TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(736 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,165,784 sequences; 601,717,568 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_002763.1| Homo sapiens prospero-related homeobox 1 (... 1329 0.0
gb|U44060.1|HSU44060 Human homeodomain protein (Prox 1) mRN... 1329 0.0
ref|XM_001994.4| Homo sapiens prospero-related homeobox 1 (... 1312 0.0
ref|NM_008937.1| Mus musculus prospero-related homeobox 1 (... 1295 0.0
gb|AF061576.1|AF061576 Mus musculus prospero-related homeob... 1295 0.0
gb|U46563.1|GGU46563 Gallus gallus homeodomain protein (Pro... 1230 0.0
dbj|AB008773.1|AB008773 Xenopus laevis Prox 1 mRNA, complet... 1156 0.0
gb|AY032595.1| Danio rerio prospero-related homeodomain pro... 1072 0.0
gb|AF063018.1|AF063018 Danio rerio homeodomain protein (Pro... 1069 0.0
dbj|AB008774.1|AB008774 Cynops pyrrhogaster mRNA, partial cds 1065 0.0
emb|AL606537.10|AL606537 Human DNA sequence from clone RP11... 984 0.0
gb|AC011700.5|AC011700 Homo sapiens Chromosome 1 BAC RP11-4... 984 0.0
gb|AF070733.1|AF070733 Notophthalmus viridescens transcript... 549 e-154
gb|AF069290.1|AF069290 Xenopus laevis Prox1 mRNA, partial cds 262 1e-67
ref|XM_063420.1| Homo sapiens similar to HOMEOBOX PROSPERO-... 219 1e-54
gb|AY060680.1| Drosophila melanogaster GH11848 full length ... 213 7e-53
dbj|D10609.1|DROPROSA Drosophila melanogaster mRNA for pros... 212 1e-52
ref|NM_079593.1| Drosophila melanogaster prospero (pros), mRNA 212 1e-52
emb|Z11743.1|DMPROSPER D. melanogaster prospero gene encodi... 212 1e-52
gb|M81389.1|DROPROS D.melanogaster Pros protein (prospero) ... 212 1e-52
ref|NM_066359.1| Caenorhabditis elegans 212 1e-52
ref|XM_081366.1| prospero, mRNA 212 1e-52
gb|AC006530.4|AC006530 Homo sapiens chromosome 14 clone BAC... 114 3e-23
gb|U40760.1|FRU40760 Fugu rubripes prospero_like protein ge... 105 2e-20
gb|L14331.1| Caenorhabditis elegans cosmid K12H4, complete ... 88 3e-15
gb|AC008358.4|AC008358 Drosophila melanogaster, chromosome ... 78 4e-12
gb|AF190403.1|AF190403 Drosophila melanogaster homeodomain ... 78 4e-12
gb|AE003691.2|AE003691 Drosophila melanogaster genomic scaf... 78 4e-12
gb|AF190405.1|AF190405 Drosophila virilis homeodomain trans... 78 4e-12
gb|AC007710.11|AC007710 Drosophila melanogaster, chromosome... 78 4e-12
gb|AC007709.4|AC007709 Drosophila melanogaster, chromosome ... 77 6e-12
ref|XM_063419.1| Homo sapiens similar to homeobox prospero-... 52 3e-04
dbj|AK006828.1|AK006828 Mus musculus adult male testis cDNA... 47 0.009
gb|AY040548.1| Ateles belzebuth chamek prospero-related hom... 46 0.012
emb|AJ299062.1|CAR299062 Cicer arietinum partial mRNA for h... 39 1.5
emb|AL646069.1|AL646069 Ralstonia solanacearum GMI1000 chro... 37 7.2
>ref|NM_002763.1| Homo sapiens prospero-related homeobox 1 (PROX1), mRNA
Length = 2924
Score = 1329 bits (3440), Expect = 0.0
Identities = 673/736 (91%), Positives = 673/736 (91%)
Frame = +1
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 607 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 786
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 787 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 966
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 967 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 1146
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
SVALRGNENEREMAPQSVSPRESYREN LVSA
Sbjct: 1147 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 1326
Query: 241 XXXXDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC
Sbjct: 1327 QQLEDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 1506
Query: 301 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 360
ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM
Sbjct: 1507 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 1686
Query: 361 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 420
SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 1687 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 1866
Query: 421 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASGLVGGHHQPLHQSPLSATTGFTTSTFR 480
LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASGLVGGHHQPLHQSPLSATTGFTTSTFR
Sbjct: 1867 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASGLVGGHHQPLHQSPLSATTGFTTSTFR 2046
Query: 481 HPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXXXX 540
HPFPLPLMAYPFQSPLGAPSGSFSGKDRASPE KM
Sbjct: 2047 HPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSPA 2226
Query: 541 XXXXTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSSN 600
TAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSSN
Sbjct: 2227 HPPSTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSSN 2406
Query: 601 MLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCEL 660
MLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCEL
Sbjct: 2407 MLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCEL 2586
Query: 661 YRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEV 720
YRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEV
Sbjct: 2587 YRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEV 2766
Query: 721 PEFFKSPNCLQELLHE 736
PEFFKSPNCLQELLHE
Sbjct: 2767 PEFFKSPNCLQELLHE 2814
>gb|U44060.1|HSU44060 Human homeodomain protein (Prox 1) mRNA, complete cds
Length = 2924
Score = 1329 bits (3440), Expect = 0.0
Identities = 673/736 (91%), Positives = 673/736 (91%)
Frame = +1
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 607 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 786
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 787 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 966
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 967 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 1146
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
SVALRGNENEREMAPQSVSPRESYREN LVSA
Sbjct: 1147 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 1326
Query: 241 XXXXDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC
Sbjct: 1327 QQLEDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 1506
Query: 301 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 360
ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM
Sbjct: 1507 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 1686
Query: 361 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 420
SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 1687 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 1866
Query: 421 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASGLVGGHHQPLHQSPLSATTGFTTSTFR 480
LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASGLVGGHHQPLHQSPLSATTGFTTSTFR
Sbjct: 1867 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASGLVGGHHQPLHQSPLSATTGFTTSTFR 2046
Query: 481 HPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXXXX 540
HPFPLPLMAYPFQSPLGAPSGSFSGKDRASPE KM
Sbjct: 2047 HPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSPA 2226
Query: 541 XXXXTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSSN 600
TAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSSN
Sbjct: 2227 HPPSTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSSN 2406
