTRNQIQEFINTN 1049
Query: 400 GGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEA 459
++ L R D + D I + ++L + D +A
Sbjct: 1050KNNPNYSELISQLTSKRDSKNSVTDSSNKSD-------IESANTELKQALAKANADKVQA 1208
Query: 460 RALAKQVATALQNLQTKTNRAVA-----NSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGV 514
LAK + L N + N A ++ +A LE ++++A + I +
Sbjct: 1209DNLAKSIKEQLNNSVSNANTLSAKLTDKDNTIQQAKTELEKEVQKADQAIKSNNTASMQS 1388
Query: 515 GQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALAS 574
++++ VAE + + +D AK + + + +P L S
Sbjct: 1389AKSSLDAKVAE----ITKKLETFNKDKEAKFNELKQTRNQIQEFINTNK-NNPNYSELIS 1553
Query: 575 QLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFE 634
QL S +D K + ++ + SD+ S T + LA A A N + E+ N
Sbjct: 1554QL-TSKRDSKNSVTDSSNK--SDIESANTELKQALAKANADKVQADNLAKSIKEQLNNSV 1724
Query: 635 NHSXXXXXXXXXXXXXXXXXXSTVE------------GIQASVKTARE-LTPQVVSAARI 681
+++ + +E AS+++A+ L +V +
Sbjct: 1725SNANTLSAKLTDKDNTIQQAKTELEKEVQKADQAIKSNNTASMQSAKS*LDAKVAEITKK 1904
Query: 682 L-LRNPGNQAAYEHFETMKNQWID--NVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCK 738
L N +A + + +NQ + N K E I + S+ ++ +K
Sbjct: 1905LETFNKDKEAKFNELKQTRNQIQEFINTNKNNPNYSELISQLTSKRDSKNSVTDSSNKSD 2084
Query: 739 VAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ AN + + +A A + +A+ + K ++ NS
Sbjct: 2085IESANTELKQALAKANADKVQADNLAKSIKEQLNNS 2192
>dbj|AK055751.1|AK055751 Homo sapiens cDNA FLJ31189 fis, clone KIDNE2000383, moderately
similar to ALPHA-1 CATENIN
Length = 2044
Score = 42.0 bits (97), Expect = 0.34
Identities = 32/102 (31%), Positives = 47/102 (45%), Gaps = 9/102 (8%)
Frame = +3
Query: 971 QCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---TMLGRTNISDEESEQATEMLVHNA 1027
QC D + +LL +RI QL I S VKA + G +S +S + L+ A
Sbjct: 675 QCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMS---LIQAA 845
Query: 1028 QNLMQSVKETVREAEAASIKIRTDAGF------TLRWVRKTP 1063
+NLM +V +TV+ + AS K + G + W K P
Sbjct: 846 KNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSWKMKAP 971
>gb|J04669.1|TCSTROP Nematode muscle tropomyosin mRNA, complete cds
Length = 1503
Score = 42.0 bits (97), Expect = 0.34
Identities = 45/238 (18%), Positives = 99/238 (40%), Gaps = 5/238 (2%)
Frame = +2
Query: 364 TAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCD 423
TAK++ +K++AM K + + DAA EE++R + ++ E
Sbjct: 299 TAKMDAIKKKMQAMKIEKDNALDRADAA-------------EEKVRQITEKLERVEEELR 439
Query: 424 DPKER-----DDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTN 478
D +++ +D+ ++ +++A TS+L + ++ + E AL +++ + L+
Sbjct: 440 DTQKKMMQTENDLDKAQEDLAAATSQLEEKEKKVQEAEAEVAALNRRMTLLEEELERAEE 619
Query: 479 RAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYR 538
R + + A H + E+ ++ ++N + D I + E LA Y
Sbjct: 620 RLKIATEKLEEATHNVDESERVRKVMENGSFQDEERAN-TIEAQLKEAQMLAEEADRKY- 793
Query: 539 QDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVS 596
++ K V GE + + + ++LK L+ ++A+ +E S
Sbjct: 794 DEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDS 967
>gb|AF324061.1|AF324061 Streptococcus pyogenes IgG Fc receptor (mrpST4547) and M ST4547
protein (emmST4547) genes, complete cds
Length = 3120
Score = 41.6 bits (96), Expect = 0.45
Identities = 59/268 (22%), Positives = 112/268 (41%), Gaps = 6/268 (2%)
Frame = +1
Query: 219 KNQGIEEALKNRNFTVEKM---SAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDS 275
KNQ EAL N+N + K+ +A++ E I T + AS++ A ++ LA+ S
Sbjct: 391 KNQQALEALNNKNEQIAKLTNENAQLKEAIEGYVQTIQN----ASREIAAKQQELAAAKS 558
Query: 276 KLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQV 335
+L + + E+ I ++ EA + L G +RE+ L T +
Sbjct: 559 QLEAKNAEIEALNQQDASKTEE-IAKLQSEAATLENL-LGSAKRELTDLQAKLDTATAEK 732
Query: 336 ADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWL 395
A L + + ++++ L AK++ A + E + + ++ K+++A + L
Sbjct: 733 AKLELQVTTLENLLGSAKRELTD----LQAKLDAANAEKEKLQSQAAALEKQLEATKKEL 900
Query: 396 ADPNGGPEGEEQIRGAL-AEARKIAELCDDPKERDDILRSLGEISALTSKLADLR--RQG 452
AD Q + L AEA+ + E +++ +LA L+ +
Sbjct: 901 ADLQAKLAATNQEKEKLEAEAKALKE----------------QLAKQAEELAKLKADKAS 1032
Query: 453 KGDSPEARALAKQVATALQNLQTKTNRA 480
P+ + K+V T +T TN+A
Sbjct: 1033GAQKPDTKPGNKEVPTRPSQTRTNTNKA 1116
>emb|X91846.1|SSMYHCC Sus scrofa mRNA for cardiac myosin heavy chain (pAZMY7)
Length = 937
Score = 41.6 bits (96), Expect = 0.45
Identities = 64/300 (21%), Positives = 121/300 (40%), Gaps = 3/300 (1%)
Frame = +3
Query: 179 QQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMS 238
+QEL RV L++S NT LI+ K + +EEA++ EK
Sbjct: 111 EQELIETSERVQLLHSQNTS------LINQKKKMEADLSQLQTEVEEAVQECRNAEEKAK 272
Query: 239 AEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQA 298
I + + + ++D S E MK+ + EQ
Sbjct: 273 KAITDAAMMAEELKKEQDT--SAHLERMKKNM-------------------------EQT 371
Query: 299 IRQI---LDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQ 355
I+ + LDEA ++ L GK++ + K+ ++ + +L A Q + +++ ++
Sbjct: 372 IKDLQHRLDEAEQIA-LKGGKKQLQ-----KLEARVRELENELEAE-QKRNAESVKGMRK 530
Query: 356 VSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEA 415
+ + LT + E + L + + + K+ A + E EEQ L++
Sbjct: 531 SERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQ------AEEAEEQANTNLSKF 692
Query: 416 RKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQT 475
RK+ D+ +ER DI S +++ L +K D+ +G + L + A Q+ Q+
Sbjct: 693 RKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKGLNEE*ICHILICPILRAQQSSQS 866
>dbj|D38541.1|CELTMY1C Caenorhabditis elegans mRNA tmy-1 for tropomyosin isoform CeTMII,
complete cds
Length = 1468
Score = 41.2 bits (95), Expect = 0.59
Identities = 44/236 (18%), Positives = 97/236 (40%), Gaps = 5/236 (2%)
Frame = +2
Query: 366 KVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDP 425
K++ +K++AM K + + DAA EE++R + ++ E D
Sbjct: 62 KMDAIKKKMQAMKIEKDNALDRADAA-------------EEKVRQITEKLERVEEELRDT 202
Query: 426 KER-----DDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
+++ DD+ ++ ++SA TSKL + + + E +L +++ + L+ R
Sbjct: 203 QKKMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERL 382
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
+ + A H + E+ ++ ++N ++ D + + E LA Y +
Sbjct: 383 KIATEKLEEATHNVDESERVRKVMENRSLQDEERAN-TVEAQLKEAQLLAEEADRKY-DE 556
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVS 596
+ K V GE + + + ++LK L+ ++A+ +E S
Sbjct: 557 VARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDS 724
>dbj|D38540.1|CELTMY1B Caenorhabditis elegans tmy-1 mRNA for tropomyosin isoform CeTMI,
complete cds
Length = 1264
Score = 41.2 bits (95), Expect = 0.59
Identities = 44/236 (18%), Positives = 97/236 (40%), Gaps = 5/236 (2%)
Frame = +2
Query: 366 KVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDP 425
K++ +K++AM K + + DAA EE++R + ++ E D
Sbjct: 62 KMDAIKKKMQAMKIEKDNALDRADAA-------------EEKVRQITEKLERVEEELRDT 202
Query: 426 KER-----DDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
+++ DD+ ++ ++SA TSKL + + + E +L +++ + L+ R
Sbjct: 203 QKKMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERL 382
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
+ + A H + E+ ++ ++N ++ D + + E LA Y +
Sbjct: 383 KIATEKLEEATHNVDESERVRKVMENRSLQDEERAN-TVEAQLKEAQLLAEEADRKY-DE 556
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVS 596
+ K V GE + + + ++LK L+ ++A+ +E S
Sbjct: 557 VARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDS 724
>dbj|AB032020.1|AB032020 Seriola dumerilii mRNA for myosin heavy chain, complete cds
Length = 6045
Score = 40.8 bits (94), Expect = 0.77
Identities = 97/486 (19%), Positives = 186/486 (37%), Gaps = 45/486 (9%)
Frame = +3
Query: 18 QQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDMPPA 77
