TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(247 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,164,257 sequences; 587,334,133 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_022909.1| Homo sapiens centromere protein H (CENPH),... 437 e-121
dbj|AB035124.1|AB035124 Homo sapiens mRNA for kinetochore p... 437 e-121
gb|BC015355.1|BC015355 Homo sapiens, kinetochore protein CE... 437 e-121
gb|BC012024.1|BC012024 Homo sapiens, kinetochore protein CE... 437 e-121
ref|NM_021886.1| Mus musculus centromere autoantigen H (Cen... 298 3e-79
dbj|AB017634.1|AB017634 Mus musculus mRNA for ENP, complete... 298 3e-79
dbj|AK011738.1|AK011738 Mus musculus 10 days embryo whole b... 234 1e-74
dbj|AK011264.1|AK011264 Mus musculus 10 days embryo whole b... 231 3e-74
dbj|AK006208.1|AK006208 Mus musculus adult male testis cDNA... 262 2e-68
dbj|AK012907.1|AK012907 Mus musculus 10, 11 days embryo who... 202 1e-57
dbj|AK010533.1|AK010533 Mus musculus ES cells cDNA, RIKEN f... 189 2e-46
dbj|AB055783.1|AB055783 Gallus gallus mRNA for centromere p... 127 1e-27
gb|AC022107.8| Homo sapiens chromosome 5 clone CTC-351M12, ... 107 1e-21
gb|L26956.1|HAMFAR Mesocricetus auratus stearyl-CoA desatur... 95 4e-18
dbj|AK027705.1|AK027705 Homo sapiens cDNA FLJ14799 fis, clo... 57 1e-06
emb|AL589649.4|AL589649 Human DNA sequence from clone RP11-... 57 1e-06
ref|XM_029179.1| Homo sapiens KIAA1275 protein (KIAA1275), ... 57 1e-06
dbj|AB033101.1|AB033101 Homo sapiens mRNA for KIAA1275 prot... 57 1e-06
ref|NM_017571.1| Homo sapiens hypothetical protein (LOC5558... 52 6e-05
gb|AF112218.1|AF112218 Homo sapiens unknown mRNA 52 6e-05
dbj|D64159.1|HUM37 Homo sapiens mRNA for 3-7 gene product, ... 52 6e-05
ref|XM_048095.4| Homo sapiens hypothetical protein (LOC5558... 52 6e-05
dbj|AB015484.1|AB015484 Dugesia japonica mRNA for myosin he... 49 3e-04
dbj|AP000988.1|AP000988 Sulfolobus tokodaii genomic DNA, co... 47 0.001
gb|AF212149.1|AF212149 Oryctolagus cuniculus skeletal muscl... 47 0.001
gb|AF212147.1|AF212147 Oryctolagus cuniculus skeletal muscl... 47 0.001
gb|U62026.3|GGU62026 Gallus gallus cardiac muscle factor 1 ... 47 0.001
gb|BC015539.1|BC015539 Homo sapiens, clone IMAGE:3885871, mRNA 47 0.001
gb|AF212148.1|AF212148 Oryctolagus cuniculus skeletal muscl... 47 0.001
gb|AF041382.1|AF041382 Drosophila melanogaster microtubule ... 47 0.002
ref|NM_069127.1| Caenorhabditis elegans 47 0.002
gb|U67484.1|U67484 Methanococcus jannaschii section 26 of 1... 46 0.002
gb|U51472.2|FCU51472 Felis catus superfast myosin heavy cha... 45 0.004
ref|NM_010856.1| Mus musculus myosin heavy chain, cardiac m... 45 0.004
gb|M76600.1|MUSACMHCC Mouse alpha cardiac myosin heavy chai... 45 0.004
gb|M76599.1|MUSACMHCB Mouse alpha cardiac myosin heavy chai... 45 0.004
gb|M76598.1|MUSACMHCA Mouse alpha cardiac myosin heavy chai... 45 0.004
gb|M76601.1|MUSACMHCD Mouse alpha cardiac myosin heavy chai... 45 0.004
ref|NM_017239.1| Rattus norvegicus myosin heavy chain, card... 45 0.004
emb|X15938.1|RNMHCA Rat mRNA for alpha cardiac myosin heavy... 45 0.004
ref|NM_012604.1| Rattus norvegicus Myosin, heavy polypeptid... 45 0.005
gb|AF347076.1|AF347076 Gallus gallus Rho-associated coiled ... 45 0.005
ref|XM_012620.2| Homo sapiens myosin, heavy polypeptide 13,... 45 0.007
dbj|AB032197.1|AB032197 Gallus gallus mRNA for myosin heavy... 45 0.007
dbj|D45163.1|HROMHCEMB Halocynthia roretzi mRNA for embryon... 45 0.007
ref|NM_124607.1| Arabidopsis thaliana chromosome 5 CHR5v12... 44 0.009
gb|AY016023.1| Sphoeroides nephelus alpha globin gene clust... 44 0.009
dbj|AB019226.1|AB019226 Arabidopsis thaliana genomic DNA, c... 44 0.009
gb|AE007684.1|AE007684 Clostridium acetobutylicum ATCC824 s... 44 0.012
emb|Y14855.1|HARNATM Helix aspersa mRNA for tropomyosin 44 0.012
ref|XM_047196.3| Homo sapiens myosin, heavy polypeptide 7B,... 44 0.015
dbj|AB040945.1|AB040945 Homo sapiens mRNA for KIAA1512 prot... 44 0.015
gb|BC007808.1|BC007808 Homo sapiens, clone IMAGE:4298477, m... 44 0.015
dbj|D00943.1|HUMCAMHC Homo sapiens mRNA for cardiac alpha-m... 44 0.015
gb|U75316.1|SSU75316 Sus scrofa beta-myosin heavy chain mRN... 43 0.020
gb|AC009905.11|AC009905 Drosophila melanogaster, chromosome... 43 0.020
gb|AC010121.7|AC010121 Drosophila melanogaster, chromosome ... 43 0.020
gb|AE003655.2|AE003655 Drosophila melanogaster genomic scaf... 43 0.020
gb|AF065445.1|AF065445 Sinorhizobium meliloti Lon protease ... 43 0.020
dbj|AB023217.1|AB023217 Homo sapiens mRNA for KIAA1000 prot... 43 0.020
emb|AL591786.1|SME591786 Sinorhizobium meliloti 1021 comple... 43 0.020
ref|XM_033377.4| Homo sapiens myosin, heavy polypeptide 6, ... 43 0.020
ref|XM_036988.3| Homo sapiens KIAA1000 protein (KIAA1000), ... 43 0.020
gb|AF097904.1|AF097904 Rana catesbeiana myosin heavy chain ... 43 0.020
gb|AE006585.1|AE006585 Streptococcus pyogenes M1 GAS strain... 43 0.026
ref|NM_003802.1| Homo sapiens myosin, heavy polypeptide 13,... 43 0.026
gb|AF111782.2|AF111782 Homo sapiens extraocular muscle myos... 43 0.026
gb|AE001032.1|AE001032 Archaeoglobus fulgidus section 75 of... 43 0.026
ref|NM_022246.1| Rattus norvegicus RAD50 homolog (S. cerevi... 43 0.026
gb|AF218576.1|AF218576 Rattus norvegicus Rad50 mRNA, comple... 43 0.026
gb|K02443.1|RABMYSAC Rabbit cardiac alpha-myosin heavy chai... 43 0.026
gb|AE004993.1|AE004993 Halobacterium sp. NRC-1 section 24 o... 43 0.026
emb|AJ131693.1|HSA131693 Homo sapiens mRNA for AKAP450 protein 42 0.034
dbj|AK057542.1|AK057542 Homo sapiens cDNA FLJ32980 fis, clo... 42 0.034
dbj|AK055436.1|AK055436 Homo sapiens cDNA FLJ30874 fis, clo... 42 0.034
gb|M26510.1|CHKMYHN Chicken nonmuscle myosin heavy chain (M... 42 0.034
dbj|D83077.1|HUMTPRD Homo sapiens mRNA for TPRD, complete cds 42 0.034
dbj|D83327.1|D83327 Homo sapiens DCRR1 mRNA, partial cds 42 0.034
gb|AF204761.1|AF204761 Schizosaccharomyces pombe spindle-re... 42 0.034
gb|AF083037.1|AF083037 Homo sapiens A-kinase anchoring prot... 42 0.034
dbj|AB019691.1|AB019691 Homo sapiens mRNA for Centrosome- a... 42 0.034
emb|X06546.1|GGMYHGSM Chicken mRNA for gizzard smooth muscl... 42 0.034
gb|AE003487.1|AE003487 Drosophila melanogaster genomic scaf... 42 0.034
gb|AF057019.1|AF057019 Dictyostelium discoideum interaptin ... 42 0.034
emb|Z95620.1|SPBC3D6 S.pombe chromosome II cosmid c3D6 42 0.034
ref|XM_029162.2| Homo sapiens A kinase (PRKA) anchor protei... 42 0.034
ref|NM_003316.1| Homo sapiens tetratricopeptide repeat doma... 42 0.034
dbj|D84295.1|D84295 Human mRNA for possible protein TPRDII,... 42 0.034
dbj|D84294.1|D84294 Human mRNA for TPRDI, complete cds 42 0.034
ref|NM_018365.1| Homo sapiens hypothetical protein FLJ11222... 42 0.034
gb|AF167159.1|AF167159 Sinorhizobium meliloti Lon protease ... 42 0.034
dbj|AK002084.1|AK002084 Homo sapiens cDNA FLJ11222 fis, clo... 42 0.034
dbj|D84296.1|D84296 Human mRNA for TPRDIII, complete cds 42 0.034
gb|AF091711.1|AF091711 Homo sapiens splice variant AKAP350 ... 42 0.034
dbj|AB074447.1|AB074447 Macaca fascicularis testis cDNA clo... 42 0.044
emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chl... 42 0.044
dbj|D25542.1|HUMGCP372 Human mRNA for golgi antigen gcp372,... 42 0.044
ref|NM_002078.2| Homo sapiens golgi autoantigen, golgin sub... 42 0.044
gb|U41740.1|HSU41740 Human trans-Golgi p230 mRNA, complete cds 42 0.044
gb|U85022.1|GGU85022 Gallus gallus slow myosin heavy chain ... 42 0.044
gb|U31906.1|HSU31906 Homo sapiens golgin-245 mRNA, complete... 42 0.044
ref|NM_004487.1| Homo sapiens golgi autoantigen, golgin sub... 42 0.044
emb|X75304.1|HSMAC H.sapiens giantin mRNA 42 0.044
dbj|AB030645.1|AB030645 Streptococcus pyogenes genes for Mu... 42 0.044
ref|NM_016343.2| Homo sapiens centromere protein F (350/400... 42 0.044
gb|U30872.1|HSU30872 Human mitosin mRNA, complete cds 42 0.044
emb|X82834.1|HSGOLGIN H.sapiens mRNA for golgin 42 0.044
gb|AF335500.1|AF335500 Physarum polycephalum major plasmodi... 42 0.058
dbj|AP003192.2|AP003192 Clostridium perfringens DNA, comple... 42 0.058
gb|U67604.1|U67604 Methanococcus jannaschii section 146 of ... 42 0.058
dbj|AB021180.1|AB021180 Gallus gallus mRNA for skeletal myo... 42 0.058
emb|X59552.1|GDVMHC G.domesticus mRNA for ventricular myosi... 42 0.058
dbj|AB057661.1|AB057661 Gallus gallus myosin heavy chain mR... 42 0.058
gb|M74087.1|CHKMYOSIND Gallus gallus fast myosin heavy chai... 42 0.058
emb|AJ312390.1|MMU312390 Mus musculus mRNA for nonmuscle he... 42 0.058
gb|L03188.1|YSCINTANA Saccharomyces cerevisiae integrin ana... 42 0.058
ref|NM_069219.1| Myosin head (motor domain) 42 0.058
ref|NM_012810.1| Rattus norvegicus Synaptonemal complex pro... 42 0.058
emb|X67805.1|RNSCP1A R.norvegicus SCP1 mRNA 42 0.058
dbj|AB025260.1|AB025260 Sus scrofa mRNA for myosin heavy ch... 42 0.058
gb|L27838.1|PFARHPR Plasmodium yoelii rhoptry protein, comp... 41 0.075
gb|AF097905.1|AF097905 Rana catesbeiana myosin heavy chain ... 41 0.075
gb|AF323443.1|AF323443 Plasmodium yoelii yoelii clone 11 23... 41 0.075
ref|NM_014635.1| Homo sapiens KIAA0336 gene product (KIAA03... 41 0.075
dbj|AB002334.1|AB002334 Human mRNA for KIAA0336 gene, compl... 41 0.075
dbj|AB025261.1|AB025261 Sus scrofa mRNA for myosin heavy ch... 41 0.075
gb|AF238234.2|AF238234 Entamoeba histolytica diaphanous pro... 41 0.075
dbj|AP003185.1|AP003185 Clostridium perfringens DNA, comple... 41 0.075
gb|AF238235.1|AF238235 Entamoeba histolytica diaphanous pro... 41 0.075
gb|AF410847.1|AF410847 Ovine herpesvirus 2 latency associat... 41 0.098
ref|NM_078977.1| Drosophila melanogaster toutatis (tou), mRNA 41 0.098
dbj|AB004801.1|AB004801 Gallus gallus mRNA for chick atrial... 41 0.098
gb|U32574.1|OCU32574 Oryctolagus cuniculus myosin heavy cha... 41 0.098
dbj|D63466.1|D63466 Gallus gallus mRNA for atrial myosin he... 41 0.098
dbj|D31822.1|CHKCCSV2 Chicken mRNA for atrial specific myos... 41 0.098
gb|L32978.1|HAMSYN1A Mesocricetus auratus synaptonemal comp... 41 0.098
ref|NM_100211.1| Arabidopsis thaliana chromosome 1 CHR1v12... 41 0.098
gb|AF207528.1|AF207528 Gallus gallus cardiac muscle factor ... 41 0.098
emb|Z83107.1|CEF32A7 Caenorhabditis elegans cosmid F32A7, c... 40 0.13
gb|AC006601.1|AC006601 Arabidopsis thaliana chromosome V ma... 40 0.13
gb|L03534.1|ENHMHCAX Entamoeba histolytica myosin heavy cha... 40 0.13
gb|AC002130.2|AC002130 Genomic sequence for Arabidopsis tha... 40 0.13
emb|Z48434.1|LCVICNC L.culinaris gene for vicilin type C 40 0.13
ref|NM_061195.1| myosin heavy chain 40 0.13
dbj|AP000985.1|AP000985 Sulfolobus tokodaii genomic DNA, co... 40 0.13
gb|AF272034.1|AF272034 Gallus gallus fast myosin heavy chai... 40 0.13
dbj|AB059398.1|AB059398 Bos taurus MyHC-2a mRNA for myosin ... 40 0.13
ref|XM_028495.1| Homo sapiens hypothetical protein FLJ22037... 40 0.13
ref|NM_078529.1| Drosophila melanogaster TATA box binding p... 40 0.13
gb|J01050.1|CELMYUNC Caenorhabditis elegans myosin heavy ch... 40 0.13
gb|AF136569.1|AF136569 Drosophila melanogaster TATA box bin... 40 0.13
dbj|AK025690.1|AK025690 Homo sapiens cDNA: FLJ22037 fis, cl... 40 0.13
ref|NM_122470.1| Arabidopsis thaliana chromosome 5 CHR5v12... 40 0.13
gb|U26360.1|OCU26360 Oryctolagus cuniculus A-kinase anchori... 40 0.13
emb|Z48437.1|LCOVICN L.culinaris orientalis gene for vicilin 40 0.13
ref|NM_105392.1| Arabidopsis thaliana chromosome 1 CHR1v12... 40 0.13
dbj|AB015485.1|AB015485 Dugesia japonica mRNA for myosin he... 40 0.17
gb|U87231.1|GGU87231 Gallus gallus myosin heavy chain mRNA,... 40 0.17
ref|XM_012618.3| Homo sapiens myosin, heavy polypeptide 2, ... 40 0.17
gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome II... 40 0.17
ref|NM_017534.1| Homo sapiens myosin, heavy polypeptide 2, ... 40 0.17
gb|AF111784.1|AF111784 Homo sapiens myosin heavy chain IIa ... 40 0.17
gb|U53862.1|CCU53862 Coturnix coturnix slow myosin heavy ch... 40 0.17
emb|Z74105.1|SCYDL057W S.cerevisiae chromosome IV reading f... 40 0.17
gb|S75411.1|S75411 vir regulon: mry15=Mry homolog...scpA15=... 40 0.17
dbj|AP003515.1|AP003515 Clostridium perfringens plasmid pCP... 40 0.17
gb|U85023.1|GGU85023 Gallus gallus slow myosin heavy chain ... 40 0.17
dbj|AB025262.1|AB025262 Sus scrofa mRNA for myosin heavy ch... 40 0.17
gb|U31463.1|RNU31463 Rattus norvegicus nonmuscle myosin hea... 40 0.17
ref|NM_013194.1| Rattus norvegicus Myosin, heavy polypeptid... 40 0.17
dbj|AB059399.1|AB059399 Bos taurus MyHC-2x mRNA for myosin ... 40 0.17
dbj|AK027638.1|AK027638 Homo sapiens cDNA FLJ14732 fis, clo... 40 0.17
emb|X54378.1|SCUSO1 S.cerevisiae gene for Uso1 protein, inv... 40 0.17
emb|Z74106.1|SCYDL058W S.cerevisiae chromosome IV reading f... 40 0.17
ref|NM_111385.1| Arabidopsis thaliana chromosome 3 CHR3v12... 40 0.17
gb|J00671.1|RABMYSA Rabbit cardiac alpha-myosin heavy chain... 40 0.17
ref|NM_032358.1| Homo sapiens hypothetical protein MGC13183... 40 0.17
gb|BC006444.1|BC006444 Homo sapiens, Similar to RIKEN cDNA ... 40 0.17
emb|X67428.1|PSVICJ Pisum sativum vicJ gene 40 0.17
ref|NM_030830.1| Rattus norvegicus leucine zipper protein 1... 40 0.22
gb|AF181259.1|AF181259 Rattus norvegicus putative transcrip... 40 0.22
gb|AF435011.1|AF435011 Homo sapiens NUANCE (NUA) mRNA, comp... 40 0.22
ref|NM_101194.1| Arabidopsis thaliana chromosome 1 CHR1v12... 40 0.22
ref|NM_080325.1| Drosophila melanogaster lava lamp (lva), mRNA 40 0.22
emb|X64346.1|HSGEND Herpesvirus saimiri complete genome DNA 40 0.22
dbj|AB071050.1|AB071050 Macaca fascicularis testis cDNA clo... 40 0.22
ref|NM_103688.1| Arabidopsis thaliana chromosome 1 CHR1v12... 40 0.22
gb|AE003429.2|AE003429 Drosophila melanogaster genomic scaf... 40 0.22
gb|M86409.1|HSV3PRGEN Herpesvirus saimiri the most three pr... 40 0.22
ref|NM_075971.1| Caenorhabditis elegans 40 0.22
gb|L49344.1|L49344 Mus musculus leucine zipper protein 1 (L... 40 0.22
ref|NM_002473.1| Homo sapiens myosin, heavy polypeptide 9, ... 40 0.22
gb|AC012358.9| Homo sapiens BAC clone RP11-321E13 from 2, c... 40 0.22
emb|AL035475.6|PFMAL4P2 Plasmodium falciparum MAL4P2, compl... 40 0.22
gb|M31013.1|HUMMYONM Human nonmuscle myosin heavy chain (NM... 40 0.22
gb|S76368.1|S76368 ORF 5' of ECLF2...ECRF3=G protein-couple... 40 0.22
dbj|AK074055.1| Homo sapiens mRNA for FLJ00126 protein 40 0.22
gb|AF150755.1|AF150755 Mus musculus microtubule-actin cross... 40 0.22
gb|BC006075.1|BC006075 Mus musculus, Similar to Myosin, hea... 40 0.22
gb|AF068647.1|AF068647 Streptococcus pneumoniae strain E134... 40 0.22
gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F... 39 0.29
dbj|AB070100.1|AB070100 Macaca fascicularis testis cDNA clo... 39 0.29
ref|NM_117062.1| Arabidopsis thaliana chromosome 4 CHR4v12... 39 0.29
gb|AY061759.1| Homo sapiens nesprin-2 gamma mRNA, complete cds 39 0.29
dbj|AB033763.2|AB033763 Staphylococcus aureus DNA, type-I s... 39 0.29
gb|M58163.1|SUS2B2AA S.purpuratus open reading frame 39 0.29
gb|AF115379.2|AF115379 Staphylococcus aureus surface protei... 39 0.29
gb|AE000769.1|AE000769 Aquifex aeolicus section 101 of 109 ... 39 0.29
emb|Y16350.1|OCNEBMRNA Oryctolagus cuniculus mRNA for nebulin 39 0.29
ref|NM_070023.1| Caenorhabditis elegans 39 0.37
ref|NM_004986.1| Homo sapiens kinectin 1 (kinesin receptor)... 39 0.37
dbj|D13629.1|HUMRSC1300 Human mRNA for KIAA0004 gene, compl... 39 0.37
gb|BC008538.1|BC008538 Mus musculus, Similar to myosin, hea... 39 0.37
emb|AJ248286.1|CNSPAX04 Pyrococcus abyssi complete genome; ... 39 0.37
ref|XM_007337.7| Homo sapiens kinectin 1 (kinesin receptor)... 39 0.37
ref|XM_011069.3| Homo sapiens similar to golgi autoantigen,... 39 0.37
gb|AF056936.1|AF056936 Plasmodium falciparum mature parasit... 39 0.37
emb|X51593.1|HSBMHCE Human MHC mRNA for embryonic myosin he... 39 0.37
gb|L25616.1|HUMCG1X Homo sapiens kinectin mRNA, complete cds 39 0.37
emb|Z71266.1|CER06C7 Caenorhabditis elegans cosmid R06C7, c... 39 0.37
emb|X15696.1|HSSMHCE Human muscle mRNA for embryonic myosin... 39 0.37
emb|Z71501.1|SCYNL225C S.cerevisiae chromosome XIV reading ... 39 0.37
gb|S47577.1|S47577 moesin homolog [mice, teratocarcinoma F9... 39 0.37
gb|AF136711.1|AF136711 Amoeba proteus myosin heavy chain mR... 39 0.37
emb|Z69381.1|SCCXIV39K S.cerevisiae 38,855 bp segment of ch... 39 0.37
emb|X13100.1|HSEMYHC Human mRNA fragment for myosin heavy c... 39 0.37
gb|L49472.1|MUSFA2E17 Mus musculus troponin T fast skeletal... 39 0.37
dbj|AB055276.1|AB055276 Macaca fascicularis brain cDNA, clo... 39 0.37
ref|NM_002470.1| Homo sapiens myosin, heavy polypeptide 3, ... 39 0.37
emb|AJ312240.1|BPS312240 Bacteriophage PSA of Listeria mono... 39 0.37
gb|U22019.1|MHU22019 Mycoplasma hominis PG21 P120 (p120) ge... 39 0.37
emb|X13988.1|HSMYHC Human mRNA for embryonic myosin heavy c... 39 0.37
emb|X08065.1|CEMYO1 Caenorhabditis elegans myo-1 gene for m... 39 0.37
ref|NM_059652.1| myosin heavy chain 39 0.37
dbj|AP000493.1|AP000493 Homo sapiens genomic DNA, chromosom... 39 0.37
gb|U87265.1|BTU87265 Bos taurus non-muscle myosin heavy cha... 39 0.37
gb|AF014012.1|AF014012 Gallus gallus restin mRNA, complete cds 39 0.49
ref|NM_062615.1| Caenorhabditis elegans 39 0.49
emb|Z69368.1|SPAC27F1 S.pombe chromosome I cosmid c27F1 39 0.49
dbj|AB045982.1|AB045982 Patinopecten yessoensis mRNA for my... 39 0.49
gb|M93676.1|CHKNMHCB Chicken nonmuscle myosin heavy chain (... 39 0.49
ref|XM_052590.1| Homo sapiens myosin, heavy polypeptide 1, ... 39 0.49
gb|M74085.1|CHKMYOSINB Gallus gallus fast myosin heavy chai... 39 0.49
ref|NM_005963.2| Homo sapiens myosin, heavy polypeptide 1, ... 39 0.49
gb|AF111785.1|AF111785 Homo sapiens myosin heavy chain IIx/... 39 0.49
emb|Z22551.1|HSKINEC H.sapiens kinectin gene 39 0.49
emb|AJ310552.1|MMU310552 Mus musculus mRNA for SMC6 protein 39 0.49
ref|NM_079636.1| Drosophila melanogaster Tropomyosin 1 (Tm1... 39 0.49
gb|J03502.1|DROTROIIN D.melanogaster tropomyosin II non-mus... 39 0.49
dbj|AB018346.1|AB018346 Homo sapiens mRNA for KIAA0803 prot... 39 0.49
gb|AF272033.1|AF272033 Gallus gallus fast myosin heavy chai... 39 0.49
gb|AF045650.1|AF045650 Gallus gallus cytoplasmic linker pro... 39 0.49
gb|AC010474.5| Homo sapiens chromosome 5 clone CTD-2306F13,... 39 0.49
gb|AY060414.1| Drosophila melanogaster LD37158 full length ... 39 0.49
dbj|AB039672.1|AB039672 Pennahia argentata mRNA for myosin ... 39 0.49
emb|X17589.1|GGMHCFMHA G.gallus RNA for fibroblast myosin h... 39 0.49
ref|XM_090842.1| Homo sapiens similar to Syne-1B (LOC161287... 39 0.49
ref|NM_125990.1| Arabidopsis thaliana chromosome 5 CHR5v12... 38 0.64
gb|AE001417.1|AE001417 Plasmodium falciparum chromosome 2, ... 38 0.64
emb|AL031428.9|HS184J9 Human DNA sequence from clone RP1-18... 38 0.64
ref|XM_039452.1| Homo sapiens synaptic nuclei expressed gen... 38 0.64
emb|Z38059.1|SC4357 S.cerevisiae chromosome IX lambda clone... 38 0.64
dbj|AK006021.1|AK006021 Mus musculus adult male testis cDNA... 38 0.64
gb|AF265355.1|AF265355 Rana catesbeiana myosin heavy chain ... 38 0.64
dbj|AK074153.1| Homo sapiens mRNA for FLJ00226 protein 38 0.64
gb|AY063811.1| Arabidopsis thaliana putative kinesin calmod... 38 0.64
gb|AE001375.1|AE001375 Plasmodium falciparum chromosome 2, ... 38 0.64
emb|X05958.1|OCMHCR Rabbit mRNA for fast skeletal muscle my... 38 0.64
ref|NM_019938.1| Mus musculus sperm tail associated protein... 38 0.64
dbj|AB029919.1|AB029919 Mus musculus STAP mRNA for sperm ta... 38 0.64
ref|NM_015180.1| Homo sapiens synaptic nuclei expressed gen... 38 0.64
emb|AL080133.1|HSM800645 Homo sapiens mRNA; cDNA DKFZp434G1... 38 0.64
gb|L40358.1|ATHKINHC Arabidopsis thaliana calmodulin-bindin... 38 0.64
gb|AF031886.1|AF031886 Plasmodium yoelii yoelii erythrocyte... 38 0.64
ref|NM_118735.1| Arabidopsis thaliana chromosome 4 CHR4v12... 38 0.64
gb|AF273043.1|AF273043 Homo sapiens CTCL tumor antigen se2-... 38 0.83
gb|BC017293.1|BC017293 Homo sapiens, moesin, clone MGC:2954... 38 0.83
ref|NM_010833.1| Mus musculus moesin (Msn), mRNA 38 0.83
emb|AJ131892.1|GGA131892 Gallus gallus mRNA for Hyperion pr... 38 0.83
gb|M86390.1|MUSMOES Mus domesticus moesin mRNA, 3' end 38 0.83
ref|XM_013042.3| Homo sapiens moesin (MSN), mRNA 38 0.83
emb|X61236.1|SCNUM1 S.cerevisiae NUM1 gene, involved in nuc... 38 0.83
ref|XM_032672.1| Homo sapiens synaptonemal complex protein ... 38 0.83
emb|AL645669.11| Mouse DNA sequence from clone RP23-26A10 o... 38 0.83
emb|AJ310997.1|NTA310997 Nicotiana tabacum partial mRNA for... 38 0.83
gb|AF004811.1|AF004811 Rattus norvegicus moesin mRNA, compl... 38 0.83
ref|NM_030863.1| Rattus norvegicus moesin (Msn), mRNA 38 0.83
dbj|AB046818.1|AB046818 Homo sapiens mRNA for KIAA1598 prot... 38 0.83
ref|NM_124402.1| Arabidopsis thaliana chromosome 5 CHR5v12... 38 0.83
ref|NM_003176.1| Homo sapiens synaptonemal complex protein ... 38 0.83
emb|Z50046.1|SC8358 S.cerevisiae chromosome IV cosmid 8358 38 0.83
dbj|D67035.1|D67035 Homo sapiens mRNA for SCP-1, complete cds 38 0.83
ref|NM_002444.1| Homo sapiens moesin (MSN), mRNA 38 0.83
dbj|AB070016.1|AB070016 Macaca fascicularis testis cDNA clo... 38 0.83
gb|M81105.1|HUMMYH9 Homo sapiens MYH9 (cellular myosin heav... 38 0.83
gb|M69066.1|HUMMOESIN Human moesin mRNA, complete cds 38 0.83
gb|M97501.1|HUMCLIP Human cytoplasmic linker protein-170 al... 37 1.1
ref|NM_027670.1| Mus musculus RIKEN cDNA 4933411G06 gene (4... 37 1.1
gb|AY069554.1| Drosophila melanogaster LD27895 full length ... 37 1.1
gb|AF165817.1|AF165817 Danio rerio fast muscle specific-myo... 37 1.1
dbj|AK016770.1|AK016770 Mus musculus adult male testis cDNA... 37 1.1
gb|J02714.1|CHKMYHE Chicken embryonic myosin heavy chain ge... 37 1.1
gb|AF095786.1|AF095786 Vulpes vulpes kinectin mRNA, complet... 37 1.1
gb|AC023736.3| Drosophila melanogaster X BAC RP98-4P5 (Rosw... 37 1.1
gb|AC023696.3| Drosophila melanogaster X BAC RP98-17J10 (Ro... 37 1.1
ref|XM_052579.3| Homo sapiens myosin, heavy polypeptide 3, ... 37 1.1
gb|AF302465.1|AF302465 Pasteurella multocida P934 region 2 ... 37 1.1
gb|AE003444.1|AE003444 Drosophila melanogaster genomic scaf... 37 1.1
dbj|D11393.1|HUMHNM Homo sapiens mRNA for non-muscle myosin... 37 1.1
gb|L07649.1|YSCASF2A Saccharomyces cerevisiae anti-silencin... 37 1.4
emb|X83276.1|SCDNAIV S.cerevisiae DNA for ORFs from chromos... 37 1.4
gb|M14628.1|DDIMYHC D.discoideum myosin heavy chain gene, c... 37 1.4
emb|X99000.1|CS39KBCIV S.cerevisiae 39kb DNA segment of chr... 37 1.4
emb|Z74245.1|SCYDL197C S.cerevisiae chromosome IV reading f... 37 1.4
ref|NM_121936.1| Arabidopsis thaliana chromosome 5 CHR5v12... 37 1.4
gb|AF097907.1|AF097907 Rana catesbeiana myosin heavy chain ... 37 1.4
emb|X62947.1|HSTRKT1 H.sapiens mRNA (TRK-T1) for 55 KD protein 37 1.4
ref|NM_009071.1| Mus musculus Rho-associated coiled-coil fo... 37 1.4
gb|AF010473.1|AF010473 Schizosaccharomyces pombe myosin-lik... 37 1.4
gb|U58512.1|MMU58512 Mus musculus Rho-associated, coiled-co... 37 1.4
emb|AJ007010.1|PFA7010 Plasmodium falciparum LSA-3 gene, st... 37 1.4
emb|X03740.1|HSMYH1R Human skeletal mRNA for myosin heavy c... 37 1.4
gb|M31719.1|YSCKAR3AA S.cerevisiae nuclear fusion protein (... 37 1.4
emb|AJ302074.1|SPN302074 Streptococcus pneumoniae bacteriop... 37 1.4
gb|U40829.1|YSCP9659 Saccharomyces cerevisiae chromosome XV... 37 1.4
gb|AE001424.1|AE001424 Plasmodium falciparum chromosome 2, ... 37 1.4
emb|AL133357.1|SPAC1486 S.pombe chromosome I cosmid c1486 37 1.4
gb|J01260.1|PEAVIC7 pea vicilin mrna, pdub7 insert 37 1.4
ref|NM_031098.1| Rattus norvegicus Rho-associated kinase be... 37 1.4
gb|U61266.1|RNU61266 Rattus norvegicus Rho-associated kinas... 37 1.4
ref|NM_024729.1| Homo sapiens hypothetical protein FLJ13881... 37 1.9
emb|AL158219.11|AL158219 Human DNA sequence from clone RP5-... 37 1.9
dbj|AK023943.1|AK023943 Homo sapiens cDNA FLJ13881 fis, clo... 37 1.9
emb|AL360088.5|AL360088 Human DNA sequence from clone RP11-... 37 1.9
gb|L38909.1|DML38909 Drosophila melanogaster moesin (Dmoesi... 37 1.9
gb|BC000676.1|BC000676 Homo sapiens, clone IMAGE:3349352, m... 37 1.9
emb|X72752.1|SPEMM9A S.pyogenes emm9 gene 37 1.9
ref|NM_080343.1| Drosophila melanogaster Moesin-like (Moe),... 37 1.9
emb|X67429.1|PSVICK Pisum sativum vicK gene 37 1.9
dbj|AP000001.1|AP000001 Pyrococcus horikoshii OT3 genomic D... 37 1.9
gb|AC025538.6| Homo sapiens BAC clone RP11-274J2 from 4, co... 37 1.9
gb|L09740.1|XELNMUSMYO Xenopus laevis nonmuscle myosin heav... 37 1.9
emb|Y08160.1|DMDIDUMGE D.melanogaster mRNA for gene involve... 37 1.9
ref|NM_017533.1| Homo sapiens myosin, heavy polypeptide 4, ... 37 1.9
gb|AF111783.2|AF111783 Homo sapiens myosin heavy chain IIb ... 37 1.9
gb|AE003594.1|AE003594 Drosophila melanogaster genomic scaf... 36 2.4
gb|AE009900.1|AE009900 Pyrobaculum aerophilum strain IM2 se... 36 2.4
ref|XM_090313.1| Homo sapiens similar to restin (Reed-Stein... 36 2.4
dbj|AB041533.1|AB041533 Homo sapiens HCMOGT-1 mRNA for sper... 36 2.4
ref|XM_061644.1| Homo sapiens similar to KERATIN, TYPE I CY... 36 2.4
ref|XM_034865.1| Homo sapiens RAD50 homolog (S. cerevisiae)... 36 2.4
gb|AF317887.1|AF317887 Homo sapiens monoclonal antibody 3H1... 36 2.4
ref|NM_025114.1| Homo sapiens hypothetical protein FLJ13615... 36 2.4
emb|Z98551.1|PFMAL3P6 Plasmodium falciparum MAL3P6, complet... 36 2.4
gb|AF057299.1|AF057299 Homo sapiens RAD50-2 protein (RAD50)... 36 2.4
gb|U63139.1|HSU63139 Homo sapiens Rad50 (Rad50) mRNA, compl... 36 2.4
gb|U39701.1|U39701 Mycoplasma genitalium section 23 of 51 o... 36 2.4
emb|AJ276470.1|TTH276470 Tetrahymena thermophila mRNA for t... 36 2.4
dbj|AK023677.1|AK023677 Homo sapiens cDNA FLJ13615 fis, clo... 36 2.4
gb|BC021123.1|BC021123 Homo sapiens, clone IMAGE:3614358, m... 36 2.4
gb|AC099553.1| Drosophila melanogaster 3L BAC RP98-25G5 (Ro... 36 2.4
ref|NM_005732.1| Homo sapiens RAD50 homolog (S. cerevisiae)... 36 2.4
gb|AC010049.6| Drosophila melanogaster 3L BAC RPCI98-3O18 (... 36 2.4
gb|AF317670.1|AF317670 Sarcoptes scabiei paramyosin mRNA, c... 36 2.4
emb|AJ005969.1|CAR5969 Cicer arietinum hypothetical protein... 36 2.4
gb|AF057300.1|AF057300 Homo sapiens truncated RAD50 protein... 36 2.4
emb|Z75311.1|HSRAD50 H.sapiens mRNA for RAD50 36 2.4
ref|XM_045551.2| Homo sapiens similar to sperm antigen (LOC... 36 2.4
gb|AF145671.1|AF145671 Drosophila melanogaster clone GH1197... 36 2.4
ref|XM_017815.1| Homo sapiens myosin, heavy polypeptide 4, ... 36 2.4
gb|U31115.1|GGU31115 Group G streptococcus fibronectin bind... 36 2.4
gb|M36376.1|MUSKERDA Mouse keratin D mRNA, complete cds 36 2.4
ref|XM_044702.5| Homo sapiens myosin, heavy polypeptide 10,... 36 3.2
ref|NM_111515.1| Arabidopsis thaliana chromosome 3 CHR3v12... 36 3.2
emb|AJ299713.1|MAR299713 Microtus arvalis partial mRNA for ... 36 3.2
gb|U42409.1|DDU42409 Dictyostelium discoideum myosin heavy ... 36 3.2
dbj|AK025632.1|AK025632 Homo sapiens cDNA: FLJ21979 fis, cl... 36 3.2
gb|U19769.1|HSU19769 Human CENP-F kinetochore protein mRNA,... 36 3.2
gb|AC023677.3| Drosophila melanogaster 3L BAC RPCI98-20I1 (... 36 3.2
ref|NM_111475.1| Arabidopsis thaliana chromosome 3 CHR3v12... 36 3.2
gb|M69181.1|HUMMYOHCB Human nonmuscle myosin heavy chain-B ... 36 3.2
ref|NM_121867.1| Arabidopsis thaliana chromosome 5 CHR5v12... 36 3.2
ref|XM_001418.7| Homo sapiens centromere protein F (350/400... 36 3.2
gb|BC008234.1|BC008234 Homo sapiens, Similar to RIKEN cDNA ... 36 3.2
gb|BC021320.1|BC021320 Mus musculus, clone IMAGE:5035544, mRNA 36 3.2
gb|AY035159.1| Arabidopsis thaliana putative chromatin remo... 36 3.2
dbj|AB055861.1|AB055861 Procambarus clarkii I-con mRNA for ... 36 3.2
gb|U25725.1|HSU25725 Human AH antigen mRNA, partial cds 36 3.2
dbj|AB010075.1|AB010075 Arabidopsis thaliana genomic DNA, c... 36 3.2
ref|NM_125974.1| Arabidopsis thaliana chromosome 5 CHR5v12... 36 3.2
gb|AY056162.1| Arabidopsis thaliana putative chromatin remo... 36 3.2
ref|NM_103727.1| Arabidopsis thaliana chromosome 1 CHR1v12... 36 3.2
gb|AE000663.1|MMAE000663 Mus musculus TCR beta locus from b... 36 3.2
gb|U36927.3|PYU36927 Plasmodium yoelii rhoptry protein gene... 36 3.2
emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome ... 36 3.2
emb|Y10480.1|BFIP421MR B.fragilis plasmid pIP421 DNA, mobil... 36 3.2
gb|AF076964.1|AF076964 Giardia intestinalis hypothetical pr... 36 3.2
gb|AF009623.1|AF009623 Parascaris univalens PUMA1 (puma1) m... 36 3.2
gb|AE008723.1|AE008723 Salmonella typhimurium LT2, section ... 36 3.2
gb|AE003540.2|AE003540 Drosophila melanogaster genomic scaf... 36 3.2
emb|AL627267.1|AL627267 Salmonella enterica serovar Typhi (... 36 3.2
gb|M74751.1|MUSMYOHCA Mouse myosin heavy chain mRNA, 3' flank 27 3.9
ref|XM_006686.5| Homo sapiens restin (Reed-Steinberg cell-e... 35 4.1
gb|AF396879.1|AF396879 Mus musculus bullous pemphigoid anti... 35 4.1
gb|AE000561.1|AE000561 Helicobacter pylori 26695 section 39... 35 4.1
emb|AJ132949.1|HSA132949 Homo sapiens mRNA for rfg5 protein 35 4.1
dbj|AB022023.1|AB022023 Bos taurus mRNA for nonmuscle myosi... 35 4.1
ref|NM_105355.1| Arabidopsis thaliana chromosome 1 CHR1v12... 35 4.1
gb|BC002827.1|BC002827 Homo sapiens, tropomyosin 4, clone M... 35 4.1
emb|Z69731.1|SPAC6C3 S.pombe chromosome I cosmid c6C3 35 4.1
emb|X15786.1|HSRETTT Human ret-II gene 35 4.1
ref|XM_083776.1| similar to Rho-kinase, mRNA 35 4.1
gb|AF466646.1| Zea mays clone ZMMBBb_Z195D10 putative trans... 35 4.1
gb|BC016514.1|BC016514 Homo sapiens, Similar to translocate... 35 4.1
gb|AY051659.1| Drosophila melanogaster LD15203 full length ... 35 4.1
gb|BC007191.1|BC007191 Mus musculus, Similar to restin (Ree... 35 4.1
dbj|AK024959.1|AK024959 Homo sapiens cDNA: FLJ21306 fis, cl... 35 4.1
gb|BC020474.1|BC020474 Mus musculus, clone IMAGE:3600353, mRNA 35 4.1
gb|BC001853.1|BC001853 Homo sapiens, hypothetical protein F... 35 4.1
gb|BC001139.1|BC001139 Homo sapiens, hypothetical protein F... 35 4.1
gb|AF196973.1|AF196973 Rickettsia felis PS120 protein (D) g... 35 4.1
gb|AF087679.1|AF087679 Sus scrofa tropomyosin 4 (TPM4) mRNA... 35 4.1
gb|U69668.1|HSU69668 Human nuclear pore complex-associated ... 35 4.1
ref|NM_022461.1| Homo sapiens hypothetical protein FLJ21939... 35 4.1
gb|AC012487.12| Homo sapiens BAC clone RP11-85M14 from 2, c... 35 4.1
ref|NM_065174.1| Caenorhabditis elegans 35 4.1
dbj|AK025592.1|AK025592 Homo sapiens cDNA: FLJ21939 fis, cl... 35 4.1
gb|AF396878.1|AF396878 Mus musculus bullous pemphigoid anti... 35 4.1
gb|AF085199.1|AF085199 Homo sapiens golgin-84 mRNA, complet... 35 4.1
gb|AE006313.1|AE006313 Lactococcus lactis subsp. lactis IL1... 35 4.1
gb|AC013288.7|AC013288 Arabidopsis thaliana chromosome 1 BA... 35 4.1
ref|NM_005113.1| Homo sapiens golgi autoantigen, golgin sub... 35 4.1
gb|AF203899.1|AF203898S2 Mus musculus nebulin mRNA, partial... 35 4.1
gb|AE001695.1|AE001695 Thermotoga maritima section 7 of 136... 35 4.1
emb|X63105.1|HSTPRMR H.sapiens tpr mRNA 35 4.1
ref|NM_065175.1| Caenorhabditis elegans 35 4.1
gb|AF426167.1|AF426167 Lactococcus lactis SMC protein gene,... 35 4.1
gb|AC022351.2|AC022351 Drosophila melanogaster, chromosome ... 35 4.1
gb|AC022350.2|AC022350 Drosophila melanogaster, chromosome ... 35 4.1
ref|NM_003292.1| Homo sapiens translocated promoter region ... 35 4.1
ref|NM_003290.1| Homo sapiens tropomyosin 4 (TPM4), mRNA 35 4.1
ref|NM_002956.1| Homo sapiens restin (Reed-Steinberg cell-e... 35 4.1
emb|AJ414608.1|LLA414608 Lactococcus lactis lactis smc gene 35 4.1
emb|X66397.1|HSTPRM H.sapiens tpr mRNA 35 4.1
emb|X05276.1|HSTM30R Human mRNA for fibroblast tropomyosin ... 35 4.1
emb|X64838.1|HSRESTIN H.sapiens mRNA for restin 35 4.1
ref|NM_010664.1| Mus musculus keratin complex 1, acidic, ge... 35 4.1
ref|NM_080535.1| Drosophila melanogaster Rho-kinase (rok), ... 35 4.1
gb|AE003502.2|AE003502 Drosophila melanogaster genomic scaf... 35 4.1
gb|AF151375.1|AF151375 Drosophila melanogaster Rho-kinase (... 35 4.1
gb|AF049856.1|AF049856 Streptococcus pyogenes strain SS1457... 35 4.1
dbj|AK023385.1|AK023385 Homo sapiens cDNA FLJ13323 fis, clo... 35 4.1
gb|M11686.1|MUSKTCEB Mouse endo B cytokeratin mRNA, complet... 35 4.1
gb|BC023021.1| Homo sapiens, golgi autoantigen, golgin subf... 35 4.1
dbj|AP003596.1|AP003596 Nostoc sp. PCC 7120 DNA, complete g... 35 4.1
dbj|AP000981.1|AP000981 Sulfolobus tokodaii genomic DNA, co... 35 4.1
ref|NM_024130.1| Rattus norvegicus dynactin 1 (Dctn1), mRNA 35 5.4
emb|X62160.1|RNDP150 Rat DP-150 mRNA for 150K dynein-associ... 35 5.4
ref|NM_100746.1| Arabidopsis thaliana chromosome 1 CHR1v12... 35 5.4
gb|BC000280.1|BC000280 Homo sapiens, clone IMAGE:3357927, m... 35 5.4
gb|AE000051.2|AE000051 Mycoplasma pneumoniae M129 section 2... 35 5.4
dbj|AP000007.1|AP000007 Pyrococcus horikoshii OT3 genomic D... 35 5.4
ref|NM_024624.1| Homo sapiens hypothetical protein FLJ22116... 35 5.4
ref|NM_004082.2| Homo sapiens dynactin 1 (p150, glued homol... 35 5.4
ref|NM_023019.1| Homo sapiens dynactin 1 (p150, glued homol... 35 5.4
emb|AL136544.1|HSM801518 Homo sapiens mRNA; cDNA DKFZp761N0... 35 5.4
gb|M15428.1|RATRAFB Rat activated c-raf oncogene mRNA encod... 35 5.4
ref|NM_072338.1| Caenorhabditis elegans 35 5.4
gb|BC013978.1|BC013978 Homo sapiens, Similar to dynactin 1 ... 35 5.4
gb|AF295356.1|AF295356 Homo sapiens moesin/anaplastic lymph... 35 5.4
gb|AF273042.1|AF273042 Homo sapiens CTCL tumor antigen se1-... 35 5.4
emb|AL033534.1|SPBC215 S.pombe chromosome II cosmid c215 35 5.4
emb|AL096788.1|SPBC582 S.pombe chromosome II cosmid c582 35 5.4
dbj|AK006041.1|AK006041 Mus musculus adult male testis cDNA... 35 5.4
dbj|D10280.1|RABMHC Oryctolagus sp. mRNA for myosin heavy c... 35 5.4
emb|AL606918.9| Mouse DNA sequence from clone RP23-327O13 o... 35 5.4
emb|Z69909.1|SPAC19G10 S.pombe chromosome I cosmid c19G10 35 5.4
emb|X16831.1|ROSIVP2 Simian rotavirus SA11 gene segment 2 f... 35 5.4
gb|AY069855.1| Drosophila melanogaster SD10366 full length ... 35 5.4
dbj|AK019969.1|AK019969 Mus musculus 8 days embryo whole bo... 35 5.4
gb|L33364.1|ROTCPVP2A Simian rotavirus capsid protein VP2 g... 35 5.4
gb|L20123.1|RO1VP2X Rotavirus sp. VP2 genomic RNA, complete... 35 5.4
gb|L20084.1|RO1VP2A Rotavirus inner capsid structural prote... 35 5.4
gb|AF324060.1|AF324060 Streptococcus pyogenes Emm58 (emm58)... 35 5.4
ref|NM_129808.1| Arabidopsis thaliana chromosome 2 CHR2v12... 35 5.4
ref|XM_044851.2| Homo sapiens rab6 GTPase activating protei... 35 5.4
emb|X92370.1|SPEMM25 S.pyogenes emm25 gene 35 5.4
gb|U12681.1|OVU12681 Onchocerca volvulus OVT1 (ovt1) mRNA, ... 35 5.4
gb|M30398.1|ONGANTML O.volvulus myosin-like antigen mRNA, 3... 35 5.4
ref|XM_096157.1| Homo sapiens hypothetical protein FLJ22116... 35 5.4
ref|NM_012197.2| Homo sapiens rab6 GTPase activating protei... 35 5.4
gb|AF303741.1|AF303741 Chilo iridescent virus complete genome 35 5.4
gb|AF343750.1|AF343750 Mus musculus Trax-interacting protei... 35 5.4
gb|AC005956.3|AC005956 Arabidopsis thaliana chromosome II s... 35 5.4
emb|AJ310551.1|HSA310551 Homo sapiens mRNA for SMC6 protein 35 5.4
gb|AE001532.1|AE001532 Helicobacter pylori, strain J99 sect... 35 5.4
emb|AJ011679.2|HSA011679 Homo sapiens mRNA for Rab6 GTPase ... 35 5.4
dbj|AK026977.1|AK026977 Homo sapiens cDNA: FLJ23324 fis, cl... 35 5.4
emb|X98801.1|HSDYNACTN H.sapiens mRNA for dynactin 35 5.4
dbj|D64087.1|D64087 Daucus carota mRNA for nuclear matrix c... 35 5.4
>ref|NM_022909.1| Homo sapiens centromere protein H (CENPH), mRNA
Length = 744
Score = 437 bits (1125), Expect = e-121
Identities = 232/247 (93%), Positives = 232/247 (93%)
Frame = +1
Query: 1 MEEQPQMQDADEPADSGGEXXXXXXXXXXXXXXXCSEDRMTLLLRLRAQTKQQLLEYKSM 60
MEEQPQMQDADEPADSGGE CSEDRMTLLLRLRAQTKQQLLEYKSM
Sbjct: 1 MEEQPQMQDADEPADSGGEGRAGGPPQVAGAQAACSEDRMTLLLRLRAQTKQQLLEYKSM 180
Query: 61 VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKIS 120
VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKIS
Sbjct: 181 VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKIS 360
Query: 121 RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKN 180
RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKN
Sbjct: 361 RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKN 540
Query: 181 KQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQL 240
KQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQL
Sbjct: 541 KQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQL 720
Query: 241 EKNVDMM 247
EKNVDMM
Sbjct: 721 EKNVDMM 741
>dbj|AB035124.1|AB035124 Homo sapiens mRNA for kinetochore protein CENP-H, complete cds
Length = 744
Score = 437 bits (1125), Expect = e-121
Identities = 232/247 (93%), Positives = 232/247 (93%)
Frame = +1
Query: 1 MEEQPQMQDADEPADSGGEXXXXXXXXXXXXXXXCSEDRMTLLLRLRAQTKQQLLEYKSM 60
MEEQPQMQDADEPADSGGE CSEDRMTLLLRLRAQTKQQLLEYKSM
Sbjct: 1 MEEQPQMQDADEPADSGGEGRAGGPPQVAGAQAACSEDRMTLLLRLRAQTKQQLLEYKSM 180
Query: 61 VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKIS 120
VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKIS
Sbjct: 181 VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKIS 360
Query: 121 RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKN 180
RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKN
Sbjct: 361 RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKN 540
Query: 181 KQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQL 240
KQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQL
Sbjct: 541 KQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQL 720
Query: 241 EKNVDMM 247
EKNVDMM
Sbjct: 721 EKNVDMM 741
>gb|BC015355.1|BC015355 Homo sapiens, kinetochore protein CENP-H, clone MGC:21458
IMAGE:3451767, mRNA, complete cds
Length = 1387
Score = 437 bits (1125), Expect = e-121
Identities = 232/247 (93%), Positives = 232/247 (93%)
Frame = +1
Query: 1 MEEQPQMQDADEPADSGGEXXXXXXXXXXXXXXXCSEDRMTLLLRLRAQTKQQLLEYKSM 60
MEEQPQMQDADEPADSGGE CSEDRMTLLLRLRAQTKQQLLEYKSM
Sbjct: 70 MEEQPQMQDADEPADSGGEGRAGGPPQVAGAQAACSEDRMTLLLRLRAQTKQQLLEYKSM 249