Query: 601 MLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCEL 660
MLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCEL
Sbjct: 2407 MLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCEL 2586
Query: 661 YRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEV 720
YRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEV
Sbjct: 2587 YRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEV 2766
Query: 721 PEFFKSPNCLQELLHE 736
PEFFKSPNCLQELLHE
Sbjct: 2767 PEFFKSPNCLQELLHE 2814
>ref|XM_001994.4| Homo sapiens prospero-related homeobox 1 (PROX1), mRNA
Length = 2927
Score = 1312 bits (3396), Expect = 0.0
Identities = 667/737 (90%), Positives = 668/737 (90%), Gaps = 1/737 (0%)
Frame = +3
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 609 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 788
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 789 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 968
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 969 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 1148
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
SVALRGNENEREMAPQSVSPRESYREN LVSA
Sbjct: 1149 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 1328
Query: 241 XXXXDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQL +QEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC
Sbjct: 1329 QQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 1508
Query: 301 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 360
ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM
Sbjct: 1509 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 1688
Query: 361 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 420
SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 1689 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 1868
Query: 421 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASG-LVGGHHQPLHQSPLSATTGFTTSTF 479
LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASG GGHHQPLHQSPLSATTGFTTSTF
Sbjct: 1869 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASGPAAGGHHQPLHQSPLSATTGFTTSTF 2048
Query: 480 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXXX 539
RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPE KM
Sbjct: 2049 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 2228
Query: 540 XXXXXTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 599
TAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS
Sbjct: 2229 AHPPSTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 2408
Query: 600 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 659
NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE
Sbjct: 2409 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 2588
Query: 660 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 719
LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE
Sbjct: 2589 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 2768
Query: 720 VPEFFKSPNCLQELLHE 736
VPE FKSPNCLQELLHE
Sbjct: 2769 VPEIFKSPNCLQELLHE 2819
>ref|NM_008937.1| Mus musculus prospero-related homeobox 1 (Prox1), mRNA
Length = 2520
Score = 1295 bits (3350), Expect = 0.0
Identities = 656/737 (89%), Positives = 665/737 (90%), Gaps = 1/737 (0%)
Frame = +2
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 68 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 247
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 248 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 427
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFD+DRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 428 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 607
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
SVALRGNENEREMAPQSVSPRESYREN LVSA
Sbjct: 608 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 787
Query: 241 XXXXDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQL +QEKFYQ+YDSTDSENDEDG+LSEDSMRSEILDARAQDSVGRSDNEMC
Sbjct: 788 QQLEDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMC 967
Query: 301 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 360
ELDPGQFIDRARALIREQEMAENKPKREG+NKERDHGPNSLQPEGKHLAETLKQELNTAM
Sbjct: 968 ELDPGQFIDRARALIREQEMAENKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNTAM 1147
Query: 361 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 420
SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 1148SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 1327
Query: 421 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASG-LVGGHHQPLHQSPLSATTGFTTSTF 479
LDTFG+VQM SSTDQTEALPLVVRKNSS+QSASG GGHHQPLHQSPLSAT GFTT +F
Sbjct: 1328LDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSF 1507
Query: 480 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXXX 539
RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPE KM
Sbjct: 1508RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 1687
Query: 540 XXXXXTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 599
TAEGLSLSLIKSECGDLQDMS+ISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS
Sbjct: 1688AHPPSTAEGLSLSLIKSECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 1867
Query: 600 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 659
NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE
Sbjct: 1868NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 2047
Query: 660 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 719
LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE
Sbjct: 2048LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 2227
Query: 720 VPEFFKSPNCLQELLHE 736
VPE FKSPNCLQELLHE
Sbjct: 2228VPEIFKSPNCLQELLHE 2278
>gb|AF061576.1|AF061576 Mus musculus prospero-related homeobox 1 (Prox1) mRNA, complete cds
Length = 2520
Score = 1295 bits (3350), Expect = 0.0
Identities = 656/737 (89%), Positives = 665/737 (90%), Gaps = 1/737 (0%)
Frame = +2
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 68 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 247
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 248 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 427
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFD+DRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 428 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 607
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
SVALRGNENEREMAPQSVSPRESYREN LVSA
Sbjct: 608 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 787
Query: 241 XXXXDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQL +QEKFYQ+YDSTDSENDEDG+LSEDSMRSEILDARAQDSVGRSDNEMC
Sbjct: 788 QQLEDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMC 967
Query: 301 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 360
ELDPGQFIDRARALIREQEMAENKPKREG+NKERDHGPNSLQPEGKHLAETLKQELNTAM
Sbjct: 968 ELDPGQFIDRARALIREQEMAENKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNTAM 1147
Query: 361 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 420
SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 1148SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 1327
Query: 421 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASG-LVGGHHQPLHQSPLSATTGFTTSTF 479