+ + HL M E + + I DLT + ++ L + K+TV+T + +I + + A
Sbjct: 4563 EALDHLETMKRENKNLQQEISDLTEQIGETGKSIHELEKA-KKTVETEKTEI-QSALEEA 4736
Query: 78 FIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRV 137
+E+ K+++ L + G D L + E+ +I R
Sbjct: 4737 EGTLEHEEAKILRVQLELNQ------------------VKGEVDRKLAEKDEEMEQIKRN 4862
Query: 138 CKGILEYL--TVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSM 195
+ +++ + T+ V + D + K + + +M + ++ E + L N
Sbjct: 4863 SQRVMDSMQSTLDAEVRSRNDALRVKKKMEGDLNEMEIQLSHANRQAA--EAQKQLRNVQ 5036
Query: 196 NTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEK----MSAEINEIIRVLQLT 251
+K+ L L A++ +E +K + VE+ M AEI E+ L+ T
Sbjct: 5037 GQLKDALLHLDDAVRG------------QEDMKEQVVMVERRNGLMVAEIEELRVALEQT 5180
Query: 252 SWDEDAWASKDTEAMKRA-------------LASIDSKLNQAKGWLRDPSASPGDAGEQA 298
+ +A +R ++S L Q + + D +A E+A
Sbjct: 5181 ERGRKVAEQELVDASERVGLLHSQNTSLLNTKKKLESDLVQVQSEVDDSIQEARNAEEKA 5360
Query: 299 IRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQ 358
+ I D A EL ++ L K ++T V DL+ R + +AM+ ++ Q
Sbjct: 5361 KKAITDAAMMAEELKKEQDTSAHLERMKKNLEVT--VKDLQHRLDEAENLAMKGGKKQLQ 5534
Query: 359 GLDVLTAKVENAA------------------RKLEAMTNSKQSIAKKIDAAQNWL----- 395
L+ ++E R+++ +T + K + Q+ +
Sbjct: 5535 KLESRVRELEAEVDAEQRRGSDAVKGVRKYERRVKELTYQTEEDKKNVHRLQDLVDKLQL 5714
Query: 396 ---ADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG 452
A E EEQ L+ RK+ ++ +ER DI S +++ L +K D G
Sbjct: 5715 KVKAYKRQAEESEEQANTHLSRLRKVQHEMEEAQERADIAES--QVNKLRAKSRD---TG 5879
Query: 453 KGDSPE 458
K +S E
Sbjct: 5880 KSESAE 5897
>emb|X95601.1|MHLMP34GN M.hominis lmp3 and lmp4 genes
Length = 6797
Score = 40.8 bits (94), Expect = 0.77
Identities = 127/704 (18%), Positives = 255/704 (36%), Gaps = 56/704 (7%)
Frame = +1
Query: 127 DEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNL----GPGMTKMAKMIDERQQEL 182
D ++ +K + + I + L + ++ +T E+L K L +K+ +E++QEL
Sbjct: 1360 DSSDAKKALNENQ-IDDSLPIDKIKKTNENLENAKKELLNKINAERELQSKIFNEKKQEL 1536
Query: 183 THQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEIN 242
V + KE+ K+F+ T ++ IE+ +KN+ VEK ++ +
Sbjct: 1537 KR-------VLDLEDTKEV--DFTKEQKVFIETNINETSSIED-IKNKIIEVEKATSSLT 1686
Query: 243 EIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAK----------------GWLRD 286
I + E KD + I++KLN AK G ++
Sbjct: 1687 SKILNTKQQELQEFENIKKDLQDF------INTKLNDAKYQSIKQKALDKINSLNGINKN 1848
Query: 287 PSASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTC--------KMLGQMTDQVADL 338
+ AG+ A+ + +EAG E G+ ++ L K+L ++ DL
Sbjct: 1849 STIKEIKAGQNALIKAKEEAGLEKEKLDGQNIKDTLKETINNAKEFKKLLIDNDQKIVDL 2028
Query: 339 RARGQGSSPVAMQKAQQVSQGL----DVLTAKVENAARKLEAMTNSKQSIAKKIDAA--- 391
++ A Q + + + D+L K+ L K++ +++
Sbjct: 2029 KSNLDNEISKAEQSLSKDKESMESANDLLNTKLIEYKEILNKFNQEKEAKFNELEQTRKN 2208
Query: 392 -QNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRR 450
+N+L D + L A+ + + + DI+ + AL LAD +
Sbjct: 2209 IENFLTDEVKNNPNYATLVKDLTNAKDAKKSVTNSSNKSDIIAA---NEALIQALADANK 2379
Query: 451 QGKGDSPEARALAKQVATALQNLQTKTNRAVA-----NSRPAKAAVHLEGKIEQAQRWID 505
K EA K + L L K N + +S KA L +I A + ++
Sbjct: 2380 -AKDQVDEAN---KSIKEQLNALIDKANTLLPQLNDNDSEIVKAKESLNAEITNANKAVN 2547
Query: 506 NPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGE 565
+D Q+A L + ++ N + + +D AK +
Sbjct: 2548 Q---NDNASMQSAKSSLDDKVTKIQN-QLTEFNKDKDAKFKELEQTRKDIDNFLTDDVKN 2715
Query: 566 SPQARALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEV 625
+P L L ++ D K+ + + E+ + + VA +A + +
Sbjct: 2716 NPNYATLVKDLTNAKDDKKSVTKSSNKSEIIAANDELKQALDKAKVAKDQIDEA--NKSI 2889
Query: 626 FDERAANFENHSXXXXXXXXXXXXXXXXXXSTVEGIQASVKTARELTPQVVSAARILLRN 685
++ + + N + + IQ++ + P + +A+ L
Sbjct: 2890 KEQLSDSITNANQLLNKLVDSDKDIQKAKTELSQEIQSASQELNLNNPTSMQSAKESLDA 3069
Query: 686 PGNQAA--YEHFETMKNQWIDNVEKMTGLVDEAIDT-------KSLLDA------SEEAI 730
+ E F K+ +EK +DE I+T +L+ S+ ++
Sbjct: 3070 KVTEITKKLETFNKDKDVKFKELEKTRKDIDEFINTNKTNPNYSTLISELTSKRDSKNSV 3249
Query: 731 KKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+K + AN + + +A A + +A+ + K ++ NS
Sbjct: 3250 TNSSNKSDIETANTELKQALAKANTDKAQADNLAKSTKEQLNNS 3381
Score = 37.4 bits (85), Expect = 8.5
Identities = 76/408 (18%), Positives = 154/408 (37%), Gaps = 20/408 (4%)
Frame = +1
Query: 115 ILSGTSDLLLTFDEAEVRK--IIRVCKGILEYLT--VAEVVETMEDLVTYTKNLGPGMTK 170
I++ +L D+A+V K I K I E L+ + + + LV K++ T+
Sbjct: 2803 IIAANDELKQALDKAKVAKDQIDEANKSIKEQLSDSITNANQLLNKLVDSDKDIQKAKTE 2982
Query: 171 MAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISA----MKIFVTTKNSKNQGIEEA 226
+++ I QEL SM + KE L ++ ++ F K+ K + +E+
Sbjct: 2983 LSQEIQSASQELNLNNP-----TSMQSAKESLDAKVTEITKKLETFNKDKDVKFKELEKT 3147
Query: 227 LKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRD 286
K+ + + N + +LTS D+ S + K + + +++L QA
Sbjct: 3148 RKDIDEFINTNKTNPNYSTLISELTS-KRDSKNSVTNSSNKSDIETANTELKQALAKANT 3324
Query: 287 PSASPGDAGEQAIRQILDEAGKVGELCAG-KERREILGTCKMLGQMTDQVADLRARGQGS 345
A + + Q+ + L A ++ + K ++ +V +
Sbjct: 3325 DKAQADNLAKSTKEQLNNSISSANTLLAKLTDKDNTIQQAKT--ELEKEVQKANQAVASN 3498
Query: 346 SPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQ----NWLADPNGG 401
+ +MQ A+ L AKV +KLE K K+++ + ++
Sbjct: 3499 NTASMQSAKSS------LDAKVTEITKKLETFNKDKDVKFKELEQTRKDIDEFINTNKTN 3660
Query: 402 PEGEEQIRGALAEARKIAELCDDPKERDDILRS--LGEISALTSKLADLRRQGKGDSPEA 459
P+ + I+EL ++ I S +I ++L + D +A
Sbjct: 3661 PD----------YSTLISELTSKRDSKNSITNSSNKSDIETANTELKQALAKANTDKDQA 3810
Query: 460 RALAKQVATALQNLQTKTNRAVA-----NSRPAKAAVHLEGKIEQAQR 502
LA+ L + N +A ++ +A LE ++++A +
Sbjct: 3811 DNLARSTKEQLNKSISSANTLLAKLTDKDNTIQQAKTELEKEVQKANQ 3954
>emb|X60097.1|SSCEMM Streptococcus sp. (group C) emm gene for M protein
Length = 1629
Score = 40.8 bits (94), Expect = 0.77
Identities = 89/406 (21%), Positives = 164/406 (39%), Gaps = 6/406 (1%)
Frame = +1
Query: 216 KNSKNQGIEEALKNRNFTVEKMSAEINEI-IRVLQLTSWDEDAWASKDTEAMKRALASID 274
K +NQ +EE LK++ F + + INE+ +++ QL + D + E K A D
Sbjct: 571 KLKENQDLEEKLKDKEFYLGETLRYINELDLKLGQLNIDNIDLKHELEQEKQK---AEAD 741
Query: 275 SKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQ 334
+ +A+ + DA Q++R+ LD A +E ++ L + Q
Sbjct: 742 RQTLEAEKAKLEEEKQISDASRQSLRRDLD---------ASREAKKQLEAEYQKLEEEKQ 894
Query: 335 VADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNW 394
++D + + +++ + L+ K+E + EA S++ + + +DA++
Sbjct: 895 ISDASRQSLRRD---LDASREAKKQLEAEYQKLEEQNKISEA---SRKGLRRDLDASR-- 1050
Query: 395 LADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG-K 453
E ++Q+ LA AEL D KE I +D R+G +
Sbjct: 1051--------EAKKQVEKDLANLT--AEL-DKVKEEKQI--------------SDASRKGLR 1155
Query: 454 GDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRG 513
D +R KQV AL+ ANS+ A A L ++E++++ + + +
Sbjct: 1156RDLDASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKKLTEKEKAELQA 1305
Query: 514 VGQAAIRGL----VAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQA 569
+A + L + LA + G K G+G++PQA
Sbjct: 1306KLEAEAKALKEKLAKQAEELAKLRAG--------KASDSQTPEATPGNKVVPGKGQAPQA 1461
Query: 570 RALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
+Q ++ +K+ K ++ T E ++ F LAV ATA
Sbjct: 1462GTKPNQNKEPMKETKRQLPS--TGEATNPFFTAAA----LAVMATA 1581
>gb|AF097904.1|AF097904 Rana catesbeiana myosin heavy chain (MHC-1) mRNA, partial cds
Length = 2772
Score = 40.4 bits (93), Expect = 1.0
Identities = 62/281 (22%), Positives = 116/281 (41%), Gaps = 3/281 (1%)
Frame = +2
Query: 179 QQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMS 238
+QEL RV L++S NT LI++ K + + +EEA++ EK
Sbjct: 1928 EQELLDASERVQLLHSQNTS------LINSKKKLESDMSQLQNEVEEAVQEARNAEEKAK 2089
Query: 239 AEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQA 298