Query: 61 VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKIS 120
VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKIS
Sbjct: 250 VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKIS 429
Query: 121 RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKN 180
RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKN
Sbjct: 430 RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKN 609
Query: 181 KQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQL 240
KQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQL
Sbjct: 610 KQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQL 789
Query: 241 EKNVDMM 247
EKNVDMM
Sbjct: 790 EKNVDMM 810
>gb|BC012024.1|BC012024 Homo sapiens, kinetochore protein CENP-H, clone MGC:21431
IMAGE:4510607, mRNA, complete cds
Length = 1379
Score = 437 bits (1125), Expect = e-121
Identities = 232/247 (93%), Positives = 232/247 (93%)
Frame = +1
Query: 1 MEEQPQMQDADEPADSGGEXXXXXXXXXXXXXXXCSEDRMTLLLRLRAQTKQQLLEYKSM 60
MEEQPQMQDADEPADSGGE CSEDRMTLLLRLRAQTKQQLLEYKSM
Sbjct: 64 MEEQPQMQDADEPADSGGEGRAGGPPQVAGAQAACSEDRMTLLLRLRAQTKQQLLEYKSM 243
Query: 61 VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKIS 120
VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKIS
Sbjct: 244 VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKIS 423
Query: 121 RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKN 180
RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKN
Sbjct: 424 RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKN 603
Query: 181 KQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQL 240
KQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQL
Sbjct: 604 KQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQL 783
Query: 241 EKNVDMM 247
EKNVDMM
Sbjct: 784 EKNVDMM 804
>ref|NM_021886.1| Mus musculus centromere autoantigen H (Cenph), mRNA
Length = 1239
Score = 298 bits (762), Expect = 3e-79
Identities = 159/247 (64%), Positives = 193/247 (77%)
Frame = +2
Query: 1 MEEQPQMQDADEPADSGGEXXXXXXXXXXXXXXXCSEDRMTLLLRLRAQTKQQLLEYKSM 60
MEEQP+ E +++G E EDR++LLLRLRAQTKQQLLEYKSM
Sbjct: 98 MEEQPR-----ERSEAGAEACEEKRGLSQAAEERI-EDRISLLLRLRAQTKQQLLEYKSM 259
Query: 61 VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKIS 120
+D +EEKTPEQIMQEKQIE KIE+LENEIE+VK E+K LAL RM+LS AL+ N+E +
Sbjct: 260 IDTNEEKTPEQIMQEKQIEVKIEELENEIEDVKSNIEMKSLALSRMKLSVALRDNMENMG 439
Query: 121 RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKN 180
++ VL D+MKH+L+L KLIMKSQ+ES +LE+KLLD+RKKRLQLKQAS SKLLEIQ EKN
Sbjct: 440 PENCVLTDDMKHILKLQKLIMKSQEESSELEKKLLDVRKKRLQLKQASRSKLLEIQIEKN 619
Query: 181 KQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQL 240
KQK D+D MENSE IK +++ LQ EIKITTV+QH FQ LIL SK NWAEDPAL+E VLQL
Sbjct: 620 KQKEDVDKMENSEMIKTMKKKLQTEIKITTVVQHTFQGLILASKTNWAEDPALRETVLQL 799
Query: 241 EKNVDMM 247
EK+++ +
Sbjct: 800 EKDLNTL 820
>dbj|AB017634.1|AB017634 Mus musculus mRNA for ENP, complete cds
Length = 1239
Score = 298 bits (762), Expect = 3e-79
Identities = 159/247 (64%), Positives = 193/247 (77%)
Frame = +2
Query: 1 MEEQPQMQDADEPADSGGEXXXXXXXXXXXXXXXCSEDRMTLLLRLRAQTKQQLLEYKSM 60
MEEQP+ E +++G E EDR++LLLRLRAQTKQQLLEYKSM
Sbjct: 98 MEEQPR-----ERSEAGAEACEEKRGLSQAAEERI-EDRISLLLRLRAQTKQQLLEYKSM 259
Query: 61 VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKIS 120
+D +EEKTPEQIMQEKQIE KIE+LENEIE+VK E+K LAL RM+LS AL+ N+E +
Sbjct: 260 IDTNEEKTPEQIMQEKQIEVKIEELENEIEDVKSNIEMKSLALSRMKLSVALRDNMENMG 439
Query: 121 RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKN 180
++ VL D+MKH+L+L KLIMKSQ+ES +LE+KLLD+RKKRLQLKQAS SKLLEIQ EKN
Sbjct: 440 PENCVLTDDMKHILKLQKLIMKSQEESSELEKKLLDVRKKRLQLKQASRSKLLEIQIEKN 619
Query: 181 KQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQL 240
KQK D+D MENSE IK +++ LQ EIKITTV+QH FQ LIL SK NWAEDPAL+E VLQL
Sbjct: 620 KQKEDVDKMENSEMIKTMKKKLQTEIKITTVVQHTFQGLILASKTNWAEDPALRETVLQL 799
Query: 241 EKNVDMM 247
EK+++ +
Sbjct: 800 EKDLNTL 820
>dbj|AK011738.1|AK011738 Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:2610042E10:centromere
autoantigen H, full insert sequence
Length = 1208
Score = 234 bits (596), Expect(2) = 1e-74
Identities = 127/201 (63%), Positives = 155/201 (76%)
Frame = +2
Query: 1 MEEQPQMQDADEPADSGGEXXXXXXXXXXXXXXXCSEDRMTLLLRLRAQTKQQLLEYKSM 60
MEEQP+ E +++G E EDR++LLLRLRAQTKQQLLEYKSM
Sbjct: 83 MEEQPR-----ERSEAGAEACEEKRGLSQAAEERI-EDRISLLLRLRAQTKQQLLEYKSM 244
Query: 61 VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKIS 120
+D +EEKTPEQIMQEKQIE KIE+LENEIE+VK E+K LAL RM+LS AL+ N+E +
Sbjct: 245 IDTNEEKTPEQIMQEKQIEVKIEELENEIEDVKSNIEMKSLALSRMKLSVALRDNMENMG 424
Query: 121 RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKN 180
++ VL D+MKH+L+L KLIMKSQ+ES +LE+KLLD+RKKRLQLKQAS SKLLEIQ EKN
Sbjct: 425 PENCVLTDDMKHILKLQKLIMKSQEESSELEKKLLDVRKKRLQLKQASRSKLLEIQIEKN 604
Query: 181 KQKIDLDSMENSERIKIIRQN 201
KQK D+D MENSE IK +++N
Sbjct: 605 KQKEDVDKMENSEMIKTMKKN 667
Score = 71.2 bits (173), Expect(2) = 1e-74
Identities = 33/48 (68%), Positives = 40/48 (82%)
Frame = +1
Query: 200 QNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQLEKNVDMM 247
+ LQ EIKITTV+QH FQ LIL SK NWAEDPAL+E VLQLEK+++ +
Sbjct: 661 KKLQTEIKITTVVQHTFQGLILASKTNWAEDPALRETVLQLEKDLNTL 804
>dbj|AK011264.1|AK011264 Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:2610001L24:centromere
autoantigen H, full insert sequence
Length = 1210
Score = 231 bits (590), Expect(2) = 3e-74
Identities = 126/200 (63%), Positives = 154/200 (77%)
Frame = +2
Query: 1 MEEQPQMQDADEPADSGGEXXXXXXXXXXXXXXXCSEDRMTLLLRLRAQTKQQLLEYKSM 60
MEEQP+ E +++G E EDR++LLLRLRAQTKQQLLEYKSM
Sbjct: 83 MEEQPR-----ERSEAGAEACEEKRGLSQAAEERI-EDRISLLLRLRAQTKQQLLEYKSM 244
Query: 61 VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKIS 120
+D +EEKTPEQIMQEKQIE KIE+LENEIE+VK E+K LAL RM+LS AL+ N+E +
Sbjct: 245 IDTNEEKTPEQIMQEKQIEVKIEELENEIEDVKSNIEMKSLALSRMKLSVALRDNMENMG 424
Query: 121 RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKN 180
++ VL D+MKH+L+L KLIMKSQ+ES +LE+KLLD+RKKRLQLKQAS SKLLEIQ EKN
Sbjct: 425 PENCVLTDDMKHILKLQKLIMKSQEESSELEKKLLDVRKKRLQLKQASRSKLLEIQIEKN 604
Query: 181 KQKIDLDSMENSERIKIIRQ 200
KQK D+D MENSE IK +++
Sbjct: 605 KQKEDVDKMENSEMIKTMKK 664
Score = 72.0 bits (175), Expect(2) = 3e-74
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +3
Query: 199 RQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQLEKNVDMM 247
++ LQ EIKITTV+QH FQ LIL SK NWAEDPAL+E VLQLEK+++ +
Sbjct: 660 KKKLQTEIKITTVVQHTFQGLILASKTNWAEDPALRETVLQLEKDLNTL 806
>dbj|AK006208.1|AK006208 Mus musculus adult male testis cDNA, RIKEN full-length enriched
library, clone:1700021I11:centromere autoantigen H, full
insert sequence
Length = 1223
Score = 262 bits (669), Expect = 2e-68
Identities = 134/197 (68%), Positives = 162/197 (82%)
Frame = +1
Query: 51 KQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLST 110
K L KSM+D +EEKTPEQIMQEKQIE KIE+LENEIE+VK E+K LAL RM+LS
Sbjct: 214 KTAALRIKSMIDTNEEKTPEQIMQEKQIEVKIEELENEIEDVKSNIEMKSLALSRMKLSV 393
Query: 111 ALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASES 170
AL+ N+E + ++ VL D+MKH+L+L KLIMKSQ+ES +LE+KLLD+RKKRLQLKQAS S
Sbjct: 394 ALRDNMENMGPENCVLTDDMKHILKLQKLIMKSQEESSELEKKLLDVRKKRLQLKQASRS 573
Query: 171 KLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAED 230
KLLEIQ EKNKQK D+D MENSE IK +++ LQ EIKITTV+QH FQ LIL SK NWAED
Sbjct: 574 KLLEIQIEKNKQKEDVDKMENSEMIKTMKKKLQTEIKITTVVQHTFQGLILASKTNWAED 753
Query: 231 PALKEIVLQLEKNVDMM 247
PAL+E VLQLEK+++ +
Sbjct: 754 PALRETVLQLEKDLNTL 804
Score = 42.7 bits (99), Expect = 0.026
Identities = 32/101 (31%), Positives = 52/101 (50%)
Frame = +2
Query: 1 MEEQPQMQDADEPADSGGEXXXXXXXXXXXXXXXCSEDRMTLLLRLRAQTKQQLLEYKSM 60
MEEQP+ E +++G E EDR++LLLRLRAQTKQQLLE
Sbjct: 83 MEEQPR-----ERSEAGAEACEEKRGLSQAAEERI-EDRISLLLRLRAQTKQQLLE*SP* 244
Query: 61 VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKL 101
++K ++ ++ + + K++ +++ KV + K L
Sbjct: 245 STQMKKKLQNRLCKKNRSKLKLKSWRMKLKM*KVILK*KVL 367
>dbj|AK012907.1|AK012907 Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:2810046K12:ENP, full insert
sequence
Length = 1170
Score = 202 bits (515), Expect(2) = 1e-57
Identities = 102/152 (67%), Positives = 127/152 (83%)
Frame = +1
Query: 96 FEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLL 155
+E+K LAL RM+LS AL+ N+E + ++ VL D+MKH+L+L KLIMKSQ+ES +LE+KLL
Sbjct: 310 YEMKSLALSRMKLSVALQDNMENMGPENCVLTDDMKHILKLQKLIMKSQEESSELEKKLL 489
Query: 156 DIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHV 215
D+RKKRLQLKQAS SKLLEIQ EKNKQK D+D MENSE IK +++ LQ EIKITTV+QH
Sbjct: 490 DVRKKRLQLKQASRSKLLEIQIEKNKQKEDVDKMENSEMIKTMKKKLQTEIKITTVVQHT 669
Query: 216 FQNLILGSKVNWAEDPALKEIVLQLEKNVDMM 247
FQ LIL SK NWAEDPAL+E VLQLEK+++ +
Sbjct: 670 FQGLILASKTNWAEDPALRETVLQLEKDLNTL 765
Score = 45.4 bits (106), Expect(2) = 1e-57
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = +3
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKV 94
+DR LLLRL+A+T QQL EYK +++ ++K +I ++KQ +KI ENE++ KV
Sbjct: 138 KDRFKLLLRLKAKTXQQL*EYKILINTMKKKLQNRICKKKQ-SSKI*RAENEMKM*KV 308
>dbj|AK010533.1|AK010533 Mus musculus ES cells cDNA, RIKEN full-length enriched library,
clone:2410018A12:ENP, full insert sequence
Length = 1286
Score = 189 bits (480), Expect = 2e-46
Identities = 104/197 (52%), Positives = 142/197 (71%), Gaps = 1/197 (0%)
Frame = +1
Query: 52 QQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRM-RLST 110
+QL ++ + ++ P+ + KQ +I++L V + K LAL ++ +
Sbjct: 295 KQLPGIENFMHKLRKQNPKALENVKQALVEIDNL*G**TNVMIV-NAKGLALKQV*NFES 471
Query: 111 ALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASES 170
AL+ N+E + ++ VL D+MKH+L+L KLIMKSQ+ES +LE+KLLD+RKK+LQLKQAS S
Sbjct: 472 ALRDNMENMGPENCVLTDDMKHILKLQKLIMKSQEESSELEKKLLDVRKKKLQLKQASRS 651
Query: 171 KLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAED 230
KLLEIQ EKNKQK D+D MENSE IK +++ LQ EIKITTV+QH FQ LIL SK NWAED
Sbjct: 652 KLLEIQIEKNKQKEDVDKMENSEMIKTMKKKLQTEIKITTVVQHTFQGLILASKTNWAED 831
Query: 231 PALKEIVLQLEKNVDMM 247
PAL+E VLQLEK+++ +
Sbjct: 832 PALRETVLQLEKDLNTL 882
>dbj|AB055783.1|AB055783 Gallus gallus mRNA for centromere protein H, complete cds
Length = 1482
Score = 127 bits (318), Expect = 1e-27
Identities = 67/169 (39%), Positives = 118/169 (69%)
Frame = +3
Query: 78 IEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELN 137
IE+ E LE E+ +VK AFE K L + R++L AL+K +++ + ++++ M+ +++LN
Sbjct: 234 IESAKETLE-EVGKVKSAFESKALVIKRIQLMDALRKRVKENDGCARLIVETMRDIIKLN 410
Query: 138 KLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKI 197
I+++ Q++ + E L DIR+KR LKQA K L I T K+K ++ M+ +E++K
Sbjct: 411 WEIIQAHQQARVIRENLNDIRRKRYFLKQAEGEKALRIFTTVRKKK-EVVRMKIAEKLKF 587
Query: 198 IRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQLEKNVDM 246
I +N+Q E K+TT++Q++ QN+I+G ++NWA+DP+L+ I+LQLEK++ +
Sbjct: 588 IHRNVQYERKVTTLVQNILQNIIVGCQINWAKDPSLRAIILQLEKDISI 734
>gb|AC022107.8| Homo sapiens chromosome 5 clone CTC-351M12, complete sequence
Length = 122276
Score = 107 bits (266), Expect = 1e-21
Identities = 59/82 (71%), Positives = 65/82 (78%), Gaps = 10/82 (12%)
Frame = +1
Query: 163 QLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQ----- 217
+LKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQ
Sbjct: 113653 ELKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQVTFI* 113832
Query: 218 -----NLILGSKVNWAEDPALK 234
NL+ + V W + +L+
Sbjct: 113833 TSKSFNLVAQAGVKWLDLSSLQ 113898
Score = 64.7 bits (156), Expect = 6e-09
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +1
Query: 217 QNLILGSKVNWAEDPALKEIVLQLEKNVDMM 247
QNLILGSKVNWAEDPALKEIVLQLEKNVDMM
Sbjct: 115162 QNLILGSKVNWAEDPALKEIVLQLEKNVDMM 115254
Score = 62.0 bits (149), Expect = 4e-08
Identities = 31/46 (67%), Positives = 31/46 (67%)
Frame = +2
Query: 1 MEEQPQMQDADEPADSGGEXXXXXXXXXXXXXXXCSEDRMTLLLRL 46
MEEQPQMQDADEPADSGGE CSEDRMTLLLRL
Sbjct: 95093 MEEQPQMQDADEPADSGGEGRAGGPPQVAGAQAACSEDRMTLLLRL 95230
Score = 51.6 bits (122), Expect = 6e-05
Identities = 25/27 (92%), Positives = 27/27 (99%)
Frame = +1
Query: 79 EAKIEDLENEIEEVKVAFEIKKLALDR 105
++KIEDLENEIEEVKVAFEIKKLALDR
Sbjct: 101170 DSKIEDLENEIEEVKVAFEIKKLALDR 101250
Score = 45.8 bits (107), Expect = 0.003
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +1
Query: 124 SVLMDNMKHLLELNKLIMKSQQ 145
SVLMDNMKHLLELNKLIMKSQQ
Sbjct: 107962 SVLMDNMKHLLELNKLIMKSQQ 108027
Score = 42.0 bits (97), Expect = 0.044
Identities = 20/23 (86%), Positives = 22/23 (94%)
Frame = +3
Query: 43 LLRLRAQTKQQLLEYKSMVDASE 65
+ RLRAQTKQQLLEYKSMVDAS+
Sbjct: 97245 VFRLRAQTKQQLLEYKSMVDASK 97313
Score = 41.2 bits (95), Expect = 0.075
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 145 QESWDLEEKLLDIRKKRLQL 164
QESWDLEEKLLDIRKKRL++
Sbjct: 108374 QESWDLEEKLLDIRKKRLRM 108433
Score = 39.3 bits (90), Expect = 0.29
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 52 QQLLEYKSMVDASEEKTPEQIMQEKQIEAKI 82
+ L+ K+ + A EEKTPEQIMQEKQIEA +
Sbjct: 100068 KMLVTSKNYLFAGEEKTPEQIMQEKQIEAYV 100160
Score = 38.5 bits (88), Expect = 0.49
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 105 RMRLSTALKKNLEKISRQS 123
RMRLSTALKKNLEKISRQS
Sbjct: 102509 RMRLSTALKKNLEKISRQS 102565
>gb|L26956.1|HAMFAR Mesocricetus auratus stearyl-CoA desaturase (FAR-17c) mRNA, complete
cds
Length = 2805
Score = 95.1 bits (235), Expect = 4e-18
Identities = 50/76 (65%), Positives = 60/76 (78%)
Frame = +1
Query: 169 ESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWA 228
++ L IQTEK+KQK DLD+MENSE IK +++ KITTVIQHVFQ LILGSK NWA
Sbjct: 1336 KANLSFIQTEKSKQKKDLDNMENSEVIKTMQKKAADGDKITTVIQHVFQGLILGSKTNWA 1515
Query: 229 EDPALKEIVLQLEKNV 244
ED L+EIVLQLEK++
Sbjct: 1516 EDSGLREIVLQLEKDL 1563
>dbj|AK027705.1|AK027705 Homo sapiens cDNA FLJ14799 fis, clone NT2RP4001351, weakly similar
to Human ovarian cancer downregulated myosin heavy chain
homolog (Doc1) mRNA
Length = 3559
Score = 57.0 bits (136), Expect = 1e-06
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 24/230 (10%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQ-----EKQIEAKIEDLENEIEE 91
E+ + LRL + Q+ + ++ + K+ + Q EK+ + +DL NE+E
Sbjct: 559 EEHHSKELRLEVEKLQKRMSELEKLEEAFSKSKSECTQLHLNLEKE-KNLTKDLLNELEV 735
Query: 92 VKVAFEIKKLALDRMRLSTA---LKKNLEKISRQSSVLMDNMKHLLE-----------LN 137
VK +K+L RL A LK +L K+ + +L+D K+++E LN
Sbjct: 736 VKS--RVKELECSESRLEKAELSLKDDLTKLKSFTVMLVDERKNMMEKIKQEERKVDGLN 909
Query: 138 KLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKI 197
K Q + D+ EKL++ KK L+LK E K+ + E+++ L S E E+
Sbjct: 910 KNFKVEQGKVMDVTEKLIEESKKLLKLKSEMEEKVYNLTRERDELIGKLKSEE--EKSSE 1083
Query: 198 IRQNLQMEIKITTVIQHVFQNLI-----LGSKVNWAEDPALKEIVLQLEK 242
+ ++ + K I+ V + + GS++ ED +KE+ L++E+
Sbjct: 1084LSCSVDLLKKRLDGIEEVEREITRGRSRKGSELTCPEDNKIKELTLEIER 1233
>emb|AL589649.4|AL589649 Human DNA sequence from clone RP11-264J13 on chromosome 6, complete
sequence [Homo sapiens]
Length = 44768
Score = 57.0 bits (136), Expect = 1e-06
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 24/230 (10%)
Frame = -2
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQ-----EKQIEAKIEDLENEIEE 91
E+ + LRL + Q+ + ++ + K+ + Q EK+ + +DL NE+E
Sbjct: 7648 EEHHSKELRLEVEKLQKRMSELEKLEEAFSKSKSECTQLHLNLEKE-KNLTKDLLNELEV 7472
Query: 92 VKVAFEIKKLALDRMRLSTA---LKKNLEKISRQSSVLMDNMKHLLE-----------LN 137
VK +K+L RL A LK +L K+ + +L+D K+++E LN
Sbjct: 7471 VKS--RVKELECSESRLEKAELSLKDDLTKLKSFTVMLVDERKNMMEKIKQEERKVDGLN 7298
Query: 138 KLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKI 197
K Q + D+ EKL++ KK L+LK E K+ + E+++ L S E E+
Sbjct: 7297 KNFKVEQGKVMDVTEKLIEESKKLLKLKSEMEEKVYNLTRERDELIGKLKSEE--EKSSE 7124
Query: 198 IRQNLQMEIKITTVIQHVFQNLI-----LGSKVNWAEDPALKEIVLQLEK 242
+ ++ + K I+ V + + GS++ ED +KE+ L++E+
Sbjct: 7123 LSCSVDLLKKRLDGIEEVEREITRGRSRKGSELTCPEDNKIKELTLEIER 6974
>ref|XM_029179.1| Homo sapiens KIAA1275 protein (KIAA1275), mRNA
Length = 4051
Score = 57.0 bits (136), Expect = 1e-06
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 24/230 (10%)
Frame = +3
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQ-----EKQIEAKIEDLENEIEE 91
E+ + LRL + Q+ + ++ + K+ + Q EK+ + +DL NE+E
Sbjct: 1050 EEHHSKELRLEVEKLQKRMSELEKLEEAFSKSKSECTQLHLNLEKE-KNLTKDLLNELEV 1226
Query: 92 VKVAFEIKKLALDRMRLSTA---LKKNLEKISRQSSVLMDNMKHLLE-----------LN 137
VK +K+L RL A LK +L K+ + +L+D K+++E LN
Sbjct: 1227 VKS--RVKELECSESRLEKAELSLKDDLTKLKSFTVMLVDERKNMMEKIKQEERKVDGLN 1400
Query: 138 KLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKI 197
K Q + D+ EKL++ KK L+LK E K+ + E+++ L S E E+
Sbjct: 1401 KNFKVEQGKVMDVTEKLIEESKKLLKLKSEMEEKVYNLTRERDELIGKLKSEE--EKSSE 1574
Query: 198 IRQNLQMEIKITTVIQHVFQNLI-----LGSKVNWAEDPALKEIVLQLEK 242
+ ++ + K I+ V + + GS++ ED +KE+ L++E+
Sbjct: 1575 LSCSVDLLKKRLDGIEEVEREITRGRSRKGSELTCPEDNKIKELTLEIER 1724
>dbj|AB033101.1|AB033101 Homo sapiens mRNA for KIAA1275 protein, partial cds
Length = 4051
Score = 57.0 bits (136), Expect = 1e-06
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 24/230 (10%)
Frame = +3
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQ-----EKQIEAKIEDLENEIEE 91
E+ + LRL + Q+ + ++ + K+ + Q EK+ + +DL NE+E
Sbjct: 1050 EEHHSKELRLEVEKLQKRMSELEKLEEAFSKSKSECTQLHLNLEKE-KNLTKDLLNELEV 1226
Query: 92 VKVAFEIKKLALDRMRLSTA---LKKNLEKISRQSSVLMDNMKHLLE-----------LN 137
VK +K+L RL A LK +L K+ + +L+D K+++E LN
Sbjct: 1227 VKS--RVKELECSESRLEKAELSLKDDLTKLKSFTVMLVDERKNMMEKIKQEERKVDGLN 1400
Query: 138 KLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKI 197
K Q + D+ EKL++ KK L+LK E K+ + E+++ L S E E+
Sbjct: 1401 KNFKVEQGKVMDVTEKLIEESKKLLKLKSEMEEKVYNLTRERDELIGKLKSEE--EKSSE 1574
Query: 198 IRQNLQMEIKITTVIQHVFQNLI-----LGSKVNWAEDPALKEIVLQLEK 242
+ ++ + K I+ V + + GS++ ED +KE+ L++E+
Sbjct: 1575 LSCSVDLLKKRLDGIEEVEREITRGRSRKGSELTCPEDNKIKELTLEIER 1724
>ref|NM_017571.1| Homo sapiens hypothetical protein (LOC55580), mRNA
Length = 3109
Score = 51.6 bits (122), Expect = 6e-05
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
Frame = +3
Query: 56 EYKSMVDASEEKTPEQIMQEKQ---IEAKIEDLENEIEEVKVAFE-IKKLALDRMRLSTA 111
E ++ VD+ E + + EK+ + K+E LENEI + K + + + L+ D M+
Sbjct: 1965 ELRTTVDSVEGNASKILKMEKENQRLSKKVEILENEIVQEKQSLQNCQNLSKDLMKEKAQ 2144
Query: 112 LKKNLEKI----SRQSSVLMDNMKHLLELNKLIMKSQQESW-DLEEKLLDIRKKRLQLKQ 166
L+K +E + RQ +L +H LN+ + +Q S E ++ DI K+ L +
Sbjct: 2145 LEKTIETLRENSERQIKILEQENEH---LNQTVSSLRQRSQISAEARVKDIEKENKILHE 2315
Query: 167 A---SESKLLEIQTEKNKQKIDLDS-MENSERIKIIRQNLQMEIKITTVIQHVFQNLILG 222
+ + SKL +I+ EK + K +L+ E ER + + L K ++Q NL
Sbjct: 2316 SIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEKENELLQKKITNL--- 2486
Query: 223 SKVNWAEDPALKEIVLQLEK 242
K+ + AL++ +LE+
Sbjct: 2487 -KITCEKIEALEQENSELER 2543
Score = 38.1 bits (87), Expect = 0.64
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 24/183 (13%)
Frame = +3
Query: 47 RAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEA-------------KIEDLENEIEEVK 93
+ Q K++L YK + +EE E EK+ E KIE LE E E
Sbjct: 2361 KRQIKKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEALEQENSE-- 2534
Query: 94 VAFEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHL-LELNKLIMKSQQESWDLEE 152
LE+ +R+ +D+ K+L +L L ++E+ L+E
Sbjct: 2535 ----------------------LERENRKLKKTLDSFKNLTFQLESL----EKENSQLDE 2636
Query: 153 KLLDIRKKRLQLKQAS--------ESKLLEIQTEKNKQKIDL--DSMENSERIKIIRQNL 202
+ L++R+ LK AS E+K LE + E+ K+ ++L S + +ER+++ Q L
Sbjct: 2637 ENLELRRNVESLKCASMKMAQLQLENKELESEKEQLKKGLELLKASFKKTERLEVSYQGL 2816
Query: 203 QME 205
+E
Sbjct: 2817 DIE 2825
>gb|AF112218.1|AF112218 Homo sapiens unknown mRNA
Length = 3109
Score = 51.6 bits (122), Expect = 6e-05
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
Frame = +3
Query: 56 EYKSMVDASEEKTPEQIMQEKQ---IEAKIEDLENEIEEVKVAFE-IKKLALDRMRLSTA 111
E ++ VD+ E + + EK+ + K+E LENEI + K + + + L+ D M+
Sbjct: 1965 ELRTTVDSVEGNASKILKMEKENQRLSKKVEILENEIVQEKQSLQNCQNLSKDLMKEKAQ 2144
Query: 112 LKKNLEKI----SRQSSVLMDNMKHLLELNKLIMKSQQESW-DLEEKLLDIRKKRLQLKQ 166
L+K +E + RQ +L +H LN+ + +Q S E ++ DI K+ L +
Sbjct: 2145 LEKTIETLRENSERQIKILEQENEH---LNQTVSSLRQRSQISAEARVKDIEKENKILHE 2315
Query: 167 A---SESKLLEIQTEKNKQKIDLDS-MENSERIKIIRQNLQMEIKITTVIQHVFQNLILG 222
+ + SKL +I+ EK + K +L+ E ER + + L K ++Q NL
Sbjct: 2316 SIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEKENELLQKKITNL--- 2486
Query: 223 SKVNWAEDPALKEIVLQLEK 242
K+ + AL++ +LE+
Sbjct: 2487 -KITCEKIEALEQENSELER 2543
Score = 38.1 bits (87), Expect = 0.64
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 24/183 (13%)
Frame = +3
Query: 47 RAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEA-------------KIEDLENEIEEVK 93
+ Q K++L YK + +EE E EK+ E KIE LE E E
Sbjct: 2361 KRQIKKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEALEQENSE-- 2534
Query: 94 VAFEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHL-LELNKLIMKSQQESWDLEE 152
LE+ +R+ +D+ K+L +L L ++E+ L+E
Sbjct: 2535 ----------------------LERENRKLKKTLDSFKNLTFQLESL----EKENSQLDE 2636
Query: 153 KLLDIRKKRLQLKQAS--------ESKLLEIQTEKNKQKIDL--DSMENSERIKIIRQNL 202
+ L++R+ LK AS E+K LE + E+ K+ ++L S + +ER+++ Q L
Sbjct: 2637 ENLELRRNVESLKCASMKMAQLQLENKELESEKEQLKKGLELLKASFKKTERLEVSYQGL 2816
Query: 203 QME 205
+E
Sbjct: 2817 DIE 2825
>dbj|D64159.1|HUM37 Homo sapiens mRNA for 3-7 gene product, partial cds
Length = 2886
Score = 51.6 bits (122), Expect = 6e-05
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
Frame = +3
Query: 56 EYKSMVDASEEKTPEQIMQEKQ---IEAKIEDLENEIEEVKVAFE-IKKLALDRMRLSTA 111
E ++ VD+ E + + EK+ + K+E LENEI + K + + + L+ D M+
Sbjct: 1965 ELRTTVDSVEGNASKILKMEKENQRLSKKVEILENEIVQEKQSLQNCQNLSKDLMKEKAQ 2144
Query: 112 LKKNLEKI----SRQSSVLMDNMKHLLELNKLIMKSQQESW-DLEEKLLDIRKKRLQLKQ 166
L+K +E + RQ +L +H LN+ + +Q S E ++ DI K+ L +
Sbjct: 2145 LEKTIETLRENSERQIKILEQENEH---LNQTVSSLRQRSQISAEARVKDIEKENKILHE 2315
Query: 167 A---SESKLLEIQTEKNKQKIDLDS-MENSERIKIIRQNLQMEIKITTVIQHVFQNLILG 222
+ + SKL +I+ EK + K +L+ E ER + + L K ++Q NL
Sbjct: 2316 SIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEKENELLQKKITNL--- 2486
Query: 223 SKVNWAEDPALKEIVLQLEK 242
K+ + AL++ +LE+
Sbjct: 2487 -KITCEKIEALEQENSELER 2543
Score = 38.1 bits (87), Expect = 0.64
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 24/183 (13%)
Frame = +3
Query: 47 RAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEA-------------KIEDLENEIEEVK 93
+ Q K++L YK + +EE E EK+ E KIE LE E E
Sbjct: 2361 KRQIKKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEALEQENSE-- 2534
Query: 94 VAFEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHL-LELNKLIMKSQQESWDLEE 152
LE+ +R+ +D+ K+L +L L ++E+ L+E
Sbjct: 2535 ----------------------LERENRKLKKTLDSFKNLTFQLESL----EKENSQLDE 2636
Query: 153 KLLDIRKKRLQLKQAS--------ESKLLEIQTEKNKQKIDL--DSMENSERIKIIRQNL 202
+ L++R+ LK AS E+K LE + E+ K+ ++L S + +ER+++ Q L
Sbjct: 2637 ENLELRRNVESLKCASMKMAQLQLENKELESEKEQLKKGLELLKASFKKTERLEVSYQGL 2816
Query: 203 QME 205
+E
Sbjct: 2817 DIE 2825
>ref|XM_048095.4| Homo sapiens hypothetical protein (LOC55580), mRNA
Length = 3091
Score = 51.6 bits (122), Expect = 6e-05
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
Frame = +1
Query: 56 EYKSMVDASEEKTPEQIMQEKQ---IEAKIEDLENEIEEVKVAFE-IKKLALDRMRLSTA 111
E ++ VD+ E + + EK+ + K+E LENEI + K + + + L+ D M+
Sbjct: 1966 ELRTTVDSVEGNASKILKMEKENQRLSKKVEILENEIVQEKQSLQNCQNLSKDLMKEKAQ 2145
Query: 112 LKKNLEKI----SRQSSVLMDNMKHLLELNKLIMKSQQESW-DLEEKLLDIRKKRLQLKQ 166
L+K +E + RQ +L +H LN+ + +Q S E ++ DI K+ L +
Sbjct: 2146 LEKTIETLRENSERQIKILEQENEH---LNQTVSSLRQRSQISAEARVKDIEKENKILHE 2316
Query: 167 A---SESKLLEIQTEKNKQKIDLDS-MENSERIKIIRQNLQMEIKITTVIQHVFQNLILG 222
+ + SKL +I+ EK + K +L+ E ER + + L K ++Q NL
Sbjct: 2317 SIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEKENELLQKKITNL--- 2487
Query: 223 SKVNWAEDPALKEIVLQLEK 242
K+ + AL++ +LE+
Sbjct: 2488 -KITCEKIEALEQENSELER 2544
Score = 39.7 bits (91), Expect = 0.22
Identities = 57/224 (25%), Positives = 108/224 (47%), Gaps = 27/224 (12%)
Frame = +1
Query: 47 RAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEA-------------KIEDLENEIEEVK 93
+ Q K++L YK + +EE E EK+ E KIE LE E E++
Sbjct: 2362 KRQIKKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEALEQENSELE 2541
Query: 94 VAFEIKKLALDRMRLSTALKKNLEK----ISRQSSVLMDNMKHLLELNKLIMKSQQESWD 149
K LD + T ++LEK + ++ L N++ L + + + Q E+ +
Sbjct: 2542 RENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKMAQLQLENKE 2721
Query: 150 LEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLD------SMENS-ERIKIIRQNL 202
LE + + KK L+L +AS K + E + Q +D++ ++ENS ++I+ + L
Sbjct: 2722 LESEKEQL-KKGLELLKASFKKTERL--EVSYQGLDIENQRLQKTLENSNKKIQQLESEL 2892
Query: 203 Q-MEIKITTVIQHVFQNLILGSKVNW--AEDPALKEIVLQLEKN 243
Q +E++ T+ +++ + I ++ E+ +L++ QLEK+
Sbjct: 2893 QDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKD 3024
>dbj|AB015484.1|AB015484 Dugesia japonica mRNA for myosin heavy chain, complete cds
Length = 6029
Score = 49.3 bits (116), Expect = 3e-04
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Frame = +2
Query: 44 LRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEE------------ 91
L L+ QT+Q S+ DA EEK + +MQ+ +E++I++LE+ + E
Sbjct: 2678 LFLQLQTEQD-----SLADA-EEKVSKLVMQKADMESRIKELEDHLLEEEDASAGLEEMK 2839
Query: 92 VKVAFEIKKLALDRMRLSTALKK-NLEKISR--QSSVLMDNM-KHLLELNKLIMKSQQES 147
K+ EI++L D + L ++L+K EK ++ Q L D + + E+NK MK ++++
Sbjct: 2840 KKMQGEIEELKKDVVDLESSLQKAEQEKTAKDQQIKALQDQIARQEEEMNK--MKKEKKA 3013
Query: 148 WDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIK 207
D +++KK + QA E K+ + K K + +D ME +NL E K
Sbjct: 3014 AD------ELQKKTEESLQAEEEKVKNLNKAKAKLEQTIDEME---------ENLSREQK 3148
Query: 208 ITTVIQHVFQNLILGSKVNWAEDPALKEIVLQLEKNV 244
+ ++ V + + K L+ + +LE+ +
Sbjct: 3149 VRADVEKVKRKIETELKQTQETVDDLERVKRELEEQL 3259
>dbj|AP000988.1|AP000988 Sulfolobus tokodaii genomic DNA, complete sequence, section:8/10
Length = 266050
Score = 47.4 bits (111), Expect = 0.001
Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 14/147 (9%)
Frame = +3
Query: 72 IMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMK 131
+ Q++++ +IE++ENEIE + + E K + L + LK E+ + V + ++
Sbjct: 252882 LTQQQELRKEIEEIENEIERLSIYHE-KYIRLKEEEKN--LKPKYEEYLKYYDVTEEKIR 253052
Query: 132 HL----LELNK---LIMKSQQESW--DLEEKLLDIRKKRLQLKQASESKLLEIQT----- 177
L +EL K IM +E + DL +K+ DI +KR+Q + E+KL E+ T
Sbjct: 253053 ELERQKIELEKEIEEIMNKVREYYNTDLTQKIRDI-EKRIQEIKGKENKLRELDTLLAKI 253229
Query: 178 EKNKQKIDLDSMENSERIKIIRQNLQM 204
E KQKI +N E IK + LQ+
Sbjct: 253230 ETAKQKI----KQNEEEIKKLTDELQL 253298
Score = 40.0 bits (92), Expect = 0.17
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Frame = +3
Query: 76 KQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKK----NLEKISRQSSVLMDNMK 131
+ E KIE+LE + + EI+K + + +KK N +KI R+ +D K
Sbjct: 65064 QSFEKKIEELERSLRD-----EIRKTREELLTNDDKIKKEVIENDDKIKRELIEYVDKNK 65228
Query: 132 HLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMEN 191
E+ + + KS++E + +EK ++K+ ++ + +LLE N ++I + +EN
Sbjct: 65229 K--EIIEYVDKSKKELLENDEK---VKKEIIEYVNGVKKELLE-----NDERIKKELLEN 65378
Query: 192 SERIK 196
ERIK
Sbjct: 65379 DERIK 65393
>gb|AF212149.1|AF212149 Oryctolagus cuniculus skeletal muscle myosin heavy chain MyHC-EO/IIL
(MYH13) mRNA, complete cds, alternatively spliced
Length = 5997
Score = 47.0 bits (110), Expect = 0.001
Identities = 44/174 (25%), Positives = 88/174 (50%), Gaps = 11/174 (6%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L+++ A+ +QQ + + ++ QEK++ A +E ++ ++E ++K+A
Sbjct: 3145 EDKVNGLIKINAKLEQQTDDLEGSLE-----------QEKKLRADLERVKRKLEGDLKMA 3291
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+ ++ LKK +IS+ + + D L+L K I + Q + +LEE++
Sbjct: 3292 QESIMDLENDKQQVEEKLKKKEFEISQLQTKIDDEQVQSLQLQKKIKELQARTEELEEEI 3471
Query: 155 -------LDIRKKRLQLKQASE--SKLLEIQTEKNKQKIDLDSMENSERIKIIR 199
I K+R L + E S+ LE + +I+++ +E K+ R
Sbjct: 3472 EAEHTLRAKIEKQRSDLARELEEISERLEEASGATSAQIEMNKKREAEFQKLRR 3633
>gb|AF212147.1|AF212147 Oryctolagus cuniculus skeletal muscle myosin heavy chain MyHC-EO/IIL
(MYH13) mRNA, complete cds, alternatively spliced
Length = 6069
Score = 47.0 bits (110), Expect = 0.001
Identities = 44/174 (25%), Positives = 88/174 (50%), Gaps = 11/174 (6%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L+++ A+ +QQ + + ++ QEK++ A +E ++ ++E ++K+A
Sbjct: 3217 EDKVNGLIKINAKLEQQTDDLEGSLE-----------QEKKLRADLERVKRKLEGDLKMA 3363
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+ ++ LKK +IS+ + + D L+L K I + Q + +LEE++
Sbjct: 3364 QESIMDLENDKQQVEEKLKKKEFEISQLQTKIDDEQVQSLQLQKKIKELQARTEELEEEI 3543
Query: 155 -------LDIRKKRLQLKQASE--SKLLEIQTEKNKQKIDLDSMENSERIKIIR 199
I K+R L + E S+ LE + +I+++ +E K+ R
Sbjct: 3544 EAEHTLRAKIEKQRSDLARELEEISERLEEASGATSAQIEMNKKREAEFQKLRR 3705
>gb|U62026.3|GGU62026 Gallus gallus cardiac muscle factor 1 CMF1 mRNA, complete cds
Length = 5550
Score = 47.0 bits (110), Expect = 0.001
Identities = 39/161 (24%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Frame = +3
Query: 52 QQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTA 111
+QL K +A +E + +Q + ++ K+ LE+ I K+ EI+ L + L+ +
Sbjct: 4035 KQLQTEKEHQNALKEANRKNEIQIEVLQEKVNSLESFISSQKL--EIEHLKSTKEELNNS 4208
Query: 112 LKKNLEKISRQSSVLMDNMKHLLELN--KLIMKSQQESWDLEEKLLDIRKKRLQLKQASE 169
LK+ + + + DN+ +++LN K ++S+ + W K ++ K+ LQ + A
Sbjct: 4209 LKEANQTLGDLLKLKADNINTIVQLNKEKEFVQSEVQLWIKSCKQMEQEKEVLQKQLADC 4388
Query: 170 SKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITT 210
+LL+ + +K D +E IK+ + LQ +++ T
Sbjct: 4389 EELLKKKDLSVSEKEGTDENAITEEIKLELEELQEAVEVKT 4511
>gb|BC015539.1|BC015539 Homo sapiens, clone IMAGE:3885871, mRNA
Length = 708
Score = 47.0 bits (110), Expect = 0.001
Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Frame = +1
Query: 56 EYKSMVDASEEKTPEQIMQEKQ---IEAKIEDLENEIEEVKVAFE-IKKLALDRMRLSTA 111
E ++ VD+ E + + EK+ + K+E LENEI + K + + + L+ D M+
Sbjct: 265 ELRTTVDSVEGNASKILKMEKENQRLSKKVEILENEIVQEKQSLQNCQNLSKDLMKEKAQ 444
Query: 112 LKKNLEKI----SRQSSVLMDNMKHLLELNKLIMKSQQESW-DLEEKLLDIRKKRLQLKQ 166
L+K +E + RQ +L +H LN+ + +Q S E ++ DI K+ L +
Sbjct: 445 LEKTIETLRENSERQIKILEQENEH---LNQTVSSLRQRSQISAEARVKDIEKENKILHE 615
Query: 167 A---SESKLLEIQTEKNKQKIDLDSMENSER 194
+ + SKL +I+ EK + K +L+ + ++
Sbjct: 616 SIKETSSKLSKIEFEKRQIKKELEHYKKKKK 708
>gb|AF212148.1|AF212148 Oryctolagus cuniculus skeletal muscle myosin heavy chain MyHC-EO/IIL
(MYH13) mRNA, complete cds, alternatively spliced
Length = 6038
Score = 47.0 bits (110), Expect = 0.001
Identities = 44/174 (25%), Positives = 88/174 (50%), Gaps = 11/174 (6%)
Frame = +3
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L+++ A+ +QQ + + ++ QEK++ A +E ++ ++E ++K+A
Sbjct: 3186 EDKVNGLIKINAKLEQQTDDLEGSLE-----------QEKKLRADLERVKRKLEGDLKMA 3332
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+ ++ LKK +IS+ + + D L+L K I + Q + +LEE++
Sbjct: 3333 QESIMDLENDKQQVEEKLKKKEFEISQLQTKIDDEQVQSLQLQKKIKELQARTEELEEEI 3512
Query: 155 -------LDIRKKRLQLKQASE--SKLLEIQTEKNKQKIDLDSMENSERIKIIR 199
I K+R L + E S+ LE + +I+++ +E K+ R
Sbjct: 3513 EAEHTLRAKIEKQRSDLARELEEISERLEEASGATSAQIEMNKKREAEFQKLRR 3674
>gb|AF041382.1|AF041382 Drosophila melanogaster microtubule binding protein D-CLIP-190 mRNA,
complete cds
Length = 5999
Score = 46.6 bits (109), Expect = 0.002
Identities = 46/188 (24%), Positives = 94/188 (49%), Gaps = 20/188 (10%)
Frame = +3
Query: 36 SEDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVA 95
+E++ TLL +T+++L++ K E+ + + ++Q+E +I DL+ E+ K+
Sbjct: 2628 TEEKSTLL----EKTEKELVQIK-------EQAAKTLQDKEQLEKQISDLKQLAEQEKLV 2774
Query: 96 FEIKKLALDRMRLST-------ALKKN----LEKISRQSSVLMDNMK--------HLLEL 136
E + A+++++L ALK+N +K +S V + +K L+E
Sbjct: 2775 REKTENAINQIQLEKESIEQQLALKQNELEDFQKKQSESEVHLQEIKAQNTQKDLELVES 2954
Query: 137 NKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEI-QTEKNKQKIDLDSMENSERI 195
+ + K QQ+ LEEK L K + L++ + K I + E+ Q++ S E+ +
Sbjct: 2955 GESLKKLQQQ---LEEKTLGHEKLQAALEELKKEKETIIKEKEQELQQLQSKSAESESAL 3125
Query: 196 KIIRQNLQ 203
K+++ L+
Sbjct: 3126 KVVQVQLE 3149
Score = 43.1 bits (100), Expect = 0.020
Identities = 42/199 (21%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Frame = +3
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALD 104
++ ++ Q++ + K++V+A + ++ +E L+ E E FE+ ++ D
Sbjct: 3933 KMASEDAQKIADLKTLVEAIQVANANISATNAELSTVLEVLQAEKSETNHIFELFEMEAD 4112
Query: 105 R-----MRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKS----QQESWDLEEKLL 155
+ T +K+ L++ Q + L E K +S QQES +EKL
Sbjct: 4113 MNSERLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQAQQSEQKLQQESQTSKEKLT 4292
Query: 156 DIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHV 215
+I++ +L+ + + K +Q + K + + S+ ++ K+ N+Q+E K + + +
Sbjct: 4293 EIQQSLQELQDSVKQKEELVQNLEEKVR-ESSSIIEAQNTKLNESNVQLENKTSCLKETQ 4469
Query: 216 FQNLILGSKVNWAEDPALK 234
Q L K ++ A K
Sbjct: 4470 DQLLESQKKEKQLQEEAAK 4526
>ref|NM_069127.1| Caenorhabditis elegans
Length = 6996
Score = 46.6 bits (109), Expect = 0.002
Identities = 45/196 (22%), Positives = 91/196 (45%), Gaps = 8/196 (4%)
Frame = +1
Query: 43 LLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFE--IKK 100
L R A+ + ++ VD +E + +++Q+E +++LE+++ E+ E ++
Sbjct: 4336 LFRTNAELAHTNVRLQNEVDEQDEWKAKIEEEKEQLEQHVKELEDQVAELMEQHETHFRQ 4515
Query: 101 LALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKK 160
L + S+A +N+ K+ + LN I+ + ++ +LEEK ++ +
Sbjct: 4516 AQLLQSATSSANTENISKVHDSEKEVQRLSAIEKILNNRILALEDQNLELEEKYQEMEDE 4695
Query: 161 RLQLKQASESKLLEIQTEKN-----KQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHV 215
L LKQ S K + N +K D ++ E E + + L +E +T ++ +
Sbjct: 4696 MLSLKQDSTKKSEIVAGTSNWEDSWDEKGDENAKELVEARNEVERLLDVEKALTLRMEML 4875
Query: 216 -FQNLILGSKVNWAED 230
QN+ L S+V ED
Sbjct: 4876 QIQNVQLESRVREQED 4923
Score = 36.6 bits (83), Expect = 1.9
Identities = 45/212 (21%), Positives = 94/212 (44%), Gaps = 25/212 (11%)
Frame = +1
Query: 38 DRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEK-QIEAKIEDLENEIEEVKVAF 96
+++T L +QL KS A + Q+ K QIE K+ + E++++K
Sbjct: 5749 EKLTQLRNELTARIEQLESQKSNEQAQMSEKLSQVESMKVQIEQKLYETREELDDLKKEL 5928
Query: 97 EIKKLALDRMR--LSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
++K++ L + +TA + + +D MK ++ ++ +++ Q+ ++L
Sbjct: 5929 KLKEIELQKASEASTTASSEWNDDGWNDDDGEIDRMKDTQKVLEMKVEALQDEL---QRL 6099
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENS--------------ERIKIIRQ 200
D + + A +SKL ++Q+E K L ENS I+ +++
Sbjct: 6100 KDNEIELTETISALQSKLYDVQSELEDTKQKLVEAENSASGWNDDDAWNKNENEIEEVKK 6279
Query: 201 NLQMEI--------KITTVIQHVFQNLILGSK 224
L++EI K+ ++ ++ Q LI S+
Sbjct: 6280 ALEIEISNRNDTIVKLQNLVSNLRQQLIEASE 6375
>gb|U67484.1|U67484 Methanococcus jannaschii section 26 of 150 of the complete genome
Length = 10083
Score = 46.2 bits (108), Expect = 0.002
Identities = 43/159 (27%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Frame = +3
Query: 62 DASEEKTPEQIMQEKQIEA----KIEDLENEIEEVKVAFEIKKLA-LDRMRLSTALKKNL 116
+ +EK E+I + + ++ K+E+ + EI+E+K E KK+ DR L+ A+KK L
Sbjct: 2883 EVKKEKAEEEIKKSEIVKTEPSEKVEEAKEEIKEIKEEKEEKKITFFDRFGLTRAIKKVL 3062
Query: 117 EKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLE-- 174
+K + +L ++++ +LE ++ + + ++ EKL++ K L ++ S +E
Sbjct: 3063 KK---EVVILEEDIEDVLEELEIALLEADVALEVVEKLIENIKNELVGRKISPDDNVEEI 3233
Query: 175 -IQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVI 212
I KN K ++ S E + +II++N + E K T ++
Sbjct: 3234 TINAVKNAIK-NILSQEKIDIEEIIKKN-KAEGKPTVIV 3344
>gb|U51472.2|FCU51472 Felis catus superfast myosin heavy chain (sMyHC) mRNA, complete cds
Length = 6302
Score = 45.4 bits (106), Expect = 0.004
Identities = 42/179 (23%), Positives = 88/179 (48%), Gaps = 16/179 (8%)
Frame = +2
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQI---EAKIEDLENEIEEVKVAFEIKKL 101
RL+A+ + ++ + A+ +Q + +K + + K E+L+ E++ + E +
Sbjct: 4277 RLQAEIEDLTIDLEKANAAAAALDKKQRVFDKMLAEWQQKCEELQVEVDSAQK--ECRMY 4450
Query: 102 ALDRMRLSTALKKNLE---KISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIR 158
+ ++ TA +++LE + +++ L + +K L++ +S E L++KL +I
Sbjct: 4451 MTESFKIKTAYEESLEHLESVKKENKTLQEEIKELIDQLGEGGRSVHELQKLKKKL-EIE 4627
Query: 159 KKRLQLK--------QASESKLLEIQTEKNKQKIDLDSM--ENSERIKIIRQNLQMEIK 207
K+ LQ+ + ESK++ IQ E + K D+D E E + R+N Q I+
Sbjct: 4628 KEELQVALEEAESSLEVEESKVIRIQLELAQVKADIDRRIHEKEEEFEATRKNHQRAIE 4804
Score = 40.8 bits (94), Expect = 0.098
Identities = 37/198 (18%), Positives = 94/198 (46%), Gaps = 28/198 (14%)
Frame = +2
Query: 36 SEDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVA 95
+E+R+T +++ + + + Q+ + + ++ E ++++E ++ DL+ ++E ++
Sbjct: 2720 AEERLTQMMKTKMELESQISDMRERLEEEEGTAASLSATKRKLEGEMSDLKRDLEGLETT 2899
Query: 96 F---EIKKLALD-RMRLSTA----LKKNLEKISRQSSVLM--------------DNMKHL 133
E +K ALD ++R T + ++ K+ ++ L D + HL
Sbjct: 2900 LAKMEKEKQALDHKVRTLTGDLSLREDSIAKLQKEKRALEELHQKTLDDLQAEEDKVNHL 3079
Query: 134 LELNKLI---MKSQQESWDLEEKLLDIRKKRLQLKQASESKL---LEIQTEKNKQKIDLD 187
+ N + + +++W+ E+K IR + + ++ +ES L ++ E + K+DL+
Sbjct: 3080 TKTNSKLSTQIHELEDNWEQEKK---IRAEVEKARRKAESDLKITIDNLNEMERSKLDLE 3250
Query: 188 SMENSERIKIIRQNLQME 205
+ ++I N + E
Sbjct: 3251 EVVKKRDMEINSVNSKYE 3304
>ref|NM_010856.1| Mus musculus myosin heavy chain, cardiac muscle, adult (Myhca), mRNA
Length = 5817
Score = 45.4 bits (106), Expect = 0.004
Identities = 43/185 (23%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+
Sbjct: 3046 EDKVNTLTKSKVKLEQQVDDLEGSLE-----------QEKKVRMDLERAKRKLEGDLKLT 3192
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+++L LKK IS+Q+S + D L+L K + ++Q +LEE+L
Sbjct: 3193 QESIMDLENDKLQLEEKLKKKEFDISQQNSKIEDEQALALQLQKKLKENQARIEELEEEL 3372
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
R R ++ EK + + + E SER++ ++I++ +
Sbjct: 3373 EAERTARAKV-------------EKLRSDLSRELEEISERLEEAGGATSVQIEMNKKREA 3513
Query: 215 VFQNL 219
FQ +
Sbjct: 3514 EFQKM 3528
>gb|M76600.1|MUSACMHCC Mouse alpha cardiac myosin heavy chain mRNA, complete cds
Length = 5817
Score = 45.4 bits (106), Expect = 0.004
Identities = 43/185 (23%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+
Sbjct: 3046 EDKVNTLTKSKVKLEQQVDDLEGSLE-----------QEKKVRMDLERAKRKLEGDLKLT 3192
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+++L LKK IS+Q+S + D L+L K + ++Q +LEE+L
Sbjct: 3193 QESIMDLENDKLQLEEKLKKKEFDISQQNSKIEDEQALALQLQKKLKENQARIEELEEEL 3372
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
R R ++ EK + + + E SER++ ++I++ +