LDTFG+VQM SSTDQTEALPLVVRKNSS+QSASG GGHHQPLHQSPLSAT GFTT +F
Sbjct: 1328LDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSF 1507
Query: 480 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXXX 539
RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPE KM
Sbjct: 1508RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 1687
Query: 540 XXXXXTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 599
TAEGLSLSLIKSECGDLQDMS+ISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS
Sbjct: 1688AHPPSTAEGLSLSLIKSECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 1867
Query: 600 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 659
NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE
Sbjct: 1868NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 2047
Query: 660 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 719
LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE
Sbjct: 2048LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 2227
Query: 720 VPEFFKSPNCLQELLHE 736
VPE FKSPNCLQELLHE
Sbjct: 2228VPEIFKSPNCLQELLHE 2278
>gb|U46563.1|GGU46563 Gallus gallus homeodomain protein (Prox 1) mRNA, complete cds
Length = 3322
Score = 1230 bits (3182), Expect = 0.0
Identities = 626/737 (84%), Positives = 643/737 (86%), Gaps = 1/737 (0%)
Frame = +2
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 68 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 247
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEK NVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 248 HADGEKPNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 427
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQED+CSNSSRDSP ECLSPFGRPTMSQFD+DRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 428 SEVHQEDVCSNSSRDSPQECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 607
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
VALRGNENERE+ PQSVSPRESYREN LVSA
Sbjct: 608 RVALRGNENEREIRPQSVSPRESYRENKRKQNWPQQQQQSFQQLVSARKEQKREERRQLK 787
Query: 241 XXXXDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQL +QE+FYQIYDSTDSENDEDGNLSED MRSE +DA+A DSVGRSDNEMC
Sbjct: 788 QQLEDMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMRSETVDAQAGDSVGRSDNEMC 967
Query: 301 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 360
ELDPGQFIDRARALIREQE+ ENKPKREG KE+D GPNS PEGKHLAETLKQELNTAM
Sbjct: 968 ELDPGQFIDRARALIREQEIGENKPKREG-PKEKDQGPNSFHPEGKHLAETLKQELNTAM 1144
Query: 361 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 420
SQVVDTVVKVFS+KPSRQ+PQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 1145SQVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 1324
Query: 421 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASG-LVGGHHQPLHQSPLSATTGFTTSTF 479
LDTF +V M +TDQT+ALPLVVRKNSSDQ AS GGHH LHQSPLSAT GF+TS+F
Sbjct: 1325LDTFSSVPMPGATDQTDALPLVVRKNSSDQPASAPPAGGHHASLHQSPLSATAGFSTSSF 1504
Query: 480 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXXX 539
RHPFPLPLMAYPFQSPLGAPS SF GK+RASPE KM
Sbjct: 1505RHPFPLPLMAYPFQSPLGAPSASFPGKERASPESLDLTRETTSLRTKMSSHHMNHHPCSP 1684
Query: 540 XXXXXTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 599
AEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS
Sbjct: 1685AHPPSAAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 1864
Query: 600 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 659
NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE
Sbjct: 1865NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 2044
Query: 660 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 719
LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE
Sbjct: 2045LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 2224
Query: 720 VPEFFKSPNCLQELLHE 736
VPE FKSPNCLQELLHE
Sbjct: 2225VPEIFKSPNCLQELLHE 2275
>dbj|AB008773.1|AB008773 Xenopus laevis Prox 1 mRNA, complete cds
Length = 2483
Score = 1156 bits (2990), Expect = 0.0
Identities = 588/740 (79%), Positives = 627/740 (84%), Gaps = 4/740 (0%)
Frame = +1
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDST LLSRQTKRRRVDIGVKRTVGTASAFFAKA ATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 1 MPDHDSTGLLSRQTKRRRVDIGVKRTVGTASAFFAKASATFFSAMNPQGSEQDVEYSVVQ 180
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKN GTEPSFQASGLSS G
Sbjct: 181 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNCGTEPSFQASGLSSAG 360
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 180
SE+HQED C NSSRDSP ECLSPFGRPTM+Q+DMDRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 361 SEIHQEDACINSSRDSPQECLSPFGRPTMNQYDMDRLCDEHLRAKRARVENIIRGMSHSP 540
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
+VALRGNEN+R+ AP+S+SPRESYREN LVSA
Sbjct: 541 NVALRGNENDRDGAPRSISPRESYRENRRKQKLPQQQQQSFQELVSARKEQKREERRQLK 720
Query: 241 XXXXDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQL +QEKFYQIYDSTDSEN+EDGNLSED M SEI+DARAQDS+GRS+NEM
Sbjct: 721 QQLEDMQKQLRQLQEKFYQIYDSTDSENNEDGNLSEDGMHSEIIDARAQDSMGRSNNEMF 900
Query: 301 ELDPGQFIDRARALIREQEMA-ENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTA 359
+LDPGQFIDRARALIRE ++A +N K++ K++D+ + QPEGKHLAE LKQELN A
Sbjct: 901 DLDPGQFIDRARALIREHQIASDNHHKKDAPPKDKDNLHHPFQPEGKHLAEALKQELNAA 1080
Query: 360 MSQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPN 419
M+QVVDTVVKVFSAKP RQ+PQVFPPLQIPQARFA+NGE+HNFHTANQRLQCFGDVIIPN
Sbjct: 1081MAQVVDTVVKVFSAKPIRQLPQVFPPLQIPQARFAINGEHHNFHTANQRLQCFGDVIIPN 1260
Query: 420 PLDTFGNVQMASSTDQTEALPLVVRKNSSDQSASG-LVGGHHQPLHQSPLSATTGFTTST 478
PLDTF NV M SSTDQTEALPLVVRKNS+DQSASG G HH LHQSPLSA F++S+
Sbjct: 1261PLDTFSNVPMPSSTDQTEALPLVVRKNSNDQSASGPPPGSHHPSLHQSPLSAAASFSSSS 1440
Query: 479 FRHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXX 538
FRHPFPLPLMAYPFQ+PLGAP SF GKD +SPE KM
Sbjct: 1441FRHPFPLPLMAYPFQNPLGAPFISFQGKDSSSPESLDLTRETTSLRTKMSSHHMNHHPCS 1620
Query: 539 XXXXXXTAEGLSLSLIKSECGDLQDMSEISPYSGSA--MQEGLSPNHLKKAKLMFFYTRY 596
+ EGLSLS IKSECGD+QDMS+ISPYSGSA MQEGLSPNHLKKAKLMFFYTRY
Sbjct: 1621PAHPPSSTEGLSLSFIKSECGDMQDMSDISPYSGSALYMQEGLSPNHLKKAKLMFFYTRY 1800
Query: 597 PSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITR 656
PSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDG+TSTEEL ITR
Sbjct: 1801PSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGITSTEELCITR 1980
Query: 657 DCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKL 716
DCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWK AIYKVICKL
Sbjct: 1981DCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKNAIYKVICKL 2160
Query: 717 DSEVPEFFKSPNCLQELLHE 736
DSEVP+ F+SPNCLQELLHE
Sbjct: 2161DSEVPDIFRSPNCLQELLHE 2220
>gb|AY032595.1| Danio rerio prospero-related homeodomain protein 1 (prox1) mRNA,
complete cds
Length = 2839
Score = 1072 bits (2772), Expect = 0.0
Identities = 556/742 (74%), Positives = 603/742 (80%), Gaps = 6/742 (0%)
Frame = +1
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDST+LLSRQTKRRRVDIGVKRTVG AS F +A+ATF SAMNP GSEQDVE SVVQ
Sbjct: 58 MPDHDSTSLLSRQTKRRRVDIGVKRTVGQASVVFTRAKATFLSAMNPHGSEQDVECSVVQ 237
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDA+MPFPGATIISQLLKNN+ KNGG+EP+FQ SGLSSTG
Sbjct: 238 HADGEKSNVLRKLLKRANSYEDAVMPFPGATIISQLLKNNLTKNGGSEPNFQGSGLSSTG 417