I + + + ++D S E MK+ L EQ
Sbjct: 2090 KAITDASMMAEELKKEQDT--SAHLERMKKNL-------------------------EQT 2188
Query: 299 IRQI---LDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQ 355
++ + LDEA ++ + GK++ + K+ ++ D +L A Q A++ ++
Sbjct: 2189 VKDLQHRLDEAEQLA-MKGGKKQLQ-----KLESRVRDVENELDAE-QKRGTEAIKGVRK 2347
Query: 356 VSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEA 415
+ + LT + E + + + + + K+ A + E EEQ LA
Sbjct: 2348 YERRVKELTYQSEEDKKNVLRLQDLVDKLQLKVKAYKRQ------AEESEEQANAHLARF 2509
Query: 416 RKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDS 456
RK+ ++ +ER DI S +++ L +K D+ + KG+S
Sbjct: 2510 RKVQHELEEAEERADIAES--QVNKLRAKSRDISGK-KGES 2623
>dbj|AB059400.1|AB059400 Bos taurus MyHC-slow mRNA for myosin heavy chain slow, complete cds
Length = 5930
Score = 40.4 bits (93), Expect = 1.0
Identities = 69/349 (19%), Positives = 139/349 (39%), Gaps = 40/349 (11%)
Frame = +3
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H + + VK L
Sbjct: 4776 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--LAAEAQKQVKSLQ 4949
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 4950 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 5126
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKV 309
E +R +++ L+Q + + + +A E+A + I D A
Sbjct: 5127 IETSERVQLLHSQNTSLINQKKKMEADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 5306
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R + +A++ ++ Q L+ ++EN
Sbjct: 5307 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 5480
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 5481 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 5660
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG 452
EEQ L++ RK+ D+ +ER DI S +++ L +K D+ +G
Sbjct: 5661 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 5801
>gb|S75411.1|S75411 vir regulon: mry15=Mry homolog...scpA15=ScpA15 [Streptococcus
pyogenes, type M15, opacity factor-positive serotype,
Genomic, 5 genes, 5299 nt]
Length = 5299
Score = 40.4 bits (93), Expect = 1.0
Identities = 58/268 (21%), Positives = 112/268 (41%), Gaps = 6/268 (2%)
Frame = +3
Query: 219 KNQGIEEALKNRNFTVEKM---SAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDS 275
KNQ EAL N+N + K+ +A++ E I T + AS++ A ++ LA+ S
Sbjct: 1203 KNQQALEALNNKNEQIAKLTNENAQLKEAIEGYAQTIQN----ASREIAAKQQELAAAKS 1370
Query: 276 KLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQV 335
+L + + E+ I ++ EA + L G +RE+ L T +
Sbjct: 1371 QLEAKNAEIEALNQQDASKTEE-IAKLQSEAATLENL-LGSAKRELTDLQAKLDTATAEK 1544
Query: 336 ADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWL 395
A L ++ + ++++ L AK++ A + + + ++ K+++A + L
Sbjct: 1545 AKLESQVTTLENLLGSAKRELTD----LQAKLDAANAEKAKLQSQAAALEKQLEATKKEL 1712
Query: 396 ADPNGGPEGEEQIRGAL-AEARKIAELCDDPKERDDILRSLGEISALTSKLADLR--RQG 452
AD Q + L AEA+ + E +++ +LA L+ +
Sbjct: 1713 ADLQAKLAATNQEKEKLEAEAKALKE----------------QLAKQAEELAKLKADKAS 1844
Query: 453 KGDSPEARALAKQVATALQNLQTKTNRA 480
P+ + K+V T +T TN+A
Sbjct: 1845 GAQKPDTKPGNKEVPTRPSQTRTNTNKA 1928
>emb|AJ319534.1|SPY319534 Streptococcus pyogenes partial emm gene for M protein, isolate
STNZ451
Length = 1042
Score = 40.4 bits (93), Expect = 1.0
Identities = 60/280 (21%), Positives = 121/280 (42%), Gaps = 7/280 (2%)
Frame = +1
Query: 148 AEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVML-VNSMNTVKELLPVLI 206
AE+ +DL L + + +++ ++E ++E ++N + ELL +
Sbjct: 226 AELKADNDDLKAEKNRLTTDNRGLTEKLEKAKEESVNKERESKENEKTLNDLNELLKKTV 405
Query: 207 SAMKIFVTTKNSKNQG-IEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEA 265
KI K+ ++ G +++ L N+ E+ +NE+++ ++ + +D A
Sbjct: 406 ED-KIAREQKSKQDIGALKQELANKQQESEENEKTLNELLKKTVEDKIAKEQKSKQDIGA 582
Query: 266 MKRALASID--SKLNQA--KGWLRDPSASPGDAGE-QAIRQILDEAGKVGELCAGKERRE 320
+K+ALA + +K++ A KG RD AS + +A Q L+E K+ E RR
Sbjct: 583 LKQALAKKEEQNKISDASRKGLRRDLDASREAKKQLEAEHQKLEEQNKISEASRKGLRR- 759
Query: 321 ILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNS 380
DL A + + + Q++ + + A + R L+A +
Sbjct: 760 ----------------DLDASREAKKQLEAEH-QKLEEQNKISEASRKGLRRDLDASREA 888
Query: 381 KQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 420
K+ + K ++ A + LA E++ L E++K+ E
Sbjct: 889 KKQVEKALEEANSKLA-------ALEKLNKELEESKKLTE 987
>dbj|AB000214.1|AB000214 Theragra chalcogramma mRNA for myosin heavy chain, partial cds
Length = 3441
Score = 39.7 bits (91), Expect = 1.7
Identities = 97/482 (20%), Positives = 185/482 (38%), Gaps = 45/482 (9%)
Frame = +3
Query: 18 QQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDMPPA 77
+ + HL M E + + I DLT + ++ L + K+ V+T + +I + + A
Sbjct: 2022 ETLDHLETMKRENKNLQQEISDLTEQIGETGKSIHELEK-SKKQVETEKTEI-QSALEEA 2195
Query: 78 FIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRV 137
+E+ +K+++ L + G D L + E+ +I R
Sbjct: 2196 EGTLEHEESKILRVQLELNQ------------------IKGEVDRKLAEKDEEMEQIKRN 2321
Query: 138 CKGILEYL--TVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSM 195
+ +++ + T+ V + D + K + + +M + ++ E + L N
Sbjct: 2322 SQRVIDSMQATLDSEVRSRNDALRIKKKMEGDLNEMEIQLSHANRQAA--EAQKQLRNVQ 2495
Query: 196 NTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEK----MSAEINEIIRVLQLT 251
+K+ L A++ E LK + VE+ M AEI E+ L+ T
Sbjct: 2496 GQLKDAQLHLDDAVRA------------AEDLKEQAAMVERRNGLMVAEIEELRAALEQT 2639
Query: 252 SWDEDAWASKDTEAMKR-------------ALASIDSKLNQAKGWLRDPSASPGDAGEQA 298
+ +A +R + ++S L Q +G + D +A E+A
Sbjct: 2640 ERGRKVAEQELVDASERVGLLHSQNTSLLNSKKKLESDLVQVQGEVDDSVQEARNAEEKA 2819
Query: 299 IRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQ 358
+ I D A EL ++ L K ++T V DL+ R + +AM+ ++ Q
Sbjct: 2820 KKAITDAAMMAEELKKEQDTSSHLERMKKNLEVT--VKDLQHRLDEAENLAMKGGKKQLQ 2993
Query: 359 GLDV----LTAKVENAARK-LEAMTNSKQSIAKKIDAAQNWLADPNGG------------ 401
L+ L ++V+N R+ EA+ ++ + + D G
Sbjct: 2994 KLEARVRDLESEVDNEQRRGAEAIKGVRKYERRVKELTYQTEEDKKNGCRLQDLVDKLQL 3173
Query: 402 ---------PEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG 452
E EEQ L++ RK+ + +ER DI + +++ L +K D G
Sbjct: 3174 KVKAYKRQSEEAEEQANSYLSKCRKVQHELEAAEERADIAET--QVNKLRAKTRD---SG 3338
Query: 453 KG 454
KG
Sbjct: 3339 KG 3344
>gb|U21963.1|MHU21963 Mycoplasma hominis Mh81 Lmp1 (lmp1) gene, complete cds
Length = 4166
Score = 39.7 bits (91), Expect = 1.7
Identities = 116/636 (18%), Positives = 241/636 (37%), Gaps = 52/636 (8%)
Frame = +3
Query: 191 LVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEA--------------LKNRNFTVEK 236
+VN +N E VL ++KI S+ + IEE +KN+ E
Sbjct: 360 IVNEINVFHEQ-EVLQGSLKI---NNKSETKAIEEETLRLKDAITLLISKIKNQINQKEL 527
Query: 237 MSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGE 296
A+ NEI LQ + ++ + ++ E +K+ +I+++LN+ + +
Sbjct: 528 EFAKFNEIKDKLQ--EYIKNELSKQEYEHIKQ---NIENELNKYTPISLESTLIEIQNAT 692
Query: 297 QAIRQILDEAGK----VGELCAGKERREILGTC-KMLGQMTDQVADLRARGQGSSPVAMQ 351
+ ++L+E+ K + L A ++ + + ++L Q++D +++ A+ + S ++
Sbjct: 693 NNLIKLLNESTKEKDNIDNLNAKEQLKASISQANQLLPQLSDNDSEI-AKAKKSLDAEIK 869
Query: 352 KAQQ---------VSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLAD---PN 399
A Q + L AKV +KLE K++ ++ +N + + N
Sbjct: 870 NANQAVASNNTASMQSAKSSLDAKVAEITKKLETFNKDKEAKFNELKQTRNQIQEFINTN 1049
Query: 400 GGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEA 459
++ L R D + D I + ++L + D +A
Sbjct: 1050KNNPNYSELISQLTSKRDSKNSVTDSSNKSD-------IESANTELKQALAKANADKVQA 1208
Query: 460 RALAKQVATALQNLQTKTNRAVA-----NSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGV 514
LAK + L N + N A ++ +A LE ++++A + I +
Sbjct: 1209DNLAKSIKEQLNNSVSNANTLSAKLTDKDNTIQQAKTELEKEVQKADQAIKSNNTASMQS 1388
Query: 515 GQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALAS 574