Sbjct: 3373 EAERTARAKV-------------EKLRSDLSRELEEISERLEEAGGATSVQIEMNKKREA 3513
Query: 215 VFQNL 219
FQ +
Sbjct: 3514 EFQKM 3528
>gb|M76599.1|MUSACMHCB Mouse alpha cardiac myosin heavy chain mRNA, complete cds
Length = 5817
Score = 45.4 bits (106), Expect = 0.004
Identities = 43/185 (23%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+
Sbjct: 3046 EDKVNTLTKSKVKLEQQVDDLEGSLE-----------QEKKVRMDLERAKRKLEGDLKLT 3192
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+++L LKK IS+Q+S + D L+L K + ++Q +LEE+L
Sbjct: 3193 QESIMDLENDKLQLEEKLKKKEFDISQQNSKIEDEQALALQLQKKLKENQARIEELEEEL 3372
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
R R ++ EK + + + E SER++ ++I++ +
Sbjct: 3373 EAERTARAKV-------------EKLRSDLSRELEEISERLEEAGGATSVQIEMNKKREA 3513
Query: 215 VFQNL 219
FQ +
Sbjct: 3514 EFQKM 3528
>gb|M76598.1|MUSACMHCA Mouse alpha cardiac myosin heavy chain mRNA, complete cds
Length = 5817
Score = 45.4 bits (106), Expect = 0.004
Identities = 43/185 (23%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+
Sbjct: 3046 EDKVNTLTKSKVKLEQQVDDLEGSLE-----------QEKKVRMDLERAKRKLEGDLKLT 3192
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+++L LKK IS+Q+S + D L+L K + ++Q +LEE+L
Sbjct: 3193 QESIMDLENDKLQLEEKLKKKEFDISQQNSKIEDEQALALQLQKKLKENQARIEELEEEL 3372
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
R R ++ EK + + + E SER++ ++I++ +
Sbjct: 3373 EAERTARAKV-------------EKLRSDLSRELEEISERLEEAGGATSVQIEMNKKREA 3513
Query: 215 VFQNL 219
FQ +
Sbjct: 3514 EFQKM 3528
>gb|M76601.1|MUSACMHCD Mouse alpha cardiac myosin heavy chain mRNA, complete cds
Length = 5989
Score = 45.4 bits (106), Expect = 0.004
Identities = 43/185 (23%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+
Sbjct: 3148 EDKVNTLTKSKVKLEQQVDDLEGSLE-----------QEKKVRMDLERAKRKLEGDLKLT 3294
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+++L LKK IS+Q+S + D L+L K + ++Q +LEE+L
Sbjct: 3295 QESIMDLENDKLQLEEKLKKKEFDISQQNSKIEDEQALALQLQKKLKENQARIEELEEEL 3474
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
R R ++ EK + + + E SER++ ++I++ +
Sbjct: 3475 EAERTARAKV-------------EKLRSDLSRELEEISERLEEAGGATSVQIEMNKKREA 3615
Query: 215 VFQNL 219
FQ +
Sbjct: 3616 EFQKM 3630
>ref|NM_017239.1| Rattus norvegicus myosin heavy chain, cardiac muscle, adult (Myh6),
mRNA
Length = 5930
Score = 45.4 bits (106), Expect = 0.004
Identities = 35/142 (24%), Positives = 73/142 (50%), Gaps = 2/142 (1%)
Frame = +2
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+
Sbjct: 3080 EDKVNTLTKSKVKLEQQVDDLEGSLE-----------QEKKVRMDLERAKRKLEGDLKLT 3226
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+++L LKK IS+Q+S + D L+L K + ++Q +LEE+L
Sbjct: 3227 QESIMDLENDKLQLEEKLKKKEFDISQQNSKIEDEQALALQLQKKLKENQARIEELEEEL 3406
Query: 155 LDIRKKRLQLKQASESKLLEIQ 176
R R ++++ E++
Sbjct: 3407 EAERTARAKVEKLRSDLTRELE 3472
Score = 35.8 bits (81), Expect = 3.2
Identities = 39/152 (25%), Positives = 76/152 (49%), Gaps = 5/152 (3%)
Frame = +2
Query: 61 VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLE--- 117
+ A E+K + ++E +++DLE +E+ K RM L A K+ LE
Sbjct: 3068 LQAEEDKVNTLTKSKVKLEQQVDDLEGSLEQEKKV---------RMDLERA-KRKLEGDL 3217
Query: 118 KISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQT 177
K++++S + ++N K L+L + + K + + K+ D + LQL + KL E Q
Sbjct: 3218 KLTQESIMDLENDK--LQLEEKLKKKEFDISQQNSKIEDEQALALQL----QKKLKENQA 3379
Query: 178 EKNKQKIDLDSMENSERIKI--IRQNLQMEIK 207
+ + +L++ E + R K+ +R +L E++
Sbjct: 3380 RIEELEEELEA-ERTARAKVEKLRSDLTRELE 3472
>emb|X15938.1|RNMHCA Rat mRNA for alpha cardiac myosin heavy chain
Length = 5930
Score = 45.4 bits (106), Expect = 0.004
Identities = 35/142 (24%), Positives = 73/142 (50%), Gaps = 2/142 (1%)
Frame = +2
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+
Sbjct: 3080 EDKVNTLTKSKVKLEQQVDDLEGSLE-----------QEKKVRMDLERAKRKLEGDLKLT 3226
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+++L LKK IS+Q+S + D L+L K + ++Q +LEE+L
Sbjct: 3227 QESIMDLENDKLQLEEKLKKKEFDISQQNSKIEDEQALALQLQKKLKENQARIEELEEEL 3406
Query: 155 LDIRKKRLQLKQASESKLLEIQ 176
R R ++++ E++
Sbjct: 3407 EAERTARAKVEKLRSDLTRELE 3472
Score = 35.8 bits (81), Expect = 3.2
Identities = 39/152 (25%), Positives = 76/152 (49%), Gaps = 5/152 (3%)
Frame = +2
Query: 61 VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLE--- 117
+ A E+K + ++E +++DLE +E+ K RM L A K+ LE
Sbjct: 3068 LQAEEDKVNTLTKSKVKLEQQVDDLEGSLEQEKKV---------RMDLERA-KRKLEGDL 3217
Query: 118 KISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQT 177
K++++S + ++N K L+L + + K + + K+ D + LQL + KL E Q
Sbjct: 3218 KLTQESIMDLENDK--LQLEEKLKKKEFDISQQNSKIEDEQALALQL----QKKLKENQA 3379
Query: 178 EKNKQKIDLDSMENSERIKI--IRQNLQMEIK 207
+ + +L++ E + R K+ +R +L E++
Sbjct: 3380 RIEELEEELEA-ERTARAKVEKLRSDLTRELE 3472
>ref|NM_012604.1| Rattus norvegicus Myosin, heavy polypeptide 3, skeletal muscle,
embryonic (Myh3), mRNA
Length = 6035
Score = 45.1 bits (105), Expect = 0.005
Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L +L+++ +QQ+ + +S ++ QEK++ +E + ++E ++K+A
Sbjct: 3133 EDKVNSLSKLKSKLEQQVDDLESSLE-----------QEKKLRVDLERNKRKLEGDLKLA 3279
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+ +L LKK + S+ S + D L+L K I + Q +LEE++
Sbjct: 3280 QESILDLENDKQQLDERLKKKDFEYSQLQSKVEDEQTLSLQLQKKIKELQARIEELEEEI 3459
Query: 155 LDIRKKRLQL-KQASE--------SKLLEIQTEKNKQKIDLDSMENSERIKIIRQ----N 201
R R + KQ S+ S+ LE +I+L+ +E +K+ R
Sbjct: 3460 EAERATRAKTEKQRSDYARELEELSERLEEAGGVTSTQIELNKKREAEFLKLRRDLEEAT 3639
Query: 202 LQMEIKITTV 211
LQ E + T+
Sbjct: 3640 LQHEATVATL 3669
Score = 34.7 bits (78), Expect = 7.0
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Frame = +1
Query: 53 QLLEYKSMVDASEEKTPEQIMQEKQ-----IEAKIEDLENEIEEVKVAFEIKK-----LA 102
+L + KS +D + E+I Q K+ +E L+ E+ A +KK L
Sbjct: 4783 ELTQVKSEIDRKIAEKDEEIEQLKRNYQRTVETMQGALDAEVRSRNEAIRLKKKMEGDLN 4962
Query: 103 LDRMRLSTALKKNLEKISRQSSV---LMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
++LS A ++ E I SV L D HL + ++ Q+ DL+E+L I +
Sbjct: 4963 EIEIQLSHANRQAAETIKHLRSVQGQLKDTQLHLDDA----LRGQE---DLKEQLA-IVE 5118
Query: 160 KRLQLKQASESKLLEI--QTEKNKQKIDLDSMENSERIKII 198
+R L QA +L QTE+ ++ + + ++++ER++++
Sbjct: 5119 RRANLLQAEVEELRATLEQTERARKLAEQELLDSNERVQLL 5241
>gb|AF347076.1|AF347076 Gallus gallus Rho-associated coiled coil forming kinase 2 mRNA,
partial cds
Length = 2138
Score = 45.1 bits (105), Expect = 0.005
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 22/192 (11%)
Frame = +1
Query: 73 MQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKH 132
M+++Q++ K+ DLE E +++ K +++NLE+ + +
Sbjct: 1333 MEKRQLQEKLTDLEKEKSNMEIDMTYK---------FKVMQQNLEQEEAEHKATKARLAD 1485
Query: 133 LLELNKLIMKSQQESW-DLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMEN 191
++ + I +++ E+ ++E+KLL+ R LKQ E++LLE EK + +D D ++
Sbjct: 1486 KNKIYESIEEAKSEAMKEMEKKLLEERA----LKQKVENRLLE--AEKQRSMLDCDLKQS 1647
Query: 192 SERI-KIIRQ---------NLQMEIKITTVIQHVFQN-----------LILGSKVNWAED 230
++I +++RQ NL ++I+ T + + QN L + K E+
Sbjct: 1648 QQKINELLRQKDKLNEDVKNLTLKIEQETQKRCLTQNDLKMQTQQVNTLKMSEKQLKQEN 1827
Query: 231 PALKEIVLQLEK 242
L+EI L LEK
Sbjct: 1828 NHLQEIKLSLEK 1863
>ref|XM_012620.2| Homo sapiens myosin, heavy polypeptide 13, skeletal muscle (MYH13),
mRNA
Length = 5992
Score = 44.7 bits (104), Expect = 0.007
Identities = 42/174 (24%), Positives = 86/174 (49%), Gaps = 11/174 (6%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L+++ A+ +QQ + + ++ QEK++ A +E + ++E ++K++
Sbjct: 3142 EDKVNGLIKINAKLEQQTDDLEGSLE-----------QEKKLRADLERAKRKLEGDLKMS 3288
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+ ++ LKK ++S+ + + D H L+ K I + Q +LEE++
Sbjct: 3289 QESIMDLENDKQQIEEKLKKKEFELSQLQAKIDDEQVHSLQFQKKIKELQARIEELEEEI 3468
Query: 155 -------LDIRKKRLQLKQASE--SKLLEIQTEKNKQKIDLDSMENSERIKIIR 199
I K+R L + E S+ LE + +I+++ +E K+ R
Sbjct: 3469 EAEHTLRAKIEKQRSDLARELEEISERLEEASGATSAQIEMNKKREAEFQKMRR 3630
>dbj|AB032197.1|AB032197 Gallus gallus mRNA for myosin heavy chain, complete cds
Length = 5995
Score = 44.7 bits (104), Expect = 0.007
Identities = 39/174 (22%), Positives = 93/174 (53%), Gaps = 11/174 (6%)
Frame = +2
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+
Sbjct: 3095 EDKVNTLSKAKVKLEQQVDDLEGSLE-----------QEKKVRMDLERAKRKLEGDLKLT 3241
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E + L D++++ LKK ++S+ +S + D +++L K I + Q +LEE+L
Sbjct: 3242 QESVMDLENDKLQMEEKLKKKEFEMSQLNSKIEDEQAIVMQLQKKIKELQARIEELEEEL 3421
Query: 155 LDIRKKRLQL-KQASE-SKLLEIQTEKNKQ-------KIDLDSMENSERIKIIR 199
R R ++ KQ S+ ++ LE+ +E+ ++ +++++ +E +K+ R
Sbjct: 3422 EAERAARAKVEKQRSDLARELEVLSERLEEAGGATAAQLEMNKKREAEFLKLAR 3583
Score = 42.0 bits (97), Expect = 0.044
Identities = 40/180 (22%), Positives = 86/180 (47%), Gaps = 17/180 (9%)
Frame = +2
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEV-----KVAFEIK 99
R R + +LLE V+ + I Q+K++E I ++NE+EE + K
Sbjct: 5144 RARKLAEHELLEATERVNLLHTQNTSLINQKKKLEGDISQMQNEVEESIQECRNAEEKAK 5323
Query: 100 KLALDRMRLSTALKK------NLEKISR-QSSVLMDNMKHLLELNKLIMK-SQQESWDLE 151
K D ++ LKK +LE++ + + D K L E ++ +K +++ LE
Sbjct: 5324 KAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQKRLDEAEQIALKGGKKQIQKLE 5503
Query: 152 EKLLDIRKK-RLQLKQASESKLLEIQTEKNKQKIDLDSME---NSERIKIIRQNLQMEIK 207
++ ++ + +L++ S+++ + E+ +++ S E N R++ + LQ+++K
Sbjct: 5504 SRVRELENELENELRRNSDAQKGARKFERRIKEVTYQSEEDKKNLARMQDLIDKLQLKVK 5683
>dbj|D45163.1|HROMHCEMB Halocynthia roretzi mRNA for embryonic muscle myosin heavy chain,
complete cds
Length = 6045
Score = 44.7 bits (104), Expect = 0.007
Identities = 46/190 (24%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Frame = +2
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED+ L + +A+ +QQ+ + ++ ++ QEK++ +E + ++E ++++
Sbjct: 3110 EDKANSLTKQKAKLEQQVDDLEASLE-----------QEKKLRMDLERTKRKLEGDLRLT 3256
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E + L D+ RL LKK + S+ ++ L D +++L K I + Q +LEE+L
Sbjct: 3257 QETVMDLENDKQRLEEKLKKQEFEYSQLATKLEDEQALVMQLQKKIKELQARIEELEEEL 3436
Query: 155 -------LDIRKKRLQLKQASE--SKLLEIQTEKNKQKIDLDSMENSERIKIIRQ----N 201
+ K+R L + E S+ LE +I+L+ +E K+ R+ N
Sbjct: 3437 EAERAARAKVEKQRADLSRELEELSERLEEAGGATAAQIELNKRREAEFSKLRRELEESN 3616
Query: 202 LQMEIKITTV 211
L E ++T+
Sbjct: 3617 LAHEATVSTL 3646
Score = 37.7 bits (86), Expect = 0.83
Identities = 37/181 (20%), Positives = 80/181 (43%), Gaps = 5/181 (2%)
Frame = +2
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEV-----KVAFEIK 99
R R + +LLE + + I Q++++E +++++++E+EE + K
Sbjct: 5159 RGRKLAETELLESSERSNLLHTQNTALINQKRKLEGELQNVQSEVEEAVQEQRNAEEKAK 5338
Query: 100 KLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
K D ++ LKK D HL + K ++Q DL+++L + +
Sbjct: 5339 KAITDAAMMAEELKKE-----------QDLSSHLERMKK---NTEQTVKDLQQRLDEAEQ 5476
Query: 160 KRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNL 219
L+ + K LE + + + ++D + N E +K R+ + ++T + +NL
Sbjct: 5477 VALKGGKKQVQK-LETRVRELENELDSEQRRNGESVKNQRKTERKLKEVTYQAEEDKKNL 5653
Query: 220 I 220
+
Sbjct: 5654 V 5656
>ref|NM_124607.1| Arabidopsis thaliana chromosome 5 CHR5v12152001 genomic sequence
Length = 2562
Score = 44.3 bits (103), Expect = 0.009
Identities = 42/165 (25%), Positives = 78/165 (46%), Gaps = 7/165 (4%)
Frame = +1
Query: 50 TKQQLLEYKSM------VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLAL 103
TK+ L E ++ ++ +EKT +I QEK+ +E+ + E + L L
Sbjct: 1813 TKKTLAEANNLRLQNKTLEEMQEKTHTEITQEKEQRKHVEEKNKALSMKVQMLESEVLKL 1992
Query: 104 DRMR-LSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRL 162
++R S+A EKI ++ D + L L K + K+ Q+ L + D ++ RL
Sbjct: 1993 TKLRDESSAAATETEKIIQEWRKERDEFERKLSLAKEVAKTAQKELTLTKSSNDDKETRL 2172
Query: 163 QLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIK 207
+ +E + L +Q + + + MEN E K + NL+++I+
Sbjct: 2173 R-NLKTEVEGLSLQYSELQNSFVQEKMENDELRKQV-SNLKVDIR 2301
Score = 34.7 bits (78), Expect = 7.0
Identities = 31/148 (20%), Positives = 72/148 (47%), Gaps = 10/148 (6%)
Frame = +1
Query: 46 LRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFE-----IKK 100
L + KQQ LEY E ++ ++E+++++L+ E+E+ A++ + +
Sbjct: 1513 LEGKLKQQSLEYS-----------ECLITVNELESQVKELKKELEDQAQAYDEDIDTMMR 1659
Query: 101 LALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQ-QESWDLEEKLL---- 155
++ + + ++NL K +++ + ++ + L M+S+ E +L +K L
Sbjct: 1660 EKTEQEQRAIKAEENLRKTRWNNAITAERLQEKCKRLSLEMESKLSEHENLTKKTLAEAN 1839
Query: 156 DIRKKRLQLKQASESKLLEIQTEKNKQK 183
++R + L++ E EI EK ++K
Sbjct: 1840 NLRLQNKTLEEMQEKTHTEITQEKEQRK 1923
>gb|AY016023.1| Sphoeroides nephelus alpha globin gene cluster, complete sequence
Length = 167215
Score = 44.3 bits (103), Expect = 0.009
Identities = 39/148 (26%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Frame = +2
Query: 54 LLEYKSMVDASEEKTPEQIMQEKQI-EAKIEDLENEIEEVKVAFEIKKLALDRMRLSTAL 112
+LEY M S+ PE++ +I K+EDL+ ++EE + ++ K+ +R R +
Sbjct: 52664 ILEYVIMSTTSQN-FPEELQTTAEIWRMKVEDLQKKLEEKEE--QLSKVVNNRKRRTFIH 52834
Query: 113 KKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKL 172
+ LE++S + L +N L + +++ QE EE +K+ L+ K+ S K+
Sbjct: 52835 VETLEELSTTQAALKENELKSAALEESLLRKIQEK---EES----QKRELKEKEESVQKM 52993
Query: 173 LEIQTEKN----KQKIDLDSMENSERIK 196
+E EK +Q++D D + E ++
Sbjct: 52994 MEKHYEKRLGEMQQELDEDLKKKDETME 53077
>dbj|AB019226.1|AB019226 Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K24M7
Length = 73999
Score = 44.3 bits (103), Expect = 0.009
Identities = 42/165 (25%), Positives = 78/165 (46%), Gaps = 7/165 (4%)
Frame = +3
Query: 50 TKQQLLEYKSM------VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLAL 103
TK+ L E ++ ++ +EKT +I QEK+ +E+ + E + L L
Sbjct: 993 TKKTLAEANNLRLQNKTLEEMQEKTHTEITQEKEQRKHVEEKNKALSMKVQMLESEVLKL 1172
Query: 104 DRMR-LSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRL 162
++R S+A EKI ++ D + L L K + K+ Q+ L + D ++ RL
Sbjct: 1173 TKLRDESSAAATETEKIIQEWRKERDEFERKLSLAKEVAKTAQKELTLTKSSNDDKETRL 1352
Query: 163 QLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIK 207
+ +E + L +Q + + + MEN E K + NL+++I+
Sbjct: 1353 R-NLKTEVEGLSLQYSELQNSFVQEKMENDELRKQV-SNLKVDIR 1481
Score = 34.7 bits (78), Expect = 7.0
Identities = 31/148 (20%), Positives = 72/148 (47%), Gaps = 10/148 (6%)
Frame = +3
Query: 46 LRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFE-----IKK 100
L + KQQ LEY E ++ ++E+++++L+ E+E+ A++ + +
Sbjct: 693 LEGKLKQQSLEYS-----------ECLITVNELESQVKELKKELEDQAQAYDEDIDTMMR 839
Query: 101 LALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQ-QESWDLEEKLL---- 155
++ + + ++NL K +++ + ++ + L M+S+ E +L +K L
Sbjct: 840 EKTEQEQRAIKAEENLRKTRWNNAITAERLQEKCKRLSLEMESKLSEHENLTKKTLAEAN 1019
Query: 156 DIRKKRLQLKQASESKLLEIQTEKNKQK 183
++R + L++ E EI EK ++K
Sbjct: 1020NLRLQNKTLEEMQEKTHTEITQEKEQRK 1103
>gb|AE007684.1|AE007684 Clostridium acetobutylicum ATCC824 section 172 of 356 of the complete
genome
Length = 11024
Score = 43.9 bits (102), Expect = 0.012
Identities = 51/216 (23%), Positives = 102/216 (46%), Gaps = 19/216 (8%)
Frame = +2
Query: 49 QTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIK--------- 99
++K + + S ++ +EKT + + ++ +IEDL+N I +K +EI+
Sbjct: 3620 ESKSEHQKILSEIELLKEKTSNSDVAKNKLYKEIEDLDNSIVNLKSRYEIQLKTLTEDKN 3799
Query: 100 --KLALDRMRLSTALKKNLEKISRQSSVLMDNMKH-LLELNKLIMKSQQESWDLEEKLLD 156
K L ++ S KKN++ + + + K+ +++ I ++ E L++++
Sbjct: 3800 YNKELLSKINKSEEKKKNIDGLIEEWEKSIKQYKNDAIDIISTISQNNNEVVILKKEIES 3979
Query: 157 IRKKRLQLKQASE--SKLLEIQTEKNKQKIDLDSMENSERI----KIIRQNLQMEIKITT 210
K +K+A E SK L+I E K + + ++ +++I IR+N K+
Sbjct: 3980 NESKLESIKRAGEGYSKSLKI-NEVTKNTLSEELVKINDKISGYENQIRENRSKISKLNR 4156
Query: 211 VIQHVFQ-NLILGSKVNWAEDPALKEIVLQLEKNVD 245
+I + N L SK N E A K +++ LEK +
Sbjct: 4157 IISDEEKLNRELNSKSNKLE--ANKNMLINLEKQYE 4258
>emb|Y14855.1|HARNATM Helix aspersa mRNA for tropomyosin
Length = 855
Score = 43.9 bits (102), Expect = 0.012
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Frame = +1
Query: 52 QQLLEYKSMVDASEEKTPEQIMQ----EKQIEAKIEDLENEIEEVKVAFEIKKLALDRMR 107
+QLL+ + ++ASE+K E + +++I+ EDLE E ++ A E + A
Sbjct: 184 EQLLDANTKLEASEKKNAEIESETAGLQRRIQLLEEDLERSEERLQSATEKLEEASKAAD 363
Query: 108 LSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLK-- 165
S +K LE S +D ++ L+ K I + + +D + L I + L+
Sbjct: 364 ESERGRKVLESRSLADDERLDGLEAQLKEAKYIAEDAERKFDEAARKLAITEVDLERAEA 543
Query: 166 --QASESKLLEIQTE-----KNKQKIDLDSMENSER 194
+A+E+K+LE++ E N + +++ E S+R
Sbjct: 544 RLEAAEAKILELEEELKVVGNNMKSLEISEQEASQR 651
>ref|XM_047196.3| Homo sapiens myosin, heavy polypeptide 7B, cardiac muscle, beta
(MYH7B), mRNA
Length = 5325
Score = 43.5 bits (101), Expect = 0.015
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Frame = +2
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEV-----KVAFEIK 99
R R +Q+LLE ++ + + Q+K++EA + L E+EE + + K
Sbjct: 4364 RSRRLAEQELLEATERLNLLHSQNTGLLNQKKKLEADLAQLSGEVEEAAQERREAEEKAK 4543
Query: 100 KLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
K D ++ LKK + +S ++ MK LE + + + Q + E+ L K
Sbjct: 4544 KAITDAAMMAEELKK-----EQDTSAHLERMKKTLE--QTVRELQARLEEAEQAALRGGK 4702
Query: 160 KRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQN 201
K++ Q E+K+ E++ E +D + +++E +K +R++
Sbjct: 4703 KQV---QKLEAKVRELEAE-----LDAEQKKHAEALKGVRKH 4804
Score = 38.5 bits (88), Expect = 0.49
Identities = 35/147 (23%), Positives = 76/147 (50%), Gaps = 4/147 (2%)
Frame = +3
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
EDR++ L + + + +QQ+ + + ++ QEK++ E + ++E ++K+
Sbjct: 2316 EDRVSALTKAKLRLEQQVEDLECSLE-----------QEKKLRMDTERAKRKLEGDLKLT 2462
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E + A D+ +L LKK ++S+ S + D ++ K I + Q + +LEE+L
Sbjct: 2463 QESVADAAQDKQQLEEKLKKKDSELSQLSLRVEDEQLLGAQMQKKIKELQARAEELEEEL 2642
Query: 155 LDIR--KKRLQLKQASESKLLEIQTEK 179
R + R++ ++A ++ LE +E+
Sbjct: 2643 EAERAARARVEKQRAEAARELEELSER 2723
>dbj|AB040945.1|AB040945 Homo sapiens mRNA for KIAA1512 protein, partial cds
Length = 5326
Score = 43.5 bits (101), Expect = 0.015
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Frame = +3
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEV-----KVAFEIK 99
R R +Q+LLE ++ + + Q+K++EA + L E+EE + + K
Sbjct: 4365 RSRRLAEQELLEATERLNLLHSQNTGLLNQKKKLEADLAQLSGEVEEAAQERREAEEKAK 4544
Query: 100 KLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
K D ++ LKK + +S ++ MK LE + + + Q + E+ L K
Sbjct: 4545 KAITDAAMMAEELKK-----EQDTSAHLERMKKTLE--QTVRELQARLEEAEQAALRGGK 4703
Query: 160 KRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQN 201
K++ Q E+K+ E++ E +D + +++E +K +R++
Sbjct: 4704 KQV---QKLEAKVRELEAE-----LDAEQKKHAEALKGVRKH 4805
Score = 38.5 bits (88), Expect = 0.49
Identities = 35/147 (23%), Positives = 76/147 (50%), Gaps = 4/147 (2%)
Frame = +3
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
EDR++ L + + + +QQ+ + + ++ QEK++ E + ++E ++K+
Sbjct: 2316 EDRVSALTKAKLRLEQQVEDLECSLE-----------QEKKLRMDTERAKRKLEGDLKLT 2462
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E + A D+ +L LKK ++S+ S + D ++ K I + Q + +LEE+L
Sbjct: 2463 QESVADAAQDKQQLEEKLKKKDSELSQLSLRVEDEQLLGAQMQKKIKELQARAEELEEEL 2642
Query: 155 LDIR--KKRLQLKQASESKLLEIQTEK 179
R + R++ ++A ++ LE +E+
Sbjct: 2643 EAERAARARVEKQRAEAARELEELSER 2723
>gb|BC007808.1|BC007808 Homo sapiens, clone IMAGE:4298477, mRNA, partial cds
Length = 3289
Score = 43.5 bits (101), Expect = 0.015
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Frame = +2
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEV-----KVAFEIK 99
R R +Q+LLE ++ + + Q+K++EA + L E+EE + + K
Sbjct: 2306 RSRRLAEQELLEATERLNLLHSQNTGLLNQKKKLEADLAQLSGEVEEAAQERREAEEKAK 2485
Query: 100 KLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
K D ++ LKK + +S ++ MK LE + + + Q + E+ L K
Sbjct: 2486 KAITDAAMMAEELKK-----EQDTSAHLERMKKTLE--QTVRELQARLEEAEQAALRGGK 2644
Query: 160 KRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQN 201
K++ Q E+K+ E++ E +D + +++E +K +R++
Sbjct: 2645 KQV---QKLEAKVRELEAE-----LDAEQKKHAEALKGVRKH 2746
Score = 38.5 bits (88), Expect = 0.49
Identities = 35/147 (23%), Positives = 76/147 (50%), Gaps = 4/147 (2%)
Frame = +2
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
EDR++ L + + + +QQ+ + + ++ QEK++ E + ++E ++K+
Sbjct: 257 EDRVSALTKAKLRLEQQVEDLECSLE-----------QEKKLRMDTERAKRKLEGDLKLT 403
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E + A D+ +L LKK ++S+ S + D ++ K I + Q + +LEE+L
Sbjct: 404 QESVADAAQDKQQLEEKLKKKDSELSQLSLRVEDEQLLGAQMQKKIKELQARAEELEEEL 583
Query: 155 LDIR--KKRLQLKQASESKLLEIQTEK 179
R + R++ ++A ++ LE +E+
Sbjct: 584 EAERAARARVEKQRAEAARELEELSER 664
>dbj|D00943.1|HUMCAMHC Homo sapiens mRNA for cardiac alpha-myosin heavy chain, complete cds
Length = 5820
Score = 43.5 bits (101), Expect = 0.015
Identities = 42/185 (22%), Positives = 88/185 (46%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+
Sbjct: 3046 EDKVNTLSKSKVKLEQQVDDLEGSLE-----------QEKKVRMDLERAKRKLEGDLKLT 3192
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+++L LKK I++Q+S + D L+L K + ++Q +LEE+L
Sbjct: 3193 QESIMDLENDKLQLEEKLKKKEFDINQQNSKIEDEQVLALQLQKKLKENQARIEELEEEL 3372
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
R R ++ EK + + + E SER++ ++I++ +
Sbjct: 3373 EAERTARAKV-------------EKLRSDLSRELEEISERLEEAGGATSVQIEMNKKREA 3513
Query: 215 VFQNL 219
FQ +
Sbjct: 3514 EFQKM 3528
Score = 35.0 bits (79), Expect = 5.4
Identities = 40/191 (20%), Positives = 89/191 (45%), Gaps = 35/191 (18%)
Frame = +1
Query: 43 LLRLRAQTKQQLLEYKSMVDASEEKTPEQI-------MQEKQIEAKIE-DLENEIEEVKV 94
L ++R Q + + LE +S ++ +E + ++ QI+A+IE L + EE++
Sbjct: 4582 LEKVRKQLEVEKLELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERKLAEKDEEMEQ 4761
Query: 95 AFEIKKLALDRMRLST-----------ALKKNLE--------KISRQSSVLMDNMKHLLE 135
A + +D ++ S +KK +E ++S + + + K +
Sbjct: 4762 AKRNHQRVVDSLQTSLDAETRSRNEVLRVKKKMEGDLNEMEIQLSHANRMAAEAQKQVKS 4941
Query: 136 LNKLIMKSQ-------QESWDLEEKLLDI-RKKRLQLKQASESKLLEIQTEKNKQKIDLD 187
L L+ +Q + + DL+E + + R+ L + E + + QTE++++ D +
Sbjct: 4942 LQSLLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLADRE 5121
Query: 188 SMENSERIKII 198
+E SER++++
Sbjct: 5122 LIETSERVQLL 5154
>gb|U75316.1|SSU75316 Sus scrofa beta-myosin heavy chain mRNA, complete cds
Length = 5996
Score = 43.1 bits (100), Expect = 0.020
Identities = 43/180 (23%), Positives = 86/180 (46%), Gaps = 13/180 (7%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEI---EEVK 93
E++M LL+ + + Q+ + + SEE+ + I + Q+EAK++++ + EE+
Sbjct: 2692 EEKMVSLLQEKNDLQLQVQAEQDNLSDSEERCDQLIKNKIQLEAKVKEMTERLEDEEEMN 2871
Query: 94 VAFEIKKLAL-----DRMRLSTALKKNLEKISRQSSVLMDNMKHLLE----LNKLIMKSQ 144
KK + + R L+ L K+ ++ + +K+L E L+++I K
Sbjct: 2872 AELTAKKRNVEDECSELKRDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLT 3051
Query: 145 QESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENS-ERIKIIRQNLQ 203
+E L+E ++ L QA E K+ + K K + +D + S E+ K +R +L+
Sbjct: 3052 KEKKALQE----AHQQALDDLQAEEDKVNTLTKAKVKLEQHVDDLAGSLEQEKKVRMDLE 3219
>gb|AC009905.11|AC009905 Drosophila melanogaster, chromosome 2L, region 36C-36D, BAC clone
BACR21E16, complete sequence
Length = 170662
Score = 43.1 bits (100), Expect = 0.020
Identities = 42/199 (21%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Frame = +2
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALD 104
++ ++ Q++ + K++V+A + ++ +E L+ E E FE+ ++ D
Sbjct: 132497 KMASEDAQKIADLKTLVEAIQVANANISATNAELSTVLEVLQAEKSETNHIFELFEMEAD 132676
Query: 105 R-----MRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKS----QQESWDLEEKLL 155
+ T +K+ L++ Q + L E K +S QQES +EKL
Sbjct: 132677 MNSERLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQAQQSEQKLQQESQTSKEKLT 132856
Query: 156 DIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHV 215
+I++ +L+ + + K +Q + K + + S+ ++ K+ N+Q+E K + + +
Sbjct: 132857 EIQQSLQELQDSVKQKEELVQNLEEKVR-ESSSIIEAQNTKLNESNVQLENKTSCLKETQ 133033
Query: 216 FQNLILGSKVNWAEDPALK 234
Q L K ++ A K
Sbjct: 133034 DQLLESQKKEKQLQEEAAK 133090
>gb|AC010121.7|AC010121 Drosophila melanogaster, chromosome 2L, region 36C-36D, BAC clone
BACR07M13, complete sequence
Length = 172529
Score = 43.1 bits (100), Expect = 0.020
Identities = 42/199 (21%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Frame = +1
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALD 104
++ ++ Q++ + K++V+A + ++ +E L+ E E FE+ ++ D
Sbjct: 18850 KMASEDAQKIADLKTLVEAIQVANANISATNAELSTVLEVLQAEKSETNHIFELFEMEAD 19029
Query: 105 R-----MRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKS----QQESWDLEEKLL 155
+ T +K+ L++ Q + L E K +S QQES +EKL
Sbjct: 19030 MNSERLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQAQQSEQKLQQESQTSKEKLT 19209
Query: 156 DIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHV 215
+I++ +L+ + + K +Q + K + + S+ ++ K+ N+Q+E K + + +
Sbjct: 19210 EIQQSLQELQDSVKQKEELVQNLEEKVR-ESSSIIEAQNTKLNESNVQLENKTSCLKETQ 19386
Query: 216 FQNLILGSKVNWAEDPALK 234
Q L K ++ A K
Sbjct: 19387 DQLLESQKKEKQLQEEAAK 19443
Score = 34.3 bits (77), Expect = 9.2
Identities = 33/135 (24%), Positives = 65/135 (47%), Gaps = 3/135 (2%)
Frame = -1
Query: 49 QTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRL 108
QT Q++ K+ ++ + E +E + +I DLENE+++++ E + DRM
Sbjct: 75950 QTSQKVTN-KTGIEQEDALLNESAARETSLNLQIFDLENELKQLRHELERVRNERDRM-- 75780
Query: 109 STALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQ---ESWDLEEKLLDIRKKRLQLK 165
L++N + +S D ++ EL L + + E +LEE+ + ++ K
Sbjct: 75779 ---LQENSDFGRDKSDSEADRLRLKSELKDLKFRETRMLSEYSELEEENISLQ------K 75627
Query: 166 QASESKLLEIQTEKN 180
Q S + ++Q+E N
Sbjct: 75626 QVSSLRSSQVQSEYN 75582
>gb|AE003655.2|AE003655 Drosophila melanogaster genomic scaffold 142000013386055 section 48 of
63, complete sequence
Length = 253753
Score = 43.1 bits (100), Expect = 0.020
Identities = 42/199 (21%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Frame = +2
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALD 104
++ ++ Q++ + K++V+A + ++ +E L+ E E FE+ ++ D
Sbjct: 23027 KMASEDAQKIADLKTLVEAIQVANANISATNAELSTVLEVLQAEKSETNHIFELFEMEAD 23206
Query: 105 R-----MRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKS----QQESWDLEEKLL 155
+ T +K+ L++ Q + L E K +S QQES +EKL
Sbjct: 23207 MNSERLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQAQQSEQKLQQESQTSKEKLT 23386
Query: 156 DIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHV 215
+I++ +L+ + + K +Q + K + + S+ ++ K+ N+Q+E K + + +
Sbjct: 23387 EIQQSLQELQDSVKQKEELVQNLEEKVR-ESSSIIEAQNTKLNESNVQLENKTSCLKETQ 23563
Query: 216 FQNLILGSKVNWAEDPALK 234
Q L K ++ A K
Sbjct: 23564 DQLLESQKKEKQLQEEAAK 23620
Score = 34.3 bits (77), Expect = 9.2
Identities = 33/135 (24%), Positives = 65/135 (47%), Gaps = 3/135 (2%)
Frame = -2
Query: 49 QTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRL 108
QT Q++ K+ ++ + E +E + +I DLENE+++++ E + DRM
Sbjct: 80127 QTSQKVTN-KTGIEQEDALLNESAARETSLNLQIFDLENELKQLRHELERVRNERDRM-- 79957
Query: 109 STALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQ---ESWDLEEKLLDIRKKRLQLK 165
L++N + +S D ++ EL L + + E +LEE+ + ++ K
Sbjct: 79956 ---LQENSDFGRDKSDSEADRLRLKSELKDLKFRETRMLSEYSELEEENISLQ------K 79804
Query: 166 QASESKLLEIQTEKN 180
Q S + ++Q+E N
Sbjct: 79803 QVSSLRSSQVQSEYN 79759
>gb|AF065445.1|AF065445 Sinorhizobium meliloti Lon protease (lon) gene, partial cds
Length = 771
Score = 43.1 bits (100), Expect = 0.020
Identities = 47/207 (22%), Positives = 100/207 (47%), Gaps = 5/207 (2%)
Frame = +1
Query: 44 LRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLAL 103
+ + A ++ + E++S V +++ +PE + Q IED + V IK +
Sbjct: 76 VEIEALSRSVVSEFESYVKLNKKISPEVVGVASQ----IEDYSKLADTVASHLSIKIVEK 243
Query: 104 DRMRLSTALKKNLEK----ISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
M +T++K LEK + + SVL + + + + K+Q+E + L E++ I+K
Sbjct: 244 QEMLETTSVKMRLEKALGFMEGEISVLQVEKRIRSRVKRQMEKTQREYY-LNEQMKAIQK 420
Query: 160 KRLQLKQASESKLLEIQTEKNKQKIDLDSMENSE-RIKIIRQNLQMEIKITTVIQHVFQN 218
+ L + ++ E++ +K K+ ++ E ++ +K +RQ M + T V ++ +
Sbjct: 421 E-LGDSEDGRDEMAELEERISKTKLSKEAREKADAELKKLRQMSPMSAEATVVRNYL--D 591
Query: 219 LILGSKVNWAEDPALKEIVLQLEKNVD 245
+LG + W + +K + EK +D
Sbjct: 592 WLLG--LPWGKKSKIKTDLNHAEKVLD 666
>dbj|AB023217.1|AB023217 Homo sapiens mRNA for KIAA1000 protein, partial cds
Length = 3852
Score = 43.1 bits (100), Expect = 0.020
Identities = 41/197 (20%), Positives = 93/197 (46%), Gaps = 26/197 (13%)
Frame = +1
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEV-----KVAFEIK 99
R R ++++LLE ++ + + Q+K++EA + ++ E EEV + K
Sbjct: 1960 RGRRLSEEELLEATERINLFYTQNTSLLSQKKKLEADVARMQKEAEEVVQECQNAEEKAK 2139
Query: 100 KLALDRMRLSTALKKNLEKIS-------RQSSVLMDNMKHLLELNKL-IMKSQQESWDLE 151
K A++ LS LKK + I+ + D K L E ++ +M S+++ LE
Sbjct: 2140 KAAIEAANLSEELKKKQDTIAHLERTRENMEQTITDLQKRLAEAEQMALMGSRKQIQKLE 2319
Query: 152 EKLLDIR-KKRLQLKQASES-----------KLLEIQTEKNKQKID-LDSMENSERIKII 198
++ ++ + ++++++E+ K L Q E++K+ + + + + ++K+
Sbjct: 2320 SRVRELEGELEGEIRRSAEAQRGARRLERCIKELTYQAEEDKKNLSRMQTQMDKLQLKVQ 2499
Query: 199 RQNLQMEIKITTVIQHV 215
Q+E+ T Q++
Sbjct: 2500 NYKQQVEVAETQANQYL 2550
Score = 34.7 bits (78), Expect = 7.0
Identities = 33/152 (21%), Positives = 74/152 (47%), Gaps = 7/152 (4%)
Frame = +1
Query: 53 QLLEYKSMVDASEEKTPEQIMQ-EKQIEAKIEDLENEIE-EVKVAFEI----KKLALDRM 106
+LLE K+ ++ + E+I ++ + I+ L++ ++ E K E+ KK+ D
Sbjct: 1561 ELLEAKAELERKLSEKDEEIENFRRKQQCTIDSLQSSLDSEAKSRIEVTRLKKKMEEDLN 1740
Query: 107 RLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL-LDIRKKRLQLK 165
+ L ++S + L + +L + S Q + DL+E++ + R+ L
Sbjct: 1741 EMELQLSCANRQVSEATKSLGQLQIQIKDLQMQLDDSTQLNSDLKEQVAVAERRNSLLQS 1920
Query: 166 QASESKLLEIQTEKNKQKIDLDSMENSERIKI 197
+ + + L+ QTE+ ++ + + +E +ERI +
Sbjct: 1921 ELEDLRSLQEQTERGRRLSEEELLEATERINL 2016
>emb|AL591786.1|SME591786 Sinorhizobium meliloti 1021 complete chromosome; segment 5/12
Length = 299350
Score = 43.1 bits (100), Expect = 0.020
Identities = 47/207 (22%), Positives = 100/207 (47%), Gaps = 5/207 (2%)
Frame = +3
Query: 44 LRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLAL 103
+ + A ++ + E++S V +++ +PE + Q IED + V IK +
Sbjct: 212082 VEIEALSRSVVSEFESYVKLNKKISPEVVGVASQ----IEDYSKLADTVASHLSIKIVEK 212249
Query: 104 DRMRLSTALKKNLEK----ISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
M +T++K LEK + + SVL + + + + K+Q+E + L E++ I+K
Sbjct: 212250 QEMLETTSVKMRLEKALGFMEGEISVLQVEKRIRSRVKRQMEKTQREYY-LNEQMKAIQK 212426
Query: 160 KRLQLKQASESKLLEIQTEKNKQKIDLDSMENSE-RIKIIRQNLQMEIKITTVIQHVFQN 218
+ L + ++ E++ +K K+ ++ E ++ +K +RQ M + T V ++ +
Sbjct: 212427 E-LGDSEDGRDEMAELEERISKTKLSKEAREKADAELKKLRQMSPMSAEATVVRNYL--D 212597
Query: 219 LILGSKVNWAEDPALKEIVLQLEKNVD 245
+LG + W + +K + EK +D
Sbjct: 212598 WLLG--LPWGKKSKIKTDLNHAEKVLD 212672
>ref|XM_033377.4| Homo sapiens myosin, heavy polypeptide 6, cardiac muscle, alpha
(cardiomyopathy, hypertrophic 1) (MYH6), mRNA
Length = 5865
Score = 43.1 bits (100), Expect = 0.020
Identities = 42/185 (22%), Positives = 88/185 (46%), Gaps = 2/185 (1%)
Frame = +3
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+
Sbjct: 3042 EDKVNSLSKSKVKLEQQVDDLEGSLE-----------QEKKVRMDLERAKRKLEGDLKLT 3188
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+++L LKK I++Q+S + D L+L K + ++Q +LEE+L
Sbjct: 3189 QESIMDLENDKLQLEEKLKKKEFDINQQNSKIEDEQVLALQLQKKLKENQARIEELEEEL 3368
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
R R ++ EK + + + E SER++ ++I++ +
Sbjct: 3369 EAERTARAKV-------------EKLRSDLSRELEEISERLEEAGGATSVQIEMNKKREA 3509
Query: 215 VFQNL 219
FQ +
Sbjct: 3510 EFQKM 3524
Score = 34.3 bits (77), Expect = 9.2
Identities = 45/216 (20%), Positives = 97/216 (44%), Gaps = 43/216 (19%)
Frame = +3
Query: 43 LLRLRAQTKQQLLEYKSMVDASEEKTPEQI-------MQEKQIEAKIE-DLENEIEEVKV 94
L ++R Q + + LE +S ++ +E + ++ QI+A+IE L + EE++
Sbjct: 4578 LEKVRKQLEVEKLELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERKLAEKDEEMEQ 4757
Query: 95 AFEIKKLALDRMRLST-----------ALKKNLE--------KISRQSSVLMDNMKHLLE 135
A + +D ++ S +KK +E ++S + + + K +
Sbjct: 4758 AKRNHQRVVDSLQTSLDAETRSRNEVLRVKKKMEGDLNEMEIQLSHANRMAAEAQKQVKS 4937
Query: 136 LNKLIMKSQ-------QESWDLEEKLLDI-RKKRLQLKQASESKLLEIQTEKNKQKIDLD 187
L L+ +Q + + DL+E + + R+ L + E + + QTE++++ + +
Sbjct: 4938 LQSLLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQE 5117
Query: 188 SMENSERIK--------IIRQNLQMEIKITTVIQHV 215
+E SER++ +I Q +ME +T + V
Sbjct: 5118 LIETSERVQLLHSQNTSLINQKKKMESDLTQLQSEV 5225
>ref|XM_036988.3| Homo sapiens KIAA1000 protein (KIAA1000), mRNA
Length = 3809
Score = 43.1 bits (100), Expect = 0.020
Identities = 41/197 (20%), Positives = 93/197 (46%), Gaps = 26/197 (13%)
Frame = +3
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEV-----KVAFEIK 99
R R ++++LLE ++ + + Q+K++EA + ++ E EEV + K
Sbjct: 1917 RGRRLSEEELLEATERINLFYTQNTSLLSQKKKLEADVARMQKEAEEVVQECQNAEEKAK 2096
Query: 100 KLALDRMRLSTALKKNLEKIS-------RQSSVLMDNMKHLLELNKL-IMKSQQESWDLE 151
K A++ LS LKK + I+ + D K L E ++ +M S+++ LE
Sbjct: 2097 KAAIEAANLSEELKKKQDTIAHLERTRENMEQTITDLQKRLAEAEQMALMGSRKQIQKLE 2276
Query: 152 EKLLDIR-KKRLQLKQASES-----------KLLEIQTEKNKQKID-LDSMENSERIKII 198
++ ++ + ++++++E+ K L Q E++K+ + + + + ++K+
Sbjct: 2277 SRVRELEGELEGEIRRSAEAQRGARRLERCIKELTYQAEEDKKNLSRMQTQMDKLQLKVQ 2456
Query: 199 RQNLQMEIKITTVIQHV 215
Q+E+ T Q++
Sbjct: 2457 NYKQQVEVAETQANQYL 2507
Score = 34.7 bits (78), Expect = 7.0
Identities = 33/152 (21%), Positives = 74/152 (47%), Gaps = 7/152 (4%)
Frame = +3
Query: 53 QLLEYKSMVDASEEKTPEQIMQ-EKQIEAKIEDLENEIE-EVKVAFEI----KKLALDRM 106
+LLE K+ ++ + E+I ++ + I+ L++ ++ E K E+ KK+ D
Sbjct: 1518 ELLEAKAELERKLSEKDEEIENFRRKQQCTIDSLQSSLDSEAKSRIEVTRLKKKMEEDLN 1697
Query: 107 RLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL-LDIRKKRLQLK 165
+ L ++S + L + +L + S Q + DL+E++ + R+ L
Sbjct: 1698 EMELQLSCANRQVSEATKSLGQLQIQIKDLQMQLDDSTQLNSDLKEQVAVAERRNSLLQS 1877
Query: 166 QASESKLLEIQTEKNKQKIDLDSMENSERIKI 197
+ + + L+ QTE+ ++ + + +E +ERI +
Sbjct: 1878 ELEDLRSLQEQTERGRRLSEEELLEATERINL 1973
>gb|AF097904.1|AF097904 Rana catesbeiana myosin heavy chain (MHC-1) mRNA, partial cds
Length = 2772
Score = 43.1 bits (100), Expect = 0.020
Identities = 40/180 (22%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Frame = +2
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEV-----KVAFEIK 99
R R +Q+LL+ V + I +K++E+ + L+NE+EE + K
Sbjct: 1910 RSRKVAEQELLDASERVQLLHSQNTSLINSKKKLESDMSQLQNEVEEAVQEARNAEEKAK 2089
Query: 100 KLALDRMRLSTALKK------NLEKISRQSSVLMDNMKHLL-ELNKLIMK-SQQESWDLE 151
K D ++ LKK +LE++ + + +++H L E +L MK +++ LE
Sbjct: 2090 KAITDASMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQLAMKGGKKQLQKLE 2269
Query: 152 EKLLDIRKK-RLQLKQASESKLLEIQTEKNKQKIDLDSMENSE---RIKIIRQNLQMEIK 207
++ D+ + + K+ +E+ + E+ +++ S E+ + R++ + LQ+++K
Sbjct: 2270 SRVRDVENELDAEQKRGTEAIKGVRKYERRVKELTYQSEEDKKNVLRLQDLVDKLQLKVK 2449
Score = 42.0 bits (97), Expect = 0.044
Identities = 42/176 (23%), Positives = 77/176 (42%), Gaps = 21/176 (11%)
Frame = +2
Query: 49 QTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIED--------------LENEIEEVKV 94
Q ++ +++ ++ +EEK ++ + Q++ KIED L+ IEEV+
Sbjct: 2 QAEETIMDLENEKQQAEEKIKKKDFEISQLQGKIEDEQSLASQLQKKIKELQARIEEVEE 181
Query: 95 AFEIKKLALDRMRLSTA-LKKNLEKISRQSSVLMDNMKHLLELN-KLIMKSQQESWDLEE 152
E ++ A R+ A L + LE+IS + +ELN K + Q+ DLEE
Sbjct: 182 EIEAERAARARVEKQRADLSRELEEISERLEEAGGATSAQIELNKKREAEFQKLRRDLEE 361
Query: 153 KLLDIRKKRLQLKQASESKLLEI-----QTEKNKQKIDLDSMENSERIKIIRQNLQ 203
L L++ + E+ ++ KQK++ + E I + NL+
Sbjct: 362 STLHHEATSAALRKKHADSVAELGEQIDNLQRVKQKLEKEKSELKMEIDDLASNLE 529
Score = 38.9 bits (89), Expect = 0.37
Identities = 36/153 (23%), Positives = 72/153 (46%), Gaps = 7/153 (4%)
Frame = +2
Query: 53 QLLEYKSMVDASEEKTPEQIMQEKQIEAKIED-----LENEIEEVKVAFEIKK-LALDRM 106
+L + KS VD + E+I Q K+ +I D L++EI A +KK + D
Sbjct: 1511 ELNQLKSEVDRKIAEKDEEIEQLKRNSQRIIDTMQSTLDSEIRSRNDALRLKKKMEGDLN 1690
Query: 107 RLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDI-RKKRLQLK 165
L L + + L + HL + + + + DL+E++ + R+ LQ
Sbjct: 1691 ELEIQLSHANRQAAEAQKQLRNVQAHLKDNQLQLDDALRSQEDLKEQVAVVERRNNLQQA 1870
Query: 166 QASESKLLEIQTEKNKQKIDLDSMENSERIKII 198
+ E + QTE++++ + + ++ SER++++
Sbjct: 1871 EIEEIRSALEQTERSRKVAEQELLDASERVQLL 1969
>gb|AE006585.1|AE006585 Streptococcus pyogenes M1 GAS strain SF370, section 114 of 167 of the
complete genome
Length = 10029
Score = 42.7 bits (99), Expect = 0.026
Identities = 30/101 (29%), Positives = 53/101 (51%), Gaps = 5/101 (4%)
Frame = -2
Query: 105 RMRLSTALK-----KNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
R +S+A+K K+ EK S VL + K +E K + +E L+EKLL +K
Sbjct: 7430 RADISSAIKEK*MAKDKEKQSDDKLVLTEWQKRNIEFLKKKKQQAEEEKKLKEKLLSDKK 7251
Query: 160 KRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQ 200
+ Q + ASE+ L+ + + Q+I+ ++ ++ K +RQ
Sbjct: 7250 AQQQAQNASEAVELKTDEKTDSQEIESETTSKPKKTKKVRQ 7128
>ref|NM_003802.1| Homo sapiens myosin, heavy polypeptide 13, skeletal muscle (MYH13),
mRNA
Length = 5992
Score = 42.7 bits (99), Expect = 0.026
Identities = 41/174 (23%), Positives = 86/174 (48%), Gaps = 11/174 (6%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L+++ A+ +QQ + + ++ QEK++ A +E + ++E ++K++
Sbjct: 3142 EDKVNGLIKINAKLEQQTDDLEGSLE-----------QEKKLRADLERAKRKLEGDLKMS 3288
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L ++ ++ LKK ++S+ + + D H L+ K I + Q +LEE++
Sbjct: 3289 QESIMDLENEKQQIEEKLKKKEFELSQLQARIDDEQVHSLQFQKKIKELQARIEELEEEI 3468
Query: 155 -------LDIRKKRLQLKQASE--SKLLEIQTEKNKQKIDLDSMENSERIKIIR 199
I K+R L + E S+ LE + +I+++ +E K+ R
Sbjct: 3469 EAEHTLRAKIEKQRSDLARELEEISERLEEASGATSAQIEMNKKREAEFQKMRR 3630
>gb|AF111782.2|AF111782 Homo sapiens extraocular muscle myosin heavy chain mRNA, complete cds
Length = 5992
Score = 42.7 bits (99), Expect = 0.026
Identities = 41/174 (23%), Positives = 86/174 (48%), Gaps = 11/174 (6%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L+++ A+ +QQ + + ++ QEK++ A +E + ++E ++K++
Sbjct: 3142 EDKVNGLIKINAKLEQQTDDLEGSLE-----------QEKKLRADLERAKRKLEGDLKMS 3288
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L ++ ++ LKK ++S+ + + D H L+ K I + Q +LEE++
Sbjct: 3289 QESIMDLENEKQQIEEKLKKKEFELSQLQARIDDEQVHSLQFQKKIKELQARIEELEEEI 3468
Query: 155 -------LDIRKKRLQLKQASE--SKLLEIQTEKNKQKIDLDSMENSERIKIIR 199
I K+R L + E S+ LE + +I+++ +E K+ R
Sbjct: 3469 EAEHTLRAKIEKQRSDLARELEEISERLEEASGATSAQIEMNKKREAEFQKMRR 3630
>gb|AE001032.1|AE001032 Archaeoglobus fulgidus section 75 of 172 of the complete genome
Length = 14799
Score = 42.7 bits (99), Expect = 0.026