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 180
SE+ QED CSNSSR SP ECLSPF RP+M+QF+M+RL DEHLRAKRARVENIIRGMSHSP
Sbjct: 418 SEMQQEDACSNSSRGSPQECLSPFSRPSMTQFEMERLTDEHLRAKRARVENIIRGMSHSP 597
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
SV LR +N+RE A Q SPRE+YREN LVSA
Sbjct: 598 SVTLRAGDNDREGAAQPPSPRENYRENKRKQKLPQQQQQSFQQLVSARKEQKHEERRQLK 777
Query: 241 XXXXDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSV-GRSDNEM 299
DMQKQL +QEKFYQIYDSTDSENDEDGNLSEDSMRS+ +D RA DSV RSDNEM
Sbjct: 778 LQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSDGMDNRAHDSVPDRSDNEM 957
Query: 300 CELDPGQFIDRARALIREQEMAE-NKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNT 358
+LDPG F+DRARALIREQ M E +KPKR+G+ + + GP S+ EGK LAETLKQELNT
Sbjct: 958 SDLDPGHFLDRARALIREQSMMEGDKPKRDGS-RGKSQGPTSMHAEGKQLAETLKQELNT 1134
Query: 359 AMSQVVDTVVKVFSAKPSRQVPQVFPPLQIPQA-RFAVNGENHNFHTANQRLQCFGDVII 417
AMSQVVDTVVKVF AKP R VPQVFPPL + RFAVNGEN NFHTANQRLQCFGDVII
Sbjct: 1135AMSQVVDTVVKVF-AKPPRPVPQVFPPLHMESPDRFAVNGENPNFHTANQRLQCFGDVII 1311
Query: 418 PNPLDTFGNVQMASSTDQTEALPLVVRKNSSDQSAS-GLVGGHHQ--PLHQSPLSATTGF 474
PNPLDTFG++Q+ +S DQTEALPLVVRKNSSDQ+ S GGHH LH PLS+T GF
Sbjct: 1312PNPLDTFGSMQVPNSNDQTEALPLVVRKNSSDQTGSLSTPGGHHHHPSLHPPPLSSTMGF 1491
Query: 475 TTSTFRHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXX 534
+ +FRHPFPLPLM YPFQSPLGAP+G + GKDR+SPE KM
Sbjct: 1492SPPSFRHPFPLPLMGYPFQSPLGAPTGPYPGKDRSSPESLDLSRETTSLRTKMSSNHLSH 1671
Query: 535 XXXXXXXXXXTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYT 594
EGLSLSLIKSECGDLQDMS+ISPYSGS +QEGLSPNHLKKAKLMFFYT
Sbjct: 1672HRSISPTHPGN-EGLSLSLIKSECGDLQDMSDISPYSGSTIQEGLSPNHLKKAKLMFFYT 1848
Query: 595 RYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSI 654
RYPSSNMLK +FSDVKFNRCITSQLIKWFSNFREFYYIQMEK+ARQAINDGVT +EELS+
Sbjct: 1849RYPSSNMLKMFFSDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQAINDGVTGSEELSV 2028
Query: 655 TRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVIC 714
+RDCEL+RALNMHYNKANDFEVPERFLEVAQITLREFFNAI+AGKDVDPSWKKAIYKVIC
Sbjct: 2029SRDCELFRALNMHYNKANDFEVPERFLEVAQITLREFFNAIVAGKDVDPSWKKAIYKVIC 2208
Query: 715 KLDSEVPEFFKSPNCLQELLHE 736
KLDSEVPE FKSPNCLQELLHE
Sbjct: 2209KLDSEVPEIFKSPNCLQELLHE 2274
>gb|AF063018.1|AF063018 Danio rerio homeodomain protein (Prox1) mRNA, complete cds
Length = 2500
Score = 1069 bits (2764), Expect = 0.0
Identities = 554/742 (74%), Positives = 602/742 (80%), Gaps = 6/742 (0%)
Frame = +3
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDST+LLSRQTKRRRVDIGVKRTVG AS F +A+ATF SAMNP GSEQDVE SVVQ
Sbjct: 69 MPDHDSTSLLSRQTKRRRVDIGVKRTVGQASVVFTRAKATFLSAMNPHGSEQDVECSVVQ 248
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDA+MPFPGATIISQLLKNN+ KNGG+EP+FQ SGLSSTG
Sbjct: 249 HADGEKSNVLRKLLKRANSYEDAVMPFPGATIISQLLKNNLTKNGGSEPNFQGSGLSSTG 428
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 180
SE+ QED CSNSSR SP ECLSPF RP+M+QF+M+RL DEHLRAKRARVENIIRGMSHSP
Sbjct: 429 SEMQQEDACSNSSRGSPQECLSPFSRPSMTQFEMERLTDEHLRAKRARVENIIRGMSHSP 608
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
SV LR +N+RE A Q SPRE+YREN LVSA
Sbjct: 609 SVTLRAGDNDREGAAQPPSPRENYRENKRKQKLPQQQQQSFQQLVSARKEQKHEERRQLK 788
Query: 241 XXXXDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSV-GRSDNEM 299
DMQKQL +QEKFYQIYDSTDSENDEDGNLSEDSMRS+ +D RA DSV RSDNEM
Sbjct: 789 LQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSDGMDNRAHDSVPDRSDNEM 968
Query: 300 CELDPGQFIDRARALIREQEMAE-NKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNT 358
+LDPG F+DRARALIREQ M E +KPKR+G+ + + GP S+ EGK +AETLKQELNT
Sbjct: 969 SDLDPGHFLDRARALIREQSMMEGDKPKRDGS-RGKSQGPTSMHAEGKQMAETLKQELNT 1145
Query: 359 AMSQVVDTVVKVFSAKPSRQVPQVFPPLQIPQA-RFAVNGENHNFHTANQRLQCFGDVII 417
AMSQVVDTVVKVF AKP R VPQVFPPL + RFAVNGEN NFHTANQRLQCFGDVII
Sbjct: 1146AMSQVVDTVVKVF-AKPPRPVPQVFPPLHMESPDRFAVNGENPNFHTANQRLQCFGDVII 1322
Query: 418 PNPLDTFGNVQMASSTDQTEALPLVVRKNSSDQSAS-GLVGGHHQ--PLHQSPLSATTGF 474
PNPLDTF ++Q+ +S DQTEALPLVVRKNSSDQ+ S GGHH LH PLS+T GF
Sbjct: 1323PNPLDTFASMQVPNSNDQTEALPLVVRKNSSDQTGSLSTPGGHHHHPSLHPPPLSSTMGF 1502
Query: 475 TTSTFRHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXX 534
+ +FRHPFPLPLM YPFQSPLGAP+G + GKDR+SPE KM
Sbjct: 1503SPPSFRHPFPLPLMGYPFQSPLGAPTGPYPGKDRSSPESLDLSRETTSLRTKMSSNHLSH 1682
Query: 535 XXXXXXXXXXTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYT 594
EGLSLSLIKSECGDLQDMS+ISPYSGS +QEGLSPNHLKKAKLMFFYT
Sbjct: 1683HRSISPTHPGN-EGLSLSLIKSECGDLQDMSDISPYSGSTIQEGLSPNHLKKAKLMFFYT 1859
Query: 595 RYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSI 654
RYPSSNMLK +FSDVKFNRCITSQLIKWFSNFREFYYIQMEK+ARQAINDGVT +EELS+
Sbjct: 1860RYPSSNMLKMFFSDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQAINDGVTGSEELSV 2039
Query: 655 TRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVIC 714
+RDCEL+RALNMHYNKANDFEVPERFLEVAQITLREFFNAI+AGKDVDPSWKKAIYKVIC
Sbjct: 2040SRDCELFRALNMHYNKANDFEVPERFLEVAQITLREFFNAIVAGKDVDPSWKKAIYKVIC 2219
Query: 715 KLDSEVPEFFKSPNCLQELLHE 736
KLDSEVPE FKSPNCLQELLHE
Sbjct: 2220KLDSEVPEIFKSPNCLQELLHE 2285
>dbj|AB008774.1|AB008774 Cynops pyrrhogaster mRNA, partial cds
Length = 2060
Score = 1065 bits (2755), Expect = 0.0
Identities = 549/690 (79%), Positives = 583/690 (83%), Gaps = 2/690 (0%)
Frame = +1
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHD T LLSRQTKRRRVDIGVKRTVGTASA FA +RA+FF+A N QGSEQDVEYSVVQ
Sbjct: 1 MPDHDCTGLLSRQTKRRRVDIGVKRTVGTASAIFANSRASFFNATNSQGSEQDVEYSVVQ 180
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGG EPSFQASGLSSTG
Sbjct: 181 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGNEPSFQASGLSSTG 360
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 180
SE+HQED+CSNSSRDSP ECLSPFGRP MSQFDM+RLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 361 SEIHQEDMCSNSSRDSPQECLSPFGRPPMSQFDMERLCDEHLRAKRARVENIIRGMSHSP 540
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
+V++RGNENERE APQS+SPRESYREN LVSA
Sbjct: 541 NVSMRGNENEREGAPQSISPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 720
Query: 241 XXXXDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQL +QEKFYQIYDSTDSEN DGNLSEDSM SEI+D RA+DSVGRSD+EM
Sbjct: 721 QQLEDMQKQLRQLQEKFYQIYDSTDSEN--DGNLSEDSMHSEIMDGRAEDSVGRSDHEMF 894
Query: 301 ELDPGQFIDRARALIREQEM-AENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTA 359
+LDPGQFIDRARALIREQE+ AENKPKREG ++E+DHG NS PEGKHLAETLKQELNTA
Sbjct: 895 DLDPGQFIDRARALIREQEIAAENKPKREG-HREKDHGHNSCHPEGKHLAETLKQELNTA 1071
Query: 360 MSQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPN 419
MSQVVDTVVKVFS+KPSRQ+PQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPN
Sbjct: 1072MSQVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPN 1251
Query: 420 PLDTFGNVQMASSTDQTEALPLVVRKNSSDQSASG-LVGGHHQPLHQSPLSATTGFTTST 478
PL+TF N+Q+ +S DQTEALPLVVRKNSS+ SASG G HH LHQSPLSA F +S+
Sbjct: 1252PLNTFSNMQLPNSADQTEALPLVVRKNSSEHSASGPPPGSHHPSLHQSPLSAAASFASSS 1431
Query: 479 FRHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXX 538
FRHPFPLPLMAYPFQ+ L +P SFS KDRASPE KM
Sbjct: 1432FRHPFPLPLMAYPFQT-LWSPFWSFSAKDRASPESLDLTRETASLRTKMSSHHLNHHPCS 1608
Query: 539 XXXXXXTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPS 598
T EGLSLSLIKSECGD+QDM+EISPYSG+AMQEGLSPNHLKKAKLMFFYTRYPS