++++ VAE + + +D AK + + + +P L S
Sbjct: 1389AKSSLDAKVAE----ITKKLETFNKDKEAKFNELKQTRNQIQEFINTNK-NNPNYSELIS 1553
Query: 575 QLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFE 634
QL S +D K + ++ + SD+ S T + LA A A N + E+ N
Sbjct: 1554QL-TSKRDSKNSVTDSSNK--SDIESANTELKQALAKANADKVQADNLAKSIKEQLNNSV 1724
Query: 635 NHSXXXXXXXXXXXXXXXXXXSTVE------------GIQASVKTARELTPQVVS--AAR 680
+++ + +E AS+++A+ V+ +
Sbjct: 1725SNANTLSAKLTDKDNTIQQAKTELEKEVQKANQAIKSNNTASMQSAKSSLDAKVAEITKK 1904
Query: 681 ILLRNPGNQAAYEHFETMKNQWID--NVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCK 738
+ N +A + + +NQ + N K E I + S+ ++ +K
Sbjct: 1905LETFNKDKEAKFNELKQTRNQIQEFINTNKNNPNYSELISQLTSKRDSKNSVTDSSNKSD 2084
Query: 739 VAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ AN + + +A A + +A+ + K ++ NS
Sbjct: 2085IESANTELKQALAKANADKVQADNLAKSIKEQLNNS 2192
>ref|NM_073088.1| Caenorhabditis elegans
Length = 3888
Score = 39.7 bits (91), Expect = 1.7
Identities = 80/384 (20%), Positives = 166/384 (42%), Gaps = 21/384 (5%)
Frame = +1
Query: 139 KGILEYLTVAEVV--ETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVML-VNSM 195
+ + E L A+++ E +++L + GM ++ K ++ + ++ +E ++ V+
Sbjct: 2683 ENVKEELIGAKIMNKEMVDELNAKLGDALEGMEELKKSLEVSEAKVQRREEELIAQVSKH 2862
Query: 196 NTVKELLPVLISAMKIFV-TTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTS-- 252
+E L + + +K +T+ S++Q E A + +E++ A I+ + LQ
Sbjct: 2863 RDQQEQLQLTLDELKSAQHSTETSRSQSNELAAR-----IEELEASISFAQKALQDVEDV 3027
Query: 253 -WDEDAWASKDTEAMKRAL-------ASIDSKLNQAKGWLRDPSASPGDAGEQAIRQILD 304
+D S+ EAM + S+ ++ NQ ++ Q ++I+
Sbjct: 3028 KHQQDIQISEANEAMVKLKQDFETERTSLQNEFNQTVSADKEQLGHAEQMIAQKEKEIIT 3207
Query: 305 EAGKVGELCAG-KERREILGTCKM----LGQMTDQVADLRARGQGSSPVAMQKAQQVSQG 359
++ + +ER E K +G +T+ ++ L+ V +Q+ +
Sbjct: 3208 LQARIEAMSQQFEERLEASNVWKTQAMNVGTLTESLSQLQ--------VQLQQMNEKLVA 3363
Query: 360 LDVLTAKVENAARK-LEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKI 418
D +VE A+ + + K + ++ A + +A E EEQ+ A E ++
Sbjct: 3364 SDKYAVEVEQQAQHDITVIQEEKNEQSAALEEALSKIA------ELEEQLGRAQKEIVRL 3525
Query: 419 AELCDDPKERDDILRSLGE-ISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKT 477
++CDD DD+ R L + IS L S++ L+ G P+ L +Q ++ L
Sbjct: 3526 EKVCDD---FDDVERELKDAISKLQSEIKQLK--GIKKPPKVMGLLQQARLGVKPL---- 3678
Query: 478 NRAVANSRPAKAAVHLEGKIEQAQ 501
+R +++ P + V E K E AQ
Sbjct: 3679 SREHSHAEPPEPVV--EDKFEDAQ 3744
>gb|J00752.1|RATMYHCB Rat cardiac myosin heavy chain insert 5, mRNA
Length = 1346
Score = 39.7 bits (91), Expect = 1.7
Identities = 62/279 (22%), Positives = 113/279 (40%), Gaps = 5/279 (1%)
Frame = +1
Query: 179 QQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMS 238
+QEL RV L++S NT LI+ K + +EEA++ EK
Sbjct: 538 EQELIETSERVQLLHSQNTS------LINQKKKMHADLSQLQTEVEEAVQECRNAEEKAK 699
Query: 239 AEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQA 298
I + + + ++D S E MK+ + EQ
Sbjct: 700 KAITDAAMMAEELKKEQDT--SAHLERMKKNM-------------------------EQT 798
Query: 299 IRQI---LDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRA--RGQGSSPVAMQKA 353
I+ + LDEA ++ L GK++ + K+ ++ + +L A + S M+K+
Sbjct: 799 IKDLQHRLDEAEQIA-LKGGKKQLQ-----KLEARVRELENELEAEQKRNAESVKGMRKS 960
Query: 354 QQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALA 413
++ + L+ T + + +L+ + + Q K A E EEQ L+
Sbjct: 961 ERRIKELNYQTEEDKKNLLRLQDLVDKLQLKVK---------AYKRQAEEAEEQANTNLS 1113
Query: 414 EARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG 452
+ RK+ D+ +ER DI S +++ L +K D+ +G
Sbjct: 1114KFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGAKG 1224
>gb|U21962.1|MHU21962 Mycoplasma hominis Mh56 Lmp1 (lmp1) gene, complete cds
Length = 4370
Score = 39.7 bits (91), Expect = 1.7
Identities = 116/636 (18%), Positives = 241/636 (37%), Gaps = 52/636 (8%)
Frame = +3
Query: 191 LVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEA--------------LKNRNFTVEK 236
+VN +N E VL ++KI S+ + IEE +KN+ E
Sbjct: 360 IVNEINVFHEQ-EVLQGSLKI---NNKSETKAIEEETLRLKDAITLLISKIKNQINQKEL 527
Query: 237 MSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGE 296
A+ NEI LQ + ++ + ++ E +K+ +I+++LN+ + +
Sbjct: 528 EFAKFNEIKDKLQ--EYIKNELSKQEYEHIKQ---NIENELNKYTPISLESTLIEIQNAT 692
Query: 297 QAIRQILDEAGK----VGELCAGKERREILGTC-KMLGQMTDQVADLRARGQGSSPVAMQ 351
+ ++L+E+ K + L A ++ + + ++L Q++D +++ A+ + S ++
Sbjct: 693 NNLIKLLNESTKEKDNIDNLNAKEQLKASISQANQLLPQLSDNDSEI-AKAKKSLDAEIK 869
Query: 352 KAQQ---------VSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLAD---PN 399
A Q + L AKV +KLE K++ ++ +N + + N
Sbjct: 870 NANQAVASNNTASMQSAKSSLDAKVAEITKKLETFNKDKEAKFNELKQTRNQIQEFINTN 1049
Query: 400 GGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEA 459
++ L R D + D I + ++L + D +A
Sbjct: 1050KNNPNYSELISQLTSKRDSKNSVTDSSNKSD-------IESANTELKQALAKANADKVQA 1208
Query: 460 RALAKQVATALQNLQTKTNRAVA-----NSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGV 514
LAK + L N + N A ++ +A LE ++++A + I +
Sbjct: 1209DNLAKSIKEQLNNSVSNANTLSAKLTDKDNTIQQAKTELEKEVQKADQAIKSNNTASMQS 1388
Query: 515 GQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALAS 574
++++ VAE + + +D AK + + + +P L S
Sbjct: 1389AKSSLDAKVAE----ITKKLETFNKDKEAKFNELKQTRNQIQEFINTNK-NNPNYSELIS 1553
Query: 575 QLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFE 634
QL S +D K + ++ + SD+ S T + LA A A N + E+ N
Sbjct: 1554QL-TSKRDSKNSVTDSSNK--SDIESANTELKQALAKANADKVQADNLAKSIKEQLNNSV 1724
Query: 635 NHSXXXXXXXXXXXXXXXXXXSTVE------------GIQASVKTARELTPQVVS--AAR 680
+++ + +E AS+++A+ V+ +
Sbjct: 1725SNANTLSAKLTDKDNTIQQAKTELEKEVQKADQAIKSNNTASMQSAKSSLDAKVAEITKK 1904
Query: 681 ILLRNPGNQAAYEHFETMKNQWID--NVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCK 738
+ N +A + + +NQ + N K E I + S+ ++ +K
Sbjct: 1905LETFNKDKEAKFNELKQTRNQIQEFINTNKNNPNYSELISQLTSKRDSKNSVTDSSNKSD 2084
Query: 739 VAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ AN + + +A A + +A+ + K ++ NS
Sbjct: 2085IESANTELKQALAKANADKVQADNLAKSIKEQLNNS 2192
>ref|NM_061137.1| Caenorhabditis elegans
Length = 855
Score = 39.7 bits (91), Expect = 1.7
Identities = 43/230 (18%), Positives = 94/230 (40%), Gaps = 5/230 (2%)
Frame = +1
Query: 372 RKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKER--- 428
+K++AM K + + DAA EE++R + ++ E D +++
Sbjct: 16 KKMQAMKIEKDNALDRADAA-------------EEKVRQITEKLERVEEELRDTQKKMTQ 156
Query: 429 --DDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVANSRP 486
DD+ ++ ++SA TSKL + + + E +L +++ + L+ R +
Sbjct: 157 TGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEK 336
Query: 487 AKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCD 546
+ A H + E+ ++ ++N ++ D + + E LA Y ++ K
Sbjct: 337 LEEATHNVDESERVRKVMENRSLQDEERAN-TVEAQLKEAQLLAEEADRKY-DEVARKLA 510
Query: 547 RVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVS 596
V GE + + + ++LK L+ ++A+ +E S
Sbjct: 511 MVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDS 660
>ref|NM_061136.1| Caenorhabditis elegans
Length = 855
Score = 39.7 bits (91), Expect = 1.7
Identities = 43/230 (18%), Positives = 94/230 (40%), Gaps = 5/230 (2%)
Frame = +1
Query: 372 RKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKER--- 428
+K++AM K + + DAA EE++R + ++ E D +++
Sbjct: 16 KKMQAMKIEKDNALDRADAA-------------EEKVRQITEKLERVEEELRDTQKKMTQ 156
Query: 429 --DDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVANSRP 486
DD+ ++ ++SA TSKL + + + E +L +++ + L+ R +
Sbjct: 157 TGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEK 336
Query: 487 AKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCD 546
+ A H + E+ ++ ++N ++ D + + E LA Y ++ K
Sbjct: 337 LEEATHNVDESERVRKVMENRSLQDEERAN-TVEAQLKEAQLLAEEADRKY-DEVARKLA 510