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 23/184 (12%)
Frame = +3
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVK--- 93
E+ + L LR Q L E + + EEK E Q K++ +IEDLE + +EVK
Sbjct: 9588 EEHKSRLESLRKQESSVLQEVRGL----EEKLRELEKQLKEVVERIEDLEKKAKEVKELK 9755
Query: 94 ------------------VAFEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLE 135
+++K D R + ++ L+K +S L + K + E
Sbjct: 9756 PKAERYSILEKLLSEINQALRDVEKREGDLTREAAGIQAQLKKAEEDNSKLEEITKRIEE 9935
Query: 136 LNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLE--IQTEKNKQKIDLDSMENSE 193
L + + E ++ +LL+ K ++ Q ++KL E + +K ++ DL S E
Sbjct: 9936 LER-----ELERFEKSHRLLETLKPKMDRMQGIKAKLEEKNLTPDKVEKMYDLLSKAKEE 10100
Query: 194 RIKI 197
+I
Sbjct: 10101EKEI 10112
>ref|NM_022246.1| Rattus norvegicus RAD50 homolog (S. cerevisiae) (Rad50), mRNA
Length = 4444
Score = 42.7 bits (99), Expect = 0.026
Identities = 40/146 (27%), Positives = 75/146 (50%), Gaps = 8/146 (5%)
Frame = +3
Query: 68 TPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSSVLM 127
T IM+ Q+E K D+E +I + A +++ + LDR T + N EK +Q +
Sbjct: 2523 TDVTIMERFQMELK--DVERKIAQQ--AAKLQGVDLDR----TVQQVNQEKQEKQHK--L 2672
Query: 128 DNMKHLLELNKLIMKSQQES-WDLEEKLLDIRKKRLQL------KQASESKLLEIQTEKN 180
D + +ELN+ +++ QQE L+ K +++ ++LQ+ +Q E + +E+ TE
Sbjct: 2673 DTVSSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIATNLQRRQQMEEQTVELSTEVQ 2852
Query: 181 KQKIDL-DSMENSERIKIIRQNLQME 205
++ D+ E ++I + LQ E
Sbjct: 2853 SLNREIKDAKEQINPLEIALEKLQQE 2930
>gb|AF218576.1|AF218576 Rattus norvegicus Rad50 mRNA, complete cds
Length = 4444
Score = 42.7 bits (99), Expect = 0.026
Identities = 40/146 (27%), Positives = 75/146 (50%), Gaps = 8/146 (5%)
Frame = +3
Query: 68 TPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSSVLM 127
T IM+ Q+E K D+E +I + A +++ + LDR T + N EK +Q +
Sbjct: 2523 TDVTIMERFQMELK--DVERKIAQQ--AAKLQGVDLDR----TVQQVNQEKQEKQHK--L 2672
Query: 128 DNMKHLLELNKLIMKSQQES-WDLEEKLLDIRKKRLQL------KQASESKLLEIQTEKN 180
D + +ELN+ +++ QQE L+ K +++ ++LQ+ +Q E + +E+ TE
Sbjct: 2673 DTVSSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIATNLQRRQQMEEQTVELSTEVQ 2852
Query: 181 KQKIDL-DSMENSERIKIIRQNLQME 205
++ D+ E ++I + LQ E
Sbjct: 2853 SLNREIKDAKEQINPLEIALEKLQQE 2930
>gb|K02443.1|RABMYSAC Rabbit cardiac alpha-myosin heavy chain mRNA; including 3' end of
subfragments 1 and 2 (S1),(S2), and light meromyosin
(LM) 5' end
Length = 1394
Score = 42.7 bits (99), Expect = 0.026
Identities = 42/185 (22%), Positives = 87/185 (46%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+
Sbjct: 631 EDKVNTLTKAKLKLEQQVDDLEGSLE-----------QEKKVRMDLERAKRKLEGDLKLT 777
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+ +L LKK IS+ +S + D +L+L K + ++Q +LEE+L
Sbjct: 778 QESIMDLENDKQQLEERLKKKEFDISQLNSKIEDEQALVLQLQKKLKENQARIEELEEEL 957
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
R R ++ EK + + + E SER++ ++I++ +
Sbjct: 958 EAERTARAKV-------------EKLRSDLSRELEEISERLEEAGGATSVQIEMNKKREA 1098
Query: 215 VFQNL 219
FQ +
Sbjct: 1099EFQKM 1113
>gb|AE004993.1|AE004993 Halobacterium sp. NRC-1 section 24 of 170 of the complete genome
Length = 10286
Score = 42.7 bits (99), Expect = 0.026
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Frame = -2
Query: 62 DASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISR 121
+ +E + PE +++ IEA + DLE ++E+ E+ L L++ A++ ++
Sbjct: 7471 ELAESRIPELTAEKEDIEATVVDLEGRVDELD--GELNSLTLEKEYAEDAVEDLQADVAD 7298
Query: 122 QSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESK---LLEIQTE 178
S D + LN I Q E + E + D+ + LK+ E + L E +
Sbjct: 7297 AESRKADEQARIEALNGDIEAKQAELAEKEAAVEDLEAELADLKRDREERKADLSEAEDA 7118
Query: 179 KNKQKIDL-DSMENSERIKIIRQNLQMEI 206
+++Q + D+ ER++ Q L E+
Sbjct: 7117 RDEQAAAVEDARHRLERLQAAAQTLSEEV 7031
Score = 38.9 bits (89), Expect = 0.37
Identities = 36/170 (21%), Positives = 80/170 (46%), Gaps = 1/170 (0%)
Frame = -2
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAF 96
EDR+ R + ++ + +DA E E +Q+ + A+I++ +E+ +++
Sbjct: 8881 EDRVQDADAERREAVVEIDRKRERIDALETDIREVKVQKASVTAEIQERRDELADIEAEI 8702
Query: 97 EIKKLALDRMRLSTALKKN-LEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLL 155
E D ++ + A +K LE R+ + H E ++L+ ++++ S +L +
Sbjct: 8701 ESVDTEFDELKAALADEKTALEDAKRERN------DHQREQDRLLDEAKRRSEELADAEA 8540
Query: 156 DIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQME 205
D+ R +L + ++ L E+ E K + N E+I + ++L+ E
Sbjct: 8539 DLEDARAELPEV-DATLDELADELEK------ATRNREQIVDVVEDLKQE 8411
>emb|AJ131693.1|HSA131693 Homo sapiens mRNA for AKAP450 protein
Length = 12465
Score = 42.4 bits (98), Expect = 0.034
Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 18/183 (9%)
Frame = +1
Query: 62 DASEEKTPEQIMQEKQIEAKIEDLENEIEEVK---VAFEIKK----LALDRMRLSTAL-K 113
DA + K E E+Q+E E+LEN+ EEV+ + EI+K L + L K
Sbjct: 6811 DAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFK 6990
Query: 114 KNLEKIS---RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASES 170
++EK+ ++S + +H+L K Q++ ++++ + K + QLK +++
Sbjct: 6991 DDMEKLGLAIKESDAMSTQDQHVL-FGKFAQIIQEKEVEIDQLNEQVTKLQQQLKITTDN 7167
Query: 171 KLLEIQTEKNKQKIDLDS-----MENSERIKIIRQNLQMEI-KITTVIQHVFQNLI-LGS 223
K++E EKN+ DL++ M + E +K +N + EI ++ VI+ + Q L +G
Sbjct: 7168 KVIE---EKNELIRDLETQIECLMSDQECVK---RNREEEIEQLNEVIEKLQQELANIGQ 7329
Query: 224 KVN 226
K +
Sbjct: 7330 KTS 7338
>dbj|AK057542.1|AK057542 Homo sapiens cDNA FLJ32980 fis, clone TESTI2017832, moderately
similar to Mouse mRNA for meiosis-specific nuclear
structural protein 1 (MNS1)
Length = 1823
Score = 42.4 bits (98), Expect = 0.034
Identities = 51/197 (25%), Positives = 87/197 (43%), Gaps = 1/197 (0%)
Frame = +2
Query: 47 RAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIE-AKIEDLENEIEEVKVAFEIKKLALDR 105
+ + +QLL+ K M+D K E+ EKQ + K+ + IEE + K+ AL R
Sbjct: 569 KQEAYEQLLKEKLMIDEIVRKIYEEDQLEKQQKLEKMNAMRRYIEEFQ-----KEQALWR 733
Query: 106 MRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLK 165
KK E++ ++ + ++E + QQ D K+ + +KRLQL+
Sbjct: 734 -------KKKREEMEEEN-------RKIIEFANM---QQQREEDRMAKVQENEEKRLQLQ 862
Query: 166 QASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKV 225
A KL E+ ++ + + E+ +I + L+ E + Q K
Sbjct: 863 NALTQKLEEMLRQREDLEQVRQELYQEEQAEIYKSKLKEEAEKKLRKQKEM-------KQ 1021
Query: 226 NWAEDPALKEIVLQLEK 242
++ E ALKE+VLQ K
Sbjct: 1022DFEEQMALKELVLQAAK 1072
>dbj|AK055436.1|AK055436 Homo sapiens cDNA FLJ30874 fis, clone FEBRA2004329, moderately
similar to MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ISOFORM
Length = 3242
Score = 42.4 bits (98), Expect = 0.034
Identities = 41/197 (20%), Positives = 92/197 (45%), Gaps = 26/197 (13%)
Frame = +3
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEV-----KVAFEIK 99
R R ++++LLE ++ + + Q+K++EA + ++ E EEV + K
Sbjct: 2268 RGRRLSEEELLEATERINLFYTQNTSLLSQKKKLEADVARMQKEAEEVVQECQNAEEKAK 2447
Query: 100 KLALDRMRLSTALKKNLEKIS-------RQSSVLMDNMKHLLELNKL-IMKSQQESWDLE 151
K A++ LS LKK + I+ + D K L E ++ +M S+++ LE
Sbjct: 2448 KAAIEAANLSEELKKKQDTIAHLERTRENMEQTITDLQKRLAEAEQMALMGSRKQIQKLE 2627
Query: 152 EKLLDIR-KKRLQLKQASES-----------KLLEIQTEKNKQKID-LDSMENSERIKII 198
+ ++ + ++++++E+ K L Q E++K+ + + + + ++K+
Sbjct: 2628 SRARELEGELEGEIRRSAEAQRGARRLERCIKELTYQAEEDKKNLSRMQTQMDKLQLKVQ 2807
Query: 199 RQNLQMEIKITTVIQHV 215
Q+E+ T Q++
Sbjct: 2808 NYKQQVEVAETQANQYL 2858
Score = 34.7 bits (78), Expect = 7.0
Identities = 33/152 (21%), Positives = 74/152 (47%), Gaps = 7/152 (4%)
Frame = +3
Query: 53 QLLEYKSMVDASEEKTPEQIMQ-EKQIEAKIEDLENEIE-EVKVAFEI----KKLALDRM 106
+LLE K+ ++ + E+I ++ + I+ L++ ++ E K E+ KK+ D
Sbjct: 1869 ELLEAKAELERKLSEKDEEIENFRRKQQCTIDSLQSSLDSEAKSRIEVTRLKKKMEEDLN 2048
Query: 107 RLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL-LDIRKKRLQLK 165
+ L ++S + L + +L + S Q + DL+E++ + R+ L
Sbjct: 2049 EMELQLSCANRQVSEATKSLGQLQIQIKDLQMQLDDSTQLNSDLKEQVAVAERRNSLLQS 2228
Query: 166 QASESKLLEIQTEKNKQKIDLDSMENSERIKI 197
+ + + L+ QTE+ ++ + + +E +ERI +
Sbjct: 2229 ELEDLRSLQEQTERGRRLSEEELLEATERINL 2324
>gb|M26510.1|CHKMYHN Chicken nonmuscle myosin heavy chain (MHC) gene, complete cds
Length = 7003
Score = 42.4 bits (98), Expect = 0.034
Identities = 39/165 (23%), Positives = 81/165 (48%), Gaps = 15/165 (9%)
Frame = +1
Query: 59 SMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDR-MRLSTALKKNLE 117
S ++ ++K + + +EK I AK + + E E K L+L R + + K LE
Sbjct: 4360 SNLEKKQKKFDQLLAEEKNISAKYAEERDRAEAEAREKETKALSLARALEEAIEQKAELE 4539
Query: 118 KISRQSSVLMDNM--------KHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASE 169
++++Q M+++ K + EL K +Q+ +++ +L ++ +L+ +
Sbjct: 4540 RVNKQFRTEMEDLMSSKDDVGKSVHELEKAKRALEQQVEEMKTQLEELED---ELQATED 4710
Query: 170 SKL-LEIQTEKNKQKIDLDSMENSE-----RIKIIRQNLQMEIKI 208
+KL LE+ + K + D D + E R ++IRQ +ME+++
Sbjct: 4711 AKLRLEVNQQAMKAQFDRDLLGRDEQNEEKRKQLIRQVREMEVEL 4845
Score = 35.4 bits (80), Expect = 4.1
Identities = 45/196 (22%), Positives = 82/196 (40%), Gaps = 28/196 (14%)
Frame = +1
Query: 45 RLRAQTKQQLLEYKSMVDA------SEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEI 98
+LR + QQ ++ + D +EEK + I Q +++E ++ED E + + VA
Sbjct: 4714 KLRLEVNQQAMKAQFDRDLLGRDEQNEEKRKQLIRQVREMEVELED-ERKQRSIAVAAR- 4887
Query: 99 KKLALD----RMRLSTALKKN---LEKISRQSSVLMDNMKHL--------------LELN 137
KKL LD + TA K ++ + + + + D M+ L E
Sbjct: 4888 KKLELDLKDLESHIDTANKNRDEAIKHVRKLQAQMKDYMRELEDTRTSREEILAQAKENE 5067
Query: 138 KLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSE-RIK 196
K + + E L+E+L + + Q +Q + EI K + ++ E RI
Sbjct: 5068 KKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEIANSSGKGALAMEEKRRLEARIA 5247
Query: 197 IIRQNLQMEIKITTVI 212
+ + L+ E T +I
Sbjct: 5248 QLEEELEEEQGNTEII 5295
Score = 34.7 bits (78), Expect = 7.0
Identities = 35/165 (21%), Positives = 76/165 (45%), Gaps = 1/165 (0%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAF 96
ED+ L + + + ++ E+ + + EEK+ + + EA I DLE + +
Sbjct: 3001 EDQNLKLAKEKKLLEDRMSEFTTNLTEEEEKSKSLAKLKNKHEAMITDLEERLRREE--- 3171
Query: 97 EIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHL-LELNKLIMKSQQESWDLEEKLL 155
+ L+K K+ SS L D + L ++ +L ++ ++ +L+ L
Sbjct: 3172 ----------KQRQELEKTRRKLEGDSSDLHDQIAELQAQIAELKIQLSKKEEELQAALA 3321
Query: 156 DIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQ 200
+ ++ Q K + K+ E++++ + + DL+S E + R K +Q
Sbjct: 3322 RVEEEAAQ-KNMALKKIRELESQITELQEDLES-ERASRNKAEKQ 3450
>dbj|D83077.1|HUMTPRD Homo sapiens mRNA for TPRD, complete cds
Length = 9009
Score = 42.4 bits (98), Expect = 0.034
Identities = 38/134 (28%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Frame = +2
Query: 77 QIEAKIEDLENEIEEVKVAFE-IKKLALDRMR-LSTALKKNLEKISRQSSVLMDNMKHLL 134
+IE + + L+++++EV +E IK L+ R L LK++LE+ ++ S +D L
Sbjct: 5876 RIEKEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEE-NKISKTELDWF--LQ 6046
Query: 135 ELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLD-SMENSE 193
+L + I K QQE +++E+L ++KK ++ ASE + ++ + ++ LD S+E S
Sbjct: 6047 DLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEMYTQKNDGKEKEHELHLDQSLEISN 6226
Query: 194 RIKIIRQNLQMEIK 207
+ + ++ IK
Sbjct: 6227 TLTNEKMKIEEYIK 6268
>dbj|D83327.1|D83327 Homo sapiens DCRR1 mRNA, partial cds
Length = 7349
Score = 42.4 bits (98), Expect = 0.034
Identities = 38/134 (28%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Frame = +1
Query: 77 QIEAKIEDLENEIEEVKVAFE-IKKLALDRMR-LSTALKKNLEKISRQSSVLMDNMKHLL 134
+IE + + L+++++EV +E IK L+ R L LK++LE+ ++ S +D L
Sbjct: 4228 RIEKEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEE-NKISKTELDWF--LQ 4398
Query: 135 ELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLD-SMENSE 193
+L + I K QQE +++E+L ++KK ++ ASE + ++ + ++ LD S+E S
Sbjct: 4399 DLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEMYTQKNDGKEKEHELHLDQSLEISN 4578
Query: 194 RIKIIRQNLQMEIK 207
+ + ++ IK
Sbjct: 4579 TLTNEKMKIEEYIK 4620
>gb|AF204761.1|AF204761 Schizosaccharomyces pombe spindle-related protein gene, complete
cds
Length = 2120
Score = 42.4 bits (98), Expect = 0.034
Identities = 34/159 (21%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Frame = +3
Query: 51 KQQLLEYKSMVDASEEKTPEQI---MQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMR 107
++Q+ + + + E+K Q+ + EKQ+E + + EIEEV+ E ++ + +
Sbjct: 288 REQIELQRKLAEEHEQKNSLQLRLTLVEKQLEEQSTSYQKEIEEVRNEKEATQVKIHEL- 464
Query: 108 LSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQA 167
L ++I+ + + N + L E N +M S Q + L ++ K ++
Sbjct: 465 ----LDAKWKEIAELKTQIEKNDQALSEKNHEVMVSNQALQMKDTNLTNLEKLFADSREQ 632
Query: 168 SESKLLEI-QTEKNKQKIDLDSMENSERIKIIRQNLQME 205
E+K E+ E+ Q++ + + + E IK + ++++E
Sbjct: 633 LETKCKELAAAEQQLQELSVHNQQLEESIKQVSSSIELE 749
>gb|AF083037.1|AF083037 Homo sapiens A-kinase anchoring protein AKAP350 mRNA, partial cds
Length = 11318
Score = 42.4 bits (98), Expect = 0.034
Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 18/183 (9%)
Frame = +1
Query: 62 DASEEKTPEQIMQEKQIEAKIEDLENEIEEVK---VAFEIKK----LALDRMRLSTAL-K 113
DA + K E E+Q+E E+LEN+ EEV+ + EI+K L + L K
Sbjct: 5650 DAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFK 5829
Query: 114 KNLEKIS---RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASES 170
++EK+ ++S + +H+L K Q++ ++++ + K + QLK +++
Sbjct: 5830 DDMEKLGLAIKESDAMSTQDQHVL-FGKFAQIIQEKEVEIDQLNEQVTKLQQQLKITTDN 6006
Query: 171 KLLEIQTEKNKQKIDLDS-----MENSERIKIIRQNLQMEI-KITTVIQHVFQNLI-LGS 223
K++E EKN+ DL++ M + E +K +N + EI ++ VI+ + Q L +G
Sbjct: 6007 KVIE---EKNELIRDLETQIECLMSDQECVK---RNREEEIEQLNEVIEKLQQELANIGQ 6168
Query: 224 KVN 226
K +
Sbjct: 6169 KTS 6177
>dbj|AB019691.1|AB019691 Homo sapiens mRNA for Centrosome- and Golgi-localized PKN-associated
protein (CG-NAP), complete cds
Length = 12278
Score = 42.4 bits (98), Expect = 0.034
Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 18/183 (9%)
Frame = +3
Query: 62 DASEEKTPEQIMQEKQIEAKIEDLENEIEEVK---VAFEIKK----LALDRMRLSTAL-K 113
DA + K E E+Q+E E+LEN+ EEV+ + EI+K L + L K
Sbjct: 6648 DAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFK 6827
Query: 114 KNLEKIS---RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASES 170
++EK+ ++S + +H+L K Q++ ++++ + K + QLK +++
Sbjct: 6828 DDMEKLGLAIKESDAMSTQDQHVL-FGKFAQIIQEKEVEIDQLNEQVTKLQQQLKITTDN 7004
Query: 171 KLLEIQTEKNKQKIDLDS-----MENSERIKIIRQNLQMEI-KITTVIQHVFQNLI-LGS 223
K++E EKN+ DL++ M + E +K +N + EI ++ VI+ + Q L +G
Sbjct: 7005 KVIE---EKNELIRDLETQIECLMSDQECVK---RNREEEIEQLNEVIEKLQQELANIGQ 7166
Query: 224 KVN 226
K +
Sbjct: 7167 KTS 7175
>emb|X06546.1|GGMYHGSM Chicken mRNA for gizzard smooth muscle myosin heavy chain (MHC)
Length = 6556
Score = 42.4 bits (98), Expect = 0.034
Identities = 37/155 (23%), Positives = 75/155 (47%), Gaps = 2/155 (1%)
Frame = +1
Query: 38 DRMTLLLRLRAQTKQQLL-EYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAF 96
+ M + L + Q +++L E ++ ++ EE++ + ++K+++ ++ DLE ++EE + A
Sbjct: 2806 EEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAAR 2985
Query: 97 EIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLD 156
+ KL L+++ +KK +E + LIM+ Q E KLL+
Sbjct: 2986 Q--KLQLEKVTADGKIKK-------------------MEDDILIMEDQNNKLTKERKLLE 3102
Query: 157 IRKKRLQLKQASESKLLEIQTE-KNKQKIDLDSME 190
R L A E + + T+ KNK + + +E
Sbjct: 3103 ERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELE 3207
>gb|AE003487.1|AE003487 Drosophila melanogaster genomic scaffold 142000013386053 section 4 of 30,
complete sequence
Length = 301051
Score = 42.4 bits (98), Expect = 0.034
Identities = 41/162 (25%), Positives = 81/162 (49%)
Frame = +1
Query: 46 LRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDR 105
LR + +++L E K EEK E+ ++EKQ E K+++ E++K +K +R
Sbjct: 114268 LRMEREEKLKEEKIKEKEREEKLKEEKIKEKQREEKLKE-----EKLK-----EKEREER 114417
Query: 106 MRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLK 165
M+ +K EK R+ + + +K KL K ++E +EK +RK+R +
Sbjct: 114418 MKEKEREEKAKEK-QREEKLREEKIKEKEREEKLKEKLREEKIKEKEKEEKLRKEREEKM 114594
Query: 166 QASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIK 207
+ E + EK K+K ++ ++ ER + +++ + ++K
Sbjct: 114595 REKE------REEKIKEKERVEKIKEKEREEKLKKEKEEKLK 114702
>gb|AF057019.1|AF057019 Dictyostelium discoideum interaptin (abpD) gene, complete cds
Length = 8574
Score = 42.4 bits (98), Expect = 0.034
Identities = 37/163 (22%), Positives = 81/163 (48%), Gaps = 13/163 (7%)
Frame = +1
Query: 47 RAQTKQQLLE----YKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLA 102
R Q QL E +++ +E EQ ++++ IE + + EN+I+++++
Sbjct: 5512 RQQQSNQLSEKDQQLNQLIEKNESDQKEQQLKQQSIENDLIEKENQIQQLQLQLN----- 5676
Query: 103 LDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRL 162
++ +L + + + +KI L LL+LN + QQ+ L++K ++ + +L
Sbjct: 5677 -EQRQLQSEVSIDNDKILELEKQLKQCQSDLLKLND---EKQQQDKQLQDKQIEFDQLQL 5844
Query: 163 ---QLKQASESKLLEIQTEKNKQ----KIDLDSM--ENSERIK 196
Q K +S+ +++Q ++ +Q + DL+ + EN E+ K
Sbjct: 5845 TFNQFKNDKDSQFIQLQDDQKQQLQSIQQDLNQLKQENQEKEK 5973
Score = 41.2 bits (95), Expect = 0.075
Identities = 35/167 (20%), Positives = 84/167 (49%), Gaps = 4/167 (2%)
Frame = +1
Query: 38 DRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDL--ENEIEEVKVA 95
D+ + ++L+ KQQL + ++ +++ E+ Q + + K++ + EN+ +E +++
Sbjct: 5866 DKDSQFIQLQDDQKQQLQSIQQDLNQLKQENQEKEKQLSEKDEKLQSIQFENQEKEKQLS 6045
Query: 96 FEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLL 155
+ +KL + L+ +N EK+ + S +LN+L ++Q++ L EK
Sbjct: 6046 EKDEKLQSIQQNLNQLNDENQEKVKQFSEKDEKLQSIQQDLNQLKQENQEKEKQLSEKDE 6225
Query: 156 DIRKKRLQLKQASESKLL--EIQTEKNKQKIDLDSMENSERIKIIRQ 200
++ + L Q ++ ++ E EK +Q + L N ++ + ++Q
Sbjct: 6226 KLQSIQQDLNQLNDDQIKKNEKLKEKEEQLLKLQQDFNDQQSQQLKQ 6366
Score = 36.2 bits (82), Expect = 2.4
Identities = 27/140 (19%), Positives = 73/140 (51%), Gaps = 6/140 (4%)
Frame = +1
Query: 48 AQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLAL-DRM 106
++ ++L + ++ ++ E++ Q + + K++ ++ ++ ++K + K+ L ++
Sbjct: 6043 SEKDEKLQSIQQNLNQLNDENQEKVKQFSEKDEKLQSIQQDLNQLKQENQEKEKQLSEKD 6222
Query: 107 RLSTALKKNLEKIS----RQSSVLMDNMKHLLELNKLIMKSQ-QESWDLEEKLLDIRKKR 161
+++++L +++ +++ L + + LL+L + Q Q+ LEEKL + +
Sbjct: 6223 EKLQSIQQDLNQLNDDQIKKNEKLKEKEEQLLKLQQDFNDQQSQQLKQLEEKLSEKENQL 6402
Query: 162 LQLKQASESKLLEIQTEKNK 181
QLKQ +E L Q + N+
Sbjct: 6403 QQLKQENEINQLNQQQQSNE 6462
>emb|Z95620.1|SPBC3D6 S.pombe chromosome II cosmid c3D6
Length = 32329
Score = 42.4 bits (98), Expect = 0.034
Identities = 34/159 (21%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Frame = -2
Query: 51 KQQLLEYKSMVDASEEKTPEQI---MQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMR 107
++Q+ + + + E+K Q+ + EKQ+E + + EIEEV+ E ++ + +
Sbjct: 8718 REQIELQRKLAEEHEQKNSLQLRLTLVEKQLEEQSTSYQKEIEEVRNEKEATQVKIHEL- 8542
Query: 108 LSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQA 167
L ++I+ + + N + L E N +M S Q + L ++ K ++
Sbjct: 8541 ----LDAKWKEIAELKTQIEKNDQALSEKNHEVMVSNQALQMKDTNLTNLEKLFADSREQ 8374
Query: 168 SESKLLEI-QTEKNKQKIDLDSMENSERIKIIRQNLQME 205
E+K E+ E+ Q++ + + + E IK + ++++E
Sbjct: 8373 LETKCKELAAAEQQLQELSVHNQQLEESIKQVSSSIELE 8257
>ref|XM_029162.2| Homo sapiens A kinase (PRKA) anchor protein (yotiao) 9 (AKAP9), mRNA
Length = 12458
Score = 42.4 bits (98), Expect = 0.034
Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 18/183 (9%)
Frame = +1
Query: 62 DASEEKTPEQIMQEKQIEAKIEDLENEIEEVK---VAFEIKK----LALDRMRLSTAL-K 113
DA + K E E+Q+E E+LEN+ EEV+ + EI+K L + L K
Sbjct: 6808 DAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFK 6987
Query: 114 KNLEKIS---RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASES 170
++EK+ ++S + +H+L K Q++ ++++ + K + QLK +++
Sbjct: 6988 DDMEKLGLAIKESDAMSTQDQHVL-FGKFAQIIQEKEVEIDQLNEQVTKLQQQLKITTDN 7164
Query: 171 KLLEIQTEKNKQKIDLDS-----MENSERIKIIRQNLQMEI-KITTVIQHVFQNLI-LGS 223
K++E EKN+ DL++ M + E +K +N + EI ++ VI+ + Q L +G
Sbjct: 7165 KVIE---EKNELIRDLETQIECLMSDQECVK---RNREEEIEQLNEVIEKLQQELANIGQ 7326
Query: 224 KVN 226
K +
Sbjct: 7327 KTS 7335
>ref|NM_003316.1| Homo sapiens tetratricopeptide repeat domain 3 (TTC3), mRNA
Length = 8992
Score = 42.4 bits (98), Expect = 0.034
Identities = 38/134 (28%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Frame = +1
Query: 77 QIEAKIEDLENEIEEVKVAFE-IKKLALDRMR-LSTALKKNLEKISRQSSVLMDNMKHLL 134
+IE + + L+++++EV +E IK L+ R L LK++LE+ ++ S +D L
Sbjct: 5863 RIEKEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEE-NKISKTELDWF--LQ 6033
Query: 135 ELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLD-SMENSE 193
+L + I K QQE +++E+L ++KK ++ ASE + ++ + ++ LD S+E S
Sbjct: 6034 DLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEMYTQKNDGKEKEHELHLDQSLEISN 6213
Query: 194 RIKIIRQNLQMEIK 207
+ + ++ IK
Sbjct: 6214 TLTNEKMKIEEYIK 6255
>dbj|D84295.1|D84295 Human mRNA for possible protein TPRDII, complete cds
Length = 8992
Score = 42.4 bits (98), Expect = 0.034
Identities = 38/134 (28%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Frame = +1
Query: 77 QIEAKIEDLENEIEEVKVAFE-IKKLALDRMR-LSTALKKNLEKISRQSSVLMDNMKHLL 134
+IE + + L+++++EV +E IK L+ R L LK++LE+ ++ S +D L
Sbjct: 5863 RIEKEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEE-NKISKTELDWF--LQ 6033
Query: 135 ELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLD-SMENSE 193
+L + I K QQE +++E+L ++KK ++ ASE + ++ + ++ LD S+E S
Sbjct: 6034 DLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEMYTQKNDGKEKEHELHLDQSLEISN 6213
Query: 194 RIKIIRQNLQMEIK 207
+ + ++ IK
Sbjct: 6214 TLTNEKMKIEEYIK 6255
>dbj|D84294.1|D84294 Human mRNA for TPRDI, complete cds
Length = 9078
Score = 42.4 bits (98), Expect = 0.034
Identities = 38/134 (28%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Frame = +3
Query: 77 QIEAKIEDLENEIEEVKVAFE-IKKLALDRMR-LSTALKKNLEKISRQSSVLMDNMKHLL 134
+IE + + L+++++EV +E IK L+ R L LK++LE+ ++ S +D L
Sbjct: 5949 RIEKEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEE-NKISKTELDWF--LQ 6119
Query: 135 ELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLD-SMENSE 193
+L + I K QQE +++E+L ++KK ++ ASE + ++ + ++ LD S+E S
Sbjct: 6120 DLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEMYTQKNDGKEKEHELHLDQSLEISN 6299
Query: 194 RIKIIRQNLQMEIK 207
+ + ++ IK
Sbjct: 6300 TLTNEKMKIEEYIK 6341
>ref|NM_018365.1| Homo sapiens hypothetical protein FLJ11222 (FLJ11222), mRNA
Length = 1945
Score = 42.4 bits (98), Expect = 0.034
Identities = 51/197 (25%), Positives = 87/197 (43%), Gaps = 1/197 (0%)
Frame = +1
Query: 47 RAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIE-AKIEDLENEIEEVKVAFEIKKLALDR 105
+ + +QLL+ K M+D K E+ EKQ + K+ + IEE + K+ AL R
Sbjct: 769 KQEAYEQLLKEKLMIDEIVRKIYEEDQLEKQQKLEKMNAMRRYIEEFQ-----KEQALWR 933
Query: 106 MRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLK 165
KK E++ ++ + ++E + QQ D K+ + +KRLQL+
Sbjct: 934 -------KKKREEMEEEN-------RKIIEFANM---QQQREEDRMAKVQENEEKRLQLQ 1062
Query: 166 QASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKV 225
A KL E+ ++ + + E+ +I + L+ E + Q K
Sbjct: 1063NALTQKLEEMLRQREDLEQVRQELYQEEQAEIYKSKLKEEAEKKLRKQKEM-------KQ 1221
Query: 226 NWAEDPALKEIVLQLEK 242
++ E ALKE+VLQ K
Sbjct: 1222DFEEQMALKELVLQAAK 1272
>gb|AF167159.1|AF167159 Sinorhizobium meliloti Lon protease (lon) and histone-like protein
(hupB) genes, complete cds
Length = 3380
Score = 42.4 bits (98), Expect = 0.034
Identities = 47/207 (22%), Positives = 99/207 (47%), Gaps = 5/207 (2%)
Frame = +2
Query: 44 LRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLAL 103
+ + A ++ + E++S V +++ +PE + Q IED + V IK +
Sbjct: 731 VEIEALSRSVVSEFESYVKLNKKISPEVVGVASQ----IEDYSKLADTVASHLSIKIVEK 898
Query: 104 DRMRLSTALKKNLEK----ISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
M +T++K LEK + + SVL + + + + K+Q+E + L E++ I+K
Sbjct: 899 QEMLETTSVKMRLEKALGFMEGEISVLQVEKRIRSRVKRQMEKTQREYY-LNEQMKAIQK 1075
Query: 160 KRLQLKQASESKLLEIQTEKNKQKIDLDSMENSE-RIKIIRQNLQMEIKITTVIQHVFQN 218
+ L + ++ E++ +K K ++ E ++ +K +RQ M + T V ++ +
Sbjct: 1076E-LGDSEDGRDEMAELEERISKTKFSKEAREKADAELKKLRQMSPMSAEATVVRNYL--D 1246
Query: 219 LILGSKVNWAEDPALKEIVLQLEKNVD 245
+LG + W + +K + EK +D
Sbjct: 1247WLLG--LPWGKKSKIKTDLNHAEKVLD 1321
>dbj|AK002084.1|AK002084 Homo sapiens cDNA FLJ11222 fis, clone PLACE1008177
Length = 1945
Score = 42.4 bits (98), Expect = 0.034
Identities = 51/197 (25%), Positives = 87/197 (43%), Gaps = 1/197 (0%)
Frame = +1
Query: 47 RAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIE-AKIEDLENEIEEVKVAFEIKKLALDR 105
+ + +QLL+ K M+D K E+ EKQ + K+ + IEE + K+ AL R
Sbjct: 769 KQEAYEQLLKEKLMIDEIVRKIYEEDQLEKQQKLEKMNAMRRYIEEFQ-----KEQALWR 933
Query: 106 MRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLK 165
KK E++ ++ + ++E + QQ D K+ + +KRLQL+
Sbjct: 934 -------KKKREEMEEEN-------RKIIEFANM---QQQREEDRMAKVQENEEKRLQLQ 1062
Query: 166 QASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKV 225
A KL E+ ++ + + E+ +I + L+ E + Q K
Sbjct: 1063NALTQKLEEMLRQREDLEQVRQELYQEEQAEIYKSKLKEEAEKKLRKQKEM-------KQ 1221
Query: 226 NWAEDPALKEIVLQLEK 242
++ E ALKE+VLQ K
Sbjct: 1222DFEEQMALKELVLQAAK 1272
>dbj|D84296.1|D84296 Human mRNA for TPRDIII, complete cds
Length = 7416
Score = 42.4 bits (98), Expect = 0.034
Identities = 38/134 (28%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Frame = +3
Query: 77 QIEAKIEDLENEIEEVKVAFE-IKKLALDRMR-LSTALKKNLEKISRQSSVLMDNMKHLL 134
+IE + + L+++++EV +E IK L+ R L LK++LE+ ++ S +D L
Sbjct: 4287 RIEKEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEE-NKISKTELDWF--LQ 4457
Query: 135 ELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLD-SMENSE 193
+L + I K QQE +++E+L ++KK ++ ASE + ++ + ++ LD S+E S
Sbjct: 4458 DLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEMYTQKNDGKEKEHELHLDQSLEISN 4637
Query: 194 RIKIIRQNLQMEIK 207
+ + ++ IK
Sbjct: 4638 TLTNEKMKIEEYIK 4679
>gb|AF091711.1|AF091711 Homo sapiens splice variant AKAP350 mRNA, partial cds
Length = 5660
Score = 42.4 bits (98), Expect = 0.034
Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 18/183 (9%)
Frame = +2
Query: 62 DASEEKTPEQIMQEKQIEAKIEDLENEIEEVK---VAFEIKK----LALDRMRLSTAL-K 113
DA + K E E+Q+E E+LEN+ EEV+ + EI+K L + L K
Sbjct: 131 DAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFK 310
Query: 114 KNLEKIS---RQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASES 170
++EK+ ++S + +H+L K Q++ ++++ + K + QLK +++
Sbjct: 311 DDMEKLGLAIKESDAMSTQDQHVL-FGKFAQIIQEKEVEIDQLNEQVTKLQQQLKITTDN 487
Query: 171 KLLEIQTEKNKQKIDLDS-----MENSERIKIIRQNLQMEI-KITTVIQHVFQNLI-LGS 223
K++E EKN+ DL++ M + E +K +N + EI ++ VI+ + Q L +G
Sbjct: 488 KVIE---EKNELIRDLETQIECLMSDQECVK---RNREEEIEQLNEVIEKLQQELANIGQ 649
Query: 224 KVN 226
K +
Sbjct: 650 KTS 658
>dbj|AB074447.1|AB074447 Macaca fascicularis testis cDNA clone:QtsA-19877, full insert
sequence
Length = 2296
Score = 42.0 bits (97), Expect = 0.044
Identities = 31/142 (21%), Positives = 73/142 (50%), Gaps = 7/142 (4%)
Frame = +3
Query: 49 QTKQQLLEYKSMVDASEEKTPEQIM-QEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMR 107
+ ++++ E + + EEK EQ+ QE++I+ + E++ N+ E K+ + K+ +
Sbjct: 1749 EQEEKIQEQEQKIQEQEEKIREQMWRQEEKIQEQKENMHNQ--EEKIREQENKMHEQEEK 1922
Query: 108 LSTALKK---NLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQL 164
+ +K EKI Q + + + + E ++I + +++ EEK+ + KKR +
Sbjct: 1923 IQEQKEKMHNQEEKIQEQEEKIQEQEEKIHEQEEMIREQEEKMHKQEEKIREQEKKRQEQ 2102
Query: 165 KQ---ASESKLLEIQTEKNKQK 183
++ E K+ E + + ++Q+
Sbjct: 2103 EEKMWRQEEKIREQEEKMHEQE 2168
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence
Length = 163935
Score = 42.0 bits (97), Expect = 0.044
Identities = 37/128 (28%), Positives = 67/128 (51%), Gaps = 7/128 (5%)
Frame = -3
Query: 53 QLLEYKSM--VDASEEKTPEQIMQEKQIEAKIEDLENE-----IEEVKVAFEIKKLALDR 105
QL+E K ++ + K +Q+ ++++IE + +ENE EE K+ E +K +
Sbjct: 129571 QLIEKKRQKEIEKHKRKIEKQMRKKEKIENAKKKIENEKKKIETEEEKLEKEKRKKERKK 129392
Query: 106 MRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLK 165
+L + KN+EK+ ++ V + K++ +L K K+ LEE+ RKKR +
Sbjct: 129391 EKLKKKVAKNIEKL--KNKVAKNVAKNIEKLKKQRAKNIAR---LEEEDKKARKKRKRKV 129227
Query: 166 QASESKLL 173
Q E+K+L
Sbjct: 129226 QVQENKIL 129203
>dbj|D25542.1|HUMGCP372 Human mRNA for golgi antigen gcp372, complete cds
Length = 10295
Score = 42.0 bits (97), Expect = 0.044
Identities = 51/232 (21%), Positives = 115/232 (48%), Gaps = 24/232 (10%)
Frame = +2
Query: 40 MTLLLRLRAQTKQ-----------QLLEYKSMVDASEEKTPEQI----MQEKQIEAKIED 84
++++ LRAQ KQ + L+Y+S A + EQI ++ K + KIE
Sbjct: 2402 LSMVTELRAQVKQLEMNLAEAERQRRLDYESQT-AHDNLLTEQIHSLSIEAKSKDVKIEV 2578
Query: 85 LENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSSVL--MDNMKHLL----ELNK 138
L+NE+++V++ F ++ L +L+ L+ +++S VL + ++H+ EL++
Sbjct: 2579 LQNELDDVQLQFS------EQSTLIRSLQSQLQ--NKESEVLEGAERVRHISSKVEELSQ 2734
Query: 139 LIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKII 198
+ + + E +++ LL+ ++ L+Q E EK++Q ++ + +++
Sbjct: 2735 ALSQKELEITKMDQLLLEKKRDVETLQQTIE--------EKDQQVTEISFSMTEKMVQLN 2890
Query: 199 RQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALK---EIVLQLEKNVDMM 247
+ + ++I T+ + + NL+ S+ A+ ++ E+ L++N D M
Sbjct: 2891 EEKFSLGVEIKTLKEQL--NLL--SRAEEAKKEQVEEDNEVSSGLKQNYDEM 3034
>ref|NM_002078.2| Homo sapiens golgi autoantigen, golgin subfamily a, 4 (GOLGA4), mRNA
Length = 7694
Score = 42.0 bits (97), Expect = 0.044
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 43/206 (20%)
Frame = +1
Query: 46 LRAQTKQQLLEYKSMVDASE---EKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLA 102
L+ +Q+ +E+K +V + E E+ + K+ E KI LEN++ +K E KK
Sbjct: 4927 LKNYNQQKDIEHKELVQKLQHFQELGEEKDNRVKEAEEKILTLENQVYSMKAELETKKKE 5106
Query: 103 LDRMRLST--------ALKKNLE----------------KISRQSSVLMDNMK------- 131
L+ + LS AL+ LE KI+ L+ M+
Sbjct: 5107 LEHVNLSVKSKEEELKALEDRLESESAAKLAELKRKAEQKIAAIKKQLLSQMEEKEEQYK 5286
Query: 132 -----HLLELNKLIMKSQQESWDLEEKLLDIRKKRLQL----KQASESKLLEIQTEKNKQ 182
HL ELN + + ++E LEEKL + + + + A Q E + Q
Sbjct: 5287 KGTESHLSELNTKLQEREREVHILEEKLKSVESSQSETLIVPRSAKNVAAYTEQEEADSQ 5466
Query: 183 KIDLDSMENSERIKIIRQNLQMEIKI 208
+ E E+I ++++NL + K+
Sbjct: 5467 GCVQKTYE--EKISVLQRNLTEKEKL 5538
>gb|U41740.1|HSU41740 Human trans-Golgi p230 mRNA, complete cds
Length = 7695
Score = 42.0 bits (97), Expect = 0.044
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 43/206 (20%)
Frame = +1
Query: 46 LRAQTKQQLLEYKSMVDASE---EKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLA 102
L+ +Q+ +E+K +V + E E+ + K+ E KI LEN++ +K E KK
Sbjct: 4927 LKNYNQQKDIEHKELVQKLQHFQELGEEKDNRVKEAEEKILTLENQVYSMKAELETKKKE 5106
Query: 103 LDRMRLST--------ALKKNLE----------------KISRQSSVLMDNMK------- 131
L+ + LS AL+ LE KI+ L+ M+
Sbjct: 5107 LEHVNLSVKSKEEELKALEDRLESESAAKLAELKRKAEQKIAAIKKQLLSQMEEKEEQYK 5286
Query: 132 -----HLLELNKLIMKSQQESWDLEEKLLDIRKKRLQL----KQASESKLLEIQTEKNKQ 182
HL ELN + + ++E LEEKL + + + + A Q E + Q
Sbjct: 5287 KGTESHLSELNTKLQEREREVHILEEKLKSVESSQSETLIVPRSAKNVAAYTEQEEADSQ 5466
Query: 183 KIDLDSMENSERIKIIRQNLQMEIKI 208
+ E E+I ++++NL + K+
Sbjct: 5467 GCVQKTYE--EKISVLQRNLTEKEKL 5538
>gb|U85022.1|GGU85022 Gallus gallus slow myosin heavy chain 1 (SM1) mRNA, partial cds
Length = 917
Score = 42.0 bits (97), Expect = 0.044
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 7/187 (3%)
Frame = +1
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEV-----KVAFEIK 99
R R +Q+LLE V+ + I Q+K++E I L +E+E+ + K
Sbjct: 100 RSRKLAEQELLEATERVNLLHSQNTGLINQKKKLETDISQLSSEVEDAVQECRNAEEKAK 279
Query: 100 KLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
K D ++ LKK + +S ++ MK +E + I Q + E+ L K
Sbjct: 280 KAITDAAMMAEELKK-----EQDTSAHLERMKKNME--QTIKDLQLRLDEAEQLALKGGK 438
Query: 160 KRLQLKQASESKL-LEIQTEKNKQKIDLDSMENSE-RIKIIRQNLQMEIKITTVIQHVFQ 217
K+LQ +A +L E++ E+ + + + SE R+K + + + K +Q +
Sbjct: 439 KQLQKLEARVRELENELEAEQKRHAESVKGLRKSERRVKELSYQTEEDRKNMVRLQDLVD 618
Query: 218 NLILGSK 224
L L K
Sbjct: 619 KLQLKVK 639
>gb|U31906.1|HSU31906 Homo sapiens golgin-245 mRNA, complete cds
Length = 6965
Score = 42.0 bits (97), Expect = 0.044
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 43/206 (20%)
Frame = +2
Query: 46 LRAQTKQQLLEYKSMVDASE---EKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLA 102
L+ +Q+ +E+K +V + E E+ + K+ E KI LEN++ +K E KK
Sbjct: 4256 LKNYNQQKDIEHKELVQKLQHFQELGEEKDNRVKEAEEKILTLENQVYSMKAELETKKKE 4435
Query: 103 LDRMRLST--------ALKKNLE----------------KISRQSSVLMDNMK------- 131
L+ + LS AL+ LE KI+ L+ M+
Sbjct: 4436 LEHVNLSVKSKEEELKALEDRLESESAAKLAELKRKAEQKIAAIKKQLLSQMEEKEEQYK 4615
Query: 132 -----HLLELNKLIMKSQQESWDLEEKLLDIRKKRLQL----KQASESKLLEIQTEKNKQ 182
HL ELN + + ++E LEEKL + + + + A Q E + Q
Sbjct: 4616 KGTESHLSELNTKLQEREREVHILEEKLKSVESSQSETLIVPRSAKNVAAYTEQEEADSQ 4795
Query: 183 KIDLDSMENSERIKIIRQNLQMEIKI 208
+ E E+I ++++NL + K+
Sbjct: 4796 GCVQKTYE--EKISVLQRNLTEKEKL 4867
>ref|NM_004487.1| Homo sapiens golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 (GOLGB1), mRNA
Length = 10300
Score = 42.0 bits (97), Expect = 0.044
Identities = 51/232 (21%), Positives = 115/232 (48%), Gaps = 24/232 (10%)
Frame = +1
Query: 40 MTLLLRLRAQTKQ-----------QLLEYKSMVDASEEKTPEQI----MQEKQIEAKIED 84
++++ LRAQ KQ + L+Y+S A + EQI ++ K + KIE
Sbjct: 2392 LSMVTELRAQVKQLEMNLAEAERQRRLDYESQT-AHDNLLTEQIHSLSIEAKSKDVKIEV 2568
Query: 85 LENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSSVL--MDNMKHLL----ELNK 138
L+NE+++V++ F ++ L +L+ L+ +++S VL + ++H+ EL++
Sbjct: 2569 LQNELDDVQLQFS------EQSTLIRSLQSQLQ--NKESEVLEGAERVRHISSKVEELSQ 2724
Query: 139 LIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKII 198
+ + + E +++ LL+ ++ L+Q E EK++Q ++ + +++
Sbjct: 2725 ALSQKELEITKMDQLLLEKKRDVETLQQTIE--------EKDQQVTEISFSMTEKMVQLN 2880
Query: 199 RQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALK---EIVLQLEKNVDMM 247
+ + ++I T+ + + NL+ S+ A+ ++ E+ L++N D M
Sbjct: 2881 EEKFSLGVEIKTLKEQL--NLL--SRAEEAKKEQVEEDNEVSSGLKQNYDEM 3024
>emb|X75304.1|HSMAC H.sapiens giantin mRNA
Length = 10300
Score = 42.0 bits (97), Expect = 0.044
Identities = 51/232 (21%), Positives = 115/232 (48%), Gaps = 24/232 (10%)
Frame = +1
Query: 40 MTLLLRLRAQTKQ-----------QLLEYKSMVDASEEKTPEQI----MQEKQIEAKIED 84
++++ LRAQ KQ + L+Y+S A + EQI ++ K + KIE
Sbjct: 2392 LSMVTELRAQVKQLEMNLAEAERQRRLDYESQT-AHDNLLTEQIHSLSIEAKSKDVKIEV 2568
Query: 85 LENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSSVL--MDNMKHLL----ELNK 138
L+NE+++V++ F ++ L +L+ L+ +++S VL + ++H+ EL++
Sbjct: 2569 LQNELDDVQLQFS------EQSTLIRSLQSQLQ--NKESEVLEGAERVRHISSKVEELSQ 2724
Query: 139 LIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKII 198
+ + + E +++ LL+ ++ L+Q E EK++Q ++ + +++
Sbjct: 2725 ALSQKELEITKMDQLLLEKKRDVETLQQTIE--------EKDQQVTEISFSMTEKMVQLN 2880
Query: 199 RQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALK---EIVLQLEKNVDMM 247
+ + ++I T+ + + NL+ S+ A+ ++ E+ L++N D M
Sbjct: 2881 EEKFSLGVEIKTLKEQL--NLL--SRAEEAKKEQVEEDNEVSSGLKQNYDEM 3024
>dbj|AB030645.1|AB030645 Streptococcus pyogenes genes for MurD, MurG, DivIB, partial and
complete cds
Length = 2986
Score = 42.0 bits (97), Expect = 0.044
Identities = 30/101 (29%), Positives = 53/101 (51%), Gaps = 5/101 (4%)
Frame = +1
Query: 105 RMRLSTALK-----KNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
R +S+A+K K+ EK S VL + K +E K + +E L+EKLL +K
Sbjct: 2368 RADISSAIKEK*MAKDKEKQSDDKLVLTEWQKRNIEFLKKKKQQAEEEKKLKEKLLSDKK 2547
Query: 160 KRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQ 200
+ Q + ASE+ L+ + + Q+I+ ++ ++ K +RQ
Sbjct: 2548 AQQQAQNASEAVELKTDEKTDSQEIESETTSKPKKPKKVRQ 2670
>ref|NM_016343.2| Homo sapiens centromere protein F (350/400kD, mitosin) (CENPF), mRNA
Length = 10211
Score = 42.0 bits (97), Expect = 0.044
Identities = 50/201 (24%), Positives = 91/201 (44%), Gaps = 29/201 (14%)
Frame = +1
Query: 36 SEDRMTLLLRLRAQTK---QQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEV 92
SE + + L A+ K Q L + ++ + + K Q + ++ KI EN
Sbjct: 1555 SEQKAREVCHLEAELKNIKQCLNQSQNFAEEMKAKNTSQETMLRDLQEKINQQEN----- 1719
Query: 93 KVAFEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLE-LNKLIMKSQQESWDLE 151
L L++++L+ A +LEK S L+ +H +E LN + K+++ES L
Sbjct: 1720 -------SLTLEKLKLAVA---DLEKQRDCSQDLLKKREHHIEQLNDKLSKTEKESKAL- 1866
Query: 152 EKLLDIRKKRLQLKQ--------ASESKLLEIQTEKNKQKI--------------DLDSM 189
L+++KK +LK+ SE++ L Q E K+ + + S
Sbjct: 1867 LSALELKKKEYELKEEKTLFSCWKSENEKLLTQMESEKENLQSKINHLETCLKTQQIKSH 2046
Query: 190 ENSERIKII---RQNLQMEIK 207
E +ER++ + R+NL +EI+
Sbjct: 2047 EYNERVRTLEMDRENLSVEIR 2109
Score = 35.8 bits (81), Expect = 3.2
Identities = 30/122 (24%), Positives = 60/122 (48%), Gaps = 2/122 (1%)
Frame = +1
Query: 51 KQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLST 110
K ++ + + SEE I+ + +A++E L+ +IEE+ + ++ +L L +R
Sbjct: 6526 KDKVENLERELQMSEENQELVILDAENSKAEVETLKTQIEEMARSLKVFELDLVTLR--- 6696
Query: 111 ALKKNLEKISRQSSVLMDNMKHLLELNKLIM--KSQQESWDLEEKLLDIRKKRLQLKQAS 168
+ K+NL K ++ + + LL K ++ K Q E EE + + QLK+ +
Sbjct: 6697 SEKENLTKQIQEKQGQLSELDKLLSSFKSLLEEKEQAEIQIKEESKTAVEMLQNQLKELN 6876
Query: 169 ES 170
E+
Sbjct: 6877 EA 6882
>gb|U30872.1|HSU30872 Human mitosin mRNA, complete cds
Length = 10211
Score = 42.0 bits (97), Expect = 0.044
Identities = 50/201 (24%), Positives = 91/201 (44%), Gaps = 29/201 (14%)
Frame = +1
Query: 36 SEDRMTLLLRLRAQTK---QQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEV 92
SE + + L A+ K Q L + ++ + + K Q + ++ KI EN
Sbjct: 1555 SEQKAREVCHLEAELKNIKQCLNQSQNFAEEMKAKNTSQETMLRDLQEKINQQEN----- 1719
Query: 93 KVAFEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLE-LNKLIMKSQQESWDLE 151
L L++++L+ A +LEK S L+ +H +E LN + K+++ES L
Sbjct: 1720 -------SLTLEKLKLAVA---DLEKQRDCSQDLLKKREHHIEQLNDKLSKTEKESKAL- 1866
Query: 152 EKLLDIRKKRLQLKQ--------ASESKLLEIQTEKNKQKI--------------DLDSM 189
L+++KK +LK+ SE++ L Q E K+ + + S
Sbjct: 1867 LSALELKKKEYELKEEKTLFSCWKSENEKLLTQMESEKENLQSKINHLETCLKTQQIKSH 2046
Query: 190 ENSERIKII---RQNLQMEIK 207
E +ER++ + R+NL +EI+
Sbjct: 2047 EYNERVRTLEMDRENLSVEIR 2109
Score = 35.8 bits (81), Expect = 3.2
Identities = 30/122 (24%), Positives = 60/122 (48%), Gaps = 2/122 (1%)
Frame = +1
Query: 51 KQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLST 110
K ++ + + SEE I+ + +A++E L+ +IEE+ + ++ +L L +R
Sbjct: 6526 KDKVENLERELQMSEENQELVILDAENSKAEVETLKTQIEEMARSLKVFELDLVTLR--- 6696
Query: 111 ALKKNLEKISRQSSVLMDNMKHLLELNKLIM--KSQQESWDLEEKLLDIRKKRLQLKQAS 168
+ K+NL K ++ + + LL K ++ K Q E EE + + QLK+ +
Sbjct: 6697 SEKENLTKQIQEKQGQLSELDKLLSSFKSLLEEKEQAEIQIKEESKTAVEMLQNQLKELN 6876
Query: 169 ES 170
E+
Sbjct: 6877 EA 6882
>emb|X82834.1|HSGOLGIN H.sapiens mRNA for golgin