Sbjct: 1609PAHPGSTNEGLSLSLIKSECGDMQDMAEISPYSGNAMQEGLSPNHLKKAKLMFFYTRYPS 1788
Query: 599 SNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDC 658
SNM KTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGV ST+ELSITRDC
Sbjct: 1789SNMPKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVVSTDELSITRDC 1968
Query: 659 ELYRALNMHYNKANDFEVPERFLEVAQITL 688
ELYRALNMHYNKANDFEVPERFLEVAQITL
Sbjct: 1969ELYRALNMHYNKANDFEVPERFLEVAQITL 2058
>emb|AL606537.10|AL606537 Human DNA sequence from clone RP11-53A1 on chromosome 1, complete
sequence [Homo sapiens]
Length = 116821
Score = 984 bits (2544), Expect = 0.0
Identities = 506/576 (87%), Positives = 508/576 (87%), Gaps = 1/576 (0%)
Frame = +3
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 57804 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 57983
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 57984 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 58163
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 58164 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 58343
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
SVALRGNENEREMAPQSVSPRESYREN LVSA
Sbjct: 58344 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 58523
Query: 241 XXXXDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQL +QEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC
Sbjct: 58524 QQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 58703
Query: 301 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 360
ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM
Sbjct: 58704 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 58883
Query: 361 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 420
SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 58884 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 59063
Query: 421 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASG-LVGGHHQPLHQSPLSATTGFTTSTF 479
LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASG GGHHQPLHQSPLSATTGFTTSTF
Sbjct: 59064 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASGPAAGGHHQPLHQSPLSATTGFTTSTF 59243
Query: 480 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXXX 539
RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPE KM
Sbjct: 59244 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 59423
Query: 540 XXXXXTAEGLSLSLIKSECGDLQDMSEISPYSGSAM 575
TAEGLSLSLIKSECGDLQDMSEISPYSGSA+
Sbjct: 59424 AHPPSTAEGLSLSLIKSECGDLQDMSEISPYSGSAI 59531
Score = 140 bits (354), Expect = 4e-31
Identities = 66/67 (98%), Positives = 67/67 (99%)
Frame = +2
Query: 610 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 669
+FNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN
Sbjct: 72785 QFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 72964
Query: 670 KANDFEV 676
KANDFEV
Sbjct: 72965 KANDFEV 72985
Score = 126 bits (316), Expect = 9e-27
Identities = 60/62 (96%), Positives = 61/62 (97%)
Frame = +3
Query: 675 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEFFKSPNCLQELL 734
+VPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPE FKSPNCLQELL
Sbjct: 96912 QVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQELL 97091
Query: 735 HE 736
HE
Sbjct: 97092 HE 97097
Score = 78.6 bits (192), Expect = 2e-12
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = +1
Query: 573 SAMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK 610
S MQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK
Sbjct: 66427 SYMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK 66540
>gb|AC011700.5|AC011700 Homo sapiens Chromosome 1 BAC RP11-478J18 (Roswell Park Cancer
Institute Human BAC Library) complete sequence
Length = 154732
Score = 984 bits (2544), Expect = 0.0
Identities = 506/576 (87%), Positives = 508/576 (87%), Gaps = 1/576 (0%)
Frame = -2
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 25185 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 25006
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 25005 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 24826
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 24825 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 24646
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
SVALRGNENEREMAPQSVSPRESYREN LVSA
Sbjct: 24645 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 24466
Query: 241 XXXXDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQL +QEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC
Sbjct: 24465 QQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 24286
Query: 301 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 360
ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM
Sbjct: 24285 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 24106
Query: 361 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 420
SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 24105 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 23926
Query: 421 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASG-LVGGHHQPLHQSPLSATTGFTTSTF 479
LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASG GGHHQPLHQSPLSATTGFTTSTF
Sbjct: 23925 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASGPAAGGHHQPLHQSPLSATTGFTTSTF 23746
Query: 480 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXXX 539
RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPE KM
Sbjct: 23745 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 23566
Query: 540 XXXXXTAEGLSLSLIKSECGDLQDMSEISPYSGSAM 575
TAEGLSLSLIKSECGDLQDMSEISPYSGSA+
Sbjct: 23565 AHPPSTAEGLSLSLIKSECGDLQDMSEISPYSGSAI 23458
Score = 140 bits (354), Expect = 4e-31
Identities = 66/67 (98%), Positives = 67/67 (99%)
Frame = -2
Query: 610 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 669
+FNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN
Sbjct: 10203 QFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 10024
Query: 670 KANDFEV 676
KANDFEV
Sbjct: 10023 KANDFEV 10003
Score = 78.6 bits (192), Expect = 2e-12
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = -3
Query: 573 SAMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK 610
S MQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK
Sbjct: 16562 SYMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK 16449
>gb|AF070733.1|AF070733 Notophthalmus viridescens transcription factor Prox1 (Prox1) gene,
partial cds
Length = 1064
Score = 549 bits (1414), Expect = e-154
Identities = 285/357 (79%), Positives = 304/357 (84%), Gaps = 1/357 (0%)
Frame = +1
Query: 41 FFSAMNPQGSEQDVEYSVVQHADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNN 100
FF+AMN QGSEQDVEYSVVQHADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNN
Sbjct: 1 FFNAMNSQGSEQDVEYSVVQHADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNN 180
Query: 101 MNKNGGTEPSFQASGLSSTGSEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDE 160
MNKNGG EPSFQASGLSSTGSE+HQED+CSNSSRDSP ECLSPFGRP MSQFDM+RLCDE
Sbjct: 181 MNKNGGNEPSFQASGLSSTGSEIHQEDMCSNSSRDSPQECLSPFGRPPMSQFDMERLCDE 360
Query: 161 HLRAKRARVENIIRGMSHSPSVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXX 220
HLRAKRARVENIIRGMSHSP+V++RGNENERE APQS+SPRESYREN