Query: 547 RVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVS 596
V GE + + + ++LK L+ ++A+ +E S
Sbjct: 511 MVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDS 660
>gb|M19932.1|BABBMYHA Baboon beta-myosin heavy-chain mRNA, partial cds
Length = 881
Score = 39.7 bits (91), Expect = 1.7
Identities = 60/277 (21%), Positives = 113/277 (40%), Gaps = 3/277 (1%)
Frame = +1
Query: 179 QQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMS 238
+QEL RV L++S NT LI+ K + +EEA++ EK
Sbjct: 34 EQELIETSERVQLLHSQNTS------LINQKKKMDADLSQLQTEVEEAVQECRNAEEKAK 195
Query: 239 AEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQA 298
I + + + ++D S E MK+ + EQ
Sbjct: 196 KAITDAAMMAEELKKEQDT--SAHLERMKKNM-------------------------EQT 294
Query: 299 IRQI---LDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQ 355
I+ + LDEA ++ L GK++ + K+ ++ + +L A Q + +++ ++
Sbjct: 295 IKDLQHRLDEAEQIA-LKGGKKQLQ-----KLEARVRELENELEAE-QKRNAESVKGMRK 453
Query: 356 VSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEA 415
+ + LT + E + L + + + K+ A + E EEQ L++
Sbjct: 454 SERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQ------AEEAEEQANTNLSKF 615
Query: 416 RKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG 452
RK+ D+ +ER DI S +++ L +K D+ +G
Sbjct: 616 RKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 720
>emb|X60959.1|SPEMM57 S.pyogenes emm57 gene for M57 protein
Length = 1515
Score = 39.7 bits (91), Expect = 1.7
Identities = 89/429 (20%), Positives = 171/429 (39%), Gaps = 37/429 (8%)
Frame = +1
Query: 223 IEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKG 282
++E +K ++ T+EK + N+++ DE A K E+ L +S++++
Sbjct: 352 LDEIIKKQSETIEKEVEDYNKLV--------DEKASLDKKIESANSQLEFKNSQISELVA 507
Query: 283 W-------LRDPSASPGDAGEQAI-------RQILDEAGKVGEL--CAGKERREILGTCK 326
+ S A EQ+ +QI D GK EL K + +
Sbjct: 508 QAANLNEQIEKLSEEKNKAEEQSNEQLEFKNQQIADLIGKKAELEMKLAKAEEDRATYNR 687
Query: 327 MLGQMTDQVADLRAR-GQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIA 385
++ ++ +L+A+ + +A Q+AQ LD A++ ++ + S+Q +
Sbjct: 688 VIEGAKRELTELQAKLDETKQELANQQAQ-----LDAYKAEIAKLIQENKISEASRQGLR 852
Query: 386 KKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERD---------DILRSLG 436
+ +DA++ + E E Q L E KI+E RD + + L
Sbjct: 853 RDLDASR----EAKKQLEAEHQ---KLEEQNKISEASRQGLRRDLDASREAKKQVEKDLA 1011
Query: 437 EISALTSK------LADLRRQG-KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKA 489
++A K ++D RQG + D +R KQV AL+ ANS+ A A
Sbjct: 1012NLTAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEE---------ANSKLA-A 1161
Query: 490 AVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGL----VAEGHRLANVMMGPYRQDLLAKC 545
L ++E++++ + + + +A + L + LA + G K
Sbjct: 1162LEKLNKELEESKKLTEKEKAELQAKLEAEAKALKEQLAKQAEELAKLRAG--------KA 1317
Query: 546 DRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTP 605
G+G++PQA +Q + +K+ K ++ T E ++ F T
Sbjct: 1318SDSQTPDTKPGNKAVPGKGQAPQAGTKPNQNKAPMKETKRQLPS--TGETANPFF-TAAA 1488
Query: 606 IKLLAVAAT 614
+ ++A A +
Sbjct: 1489LTVMATAGS 1515
Score = 37.4 bits (85), Expect = 8.5
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Frame = +1
Query: 699 KNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIA- 757
K Q ++ +T +D+ + K + DAS + +++DLD + A ++ + A + A
Sbjct: 985 KKQVEKDLANLTAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEEANSKLAAL 1164
Query: 758 RRANRILLVAKREVENSE---DPKFREAVKAASDELSKTISPMVMDAKAVAGNISD 810
+ N+ L +K+ E + K KA ++L+K + AK AG SD
Sbjct: 1165 EKLNKELEESKKLTEKEKAELQAKLEAEAKALKEQLAKQAEEL---AKLRAGKASD 1323
>gb|AF006665.1|AF006665 Bacillus subtilis 168 region at 182 min containing the cge gene cluster
Length = 30100
Score = 39.3 bits (90), Expect = 2.2
Identities = 76/355 (21%), Positives = 143/355 (39%), Gaps = 17/355 (4%)
Frame = +2
Query: 87 KLVQAAQMLQSDPYSVPARDYLIDGS-RGILSGTSDLLLTF-DEAEVRKIIRVCKGILEY 144
KL +A + ++SD Y D L+DG+ +G++ D T+ D+ + + E
Sbjct: 23021 KLNKAYEQIKSDYYQKTDDDKLVDGAIKGMIQSLDDPYSTYMDQEQAKSFDETISASFEG 23200
Query: 145 LTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPV 204
+ A+V E +++ + G K I R Q + V +N V +
Sbjct: 23201 IG-AQVEEKDGEILIVSPIKGSPAEKAG--IKPRDQIIKVNGKSVKGMNVNEAVALIRGK 23371
Query: 205 LISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEI-IRVLQLTSWDEDAWASKDT 263
+ +K+ + N I+ ++K VE + +E+ + I +Q+TS+ E
Sbjct: 23372 KGTKVKLELNRAGVGN--IDLSIKRDTIPVETVYSEMKDNNIGEIQITSFSETT-----A 23530
Query: 264 EAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQA-------------IRQILDEAGKVG 310
+ + A+ S++ K AKG++ D +PG EQA I Q+ + G
Sbjct: 23531 KELTDAIDSLEKK--GAKGYILDLRGNPGGLMEQAITMSNLFIDKGKNIMQVEYKNGSKE 23704
Query: 311 ELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQ-GLDVLTAKVEN 369
+ A KER+ T ++ T A++ A A+ ++ V G
Sbjct: 23705 VMKAEKERKVTKPTVVLVNDGTASAAEIMA-------AALHESSNVPLIGETTFGKGTVQ 23863
Query: 370 AARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDD 424
A++ + + K ++AK + A W+ P Q++ L + K+ L D
Sbjct: 23864 TAKEYDDGSTVKLTVAKWLTADGEWIHKKGIKP----QVKAELPDYAKLPYLDAD 24016
>gb|AE006012.1|AE006012 Caulobacter crescentus section 338 of 359 of the complete genome
Length = 10208
Score = 39.3 bits (90), Expect = 2.2
Identities = 66/270 (24%), Positives = 104/270 (38%), Gaps = 55/270 (20%)
Frame = +1
Query: 292 GDAGEQ----AIRQILDEAGK--------VGELCA-GKERREILGTCKMLGQMT----DQ 334
G GEQ A++++LD AG V E+ + G+ RR I+ + T Q
Sbjct: 3829 GSQGEQHPQGAMKRLLDRAGVSRAEVRAWVPEVDSRGRWRRRIVNEALRPAEATADWLSQ 4008
Query: 335 VADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAAR---------------KLEAMTN 379
+A LRA G PVA + G V+ A+ E A + A+
Sbjct: 4009 IAALRAEAPGLDPVA-----EGLTGFSVIAARAEEEAAGACALLLREALEDPVRTAALVT 4173
Query: 380 SKQSIAKKI-DAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRS---- 434
Q++A+++ Q W P+ G+ A +A L ++P +L
Sbjct: 4174 PDQTLARRVMTRLQRWGVIPDSSAGAPLAAAGSAILALHLARLVEEPLNPVRLLAFAKHP 4353
Query: 435 --LGEISALTSKL-------------ADLRRQGKGDSPEARALAKQVATALQNLQTK--T 477
LGE + L AD+ R ++P+A ALA++V A+ +
Sbjct: 4354 LVLGEDEVPAAALLERKGLRGAAPGSADVLRARLREAPDALALAERVLVAVNHAAAPYGD 4533
Query: 478 NRAVANSRPAKAAVH-LEGKIEQAQRWIDN 506
A +R A+A V LE I + W N
Sbjct: 4534 GALAAPARAAQALVEALESLIAPDRLWAGN 4623
>gb|AC084652.1|CBRG45O11 Caenorhabditis briggsae cosmid G45O11, complete sequence
Length = 26703
Score = 39.3 bits (90), Expect = 2.2
Identities = 58/267 (21%), Positives = 109/267 (40%), Gaps = 9/267 (3%)
Frame = -1
Query: 254 DEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSA-SPGDAGEQAIRQILDEAGKVGEL 312
+ D A KD EA + A +K + +D A + +A E+A ++ ++A K E
Sbjct: 25935 EADEKAKKDLEAKTKKEADEKAKKEADEKAKKDLEAKTKKEADEKAKKEADEKAKKDLEA 25756
Query: 313 CAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKV--ENA 370
KE E + AD +A+ + + ++ + L+ T K ENA
Sbjct: 25755 KTKKEADE----------KAKKEADEKAKKDLEAKTKKEADEKAKKDLEAKTKKEADENA 25606
Query: 371 ARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDD 430
+ LEA T + K +A + D + E + K + D+ +++
Sbjct: 25605 KKNLEAKTKKEADEKAKKEADEKTKKDLEAKTKKEADEKAKKEADEKAKKEADEKAKKEA 25426
Query: 431 ILRSLGEISALTSKLADLRRQGKGDSP-----EARALAKQVATALQNLQTKTNR-AVANS 484
++ ++ A T K AD + + + D EA+ + A ++L+ KT + A N+
Sbjct: 25425 DEKAKKDLEAKTKKEADEKAKKEADEKTKKDLEAKTKKEADEKAKKDLEAKTKKEADENA 25246
Query: 485 RPAKAAVHLEGKIEQAQRWIDNPTVDD 511
+ A + E+A++ D T D
Sbjct: 25245 KKNLEAKTKKEADEKAKKEADEKTKKD 25165
>emb|Z99114.1|BSUB0011 Bacillus subtilis complete genome (section 11 of 21): from 2000171 to
2207900
Length = 207730
Score = 39.3 bits (90), Expect = 2.2
Identities = 76/355 (21%), Positives = 143/355 (39%), Gaps = 17/355 (4%)
Frame = -1
Query: 87 KLVQAAQMLQSDPYSVPARDYLIDGS-RGILSGTSDLLLTF-DEAEVRKIIRVCKGILEY 144