Length = 7683
Score = 42.0 bits (97), Expect = 0.044
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 43/206 (20%)
Frame = +1
Query: 46 LRAQTKQQLLEYKSMVDASE---EKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLA 102
L+ +Q+ +E+K +V + E E+ + K+ E KI LEN++ +K E KK
Sbjct: 4849 LKNYNQQKDIEHKELVQKLQHFQELGEEKDNRVKEAEEKILTLENQVYSMKAELETKKKE 5028
Query: 103 LDRMRLST--------ALKKNLE----------------KISRQSSVLMDNMK------- 131
L+ + LS AL+ LE KI+ L+ M+
Sbjct: 5029 LEHVNLSVKSKEEELKALEDRLESESAAKLAELKRKAEQKIAAIKKQLLSQMEEKEEQYK 5208
Query: 132 -----HLLELNKLIMKSQQESWDLEEKLLDIRKKRLQL----KQASESKLLEIQTEKNKQ 182
HL ELN + + ++E LEEKL + + + + A Q E + Q
Sbjct: 5209 KGTESHLSELNTKLQEREREVHILEEKLKSVESSQSETLIVPRSAKNVAAYTEQEEADSQ 5388
Query: 183 KIDLDSMENSERIKIIRQNLQMEIKI 208
+ E E+I ++++NL + K+
Sbjct: 5389 GCVQKTYE--EKISVLQRNLTEKEKL 5460
>gb|AF335500.1|AF335500 Physarum polycephalum major plasmodial myosin heavy chain (mynP1)
mRNA, complete cds
Length = 6484
Score = 41.6 bits (96), Expect = 0.058
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 19/179 (10%)
Frame = +2
Query: 38 DRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEI-EEVKVAF 96
+R+ L +L+ + + ++ E + Q+++I++ +EDLEN+ EEV
Sbjct: 2963 ERIANLEKLKNELQAEVEELSDQFADETKSRASLEKQKRKIDSDLEDLENKYNEEVTQRT 3142
Query: 97 EIKKL-----------------ALDRMRLSTALKKNLE-KISRQSSVLMDNMKHLLELNK 138
E+ KL ++R + L+K LE ++ +++ L + K+ L K
Sbjct: 3143 ELSKLKNQLDSDLRSTTSQLESEIERRGILEGLQKKLEAALASETAKLEEEQKNRNALEK 3322
Query: 139 LIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKI 197
+Q+ DL ++L D +K R EK ++K+DLD E +++ +
Sbjct: 3323 AKKALEQQQRDLTQELQDEKKNR-------------DTAEKARKKLDLDLTELRDQLDV 3460
Score = 41.2 bits (95), Expect = 0.075
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 5/177 (2%)
Frame = +2
Query: 36 SEDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVA 95
+ D+ L RL+ + Q E ++A +EKT + KQ E ++EDL+ ++EE A
Sbjct: 4397 TSDQYIALKRLQEENSNQHRE----LEALDEKTAQWNRLRKQAEVQLEDLKAQLEEAISA 4564
Query: 96 FEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLL 155
KL +++ + L+ +E + + V N+ H EL K QQE +
Sbjct: 4565 ----KLKVEKQKRD--LENKVEDLESAADVNSANV-HPDELR----KKQQE--------V 4687
Query: 156 DIRKKRLQLKQASESKLLEIQTEKNKQ-KIDLDSMENSERIKI----IRQNLQMEIK 207
D KK+L +Q ++K E++ + K +++E ER K+ IR+ L+ E++
Sbjct: 4688 DELKKQLAAEQERKTKDEEVKRQLRKDVTTQEEAIEEYERNKLNAERIRKKLENELE 4858
Score = 37.4 bits (85), Expect = 1.1
Identities = 36/173 (20%), Positives = 76/173 (43%), Gaps = 22/173 (12%)
Frame = +2
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAF----EIKK 100
+ R + L E + +D ++++E ++EDL ++EE+K A +IK+
Sbjct: 3404 KARKKLDLDLTELRDQLDVKGGDVKALADLKQKVEQELEDLRRQVEELKKAVSNLEKIKR 3583
Query: 101 L-------ALDRMRLSTALKKNLEKISRQ--------SSVLMDNMKHLLELNKLIMKSQQ 145
A + + S A NL K+ ++ + L + + L+K K+ Q
Sbjct: 3584 TLEAQLNDANNALAESNAENANLTKLKKKLEEDLVALNQKLAEEQRDKAALDKAKKKADQ 3763
Query: 146 ESWDLEEKLLDIRKKRLQLKQ---ASESKLLEIQTEKNKQKIDLDSMENSERI 195
+ +L+ L ++ R L Q A+E KL + E +++ +E ++++
Sbjct: 3764 DVKELKSNLENVSASRATLDQNLKATEEKLENAKVELEQEQKTKQQLEKAKKL 3922
Score = 37.0 bits (84), Expect = 1.4
Identities = 44/187 (23%), Positives = 85/187 (44%), Gaps = 26/187 (13%)
Frame = +2
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLEN----------------- 87
RLR Q + QL + K+ ++ + + Q++ +E K+EDLE+
Sbjct: 4496 RLRKQAEVQLEDLKAQLEEAISAKLKVEKQKRDLENKVEDLESAADVNSANVHPDELRKK 4675
Query: 88 --EIEEVKVAFEIKKLALDRMRLS--TALKKNLEK-ISRQSSVLMDNMKHLLELNKLIMK 142
E++E+K K+LA ++ R + +K+ L K ++ Q + + ++ L ++ K
Sbjct: 4676 QQEVDELK-----KQLAAEQERKTKDEEVKRQLRKDVTTQEEAIEEYERNKLNAERIRKK 4840
Query: 143 SQQESWDLEEKLLD---IRKK-RLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKII 198
+ E DL+ L +RKK L K + EI+ + K D D + +E + ++
Sbjct: 4841 LENELEDLKASLESEQILRKKAELLAKPRGKEGATEIKPTVS-SKSDEDFKKLTEELAVL 5017
Query: 199 RQNLQME 205
+ L E
Sbjct: 5018 KTELDGE 5038
>dbj|AP003192.2|AP003192 Clostridium perfringens DNA, complete genome, section 8/10
Length = 301550
Score = 41.6 bits (96), Expect = 0.058
Identities = 34/119 (28%), Positives = 60/119 (49%), Gaps = 1/119 (0%)
Frame = -3
Query: 51 KQQLLEYKSMVD-ASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLS 109
K+Q+LE + + A EEK + +E +++ L+ E EEVK EI
Sbjct: 61308 KKQILELEENLQLALEEKDALGKKISEDMEVEMKALKEEAEEVKAEMEI----------- 61162
Query: 110 TALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQAS 168
L++ +K+ R+ +LM+N K EL + ++ + DLE+K LD + K K+++
Sbjct: 61161 --LEEEAKKLKREKELLMENNK---ELRRNWQTAKYKLLDLEQKYLDSQVKLATSKKSN 61000
>gb|U67604.1|U67604 Methanococcus jannaschii section 146 of 150 of the complete genome
Length = 12157
Score = 41.6 bits (96), Expect = 0.058
Identities = 51/213 (23%), Positives = 99/213 (45%), Gaps = 21/213 (9%)
Frame = +1
Query: 55 LEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKK 114
L ++++ EK E++++ L I+E++V E K LD LKK
Sbjct: 9382 LRLNNIINELNEKGNEEVLE----------LHKSIKELEVEIENDKKVLDSS--INELKK 9525
Query: 115 NLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQA---SESK 171
+I + + + K ++E I++ +Q+ ++EEK+ ++ ++ +LK+A SES
Sbjct: 9526 VEVEIENKKKEIKETQKKIIENRDSIIEKEQQIKEIEEKIKNLNYEKERLKEAIAESESI 9705
Query: 172 L-------LEIQTE--KNKQKI--------DLDSMENSERIKIIRQNLQMEIKITTVIQH 214
+ +EI E KN+ ++ DLD++ N + +I + N +M K+ ++
Sbjct: 9706 IKHLKESEMEIADEIAKNQNELYRLKKELNDLDNLINRKNFEIEKNN-EMIKKLKEELET 9882
Query: 215 VFQNLILGSKVNWAEDPALKEIVLQLEK-NVDM 246
V ED K + L+LE NV++
Sbjct: 9883 V-------------EDVDTKPLYLELENLNVEI 9942
>dbj|AB021180.1|AB021180 Gallus gallus mRNA for skeletal myosin heavy chain, complete cds
Length = 5951
Score = 41.6 bits (96), Expect = 0.058
Identities = 42/174 (24%), Positives = 88/174 (50%), Gaps = 11/174 (6%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+A
Sbjct: 3052 EDKVNTLTKAKTKLEQQVDDLEGSLE-----------QEKKLRMDLERAKRKLEGDLKLA 3198
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
+ I L D+ +L LKK +IS+ S + D ++L K I + Q + +LEE++
Sbjct: 3199 HDSIMDLENDKQQLDEKLKKKDFEISQIQSKIEDEQALGMQLQKKIKELQARTEELEEEI 3378
Query: 155 LDIRKKRLQLK--QASESKLLEIQTEKNKQ-------KIDLDSMENSERIKIIR 199
R R + + +A S+ LE +E+ ++ +ID++ +E K+ R
Sbjct: 3379 EAERTSRAKAEKHRADLSRELEEISERLEEAGGATAAQIDMNKKREAEFQKMRR 3540
Score = 35.4 bits (80), Expect = 4.1
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 18/174 (10%)
Frame = +1
Query: 43 LLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQ-----IEAKIEDLENEIEEVKVAFE 97
+LRL+ + Q KS +D + E+I Q K+ +E+ L+ E+ A
Sbjct: 4684 ILRLQLELNQ----VKSEIDRKIAEKDEEIDQLKRNHLRIVESMQRTLDAEVRSRNEALR 4851
Query: 98 IKKLA---LDRM--------RLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQE 146
+KK L+ M R++ +KNL VL D HL + ++SQ+
Sbjct: 4852 LKKKMEGDLNEMEIQLNHANRMAAEAQKNLRNTQ---GVLKDTQIHLDDA----LRSQE- 5007
Query: 147 SWDLEEKLLDIRKKRLQLKQASESKLLEI--QTEKNKQKIDLDSMENSERIKII 198
DL+E++ + ++R L QA +L QTE++++ + + ++ SER++++
Sbjct: 5008 --DLKEQVAMV-ERRANLLQAETEELRAALEQTERSRKVAEQELLDASERVQLL 5160
>emb|X59552.1|GDVMHC G.domesticus mRNA for ventricular myosin heavy chain
Length = 3263
Score = 41.6 bits (96), Expect = 0.058
Identities = 40/180 (22%), Positives = 86/180 (47%), Gaps = 17/180 (9%)
Frame = +1
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEV-----KVAFEIK 99
R R + +LLE V+ + I Q+K++E I ++NE+EE + K
Sbjct: 2398 RARKLAEHELLEATERVNLLHTQNTSLINQKKKLEGDISQMQNEVEESIQECRNAEQKAK 2577
Query: 100 KLALDRMRLSTALKK------NLEKISR-QSSVLMDNMKHLLELNKLIMK-SQQESWDLE 151
K D ++ LKK +LE++ + + D K L E ++ +K +++ LE
Sbjct: 2578 KAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQKRLDEAEQIALKGGKKQIQKLE 2757
Query: 152 EKLLDIRKK-RLQLKQASESKLLEIQTEKNKQKIDLDSME---NSERIKIIRQNLQMEIK 207
++ ++ + +L++ S+++ + E+ +++ S E N R++ + LQ+++K
Sbjct: 2758 SRVRELENELENELRRNSDAQKGARKFERRIKELTYQSEEDKKNLARMQDLIDKLQLKVK 2937
Score = 41.6 bits (96), Expect = 0.058
Identities = 39/174 (22%), Positives = 87/174 (49%), Gaps = 11/174 (6%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+
Sbjct: 349 EDKVNRLSKAKVKLEQQVDDLEGSLE-----------QEKKVRMDLERAKRKLEGDLKLT 495
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E + L D++++ LKK ++S+ +S + D +++L K I + Q +LEE+L
Sbjct: 496 QESVMDLENDKLQMEEKLKKKEFEMSQLNSKIEDEQAIVMQLQKKIKELQARIEELEEEL 675
Query: 155 LDIRKKRLQL-KQASE--------SKLLEIQTEKNKQKIDLDSMENSERIKIIR 199
R R ++ KQ S+ S+ LE +++++ +E +K+ R
Sbjct: 676 EAERAARAKVEKQRSDLARELEELSERLEGAGGATAAQLEMNKKREAEFLKLAR 837
>dbj|AB057661.1|AB057661 Gallus gallus myosin heavy chain mRNA for myosin heavy chain,
complete cds
Length = 5927
Score = 41.6 bits (96), Expect = 0.058
Identities = 39/162 (24%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + +S ++ QEK+I +E + ++E ++K+
Sbjct: 3064 EDKVNTLTKAKVKLEQQVDDLESSLE-----------QEKKIRMDLERAKRKLEGDLKLT 3210
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E + L D+ +L LKK ++S+ +S + D +L K I + Q +LEE+
Sbjct: 3211 QESVMDLENDKQQLEEKLKKKDFEMSQLNSRIEDQQVTEAQLQKKIKELQARIEELEEE- 3387
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIK 196
L+ ++A+ +K+ EK + ++ + E SER++
Sbjct: 3388 -------LEAERAARAKV-----EKQRAEVSRELEELSERLE 3477
Score = 40.4 bits (93), Expect = 0.13
Identities = 42/162 (25%), Positives = 76/162 (45%), Gaps = 3/162 (1%)
Frame = +1
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALD 104
R+ A+ KQ+ E ++ ++AS++++ + + ++ L+N EE +LD
Sbjct: 4375 RILAEWKQKYEETQAELEASQKES-------RSLSTELFKLKNAYEE----------SLD 4503
Query: 105 RMRLSTALKKNL-EKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQ 163
+ KNL E+I+ + + + K + EL KL + E D++ L +
Sbjct: 4504 NLETLKRENKNLQEEIADLTDQISMSGKTIHELEKLKKALENEKSDIQAALEEAEGAL-- 4677
Query: 164 LKQASESKLLEIQTEKNKQKIDLDS--MENSERIKIIRQNLQ 203
+ ESK L IQ E N+ K D+D E E + +R+N Q
Sbjct: 4678 --EHEESKTLRIQLELNQIKADVDRKLAEKDEEFENLRRNHQ 4797
Score = 38.5 bits (88), Expect = 0.49
Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 7/182 (3%)
Frame = +1
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEV-----KVAFEIK 99
R R +Q+LLE V+ + I Q+K++E I L +E+E+ + K
Sbjct: 5113 RSRKLAEQELLEATERVNLLHSQNTGLINQKKKLETDISQLSSEVEDAVQECRNAEEKAK 5292
Query: 100 KLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
K D ++ LKK + +S ++ MK +E + I Q + E+ L K
Sbjct: 5293 KAITDAAMMAEELKK-----EQDTSAHLERMKKNME--QTIKDLQMRLDEAEQIALKGGK 5451
Query: 160 KRLQLKQASESKLL-EIQTEKNKQKIDLDSMENSE-RIKIIRQNLQMEIKITTVIQHVFQ 217
K++Q +A +L E+ E+ K + E RIK + + + K T +Q +
Sbjct: 5452 KQIQKLEARVRELEGELDMEQKKMAEAQKGIRKYERRIKELSYQTEEDRKNLTRMQDLID 5631
Query: 218 NL 219
L
Sbjct: 5632 KL 5637
>gb|M74087.1|CHKMYOSIND Gallus gallus fast myosin heavy chain mRNA, 3' UTR
Length = 2944
Score = 41.6 bits (96), Expect = 0.058
Identities = 42/174 (24%), Positives = 88/174 (50%), Gaps = 11/174 (6%)
Frame = +3
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+A
Sbjct: 45 EDKVNTLTKAKTKLEQQVDDLEGSLE-----------QEKKLRMDLERAKRKLEGDLKLA 191
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
+ I L D+ +L LKK +IS+ S + D ++L K I + Q + +LEE++
Sbjct: 192 HDSIMDLENDKQQLDEKLKKKDFEISQIQSKIEDEQALGMQLQKKIKELQARTEELEEEI 371
Query: 155 LDIRKKRLQLK--QASESKLLEIQTEKNKQ-------KIDLDSMENSERIKIIR 199
R R + + +A S+ LE +E+ ++ +ID++ +E K+ R
Sbjct: 372 EAERTSRAKAEKHRADLSRELEEISERLEEAGGATAAQIDMNKKREAEFQKMRR 533
Score = 35.4 bits (80), Expect = 4.1
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 18/174 (10%)
Frame = +3
Query: 43 LLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQ-----IEAKIEDLENEIEEVKVAFE 97
+LRL+ + Q KS +D + E+I Q K+ +E+ L+ E+ A
Sbjct: 1677 ILRLQLELNQ----VKSEIDRKIAEKDEEIDQLKRNHLRIVESMQRTLDAEVRSRNEALR 1844
Query: 98 IKKLA---LDRM--------RLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQE 146
+KK L+ M R++ +KNL VL D HL + ++SQ+
Sbjct: 1845 LKKKMEGDLNEMEIQLNHANRMAAEAQKNLRNTQ---GVLKDTQIHLDDA----LRSQE- 2000
Query: 147 SWDLEEKLLDIRKKRLQLKQASESKLLEI--QTEKNKQKIDLDSMENSERIKII 198
DL+E++ + ++R L QA +L QTE++++ + + ++ SER++++
Sbjct: 2001 --DLKEQVAMV-ERRANLLQAETEELRAALEQTERSRKVAEQELLDASERVQLL 2153
>emb|AJ312390.1|MMU312390 Mus musculus mRNA for nonmuscle heavy chain myosin II-A (Myh9 gene)
Length = 7355
Score = 41.6 bits (96), Expect = 0.058
Identities = 46/196 (23%), Positives = 83/196 (41%), Gaps = 22/196 (11%)
Frame = +1
Query: 39 RMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEI 98
++ L + L+A Q + + + SEEK + + Q +++EA++ED E + + +A
Sbjct: 4825 KLRLEVNLQAMKAQFERDLQGRDEQSEEKKKQLVRQVREMEAELED-ERKQRSMAMAAR- 4998
Query: 99 KKLALDRMRLSTAL---KKNLEKISRQSSVLMDNMKHLL------------------ELN 137
KKL +D L + KN E+ +Q L MK + E
Sbjct: 4999 KKLEMDLKDLEAHIDTANKNREEAIKQLRKLQAQMKDCMRELDDTRASREEILAQAKENE 5178
Query: 138 KLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSE-RIK 196
K + + E L+E+L + + Q +Q + EI K + L+ E RI
Sbjct: 5179 KKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEIANSSGKGALALEEKRRLEARIA 5358
Query: 197 IIRQNLQMEIKITTVI 212
++ + L+ E T +I
Sbjct: 5359 LLEEELEEEQGNTELI 5406
Score = 35.0 bits (79), Expect = 5.4
Identities = 35/159 (22%), Positives = 71/159 (44%), Gaps = 4/159 (2%)
Frame = +1
Query: 38 DRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFE 97
D +T LL +L + S +++ + T E + +E + + + ++E+ K +F
Sbjct: 4009 DSVTGLLSQSDSKSSKLTKDFSALESQLQDTQELLQEENRQKLSLSTKLKQMEDEKNSFR 4188
Query: 98 IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDI 157
+++ K+NLEK + +MK +E +++ +E+ +K L+
Sbjct: 4189 ------EQLEEEEEAKRNLEKQIATLHAQVTDMKKKMEDGVGCLETAEEAKRRLQKDLEG 4350
Query: 158 RKKRLQLKQASESKL----LEIQTEKNKQKIDLDSMENS 192
+RL+ K A+ KL +Q E + +DLD S
Sbjct: 4351 LSQRLEEKVAAYDKLEKTKTRLQQELDDLLVDLDHQRQS 4467
Score = 34.3 bits (77), Expect = 9.2
Identities = 43/195 (22%), Positives = 84/195 (43%), Gaps = 36/195 (18%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVK--- 93
E + L+ + Q ++QL + +EE +++++E DLE +EE +
Sbjct: 2776 ETMQSQLMAEKLQLQEQLQAETELCAEAEELRARLTAKKQELEEICHDLEARVEEEEERC 2955
Query: 94 --VAFEIKKLALDRMRLSTALKKNLEKISRQ----SSVLMDNMKHLLELNKLIMKSQQES 147
+ E KK+ + L L++ E+ +RQ V + LE +++IM+ Q
Sbjct: 2956 QYLQAEKKKMQQNIQELEEQLEE--EESARQKLQLEKVTTEAKLKKLEEDQIIMEDQNCK 3129
Query: 148 WDLEEKLLDIR---------------KKRLQLKQASESKLLEI------------QTEKN 180
E+KLL+ R K +LK E+ + ++ + EK
Sbjct: 3130 LAKEKKLLEDRVAEFTTNLMEEEEKSKSLAKLKNKHEAMITDLEERLRREEKQRQELEKT 3309
Query: 181 KQKIDLDSMENSERI 195
++K++ DS + S++I
Sbjct: 3310 RRKLEGDSTDLSDQI 3354
>gb|L03188.1|YSCINTANA Saccharomyces cerevisiae integrin analogue gene, complete cds
Length = 3728
Score = 41.6 bits (96), Expect = 0.058
Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 6/147 (4%)
Frame = +2
Query: 65 EEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSS 124
+EK + +K+ ++ ED+ +I E+K A+ +NLEK+ Q +
Sbjct: 320 KEKDKSNVNHQKETKSLKEDIAAKITEIK-----------------AINENLEKMKIQCN 448
Query: 125 VLMDNMKHLLELNKLIMKSQQESWD-----LEEKLLDIRKKRLQLKQASESKLLEIQTEK 179
L +H+ + + KS+ +S D L EKL + ++ +ES + ++ K
Sbjct: 449 NLSKEKEHISK-ELVEYKSRFQSHDNLVAKLTEKLKSLANNYKDMQAENESLIKAVEESK 625
Query: 180 NKQKIDLDSMENS-ERIKIIRQNLQME 205
N+ I L +++N + + ++N Q+E
Sbjct: 626 NESSIQLSNLQNKIDSMSQEKENFQIE 706
Score = 39.7 bits (91), Expect = 0.22
Identities = 39/187 (20%), Positives = 88/187 (46%), Gaps = 26/187 (13%)
Frame = +2
Query: 38 DRMTLLLRLRAQTKQQLLEYKSMVDASEEK--TPEQIMQEKQIEAKIEDLENEIEEVKVA 95
++++ L + R + + +L YK++ + E K T E+ ++E +++ E ++E K+
Sbjct: 881 NKISELTKTREELEAELAAYKNLKNELETKLETSEKALKE------VKENEEHLKEEKI- 1039
Query: 96 FEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMK---------------HLLELNKLI 140
+++K A + + +L+ NLE + ++ L +K + +LN I
Sbjct: 1040 -QLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEISQLNDEI 1216
Query: 141 MKSQQESWDLEEKLLDIRKKRLQLKQASESK---------LLEIQTEKNKQKIDLDSMEN 191
+QQE+ +++K ++ + +K SE + L +Q ++ K+K + +
Sbjct: 1217 TSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASL 1396
Query: 192 SERIKII 198
E IK I
Sbjct: 1397 LESIKSI 1417
Score = 36.2 bits (82), Expect = 2.4
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 46/216 (21%)
Frame = +2
Query: 38 DRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFE 97
+++T L + + +++ +L K +SEE+ K E ++E L+NEI+ AFE
Sbjct: 1607 EKVTNLSKAKEKSESELSRLKKT--SSEER--------KNAEEQLEKLKNEIQIKNQAFE 1756
Query: 98 IKKLALD----------------------RMRLSTALK--------KNLEKISRQSSVLM 127
++ L+ R++ LK LEK+S + L+
Sbjct: 1757 KERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDELL 1936
Query: 128 DNMKHLLE-LNKLIMKSQQESWDLEEKLL--------DIRKKRLQLKQASESK------L 172
+ ++ ++ L I+ + + +EKLL D+ + QL+ A ESK L
Sbjct: 1937 EEKQNTIKSLQDEILSYKDKITRNDEKLLSIERDSKRDLESLKEQLRAAQESKAKVEEGL 2116
Query: 173 LEIQTEKNKQKIDLD-SMENSERIKIIRQNLQMEIK 207
+++ E +K+K +L+ S E ++++ ++ + E+K
Sbjct: 2117 KKLEEESSKEKAELEKSKEMMKKLESTIESNETELK 2224
>ref|NM_069219.1| Myosin head (motor domain)
Length = 4242
Score = 41.6 bits (96), Expect = 0.058
Identities = 35/149 (23%), Positives = 75/149 (49%), Gaps = 10/149 (6%)
Frame = +1
Query: 52 QQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTA 111
Q+L E ++ D+ +++M++ + I++L+N+I+ K++ E + L +L TA
Sbjct: 2707 QKLRETQNRQDSHYSNLEKEVMEKSSL---IDELQNQIQ--KLSDENNEQRLTIAKLETA 2871
Query: 112 LKKNLEKISRQSSVLMDNMKHLLELNKLIMK----------SQQESWDLEEKLLDIRKKR 161
L+ + +RQ++ + D K + ELN+ I + S ++ +EKL +
Sbjct: 2872 LEDEKARFARQNNTIGDMQKLISELNEKIARFDNIALNERNSTRKIEREKEKLNEELTTA 3051
Query: 162 LQLKQASESKLLEIQTEKNKQKIDLDSME 190
++ Q K+ E++ E K+K + +E
Sbjct: 3052 KEIIQKQAKKIDELKEECRKRKNEASRLE 3138
>ref|NM_012810.1| Rattus norvegicus Synaptonemal complex protein 1 (Sycp1), mRNA
Length = 3561
Score = 41.6 bits (96), Expect = 0.058
Identities = 48/210 (22%), Positives = 101/210 (47%), Gaps = 14/210 (6%)
Frame = +1
Query: 46 LRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDR 105
+R + QQ E K +D SEE + + E +++ LEN+ +K E K ++
Sbjct: 1846 VRKEFIQQGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKSKNIEE 2025
Query: 106 M-RLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQL 164
+ + + ALKK ++Q + + +++NKL ++ EE +++ +K +++
Sbjct: 2026 LHQENKALKKKSSAENKQLNA------YEIKVNKLELELASTKQKFEE-MINNYQKEIEI 2184
Query: 165 KQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQ-NLQMEIKITTVI------QHVFQ 217
K+ SE KLL + EK K +D E +K+ ++ +L+ + KI ++ +H +
Sbjct: 2185 KKISEEKLLG-EVEKAKATVD-------EAVKLQKEIDLRCQHKIAEMVALMEKHKHQYD 2340
Query: 218 NLI------LGSKVNWAEDPALKEIVLQLE 241
++ LG N ++ + ++ L+ E
Sbjct: 2341 KIVEERDSELGLYKNREQEQSSAKVALETE 2430
Score = 37.4 bits (85), Expect = 1.1
Identities = 40/158 (25%), Positives = 81/158 (50%), Gaps = 11/158 (6%)
Frame = +1
Query: 64 SEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLST--ALKKNLEKI-- 119
S EKT + + ++ DL N IE++ +AFE ++ + RL LK++ EKI
Sbjct: 688 SAEKTSKYEYEREETRQVYVDLNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQH 867
Query: 120 -SRQSSVLMDNMKHLLELNKLIMKSQQES--WDLEEKLLDIRKKRLQLKQAS---ESKLL 173
+ ++N ++ + L LI +++E+ DL L + R K QL++ + + L
Sbjct: 868 LEEEYQKEVNNKENQVSL-LLIQSTEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLK 1044
Query: 174 EIQTEKNKQKIDLDSMENS-ERIKIIRQNLQMEIKITT 210
E+ +K+ +L+ ++ S +R ++ L+ +++I T
Sbjct: 1045ELNEKKDHLTSELEDIKMSMQRSMSTQKTLEEDLQIAT 1158
>emb|X67805.1|RNSCP1A R.norvegicus SCP1 mRNA
Length = 3561
Score = 41.6 bits (96), Expect = 0.058
Identities = 48/210 (22%), Positives = 101/210 (47%), Gaps = 14/210 (6%)
Frame = +1
Query: 46 LRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDR 105
+R + QQ E K +D SEE + + E +++ LEN+ +K E K ++
Sbjct: 1846 VRKEFIQQGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKSKNIEE 2025
Query: 106 M-RLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQL 164
+ + + ALKK ++Q + + +++NKL ++ EE +++ +K +++
Sbjct: 2026 LHQENKALKKKSSAENKQLNA------YEIKVNKLELELASTKQKFEE-MINNYQKEIEI 2184
Query: 165 KQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQ-NLQMEIKITTVI------QHVFQ 217
K+ SE KLL + EK K +D E +K+ ++ +L+ + KI ++ +H +
Sbjct: 2185 KKISEEKLLG-EVEKAKATVD-------EAVKLQKEIDLRCQHKIAEMVALMEKHKHQYD 2340
Query: 218 NLI------LGSKVNWAEDPALKEIVLQLE 241
++ LG N ++ + ++ L+ E
Sbjct: 2341 KIVEERDSELGLYKNREQEQSSAKVALETE 2430
Score = 37.4 bits (85), Expect = 1.1
Identities = 40/158 (25%), Positives = 81/158 (50%), Gaps = 11/158 (6%)
Frame = +1
Query: 64 SEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLST--ALKKNLEKI-- 119
S EKT + + ++ DL N IE++ +AFE ++ + RL LK++ EKI
Sbjct: 688 SAEKTSKYEYEREETRQVYVDLNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQH 867
Query: 120 -SRQSSVLMDNMKHLLELNKLIMKSQQES--WDLEEKLLDIRKKRLQLKQAS---ESKLL 173
+ ++N ++ + L LI +++E+ DL L + R K QL++ + + L
Sbjct: 868 LEEEYQKEVNNKENQVSL-LLIQSTEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLK 1044
Query: 174 EIQTEKNKQKIDLDSMENS-ERIKIIRQNLQMEIKITT 210
E+ +K+ +L+ ++ S +R ++ L+ +++I T
Sbjct: 1045ELNEKKDHLTSELEDIKMSMQRSMSTQKTLEEDLQIAT 1158
>dbj|AB025260.1|AB025260 Sus scrofa mRNA for myosin heavy chain 2a, complete cds
Length = 5932
Score = 41.6 bits (96), Expect = 0.058
Identities = 41/185 (22%), Positives = 87/185 (46%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+A
Sbjct: 3088 EDKVNTLTKAKTKLEQQVDDLEGSLE-----------QEKKLRMDLERAKRKLEGDLKLA 3234
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I + ++ +L LKK +IS S + D ++L K I + Q +LEE+
Sbjct: 3235 QESIMDIENEKQQLDEKLKKKEFEISNLQSKIEDEQALAIQLQKKIKELQARIEELEEE- 3411
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
++ ++AS +K EK + + + E SER++ +I++ +
Sbjct: 3412 -------IEAERASRAK-----AEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREA 3555
Query: 215 VFQNL 219
FQ +
Sbjct: 3556 EFQKM 3570
>gb|L27838.1|PFARHPR Plasmodium yoelii rhoptry protein, complete cds
Length = 6991
Score = 41.2 bits (95), Expect = 0.075
Identities = 40/179 (22%), Positives = 89/179 (49%), Gaps = 5/179 (2%)
Frame = +1
Query: 70 EQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSSVLMDN 129
E + + + + K+E+L ++I+ V +I+K+ ++ ++ N+E ++ + +++
Sbjct: 661 EDPIDDIEDKTKLENLRSKIDNVYD--KIQKMEIETVKSHL---NNIETNNKLPNTILEI 825
Query: 130 MKHLL-----ELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKI 184
K++ ELNK++ + + +L K+ D KKR QL + +SK+LEI+ N Q
Sbjct: 826 KKYIYDEISKELNKMLEDFKNKEKELSNKISDYDKKREQLSE-YKSKMLEIRNHYNSQTN 1002
Query: 185 DLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQLEKN 243
++ E + + N M TT+ + + + S+V +D L ++ ++ N
Sbjct: 1003VDNTKEEEAKQNYDKSNEHM----TTIPTNEDEISKIISEVKTMKDEILSKVNTYIDFN 1167
>gb|AF097905.1|AF097905 Rana catesbeiana myosin heavy chain (MHC-2) mRNA, partial cds
Length = 2258
Score = 41.2 bits (95), Expect = 0.075
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 10/190 (5%)
Frame = +2
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEV-----KVAFEIK 99
R R +Q+LL+ + + I +K+ E I L+NE+EE + K
Sbjct: 1409 RSRKLAEQELLDASERLQLLHSQNTSLINNKKKQEGDISQLQNEVEEAVQEARNAEEKAK 1588
Query: 100 KLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
K D ++ LKK + +S ++ MK LE + + Q + E+ L K
Sbjct: 1589 KAITDAALMAEELKK-----EQDTSAHLERMKKNLE--QTVKDLQHRLDEAEQLALKGGK 1747
Query: 160 KRLQLKQASESKLLEIQTE-KNKQKIDLDSMEN----SERIKIIRQNLQMEIKITTVIQH 214
K+L Q ES++ E++ E +N+QK +++++ R+K + + + K +Q
Sbjct: 1748 KQL---QKLESRVRELENELENEQKRGVEAIKGVRKYERRVKELTYQTEEDRKNALRLQD 1918
Query: 215 VFQNLILGSK 224
+ L L K
Sbjct: 1919 LVDKLQLKVK 1948
>gb|AF323443.1|AF323443 Plasmodium yoelii yoelii clone 11 235 kDa rhoptry protein (IIa.2)
gene, partial cds
Length = 8241
Score = 41.2 bits (95), Expect = 0.075
Identities = 40/179 (22%), Positives = 89/179 (49%), Gaps = 5/179 (2%)
Frame = +1
Query: 70 EQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSSVLMDN 129
E + + + + K+E+L ++I+ V +I+K+ ++ ++ N+E ++ + +++
Sbjct: 2011 EDPIDDIEDKTKLENLRSKIDNVYD--KIQKMEIETVKSHL---NNIETNNKLPNTILEI 2175
Query: 130 MKHLL-----ELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKI 184
K++ ELNK++ + + +L K+ D KKR QL + +SK+LEI+ N Q
Sbjct: 2176 KKYIYDEISKELNKMLEDFKNKEKELSNKISDYDKKREQLSE-YKSKMLEIRNHYNSQTN 2352
Query: 185 DLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQLEKN 243
++ E + + N M TT+ + + + S+V +D L ++ ++ N
Sbjct: 2353 VDNTKEEEAKQNYDKSNEHM----TTIPTNEDEISKIISEVKTMKDEILSKVNTYIDFN 2517
>ref|NM_014635.1| Homo sapiens KIAA0336 gene product (KIAA0336), mRNA
Length = 6773
Score = 41.2 bits (95), Expect = 0.075
Identities = 38/156 (24%), Positives = 80/156 (50%), Gaps = 10/156 (6%)
Frame = +2
Query: 36 SEDRMTLLLRLRA-QTKQQLLEY--------KSMVDASEEKTPEQIMQEKQIEAKIEDLE 86
+ D LL R+ Q+ +LLE K+MVD +E E++ +E++I+ +
Sbjct: 3143 NSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVD--KELEAEKLQKEQKIKEHATTV- 3313
Query: 87 NEIEEVKVAFEIKKLALDR-MRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQ 145
NE+EE++V + +K L + M+ +KK+ ++ + + + D + + ELN+ +
Sbjct: 3314 NELEELQVQLQKEKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKELNQKLTNKNN 3493
Query: 146 ESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNK 181
+ DLE+++ ++K+ L++ S +Q + K
Sbjct: 3494 KIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEK 3601
Score = 35.4 bits (80), Expect = 4.1
Identities = 42/202 (20%), Positives = 98/202 (47%), Gaps = 4/202 (1%)
Frame = +2
Query: 50 TKQQLL-EYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRL 108
++Q+L+ E ++ + +EK ++ Q + +++LE +I + E K +++++
Sbjct: 1595 SQQELVPELENTIKNLQEKNGVYLLSLSQRDTMLKELEGKINSLT---EEKDDFINKLKN 1765
Query: 109 STALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIR---KKRLQLK 165
S N K + L +LEL K + ++ Q + +LE+K+ ++ ++ L+ K
Sbjct: 1766 SHEEMDNFHKKCEREERL------ILELGKKVEQTIQYNSELEQKVNELTGGLEETLKEK 1927
Query: 166 QASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKV 225
++ KL ++ + D + + ++E + +N ++ + + + + + L K
Sbjct: 1928 DQNDQKLEKLMVQMKVLSEDKEVL-SAEVKSLYEENNKLSSEKKQLSRDL--EVFLSQK- 2095
Query: 226 NWAEDPALKEIVLQLEKNVDMM 247
ED LKE + QLEK + +M
Sbjct: 2096 ---EDVILKEHITQLEKKLQLM 2152
>dbj|AB002334.1|AB002334 Human mRNA for KIAA0336 gene, complete cds
Length = 6773
Score = 41.2 bits (95), Expect = 0.075
Identities = 38/156 (24%), Positives = 80/156 (50%), Gaps = 10/156 (6%)
Frame = +2
Query: 36 SEDRMTLLLRLRA-QTKQQLLEY--------KSMVDASEEKTPEQIMQEKQIEAKIEDLE 86
+ D LL R+ Q+ +LLE K+MVD +E E++ +E++I+ +
Sbjct: 3143 NSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVD--KELEAEKLQKEQKIKEHATTV- 3313
Query: 87 NEIEEVKVAFEIKKLALDR-MRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQ 145
NE+EE++V + +K L + M+ +KK+ ++ + + + D + + ELN+ +
Sbjct: 3314 NELEELQVQLQKEKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKELNQKLTNKNN 3493
Query: 146 ESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNK 181
+ DLE+++ ++K+ L++ S +Q + K
Sbjct: 3494 KIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEK 3601
Score = 35.4 bits (80), Expect = 4.1
Identities = 42/202 (20%), Positives = 98/202 (47%), Gaps = 4/202 (1%)
Frame = +2
Query: 50 TKQQLL-EYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRL 108
++Q+L+ E ++ + +EK ++ Q + +++LE +I + E K +++++
Sbjct: 1595 SQQELVPELENTIKNLQEKNGVYLLSLSQRDTMLKELEGKINSLT---EEKDDFINKLKN 1765
Query: 109 STALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIR---KKRLQLK 165
S N K + L +LEL K + ++ Q + +LE+K+ ++ ++ L+ K
Sbjct: 1766 SHEEMDNFHKKCEREERL------ILELGKKVEQTIQYNSELEQKVNELTGGLEETLKEK 1927
Query: 166 QASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKV 225
++ KL ++ + D + + ++E + +N ++ + + + + + L K
Sbjct: 1928 DQNDQKLEKLMVQMKVLSEDKEVL-SAEVKSLYEENNKLSSEKKQLSRDL--EVFLSQK- 2095
Query: 226 NWAEDPALKEIVLQLEKNVDMM 247
ED LKE + QLEK + +M
Sbjct: 2096 ---EDVILKEHITQLEKKLQLM 2152
>dbj|AB025261.1|AB025261 Sus scrofa mRNA for myosin heavy chain 2b, complete cds
Length = 5929
Score = 41.2 bits (95), Expect = 0.075
Identities = 40/185 (21%), Positives = 87/185 (46%), Gaps = 2/185 (1%)
Frame = +3
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+A
Sbjct: 3099 EDKVNTLTKAKTKLEQQVDDLEGSLE-----------QEKKLRMDLERAKRKLEGDLKLA 3245
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E + D+ +L LKK ++S S + D ++L K I + Q + +LEE+
Sbjct: 3246 QESTMDIENDKQQLDEKLKKKEFEMSNLQSKIEDEQALAMQLQKKIKELQARTEELEEE- 3422
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
++ ++AS +K EK + + + E SER++ +I++ +
Sbjct: 3423 -------IEAERASRAK-----AEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREA 3566
Query: 215 VFQNL 219
FQ +
Sbjct: 3567 EFQKM 3581
>gb|AF238234.2|AF238234 Entamoeba histolytica diaphanous protein (dia) gene, partial cds
Length = 3246
Score = 41.2 bits (95), Expect = 0.075
Identities = 31/128 (24%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Frame = +1
Query: 75 EKQIEAKIEDLENEIEEVKV--AFEIKKLALDRMRLSTALKKNLEK----ISRQSSVLMD 128
EK + KIE +NE E +K+ F+ KL +++ + ++ ++L K + L
Sbjct: 1258 EKSNKKKIESGDNEEERIKIDEVFDRMKLDWEKVTVDQSILEDLNKKKQDLKNSKEQLQI 1437
Query: 129 NMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDS 188
++ + + K + QE+ ++ ++L D ++K Q+ +ESK + + E+ K+KI+
Sbjct: 1438 TLEKIKTIEKEVSSIDQENSEVNKELNDKKEKIQQID--TESKKINDEIEEVKKKIEQTK 1611
Query: 189 MENSERIK 196
E + + K
Sbjct: 1612 KELASKPK 1635
>dbj|AP003185.1|AP003185 Clostridium perfringens DNA, complete genome, section 1/10
Length = 301450
Score = 41.2 bits (95), Expect = 0.075
Identities = 38/160 (23%), Positives = 82/160 (50%), Gaps = 11/160 (6%)
Frame = +2
Query: 60 MVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAF-EIKKLALDRMRL----STALKK 114
++++ EEK E I++ +IEA +E +IEE+ ++ E+ ++ +R++ LK
Sbjct: 285332 LLESKEEKLKELILEFSKIEATLEYENKKIEELNISIEEVGEVNEERLKFLEEEFNTLKD 285511
Query: 115 NLEKISRQSSVLMDNMKHLLE----LNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASES 170
+E+ + + L +++ L E L + K++ + + +I K +L + +
Sbjct: 285512 KIEEFNLKKENLEKDLEKLKEEKNNLENIFNKAEVILCEKIVREKEIASKIKELDKELKL 285691
Query: 171 KLLEIQTEKNKQKIDLDSMENSERIKIIRQN--LQMEIKI 208
K E+ + KN+ KI+ +EN +K ++ L+ EI+I
Sbjct: 285692 KNSELNSIKNELKIEDIKLENELILKKEKEKNLLEKEIRI 285811
>gb|AF238235.1|AF238235 Entamoeba histolytica diaphanous protein (dia) mRNA, partial cds
Length = 3350
Score = 41.2 bits (95), Expect = 0.075
Identities = 31/128 (24%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Frame = +1
Query: 75 EKQIEAKIEDLENEIEEVKV--AFEIKKLALDRMRLSTALKKNLEK----ISRQSSVLMD 128
EK + KIE +NE E +K+ F+ KL +++ + ++ ++L K + L
Sbjct: 1012 EKSNKKKIESGDNEEERIKIDEVFDRMKLDWEKVTVDQSILEDLNKKKQDLKNSKEQLQI 1191
Query: 129 NMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDS 188
++ + + K + QE+ ++ ++L D ++K Q+ +ESK + + E+ K+KI+
Sbjct: 1192 TLEKIKTIEKEVSSIDQENSEVNKELNDKKEKIQQID--TESKKINDEIEEVKKKIEQTK 1365
Query: 189 MENSERIK 196
E + + K
Sbjct: 1366 KELASKPK 1389
>gb|AF410847.1|AF410847 Ovine herpesvirus 2 latency associated antigen (orf73) gene, complete
cds
Length = 2065
Score = 40.8 bits (94), Expect = 0.098
Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Frame = -1
Query: 51 KQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEI----EEVKVAFEIKKLALDRM 106
K++ LE K V EEK + ++K +E K +DLE + E+ K E +K ++
Sbjct: 1057 KEKDLEEKEKV--LEEKKKDLEEKKKDLEEKKKDLEEKEKVLEEKEKDL*EKEKDLEEKE 884
Query: 107 RLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQ 166
++ KK+LE+ + L + K L E K++ + ++ DLE ++L+ RKK+ + K+
Sbjct: 883 KVLEEKKKDLEEKKKD---LEEKEKDLKEKEKVLEEKEK---DLEAEVLEERKKKRKKKE 722
Query: 167 ASESKLLEIQTEKNKQK 183
K + + +K K+K
Sbjct: 721 KKRKKRKKKRKKKRKKK 671
>ref|NM_078977.1| Drosophila melanogaster toutatis (tou), mRNA
Length = 9314
Score = 40.8 bits (94), Expect = 0.098
Identities = 38/161 (23%), Positives = 75/161 (45%), Gaps = 5/161 (3%)
Frame = +2
Query: 39 RMTLLLRLR---AQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVA 95
R TL + R A+ +Q + + K + + E+ QEK + + + + E++ +
Sbjct: 3155 RQTLNVEQRIEIAKQQQAMRDAKKLQKEELARNKEKARQEKNSKLEQQRKDKELKNQQAV 3334
Query: 96 FEIKKLA--LDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEK 153
E KK LDR++ LKK EK R+ ++ + L + ++++ ++ E +
Sbjct: 3335 EERKKRQEELDRLKQEELLKKQQEKEKRRQEAILAKEQELQKQKEMLLAAEMERERRRQH 3514
Query: 154 LLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSER 194
+ IR L+L++ E + EK K ++ LD + ER
Sbjct: 3515 MSLIR--MLELRRKFEDR------EKKKHQLVLDRLLLRER 3613
>dbj|AB004801.1|AB004801 Gallus gallus mRNA for chick atrial myosin heavy chain, complete cds
Length = 5825
Score = 40.8 bits (94), Expect = 0.098
Identities = 41/185 (22%), Positives = 87/185 (46%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + +S ++ QEK+I +E + ++E ++K+A
Sbjct: 3025 EDKVNTLAKAKGKLEQQVDDLESSLE-----------QEKKIRMDLERAKRKLEGDLKLA 3171
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+ +L LKK +++ ++ + D +L K + + Q +LEE+L
Sbjct: 3172 QESIMDLENDKQQLEERLKKKDFELNTLNARIEDEQAISAQLQKKLKELQARIEELEEEL 3351
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
R R ++++ L E++ E SER++ +++++ +
Sbjct: 3352 EAERTGRAKVEKLRSELLQELE-------------ETSERLEEAGGATSVQLELNKKREA 3492
Query: 215 VFQNL 219
FQ L
Sbjct: 3493 EFQKL 3507
>gb|U32574.1|OCU32574 Oryctolagus cuniculus myosin heavy chain (MHC) mRNA, complete cds
Length = 5988
Score = 40.8 bits (94), Expect = 0.098
Identities = 41/185 (22%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Frame = +2
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK+I +E + ++E ++K+A
Sbjct: 3116 EDKVNTLTKAKTKLEQQVDDLEGSLE-----------QEKKIRMDLERAKRKLEGDLKLA 3262
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E + D+ +L LKK ++S S + D ++L K I + Q +LEE+
Sbjct: 3263 QESTMDIENDKQQLDEKLKKKEFEMSNLQSKIEDEQALAMQLQKKIKELQARIEELEEE- 3439
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
++ ++AS +K EK + + + E SER++ +I++ +
Sbjct: 3440 -------IEAERASRAK-----AEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREA 3583
Query: 215 VFQNL 219
FQ +
Sbjct: 3584 EFQKM 3598
>dbj|D63466.1|D63466 Gallus gallus mRNA for atrial myosin heacy chain, complete cds
Length = 2828
Score = 40.8 bits (94), Expect = 0.098
Identities = 41/185 (22%), Positives = 87/185 (46%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + +S ++ QEK+I +E + ++E ++K+A
Sbjct: 28 EDKVNTLAKAKGKLEQQVDDLESSLE-----------QEKKIRMDLERAKRKLEGDLKLA 174
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+ +L LKK +++ ++ + D +L K + + Q +LEE+L
Sbjct: 175 QESIMDLENDKQQLEERLKKKDFELNTLNARIEDEQAISAQLQKKLKELQARIEELEEEL 354
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
R R ++++ L E++ E SER++ +++++ +
Sbjct: 355 EAERTGRAKVEKLRSELLQELE-------------ETSERLEEAGGATSVQLELNKKREA 495
Query: 215 VFQNL 219
FQ L
Sbjct: 496 EFQKL 510
>dbj|D31822.1|CHKCCSV2 Chicken mRNA for atrial specific myosin heavy chain, partial cds
Length = 1215
Score = 40.8 bits (94), Expect = 0.098
Identities = 41/185 (22%), Positives = 87/185 (46%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + +S ++ QEK+I +E + ++E ++K+A
Sbjct: 28 EDKVNTLAKAKGKLEQQVDDLESSLE-----------QEKKIRMDLERAKRKLEGDLKLA 174
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+ +L LKK +++ ++ + D +L K + + Q +LEE+L
Sbjct: 175 QESIMDLENDKQQLEERLKKKDFELNTLNARIEDEQAISAQLQKKLKELQARIEELEEEL 354
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
R R ++++ L E++ E SER++ +++++ +
Sbjct: 355 EAERTGRAKVEKLRSELLQELE-------------ETSERLEEAGGATSVQLELNKKREA 495
Query: 215 VFQNL 219
FQ L
Sbjct: 496 EFQKL 510
>gb|L32978.1|HAMSYN1A Mesocricetus auratus synaptonemal complex protein (syn1) mRNA,
partial cds
Length = 2792
Score = 40.8 bits (94), Expect = 0.098
Identities = 42/169 (24%), Positives = 85/169 (49%), Gaps = 2/169 (1%)
Frame = +1
Query: 46 LRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDR 105
+R + QQ E K +D SEE + + E +++ LEN+ ++ E K ++
Sbjct: 1294 VRKEFIQQGNEVKCKLDKSEENARSIECEVLKKEKQMKILENKCNNLRKQAENKSKYIEE 1473
Query: 106 M-RLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQL 164
+ + + ALKK S+Q + + +++NKL ++ + +E + D +K +++
Sbjct: 1474 LHQENKALKKKSSAESKQLNA------YEIKVNKLQLELESAKQKFQE-MTDNYQKEIEV 1632
Query: 165 KQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQ-NLQMEIKITTVI 212
K+ SE KLL + EK K +D E +K+ ++ +L+ + KI ++
Sbjct: 1633 KKISEEKLLG-EVEKAKAMVD-------EAVKLQKEIDLRCQHKIAEMV 1755
Score = 34.3 bits (77), Expect = 9.2
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 27/147 (18%)
Frame = +1
Query: 64 SEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLST--ALKKNLEKI-- 119
S EKT + + ++ DL N IE++ +AFE ++ + RL LK++ EKI
Sbjct: 136 SAEKTNKYEYEREETRQVYVDLNNNIEKMILAFEELRVQAENARLDMHFKLKEDHEKIQH 315
Query: 120 ------------SRQSSVLM----DNMKHLLELNKLIMKSQQESWDLEEK-------LLD 156
Q S+L+ + + +L L+ +S+ + LE+K + +
Sbjct: 316 LQEEYKKEVNDKENQVSLLLIQRTEKENKMKDLTFLLEESRDKVNQLEDKTKLQDENVKE 495
Query: 157 IRKKRLQLKQASESKLLEIQTEKNKQK 183
+ KK+ L E + +Q N QK
Sbjct: 496 LNKKKDHLTSELEDTKMSLQRSMNTQK 576
>ref|NM_100211.1| Arabidopsis thaliana chromosome 1 CHR1v12152001 genomic sequence
Length = 1716
Score = 40.8 bits (94), Expect = 0.098
Identities = 49/237 (20%), Positives = 101/237 (41%), Gaps = 32/237 (13%)
Frame = +1
Query: 35 CSEDRMTLLLRLRAQTKQQLL-EYKSMVDASEEKTPEQIMQEKQIEA----------KIE 83
CS D++ ++ K+ LL E +++ + E ++ EK E K+E
Sbjct: 847 CSVDQLEDIIEDAKSNKKNLLTEMETVTNIMREVELKEKDAEKSKEEAARGGLDTLQKVE 1026
Query: 84 DLENEIEEVK----------------VAFEIKKLALDRMRLSTALKKNLEKISRQSSVLM 127
+L+ +E K +A E+K+L + LS K+L + L
Sbjct: 1027 ELKKMLEHAKEANDMHAGEVYGEKSILATEVKELENRLLNLSEERNKSLAILDEMRGSLE 1206
Query: 128 DNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLD 187
+ LEL K K +++ D K L ++ ++ K ESKLL+ + E+N + D
Sbjct: 1207 IRLAAALELKKTAEKEKKDKEDSALKALAEQEANME-KVVQESKLLQQEAEENSKLRDF- 1380
Query: 188 SMENSERIKIIRQNLQMEIKITTVIQHVFQNLI-----LGSKVNWAEDPALKEIVLQ 239
M+ + + ++ + + + +++ F+N + + S + ++K +VL+
Sbjct: 1381 LMDRGQIVDTLQGEISVICQDVKLLKEKFENRVPLTKSISSSFTSSCGSSMKSLVLE 1551
>gb|AF207528.1|AF207528 Gallus gallus cardiac muscle factor 1 (CMF1) mRNA, partial cds
Length = 1156
Score = 40.8 bits (94), Expect = 0.098
Identities = 27/116 (23%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 97 EIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELN--KLIMKSQQESWDLEEKL 154
EI+ L + L+ +LK+ + + + DN+ +++LN K ++S+ + W K
Sbjct: 2 EIEHLKSTKEELNNSLKRANQTLGELLKLKADNINTIVQLNKEKEFVQSEVQLWIKSCKQ 181
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITT 210
++ K+ LQ + A +LL+ + + +K D +E +K+ + LQ +++ T
Sbjct: 182 MEQEKEVLQKQLAEYEELLKKKNQSVSEKEGTDENAITEEMKLELEELQKAVEVKT 349
>emb|Z83107.1|CEF32A7 Caenorhabditis elegans cosmid F32A7, complete sequence
Length = 33516
Score = 40.4 bits (93), Expect = 0.13
Identities = 37/155 (23%), Positives = 77/155 (48%), Gaps = 6/155 (3%)
Frame = -2