Sbjct: 361 HLRAKRARVENIIRGMSHSPNVSMRGNENEREGAPQSISPRESYRENKRKQKLPQQQQQS 540
Query: 221 XXXLVSAXXXXXXXXXXXXXXXXXDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMR 280
LVSA DMQKQL +QEKFYQIYDSTDSEN DGNLSEDSM
Sbjct: 541 FQQLVSARKEQKREERRQLKQQLEDMQKQLRQLQEKFYQIYDSTDSEN--DGNLSEDSMH 714
Query: 281 SEILDARAQDSVGRSDNEMCELDPGQFIDRARALIREQEM-AENKPKREGNNKERDHGPN 339
SEI+D RA DSVGRSD+E+ +LDPGQFIDRARALIREQE+ AENKPKREG ++E+DHG N
Sbjct: 715 SEIMDGRAADSVGRSDHELFDLDPGQFIDRARALIREQEIAAENKPKREG-HREKDHGHN 891
Query: 340 SLQPEGKHLAETLKQELNTAMSQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVN 396
S PEGKHLAETLKQELNTAMSQVVDTVVKVFS+KPSR +PQ FPPLQIPQARFAVN
Sbjct: 892 SCHPEGKHLAETLKQELNTAMSQVVDTVVKVFSSKPSRHLPQDFPPLQIPQARFAVN 1062
>gb|AF069290.1|AF069290 Xenopus laevis Prox1 mRNA, partial cds
Length = 394
Score = 262 bits (669), Expect = 1e-67
Identities = 125/131 (95%), Positives = 128/131 (97%)
Frame = +1
Query: 581 PNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQ 640
PNH KKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQME+YARQ
Sbjct: 1 PNHFKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMERYARQ 180
Query: 641 AINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKD 700
AINDG+TSTEEL ITRDCELYRALNMHYNKAN+FEVPERFLEVAQITLRE FNAIIAGKD
Sbjct: 181 AINDGITSTEELCITRDCELYRALNMHYNKANNFEVPERFLEVAQITLRESFNAIIAGKD 360
Query: 701 VDPSWKKAIYK 711
VDPSWKKAIYK
Sbjct: 361 VDPSWKKAIYK 393
>ref|XM_063420.1| Homo sapiens similar to HOMEOBOX PROSPERO-LIKE PROTEIN PROX1 (PROX
1) (LOC122959), mRNA
Length = 429
Score = 219 bits (557), Expect = 1e-54
Identities = 100/137 (72%), Positives = 120/137 (86%)
Frame = +1
Query: 590 MFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTST 649
MFF+TRYPSSN+LK YF DV+FNRCITSQ+IKWFSNFREFYYIQMEK ARQAI+DGVT+
Sbjct: 1 MFFFTRYPSSNLLKVYFPDVQFNRCITSQMIKWFSNFREFYYIQMEKSARQAISDGVTNP 180
Query: 650 EELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAI 709
+ L + R+ EL++ALNMHYNK NDFEVP+ FLE+A +TL+EFF A+ AG+D DPSWKK I
Sbjct: 181 KMLVVLRNSELFQALNMHYNKGNDFEVPDCFLEIASLTLQEFFRAVSAGRDSDPSWKKPI 360
Query: 710 YKVICKLDSEVPEFFKS 726
YK+I KLDS++PE FKS
Sbjct: 361 YKIISKLDSDIPEIFKS 411
>gb|AY060680.1| Drosophila melanogaster GH11848 full length cDNA
Length = 3441
Score = 213 bits (541), Expect = 7e-53
Identities = 104/181 (57%), Positives = 135/181 (74%), Gaps = 2/181 (1%)
Frame = +3
Query: 555 KSECG--DLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFN 612
+SEC D+Q ++P S + L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN
Sbjct: 1800 QSECNSADMQ-FDGMAPTSST-----LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFN 1961
Query: 613 RCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYNKAN 672
+ T+QL+KWFSNFREFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN+ N
Sbjct: 1962 KNNTAQLVKWFSNFREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNN 2141
Query: 673 DFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEFFKSPNCLQE 732
EVP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE+FKSPN L++
Sbjct: 2142 HIEVPQNFRFVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQ 2321
Query: 733 L 733
L
Sbjct: 2322 L 2324
>dbj|D10609.1|DROPROSA Drosophila melanogaster mRNA for prospero, complete cds
Length = 5607
Score = 212 bits (540), Expect = 1e-52
Identities = 97/155 (62%), Positives = 123/155 (78%)
Frame = +3
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYA 638
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFREFYYIQMEKYA
Sbjct: 4044 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFREFYYIQMEKYA 4223
Query: 639 RQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAG 698
RQA+ +G+ + ++L I D ELYR LN+HYN+ N EVP+ F V + TLREFF AI G
Sbjct: 4224 RQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEVPQNFRFVVESTLREFFRAIQGG 4403
Query: 699 KDVDPSWKKAIYKVICKLDSEVPEFFKSPNCLQEL 733
KD + SWKK+IYK+I ++D VPE+FKSPN L++L
Sbjct: 4404 KDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 4508
>ref|NM_079593.1| Drosophila melanogaster prospero (pros), mRNA
Length = 5635
Score = 212 bits (540), Expect = 1e-52
Identities = 97/155 (62%), Positives = 123/155 (78%)
Frame = +1
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYA 638
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFREFYYIQMEKYA
Sbjct: 4054 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFREFYYIQMEKYA 4233
Query: 639 RQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAG 698
RQA+ +G+ + ++L I D ELYR LN+HYN+ N EVP+ F V + TLREFF AI G
Sbjct: 4234 RQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEVPQNFRFVVESTLREFFRAIQGG 4413
Query: 699 KDVDPSWKKAIYKVICKLDSEVPEFFKSPNCLQEL 733
KD + SWKK+IYK+I ++D VPE+FKSPN L++L
Sbjct: 4414 KDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 4518
>emb|Z11743.1|DMPROSPER D. melanogaster prospero gene encoding divergent homeodomain protein
Length = 6017
Score = 212 bits (540), Expect = 1e-52
Identities = 97/155 (62%), Positives = 123/155 (78%)
Frame = +1
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYA 638
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFREFYYIQMEKYA
Sbjct: 4042 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFREFYYIQMEKYA 4221
Query: 639 RQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAG 698
RQA+ +G+ + ++L I D ELYR LN+HYN+ N EVP+ F V + TLREFF AI G
Sbjct: 4222 RQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEVPQNFRFVVESTLREFFRAIQGG 4401
Query: 699 KDVDPSWKKAIYKVICKLDSEVPEFFKSPNCLQEL 733
KD + SWKK+IYK+I ++D VPE+FKSPN L++L
Sbjct: 4402 KDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 4506
>gb|M81389.1|DROPROS D.melanogaster Pros protein (prospero) mRNA, complete cds
Length = 6422
Score = 212 bits (540), Expect = 1e-52
Identities = 97/155 (62%), Positives = 123/155 (78%)
Frame = +2
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYA 638
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFREFYYIQMEKYA
Sbjct: 4841 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFREFYYIQMEKYA 5020
Query: 639 RQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAG 698
RQA+ +G+ + ++L I D ELYR LN+HYN+ N EVP+ F V + TLREFF AI G
Sbjct: 5021 RQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEVPQNFRFVVESTLREFFRAIQGG 5200
Query: 699 KDVDPSWKKAIYKVICKLDSEVPEFFKSPNCLQEL 733
KD + SWKK+IYK+I ++D VPE+FKSPN L++L
Sbjct: 5201 KDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 5305
>ref|NM_066359.1| Caenorhabditis elegans
Length = 1761
Score = 212 bits (540), Expect = 1e-52
Identities = 97/178 (54%), Positives = 131/178 (73%)
Frame = +1
Query: 556 SECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCI 615
SECG Y G L+P HL+KAKLMFFYTRYP+SN+LK+YF D++FN+
Sbjct: 1249 SECG----------YEGGGSSSMLTPMHLRKAKLMFFYTRYPNSNLLKSYFPDIRFNKNN 1398
Query: 616 TSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYNKANDFE 675
T+QL+KWFSNFREFYY QMEK+ARQA+ +G+T ++ +++D EL++ LN HYN+ N +
Sbjct: 1399 TAQLVKWFSNFREFYYNQMEKFARQALAEGITDRNDIFVSKDSELFKVLNTHYNRNNHIK 1578
Query: 676 VPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEFFKSPNCLQEL 733
P+R + V Q TLREF +AI GKD++PSWKK IYKVI +L+ ++P+FFK PN L+ L
Sbjct: 1579 APDRLVFVVQETLREFHDAIKQGKDIEPSWKKTIYKVINRLEDQIPDFFKEPNFLERL 1752