KL +A + ++SD Y D L+DG+ +G++ D T+ D+ + + E
Sbjct: 132241 KLNKAYEQIKSDYYQKTDDDKLVDGAIKGMIQSLDDPYSTYMDQEQAKSFDETISASFEG 132062
Query: 145 LTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPV 204
+ A+V E +++ + G K I R Q + V +N V +
Sbjct: 132061 IG-AQVEEKDGEILIVSPIKGSPAEKAG--IKPRDQIIKVNGKSVKGMNVNEAVALIRGK 131891
Query: 205 LISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEI-IRVLQLTSWDEDAWASKDT 263
+ +K+ + N I+ ++K VE + +E+ + I +Q+TS+ E
Sbjct: 131890 KGTKVKLELNRAGVGN--IDLSIKRDTIPVETVYSEMKDNNIGEIQITSFSETT-----A 131732
Query: 264 EAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQA-------------IRQILDEAGKVG 310
+ + A+ S++ K AKG++ D +PG EQA I Q+ + G
Sbjct: 131731 KELTDAIDSLEKK--GAKGYILDLRGNPGGLMEQAITMSNLFIDKGKNIMQVEYKNGSKE 131558
Query: 311 ELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQ-GLDVLTAKVEN 369
+ A KER+ T ++ T A++ A A+ ++ V G
Sbjct: 131557 VMKAEKERKVTKPTVVLVNDGTASAAEIMA-------AALHESSNVPLIGETTFGKGTVQ 131399
Query: 370 AARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDD 424
A++ + + K ++AK + A W+ P Q++ L + K+ L D
Sbjct: 131398 TAKEYDDGSTVKLTVAKWLTADGEWIHKKGIKP----QVKAELPDYAKLPYLDAD 131246
>gb|AF015775.1|AF015775 Bacillus subtilis YodA (yodA), YodB (yodB), YodC (yodC), YodD (yodD),
ABC-transporter (yodE), permease (yodF), proteinase
(ctpA), YodH (yodH), YodI (yodI), carboxypeptidase
(yodJ), purine nucleoside phosphorylase (deoD), YodL
(yodL), YodM (yodM), YodN >
Length = 29950
Score = 39.3 bits (90), Expect = 2.2
Identities = 76/355 (21%), Positives = 143/355 (39%), Gaps = 17/355 (4%)
Frame = -1
Query: 87 KLVQAAQMLQSDPYSVPARDYLIDGS-RGILSGTSDLLLTF-DEAEVRKIIRVCKGILEY 144
KL +A + ++SD Y D L+DG+ +G++ D T+ D+ + + E
Sbjct: 7111 KLNKAYEQIKSDYYQKTDDDKLVDGAIKGMIQSLDDPYSTYMDQEQAKSFDETISASFEG 6932
Query: 145 LTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPV 204
+ A+V E +++ + G K I R Q + V +N V +
Sbjct: 6931 IG-AQVEEKDGEILIVSPIKGSPAEKAG--IKPRDQIIKVNGKSVKGMNVNEAVALIRGK 6761
Query: 205 LISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEI-IRVLQLTSWDEDAWASKDT 263
+ +K+ + N I+ ++K VE + +E+ + I +Q+TS+ E
Sbjct: 6760 KGTKVKLELNRAGVGN--IDLSIKRDTIPVETVYSEMKDNNIGEIQITSFSETT-----A 6602
Query: 264 EAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQA-------------IRQILDEAGKVG 310
+ + A+ S++ K AKG++ D +PG EQA I Q+ + G
Sbjct: 6601 KELTDAIDSLEKK--GAKGYILDLRGNPGGLMEQAITMSNLFIDKGKNIMQVEYKNGSKE 6428
Query: 311 ELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQ-GLDVLTAKVEN 369
+ A KER+ T ++ T A++ A A+ ++ V G
Sbjct: 6427 VMKAEKERKVTKPTVVLVNDGTASAAEIMA-------AALHESSNVPLIGETTFGKGTVQ 6269
Query: 370 AARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDD 424
A++ + + K ++AK + A W+ P Q++ L + K+ L D
Sbjct: 6268 TAKEYDDGSTVKLTVAKWLTADGEWIHKKGIKP----QVKAELPDYAKLPYLDAD 6116
>ref|NM_017239.1| Rattus norvegicus myosin heavy chain, cardiac muscle, adult (Myh6),
mRNA
Length = 5930
Score = 38.9 bits (89), Expect = 2.9
Identities = 60/278 (21%), Positives = 113/278 (40%), Gaps = 3/278 (1%)
Frame = +2
Query: 179 QQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMS 238
+QEL RV L++S NT LI+ K + +EEA++ EK
Sbjct: 5147 EQELIETSERVQLLHSQNTS------LINQKKKMDADLSQLQTEVEEAVQECRNAEEKAK 5308
Query: 239 AEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQA 298
I + + + ++D S E MK+ + EQ
Sbjct: 5309 KAITDAAMMAEELKKEQDT--SAHLERMKKNM-------------------------EQT 5407
Query: 299 IRQI---LDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQ 355
I+ + LDEA ++ L GK++ + K+ ++ + +L A Q + +++ ++
Sbjct: 5408 IKDLQHRLDEAEQIA-LKGGKKQLQ-----KLEARVRELENELEAE-QKRNAESVKGMRK 5566
Query: 356 VSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEA 415
+ + LT + E + L + + + K+ A + E EEQ L++
Sbjct: 5567 SERRIKELTYQTEEDKKNLVRLQDLVDKLQLKVKAYKRQ------AEEAEEQANTNLSKF 5728
Query: 416 RKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGK 453
RK+ D+ +ER DI S +++ L +K D+ + K
Sbjct: 5729 RKVQHELDEAEERADIAES--QVNKLRAKSRDIGAKQK 5836
>emb|X15938.1|RNMHCA Rat mRNA for alpha cardiac myosin heavy chain
Length = 5930
Score = 38.9 bits (89), Expect = 2.9
Identities = 60/278 (21%), Positives = 113/278 (40%), Gaps = 3/278 (1%)
Frame = +2
Query: 179 QQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMS 238
+QEL RV L++S NT LI+ K + +EEA++ EK
Sbjct: 5147 EQELIETSERVQLLHSQNTS------LINQKKKMDADLSQLQTEVEEAVQECRNAEEKAK 5308
Query: 239 AEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQA 298
I + + + ++D S E MK+ + EQ
Sbjct: 5309 KAITDAAMMAEELKKEQDT--SAHLERMKKNM-------------------------EQT 5407
Query: 299 IRQI---LDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQ 355
I+ + LDEA ++ L GK++ + K+ ++ + +L A Q + +++ ++
Sbjct: 5408 IKDLQHRLDEAEQIA-LKGGKKQLQ-----KLEARVRELENELEAE-QKRNAESVKGMRK 5566
Query: 356 VSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEA 415
+ + LT + E + L + + + K+ A + E EEQ L++
Sbjct: 5567 SERRIKELTYQTEEDKKNLVRLQDLVDKLQLKVKAYKRQ------AEEAEEQANTNLSKF 5728
Query: 416 RKIAELCDDPKERDDILRSLGEISALTSKLADLRRQGK 453
RK+ D+ +ER DI S +++ L +K D+ + K
Sbjct: 5729 RKVQHELDEAEERADIAES--QVNKLRAKSRDIGAKQK 5836
>ref|XM_045378.2| Homo sapiens hypothetical protein FLJ14957 (FLJ14957), mRNA
Length = 7152
Score = 38.9 bits (89), Expect = 2.9
Identities = 65/339 (19%), Positives = 129/339 (37%), Gaps = 25/339 (7%)
Frame = +1
Query: 193 NSMNTVKELLP------VLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIR 246
NS + VK+LL + ++ ++ + + Q I+E + +E++ ++ NE +
Sbjct: 1825 NSTSEVKDLLEQKSKLTIEVAELQRQLQLEVKNQQNIKEERERMRANLEELRSQHNEKVE 2004
Query: 247 ---VLQLTSWDEDAWASKDTEAM----------KRALASIDSKLNQAKGWLRDPSASPGD 293
LQ + + K+ E + + + + +L++ L S
Sbjct: 2005 ENSTLQQRLEESEGELRKNLEELFQVKMEREQHQTEIRDLQDQLSEMHDELDSAKRSEDR 2184
Query: 294 AGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKA 353
I ++L + +L KE +E L K ++T L+ +
Sbjct: 2185 EKGALIEELLQAKQDLQDLLIAKEEQEDL-LRKRERELTALKGALKEEVSSHDQEMDKLK 2361
Query: 354 QQVSQGLDVLTAKVENAARKLEAM---TNSKQSIAKKIDAAQNWLADPNGGPEG--EEQI 408
+Q L L VE A + +E + +N+ + + L + N +G EE
Sbjct: 2362 EQYDAELQALRESVEEATKNVEVLASRSNTSEQDQAGTEMRVKLLQEENEKLQGRSEELE 2541
Query: 409 RGALAEARKIAELC-DDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVA 467
R R+I +L D+ K ++ + + GEI L L R++ K RAL ++
Sbjct: 2542 RRVAQLQRQIEDLKGDEAKAKETLKKYEGEIRQLEEALVHARKEEKEAVSARRALENELE 2721
Query: 468 TALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDN 506
A NL T S K + ++ + + ++N
Sbjct: 2722 AAQGNLSQTTQEQKQLSEKLKEESEQKEQLRRLKNEMEN 2838
>emb|Z22219.1|SPPAMPR S.pyogenes PAM protein gene
Length = 1164
Score = 38.5 bits (88), Expect = 3.8
Identities = 73/371 (19%), Positives = 150/371 (39%), Gaps = 2/371 (0%)
Frame = +1
Query: 219 KNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLN 278
+N+G++ L+ + ++ + ++ ++ +L + + E +K D K
Sbjct: 187 ENKGLKTDLREKEEELQGLKDDVEKLTADAELQRLKNERHEEAELERLKSERHDHDKKEA 366
Query: 279 QAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADL 338
+ K L D A + A+R I ++ + E A +++ + Q++D
Sbjct: 367 ERKA-LEDKLADKQEHLNGALRYINEKEAEAKEKEAEQKKLK----------EEKQISDA 513
Query: 339 RARGQGSSPVAMQKAQ-QVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLAD 397
+G A ++A+ QV + L LTA+++ + + S+Q + + +DA++
Sbjct: 514 SRQGLRRDLDASREAKKQVEKDLANLTAELDKVKEEKQISDASRQGLRRDLDASR----- 678
Query: 398 PNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG-KGDS 456
E ++Q+ LA AEL D KE I +D RQG + D
Sbjct: 679 -----EAKKQVEKGLANLT--AEL-DKVKEEKQI--------------SDASRQGLRRDL 792
Query: 457 PEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQ 516
+R KQV AL+ ANS+ A A L ++E++++ + + + +