Query: 49 QTKQQLLEYKSMVDASEEKT----PEQIMQEKQIEAKIEDLENEIE-EVKVAFE-IKKLA 102
Q+++ +++ V A E+T + + +EK+ A ++ + ++E E+K+A E I +
Sbjct: 33311 QSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELKIAQENIDESG 33132
Query: 103 LDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRL 162
R L LKK ++ SS L D + +L + I Q +LEE+L + R+ R
Sbjct: 33131 RQRHDLENNLKKKESELHSVSSRLEDEQALVSKLQRQIKDGQSRISELEEELENERQSRS 32952
Query: 163 QLKQASESKLLEIQTEKNKQKIDLDSMENSERIKI 197
+ +A L+ + E+ +K+D + ++++
Sbjct: 32951 KADRAKSD--LQRELEELGEKLDEQGGATAAQVEV 32853
>gb|AC006601.1|AC006601 Arabidopsis thaliana chromosome V map near 60.5 cM, complete sequence
Length = 110684
Score = 40.4 bits (93), Expect = 0.13
Identities = 27/101 (26%), Positives = 58/101 (56%), Gaps = 6/101 (5%)
Frame = -1
Query: 60 MVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRL---STA---LK 113
+V+ E KTPE++ +E++ + + ++ E E EE +V E+KK + ++ STA +
Sbjct: 66872 VVEEMEPKTPEKVEEEEEEDEEEDEEEEEEEEEEVVVEVKKKKKGKAKIEHSSTAPPEFR 66693
Query: 114 KNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
+ + K S +S ++ MK L E++ +K+ + + ++ + L
Sbjct: 66692 RAVAKTSAAASSSVNLMKILDEIDDRFLKASECAQEVSKML 66570
>gb|L03534.1|ENHMHCAX Entamoeba histolytica myosin heavy chain (mhcA) gene, complete cds
Length = 6941
Score = 40.4 bits (93), Expect = 0.13
Identities = 35/153 (22%), Positives = 79/153 (50%), Gaps = 3/153 (1%)
Frame = +2
Query: 51 KQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLST 110
K++L E +A+E + ++EAKI+DLE++I E++ ++ LD+ L+
Sbjct: 2987 KKKLAEEIKKREAAENALASATAKTGELEAKIQDLEDKISELE--SKLSAAELDKQELNL 3160
Query: 111 ALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASES 170
+ +NLE+ + +DN+K L+ +KL + DLE ++ ++ + L +
Sbjct: 3161 KI-ENLEEDKEELKETIDNLKGDLKDSKL------KGEDLEVEITELNSQINTLNATVDK 3319
Query: 171 K---LLEIQTEKNKQKIDLDSMENSERIKIIRQ 200
K + E+Q ++++ ++ ++ IK++ +
Sbjct: 3320 KDKTIAEMQESIDEKEDEITKLKGD--IKLLEE 3412
>gb|AC002130.2|AC002130 Genomic sequence for Arabidopsis thaliana BAC F1N21 from chromosome I,
complete sequence
Length = 114738
Score = 40.4 bits (93), Expect = 0.13
Identities = 36/205 (17%), Positives = 90/205 (43%), Gaps = 35/205 (17%)
Frame = -1
Query: 36 SEDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVA 95
+E+ + LRL+ + K+Q+ + +S + +++ + Q + E + E+L+ + K+
Sbjct: 16611 TEEERSEYLRLQTELKEQIEKCRSQQELLQKEAEDLKAQRESFEKEWEELDER--KAKIG 16438
Query: 96 FEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWD------ 149
E+K + + +L + E++ ++ +NM+ LE ++ S E+ +
Sbjct: 16437 NELKNITDQKEKLERHIHLEEERLKKEKQAANENMERELETLEVAKASFAETMEYERSML 16258
Query: 150 -----------------------------LEEKLLDIRKKRLQLKQASESKLLEIQTEKN 180
LEEK +++ K+ ++ E +L I ++
Sbjct: 16257 SKKAESERSQLLHDIEMRKRKLESDMQTILEEKERELQAKKKLFEEEREKELSNINYLRD 16078
Query: 181 KQKIDLDSMENSERIKIIRQNLQME 205
+ ++ M+N ER +I ++ L+++
Sbjct: 16077 VARREMMDMQN-ERQRIEKEKLEVD 16006
>emb|Z48434.1|LCVICNC L.culinaris gene for vicilin type C
Length = 1690
Score = 40.4 bits (93), Expect = 0.13
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Frame = +2
Query: 97 EIKKLALDRMRLSTALKKNLEKISRQSS----VLMDNMKHLLELNKLIMKSQQESWDLEE 152
EI+K+ + T +K L+ QS ++ + K + EL K S ++S E
Sbjct: 812 EIEKILFEEHEKETHHRKGLKDKKHQSQEENVIVKISRKQIEELTKNAKSSSKKSVSSES 991
Query: 153 KLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQN 201
+ ++R R + K EI EKN Q DLD NS IK + QN
Sbjct: 992 EPFNLRS-RDPIYSNKFGKFFEITPEKNPQLRDLDIFVNSVEIKEVYQN 1135
>ref|NM_061195.1| myosin heavy chain
Length = 5892
Score = 40.4 bits (93), Expect = 0.13
Identities = 37/155 (23%), Positives = 77/155 (48%), Gaps = 6/155 (3%)
Frame = +1
Query: 49 QTKQQLLEYKSMVDASEEKT----PEQIMQEKQIEAKIEDLENEIE-EVKVAFE-IKKLA 102
Q+++ +++ V A E+T + + +EK+ A ++ + ++E E+K+A E I +
Sbjct: 3058 QSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELKIAQENIDESG 3237
Query: 103 LDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRL 162
R L LKK ++ SS L D + +L + I Q +LEE+L + R+ R
Sbjct: 3238 RQRHDLENNLKKKESELHSVSSRLEDEQALVSKLQRQIKDGQSRISELEEELENERQSRS 3417
Query: 163 QLKQASESKLLEIQTEKNKQKIDLDSMENSERIKI 197
+ +A L+ + E+ +K+D + ++++
Sbjct: 3418 KADRAKSD--LQRELEELGEKLDEQGGATAAQVEV 3516
>dbj|AP000985.1|AP000985 Sulfolobus tokodaii genomic DNA, complete sequence, section:5/10
Length = 262050
Score = 40.4 bits (93), Expect = 0.13
Identities = 43/192 (22%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Frame = +1
Query: 43 LLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLA 102
L +LR + ++ + + + + EK +QI+ E+L+ + EE+K + K+
Sbjct: 196558 LRKLREERQKIIENIRKLREKRREKVDRLRSIREQIKQLREELKAKSEEIKQLSQQKQSL 196737
Query: 103 LDRMRLSTALKKNLEKISRQSSVL--MDNMKHLLELNKLIMKSQQESWDLE--------- 151
+ ++ + +KK E+I V +D ++ L ++ +L + Q S LE
Sbjct: 196738 I---QVISEIKKEFEQIKNVEKVKEKLDPLQILKKIEQLEWRLQTSSLSLEEEKKIILKI 196908
Query: 152 ---EKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKI 208
EK L+ KK QLK+ K E + E ++++L ++ +RI +R + ++KI
Sbjct: 196909 ANLEKKLETAKKLAQLKE----KNTENRAELLAKRVELSTIR--QRIVELRNQISEKVKI 197070
Query: 209 TTVIQHVFQNLI 220
+++ +L+
Sbjct: 197071 YQQLKNERDSLV 197106
>gb|AF272034.1|AF272034 Gallus gallus fast myosin heavy chain isoform 3 mRNA, complete cds
Length = 6010
Score = 40.4 bits (93), Expect = 0.13
Identities = 42/174 (24%), Positives = 87/174 (49%), Gaps = 11/174 (6%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+A
Sbjct: 3112 EDKVNTLTKAKTKLEQQVDDLEGSLE-----------QEKKLRMDLERAKRKLEGDLKLA 3258
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
+ I L D+ +L LKK +IS+ S + D ++L K I + Q +LEE++
Sbjct: 3259 HDSIMDLENDKQQLDEKLKKKDFEISQIQSKIEDEQALGMQLQKKIKELQARIEELEEEI 3438
Query: 155 LDIRKKRLQLK--QASESKLLEIQTEKNKQ-------KIDLDSMENSERIKIIR 199
R R + + +A S+ LE +E+ ++ +ID++ +E K+ R
Sbjct: 3439 EAERTSRAKAEKHRADLSRELEEISERLEEAGGATAAQIDMNKKREAEFQKMRR 3600
Score = 34.3 bits (77), Expect = 9.2
Identities = 32/163 (19%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Frame = +1
Query: 43 LLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQ-----IEAKIEDLENEIEEVKVAFE 97
+LRL+ + Q KS +D + E+I Q K+ +E+ L+ EI A
Sbjct: 4744 ILRLQLELNQ----VKSEIDRKIAEKDEEIDQLKRNHLRIVESLQSSLDAEIRSRNEALR 4911
Query: 98 IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDI 157
+KK + + +++ ++ + N + +L+ ++ + + ++ ++ + +
Sbjct: 4912 LKKKMEGDLNEMEIQLSHANRVAAEAQKNLRNTQAVLKDTQIHLDDALRTQEVLKEQVAM 5091
Query: 158 RKKRLQLKQASESKLLEI--QTEKNKQKIDLDSMENSERIKII 198
++R L QA +L QTE++++ + + M+ SER++++
Sbjct: 5092 VERRANLLQAEIEELRAALEQTERSRKVAEQELMDASERVQLL 5220
>dbj|AB059398.1|AB059398 Bos taurus MyHC-2a mRNA for myosin heavy chain 2a, complete cds
Length = 5965
Score = 40.4 bits (93), Expect = 0.13
Identities = 41/185 (22%), Positives = 87/185 (46%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+A
Sbjct: 3067 EDKVNTLTKAKTKLEQQVDDLEGSLE-----------QEKKLRMDLERAKRKLEGDLKLA 3213
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I + ++ +L LKK +IS S + D ++L K I + Q +LEE+
Sbjct: 3214 QESIMDIENEKQQLDEKLKKKEFEISNLQSKIEDEQALGIQLQKKIKELQARIEELEEE- 3390
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
++ ++AS +K EK + + + E SER++ +I++ +
Sbjct: 3391 -------IEAERASRAK-----AEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREA 3534
Query: 215 VFQNL 219
FQ +
Sbjct: 3535 EFQKM 3549
>ref|XM_028495.1| Homo sapiens hypothetical protein FLJ22037 (FLJ22037), mRNA
Length = 2265
Score = 40.4 bits (93), Expect = 0.13
Identities = 33/195 (16%), Positives = 89/195 (44%), Gaps = 25/195 (12%)
Frame = +1
Query: 36 SEDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVA 95
+E+R+T +++ + + Q+ + + ++ E ++++E ++ DL+ ++E ++
Sbjct: 319 AEERLTWMMKTKMDLESQISDMRERLEEEEGMAASLSAAKRKLEGELSDLKRDLEGLETT 498
Query: 96 F---EIKKLALD-RMRLSTA----LKKNLEKISRQSSVLM--------------DNMKHL 133
E +K ALD ++R T + ++ K+ ++ L D + HL
Sbjct: 499 LAKTEKEKQALDHKVRTLTGDLSLREDSITKLQKEKRALEELHQKTLDDLQAEEDKVNHL 678
Query: 134 LELNKLI---MKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSME 190
+ N + + +++W+ E+K+ +K + ++ ++ E + K+DL+ +
Sbjct: 679 TKNNSKLSTQIHELEDNWEQEKKIRAEVEKARRKAESDLKMTIDNLNEMERSKLDLEEVV 858
Query: 191 NSERIKIIRQNLQME 205
++I N + E
Sbjct: 859 KKRDLEINSVNSKYE 903
Score = 39.7 bits (91), Expect = 0.22
Identities = 35/157 (22%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Frame = +1
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQI---EAKIEDLENEIEEVKVAFEIKKL 101
RL+A+ + ++ + A+ +Q + +K + + K E+L+ E++ + E +
Sbjct: 1789 RLQAEVEDLTIDLEKANAAAAALDKKQRLFDKMLAEWQQKCEELQVEVDSSQK--ECRMY 1962
Query: 102 ALDRMRLSTALKKNLE---KISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIR 158
+ ++ TA +++LE + +++ L + +K L++ +S E L++KL ++
Sbjct: 1963 MTESFKIKTAYEESLEHLESVKKENKTLQEEIKDLIDQLGEGGRSVHELQKLKKKL-EME 2139
Query: 159 KKRLQLK--------QASESKLLEIQTEKNKQKIDLD 187
K+ LQ+ + ESK++ IQ E + K D+D
Sbjct: 2140 KEELQVALEEAESSLEVEESKVIRIQLELAQVKADID 2250
>ref|NM_078529.1| Drosophila melanogaster TATA box binding protein-related factor 2
(Trf2), mRNA
Length = 3936
Score = 40.4 bits (93), Expect = 0.13
Identities = 37/160 (23%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Frame = +3
Query: 50 TKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLS 109
+K+QLL Y+ + ++ P++ +++ + K+ E +++ K + K+L ++ RL
Sbjct: 345 SKEQLLLYEYLKLLLQKFFPQEQQEKRLQQEKLLQQEKLLQQEKRLQQEKRLQQEK-RLQ 521
Query: 110 TALKKNLEKISRQSSVLMDN----------MKHLLELNKLIMKS---QQESWDLEEKLLD 156
+ EK+ +Q +L + LL+ KL+ + QQE +E+ L
Sbjct: 522 QEKRLQQEKLLQQQKLLQQQKLLQQEKLLQQQKLLQQEKLLQQEKLLQQEKHLPQERQLQ 701
Query: 157 IRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIK 196
K LQL+Q + K LE Q E+ + + E+++
Sbjct: 702 QDKVFLQLRQLQQKKELEEQRERKRHLFEQQKQFVLEKLR 821
Score = 34.3 bits (77), Expect = 9.2
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Frame = +3
Query: 65 EEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSS 124
EE PEQ +Q KQ + ++ + +++ V + K + +++ L LK L+K Q
Sbjct: 237 EEGQPEQDLQLKQQQKHLKKYQ-KLQLVVFWHQEKFFSKEQLLLYEYLKLLLQKFFPQEQ 413
Query: 125 VLMD-NMKHLLELNKLIMKS---QQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKN 180
+ LL+ KL+ + QQE +EK L K+ Q K + KLL+ Q
Sbjct: 414 QEKRLQQEKLLQQEKLLQQEKRLQQEKRLQQEKRLQQEKRLQQEKLLQQQKLLQQQKLLQ 593
Query: 181 KQKIDLDSMENSERIKIIRQN--LQME 205
++K+ L + ++ K+++Q LQ E
Sbjct: 594 QEKL-LQQQKLLQQEKLLQQEKLLQQE 671
>gb|J01050.1|CELMYUNC Caenorhabditis elegans myosin heavy chain (unc54) gene, complete cds
Length = 9000
Score = 40.4 bits (93), Expect = 0.13
Identities = 37/155 (23%), Positives = 77/155 (48%), Gaps = 6/155 (3%)
Frame = +3
Query: 49 QTKQQLLEYKSMVDASEEKT----PEQIMQEKQIEAKIEDLENEIE-EVKVAFE-IKKLA 102
Q+++ +++ V A E+T + + +EK+ A ++ + ++E E+K+A E I +
Sbjct: 5187 QSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELKIAQENIDESG 5366
Query: 103 LDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRL 162
R L LKK ++ SS L D + +L + I Q +LEE+L + R+ R
Sbjct: 5367 RQRHDLENNLKKKESELHSVSSRLEDEQALVSKLQRQIKDGQSRISELEEELENERQSRS 5546
Query: 163 QLKQASESKLLEIQTEKNKQKIDLDSMENSERIKI 197
+ +A L+ + E+ +K+D + ++++
Sbjct: 5547 KADRAKSD--LQRELEELGEKLDEQGGATAAQVEV 5645
>gb|AF136569.1|AF136569 Drosophila melanogaster TATA box binding protein-related factor 2
(Trf2) mRNA, complete cds
Length = 3936
Score = 40.4 bits (93), Expect = 0.13
Identities = 37/160 (23%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Frame = +3
Query: 50 TKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLS 109
+K+QLL Y+ + ++ P++ +++ + K+ E +++ K + K+L ++ RL
Sbjct: 345 SKEQLLLYEYLKLLLQKFFPQEQQEKRLQQEKLLQQEKLLQQEKRLQQEKRLQQEK-RLQ 521
Query: 110 TALKKNLEKISRQSSVLMDN----------MKHLLELNKLIMKS---QQESWDLEEKLLD 156
+ EK+ +Q +L + LL+ KL+ + QQE +E+ L
Sbjct: 522 QEKRLQQEKLLQQQKLLQQQKLLQQEKLLQQQKLLQQEKLLQQEKLLQQEKHLPQERQLQ 701
Query: 157 IRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIK 196
K LQL+Q + K LE Q E+ + + E+++
Sbjct: 702 QDKVFLQLRQLQQKKELEEQRERKRHLFEQQKQFVLEKLR 821
Score = 34.3 bits (77), Expect = 9.2
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Frame = +3
Query: 65 EEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSS 124
EE PEQ +Q KQ + ++ + +++ V + K + +++ L LK L+K Q
Sbjct: 237 EEGQPEQDLQLKQQQKHLKKYQ-KLQLVVFWHQEKFFSKEQLLLYEYLKLLLQKFFPQEQ 413
Query: 125 VLMD-NMKHLLELNKLIMKS---QQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKN 180
+ LL+ KL+ + QQE +EK L K+ Q K + KLL+ Q
Sbjct: 414 QEKRLQQEKLLQQEKLLQQEKRLQQEKRLQQEKRLQQEKRLQQEKLLQQQKLLQQQKLLQ 593
Query: 181 KQKIDLDSMENSERIKIIRQN--LQME 205
++K+ L + ++ K+++Q LQ E
Sbjct: 594 QEKL-LQQQKLLQQEKLLQQEKLLQQE 671
>dbj|AK025690.1|AK025690 Homo sapiens cDNA: FLJ22037 fis, clone HEP08868
Length = 2282
Score = 40.4 bits (93), Expect = 0.13
Identities = 33/195 (16%), Positives = 89/195 (44%), Gaps = 25/195 (12%)
Frame = +1
Query: 36 SEDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVA 95
+E+R+T +++ + + Q+ + + ++ E ++++E ++ DL+ ++E ++
Sbjct: 319 AEERLTWMMKTKMDLESQISDMRERLEEEEGMAASLSAAKRKLEGELSDLKRDLEGLETT 498
Query: 96 F---EIKKLALD-RMRLSTA----LKKNLEKISRQSSVLM--------------DNMKHL 133
E +K ALD ++R T + ++ K+ ++ L D + HL
Sbjct: 499 LAKTEKEKQALDHKVRTLTGDLSLREDSITKLQKEKRALEELHQKTLDDLQAEEDKVNHL 678
Query: 134 LELNKLI---MKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSME 190
+ N + + +++W+ E+K+ +K + ++ ++ E + K+DL+ +
Sbjct: 679 TKNNSKLSTQIHELEDNWEQEKKIRAEVEKARRKAESDLKMTIDNLNEMERSKLDLEEVV 858
Query: 191 NSERIKIIRQNLQME 205
++I N + E
Sbjct: 859 KKRDLEINSVNSKYE 903
Score = 40.0 bits (92), Expect = 0.17
Identities = 36/166 (21%), Positives = 83/166 (49%), Gaps = 14/166 (8%)
Frame = +1
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQI---EAKIEDLENEIEEVKVAFEIKKL 101
RL+A+ + ++ + A+ +Q + +K + + K E+L+ E++ + E +
Sbjct: 1789 RLQAEVEDLTIDLEKANAAAAALDKKQRLFDKMLAEWQQKCEELQVEVDSSQK--ECRMY 1962
Query: 102 ALDRMRLSTALKKNLE---KISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIR 158
+ ++ TA +++LE + +++ L + +K L++ +S E L++KL ++
Sbjct: 1963 MTESFKIKTAYEESLEHLESVKKENKTLQEEIKDLIDQLGEGGRSVHELQKLKKKL-EME 2139
Query: 159 KKRLQLK--------QASESKLLEIQTEKNKQKIDLDSMENSERIK 196
K+ LQ+ + ESK++ IQ E + K D+D + ++ K
Sbjct: 2140 KEELQVALEEAESSLEVEESKVIRIQLELAQVKADIDRRIHEKKKK 2277
>ref|NM_122470.1| Arabidopsis thaliana chromosome 5 CHR5v12152001 genomic sequence
Length = 2328
Score = 40.4 bits (93), Expect = 0.13
Identities = 27/101 (26%), Positives = 58/101 (56%), Gaps = 6/101 (5%)
Frame = +1
Query: 60 MVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRL---STA---LK 113
+V+ E KTPE++ +E++ + + ++ E E EE +V E+KK + ++ STA +
Sbjct: 766 VVEEMEPKTPEKVEEEEEEDEEEDEEEEEEEEEEVVVEVKKKKKGKAKIEHSSTAPPEFR 945
Query: 114 KNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
+ + K S +S ++ MK L E++ +K+ + + ++ + L
Sbjct: 946 RAVAKTSAAASSSVNLMKILDEIDDRFLKASECAQEVSKML 1068
>gb|U26360.1|OCU26360 Oryctolagus cuniculus A-kinase anchoring protein AKAP120 mRNA,
complete cds
Length = 3560
Score = 40.4 bits (93), Expect = 0.13
Identities = 53/203 (26%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Frame = +2
Query: 62 DASEEKTPEQIMQEKQIEAKIEDLENEIEEVK---VAFEIKK----LALDRMRLSTAL-K 113
DA + K E E+Q+E E+LEN+ EEV+ + EI+K L + L K
Sbjct: 611 DAIDRKEKEITNLEEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFK 790
Query: 114 KNLEKIS---RQSSVLMDNMKHLL--ELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQAS 168
+EK+ ++S + + +L + ++I + + E L E+++ +++ QLK +
Sbjct: 791 DEMEKLGFAIKESDAVSPQDQQVLFGKFAQIIHEKEVEIDRLNEQIIKLQQ---QLKITT 961
Query: 169 ESKLLEIQTEKNKQKIDLDS-----MENSERIKIIRQNLQMEI-KITTVIQHVFQNLILG 222
++K++E EKN+ DL++ M + ER +R+N + EI ++ VI+ + Q L
Sbjct: 962 DNKVIE---EKNELIRDLEAQIECLMSDQER---VRKNREEEIEQLNEVIEKLQQELANI 1123
Query: 223 SKVNWAEDPALKEIVLQLEKNVD 245
+ + +L E L+ +D
Sbjct: 1124DQKTSVDPSSLSEEADSLKHQLD 1192
>emb|Z48437.1|LCOVICN L.culinaris orientalis gene for vicilin
Length = 1693
Score = 40.4 bits (93), Expect = 0.13
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Frame = +2
Query: 97 EIKKLALDRMRLSTALKKNLEKISRQSS----VLMDNMKHLLELNKLIMKSQQESWDLEE 152
EI+K+ + T +K L+ +QS ++ + K + EL K S ++S E
Sbjct: 815 EIEKILFEEHEKETHHRKGLKDKKQQSQEENVIVKLSRKQIEELTKNAKSSSKKSVSSES 994
Query: 153 KLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQN 201
+ ++R R + K EI EKN Q DLD NS IK + QN
Sbjct: 995 EPFNLRS-RDPIYSNKFGKFFEITPEKNPQLRDLDIFVNSVEIKEVYQN 1138
>ref|NM_105392.1| Arabidopsis thaliana chromosome 1 CHR1v12152001 genomic sequence
Length = 3709
Score = 40.4 bits (93), Expect = 0.13
Identities = 36/205 (17%), Positives = 90/205 (43%), Gaps = 35/205 (17%)
Frame = +1
Query: 36 SEDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVA 95
+E+ + LRL+ + K+Q+ + +S + +++ + Q + E + E+L+ + K+
Sbjct: 1435 TEEERSEYLRLQTELKEQIEKCRSQQELLQKEAEDLKAQRESFEKEWEELDER--KAKIG 1608
Query: 96 FEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWD------ 149
E+K + + +L + E++ ++ +NM+ LE ++ S E+ +
Sbjct: 1609 NELKNITDQKEKLERHIHLEEERLKKEKQAANENMERELETLEVAKASFAETMEYERSML 1788
Query: 150 -----------------------------LEEKLLDIRKKRLQLKQASESKLLEIQTEKN 180
LEEK +++ K+ ++ E +L I ++
Sbjct: 1789 SKKAESERSQLLHDIEMRKRKLESDMQTILEEKERELQAKKKLFEEEREKELSNINYLRD 1968
Query: 181 KQKIDLDSMENSERIKIIRQNLQME 205
+ ++ M+N ER +I ++ L+++
Sbjct: 1969 VARREMMDMQN-ERQRIEKEKLEVD 2040
>dbj|AB015485.1|AB015485 Dugesia japonica mRNA for myosin heavy chain, partial cds
Length = 5348
Score = 40.0 bits (92), Expect = 0.17
Identities = 45/198 (22%), Positives = 92/198 (45%), Gaps = 3/198 (1%)
Frame = +3
Query: 51 KQQLLEYKSMVDASEEKTPEQIMQEKQI--EAKIEDLENEIEEVKVAFEIKKLALDRMRL 108
+QQLLE ++ VD E+ +++ E+ + E K+ + E+EEV+ + ++ R
Sbjct: 4314 QQQLLEMQAQVD--EQHHQRELVSEQLVLAERKLTMMNGELEEVRNMCD----HAEKNRK 4475
Query: 109 STALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQAS 168
+ +KN E + + + + + N + KL DLEE + R+ QLK+A
Sbjct: 4476 AAESEKN-EAVDKLNELSIQNSSFMAAKRKLETDLSAMQADLEEATNEGRQANEQLKKAI 4652
Query: 169 ESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIK-ITTVIQHVFQNLILGSKVNW 227
K +Q E++++ + R+N + ++K + T + N + G K
Sbjct: 4653 FDNTRLFDEIKQEQ-------EHAQQAEKARKNFESQLKDLQTKLDEAEANALKGGKKAL 4811
Query: 228 AEDPALKEIVLQLEKNVD 245
++ L++ + +LE +D
Sbjct: 4812 SK---LEQRIRELEGELD 4856
>gb|U87231.1|GGU87231 Gallus gallus myosin heavy chain mRNA, complete cds
Length = 5874
Score = 40.0 bits (92), Expect = 0.17
Identities = 38/162 (23%), Positives = 80/162 (48%), Gaps = 2/162 (1%)
Frame = +2
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+A
Sbjct: 3068 EDKVNTLTKAKTKLEQQVDDLEGSLE-----------QEKKLRMDLERAKRKLEGDLKLA 3214
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
+ I L D+ +L LKK +IS+ S + D ++L K I + Q +LEE+
Sbjct: 3215 HDSIMDLENDKQQLDEKLKKKDFEISQIQSKIEDEQALGMQLQKKIKELQARIEELEEE- 3391
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIK 196
++ ++ S +K EK++ + + E SER++
Sbjct: 3392 -------IEAERTSRAK-----AEKHRADLSRELEEISERLE 3481
>ref|XM_012618.3| Homo sapiens myosin, heavy polypeptide 2, skeletal muscle, adult
(MYH2), mRNA
Length = 5956
Score = 40.0 bits (92), Expect = 0.17
Identities = 41/185 (22%), Positives = 87/185 (46%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+A
Sbjct: 3058 EDKVNTLTKAKIKLEQQVDDLEGSLE-----------QEKKLRMDLERAKRKLEGDLKLA 3204
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I + ++ +L LKK +IS S + D ++L K I + Q +LEE+
Sbjct: 3205 QESIMDIENEKQQLDEKLKKKEFEISNLQSKIEDEQALGIQLQKKIKELQARIEELEEE- 3381
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
++ ++AS +K EK + + + E SER++ +I++ +
Sbjct: 3382 -------IEAERASRAK-----AEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREA 3525
Query: 215 VFQNL 219
FQ +
Sbjct: 3526 EFQKM 3540
>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence,
complete sequence
Length = 140064
Score = 40.0 bits (92), Expect = 0.17
Identities = 44/188 (23%), Positives = 90/188 (47%), Gaps = 14/188 (7%)
Frame = -1
Query: 72 IMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKN-----LEKISRQSSVL 126
+ ++ E++I L+ E E+ EI+K L ++ L KN E+++R +
Sbjct: 30972 VKEKSDRESEIRVLKGEAIELTGKVEIEKEQLRKVCDERDLIKNGFDLQHEEVNRLKECV 30793
Query: 127 MDNMKHLLELNKLIMKSQQESWDL-------EEKLLDIRKKRLQLKQASESKLLEIQTEK 179
+ + L +I K + E+ L EE++ ++K+++ L++ E K EI K
Sbjct: 30792 VRLEEKESNLEIVIGKLESENERLVKERKVREEEIEGVKKEKIGLEKIMEEKKNEIDGLK 30613
Query: 180 NKQKIDLDSMENSERIKIIRQNL--QMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIV 237
+ K+ L E +KI ++ + ++E K+ + + V + E+ L+++V
Sbjct: 30612 REIKVLLSEKNEMEIVKIEQKGVIEELERKLDKLNETV--------RSLTKEEKVLRDLV 30457
Query: 238 LQLEKNVD 245
+ LEKN+D
Sbjct: 30456 IGLEKNLD 30433
>ref|NM_017534.1| Homo sapiens myosin, heavy polypeptide 2, skeletal muscle, adult
(MYH2), mRNA
Length = 5956
Score = 40.0 bits (92), Expect = 0.17
Identities = 41/185 (22%), Positives = 87/185 (46%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+A
Sbjct: 3058 EDKVNTLTKAKIKLEQQVDDLEGSLE-----------QEKKLRMDLERAKRKLEGDLKLA 3204
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I + ++ +L LKK +IS S + D ++L K I + Q +LEE+
Sbjct: 3205 QESIMDIENEKQQLDEKLKKKEFEISNLQSKIEDEQALGIQLQKKIKELQARIEELEEE- 3381
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
++ ++AS +K EK + + + E SER++ +I++ +
Sbjct: 3382 -------IEAERASRAK-----AEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREA 3525
Query: 215 VFQNL 219
FQ +
Sbjct: 3526 EFQKM 3540
>gb|AF111784.1|AF111784 Homo sapiens myosin heavy chain IIa mRNA, complete cds
Length = 5956
Score = 40.0 bits (92), Expect = 0.17
Identities = 41/185 (22%), Positives = 87/185 (46%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+A
Sbjct: 3058 EDKVNTLTKAKIKLEQQVDDLEGSLE-----------QEKKLRMDLERAKRKLEGDLKLA 3204
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I + ++ +L LKK +IS S + D ++L K I + Q +LEE+
Sbjct: 3205 QESIMDIENEKQQLDEKLKKKEFEISNLQSKIEDEQALGIQLQKKIKELQARIEELEEE- 3381
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
++ ++AS +K EK + + + E SER++ +I++ +
Sbjct: 3382 -------IEAERASRAK-----AEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREA 3525
Query: 215 VFQNL 219
FQ +
Sbjct: 3526 EFQKM 3540
>gb|U53862.1|CCU53862 Coturnix coturnix slow myosin heavy chain 3 mRNA, complete cds
Length = 5957
Score = 40.0 bits (92), Expect = 0.17
Identities = 40/185 (21%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ + +S + QEK+I +E + ++E ++K+A
Sbjct: 3091 EDKVNTLAKAKVKLEQQADDLES-----------SLQQEKKIRMDLERAKRKLEGDLKLA 3237
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E + L D+ +L LKK +++ ++ + D +L K + + Q +LEE+L
Sbjct: 3238 QESVMDLENDKQQLEERLKKKDFELNTLNARIEDEQAIAAQLQKKLKELQARIEELEEEL 3417
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
R R ++++ L E++ E SER++ +++++ +
Sbjct: 3418 EAERTGRAKVEKLRSELLQELE-------------ETSERLEEAGGATSVQLELNKKREA 3558
Query: 215 VFQNL 219
FQ L
Sbjct: 3559 EFQKL 3573
>emb|Z74105.1|SCYDL057W S.cerevisiae chromosome IV reading frame ORF YDL057w
Length = 5648
Score = 40.0 bits (92), Expect = 0.17
Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 6/147 (4%)
Frame = +3
Query: 65 EEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSS 124
+EK + +K+ ++ ED+ +I E+K A+ +NLE++ Q +
Sbjct: 1098 KEKDKSNVNHQKETKSLKEDIAAKITEIK-----------------AINENLEEMKIQCN 1226
Query: 125 VLMDNMKHLLELNKLIMKSQQESWD-----LEEKLLDIRKKRLQLKQASESKLLEIQTEK 179
L +H+ + + KS+ +S D L EKL + ++ +ES + ++ K
Sbjct: 1227 NLSKEKEHISK-ELVEYKSRFQSHDNLVAKLTEKLKSLANNYKDMQAENESLIKAVEESK 1403
Query: 180 NKQKIDLDSMENS-ERIKIIRQNLQME 205
N+ I L +++N + + ++N Q+E
Sbjct: 1404 NESSIQLSNLQNKIDSMSQEKENFQIE 1484
Score = 39.3 bits (90), Expect = 0.29
Identities = 38/187 (20%), Positives = 88/187 (46%), Gaps = 26/187 (13%)
Frame = +3
Query: 38 DRMTLLLRLRAQTKQQLLEYKSMVDASEEK--TPEQIMQEKQIEAKIEDLENEIEEVKVA 95
++++ L + R + + +L YK++ + E K T E+ ++E +++ E ++E K+
Sbjct: 1659 NKISELTKTREELEAELAAYKNLKNELETKLETSEKALKE------VKENEEHLKEEKI- 1817
Query: 96 FEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMK---------------HLLELNKLI 140
+++K A + + +L+ NLE + ++ L +K + +LN I
Sbjct: 1818 -QLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEISQLNDEI 1994
Query: 141 MKSQQESWDLEEKLLDIRKKRLQLKQASESK---------LLEIQTEKNKQKIDLDSMEN 191
+QQE+ +++K ++ + +K SE + L +Q ++ K+K + +
Sbjct: 1995 TSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASL 2174
Query: 192 SERIKII 198
E IK +
Sbjct: 2175 LESIKSV 2195
Score = 36.2 bits (82), Expect = 2.4
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 46/216 (21%)
Frame = +3
Query: 38 DRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFE 97
+++T L + + +++ +L K +SEE+ K E ++E L+NEI+ AFE
Sbjct: 2385 EKITNLSKAKEKSESELSRLKKT--SSEER--------KNAEEQLEKLKNEIQIKNQAFE 2534
Query: 98 IKKLALD----------------------RMRLSTALK--------KNLEKISRQSSVLM 127
++ L+ R++ LK LEK+S + L+
Sbjct: 2535 KERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDELL 2714
Query: 128 DNMKHLLE-LNKLIMKSQQESWDLEEKLL--------DIRKKRLQLKQASESK------L 172
+ ++ ++ L I+ + + +EKLL D+ + QL+ A ESK L
Sbjct: 2715 EEKQNTIKSLQDEILSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQESKAKVEEGL 2894
Query: 173 LEIQTEKNKQKIDLD-SMENSERIKIIRQNLQMEIK 207
+++ E +K+K +L+ S E ++++ ++ + E+K
Sbjct: 2895 KKLEEESSKEKAELEKSKEMMKKLESTIESNETELK 3002
>gb|S75411.1|S75411 vir regulon: mry15=Mry homolog...scpA15=ScpA15 [Streptococcus
pyogenes, type M15, opacity factor-positive serotype,
Genomic, 5 genes, 5299 nt]
Length = 5299
Score = 40.0 bits (92), Expect = 0.17
Identities = 41/137 (29%), Positives = 66/137 (47%), Gaps = 4/137 (2%)
Frame = +3
Query: 52 QQLLEYKSMVDASEEKTPEQI----MQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMR 107
Q+L E K + DAS E++ + +K++EA + L E +++K +I + R
Sbjct: 2817 QKLKEEKQISDASREESSRDLEASRESKKKVEADLAALTAEHQKLKEEKQISDAS--RQG 2990
Query: 108 LSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQA 167
LS LK+ LE + + L + L L KL K +E L EK K LQ K
Sbjct: 2991 LSVTLKR-LEAKKKVEADLAEANSKLQALEKL-NKELEEGKKLSEK----EKAELQAKLE 3152
Query: 168 SESKLLEIQTEKNKQKI 184
+E+K L+ Q K +++
Sbjct: 3153 AEAKALKEQLAKQAEEL 3203
>dbj|AP003515.1|AP003515 Clostridium perfringens plasmid pCP13 DNA, complete sequence
Length = 54310
Score = 40.0 bits (92), Expect = 0.17
Identities = 43/179 (24%), Positives = 89/179 (49%), Gaps = 6/179 (3%)
Frame = +2
Query: 71 QIMQEKQIEAK-IEDLENEIEE----VKVAFEIKKLALDRMRLSTALKKNLEKISRQSSV 125
Q+ + ++I K I +L+ IE+ + A E L+ + R+ ++ + +S+Q +V
Sbjct: 2276 QVGRYERINNKLIPELKAVIEQGNLTIANASEFSSLSEENQRVILSIIDDKTNMSKQEAV 2455
Query: 126 -LMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKI 184
L + +K + E +L +K E +LE K L+ KK K SE++ L K+K+
Sbjct: 2456 DLKNKLKKIEEEKELELKKAYEEKELELKRLEEEKKNQVSKLKSENENL-------KKKL 2614
Query: 185 DLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQLEKN 243
D +++E R+ ++ +IKI + + +IL ++ D +++I + ++N
Sbjct: 2615 DSNNIEEE------RKEIEGQIKIEFEEKLKNEKVILEEELKSKYDKKIEDITKEAKEN 2773
>gb|U85023.1|GGU85023 Gallus gallus slow myosin heavy chain 2 (SM2) mRNA, partial cds
Length = 2413
Score = 40.0 bits (92), Expect = 0.17
Identities = 42/162 (25%), Positives = 76/162 (45%), Gaps = 3/162 (1%)
Frame = +3
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALD 104
R+ A+ KQ+ E ++ ++AS++++ + + ++ L+N EE +LD
Sbjct: 837 RILAEWKQKYEETQAELEASQKES-------RSLSTELFKLKNAYEE----------SLD 965
Query: 105 RMRLSTALKKNL-EKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQ 163
+ KNL E+I+ + + + K + EL KL + E D++ L +
Sbjct: 966 NLETLKRENKNLQEEIADLTDQISMSGKTIHELEKLKKALENEKSDIQAALEEAEGAL-- 1139
Query: 164 LKQASESKLLEIQTEKNKQKIDLDS--MENSERIKIIRQNLQ 203
+ ESK L IQ E N+ K D+D E E + +R+N Q
Sbjct: 1140--EHEESKSLRIQLELNQIKADVDRKLAEKDEEFENLRRNHQ 1259
Score = 38.1 bits (87), Expect = 0.64
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 5/161 (3%)
Frame = +3
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEV-----KVAFEIK 99
R R +Q+LLE V+ + I Q+K++E I L +E+E+ + K
Sbjct: 1575 RSRKLAEQELLEATERVNLLHSQNTGLINQKKKLETDISQLSSEVEDAVQECRNAEEKAK 1754
Query: 100 KLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
K D ++ LKK + +S ++ MK +E + I Q + E+ L K
Sbjct: 1755 KAITDAAMMAEELKK-----EQDTSAHLERMKKNME--QTIKDLQMRLDEAEQIALKGGK 1913
Query: 160 KRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQ 200
K++Q LE + + + ++D++ + +E K IR+
Sbjct: 1914 KQIQ--------KLEARVRELEGELDMEQKKMAEAQKGIRK 2012
>dbj|AB025262.1|AB025262 Sus scrofa mRNA for myosin heavy chain 2x, complete cds
Length = 5866
Score = 40.0 bits (92), Expect = 0.17
Identities = 40/185 (21%), Positives = 86/185 (45%), Gaps = 2/185 (1%)
Frame = +3
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+A
Sbjct: 3093 EDKVNTLTKAKTKLEQQVDDLEGSLE-----------QEKKLRMDLERAKRKLEGDLKLA 3239
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E + D+ +L LKK ++S S + D ++L K I + Q +LEE+
Sbjct: 3240 QESTMDIENDKQQLDEKLKKKEFEMSNLQSKIEDEQALAMQLQKKIKELQARIEELEEE- 3416
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
++ ++AS +K EK + + + E SER++ +I++ +
Sbjct: 3417 -------IEAERASRAK-----AEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREA 3560
Query: 215 VFQNL 219
FQ +
Sbjct: 3561 EFQKM 3575
>gb|U31463.1|RNU31463 Rattus norvegicus nonmuscle myosin heavy chain-A mRNA, complete cds
Length = 6060
Score = 40.0 bits (92), Expect = 0.17
Identities = 45/196 (22%), Positives = 82/196 (40%), Gaps = 22/196 (11%)
Frame = +1
Query: 39 RMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEI 98
++ L + L+A Q + + + SEEK + + Q +++EA++ED E + + +A
Sbjct: 4684 KLRLEVNLQAMKAQFERDLQGRDEQSEEKKKQLVRQVREMEAELED-ERKQRSIAMAAR- 4857
Query: 99 KKLALDRMRLSTAL---KKNLEKISRQSSVLMDNMKHLL------------------ELN 137
KKL +D L + KN E+ +Q L MK + E
Sbjct: 4858 KKLEMDLKDLEAHIDTANKNREEAIKQLRKLQAQMKDCMRDVDDTRASREEILAQAKENE 5037
Query: 138 KLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSER-IK 196
K + + E L+E+L + + Q +Q + EI K + L+ E I
Sbjct: 5038 KKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEIANSSGKGALALEEKRRLEALIA 5217
Query: 197 IIRQNLQMEIKITTVI 212
++ + L+ E T +I
Sbjct: 5218 LLEEELEEEQGNTELI 5265
Score = 34.3 bits (77), Expect = 9.2
Identities = 43/195 (22%), Positives = 84/195 (43%), Gaps = 36/195 (18%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVK--- 93
E + L+ + Q ++QL + +EE +++++E DLE +EE +
Sbjct: 2632 ETMQSQLMAEKLQLQEQLQAKTELCAEAEELRARLTAKKQELEEICHDLEARVEEEEERC 2811
Query: 94 --VAFEIKKLALDRMRLSTALKKNLEKISRQ----SSVLMDNMKHLLELNKLIMKSQQES 147
+ E KK+ + L L++ E+ +RQ V + LE +++IM+ Q
Sbjct: 2812 QYLQAEKKKMQQNIQELEEQLEE--EESARQKLQLEKVTTEAKLKKLEEDQIIMEDQNCK 2985
Query: 148 WDLEEKLLDIR---------------KKRLQLKQASESKLLEI------------QTEKN 180
E+KLL+ R K +LK E+ + ++ + EK
Sbjct: 2986 LAKEKKLLEDRVAEFTTDLMEEEEKSKSLAKLKNKHEAMITDLEERLRREEKQRQELEKT 3165
Query: 181 KQKIDLDSMENSERI 195
++K++ DS + S++I
Sbjct: 3166 RRKLEGDSTDLSDQI 3210
>ref|NM_013194.1| Rattus norvegicus Myosin, heavy polypeptide 9, non-muscle (Myh9),
mRNA
Length = 6060
Score = 40.0 bits (92), Expect = 0.17
Identities = 45/196 (22%), Positives = 82/196 (40%), Gaps = 22/196 (11%)
Frame = +1
Query: 39 RMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEI 98
++ L + L+A Q + + + SEEK + + Q +++EA++ED E + + +A
Sbjct: 4684 KLRLEVNLQAMKAQFERDLQGRDEQSEEKKKQLVRQVREMEAELED-ERKQRSIAMAAR- 4857
Query: 99 KKLALDRMRLSTAL---KKNLEKISRQSSVLMDNMKHLL------------------ELN 137
KKL +D L + KN E+ +Q L MK + E
Sbjct: 4858 KKLEMDLKDLEAHIDTANKNREEAIKQLRKLQAQMKDCMRDVDDTRASREEILAQAKENE 5037
Query: 138 KLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSER-IK 196
K + + E L+E+L + + Q +Q + EI K + L+ E I
Sbjct: 5038 KKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEIANSSGKGALALEEKRRLEALIA 5217
Query: 197 IIRQNLQMEIKITTVI 212
++ + L+ E T +I
Sbjct: 5218 LLEEELEEEQGNTELI 5265
Score = 34.3 bits (77), Expect = 9.2
Identities = 43/195 (22%), Positives = 84/195 (43%), Gaps = 36/195 (18%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVK--- 93
E + L+ + Q ++QL + +EE +++++E DLE +EE +
Sbjct: 2632 ETMQSQLMAEKLQLQEQLQAKTELCAEAEELRARLTAKKQELEEICHDLEARVEEEEERC 2811
Query: 94 --VAFEIKKLALDRMRLSTALKKNLEKISRQ----SSVLMDNMKHLLELNKLIMKSQQES 147
+ E KK+ + L L++ E+ +RQ V + LE +++IM+ Q
Sbjct: 2812 QYLQAEKKKMQQNIQELEEQLEE--EESARQKLQLEKVTTEAKLKKLEEDQIIMEDQNCK 2985
Query: 148 WDLEEKLLDIR---------------KKRLQLKQASESKLLEI------------QTEKN 180
E+KLL+ R K +LK E+ + ++ + EK
Sbjct: 2986 LAKEKKLLEDRVAEFTTDLMEEEEKSKSLAKLKNKHEAMITDLEERLRREEKQRQELEKT 3165
Query: 181 KQKIDLDSMENSERI 195
++K++ DS + S++I
Sbjct: 3166 RRKLEGDSTDLSDQI 3210
>dbj|AB059399.1|AB059399 Bos taurus MyHC-2x mRNA for myosin heavy chain 2x, complete cds
Length = 5987
Score = 40.0 bits (92), Expect = 0.17
Identities = 40/185 (21%), Positives = 86/185 (45%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+A
Sbjct: 3112 EDKVNTLTKAKTKLEQQVDDLEGSLE-----------QEKKLRMDLERAKRKLEGDLKLA 3258
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E + D+ +L LKK ++S S + D ++L K I + Q +LEE+
Sbjct: 3259 QESTMDIENDKQQLDEKLKKKEFEMSNLQSKIEDEQALAMQLQKKIKELQARIEELEEE- 3435
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
++ ++AS +K EK + + + E SER++ +I++ +
Sbjct: 3436 -------IEAERASRAK-----AEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREA 3579
Query: 215 VFQNL 219
FQ +
Sbjct: 3580 EFQKM 3594
>dbj|AK027638.1|AK027638 Homo sapiens cDNA FLJ14732 fis, clone NT2RP3001969, weakly similar
to TRICHOHYALIN
Length = 2283
Score = 40.0 bits (92), Expect = 0.17
Identities = 39/158 (24%), Positives = 76/158 (47%), Gaps = 5/158 (3%)
Frame = +3
Query: 61 VDASEEKTPEQI-MQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKI 119
V+A + + EQ + +QIE IED +EE++V R +K+ + +
Sbjct: 771 VEALQAQLGEQTKLSREQIEGLIEDRRIHLEEIQV---------QHQRNQNKIKELTKNL 923
Query: 120 SRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLL--DIRKKRLQLKQASE--SKLLEI 175
+L ++ K L+L + +++++SW LE+ L I++ R+Q K+ + K+L +
Sbjct: 924 HHTQELLYESTKDFLQL-RSENQNKEKSWMLEKDNLMSKIKQYRVQCKKKEDKIGKVLPV 1100
Query: 176 QTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQ 213
E + + SE IK ++ L E K++ + Q
Sbjct: 1101MHESHHAQ--------SEYIKSLKDKLVQEKKLSNMYQ 1190
>emb|X54378.1|SCUSO1 S.cerevisiae gene for Uso1 protein, involved in intracellular
protein transport
Length = 5877
Score = 40.0 bits (92), Expect = 0.17
Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 6/147 (4%)
Frame = +3
Query: 65 EEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSS 124
+EK + +K+ ++ ED+ +I E+K A+ +NLE++ Q +
Sbjct: 2838 KEKDKSNVNHQKETKSLKEDIAAKITEIK-----------------AINENLEEMKIQCN 2966
Query: 125 VLMDNMKHLLELNKLIMKSQQESWD-----LEEKLLDIRKKRLQLKQASESKLLEIQTEK 179
L +H+ + + KS+ +S D L EKL + ++ +ES + ++ K
Sbjct: 2967 NLSKEKEHISK-ELVEYKSRFQSHDNLVAKLTEKLKSLANNYKDMQAENESLIKAVEESK 3143
Query: 180 NKQKIDLDSMENS-ERIKIIRQNLQME 205
N+ I L +++N + + ++N Q+E
Sbjct: 3144 NESSIQLSNLQNKIDSMSQEKENFQIE 3224
Score = 39.3 bits (90), Expect = 0.29
Identities = 38/187 (20%), Positives = 88/187 (46%), Gaps = 26/187 (13%)
Frame = +3
Query: 38 DRMTLLLRLRAQTKQQLLEYKSMVDASEEK--TPEQIMQEKQIEAKIEDLENEIEEVKVA 95
++++ L + R + + +L YK++ + E K T E+ ++E +++ E ++E K+
Sbjct: 3399 NKISELTKTREELEAELAAYKNLKNELETKLETSEKALKE------VKENEEHLKEEKI- 3557
Query: 96 FEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMK---------------HLLELNKLI 140
+++K A + + +L+ NLE + ++ L +K + +LN I
Sbjct: 3558 -QLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEISQLNDEI 3734
Query: 141 MKSQQESWDLEEKLLDIRKKRLQLKQASESK---------LLEIQTEKNKQKIDLDSMEN 191
+QQE+ +++K ++ + +K SE + L +Q ++ K+K + +
Sbjct: 3735 TSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASL 3914
Query: 192 SERIKII 198
E IK +
Sbjct: 3915 LESIKSV 3935
Score = 36.2 bits (82), Expect = 2.4
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 46/216 (21%)
Frame = +3
Query: 38 DRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFE 97
+++T L + + +++ +L K +SEE+ K E ++E L+NEI+ AFE
Sbjct: 4125 EKITNLSKAKEKSESELSRLKKT--SSEER--------KNAEEQLEKLKNEIQIKNQAFE 4274
Query: 98 IKKLALD----------------------RMRLSTALK--------KNLEKISRQSSVLM 127
++ L+ R++ LK LEK+S + L+
Sbjct: 4275 KERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDELL 4454
Query: 128 DNMKHLLE-LNKLIMKSQQESWDLEEKLL--------DIRKKRLQLKQASESK------L 172
+ ++ ++ L I+ + + +EKLL D+ + QL+ A ESK L
Sbjct: 4455 EEKQNTIKSLQDEILSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQESKAKVEEGL 4634
Query: 173 LEIQTEKNKQKIDLD-SMENSERIKIIRQNLQMEIK 207
+++ E +K+K +L+ S E ++++ ++ + E+K
Sbjct: 4635 KKLEEESSKEKAELEKSKEMMKKLESTIESNETELK 4742
>emb|Z74106.1|SCYDL058W S.cerevisiae chromosome IV reading frame ORF YDL058w
Length = 6480
Score = 40.0 bits (92), Expect = 0.17
Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 6/147 (4%)
Frame = +1
Query: 65 EEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSS 124
+EK + +K+ ++ ED+ +I E+K A+ +NLE++ Q +
Sbjct: 3373 KEKDKSNVNHQKETKSLKEDIAAKITEIK-----------------AINENLEEMKIQCN 3501
Query: 125 VLMDNMKHLLELNKLIMKSQQESWD-----LEEKLLDIRKKRLQLKQASESKLLEIQTEK 179
L +H+ + + KS+ +S D L EKL + ++ +ES + ++ K
Sbjct: 3502 NLSKEKEHISK-ELVEYKSRFQSHDNLVAKLTEKLKSLANNYKDMQAENESLIKAVEESK 3678
Query: 180 NKQKIDLDSMENS-ERIKIIRQNLQME 205
N+ I L +++N + + ++N Q+E
Sbjct: 3679 NESSIQLSNLQNKIDSMSQEKENFQIE 3759
Score = 39.3 bits (90), Expect = 0.29
Identities = 38/187 (20%), Positives = 88/187 (46%), Gaps = 26/187 (13%)
Frame = +1
Query: 38 DRMTLLLRLRAQTKQQLLEYKSMVDASEEK--TPEQIMQEKQIEAKIEDLENEIEEVKVA 95
++++ L + R + + +L YK++ + E K T E+ ++E +++ E ++E K+
Sbjct: 3934 NKISELTKTREELEAELAAYKNLKNELETKLETSEKALKE------VKENEEHLKEEKI- 4092
Query: 96 FEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMK---------------HLLELNKLI 140
+++K A + + +L+ NLE + ++ L +K + +LN I
Sbjct: 4093 -QLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEISQLNDEI 4269
Query: 141 MKSQQESWDLEEKLLDIRKKRLQLKQASESK---------LLEIQTEKNKQKIDLDSMEN 191
+QQE+ +++K ++ + +K SE + L +Q ++ K+K + +
Sbjct: 4270 TSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASL 4449
Query: 192 SERIKII 198
E IK +
Sbjct: 4450 LESIKSV 4470
Score = 36.2 bits (82), Expect = 2.4
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 46/216 (21%)
Frame = +1
Query: 38 DRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFE 97
+++T L + + +++ +L K +SEE+ K E ++E L+NEI+ AFE
Sbjct: 4660 EKITNLSKAKEKSESELSRLKKT--SSEER--------KNAEEQLEKLKNEIQIKNQAFE 4809
Query: 98 IKKLALD----------------------RMRLSTALK--------KNLEKISRQSSVLM 127
++ L+ R++ LK LEK+S + L+
Sbjct: 4810 KERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDELL 4989
Query: 128 DNMKHLLE-LNKLIMKSQQESWDLEEKLL--------DIRKKRLQLKQASESK------L 172
+ ++ ++ L I+ + + +EKLL D+ + QL+ A ESK L
Sbjct: 4990 EEKQNTIKSLQDEILSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQESKAKVEEGL 5169
Query: 173 LEIQTEKNKQKIDLD-SMENSERIKIIRQNLQMEIK 207
+++ E +K+K +L+ S E ++++ ++ + E+K
Sbjct: 5170 KKLEEESSKEKAELEKSKEMMKKLESTIESNETELK 5277
>ref|NM_111385.1| Arabidopsis thaliana chromosome 3 CHR3v12152001 genomic sequence
Length = 1905
Score = 40.0 bits (92), Expect = 0.17
Identities = 44/188 (23%), Positives = 90/188 (47%), Gaps = 14/188 (7%)
Frame = +1
Query: 72 IMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKN-----LEKISRQSSVL 126
+ ++ E++I L+ E E+ EI+K L ++ L KN E+++R +
Sbjct: 409 VKEKSDRESEIRVLKGEAIELTGKVEIEKEQLRKVCDERDLIKNGFDLQHEEVNRLKECV 588
Query: 127 MDNMKHLLELNKLIMKSQQESWDL-------EEKLLDIRKKRLQLKQASESKLLEIQTEK 179
+ + L +I K + E+ L EE++ ++K+++ L++ E K EI K
Sbjct: 589 VRLEEKESNLEIVIGKLESENERLVKERKVREEEIEGVKKEKIGLEKIMEEKKNEIDGLK 768
Query: 180 NKQKIDLDSMENSERIKIIRQNL--QMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIV 237
+ K+ L E +KI ++ + ++E K+ + + V + E+ L+++V
Sbjct: 769 REIKVLLSEKNEMEIVKIEQKGVIEELERKLDKLNETV--------RSLTKEEKVLRDLV 924
Query: 238 LQLEKNVD 245
+ LEKN+D
Sbjct: 925 IGLEKNLD 948
>gb|J00671.1|RABMYSA Rabbit cardiac alpha-myosin heavy chain (hc) fragment
Length = 363
Score = 40.0 bits (92), Expect = 0.17
Identities = 29/105 (27%), Positives = 57/105 (53%), Gaps = 2/105 (1%)
Frame = +1
Query: 74 QEKQIEAKIEDLENEIE-EVKVAFE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMK 131
QEK++ +E + ++E ++K+ E I L D+++L LKK IS+ +S + D
Sbjct: 13 QEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKLQLEERLKKKEFDISQLNSKIEDEQA 192
Query: 132 HLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQ 176
+L+L K + ++Q +LEE+L R R ++++ E++
Sbjct: 193 LVLQLQKKLKENQARIEELEEELEAERTARAKVEKLRSDLSRELE 327
>ref|NM_032358.1| Homo sapiens hypothetical protein MGC13183 (MGC13183), mRNA
Length = 2299
Score = 40.0 bits (92), Expect = 0.17
Identities = 39/158 (24%), Positives = 76/158 (47%), Gaps = 5/158 (3%)
Frame = +1
Query: 61 VDASEEKTPEQI-MQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKI 119
V+A + + EQ + +QIE IED +EE++V R +K+ + +
Sbjct: 766 VEALQAQLGEQTKLSREQIEGLIEDRRIHLEEIQV---------QHQRNQNKIKELTKNL 918
Query: 120 SRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLL--DIRKKRLQLKQASE--SKLLEI 175
+L ++ K L+L + +++++SW LE+ L I++ R+Q K+ + K+L +
Sbjct: 919 HHTQELLYESTKDFLQL-RSENQNKEKSWMLEKDNLMSKIKQYRVQCKKKEDKIGKVLPV 1095
Query: 176 QTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQ 213
E + + SE IK ++ L E K++ + Q
Sbjct: 1096MHESHHAQ--------SEYIKSLKDKLVQEKKLSNMYQ 1185
>gb|BC006444.1|BC006444 Homo sapiens, Similar to RIKEN cDNA 2700091N06 gene, clone
MGC:13183 IMAGE:3616619, mRNA, complete cds
Length = 2299
Score = 40.0 bits (92), Expect = 0.17
Identities = 39/158 (24%), Positives = 76/158 (47%), Gaps = 5/158 (3%)
Frame = +1
Query: 61 VDASEEKTPEQI-MQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKI 119
V+A + + EQ + +QIE IED +EE++V R +K+ + +
Sbjct: 766 VEALQAQLGEQTKLSREQIEGLIEDRRIHLEEIQV---------QHQRNQNKIKELTKNL 918
Query: 120 SRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLL--DIRKKRLQLKQASE--SKLLEI 175
+L ++ K L+L + +++++SW LE+ L I++ R+Q K+ + K+L +
Sbjct: 919 HHTQELLYESTKDFLQL-RSENQNKEKSWMLEKDNLMSKIKQYRVQCKKKEDKIGKVLPV 1095
Query: 176 QTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQ 213
E + + SE IK ++ L E K++ + Q
Sbjct: 1096MHESHHAQ--------SEYIKSLKDKLVQEKKLSNMYQ 1185
>emb|X67428.1|PSVICJ Pisum sativum vicJ gene
Length = 2837
Score = 40.0 bits (92), Expect = 0.17
Identities = 31/118 (26%), Positives = 59/118 (49%), Gaps = 5/118 (4%)
Frame = +2
Query: 89 IEEVKVAFE-IKKLALDRMRLST----ALKKNLEKISRQSSVLMDNMKHLLELNKLIMKS 143
++ +K +E I+K+ L++ +LK ++I+ ++ ++ + + + EL+K S
Sbjct: 1466 VQNIKTNYEEIEKVLLEQQEQEPQHRRSLKDRRQEINEENVIVKVSREQIEELSKNAKSS 1645
Query: 144 QQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQN 201
++S E ++R + + K EI EKN+Q DLD NS IK + QN
Sbjct: 1646 SKKSVSSESGPFNLRSRN-PIYSNKFGKFFEITPEKNQQLQDLDIFVNSVDIKEV*QN 1816
>ref|NM_030830.1| Rattus norvegicus leucine zipper protein 1 (Luzp1), mRNA
Length = 10929
Score = 39.7 bits (91), Expect = 0.22
Identities = 31/125 (24%), Positives = 62/125 (48%)
Frame = +2
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAF 96
ED ++ L + ++ L+Y V+ E Q + K++DL EIE++K
Sbjct: 3050 EDGISSTLPSKESRRKGSLDYLKQVENETRDKSENEKNRNQEDNKVKDLNQEIEKLKT-- 3223
Query: 97 EIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLD 156
+++ +L++ L+K+ +++ L DN +L ELN K++ + LEE L
Sbjct: 3224 --------QIKHFESLEEELKKMRAKNNDLQDN--YLTELN----KNRSLASQLEEVKLQ 3361
Query: 157 IRKKR 161
++K++
Sbjct: 3362 VKKQK 3376
>gb|AF181259.1|AF181259 Rattus norvegicus putative transcription factor LUZP (Luzp) mRNA,
complete cds
Length = 10929
Score = 39.7 bits (91), Expect = 0.22
Identities = 31/125 (24%), Positives = 62/125 (48%)
Frame = +2
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAF 96
ED ++ L + ++ L+Y V+ E Q + K++DL EIE++K
Sbjct: 3050 EDGISSTLPSKESRRKGSLDYLKQVENETRDKSENEKNRNQEDNKVKDLNQEIEKLKT-- 3223
Query: 97 EIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLD 156
+++ +L++ L+K+ +++ L DN +L ELN K++ + LEE L
Sbjct: 3224 --------QIKHFESLEEELKKMRAKNNDLQDN--YLTELN----KNRSLASQLEEVKLQ 3361
Query: 157 IRKKR 161
++K++
Sbjct: 3362 VKKQK 3376
>gb|AF435011.1|AF435011 Homo sapiens NUANCE (NUA) mRNA, complete cds
Length = 21794
Score = 39.7 bits (91), Expect = 0.22
Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 4/143 (2%)
Frame = +3
Query: 54 LLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALK 113
L + ++ A + + + Q + + ++++ E + + + A +++ L+T LK
Sbjct: 17358 LTDTSHLLSAVKGQERFSLYQTRSLIHELKNKEIHFQRRRTTCALTLEAGEKLLLTTDLK 17537
Query: 114 KNLEKISRQSSVLMDNMKHLL-ELNKLIMKSQQ--ESWDLEEKLLDIRKKRLQ-LKQASE 169
E + R+ S L D+ K + +L ++I + Q E+WD EK + K RLQ LK SE
Sbjct: 17538 TK-ESVGRRISQLQDSWKDMEPQLAEMIKQFQSTVETWDQCEKKIKELKSRLQVLKAQSE 17714
Query: 170 SKLLEIQTEKNKQKIDLDSMENS 192
L E+ + + +K + +E S
Sbjct: 17715 DPLPELHEDLHNEKELIKELEQS 17783
>ref|NM_101194.1| Arabidopsis thaliana chromosome 1 CHR1v12152001 genomic sequence
Length = 3387
Score = 39.7 bits (91), Expect = 0.22
Identities = 43/155 (27%), Positives = 80/155 (50%), Gaps = 6/155 (3%)
Frame = +1
Query: 54 LLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALK 113
LL ++ + A EEK + + +I+ I+D + + + FE++ + R L L+
Sbjct: 1045 LLAKENELRAFEEKLIAR--EGTEIQKLIDDQKEVLGSKMLEFELECEEI-RKSLDKELQ 1215
Query: 114 KNLEKISRQSSVLMDNMKHLLE-----LNKLIMKSQQESWDLEEKLLDIRKKRLQLKQAS 168
+ +E++ RQ V +D+ + LE +NK + ++ DLE KL I K+R ++ QA
Sbjct: 1216 RKIEELERQK-VEIDHSEEKLEKRNQAMNKKFDRVNEKEMDLEAKLKTI-KEREKIIQAE 1389
Query: 169 ESKLLEIQTEKNKQKIDLDSMEN-SERIKIIRQNL 202
E +L EK + D +S+E+ + I+ IR +
Sbjct: 1390 EKRL---SLEKQQLLSDKESLEDLQQEIEKIRAEM 1485
Score = 39.3 bits (90), Expect = 0.29
Identities = 41/193 (21%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Frame = +1
Query: 36 SEDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKV- 94
+E M L +L+ + E + ++ A E++ + Q + +EDL+ EIE+++
Sbjct: 1318 NEKEMDLEAKLKT-----IKEREKIIQAEEKRLSLEKQQLLSDKESLEDLQQEIEKIRAE 1482
Query: 95 -------------AFEIKKLALDR-MRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLI 140
+ EIKK + +RL + LK +EK L +++L K
Sbjct: 1483 MTKKEEMIEEECKSLEIKKEEREEYLRLQSELKSQIEKSRVHEEFLSKEVENL----KQE 1650
Query: 141 MKSQQESWD-LEEKLLDIRKKRLQLKQASES----KLLE-IQTEKNKQKIDLDSMENSER 194
+ ++ W+ L+EK K+R+++ + E +LLE + +K + + + M+ +
Sbjct: 1651 KERFEKEWEILDEKQAVYNKERIRISEEKEKFERFQLLEGERLKKEESALRVQIMQELDD 1830
Query: 195 IKIIRQNLQMEIK 207
I++ R++ + ++
Sbjct: 1831 IRLQRESFEANME 1869
>ref|NM_080325.1| Drosophila melanogaster lava lamp (lva), mRNA
Length = 8673
Score = 39.7 bits (91), Expect = 0.22
Identities = 36/142 (25%), Positives = 71/142 (49%), Gaps = 7/142 (4%)
Frame = +1
Query: 44 LRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEI----K 99
LR Q +Q ++ S D + E+ + ++ +IE+L E + K+ FEI +
Sbjct: 6823 LRQSCQGQQLSVDMASRNDEQMAQLQEKESEIVHLKQRIEELMREDQTEKLVFEILTKNQ 7002
Query: 100 KLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
+L L RM++ L+++ E ++ D+ + + +L L + QQE D+EE+L +
Sbjct: 7003 ELQLLRMQVKQ-LEEDKEDQQVSAAPPKDDGETVEKLKSLCQQLQQEKSDMEEELRVLNN 7179
Query: 160 ---KRLQLKQASESKLLEIQTE 178
L+L+ + LL++ T+
Sbjct: 7180 HVLSSLELEDRMKQTLLQLDTK 7245
>emb|X64346.1|HSGEND Herpesvirus saimiri complete genome DNA
Length = 112930
Score = 39.7 bits (91), Expect = 0.22
Identities = 33/137 (24%), Positives = 72/137 (52%)
Frame = -2
Query: 47 RAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRM 106
+ + K+Q L+ K + +K + +++K K++ L+ ++++ K+ ++KK
Sbjct: 106875 KKKLKKQKLKKKKLKKKKLKKKKLKKLKKK----KLKKLKKKLKKKKLKKKLKKKLKKLK 106708
Query: 107 RLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQ 166
+L LKK L+K+ + +K L +L K + K L++KL ++KK +LK+
Sbjct: 106707 KLKKKLKKKLKKLKK--------LKKLKKLKKKLKK-------LKKKLKKLKKKLKKLKK 106573
Query: 167 ASESKLLEIQTEKNKQK 183
+ K L+ + +K K++
Sbjct: 106572 LKKLKKLKKKLKKLKKR 106522
>dbj|AB071050.1|AB071050 Macaca fascicularis testis cDNA clone:QtsA-13791, full insert
sequence
Length = 1815
Score = 39.7 bits (91), Expect = 0.22
Identities = 40/197 (20%), Positives = 93/197 (46%), Gaps = 29/197 (14%)
Frame = +3
Query: 46 LRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEE-VKVAFEIKKLALD 104
++ + +Q L + + EKT + +Q AKI+ L+N ++E V++ ++ +L +
Sbjct: 1212 MKDKERQPFLVKQGSIIFENEKTSKVNSVTEQCVAKIQYLQNYLKESVQIQKKVTELENE 1391
Query: 105 RMRLSTALK-----------------KNLEKISRQSSVLM--------DNMKHLLELNKL 139
+ L + +K K L+ + + S + D+ + L EL K+
Sbjct: 1392 NLNLKSKMKPLIFTTQSLIQKVETYEKQLKNLVEEKSTIQSKLSKTEEDSKECLKELKKI 1571
Query: 140 IMK---SQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIK 196
I K Q ++ LEEK + + ++ Q+ +A + +++++++K + D+ + N +
Sbjct: 1572 IGKYNVLQGQNKTLEEKNIQLSLEKQQMMEAFD----QLKSKEHKTQSDMAIVNNENNL- 1736
Query: 197 IIRQNLQMEIKITTVIQ 213
+++ME T ++Q
Sbjct: 1737 ---MSIEMEAMKTNILQ 1778
>ref|NM_103688.1| Arabidopsis thaliana chromosome 1 CHR1v12152001 genomic sequence
Length = 3165
Score = 39.7 bits (91), Expect = 0.22
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Frame = +1
Query: 51 KQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFE--IKKLALDRMRL 108
++Q+ +++ +DA +EK E E+Q++ ED+E+ E++ VA E + K AL +
Sbjct: 250 EEQVKDFEEQIDAYDEKVHE---YEEQVQKLNEDVEDLNEKLSVANEEIVTKEALVKQHS 420
Query: 109 STA--LKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQ 166
A EK ++ L + ++ + L+KL ++ + L+ L + ++ LK+
Sbjct: 421 KVAEDAVSGWEKADAEALALKNTLES-VTLSKL--TAEDRAAHLDGALKECMRQIRNLKK 591
Query: 167 ASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNL 202
E KL ++ K KQ I+ +ME +R+ Q L
Sbjct: 592 DHEVKLHDVALSKTKQ-IEKMTMEFEKRMCDYEQEL 696
>gb|AE003429.2|AE003429 Drosophila melanogaster genomic scaffold 142000013386054 section 13 of
35, complete sequence
Length = 299620
Score = 39.7 bits (91), Expect = 0.22
Identities = 36/142 (25%), Positives = 71/142 (49%), Gaps = 7/142 (4%)
Frame = -3
Query: 44 LRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEI----K 99
LR Q +Q ++ S D + E+ + ++ +IE+L E + K+ FEI +
Sbjct: 163730 LRQSCQGQQLSVDMASRNDEQMAQLQEKESEIVHLKQRIEELMREDQTEKLVFEILTKNQ 163551
Query: 100 KLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
+L L RM++ L+++ E ++ D+ + + +L L + QQE D+EE+L +
Sbjct: 163550 ELQLLRMQVKQ-LEEDKEDQQVSAAPPKDDGETVEKLKSLCQQLQQEKSDMEEELRVLNN 163374
Query: 160 ---KRLQLKQASESKLLEIQTE 178
L+L+ + LL++ T+
Sbjct: 163373 HVLSSLELEDRMKQTLLQLDTK 163308
>gb|M86409.1|HSV3PRGEN Herpesvirus saimiri the most three prime end of the genome
Length = 43658
Score = 39.7 bits (91), Expect = 0.22
Identities = 33/137 (24%), Positives = 72/137 (52%)
Frame = -1
Query: 47 RAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRM 106
+ + K+Q L+ K + +K + +++K K++ L+ ++++ K+ ++KK
Sbjct: 37568 KKKLKKQKLKKKKLKKKKLKKKKLKKLKKK----KLKKLKKKLKKKKLKKKLKKKLKKLK 37401
Query: 107 RLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQ 166
+L LKK L+K+ + +K L +L K + K L++KL ++KK +LK+
Sbjct: 37400 KLKKKLKKKLKKLKK--------LKKLKKLKKKLKK-------LKKKLKKLKKKLKKLKK 37266
Query: 167 ASESKLLEIQTEKNKQK 183
+ K L+ + +K K++
Sbjct: 37265 LKKLKKLKKKLKKLKKR 37215
>ref|NM_075971.1| Caenorhabditis elegans
Length = 5802
Score = 39.7 bits (91), Expect = 0.22
Identities = 45/177 (25%), Positives = 82/177 (45%), Gaps = 6/177 (3%)
Frame = +1
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALD 104
+L+ + K+ Y SM++ +++K E I Q + +A +E + V+++ + L +
Sbjct: 679 KLKLKLKEVKNNYASMLEKNKKKGEEFIKQSENSKAVVE------KTVQISTVLDSLQKE 840
Query: 105 RMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQL 164
R LS KKN +KI S L++ E++ L M +++ L+E L D+ ++ L
Sbjct: 841 REDLSEIRKKNEQKIEGLSQELIEAYG---EIDALKMNNEK----LQEHLGDLEQRVGHL 999
Query: 165 KQASESKLLEIQTEKNKQKIDLDSMEN------SERIKIIRQNLQMEIKITTVIQHV 215
K + + L D+D+ EN SER NL +E + QH+
Sbjct: 1000KIQPDYESLPPLNIPRLDMTDIDNDENGTLHEFSER----NDNLNVEHMNSDCDQHI 1158
>gb|L49344.1|L49344 Mus musculus leucine zipper protein 1 (Luzp1) mRNA, complete cds
Length = 7380
Score = 39.7 bits (91), Expect = 0.22
Identities = 31/125 (24%), Positives = 62/125 (48%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAF 96
ED ++ L + ++ L+Y V+ E Q + K++DL EIE++K
Sbjct: 988 EDGISSTLSSKESKRKGSLDYLKQVENETRDKSENEKNRNQEDNKVKDLNQEIEKLKT-- 1161
Query: 97 EIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLD 156
+++ +L++ L+K+ +++ L DN +L ELN +++ + LEE L
Sbjct: 1162 --------QIKHFESLEEELKKMRAKNNDLQDN--YLTELN----RNRSLASQLEEIKLQ 1299
Query: 157 IRKKR 161
+RK++
Sbjct: 1300 VRKQK 1314
>ref|NM_002473.1| Homo sapiens myosin, heavy polypeptide 9, non-muscle (MYH9), mRNA
Length = 5883
Score = 39.7 bits (91), Expect = 0.22
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 22/196 (11%)
Frame = +1
Query: 39 RMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEI 98
++ L + L+A Q + + + SEEK + + Q +++EA++ED E + + VA
Sbjct: 4663 KLRLEVNLQAMKAQFERDLQGRDEQSEEKKKQLVRQVREMEAELED-ERKQRSMAVAAR- 4836
Query: 99 KKLALDRMRLST---ALKKNLEKISRQSSVLMDNMKHLL------------------ELN 137
KKL +D L + KN ++ +Q L MK + E
Sbjct: 4837 KKLEMDLKDLEAHIDSANKNRDEAIKQLRKLQAQMKDCMRELDDTRASREEILAQAKENE 5016
Query: 138 KLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSE-RIK 196
K + + E L+E+L + + Q +Q + EI K + L+ E RI
Sbjct: 5017 KKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEIANSSGKGALALEEKRRLEARIA 5196
Query: 197 IIRQNLQMEIKITTVI 212
+ + L+ E T +I
Sbjct: 5197 QLEEELEEEQGNTELI 5244
Score = 37.7 bits (86), Expect = 0.83
Identities = 38/182 (20%), Positives = 81/182 (43%), Gaps = 3/182 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEI-EEVKVA 95
ED+ L + + + ++ E+ + + EEK+ + + EA I DLE + E K
Sbjct: 2950 EDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSKSLAKLKNKHEAMITDLEERLRREEKQR 3129
Query: 96 FEIKKLALDRMRLSTALKKNLEKISRQSSVL-MDNMKHLLELNKLIMKSQQESWDLEEKL 154
E++K ST L + ++ Q + L M K EL + + ++E+ L
Sbjct: 3130 QELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAAQKNMAL 3309
Query: 155 LDIRKKRLQLKQASESKLLEIQTEK-NKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQ 213
IR+ Q+ + E ++++E+ ++ K + + E ++ ++ L+ + T Q
Sbjct: 3310 KKIRELESQISELQE----DLESERASRNKAEKQKRDLGEELEALKTELEDTLDSTAAQQ 3477
Query: 214 HV 215
+
Sbjct: 3478 EL 3483
Score = 34.7 bits (78), Expect = 7.0
Identities = 38/189 (20%), Positives = 89/189 (46%), Gaps = 17/189 (8%)
Frame = +1
Query: 36 SEDRMTLLLRLRAQTKQQLLEYKSMVDA-------SEEKTPEQIMQEKQIEAKIEDLENE 88
+E+R+T + L++Q + L+ + + A +EE +++++E DLE
Sbjct: 2590 AENRLTEMETLQSQLMAEKLQLQEQLQAETELCAEAEELRARLTAKKQELEEICHDLEAR 2769
Query: 89 IEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESW 148
+EE + + L ++ ++ +++ E++ + S + L+L K+ +++ +
Sbjct: 2770 VEEEEE--RCQHLQAEKKKMQQNIQELEEQLEEEESA-----RQKLQLEKVTTEAKLKKL 2928
Query: 149 DLEEKLLDIRKKRLQLKQASESKLLEIQ--------TEKNKQKIDLDSMENSERIKI--I 198
+ E+ +L+ + +L A E KLLE + TE+ ++ L ++N I +
Sbjct: 2929 EEEQIILEDQNCKL----AKEKKLLEDRIAEFTTNLTEEEEKSKSLAKLKNKHEAMITDL 3096
Query: 199 RQNLQMEIK 207
+ L+ E K
Sbjct: 3097 EERLRREEK 3123
>gb|AC012358.9| Homo sapiens BAC clone RP11-321E13 from 2, complete sequence
Length = 162151
Score = 39.7 bits (91), Expect = 0.22
Identities = 57/224 (25%), Positives = 108/224 (47%), Gaps = 27/224 (12%)
Frame = -3
Query: 47 RAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEA-------------KIEDLENEIEEVK 93
+ Q K++L YK + +EE E EK+ E KIE LE E E++
Sbjct: 139400 KRQIKKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEALEQENSELE 139221
Query: 94 VAFEIKKLALDRMRLSTALKKNLEK----ISRQSSVLMDNMKHLLELNKLIMKSQQESWD 149
K LD + T ++LEK + ++ L N++ L + + + Q E+ +
Sbjct: 139220 RENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKMAQLQLENKE 139041
Query: 150 LEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLD------SMENS-ERIKIIRQNL 202
LE + + KK L+L +AS K + E + Q +D++ ++ENS ++I+ + L
Sbjct: 139040 LESEKEQL-KKGLELLKASFKKTERL--EVSYQGLDIENQRLQKTLENSNKKIQQLESEL 138870
Query: 203 Q-MEIKITTVIQHVFQNLILGSKVNW--AEDPALKEIVLQLEKN 243
Q +E++ T+ +++ + I ++ E+ +L++ QLEK+
Sbjct: 138869 QDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKD 138738
>emb|AL035475.6|PFMAL4P2 Plasmodium falciparum MAL4P2, complete sequence
Length = 234112
Score = 39.7 bits (91), Expect = 0.22
Identities = 35/158 (22%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Frame = -2
Query: 57 YKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKL--ALDRMRLSTALKK 114
YKSM + ++ + IE +ENE+E+ K+ EI + ++M+ +
Sbjct: 765 YKSMFAYGKIAQMRNNLEIMKCRISIEQIENELEKKKIQREIMFIEEQKEKMKEEKIFIE 586
Query: 115 NLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLE 174
+K + + +D + +LI+ +Q + + +K + K L+ K+ +
Sbjct: 585 EEKKKIKDQKIYIDEENKKMNTERLIIDLEQINHEQTKKNITNEKMELE-KEIKNFSNEK 409
Query: 175 IQTEKNKQKIDLDSMENSERIKIIR-QNLQMEIKITTV 211
I EK KQ I D + + I+ IR + + +E +I +
Sbjct: 408 ITIEKEKQNISNDKITLEKEIQNIRNEKMTLEKEIQNI 295
>gb|M31013.1|HUMMYONM Human nonmuscle myosin heavy chain (NMHC) mRNA, 3' end
Length = 5122
Score = 39.7 bits (91), Expect = 0.22
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 22/196 (11%)
Frame = +2
Query: 39 RMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEI 98
++ L + L+A Q + + + SEEK + + Q +++EA++ED E + + VA
Sbjct: 2525 KLRLEVNLQAMKAQFERDLQGRDEQSEEKKKQLVRQVREMEAELED-ERKQRSMAVAAR- 2698
Query: 99 KKLALDRMRLST---ALKKNLEKISRQSSVLMDNMKHLL------------------ELN 137
KKL +D L + KN ++ +Q L MK + E
Sbjct: 2699 KKLEMDLKDLEAHIDSANKNRDEAIKQLRKLQAQMKDCMRELDDTRASREEILAQAKENE 2878
Query: 138 KLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSE-RIK 196
K + + E L+E+L + + Q +Q + EI K + L+ E RI
Sbjct: 2879 KKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEIANSSGKGALALEEKRRLEARIA 3058
Query: 197 IIRQNLQMEIKITTVI 212
+ + L+ E T +I
Sbjct: 3059 QLEEELEEEQGNTELI 3106
Score = 37.7 bits (86), Expect = 0.83
Identities = 38/182 (20%), Positives = 81/182 (43%), Gaps = 3/182 (1%)
Frame = +2
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEI-EEVKVA 95
ED+ L + + + ++ E+ + + EEK+ + + EA I DLE + E K
Sbjct: 809 EDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSKSLAKLKNKHEAMITDLEERLRREEKQR 988
Query: 96 FEIKKLALDRMRLSTALKKNLEKISRQSSVL-MDNMKHLLELNKLIMKSQQESWDLEEKL 154
E++K ST L + ++ Q + L M K EL + + ++E+ L
Sbjct: 989 QELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAAQKNMAL 1168
Query: 155 LDIRKKRLQLKQASESKLLEIQTEK-NKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQ 213
IR+ Q+ + E ++++E+ ++ K + + E ++ ++ L+ + T Q
Sbjct: 1169KKIRELESQISELQE----DLESERASRNKAEKQKRDLGEELEALKTELEDTLDSTAAQQ 1336
Query: 214 HV 215
+
Sbjct: 1337EL 1342
Score = 35.0 bits (79), Expect = 5.4
Identities = 36/181 (19%), Positives = 84/181 (45%), Gaps = 10/181 (5%)
Frame = +2
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAF 96
E + L+ + Q ++QL + +EE +++++E DLE +EE + +
Sbjct: 473 ETLQSQLMAEKLQLQEQLQAETELCAEAEELRARLTAKKQELEEICHDLEARVEEEEERY 652
Query: 97 EIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLD 156
+ L ++ ++ +++ E++ + S + L+L K+ +++ + + E+ +L+
Sbjct: 653 Q--HLQAEKKKMQQNIQELEEQLEEEESA-----RQKLQLEKVTTEAKLKKLEEEQIILE 811
Query: 157 IRKKRLQLKQASESKLLEIQ--------TEKNKQKIDLDSMENSERIKI--IRQNLQMEI 206
+ +L A E KLLE + TE+ ++ L ++N I + + L+ E
Sbjct: 812 DQNCKL----AKEKKLLEDRIAEFTTNLTEEEEKSKSLAKLKNKHEAMITDLEERLRREE 979
Query: 207 K 207
K
Sbjct: 980 K 982
>gb|S76368.1|S76368 ORF 5' of ECLF2...ECRF3=G protein-coupled receptor homolog
[herpesvirus saimiri HVS, host-squirrel monkey, Genomic,
4 genes, 3720 nt]
Length = 3720
Score = 39.7 bits (91), Expect = 0.22
Identities = 33/137 (24%), Positives = 72/137 (52%)
Frame = -1
Query: 47 RAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRM 106
+ + K+Q L+ K + +K + +++K K++ L+ ++++ K+ ++KK
Sbjct: 1869 KKKLKKQKLKKKKLKKKKLKKKKLKKLKKK----KLKKLKKKLKKKKLKKKLKKKLKKLK 1702
Query: 107 RLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQ 166
+L LKK L+K+ + +K L +L K + K L++KL ++KK +LK+
Sbjct: 1701 KLKKKLKKKLKKLKK--------LKKLKKLKKKLKK-------LKKKLKKLKKKLKKLKK 1567
Query: 167 ASESKLLEIQTEKNKQK 183
+ K L+ + +K K++
Sbjct: 1566 LKKLKKLKKKLKKLKKR 1516
>dbj|AK074055.1| Homo sapiens mRNA for FLJ00126 protein
Length = 5261
Score = 39.7 bits (91), Expect = 0.22
Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 4/143 (2%)
Frame = +2
Query: 54 LLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALK 113
L + ++ A + + + Q + + ++++ E + + + A +++ L+T LK
Sbjct: 1010 LTDTSHLLSAVKGQERFSLYQTRSLIHELKNKEIHFQRRRTTCALTLEAGEKLLLTTDLK 1189
Query: 114 KNLEKISRQSSVLMDNMKHLL-ELNKLIMKSQQ--ESWDLEEKLLDIRKKRLQ-LKQASE 169
E + R+ S L D+ K + +L ++I + Q E+WD EK + K RLQ LK SE
Sbjct: 1190 TK-ESVGRRISQLQDSWKDMEPQLAEMIKQFQSTVETWDQCEKKIKELKSRLQVLKAQSE 1366
Query: 170 SKLLEIQTEKNKQKIDLDSMENS 192
L E+ + + +K + +E S
Sbjct: 1367 DPLPELHEDLHNEKELIKELEQS 1435
>gb|AF150755.1|AF150755 Mus musculus microtubule-actin crosslinking factor (Macf) mRNA,
complete cds
Length = 17333
Score = 39.7 bits (91), Expect = 0.22
Identities = 34/149 (22%), Positives = 64/149 (42%)
Frame = +1
Query: 53 QLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTAL 112
Q L +S + E +Q+ + +I + + L+NEI+E + + L + L L
Sbjct: 8092 QRLSGQSAISTQPEAVKQQLEETSEIRSDLGQLDNEIKEAQTLCQELSLLIGEQYLKDEL 8271
Query: 113 KKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKL 172
KK LE + L D + + + S Q+ +++ D + L KQ+ ++K
Sbjct: 8272 KKRLETVVLPLQGLEDLAADRMSRLQAALASTQQF----QQMFDELRTWLDEKQSQQAKN 8439
Query: 173 LEIQTEKNKQKIDLDSMENSERIKIIRQN 201
I + + + L EN E K + Q+
Sbjct: 8440 CPISAKLERLQCQL--QENEEFQKNLNQH 8520
>gb|BC006075.1|BC006075 Mus musculus, Similar to Myosin, heavy polypeptide 9, non-muscle,
clone IMAGE:3593519, mRNA, partial cds
Length = 1953
Score = 39.7 bits (91), Expect = 0.22
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 22/196 (11%)
Frame = +1
Query: 39 RMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEI 98
++ L + L+A Q + + + SEEK + + Q +++EA++ED E + + +A
Sbjct: 370 KLRLEVNLQAMKAQFERDLQGRDEQSEEKKKQLVRQVREMEAELED-ERKQRSMAMAAR- 543
Query: 99 KKLALDRMRLSTAL---KKNLEKISRQSSVLMDNMKHLL------------------ELN 137
KKL +D L + KN E+ +Q L MK + E
Sbjct: 544 KKLEMDLKDLEAHIDTANKNREEAIKQLRKLQAQMKDCMRELDDTRASREEILAQAKENE 723
Query: 138 KLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSE-RIK 196
K + + E L+E+L + + Q +Q + EI K + L+ E RI
Sbjct: 724 KKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEIANSSGKGALALEEKRRLEARIA 903
Query: 197 IIRQNLQMEIKITTVI 212
+ + L+ E T +I
Sbjct: 904 QLEEELEEEQGNTELI 951
>gb|AF068647.1|AF068647 Streptococcus pneumoniae strain E134 pspC gene, partial cds
Length = 2372
Score = 39.7 bits (91), Expect = 0.22
Identities = 36/175 (20%), Positives = 77/175 (43%), Gaps = 16/175 (9%)
Frame = +1
Query: 49 QTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLEN---------EIEEVKVAFEIK 99
Q K+ L+ + V +E+K E ++K + K ED N E+E + ++K
Sbjct: 1309 QFKKDTLKPEKKVAEAEKKVEEA--KKKAKDQKEEDRRNYPTNTYKTLELEIAESDVKVK 1482
Query: 100 KLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
K L+ ++ +N EKI + + L K+ ++ + + K + K
Sbjct: 1483 KAELELVKEEANESRNEEKIKQAKEKVESKKAEATRLEKIKTDRKKAEEEAKRKAEESEK 1662
Query: 160 KRLQLKQ-------ASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIK 207
K + KQ A E+K+ E++ E + + +L ++ S+ +++ L+ ++
Sbjct: 1663 KAAEAKQKVDAEEYALEAKIAELEYEVQRLEKELKEIDESDSEDYLKEGLRAPLQ 1827
>gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 sequence, complete sequence
Length = 99758
Score = 39.3 bits (90), Expect = 0.29
Identities = 41/193 (21%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Frame = +1
Query: 36 SEDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKV- 94
+E M L +L+ + E + ++ A E++ + Q + +EDL+ EIE+++
Sbjct: 90475 NEKEMDLEAKLKT-----IKEREKIIQAEEKRLSLEKQQLLSDKESLEDLQQEIEKIRAE 90639
Query: 95 -------------AFEIKKLALDR-MRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLI 140
+ EIKK + +RL + LK +EK L +++L K
Sbjct: 90640 MTKKEEMIEEECKSLEIKKEEREEYLRLQSELKSQIEKSRVHEEFLSKEVENL----KQE 90807
Query: 141 MKSQQESWD-LEEKLLDIRKKRLQLKQASES----KLLE-IQTEKNKQKIDLDSMENSER 194
+ ++ W+ L+EK K+R+++ + E +LLE + +K + + + M+ +
Sbjct: 90808 KERFEKEWEILDEKQAVYNKERIRISEEKEKFERFQLLEGERLKKEESALRVQIMQELDD 90987
Query: 195 IKIIRQNLQMEIK 207
I++ R++ + ++
Sbjct: 90988 IRLQRESFEANME 91026
Score = 38.9 bits (89), Expect = 0.37
Identities = 37/134 (27%), Positives = 70/134 (51%), Gaps = 6/134 (4%)
Frame = +1
Query: 75 EKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLL 134
+ +I+ I+D + + + FE++ + R L L++ +E++ RQ V +D+ + L
Sbjct: 90259 QTEIQKLIDDQKEVLGSKMLEFELECEEI-RKSLDKELQRKIEELERQK-VEIDHSEEKL 90432
Query: 135 E-----LNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSM 189
E +NK + ++ DLE KL I K+R ++ QA E +L EK + D +S+
Sbjct: 90433 EKRNQAMNKKFDRVNEKEMDLEAKLKTI-KEREKIIQAEEKRL---SLEKQQLLSDKESL 90600
Query: 190 EN-SERIKIIRQNL 202
E+ + I+ IR +
Sbjct: 90601 EDLQQEIEKIRAEM 90642
>dbj|AB070100.1|AB070100 Macaca fascicularis testis cDNA clone:QtsA-13715, full insert
sequence
Length = 2874
Score = 39.3 bits (90), Expect = 0.29
Identities = 50/229 (21%), Positives = 101/229 (43%), Gaps = 39/229 (17%)
Frame = +3
Query: 46 LRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEE-VKVAFEIKKLALD 104
++ + +Q L + + EKT + +Q AKI+ L+N ++E V++ ++ +L +
Sbjct: 1212 MKDKERQPFLVKQGSIIFENEKTSKVNSVTEQCVAKIQYLQNYLKESVQIQKKVTELENE 1391
Query: 105 RMRLSTALK-----------------KNLEKISRQSSVLM--------DNMKHLLELNKL 139
+ L + +K K L+ + + S + D+ + L EL K+
Sbjct: 1392 NLNLKSKMKPLIFTTQSLIQKVETYEKQLKNLVEEKSTIQSKLSKTEEDSKECLKELKKI 1571
Query: 140 IMK---SQQESWDLEEKLLDIRKKRLQLKQA----------SESKLLEIQTEKNKQKIDL 186
I K Q ++ LEEK + + ++ Q+ +A ++S + + E N I++
Sbjct: 1572 IGKYNVLQGQNKTLEEKNIQLSLEKQQMMEAFDQLKSKEHKTQSDMAIVNNENNLMSIEM 1751
Query: 187 DSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKE 235
++M+ + I +I+ +M K T + +L K N E LKE
Sbjct: 1752 EAMKTN--ILLIQDEKEMLEKKTHQLLKEKSSLENELKENQLEVMQLKE 1892
>ref|NM_117062.1| Arabidopsis thaliana chromosome 4 CHR4v12152001 genomic sequence
Length = 1185
Score = 39.3 bits (90), Expect = 0.29
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 18/175 (10%)
Frame = +1
Query: 47 RAQTKQQLLEYKS----------MVDASEE----KTPEQIMQEKQIEAKIEDLENEIEEV 92
+A+ Q+LL Y M D S E +T QI Q++ +E K E+ ++
Sbjct: 658 KAKQVQELLNYVEEIARLNGKSYMADLSHEIRENETAFQIKQQEILEMKGLYTRQEMLQM 837
Query: 93 KV----AFEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESW 148
K +FE ++L R+ T L++ E++ +Q L + LEL K + ++ S
Sbjct: 838 KKDMEKSFENQQLRQMMERVETELRETKERLEQQ---LKEEKSARLELEKRAKEVEKRSS 1008
Query: 149 DLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQ 203
D+ ++L D + KRL+ SES+ E + N +L+ + RIK + +LQ
Sbjct: 1009DVVKELNDEQAKRLE----SESRAKEAVKQSNGVVENLN--KELARIKQMATDLQ 1155
>gb|AY061759.1| Homo sapiens nesprin-2 gamma mRNA, complete cds
Length = 11115
Score = 39.3 bits (90), Expect = 0.29
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Frame = +1
Query: 72 IMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMK 131
+ Q + + ++++ E + + + A +++ L+T LK E + R+ S L D+ K
Sbjct: 6733 LYQTRSLIHELKNKEIHFQRRRTTCALTLEAGEKLLLTTDLKTK-ESVGRRISQLQDSWK 6909
Query: 132 HLL-ELNKLIMKSQQ--ESWDLEEKLLDIRKKRLQ-LKQASESKLLEIQTEKNKQKIDLD 187
+ +L ++I + Q E+WD EK + K RLQ LK SE L E+ + + +K +
Sbjct: 6910 DMEPQLAEMIKQFQSTVETWDQCEKKIKELKSRLQVLKAQSEDPLPELHEDLHNEKELIK 7089
Query: 188 SMENS 192
+E S
Sbjct: 7090 ELEQS 7104
>dbj|AB033763.2|AB033763 Staphylococcus aureus DNA, type-I staphylococccal cassette chromosome
mec, strain:NCTC10442
Length = 39332
Score = 39.3 bits (90), Expect = 0.29
Identities = 42/197 (21%), Positives = 92/197 (46%), Gaps = 20/197 (10%)
Frame = -2
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIM--QEKQIEAKIEDLENEI-EEVKVAFEIKKL 101
+L+ QTKQQ + + + ++++ Q + Q KQ + K + L+ + ++ K ++KK
Sbjct: 15358 KLKKQTKQQQKKRQKLKKQTKQQKKHQKLKKQTKQQQKKRQQLKKQAKQQQKKRQKLKKQ 15179
Query: 102 ALDRMRLSTALKKNLEKISRQSSVLMDN----MKHLLELNKLIMKSQQESWDLEEKLLDI 157
A + + LKK ++ ++ L K +L K + Q++ L+++
Sbjct: 15178 AKQQQKKRQKLKKQKKQQQKKHQKLKKQTK*KQKKRQKLKKQAKQQQKKHQKLKKQTK*K 14999
Query: 158 RKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENS---------ERIKIIRQNL----QM 204
+KKR QLK+ ++ + + Q K + + + + + +KI +NL Q
Sbjct: 14998 QKKRQQLKKQTKQQQKKHQQLKTQMLRAIQMLNHQKLRELKL*IQLLKIYIKNLKLQKQK 14819
Query: 205 EIKITTVIQHVFQNLIL 221
++K+ Q +FQ ++
Sbjct: 14818 KLKLKKYYQKIFQTYLM 14768
>gb|M58163.1|SUS2B2AA S.purpuratus open reading frame
Length = 3356
Score = 39.3 bits (90), Expect = 0.29
Identities = 41/180 (22%), Positives = 85/180 (46%), Gaps = 15/180 (8%)
Frame = +3
Query: 44 LRLRAQTKQQLLEYKS--MVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKL 101
L L+AQ Q + E + + A + + + EKQ+E ++E E+EEV E +L
Sbjct: 825 LELKAQKDQHMFEEEKGQLSTALQSEKKQVCFLEKQLEELGNEMEEEMEEVTGLDERLQL 1004
Query: 102 ALDRM----RLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDI 157
D + ++ L+ L+++ + +M ++K + E ++ + + ++ + L+I
Sbjct: 1005QEDEICSIRAINDQLQTKLDEMREEKDQVMASLKSVEEAREMDKHNHAKDKEILCEELNI 1184
Query: 158 RKKRLQLKQASESKLLEIQ-TEKNKQKIDLDSMEN--------SERIKIIRQNLQMEIKI 208
K+R+ LE+Q TE + +L ++EN +E IK+ + L +K+
Sbjct: 1185EKERVD--------ALEVQLTELSNDFEELSNIENRLAKQEGTAEDIKMDKDRLSSMLKL 1340
>gb|AF115379.2|AF115379 Staphylococcus aureus surface protein Pls (pls) gene, complete cds
Length = 5602
Score = 39.3 bits (90), Expect = 0.29
Identities = 42/197 (21%), Positives = 92/197 (46%), Gaps = 20/197 (10%)
Frame = +2
Query: 45 RLRAQTKQQLLEYKSMVDASEEKTPEQIM--QEKQIEAKIEDLENEI-EEVKVAFEIKKL 101
+L+ QTKQQ + + + ++++ Q + Q KQ + K + L+ + ++ K ++KK
Sbjct: 884 KLKKQTKQQQKKRQKLKKQTKQQKKHQKLKKQTKQQQKKRQQLKKQAKQQQKKRQKLKKQ 1063
Query: 102 ALDRMRLSTALKKNLEKISRQSSVLMDN----MKHLLELNKLIMKSQQESWDLEEKLLDI 157
A + + LKK ++ ++ L K +L K + Q++ L+++
Sbjct: 1064 AKQQQKKRQKLKKQKKQQQKKHQKLKKQTK*KQKKRQKLKKQAKQQQKKHQKLKKQTK*K 1243
Query: 158 RKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENS---------ERIKIIRQNL----QM 204
+KKR QLK+ ++ + + Q K + + + + + +KI +NL Q
Sbjct: 1244 QKKRQQLKKQTKQQQKKHQQLKTQMLRAIQMLNHQKLRELKL*IQLLKIYIKNLKLQKQK 1423
Query: 205 EIKITTVIQHVFQNLIL 221
++K+ Q +FQ ++
Sbjct: 1424 KLKLKKYYQKIFQTYLM 1474
>gb|AE000769.1|AE000769 Aquifex aeolicus section 101 of 109 of the complete genome
Length = 12563
Score = 39.3 bits (90), Expect = 0.29
Identities = 36/140 (25%), Positives = 66/140 (46%), Gaps = 6/140 (4%)
Frame = +1
Query: 65 EEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQ-- 122
EEK E I++E E K E + EIEE K E K+ + + +K+ LEK ++
Sbjct: 772 EEKKEEVIVEEVVEEKKPEVIVEEIEEKKEEEEKKEEEKPKKSVEELIKEILEKKEKEKE 951
Query: 123 -SSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNK 181
V + + + + ++ + ++E E+K + K ++ K+ + LE EK K
Sbjct: 952 KKKVEKERKEEKVRVVEVKKEERKEEKKEEKKEEEKPKIKMSKKEREIMRKLEHAVEKEK 1131
Query: 182 ---QKIDLDSMENSERIKII 198
+K + + + E +KII
Sbjct: 1132KKQEKREKEKKKKEEEVKII 1191
>emb|Y16350.1|OCNEBMRNA Oryctolagus cuniculus mRNA for nebulin
Length = 3493
Score = 39.3 bits (90), Expect = 0.29
Identities = 50/250 (20%), Positives = 99/250 (39%), Gaps = 22/250 (8%)
Frame = +1
Query: 3 EQPQMQDADEPADSGGEXXXXXXXXXXXXXXXCSEDRMTLLLRLRAQTKQQLLEYKSMVD 62
++P ++ A + A E R + + +A ++Y+ D
Sbjct: 715 DRPDIKKATQAAKQASEVEYRAKYRKEGSHGLSMLGRPDIEMAKKAARLSSQVKYRENFD 894
Query: 63 ASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKL---------------ALDRMR 107
+ KTP+ ++ Q+ ++D N EVK ++KKL L+ +
Sbjct: 895 KEKGKTPKYNPKDSQLYKTMKDANNLASEVKYKADLKKLHKPVTDMKESLIMHHVLNTSQ 1074
Query: 108 LSTA--LKKNLEKISRQSSVLMDNMKHL-----LELNKLIMKSQQESWDLEEKLLDIRKK 160
L+++ KKN EK + DN++ L EL ++ ++ + E+ +LD
Sbjct: 1075LASSYQYKKNYEKSKGHYHTIPDNLEQLHLKEATELQSIVKYKEKYEKEREKPMLDFETP 1254
Query: 161 RLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLI 220
+ S+ ++Q+ K +K E E IK +NL +++T + HV
Sbjct: 1255TYITAKESQ----QMQSGKEYRK------EYEESIK--GRNL-TGLEVTPALLHVKYATK 1395
Query: 221 LGSKVNWAED 230
+ S+ + D
Sbjct: 1396IASEKEYRRD 1425
>ref|NM_070023.1| Caenorhabditis elegans
Length = 2472
Score = 38.9 bits (89), Expect = 0.37
Identities = 31/140 (22%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Frame = +1
Query: 52 QQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTA 111
+Q+ E + + E++ +++++ ++ +ED N EE++ E+ ++ DR+R+ A
Sbjct: 724 EQIAERRRVEQQQEDRERQEMLEVERQRRVLEDRRNSEEEIRKQAELDRVEKDRLRMEQA 903
Query: 112 LKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESW------DLEEKLL--DIRKKRLQ 163
+EK +++ + + K + + +E +LE+K+L DI R
Sbjct: 904 AAA-MEKARKEA-----ELAKRARIYKHVFRGAEEEGGTEQLEELEQKILGVDIETGRRL 1065
Query: 164 LKQASESKLLEIQTEKNKQK 183
LK+ SE + + Q E +K
Sbjct: 1066LKEVSEVEWHKKQDEAEIRK 1125
>ref|NM_004986.1| Homo sapiens kinectin 1 (kinesin receptor) (KTN1), mRNA
Length = 4457
Score = 38.9 bits (89), Expect = 0.37
Identities = 33/140 (23%), Positives = 73/140 (51%), Gaps = 2/140 (1%)
Frame = +3
Query: 47 RAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLEN-EIEEVKVAFEIKKLALDR 105
+ ++ ++LLE + + A++EKT + + QE I+A E++ N ++E+ + K+
Sbjct: 2508 KIKSVEELLEAELLKVANKEKTVQDLKQE--IKALKEEIGNVQLEKAQQLSITSKV---- 2669
Query: 106 MRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRL-QL 164
L LK E+++ +VL + K L K + Q+E+ L+ + ++ + L +
Sbjct: 2670 QELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEA 2849
Query: 165 KQASESKLLEIQTEKNKQKI 184
AS+ + LEI ++ + ++
Sbjct: 2850 SSASQFEELEIVLKEKENEL 2909
>dbj|D13629.1|HUMRSC1300 Human mRNA for KIAA0004 gene, complete cds
Length = 4457
Score = 38.9 bits (89), Expect = 0.37
Identities = 33/140 (23%), Positives = 73/140 (51%), Gaps = 2/140 (1%)
Frame = +3
Query: 47 RAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLEN-EIEEVKVAFEIKKLALDR 105
+ ++ ++LLE + + A++EKT + + QE I+A E++ N ++E+ + K+
Sbjct: 2508 KIKSVEELLEAELLKVANKEKTVQDLKQE--IKALKEEIGNVQLEKAQQLSITSKV---- 2669
Query: 106 MRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRL-QL 164
L LK E+++ +VL + K L K + Q+E+ L+ + ++ + L +
Sbjct: 2670 QELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEA 2849
Query: 165 KQASESKLLEIQTEKNKQKI 184
AS+ + LEI ++ + ++
Sbjct: 2850 SSASQFEELEIVLKEKENEL 2909
>gb|BC008538.1|BC008538 Mus musculus, Similar to myosin, heavy polypeptide 2, skeletal
muscle, adult, clone MGC:7639 IMAGE:3495412, mRNA,
complete cds
Length = 5595
Score = 38.9 bits (89), Expect = 0.37
Identities = 40/185 (21%), Positives = 87/185 (46%), Gaps = 2/185 (1%)
Frame = +2
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K+A
Sbjct: 3125 EDKVNTLTKAKIKLEQQVDDLEGSLE-----------QEKKLRMDLERAKRKLEGDLKLA 3271
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I + ++ +L LKK ++S S + D ++L K I + Q +LEE+
Sbjct: 3272 QESIMDIENEKQQLDERLKKKEFEMSNLQSKIEDEQAIGIQLQKKIKELQARIEELEEE- 3448
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
++ ++AS +K EK + + + E SER++ +I++ +
Sbjct: 3449 -------IEAERASRAK-----AEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREA 3592
Query: 215 VFQNL 219
FQ +
Sbjct: 3593 EFQKM 3607
>emb|AJ248286.1|CNSPAX04 Pyrococcus abyssi complete genome; segment 4/6
Length = 288440
Score = 38.9 bits (89), Expect = 0.37
Identities = 40/179 (22%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Frame = +2
Query: 48 AQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMR 107
++ K Q+ + K EEK + ++ +AKI +LE ++++ E +K
Sbjct: 269846 SELKIQVEKLKGRKKGLEEKIVQIERSIEEKKAKISELEEIVKDIPKLQEKEKEYRKLKG 270025
Query: 108 LSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLK-- 165
+ L ++ ++ S +K + E+ K K ++ + ++ EKL +I K+ +LK
Sbjct: 270026 FRDEYESKLRRLEKELSKWESELKAIEEVIKEGEKKKERAEEIREKLSEIEKRLEELKPY 270205
Query: 166 --QASESKLLEIQTEKNKQKI----DLDSMENSERIKIIRQNLQMEIK-ITTVIQHVFQ 217
+ ++K ++ Q E+ K ++ + +E E ++ R ++ IK ITT I + Q
Sbjct: 270206 VEELEDAKQVQKQIERLKARLKGLSPGEVIEKLESLEKERTEIEEAIKEITTRIGQMEQ 270382
Score = 35.4 bits (80), Expect = 4.1
Identities = 34/138 (24%), Positives = 74/138 (52%), Gaps = 8/138 (5%)
Frame = +2
Query: 49 QTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRM-R 107
+ K +L + K+ +D + E + + ++ EAK++DLE++ E + +E K+ L ++ R
Sbjct: 270962 ELKNKLEKEKTELDQAFEMLADVENEIEEKEAKLKDLESKFNEEE--YEEKRERLVKLER 271135
Query: 108 LSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEE---KLLDIRKK---- 160
++L LE++ + + ++ L E + K++ E LE+ K+ D+RKK
Sbjct: 271136 EVSSLTARLEELKKSVEQIKATLRKLKEEKEEREKAKLEIKKLEKALSKVEDLRKKIKDY 271315
Query: 161 RLQLKQASESKLLEIQTE 178
+ K+ + +++ EI +E
Sbjct: 271316 KTLAKEQALNRISEIASE 271369
>ref|XM_007337.7| Homo sapiens kinectin 1 (kinesin receptor) (KTN1), mRNA
Length = 4627
Score = 38.9 bits (89), Expect = 0.37
Identities = 33/140 (23%), Positives = 73/140 (51%), Gaps = 2/140 (1%)
Frame = +3
Query: 47 RAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLEN-EIEEVKVAFEIKKLALDR 105
+ ++ ++LLE + + A++EKT + + QE I+A E++ N ++E+ + K+
Sbjct: 2505 KIKSVEELLEAELLKVANKEKTVQDLKQE--IKALKEEIGNVQLEKAQQLSITSKV---- 2666
Query: 106 MRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRL-QL 164
L LK E+++ +VL + K L K + Q+E+ L+ + ++ + L +
Sbjct: 2667 QELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEA 2846
Query: 165 KQASESKLLEIQTEKNKQKI 184
AS+ + LEI ++ + ++
Sbjct: 2847 SSASQFEELEIVLKEKENEL 2906
>ref|XM_011069.3| Homo sapiens similar to golgi autoantigen, golgin subfamily a, 4 (H.