Sbjct: 793 DASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKKLTEKEKAELQAKLE 942
Query: 517 AAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQL 576
A + L + + A + + K G+G++PQA +Q
Sbjct: 943 AEAKALKEQLAKQAEELAKLRAE----KASDSQTPDAKPGNKAVPGKGQAPQAGTKPNQN 1110
Query: 577 QDSLKDLKARM 587
+ +K+ K ++
Sbjct: 1111KAPMKETKRQL 1143
>gb|M95774.1|STRMPROTN Group G streptococci M protein gene, complete cds
Length = 2280
Score = 38.5 bits (88), Expect = 3.8
Identities = 109/519 (21%), Positives = 204/519 (39%), Gaps = 19/519 (3%)
Frame = +1
Query: 116 LSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPG-----MTK 170
++G L E E K ++ K I E T A + T D K L + +
Sbjct: 670 VTGDDSRRLFAKEIEENKELK--KQISELTTKASNLATELDNTKQDKELAKETLLYEINE 843
Query: 171 MAKMIDERQQELTHQE-HRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGI---EEA 226
K +D + L +E R L S++T K L +++ K + + E+
Sbjct: 844 KKKFVDSIAKVLEDKEVQRHNLQQSLDTAKAELDKKEQELQLVKGNLGQKEKELDQKEKE 1023
Query: 227 LKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRD 286
L+N E +++ E I + + E + + LA +++ Q K +D
Sbjct: 1024 LENEELAKESAISDLTEQINAKKA-----------EVEKLAQDLADKSAEI-QEKEAEKD 1167
Query: 287 PSASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSS 346
+A + Q ++ K + A ++ E + +LG D +A L A+ +
Sbjct: 1168 RQQHMYEA---FMSQYKEKVEKQEQELAKLKQLETINN-NLLGNAKDMIAKLSAKNE--- 1326
Query: 347 PVAMQKAQQVSQGLDVLTAKVENAARK-LEAMTNSKQSIAKKIDAAQNWLADPN----GG 401
+A KA+ Q K+ +A+R+ L N+ + K+++A L + N
Sbjct: 1327 QLASDKAKLEEQN------KISDASRQGLRRDLNASREAKKQLEAEHQKLEEQNKISEAS 1488
Query: 402 PEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG-KGDSPEAR 460
+G + A EA+K E K+ ++ L ++ +++D R+G + D +R
Sbjct: 1489 RKGLRRDLDASREAKKQVE-----KDLANLTAELDKVKE-DKQISDASRKGLRRDLEASR 1650
Query: 461 ALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIR 520
KQV AL+ ANS+ A A L ++E++++ + + + +A +
Sbjct: 1651 EAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKKLTEKEKAELQAKLEAEAK 1800
Query: 521 GL----VAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQL 576
L + LA + G K G+G++PQA +Q
Sbjct: 1801 ALKEKLAKQAEELAKLRAG--------KASDSQTPDAKPGNNVVPGKGQAPQAGTKPNQN 1956
Query: 577 QDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
++ +K+ K ++ T E ++ F LAV ATA
Sbjct: 1957 KEPMKETKRQLPS--TGEATNPFFTAAA----LAVMATA 2055
>emb|X58179.1|SPEMM52 S.pyogenes for emm52 gene
Length = 1372
Score = 38.5 bits (88), Expect = 3.8
Identities = 86/403 (21%), Positives = 167/403 (41%), Gaps = 5/403 (1%)
Frame = +3
Query: 218 SKNQGIEEALKNRNFTVEKMSAEI---NEIIRVLQLTSWDEDAWASKDTEAMKRALASID 274
S+N+ ++ L+ RN ++ ++ ++ N+ + + +L + + E +K D
Sbjct: 267 SENEELKADLQKRNKKLKNLNDDVKKLNDEVALERLKNERHVHDEEVELERLKNERHDHD 446
Query: 275 SKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQ 334
K + K L D A + + A+R I ++ ER+E K L + Q
Sbjct: 447 KKEAERKA-LEDKLADKQEHLDGALRYINEKEA---------ERKEKEAEQKKLKE-EKQ 593
Query: 335 VADLRARGQGSSPVAMQKAQ-QVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQN 393
++D +G A ++A+ QV + L LTA+++ + + S+Q + + +DA++
Sbjct: 594 ISDASRQGLRRDLDASREAKKQVEKDLANLTAELDKVKEEKQISDASRQGLRRDLDASR- 770
Query: 394 WLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG- 452
E ++Q+ LA AEL D KE I +D RQG
Sbjct: 771 ---------EAKKQVEKDLANLT--AEL-DKVKEEKQI--------------SDASRQGL 872
Query: 453 KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDR 512
+ D +R KQV AL+ ANS+ A A L ++E++++ + + +
Sbjct: 873 RRDLDASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKKLTEKEKAELQ 1022
Query: 513 GVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARAL 572
+A + L + + A + + K G+G++PQA
Sbjct: 1023AKLEAEAKALKEKLAKQAEELAKLRAE----KASDSQTPDAKPGNKAVPGKGQAPQAGTK 1190
Query: 573 ASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
+Q + +K+ K ++ T E ++ F T + ++A A A
Sbjct: 1191PNQNKAPMKETKRQLPS--TGEAANPFF-TAAALTVMATAGVA 1310
>emb|X72932.1|SPEMMFCR S.pyogenes genes for Fcr protein and M protein
Length = 3162
Score = 38.5 bits (88), Expect = 3.8
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Frame = +1
Query: 674 QVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKD 733
Q++ A+R LR N + K Q ++ +T +D+ + K + DAS + +++D
Sbjct: 2539 QILRASRQGLRRDLNAS-----REAKKQVEKDLANLTAELDKVKEEKQISDASRQGLRRD 2703
Query: 734 LDKCKVAMANIQPQMLVAGATSIA-RRANRILLVAKREVENSE---DPKFREAVKAASDE 789
LD + A ++ + A A + N++L +K+E + + K KA ++
Sbjct: 2704 LDASREAKKQVEKALEEANRKLAALEKLNKVLGESKKETQKEKAELQAKLEAEAKALKEQ 2883
Query: 790 LSKTISPMVMDAKAVAGNISD 810
L+K + AK A SD
Sbjct: 2884 LAKQAEEL---AKLRAEKASD 2937
>emb|X69325.1|MVATI Mousepox virus ATI gene for A-type inclusion protein
Length = 3410
Score = 38.1 bits (87), Expect = 5.0
Identities = 55/271 (20%), Positives = 115/271 (42%), Gaps = 28/271 (10%)
Frame = +2
Query: 259 ASKDTEAMKRALASIDSKL--NQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCAGK 316
A D ++ ALA D +L N+ WL G+ GE+ R++ + K+ ++ G
Sbjct: 1373 ADNDITIVRSALAIADYQLVINKLTEWLDKCEEECGNGGEEFTRELEEAKKKLNDMNKGL 1552
Query: 317 E---------RREILGTCKMLGQMTDQVADLRARGQGS------SPVAMQKAQQVSQGLD 361
R+ + + + Q+T+++ +LR G GS + + + +++ + LD
Sbjct: 1553 SDKLGKIRTLERDSVYKNERIEQLTNEIKELRDMGGGSNNCSGLAEIDKKTIKELRESLD 1732
Query: 362 VLTAKVENAARKLEAMTNSK--QSIAKKIDAAQNWLADPNGGPEGE-EQIRGA---LAEA 415
++L+ + N K S ++++ ++ WL + E ++ R A L+
Sbjct: 1733 REREMRAELEKELDTIRNGKVDGSSQRELELSRMWLKQRDEDLRVEIDKRRDAERELSRL 1912
Query: 416 RKIAELCDDPKERDD-----ILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATAL 470
R+ C+ KE D I+ +++L S++A R + S R L +
Sbjct: 1913 RRDITECNQYKEDLDKANITIMTYTNRVTSLESEIA---RYQQNLSVAHRELEDERRNT- 2080
Query: 471 QNLQTKTNRAVANSRPAKAAVHLEGKIEQAQ 501
++L+ K N + N + L +I+ +
Sbjct: 2081 RDLENKLNECMRNQENTQEVEALRSRIKDLE 2173
>dbj|AP001508.1|AP001508 Bacillus halodurans genomic DNA, section 2/14
Length = 296950
Score = 38.1 bits (87), Expect = 5.0
Identities = 38/194 (19%), Positives = 87/194 (44%), Gaps = 5/194 (2%)
Frame = -3
Query: 263 TEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCAGKERREIL 322
T MK+ L + + L A D + + D + + + ++ E R ++
Sbjct: 153353 TRRMKKRLTVVTAALEAAGNG--DFTTAIKDTNGDELSVVAESYNRMAEKLQDTLHR-MV 153183
Query: 323 GTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQ 382
+ + ++Q+ + ++ + QQV++G + +A VE+A++ LEAM S
Sbjct: 153182 DSANQVASSSEQLTASAEQTSQATETITEAIQQVAEGSEKASASVEDASQSLEAMAMSVH 153003
Query: 383 SIAKKIDAAQNWLADPNG-GPEGEEQIRGALAEARKIAELCDDPKERDDILRSLG----E 437
+I++ + + + G +GE ++ + ++I + +E ++++SL E
Sbjct: 153002 AISENANGISDISSQAIGKAKDGEVLVQQTV---KQIQAINRSVEESGEVIKSLDTRSKE 152832
Query: 438 ISALTSKLADLRRQ 451
I +TS +A + Q
Sbjct: 152831 IGNITSVIASISEQ 152790
>gb|AC008067.3|AC008067 Homo sapiens BAC clone RP11-303I4 from 2, complete sequence
Length = 151242
Score = 37.7 bits (86), Expect = 6.5
Identities = 17/37 (45%), Positives = 22/37 (58%)
Frame = +1
Query: 904 QLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGG 940
+L E KW GNDII AK+M ++M EM+ R G
Sbjct: 12382 KLDAEVAKWDDSGNDIIVLAKQMCMIMMEMTDFTR*G 12492
>emb|AJ243770.1|PFO243770 Paracirrhites forsteri mRNA for fast myosin heavy chain (MyoHC-T54
gene)
Length = 5997
Score = 37.7 bits (86), Expect = 6.5
Identities = 92/486 (18%), Positives = 189/486 (37%), Gaps = 45/486 (9%)
Frame = +1
Query: 18 QQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDMPPA 77
+ + HL M E + + I DLT + ++ L + K+TV+T + +I + + A
Sbjct: 4558 EALDHLETMKRENKNLQQEISDLTEQIGETGKSIHELEKA-KKTVETEKTEI-QSALEEA 4731
Query: 78 FIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRV 137
+E+ K+++ L + G D + + E+ +I R
Sbjct: 4732 EGTLEHEEAKILRVQLELNQ------------------IKGEVDRKMAEKDEEMEQIKRN 4857
Query: 138 CKGILEYL--TVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSM 195