sapiens) (LOC152440), mRNA
Length = 4113
Score = 38.9 bits (89), Expect = 0.37
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 39/155 (25%)
Frame = +3
Query: 46 LRAQTKQQLLEYKSMVDASE---EKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLA 102
L+ +Q+ +E+K +V + E E+ + K+ E KI LEN++ +K E KK
Sbjct: 1362 LKNYNQQKDIEHKELVQKLQHFQELGEEKDNRVKEAEEKILTLENQVYSMKAELETKKKE 1541
Query: 103 LDRMRLST--------ALKKNLE----------------KISRQSSVLMDNMK------- 131
L+ + LS AL+ LE KI+ L+ M+
Sbjct: 1542 LEHVNLSVKSKEEELKALEDRLESESAAKLAELKRKAEQKIAAIKKQLLSQMEEKEEQYK 1721
Query: 132 -----HLLELNKLIMKSQQESWDLEEKLLDIRKKR 161
HL ELN + + ++E LEEKL + +
Sbjct: 1722 KGTESHLSELNTKLQEREREVHILEEKLKSVESSQ 1826
>gb|AF056936.1|AF056936 Plasmodium falciparum mature parasite-infected erythrocyte surface
antigen gene, complete cds
Length = 5420
Score = 38.9 bits (89), Expect = 0.37
Identities = 43/220 (19%), Positives = 103/220 (46%), Gaps = 13/220 (5%)
Frame = +2
Query: 36 SEDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTP-------EQIMQEKQIEAKIEDLENE 88
++D++T +++ K+ E K V K ++IM+E E + + E
Sbjct: 2660 NKDKVTKQEKVKEVKKEVKKEVKKRVKKRNNKNERKDNVIGKEIMKEDVNEKDTANKDKE 2839
Query: 89 IEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESW 148
IE+ K E+K+ + ++ +K+ E ++ + +K E+ + + +E
Sbjct: 2840 IEQEKEKEEVKE--KEEVKEKEEVKEKEEVKEKEEVKEKEEVKEKEEVKE--KEEVKEKE 3007
Query: 149 DLEEKLLDIRKKRL-QLKQASESKLLEIQTEKNK-----QKIDLDSMENSERIKIIRQNL 202
+++EK + + K + Q K+ E K ++ + +NK Q+I ++ ++ + ++ ++N
Sbjct: 3008 EVKEKDTESKDKEIEQEKEKEEVKEVKEKDTENKDKVIGQEIIIEEIKKEVKKRVKKRNN 3187
Query: 203 QMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQLEK 242
+ E K ++Q + ++ +D A K+ V++ EK
Sbjct: 3188 KNENKDNVIVQEIMNEML-------RKDTANKDKVIEQEK 3286
>emb|X51593.1|HSBMHCE Human MHC mRNA for embryonic myosin heavy chain clone gtMHC-E
Length = 3378
Score = 38.9 bits (89), Expect = 0.37
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + +++ +QQ+ + +S ++ QEK++ +E + ++E ++K+A
Sbjct: 478 EDKVNSLNKTKSKLEQQVEDLESSLE-----------QEKKLRVDLERNKRKLEGDLKLA 624
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+ +L LKK + + S + D L+ K I + Q +LEE++
Sbjct: 625 QESILDLENDKQQLDERLKKKDFEYCQLQSKVEDEQTLGLQFQKKIKELQARIEELEEEI 804
Query: 155 LDIRKKRLQL-KQASE--------SKLLEIQTEKNKQKIDLDSMENSERIKIIRQ----N 201
R R + KQ S+ S+ LE +I+L+ +E +K+ R
Sbjct: 805 EAERATRAKTEKQRSDYARELEELSERLEEAGGVTSTQIELNKKREAEFLKLRRDLEEAT 984
Query: 202 LQMEIKITTV 211
LQ E + T+
Sbjct: 985 LQHEAMVATL 1014
Score = 35.8 bits (81), Expect = 3.2
Identities = 41/161 (25%), Positives = 78/161 (47%), Gaps = 15/161 (9%)
Frame = +1
Query: 53 QLLEYKSMVDASEEKTPEQIMQEKQ-----IEAKIEDLENEIEEVKVAFEIKK-----LA 102
+L + KS +D + E+I Q K+ +E L+ E+ A +KK L
Sbjct: 2128 ELTQVKSEIDRKIAEKDEEIEQLKRNYQRTVETMQSALDAEVRRANEAIRLKKKMEGDLN 2307
Query: 103 LDRMRLSTALKKNLEKISRQSSV---LMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
++LS A ++ E + SV L D HL + ++ Q+ DL+E+L I +
Sbjct: 2308 EIEIQLSHANRQAAETLKHLRSVQGQLKDTQLHLDDA----LRGQE---DLKEQLA-IVE 2463
Query: 160 KRLQLKQASESKLLEI--QTEKNKQKIDLDSMENSERIKII 198
+R L QA +L QTE+ ++ + + ++++ER++++
Sbjct: 2464 RRANLLQAEVEELRATLEQTERARKLAEQELLDSNERVQLL 2586
>gb|L25616.1|HUMCG1X Homo sapiens kinectin mRNA, complete cds
Length = 4416
Score = 38.9 bits (89), Expect = 0.37
Identities = 33/140 (23%), Positives = 73/140 (51%), Gaps = 2/140 (1%)
Frame = +2
Query: 47 RAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLEN-EIEEVKVAFEIKKLALDR 105
+ ++ ++LLE + + A++EKT + + QE I+A E++ N ++E+ + K+
Sbjct: 2465 KIKSVEELLEAELLKVANKEKTVQDLKQE--IKALKEEIGNVQLEKAQQLSITSKV---- 2626
Query: 106 MRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRL-QL 164
L LK E+++ +VL + K L K + Q+E+ L+ + ++ + L +
Sbjct: 2627 QELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEA 2806
Query: 165 KQASESKLLEIQTEKNKQKI 184
AS+ + LEI ++ + ++
Sbjct: 2807 SSASQFEELEIVLKEKENEL 2866
>emb|Z71266.1|CER06C7 Caenorhabditis elegans cosmid R06C7, complete sequence
Length = 30911
Score = 38.9 bits (89), Expect = 0.37
Identities = 41/207 (19%), Positives = 94/207 (44%), Gaps = 32/207 (15%)
Frame = -1
Query: 37 EDRMTLLLRLRAQTK---QQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVK 93
ED L RL Q+K Q+++E + ++ + + +++ ++++L ++E
Sbjct: 30179 EDEQALANRLTRQSKENAQRIIEIEDELEHERQSRSKADRARAELQRELDELNERLDEQN 30000
Query: 94 VAFEIK------------KLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLE-LNKLI 140
EI+ K D + A + + I R+++ + + + L+ L K
Sbjct: 29999 KQLEIQQDNNKKKDSEIIKFRRDLDEKNMANEDQMAMIRRKNNDQISALTNTLDALQKSK 29820
Query: 141 MKSQQESWDLEEKLLDI-----RKKRLQLKQASESKLLEIQTEKNKQKIDLDSME----- 190
K ++E L+++L DI ++ + +++Q +K EIQ + +QK+D S +
Sbjct: 29819 AKIEKEKGVLQKELDDINAQVDQETKSRVEQERLAKQYEIQVAELQQKVDEQSRQIGEYT 29640
Query: 191 ------NSERIKIIRQNLQMEIKITTV 211
+++ + RQ ++EI + T+
Sbjct: 29639 STKGRLSNDNSDLARQVEELEIHLATI 29559
>emb|X15696.1|HSSMHCE Human muscle mRNA for embryonic myosin heavy chain (SMHCE)
Length = 3382
Score = 38.9 bits (89), Expect = 0.37
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + +++ +QQ+ + +S ++ QEK++ +E + ++E ++K+A
Sbjct: 478 EDKVNSLNKTKSKLEQQVEDLESSLE-----------QEKKLRVDLERNKRKLEGDLKLA 624
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+ +L LKK + + S + D L+ K I + Q +LEE++
Sbjct: 625 QESILDLENDKQQLDERLKKKDFEYCQLQSKVEDEQTLGLQFQKKIKELQARIEELEEEI 804
Query: 155 LDIRKKRLQL-KQASE--------SKLLEIQTEKNKQKIDLDSMENSERIKIIRQ----N 201
R R + KQ S+ S+ LE +I+L+ +E +K+ R
Sbjct: 805 EAERATRAKTEKQRSDYARELEELSERLEEAGGVTSTQIELNKKREAEFLKLRRDLEEAT 984
Query: 202 LQMEIKITTV 211
LQ E + T+
Sbjct: 985 LQHEAMVATL 1014
Score = 34.7 bits (78), Expect = 7.0
Identities = 41/161 (25%), Positives = 78/161 (47%), Gaps = 15/161 (9%)
Frame = +1
Query: 53 QLLEYKSMVDASEEKTPEQIMQEKQ-----IEAKIEDLENEIEEVKVAFEIKK-----LA 102
+L + KS +D + E+I Q K+ +E L+ E+ A +KK L
Sbjct: 2128 ELTQVKSEIDRKIAEKDEEIEQLKRNYQRTVETMQSALDAEVRSRNEAIRLKKKMEGDLN 2307
Query: 103 LDRMRLSTALKKNLEKISRQSSV---LMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
++LS A ++ E + SV L D HL + ++ Q+ DL+E+L I +
Sbjct: 2308 EIEIQLSHANRQAAETLKHLRSVQGQLKDTQLHLDDA----LRGQE---DLKEQLA-IVE 2463
Query: 160 KRLQLKQASESKLLEI--QTEKNKQKIDLDSMENSERIKII 198
+R L QA +L QTE+ ++ + + ++++ER++++
Sbjct: 2464 RRANLLQAEVEELRATLEQTERARKLAEQELLDSNERVQLL 2586
>emb|Z71501.1|SCYNL225C S.cerevisiae chromosome XIV reading frame ORF YNL225c
Length = 2146
Score = 38.9 bits (89), Expect = 0.37
Identities = 41/165 (24%), Positives = 80/165 (47%), Gaps = 9/165 (5%)
Frame = -3
Query: 58 KSMVDASEEKTPEQIMQE-KQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNL 116
K + AS+++ +I Q K +A+ EDL NE+E K+ EI+ + R + +T + N
Sbjct: 911 KGFLCASQQEELSRISQRFKNAKAEAEDLRNELENKKI--EIQTM---REKNNTLIGTN- 750
Query: 117 EKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIR-------KKRLQLKQASE 169
+ +S+Q+ +L D L K I+K E ++ + L+ R K++ + +
Sbjct: 749 KTLSKQNKILCDKFDKLTIDEKEILKGCNEEIKIKLERLNERLGSWEKSKEKYETSLKDK 570
Query: 170 SKLL-EIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQ 213
K+L + + + N +LD++ + R + N I I ++Q
Sbjct: 569 EKMLADAEKKTNTLSKELDNLRS--RFGNLEGNTSERITIKNILQ 441
>gb|S47577.1|S47577 moesin homolog [mice, teratocarcinoma F9 cells, mRNA, 3835 nt]
Length = 3835
Score = 38.9 bits (89), Expect = 0.37
Identities = 42/185 (22%), Positives = 90/185 (47%), Gaps = 20/185 (10%)
Frame = +2
Query: 51 KQQLLEYKSM-VDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIK-KLALDRMRL 108
K +E + M A EEK +KQ+E + LENE ++ ++A + K K+ ++ L
Sbjct: 1058 KPDTIEVQQMKAQAREEK------HQKQMERAL--LENEKKKRELAEKEKEKIEREKEEL 1213
Query: 109 STALKKNLEKISRQSSVLMDNMKHLLELN----------KLIMKSQQESWDLEEKLLDIR 158
LK+ E+ + L + + LEL + + K +QE+ + +E LL
Sbjct: 1214 MEKLKQIEEQTKKAQQELEEQTRRALELEQERKRAQSEAEKLAKERQEAEEAKEALLQAS 1393
Query: 159 KKRLQLKQASESKLLEI-----QTEKNKQKIDLDSMENSERIKIIRQNLQ---MEIKITT 210
+ + + ++ S++ E+ Q E ++K + +++E ++ ++++++L+ E+K
Sbjct: 1394 RDQKKTQEQLASEMAELTARISQLEMARKKKESEAVEWQQKAQMVQEDLEKTRAELKTAM 1573
Query: 211 VIQHV 215
HV
Sbjct: 1574 STPHV 1588
>gb|AF136711.1|AF136711 Amoeba proteus myosin heavy chain mRNA, complete cds
Length = 6499
Score = 38.9 bits (89), Expect = 0.37
Identities = 41/173 (23%), Positives = 87/173 (49%), Gaps = 17/173 (9%)
Frame = +3
Query: 51 KQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIE----DLENEIEEVKVAFEIKKL---AL 103
+ L +++S VD ++ +K++E+++E L+NE E KVA E K+ L
Sbjct: 4029 EDNLEDHQSQVDEVQDDVNVLSAAKKKLESELEALKRSLDNEAEGRKVAEEKMKVLDTEL 4208
Query: 104 DRMRL--------STALKKNLEKISRQSSVLMDNMKHL-LELNKLIMKSQQESWDLEEKL 154
++L +T L +N++K+ + L + ++ EL+KL +++ +L+E
Sbjct: 4209 HELQLALSNAENKNTGLVRNVKKVQDEVEDLNEQYENASKELSKLDKGNKKTEAELKELR 4388
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSME-NSERIKIIRQNLQMEI 206
+++ + L A E KL Q E ++ L+ +E S ++ ++ LQ+++
Sbjct: 4389 RHVQESQSSL-DAGELKLRHTQDELDELHHQLEDLEAKSSSLERSKKQLQLQV 4544
>emb|Z69381.1|SCCXIV39K S.cerevisiae 38,855 bp segment of chromosome XIV
Length = 38855
Score = 38.9 bits (89), Expect = 0.37
Identities = 41/165 (24%), Positives = 80/165 (47%), Gaps = 9/165 (5%)
Frame = -3
Query: 58 KSMVDASEEKTPEQIMQE-KQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNL 116
K + AS+++ +I Q K +A+ EDL NE+E K+ EI+ + R + +T + N
Sbjct: 33054 KGFLCASQQEELSRISQRFKNAKAEAEDLRNELENKKI--EIQTM---REKNNTLIGTN- 32893
Query: 117 EKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIR-------KKRLQLKQASE 169
+ +S+Q+ +L D L K I+K E ++ + L+ R K++ + +
Sbjct: 32892 KTLSKQNKILCDKFDKLTIDEKEILKGCNEEIKIKLERLNERLGSWEKSKEKYETSLKDK 32713
Query: 170 SKLL-EIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQ 213
K+L + + + N +LD++ + R + N I I ++Q
Sbjct: 32712 EKMLADAEKKTNTLSKELDNLRS--RFGNLEGNTSERITIKNILQ 32584
>emb|X13100.1|HSEMYHC Human mRNA fragment for myosin heavy chain
Length = 3623
Score = 38.9 bits (89), Expect = 0.37
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + +++ +QQ+ + +S ++ QEK++ +E + ++E ++K+A
Sbjct: 724 EDKVNSLNKTKSKLEQQVEDLESSLE-----------QEKKLRVDLERNKRKLEGDLKLA 870
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+ +L LKK + + S + D L+ K I + Q +LEE++
Sbjct: 871 QESILDLENDKQQLDERLKKKDFEYCQLQSKVEDEQTLGLQFQKKIKELQARIEELEEEI 1050
Query: 155 LDIRKKRLQL-KQASE--------SKLLEIQTEKNKQKIDLDSMENSERIKIIRQ----N 201
R R + KQ S+ S+ LE +I+L+ +E +K+ R
Sbjct: 1051EAERATRAKTEKQRSDYARELEELSERLEEAGGVTSTQIELNKKREAEFLKLRRDLEEAT 1230
Query: 202 LQMEIKITTV 211
LQ E + T+
Sbjct: 1231LQHEAMVATL 1260
Score = 35.4 bits (80), Expect = 4.1
Identities = 37/149 (24%), Positives = 74/149 (48%), Gaps = 25/149 (16%)
Frame = +1
Query: 75 EKQIEAKIEDLENEIEEVKVAF----EIKKLALDR--------MRLSTALKKNLEKISRQ 122
+ +I+ KI + + EIE++K + E + ALD +RL ++ +L +I Q
Sbjct: 2389 KSEIDRKIAEKDEEIEQLKRNYQRTVETMQSALDAEVRSRNEAIRLKKKMEGDLNEIEIQ 2568
Query: 123 SS----VLMDNMKHLLELNKLIMKSQ-------QESWDLEEKLLDIRKKRLQLKQASESK 171
S + +KHL + + +Q Q DL+E+L I ++R L QA +
Sbjct: 2569 LSHANRQAAETLKHLRSVQGQLKDTQLHLDDALQTQEDLKEQLA-IVERRANLLQAEVEE 2745
Query: 172 LLEI--QTEKNKQKIDLDSMENSERIKII 198
L QTE+ ++ + + ++++ER++++
Sbjct: 2746 LRATLEQTERARKLAEQELLDSNERVQLL 2832
>gb|L49472.1|MUSFA2E17 Mus musculus troponin T fast skeletal muscle isoform FA6e17 (Tnnt3)
mRNA, complete cds
Length = 1028
Score = 38.9 bits (89), Expect = 0.37
Identities = 36/147 (24%), Positives = 68/147 (45%)
Frame = +2
Query: 48 AQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMR 107
+QT+ Q+ +M D E+ EQ +E++ + EEV+ E+++ R +
Sbjct: 47 SQTQLQIQPTATMSDEETEQVEEQYEEEEEAQE---------EEVQEEEEVQEEEKPRPK 199
Query: 108 LSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQA 167
L+ EK+ K L+EL LI S E+ EE+ L K+R++ ++A
Sbjct: 200 LTAPKIPEGEKVDFDDIQKKRQNKDLMELQALI-DSHFEARKKEEEELIALKERIEKRRA 376
Query: 168 SESKLLEIQTEKNKQKIDLDSMENSER 194
++ I+ EK ++ + + E + R
Sbjct: 377 ERAEQQRIRAEKEREPQNRLAEEKARR 457
>dbj|AB055276.1|AB055276 Macaca fascicularis brain cDNA, clone:QflA-11332
Length = 2166
Score = 38.9 bits (89), Expect = 0.37
Identities = 51/237 (21%), Positives = 106/237 (44%), Gaps = 32/237 (13%)
Frame = +2
Query: 39 RMTLLLRLRAQTKQQLLE-YKSMVDASEEK----------------TPEQIMQEKQIEA- 80
R+T + RL+AQ LE +K V+ + EK T + ++EKQ +
Sbjct: 890 RVTEVQRLQAQQADAALEEFKRQVELNSEKVYAEMKEQMEKVEADLTRSKSLREKQSKEF 1069
Query: 81 --KIEDL----ENEIEEVKVAFEIKKLAL------DRMRLSTALKKNLEKISRQSSVLMD 128
++ED+ E +I E+K+ E +K L ++ L ++ +E + +Q
Sbjct: 1070 LWQLEDIRQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLVRDHEREIENLEKQLRAA-- 1243
Query: 129 NMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLE--IQTEKNKQKIDL 186
NM+H ++ + + Q D+E ++ +R++ + + + +L+E + E+ KQ+
Sbjct: 1244 NMEHEDQIQEFKKRDAQVIADMEAQVQKLREELINVNSQRKQQLVELGLLREEEKQRATR 1423
Query: 187 DSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQLEKN 243
+ ++K + +++E+K T H + + K N KE +L K+
Sbjct: 1424 EHEIVVNKLKAESEKMKIELKKT----HAAETEMTLEKANSRLKQIEKEYTQKLAKS 1582
>ref|NM_002470.1| Homo sapiens myosin, heavy polypeptide 3, skeletal muscle, embryonic
(MYH3), mRNA
Length = 6032
Score = 38.9 bits (89), Expect = 0.37
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + +++ +QQ+ + +S ++ QEK++ +E + ++E ++K+A
Sbjct: 3127 EDKVNSLNKTKSKLEQQVEDLESSLE-----------QEKKLRVDLERNKRKLEGDLKLA 3273
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+ +L LKK + + S + D L+ K I + Q +LEE++
Sbjct: 3274 QESILDLENDKQQLDERLKKKDFEYCQLQSKVEDEQTLGLQFQKKIKELQARIEELEEEI 3453
Query: 155 LDIRKKRLQL-KQASE--------SKLLEIQTEKNKQKIDLDSMENSERIKIIRQ----N 201
R R + KQ S+ S+ LE +I+L+ +E +K+ R
Sbjct: 3454 EAERATRAKTEKQRSDYARELEELSERLEEAGGVTSTQIELNKKREAEFLKLRRDLEEAT 3633
Query: 202 LQMEIKITTV 211
LQ E + T+
Sbjct: 3634 LQHEAMVATL 3663
Score = 34.7 bits (78), Expect = 7.0
Identities = 41/161 (25%), Positives = 78/161 (47%), Gaps = 15/161 (9%)
Frame = +1
Query: 53 QLLEYKSMVDASEEKTPEQIMQEKQ-----IEAKIEDLENEIEEVKVAFEIKK-----LA 102
+L + KS +D + E+I Q K+ +E L+ E+ A +KK L
Sbjct: 4777 ELTQVKSEIDRKIAEKDEEIEQLKRNYQRTVETMQSALDAEVRSRNEAIRLKKKMEGDLN 4956
Query: 103 LDRMRLSTALKKNLEKISRQSSV---LMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
++LS A ++ E + SV L D HL + ++ Q+ DL+E+L I +
Sbjct: 4957 EIEIQLSHANRQAAETLKHLRSVQGQLKDTQLHLDDA----LRGQE---DLKEQLA-IVE 5112
Query: 160 KRLQLKQASESKLLEI--QTEKNKQKIDLDSMENSERIKII 198
+R L QA +L QTE+ ++ + + ++++ER++++
Sbjct: 5113 RRANLLQAEVEELRATLEQTERARKLAEQELLDSNERVQLL 5235
>emb|AJ312240.1|BPS312240 Bacteriophage PSA of Listeria monocytogenes ScottA, complete genome
Length = 37618
Score = 38.9 bits (89), Expect = 0.37
Identities = 34/128 (26%), Positives = 67/128 (51%), Gaps = 1/128 (0%)
Frame = +3
Query: 56 EYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKN 115
+Y+ +++ +E+ PE + + +E+ ++LE + E V AF IK+L S L+K
Sbjct: 29178 KYQQLLNLAEQLDPELL--KDTLESIDDELETKAENV--AFVIKELEGQ----SLILEKE 29333
Query: 116 LEKISRQSSVLMDNMKHLLE-LNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLE 174
++++ + + + +N+K L + L ++ + ++ LDIRK L ESKLL
Sbjct: 29334 TKRLAERKNTINNNVKRLKQSLFDAMITANKQKIKTNLFTLDIRKNPPSLIVEDESKLLN 29513
Query: 175 IQTEKNKQ 182
E+ K+
Sbjct: 29514 YLIEQPKK 29537
>gb|U22019.1|MHU22019 Mycoplasma hominis PG21 P120 (p120) gene, complete cds
Length = 3505
Score = 38.9 bits (89), Expect = 0.37
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 1/188 (0%)
Frame = +1
Query: 51 KQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLST 110
K QL ++ + +SE K + + K ++EN I+E K + ALD
Sbjct: 574 KDQLSSLETKLLSSESKFKNSGKKIESYLKKSTEIENNIKESKTKLVELRKALD------ 735
Query: 111 ALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASES 170
L KNLE + +Q+S D K+ N++ K + +I+ K L++KQ E
Sbjct: 736 DLNKNLETLEKQNS---DGTKN----NEISSKKE-----------EIKAKNLEIKQ-EEE 858
Query: 171 KLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEI-KITTVIQHVFQNLILGSKVNWAE 229
K +QTE QK + N + L++E+ +TT +++ + + K A
Sbjct: 859 KFEGLQTELKTQKDKIIEETNK------KSKLEIEVANLTTKKENISKEIEANQKELDAL 1020
Query: 230 DPALKEIV 237
D +IV
Sbjct: 1021DKEYDDIV 1044
>emb|X13988.1|HSMYHC Human mRNA for embryonic myosin heavy chain
Length = 6032
Score = 38.9 bits (89), Expect = 0.37
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + +++ +QQ+ + +S ++ QEK++ +E + ++E ++K+A
Sbjct: 3127 EDKVNSLNKTKSKLEQQVEDLESSLE-----------QEKKLRVDLERNKRKLEGDLKLA 3273
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E I L D+ +L LKK + + S + D L+ K I + Q +LEE++
Sbjct: 3274 QESILDLENDKQQLDERLKKKDFEYCQLQSKVEDEQTLGLQFQKKIKELQARIEELEEEI 3453
Query: 155 LDIRKKRLQL-KQASE--------SKLLEIQTEKNKQKIDLDSMENSERIKIIRQ----N 201
R R + KQ S+ S+ LE +I+L+ +E +K+ R
Sbjct: 3454 EAERATRAKTEKQRSDYARELEELSERLEEAGGVTSTQIELNKKREAEFLKLRRDLEEAT 3633
Query: 202 LQMEIKITTV 211
LQ E + T+
Sbjct: 3634 LQHEAMVATL 3663
Score = 34.7 bits (78), Expect = 7.0
Identities = 41/161 (25%), Positives = 78/161 (47%), Gaps = 15/161 (9%)
Frame = +1
Query: 53 QLLEYKSMVDASEEKTPEQIMQEKQ-----IEAKIEDLENEIEEVKVAFEIKK-----LA 102
+L + KS +D + E+I Q K+ +E L+ E+ A +KK L
Sbjct: 4777 ELTQVKSEIDRKIAEKDEEIEQLKRNYQRTVETMQSALDAEVRSRNEAIRLKKKMEGDLN 4956
Query: 103 LDRMRLSTALKKNLEKISRQSSV---LMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
++LS A ++ E + SV L D HL + ++ Q+ DL+E+L I +
Sbjct: 4957 EIEIQLSHANRQAAETLKHLRSVQGQLKDTQLHLDDA----LRGQE---DLKEQLA-IVE 5112
Query: 160 KRLQLKQASESKLLEI--QTEKNKQKIDLDSMENSERIKII 198
+R L QA +L QTE+ ++ + + ++++ER++++
Sbjct: 5113 RRANLLQAEVEELRATLEQTERARKLAEQELLDSNERVQLL 5235
>emb|X08065.1|CEMYO1 Caenorhabditis elegans myo-1 gene for myosin heavy chain
Length = 12241
Score = 38.9 bits (89), Expect = 0.37
Identities = 41/207 (19%), Positives = 94/207 (44%), Gaps = 32/207 (15%)
Frame = +2
Query: 37 EDRMTLLLRLRAQTK---QQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVK 93
ED L RL Q+K Q+++E + ++ + + +++ ++++L ++E
Sbjct: 8327 EDEQALANRLTRQSKENAQRIIEIEDELEHERQSRSKADRARAELQRELDELNERLDEQN 8506
Query: 94 VAFEIK------------KLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLE-LNKLI 140
EI+ K D + A + + I R+++ + + + L+ L K
Sbjct: 8507 KQLEIQQDNNKKKDSEIIKFRRDLDEKNMANEDQMAMIRRKNNDQISALTNTLDALQKSK 8686
Query: 141 MKSQQESWDLEEKLLDI-----RKKRLQLKQASESKLLEIQTEKNKQKIDLDSME----- 190
K ++E L+++L DI ++ + +++Q +K EIQ + +QK+D S +
Sbjct: 8687 AKIEKEKGVLQKELDDINAQVDQETKSRVEQERLAKQYEIQVAELQQKVDEQSRQIGEYT 8866
Query: 191 ------NSERIKIIRQNLQMEIKITTV 211
+++ + RQ ++EI + T+
Sbjct: 8867 STKGRLSNDNSDLARQVEELEIHLATI 8947
>ref|NM_059652.1| myosin heavy chain
Length = 5817
Score = 38.9 bits (89), Expect = 0.37
Identities = 41/207 (19%), Positives = 94/207 (44%), Gaps = 32/207 (15%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTK---QQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVK 93
ED L RL Q+K Q+++E + ++ + + +++ ++++L ++E
Sbjct: 3304 EDEQALANRLTRQSKENAQRIIEIEDELEHERQSRSKADRARAELQRELDELNERLDEQN 3483
Query: 94 VAFEIK------------KLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLE-LNKLI 140
EI+ K D + A + + I R+++ + + + L+ L K
Sbjct: 3484 KQLEIQQDNNKKKDSEIIKFRRDLDEKNMANEDQMAMIRRKNNDQISALTNTLDALQKSK 3663
Query: 141 MKSQQESWDLEEKLLDI-----RKKRLQLKQASESKLLEIQTEKNKQKIDLDSME----- 190
K ++E L+++L DI ++ + +++Q +K EIQ + +QK+D S +
Sbjct: 3664 AKIEKEKGVLQKELDDINAQVDQETKSRVEQERLAKQYEIQVAELQQKVDEQSRQIGEYT 3843
Query: 191 ------NSERIKIIRQNLQMEIKITTV 211
+++ + RQ ++EI + T+
Sbjct: 3844 STKGRLSNDNSDLARQVEELEIHLATI 3924
>dbj|AP000493.1|AP000493 Homo sapiens genomic DNA, chromosome 3p21.3, clone:301 to 308,
anti-oncogene region, section 1/5
Length = 200000
Score = 38.9 bits (89), Expect = 0.37
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 39/155 (25%)
Frame = +3
Query: 46 LRAQTKQQLLEYKSMVDASE---EKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLA 102
L+ +Q+ +E+K +V + E E+ + K+ E KI LEN++ +K E KK
Sbjct: 1362 LKNYNQQKDIEHKELVQKLQHFQELGEEKDNRVKEAEEKILTLENQVYSMKAELETKKKE 1541
Query: 103 LDRMRLST--------ALKKNLE----------------KISRQSSVLMDNMK------- 131
L+ + LS AL+ LE KI+ L+ M+
Sbjct: 1542 LEHVNLSVKSKEEELKALEDRLESESAAKLAELKRKAEQKIAAIKKQLLSQMEEKEEQYK 1721
Query: 132 -----HLLELNKLIMKSQQESWDLEEKLLDIRKKR 161
HL ELN + + ++E LEEKL + +
Sbjct: 1722 KGTESHLSELNTKLQEREREVHILEEKLKSVESSQ 1826
>gb|U87265.1|BTU87265 Bos taurus non-muscle myosin heavy chain mRNA, partial cds
Length = 1958
Score = 38.9 bits (89), Expect = 0.37
Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 22/189 (11%)
Frame = +1
Query: 39 RMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEI 98
++ L + L+A Q + + + SEEK + + Q +++EA++ED E + + VA
Sbjct: 643 KLRLEVNLQAMKAQFERDLQGRDEQSEEKKKQLVKQVREMEAELED-ERKQRSIAVAAR- 816
Query: 99 KKLALDRMRLST---ALKKNLEKISRQSSVLMDNMKHLL------------------ELN 137
KKL +D L + KN ++ +Q + MK + E
Sbjct: 817 KKLEMDLKDLEAHIDSANKNRDEAIKQLRKVQAQMKDYMRELDDTRASREEILAQSKENE 996
Query: 138 KLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSE-RIK 196
K + + E L+E+L + + Q +Q + EI K + L+ E RI
Sbjct: 997 KKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEIANSSGKGALALEEKRRLEARIA 1176
Query: 197 IIRQNLQME 205
+ + L+ E
Sbjct: 1177QLEEELEEE 1203
>gb|AF014012.1|AF014012 Gallus gallus restin mRNA, complete cds
Length = 4638
Score = 38.5 bits (88), Expect = 0.49
Identities = 45/194 (23%), Positives = 89/194 (45%), Gaps = 29/194 (14%)
Frame = +1
Query: 44 LRLRAQTKQQLLE--YKSMVDASEE--KTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIK 99
L+L A K Q L + V +EE ++ +++ +++E + L N++ E+K
Sbjct: 3568 LKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESTL 3747
Query: 100 KLALDRMRLS------------TALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQES 147
K +D R S T + LEK+ + +VL L ++ + +
Sbjct: 3748 KKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLESDK 3927
Query: 148 WDLEEKLLDIRKKRLQLKQASE-------------SKLLEIQTEKNKQKIDLDSMENSER 194
LEEK+ ++ +K LK SE + LL+ ++ ++KQ+ ++D + NS
Sbjct: 3928 LKLEEKVKNLEQK---LKAKSEQPLTVTSPSGDIAANLLQDESAEDKQQ-EIDFL-NSVI 4092
Query: 195 IKIIRQNLQMEIKI 208
+ + R+N ++ +KI
Sbjct: 4093 VDLQRRNEELNLKI 4134
Score = 36.2 bits (82), Expect = 2.4
Identities = 43/197 (21%), Positives = 94/197 (46%), Gaps = 3/197 (1%)
Frame = +1
Query: 49 QTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRL 108
+ +Q LL K+ D + + + + +++I +LE ++ A +K++A R RL
Sbjct: 1519 ELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDL-----ALRVKEVAELRGRL 1683
Query: 109 STALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLL---DIRKKRLQLK 165
++ K+++ + S+L + ++ + Q+E L+EK + +K ++
Sbjct: 1684 ESS--KHIDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTL 1857
Query: 166 QASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKV 225
AS ++ + + E K K+D + ENS+ I++ + L E I + Q + + + +K
Sbjct: 1858 SASNERMGK-ENESLKTKLDHANKENSDVIELWKSKL--ESAIASHQQAMEELKVSFNKG 2028
Query: 226 NWAEDPALKEIVLQLEK 242
A+ E+ Q+EK
Sbjct: 2029 VGAQTAEFAELKTQMEK 2079
>ref|NM_062615.1| Caenorhabditis elegans
Length = 1773
Score = 38.5 bits (88), Expect = 0.49
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Frame = +1
Query: 70 EQIMQ--EKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALK---KNLEKISRQSS 124
EQ M EK A++E+LE+++ E E+K L D TA K K + + + +
Sbjct: 1291 EQTMSKMEKTAYAQVENLEHQLTERST--ELKSLKGDLDDTVTARKVAEKRATQTNEKVN 1464
Query: 125 VLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK-------KRLQLKQASESKLLEIQT 177
L + +K E+N+++ K QQ EKL++ +K K+++ Q+ + LL
Sbjct: 1465 KLANELKDEREINQMLRKDQQVWKGQVEKLIESQKTARTEYEKKIEDLQSQVNDLLMHFE 1644
Query: 178 EKNKQKIDLDS 188
+NK K LD+
Sbjct: 1645 TQNKLKEQLDA 1677
>emb|Z69368.1|SPAC27F1 S.pombe chromosome I cosmid c27F1
Length = 23830
Score = 38.5 bits (88), Expect = 0.49
Identities = 37/151 (24%), Positives = 70/151 (45%), Gaps = 7/151 (4%)
Frame = -1
Query: 48 AQTKQQLLEYKSMVDASEEK----TPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLAL 103
A K+++ E +V+A E+K TP +Q + +I+ +++EI + + + ++A
Sbjct: 2251 ASLKKRIHEKSLVVNALEDKKLAATPANDVQNDSLIYRIKSVQDEINRLSTSNKSPEVAS 2072
Query: 104 DRMRL---STALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKK 160
+RL ST + K L I+ +D+ L L + + S+D +
Sbjct: 2071 MNVRLEELSTRVSKMLSDINE-----VDHTIASLSLKLFQAEDTKNSYDQTSPEATQERN 1907
Query: 161 RLQLKQASESKLLEIQTEKNKQKIDLDSMEN 191
R SKL E++ +KN+ K L+ M+N
Sbjct: 1906 R-----TISSKLAEMEKQKNESKAALEQMKN 1829
Score = 35.4 bits (80), Expect = 4.1
Identities = 40/190 (21%), Positives = 88/190 (46%), Gaps = 30/190 (15%)
Frame = -1
Query: 49 QTKQQLLEYKSMVDASEEKTPEQIM--QEKQIEAKIEDLENE----------IEEVKVAF 96
Q ++ LLE +++DA + E+++ Q++++E++ +NE IE+ ++
Sbjct: 9433 QKRESLLETYTLLDAQRKDLEEKVLLSQDRKLESEAIIKQNEERNEEMFQSLIEDKRLCS 9254
Query: 97 EIKKLALDRMRLSTA------------LKKNLEKISRQSSVLMDNMKHL------LELNK 138
+++ DR+R+ + + LE+I + S ++ + + L L
Sbjct: 9253 QVRT-EYDRIRMEASELKIRYHNVDSLMASTLEEIEKLQSSIVHSPEKLKGKIADTSLRI 9077
Query: 139 LIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKII 198
+SQQ D + K+L + LQL + + L++ E ++LD +E++ +
Sbjct: 9076 QNDRSQQVELDKKSKILHTKLNSLQLIEGDLNACLKVLEE---CLVELDKLEHATVLLST 8906
Query: 199 RQNLQMEIKI 208
Q L +I+I
Sbjct: 8905 NQELCDQIEI 8876
>dbj|AB045982.1|AB045982 Patinopecten yessoensis mRNA for myosin, partial cds
Length = 3547
Score = 38.5 bits (88), Expect = 0.49
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 2/162 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAF 96
ED LL+ + ++++ E + + EEK + + + E+ I DLE
Sbjct: 3130 EDTNHKLLKEKRAMEERMSEVTAHLVEEEEKAKQLGKLKNKYESIISDLE---------- 3279
Query: 97 EIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLD 156
+R+R T ++ LEKI R+ L +L + +M+ +Q+ DL+ + L
Sbjct: 3280 -------ERLRKETQARQELEKIRRRLE------SELNDLREQLMEKRQQLEDLQAQ-LS 3417
Query: 157 IRKKRLQ--LKQASESKLLEIQTEKNKQKIDLDSMENSERIK 196
R++ +Q LK+ E + + Q K ++I E +E ++
Sbjct: 3418 KREEEVQHALKKVDEEGVAKSQASKQSREIQSQLQEVTEDLE 3543
>gb|M93676.1|CHKNMHCB Chicken nonmuscle myosin heavy chain (including B1 and B2 inserts)
mRNA, complete cds
Length = 7595
Score = 38.5 bits (88), Expect = 0.49
Identities = 38/182 (20%), Positives = 81/182 (43%), Gaps = 3/182 (1%)
Frame = +3
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEI-EEVKVA 95
ED+ + L+ + + ++ E S + EEK + + E I DLE + +E K
Sbjct: 3138 EDQNSKFLKEKKLMEDRIAECTSQLAEEEEKAKNLAKLKNKQEMMITDLEERLKKEEKTR 3317
Query: 96 FEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNM-KHLLELNKLIMKSQQESWDLEEKL 154
E++K +T L+ + ++ Q L + K EL + + +E+ L
Sbjct: 3318 QELEKAKRKLDGETTDLQDQIAELQAQIEELKIQLAKKEEELQAALARGDEEAVQKNNAL 3497
Query: 155 LDIRKKRLQLKQASESKLLEIQTEK-NKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQ 213
IR+ + Q+ + E ++++EK ++ K + + SE ++ ++ L+ + T Q
Sbjct: 3498 KVIRELQAQIAELQE----DLESEKASRNKAEKQKRDLSEELEALKTELEDTLDTTAAQQ 3665
Query: 214 HV 215
+
Sbjct: 3666 EL 3671
>ref|XM_052590.1| Homo sapiens myosin, heavy polypeptide 1, skeletal muscle, adult
(MYH1), mRNA
Length = 5925
Score = 38.5 bits (88), Expect = 0.49
Identities = 41/185 (22%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK+I +E + ++E ++K+A
Sbjct: 3052 EDKVNTLTKAKIKLEQQVDDLEGSLE-----------QEKKIRMDLERAKRKLEGDLKLA 3198
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E + D+ +L LKK ++S S + D ++L K I + Q +LEE+
Sbjct: 3199 QESTMDIENDKQQLDEKLKKKEFEMSGLQSKIEDEQALGMQLQKKIKELQARIEELEEE- 3375
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
++ ++AS +K EK + + + E SER++ +I++ +
Sbjct: 3376 -------IEAERASRAK-----AEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREA 3519
Query: 215 VFQNL 219
FQ +
Sbjct: 3520 EFQKM 3534
Score = 34.3 bits (77), Expect = 9.2
Identities = 40/161 (24%), Positives = 77/161 (46%), Gaps = 15/161 (9%)
Frame = +1
Query: 53 QLLEYKSMVDASEEKTPEQIMQEKQ-----IEAKIEDLENEIEEVKVAFEIKKLA---LD 104
+L + KS VD + E+I Q K+ +E+ L+ EI A +KK L+
Sbjct: 4702 ELNQVKSEVDRKIAEKDEEIDQMKRNHIRIVESMQSTLDAEIRSRNDAIRLKKKMEGDLN 4881
Query: 105 RMRL-----STALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
M + + + L ++L D HL + ++SQ+ DL+E+L + +
Sbjct: 4882 EMEIQLNHANRMAAEALRNYRNTQAILKDTQLHLDDA----LRSQE---DLKEQLAMV-E 5037
Query: 160 KRLQLKQASESKLLEI--QTEKNKQKIDLDSMENSERIKII 198
+R L QA +L QTE++++ + + ++ SER++++
Sbjct: 5038 RRANLLQAEIEELRATLEQTERSRKIAEQELLDASERVQLL 5160
>gb|M74085.1|CHKMYOSINB Gallus gallus fast myosin heavy chain mRNA, 3' UTR
Length = 3011
Score = 38.5 bits (88), Expect = 0.49
Identities = 41/174 (23%), Positives = 87/174 (49%), Gaps = 11/174 (6%)
Frame = +2
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK++ +E + ++E ++K++
Sbjct: 98 EDKVNTLTKAKTKLEQQVDDLEGSLE-----------QEKKLRMDLERAKRKLEGDLKMS 244
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
+ I L D+ +L LKK +IS+ S + D ++L K I + Q +LEE++
Sbjct: 245 QDTIMDLENDKQQLDEKLKKKDFEISQIQSKIEDEQALGMQLQKKIKELQARIEELEEEI 424
Query: 155 LDIRKKRLQLK--QASESKLLEIQTEKNKQ-------KIDLDSMENSERIKIIR 199
R R + + +A S+ LE +E+ ++ +ID++ +E K+ R
Sbjct: 425 EAERTSRAKAEKHRADLSRELEEISERLEEAGGATATQIDMNKKREAEFQKMRR 586
Score = 34.7 bits (78), Expect = 7.0
Identities = 45/174 (25%), Positives = 83/174 (46%), Gaps = 18/174 (10%)
Frame = +2
Query: 43 LLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQ-----IEAKIEDLENEIEEVKVAFE 97
+LRL+ + Q KS +D + E+I Q K+ +E+ L+ EI A
Sbjct: 1730 ILRLQLELNQ----VKSEIDRKIAEKDEEIDQLKRNHLRIVESMQSTLDAEIRSRNEALR 1897
Query: 98 IKKLA---LDRM--------RLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQE 146
+KK L+ M R++ +KNL VL D HL + +++Q+
Sbjct: 1898 LKKKMEGDLNEMEIQLNHANRVAAEAQKNLRNTQ---GVLKDTQIHLDDA----LRTQE- 2053
Query: 147 SWDLEEKLLDIRKKRLQLKQASESKLLEI--QTEKNKQKIDLDSMENSERIKII 198
DL+E++ + ++R L QA +L QTE++++ + + M+ SER++++
Sbjct: 2054 --DLKEQVAMV-ERRANLLQAEIEELRAALEQTERSRKVAEQELMDASERVQLL 2206
>ref|NM_005963.2| Homo sapiens myosin, heavy polypeptide 1, skeletal muscle, adult
(MYH1), mRNA
Length = 5925
Score = 38.5 bits (88), Expect = 0.49
Identities = 41/185 (22%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK+I +E + ++E ++K+A
Sbjct: 3052 EDKVNTLTKAKIKLEQQVDDLEGSLE-----------QEKKIRMDLERAKRKLEGDLKLA 3198
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E + D+ +L LKK ++S S + D ++L K I + Q +LEE+
Sbjct: 3199 QESAMDIENDKQQLDEKLKKKEFEMSGLQSKIEDEQALGMQLQKKIKELQARIEELEEE- 3375
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
++ ++AS +K EK + + + E SER++ +I++ +
Sbjct: 3376 -------IEAERASRAK-----AEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREA 3519
Query: 215 VFQNL 219
FQ +
Sbjct: 3520 EFQKM 3534
Score = 34.3 bits (77), Expect = 9.2
Identities = 40/161 (24%), Positives = 77/161 (46%), Gaps = 15/161 (9%)
Frame = +1
Query: 53 QLLEYKSMVDASEEKTPEQIMQEKQ-----IEAKIEDLENEIEEVKVAFEIKKLA---LD 104
+L + KS VD + E+I Q K+ +E+ L+ EI A +KK L+
Sbjct: 4702 ELNQVKSEVDRKIAEKDEEIDQMKRNHIRIVESMQSTLDAEIRSRNDAIRLKKKMEGDLN 4881
Query: 105 RMRL-----STALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
M + + + L ++L D HL + ++SQ+ DL+E+L + +
Sbjct: 4882 EMEIQLNHANRMAAEALRNYRNTQAILKDTQLHLDDA----LRSQE---DLKEQLAMV-E 5037
Query: 160 KRLQLKQASESKLLEI--QTEKNKQKIDLDSMENSERIKII 198
+R L QA +L QTE++++ + + ++ SER++++
Sbjct: 5038 RRANLLQAEIEELRATLEQTERSRKIAEQELLDASERVQLL 5160
>gb|AF111785.1|AF111785 Homo sapiens myosin heavy chain IIx/d mRNA, complete cds
Length = 5925
Score = 38.5 bits (88), Expect = 0.49
Identities = 41/185 (22%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Frame = +1
Query: 37 EDRMTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLENEIE-EVKVA 95
ED++ L + + + +QQ+ + + ++ QEK+I +E + ++E ++K+A
Sbjct: 3052 EDKVNTLTKAKIKLEQQVDDLEGSLE-----------QEKKIRMDLERAKRKLEGDLKLA 3198
Query: 96 FE-IKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKL 154
E + D+ +L LKK ++S S + D ++L K I + Q +LEE+
Sbjct: 3199 QESAMDIENDKQQLDEKLKKKEFEMSGLQSKIEDEQALGMQLQKKIKELQARIEELEEE- 3375
Query: 155 LDIRKKRLQLKQASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQMEIKITTVIQH 214
++ ++AS +K EK + + + E SER++ +I++ +
Sbjct: 3376 -------IEAERASRAK-----AEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREA 3519
Query: 215 VFQNL 219
FQ +
Sbjct: 3520 EFQKM 3534
Score = 34.3 bits (77), Expect = 9.2
Identities = 40/161 (24%), Positives = 77/161 (46%), Gaps = 15/161 (9%)
Frame = +1
Query: 53 QLLEYKSMVDASEEKTPEQIMQEKQ-----IEAKIEDLENEIEEVKVAFEIKKLA---LD 104
+L + KS VD + E+I Q K+ +E+ L+ EI A +KK L+
Sbjct: 4702 ELNQVKSEVDRKIAEKDEEIDQMKRNHIRIVESMQSTLDAEIRSRNDAIRLKKKMEGDLN 4881
Query: 105 RMRL-----STALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRK 159
M + + + L ++L D HL + ++SQ+ DL+E+L + +
Sbjct: 4882 EMEIQLNHANRMAAEALRNYRNTQAILKDTQLHLDDA----LRSQE---DLKEQLAMV-E 5037
Query: 160 KRLQLKQASESKLLEI--QTEKNKQKIDLDSMENSERIKII 198
+R L QA +L QTE++++ + + ++ SER++++
Sbjct: 5038 RRANLLQAEIEELRATLEQTERSRKIAEQELLDASERVQLL 5160
>emb|Z22551.1|HSKINEC H.sapiens kinectin gene
Length = 4613
Score = 38.5 bits (88), Expect = 0.49
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Frame = +1
Query: 47 RAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKIEDLEN-EIEEVKVAFEIKKLALDR 105
+ ++ ++LLE + + A++EKT + + QE I+A E++ N ++E+ + K+
Sbjct: 2491 KIKSVEELLEAELLKVANKEKTVQDLKQE--IKALKEEIGNVQLEKAQQLSITSKV---- 2652
Query: 106 MRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRL-QL 164
L LK E+++ +VL + K L K + Q+E+ L+ + ++ + L +
Sbjct: 2653 QELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEA 2832
Query: 165 KQASESKLLEI-QTEKNKQKIDLDSM 189
AS+ + LEI EK + L++M
Sbjct: 2833 SSASQFEELEIVLKEKGNELKRLEAM 2910
>emb|AJ310552.1|MMU310552 Mus musculus mRNA for SMC6 protein
Length = 3302
Score = 38.5 bits (88), Expect = 0.49
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Frame = +1
Query: 64 SEEKTPEQIMQEKQIEAKIEDLENEIEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQS 123
S E T + + + ++++I DLE EIE K + + RLS AL+K+ I R
Sbjct: 1969 SSESTRPKFLS-RDVDSEISDLETEIENKK-----GHIITLQQRLS-ALEKD---IKRNE 2118
Query: 124 SVLMDNMKHLLELNKLIMKSQQESWDLE--EKLLDIRKKRLQLKQASESKLLEIQTEKNK 181
+L H E+ I K+ E +LE E+ + L+ +A E+K+ EKN
Sbjct: 2119 ELLKRCQLHYKEIKMKIRKNISEIRELENIEEHQSVDIATLE-DEAEENKIKMQMVEKNM 2295
Query: 182 QKIDLDSMENSERIKIIRQNLQMEIKI 208
++ ++MEN + +KI +N IK+
Sbjct: 2296 EQ-QKENMENLKSLKIEAENKYDTIKL 2373
>ref|NM_079636.1| Drosophila melanogaster Tropomyosin 1 (Tm1), mRNA
Length = 2438
Score = 38.5 bits (88), Expect = 0.49
Identities = 47/223 (21%), Positives = 101/223 (45%), Gaps = 15/223 (6%)
Frame = +1
Query: 40 MTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKI-----------EDLENE 88
+ +L + QTK+++ +YK + ++ ++++ ++ E+++ EDLE
Sbjct: 466 LDVLKKKMRQTKEEMEKYKDECEEFHKRLQLEVVRREEAESEVAALNRRIQLLEEDLERS 645
Query: 89 IEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESW 148
E + A A S ++K LE + + +++ L KLI + + +
Sbjct: 646 EERLGSATAKLSEASQAADESERIRKALENRTNMEDDKVALLENQLAQAKLIAEEADKKY 825
Query: 149 DLEEKLLDIRKKRLQLK----QASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQM 204
+ + L + ++ L+ + SESK++E++ E +L S+E SE K ++
Sbjct: 826 EEVARKLVLMEQDLERSEEKVELSESKIVELEEELRVVGNNLKSLEVSEE-KATQKEETF 1002
Query: 205 EIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQLEKNVDMM 247
E +I V+ H + ++ +AE V +L+K VD +
Sbjct: 1003ETQI-KVLDHSLKE--AEARAEFAE-----RSVQKLQKEVDRL 1107
>gb|J03502.1|DROTROIIN D.melanogaster tropomyosin II non-muscle isoform mRNA, complete cds
Length = 2438
Score = 38.5 bits (88), Expect = 0.49
Identities = 47/223 (21%), Positives = 101/223 (45%), Gaps = 15/223 (6%)
Frame = +1
Query: 40 MTLLLRLRAQTKQQLLEYKSMVDASEEKTPEQIMQEKQIEAKI-----------EDLENE 88
+ +L + QTK+++ +YK + ++ ++++ ++ E+++ EDLE
Sbjct: 466 LDVLKKKMRQTKEEMEKYKDECEEFHKRLQLEVVRREEAESEVAALNRRIQLLEEDLERS 645
Query: 89 IEEVKVAFEIKKLALDRMRLSTALKKNLEKISRQSSVLMDNMKHLLELNKLIMKSQQESW 148
E + A A S ++K LE + + +++ L KLI + + +
Sbjct: 646 EERLGSATAKLSEASQAADESERIRKALENRTNMEDDKVALLENQLAQAKLIAEEADKKY 825
Query: 149 DLEEKLLDIRKKRLQLK----QASESKLLEIQTEKNKQKIDLDSMENSERIKIIRQNLQM 204
+ + L + ++ L+ + SESK++E++ E +L S+E SE K ++
Sbjct: 826 EEVARKLVLMEQDLERSEEKVELSESKIVELEEELRVVGNNLKSLEVSEE-KATQKEETF 1002
Query: 205 EIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQLEKNVDMM 247
E +I V+ H + ++ +AE V +L+K VD +
Sbjct: 1003ETQI-KVLDHSLKE--AEARAEFAE-----RSVQKLQKEVDRL 1107
>dbj|AB018346.1|AB018346 Homo sapiens mRNA for KIAA0803 protein, partial cds
Length = 5639
Score = 38.5 bits (88), Expect = 0.49
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Frame = +2
Query: 75 EKQIEAKIEDLENEIEEVK---VAFEIKK----LALDRMRLSTAL-KKNLEKIS---RQS 123
E+Q+E E+LEN+ EEV+ + EI+K L + L K ++EK+ ++S
Sbjct: 29 EEQLEQFREELENKNEEVQQLHMQLEIQKKESTTRLQELEQENKLFKDDMEKLGLAIKES 208
Query: 124 SVLMDNMKHLLELNKLIMKSQQESWDLEEKLLDIRKKRLQLKQASESKLLEIQTEKNKQK 183
+ +H+L K Q++ ++++ + K + QLK +++K++E EKN+
Sbjct: 209 DAMSTQDQHVL-FGKFAQIIQEKEVEIDQLNEQVTKLQQQLKITTDNKVIE---EKNELI 376
Query: 184 IDLDS-----MENSERIKIIRQNLQMEI-KITTVIQHVFQNLI-LGSKVN 226
DL++ M + E +K +N + EI ++ VI+ + Q L +G K +
Sbjct: 377 RDLETQIECLMSDQECVK---RNREEEIEQLNEVIEKLQQELANIGQKTS 517
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 19, 2002 12:00 AM
Number of letters in database: 587,334,133
Number of sequences in database: 1,164,257
Lambda K H
0.311 0.128 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 743,693,306
Number of Sequences: 1164257
Number of extensions: 6289486
Number of successful extensions: 34159
Number of sequences better than 10.0: 1074
Number of HSP's better than 10.0 without gapping: 25126
Number of HSP's successfully gapped in prelim test: 1474
Number of HSP's that attempted gapping in prelim test: 6182
Number of HSP's gapped (non-prelim): 30098
length of query: 247
length of database: 1,627,433,809
effective HSP length: 131
effective length of query: 116
effective length of database: 1,474,916,142
effective search space: 171090272472
effective search space used: 171090272472
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 77 (34.3 bits)