+ +++ + T+ V + D + K + + +M + ++ + E + L N
Sbjct: 4858 SQRVIDSMQSTLDSEVRSRNDALRVKKKMEGDLNEMEIQLSHANRQAS--EAQKQLRNVQ 5031
Query: 196 NTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEK----MSAEINEIIRVLQLT 251
+K+ L A++ +E +K + VE+ M AEI+E+ L+ T
Sbjct: 5032 GQLKDAQLHLDDAVRG------------QEDMKEQVAMVERRNGLMMAEIDELRVALEQT 5175
Query: 252 SWDEDAWASKDTEAMKRA-------------LASIDSKLNQAKGWLRDPSASPGDAGEQA 298
+ +A +R +++ L Q +G + D +A ++A
Sbjct: 5176 ERGRKVAEQELVDASERVGLLHSQNTSLMNTKKKLEADLVQVQGEVDDTVQEARNAEDKA 5355
Query: 299 IRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQ 358
+ I D A EL ++ L K ++T V DL+ R + +AM+ ++ Q
Sbjct: 5356 KKAITDAAMMAEELKKEQDTSAHLERMKKNLEVT--VKDLQHRLDEAENLAMKGGKKQLQ 5529
Query: 359 GLDVLTAKVENAA------------------RKLEAMTNSKQSIAKKIDAAQNWL----- 395
L+ ++E+ R+++ +T + K ++ Q+ +
Sbjct: 5530 KLESRVRELESEVEAEQRRGADAVKGVRKYERRVKELTYQTEEDKKNVNRLQDLVDKLQL 5709
Query: 396 ---ADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKLADLRRQG 452
+ E EEQ ++ RK+ ++ +ER DI S +++ L +K R G
Sbjct: 5710 KVKSYKRQSEEAEEQANTHMSRLRKVQHELEEAQERADIAES--QVNKLRAK---SRETG 5874
Query: 453 KGDSPE 458
K D E
Sbjct: 5875 KTDLAE 5892
>emb|AL662833.4| Human DNA sequence from clone XXbac-101P6 on chromosome 6, complete
sequence [Homo sapiens]
Length = 168887
Score = 37.4 bits (85), Expect = 8.5
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = +3
Query: 289 ASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQG 344
ASP G ++RQ GK EL RREILG C M + T+++A+ G G
Sbjct: 19518 ASPRPGGSSSLRQ----PGKTCELIRKSGRREILGRCPMARKRTNELANRERHGGG 19673
>gb|AC004195.1|AC004195 Homo sapiens clone UWGC:y24c027 from 6p21, complete sequence
Length = 40878
Score = 37.4 bits (85), Expect = 8.5
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = -2
Query: 289 ASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQG 344
ASP G ++RQ GK EL RREILG C M + T+++A+ G G
Sbjct: 7049 ASPRPGGSSSLRQ----PGKTCELIRKSGRREILGRCPMARKRTNELANRERHGGG 6894
>gb|AE006624.1|AE006624 Streptococcus pyogenes M1 GAS strain SF370, section 153 of 167 of the
complete genome
Length = 12928
Score = 37.4 bits (85), Expect = 8.5
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Frame = -2
Query: 699 KNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIA- 757
K Q ++ +T +D+ + K + DAS + +++DLD + A ++ + A + A
Sbjct: 1998 KKQVEKDLANLTAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEEANSKLAAL 1819
Query: 758 RRANRILLVAKREVENSE---DPKFREAVKAASDELSKTISPMVMDAKAVAGNISD 810
+ N+ L +K+ E + K KA ++L+K + AK AG SD
Sbjct: 1818 EKLNKELEESKKLTEKEKAELQAKLEAEAKALKEQLAKQAEEL---AKLRAGKASD 1660
>gb|U26458.1|SRU26458 Snakehead retrovirus (SnRV), complete genome
Length = 10688
Score = 37.4 bits (85), Expect = 8.5
Identities = 24/118 (20%), Positives = 53/118 (44%)
Frame = +1
Query: 328 LGQMTDQVADLRARGQGSSPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKK 387
+ ++ +VADL + G+G+ V +++ + + AK+E +L AMT K+ + +
Sbjct: 802 IAELEKEVADLTSAGRGADQVIAGMDKELKKTAEKYQAKLEELEEQLAAMTVEKEELESQ 981
Query: 388 IDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTSKL 445
++ + L + E + +L E + PK+R L+ + + + L
Sbjct: 982 VEGLKESLVE-------AETKKVSLMEVLTMPTRSKGPKKRGPDLKQIRSLHVMADSL 1134
>gb|U65899.1|SPU65899 Streptococcus pyogenes M protein gene, partial cds
Length = 624
Score = 37.4 bits (85), Expect = 8.5
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Frame = +1
Query: 699 KNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIA- 757
K Q ++ +T +D+ + K + DAS + +++DLD + A ++ + A + A
Sbjct: 64 KRQVEKDLANLTAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEEANSKLAAL 243
Query: 758 RRANRILLVAKREVENSE---DPKFREAVKAASDELSKTISPMVMDAKAVAGNISD 810
+ N+ L +K+ E + K KA ++L+K + AK AG SD
Sbjct: 244 EKLNKELEESKKLTEKEKAELQAKLEAEAKALKEQLAKQAEEL---AKLRAGKASD 402
>dbj|AP000509.1|AP000509 Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region,
section 8/20
Length = 100000
Score = 37.4 bits (85), Expect = 8.5
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = -2
Query: 289 ASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQG 344
ASP G ++RQ GK EL RREILG C M + T+++A+ G G
Sbjct: 83706 ASPRPGGSSSLRQ----PGKTCELIRKSGRREILGRCPMARKRTNELANRERHGGG 83551
>gb|U29585.1|SPU29585 Streptococcus pyogenes emm18.1 gene, complete cds
Length = 1332
Score = 37.4 bits (85), Expect = 8.5
Identities = 85/413 (20%), Positives = 172/413 (41%), Gaps = 10/413 (2%)
Frame = +1
Query: 213 VTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDED-----AWASKDTEAMK 267
+T +N K + +E L N ++ ++ + R +L S E+ A A E +
Sbjct: 208 LTVENKKLKTDKEQLTKENDDLKTEKDQLEQ--RSEKLASQKENLEKEVAEAKHKNETLN 381
Query: 268 RALASIDSKLNQAKGWLRDPSASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKM 327
+ KLN+ + L + + E+ + ++L++ K ++ ++ ++ G K
Sbjct: 382 INNDDLTKKLNETRQELANKQQESKE-NEKTLNELLEKTVK-DKIAREQKSKQDFGALKQ 555
Query: 328 -LGQMTDQ--VADLRARGQGSSPVAMQKAQ-QVSQGLDVLTAKVENAARKLEAMTNSKQS 383
L + +Q +++ +G A ++A+ QV + L LTA+++ + + S+Q
Sbjct: 556 ELAKKEEQNKISEASRKGLRRDLDASREAKKQVEKDLANLTAELDKVKEEKQISDASRQG 735
Query: 384 IAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEISALTS 443
+ + +DA++ E ++Q+ LA AEL D KE I
Sbjct: 736 LRRDLDASR----------EAKKQVEKDLANLT--AEL-DKVKEEKQI------------ 840
Query: 444 KLADLRRQG-KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQR 502
+D RQG + D +R KQV AL+ ANS+ A A L ++E++++
Sbjct: 841 --SDASRQGLRRDLDASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKK 984
Query: 503 WIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRG 562
+ + + +A + L + + A + + K G
Sbjct: 985 LTEKEKAELQAKLEAEAKALKEQLAKQAEELAKLRAE----KASDSQTPDAKPGNKAVPG 1152
Query: 563 EGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
+G++PQA +Q + +K+ K ++ T E ++ F T + ++A A A
Sbjct: 1153KGQAPQAGTKPNQNKAPMKETKRQLPS--TGEAANPFF-TAAALTVMATAGVA 1302
>dbj|AB023059.1|AB023059 Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region,
clone:TY1G9, complete sequence
Length = 27494
Score = 37.4 bits (85), Expect = 8.5
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = -2
Query: 289 ASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQG 344
ASP G ++RQ GK EL RREILG C M + T+++A+ G G
Sbjct: 18061 ASPRPGGSSSLRQ----PGKTCELIRKSGRREILGRCPMARKRTNELANRERHGGG 17906
>ref|XM_087932.1| Homo sapiens hypothetical gene supported by AK056834 (LOC154567),
mRNA
Length = 2784
Score = 37.4 bits (85), Expect = 8.5
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = +3
Query: 289 ASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQG 344
ASP G ++RQ GK EL RREILG C M + T+++A+ G G
Sbjct: 18 ASPRPGGSSSLRQ----PGKTCELIRKSGRREILGRCPMARKRTNELANRERHGGG 173
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 18, 2002 12:08 AM
Number of letters in database: 576,412,323
Number of sequences in database: 1,174,033
Lambda K H
0.314 0.128 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,949,073,983
Number of Sequences: 1174033
Number of extensions: 40684444
Number of successful extensions: 127396
Number of sequences better than 10.0: 308
Number of HSP's better than 10.0 without gapping: 20911
Number of HSP's successfully gapped in prelim test: 6972
Number of HSP's that attempted gapping in prelim test: 96337
Number of HSP's gapped (non-prelim): 51224
length of query: 1066
length of database: 1,623,793,206
effective HSP length: 146
effective length of query: 920
effective length of database: 1,452,384,388
effective search space: 1336193636960
effective search space used: 1336193636960
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 84 (37.0 bits)