>ref|XM_081366.1| prospero, mRNA
Length = 6820
Score = 212 bits (540), Expect = 1e-52
Identities = 97/155 (62%), Positives = 123/155 (78%)
Frame = +1
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYA 638
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFREFYYIQMEKYA
Sbjct: 4843 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFREFYYIQMEKYA 5022
Query: 639 RQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAG 698
RQA+ +G+ + ++L I D ELYR LN+HYN+ N EVP+ F V + TLREFF AI G
Sbjct: 5023 RQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEVPQNFRFVVESTLREFFRAIQGG 5202
Query: 699 KDVDPSWKKAIYKVICKLDSEVPEFFKSPNCLQEL 733
KD + SWKK+IYK+I ++D VPE+FKSPN L++L
Sbjct: 5203 KDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 5307
>gb|AC006530.4|AC006530 Homo sapiens chromosome 14 clone BAC 316E14 map 14q24.3, complete
sequence
Length = 203010
Score = 114 bits (286), Expect = 3e-23
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = -2
Query: 586 KAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDG 645
K ++ T + S+ + F V+FNRCITSQ+IKWFSNFREFYYIQMEK ARQAI+DG
Sbjct: 7466 KQTVLILSTSWQMSDWMDLLF--VQFNRCITSQMIKWFSNFREFYYIQMEKSARQAISDG 7293
Query: 646 VTSTEELSITRDCELYRALNMHYNKANDFEV 676
VT+ + L + R+ EL++ALNMHYNK NDFEV
Sbjct: 7292 VTNPKMLVVLRNSELFQALNMHYNKGNDFEV 7200
Score = 80.1 bits (196), Expect = 7e-13
Identities = 34/54 (62%), Positives = 45/54 (82%)
Frame = -3
Query: 673 DFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEFFKS 726
+ +VP+ FLE+A +TL+EFF A+ AG+D DPSWKK IYK+I KLDS++PE FKS
Sbjct: 5713 EMQVPDCFLEIASLTLQEFFRAVSAGRDSDPSWKKPIYKIISKLDSDIPEIFKS 5552
Score = 64.7 bits (156), Expect = 3e-08
Identities = 28/36 (77%), Positives = 33/36 (90%)
Frame = -1
Query: 575 MQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK 610
+QEGL+P HLKKAKLMFF+TRYPSSN+LK YF DV+
Sbjct: 8916 IQEGLNPGHLKKAKLMFFFTRYPSSNLLKVYFPDVQ 8809
Score = 51.6 bits (122), Expect = 3e-04
Identities = 61/265 (23%), Positives = 92/265 (34%), Gaps = 6/265 (2%)
Frame = -3
Query: 124 HQEDICSNSSRDSPPECL---SPFGR---PTMSQFDMDRLCDEHLRAKRARVENIIRGMS 177
H + C+ R S P L SPF P+ S D + DEH++AKRARVE I+RGM
Sbjct: 14188 HLAEACTEGERSSSPPELDRDSPFPWSQVPSSSPTDPEWFGDEHIQAKRARVETIVRGMC 14009
Query: 178 HSPSVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXX 237
SP+ + GN A VSPR + A
Sbjct: 14008 LSPNPLVPGN------AQAGVSPRCPKKARERKRKQNLPTPQGLLMPAPAWDQGNRKGGP 13847
Query: 238 XXXXXXXDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDN 297
+++QL H+QE Q D+ A+ G
Sbjct: 13846 RVREQLHLLKQQLRHLQEHILQAAKPRDT-------------------AQGPGGCGTGKG 13724
Query: 298 EMCELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELN 357
+ R + + + +K + P+ L E L++EL
Sbjct: 13723 PLSAKQGNGCGPRPWVVDGDHQQGTSKDLSGAEKHQESEKPSFLPSGAPASLEILRKELT 13544
Query: 358 TAMSQVVDTVVKVFSAKPSRQVPQV 382
A+SQ VD+V++ P + Q+
Sbjct: 13543 RAVSQAVDSVLQKVLLDPPGHLTQL 13469
>gb|U40760.1|FRU40760 Fugu rubripes prospero_like protein gene, partial cds
Length = 2162
Score = 105 bits (261), Expect = 2e-20
Identities = 50/82 (60%), Positives = 60/82 (72%), Gaps = 5/82 (6%)
Frame = +2
Query: 605 YFSDV-----KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 659
YF+D+ + RC+TSQLIKWFSNFREFYYIQMEK ARQA+ GVT L++ R+
Sbjct: 794 YFTDLFLVRPQLTRCVTSQLIKWFSNFREFYYIQMEKSARQAVAQGVTDVRSLAVERESG 973
Query: 660 LYRALNMHYNKANDFEVPERFL 681
L+RALN HYNKANDF+V L
Sbjct: 974 LFRALNTHYNKANDFQVTRALL 1039
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/39 (76%), Positives = 35/39 (88%)
Frame = +3
Query: 675 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVI 713
+VP+RFLEVA ITLREF++AI G+D DPSWKKAIYKVI
Sbjct: 2046 QVPQRFLEVAAITLREFYSAISTGEDRDPSWKKAIYKVI 2162
Score = 57.0 bits (136), Expect = 7e-06
Identities = 26/34 (76%), Positives = 29/34 (84%)
Frame = +1
Query: 577 EGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK 610
EGL+ NHLKKAKLMFFYTRYPSS +LK F DV+
Sbjct: 553 EGLTTNHLKKAKLMFFYTRYPSSQVLKACFHDVQ 654
>gb|L14331.1| Caenorhabditis elegans cosmid K12H4, complete sequence
Length = 38582
Score = 88.2 bits (217), Expect = 3e-15
Identities = 41/72 (56%), Positives = 51/72 (69%)
Frame = +3
Query: 556 SECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCI 615
SECG Y G L+P HL+KAKLMFFYTRYP+SN+LK+YF D++FN+
Sbjct: 27816 SECG----------YEGGGSSSMLTPMHLRKAKLMFFYTRYPNSNLLKSYFPDIRFNKNN 27965
Query: 616 TSQLIKWFSNFR 627
T+QL+KWFSNFR
Sbjct: 27966 TAQLVKWFSNFR 28001
Score = 66.2 bits (160), Expect = 1e-08
Identities = 30/59 (50%), Positives = 44/59 (73%)
Frame = +2
Query: 626 FREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVA 684
FREFYY QMEK+ARQA+ +G+T ++ +++D EL++ LN HYN+ N +V RFL V+
Sbjct: 28412 FREFYYNQMEKFARQALAEGITDRNDIFVSKDSELFKVLNTHYNRNNHIKV--RFLFVS 28582
Score = 52.4 bits (124), Expect = 2e-04
Identities = 23/40 (57%), Positives = 30/40 (74%)
Frame = +3
Query: 673 DFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKV 712
+ + P+R + V Q TLREF +AI GKD++PSWKK IYKV
Sbjct: 28599 NLQAPDRLVFVVQETLREFHDAIKQGKDIEPSWKKTIYKV 28718
>gb|AC008358.4|AC008358 Drosophila melanogaster, chromosome 3R, region 86E-86E, BAC clone
BACR48B07, complete sequence
Length = 170307
Score = 77.8 bits (190), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +3
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFR 627
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFR
Sbjct: 150726 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFR 150872
Score = 77.0 bits (188), Expect = 6e-12
Identities = 34/59 (57%), Positives = 45/59 (75%)
Frame = +2
Query: 675 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEFFKSPNCLQEL 733
+VP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE+FKSPN L++L
Sbjct: 164597 QVPQNFRFVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 164773
Score = 74.7 bits (182), Expect = 3e-11
Identities = 36/67 (53%), Positives = 45/67 (66%)
Frame = +1
Query: 610 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 669
K NR +T I REFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN
Sbjct: 164158 KPNRILTKPNIPHLRICREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYN 164337
Query: 670 KANDFEV 676
+ N EV
Sbjct: 164338 RNNHIEV 164358
>gb|AF190403.1|AF190403 Drosophila melanogaster homeodomain transcription factor Prospero
(pros) gene, complete cds
Length = 9907
Score = 77.8 bits (190), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +1
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFR 627
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFR
Sbjct: 4960 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFR 5106
Score = 77.0 bits (188), Expect = 6e-12
Identities = 34/59 (57%), Positives = 45/59 (75%)
Frame = +3
Query: 675 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEFFKSPNCLQEL 733
+VP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE+FKSPN L++L
Sbjct: 9714 QVPQNFRFVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 9890
Score = 74.7 bits (182), Expect = 3e-11
Identities = 36/67 (53%), Positives = 45/67 (66%)
Frame = +2
Query: 610 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 669
K NR +T I REFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN
Sbjct: 9281 KPNRILTKPNIPHLRICREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYN 9460
Query: 670 KANDFEV 676
+ N EV
Sbjct: 9461 RNNHIEV 9481
>gb|AE003691.2|AE003691 Drosophila melanogaster genomic scaffold 142000013386035 section 16 of
105, complete sequence
Length = 226773
Score = 77.8 bits (190), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +2
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFR 627
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFR
Sbjct: 81302 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFR 81448
Score = 77.0 bits (188), Expect = 6e-12
Identities = 34/59 (57%), Positives = 45/59 (75%)
Frame = +1
Query: 675 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEFFKSPNCLQEL 733
+VP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE+FKSPN L++L
Sbjct: 95332 QVPQNFRFVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 95508
Score = 74.7 bits (182), Expect = 3e-11
Identities = 36/67 (53%), Positives = 45/67 (66%)
Frame = +3
Query: 610 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 669
K NR +T I REFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN
Sbjct: 94893 KPNRILTKPNIPHLRICREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYN 95072
Query: 670 KANDFEV 676
+ N EV
Sbjct: 95073 RNNHIEV 95093
>gb|AF190405.1|AF190405 Drosophila virilis homeodomain transcription factor Prospero (pros)
gene, complete cds
Length = 11422
Score = 77.8 bits (190), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +1
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFR 627
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFR
Sbjct: 5698 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFR 5844
Score = 76.6 bits (187), Expect = 8e-12
Identities = 34/59 (57%), Positives = 45/59 (75%)
Frame = +2
Query: 675 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEFFKSPNCLQEL 733
+VP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE+FKSPN L++L
Sbjct: 11240 QVPQNFRFVVEQTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 11416
Score = 71.6 bits (174), Expect = 3e-10
Identities = 31/54 (57%), Positives = 40/54 (73%)
Frame = +1
Query: 623 FSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEV 676
+ REFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN+ N EV
Sbjct: 10666 YQRCREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEV 10827
>gb|AC007710.11|AC007710 Drosophila melanogaster, chromosome 3R, region 86E-86E, BAC clone
BACR05C15, complete sequence
Length = 174426
Score = 77.8 bits (190), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +3
Query: 579 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFR 627
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFR
Sbjct: 101247 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFR 101393
Score = 77.0 bits (188), Expect = 6e-12
Identities = 34/59 (57%), Positives = 45/59 (75%)
Frame = +2
Query: 675 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEFFKSPNCLQEL 733
+VP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE+FKSPN L++L
Sbjct: 115118 QVPQNFRFVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 115294
Score = 74.7 bits (182), Expect = 3e-11
Identities = 36/67 (53%), Positives = 45/67 (66%)
Frame = +1
Query: 610 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 669
K NR +T I REFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN
Sbjct: 114679 KPNRILTKPNIPHLRICREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYN 114858
Query: 670 KANDFEV 676
+ N EV
Sbjct: 114859 RNNHIEV 114879
>gb|AC007709.4|AC007709 Drosophila melanogaster, chromosome 3R, region 86E-86E, BAC clone
BACR13P08, complete sequence
Length = 169707
Score = 77.0 bits (188), Expect = 6e-12
Identities = 34/59 (57%), Positives = 45/59 (75%)
Frame = +3
Query: 675 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEFFKSPNCLQEL 733
+VP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE+FKSPN L++L
Sbjct: 11442 QVPQNFRFVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 11618
Score = 74.7 bits (182), Expect = 3e-11
Identities = 36/67 (53%), Positives = 45/67 (66%)
Frame = +2
Query: 610 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 669
K NR +T I REFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN
Sbjct: 11003 KPNRILTKPNIPHLRICREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYN 11182
Query: 670 KANDFEV 676
+ N EV
Sbjct: 11183 RNNHIEV 11203
>ref|XM_063419.1| Homo sapiens similar to homeobox prospero-like protein (LOC122958),
mRNA
Length = 1326
Score = 51.6 bits (122), Expect = 3e-04
Identities = 61/265 (23%), Positives = 92/265 (34%), Gaps = 6/265 (2%)
Frame = +1
Query: 124 HQEDICSNSSRDSPPECL---SPFGR---PTMSQFDMDRLCDEHLRAKRARVENIIRGMS 177
H + C+ R S P L SPF P+ S D + DEH++AKRARVE I+RGM
Sbjct: 49 HLAEACTEGERSSSPPELDRDSPFPWSQVPSSSPTDPEWFGDEHIQAKRARVETIVRGMC 228
Query: 178 HSPSVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXX 237
SP+ + GN A VSPR + A
Sbjct: 229 LSPNPLVPGN------AQAGVSPRCPKKARERKRKQNLPTPQGLLMPAPAWDQGNRKGGP 390
Query: 238 XXXXXXXDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDN 297
+++QL H+QE Q D+ A+ G
Sbjct: 391 RVREQLHLLKQQLRHLQEHILQAAKPRDT-------------------AQGPGGCGTGKG 513
Query: 298 EMCELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELN 357
+ R + + + +K + P+ L E L++EL
Sbjct: 514 PLSAKQGNGCGPRPWVVDGDHQQGTSKDLSGAEKHQESEKPSFLPSGAPASLEILRKELT 693
Query: 358 TAMSQVVDTVVKVFSAKPSRQVPQV 382
A+SQ VD+V++ P + Q+
Sbjct: 694 RAVSQAVDSVLQKVLLDPPGHLTQL 768
>dbj|AK006828.1|AK006828 Mus musculus adult male testis cDNA, RIKEN full-length enriched
library, clone:1700058C01:homolog to SIMILARITY BY
BLASTN TO AF063018, full insert sequence
Length = 1616
Score = 46.6 bits (109), Expect = 0.009
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +2
Query: 147 PTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSPSVALRGNENEREMAPQSVSPRE 202
P+ S + D DEH++AK+ARVE I+RGM SPS ++ G E P+ R+
Sbjct: 350 PSSSLTEADWFWDEHIQAKKARVETIVRGMCLSPSSSVSGRHKESLRCPEKGRERK 517
>gb|AY040548.1| Ateles belzebuth chamek prospero-related homeobox 1 (PROX1) gene,
partial cds
Length = 162
Score = 46.2 bits (108), Expect = 0.012
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 545 TAEGLSLSLIKSECGDLQDMSE 566
TAEGLSLSLIKSECGDLQDMSE
Sbjct: 95 TAEGLSLSLIKSECGDLQDMSE 160
>emb|AJ299062.1|CAR299062 Cicer arietinum partial mRNA for hypothetical protein (ORF1), clone
Can183
Length = 1041
Score = 39.3 bits (90), Expect = 1.5
Identities = 40/146 (27%), Positives = 57/146 (38%), Gaps = 18/146 (12%)
Frame = +2
Query: 255 EKFYQIYDSTD--SENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMCELDPGQFID--- 309
+ F ++D TD ++DED + ++ + D A S G DN + E DP F
Sbjct: 62 DDFDDLHDGTDVDEDDDEDDDNEDEYENEDAFDVHAHASAGEHDNPIIEFDPELFSSDEA 241
Query: 310 RARAL--IREQEMAENKPKREGNN-----------KERDHGPNSLQPEGKHLAETLKQEL 356
ARAL E+EMA G N +HG NS + L E
Sbjct: 242 YARALQEAEEREMAARLLALAGINDLSFSITEETEDMEEHGANSQDAWEDVDPDELSYEE 421
Query: 357 NTAMSQVVDTVVKVFSAKPSRQVPQV 382
A+ +VV T + S +P V
Sbjct: 422 LLALGEVVGTESRGLSTDTIACLPSV 499
>emb|AL646069.1|AL646069 Ralstonia solanacearum GMI1000 chromosome, complete sequence; segment
13/19
Length = 189050
Score = 37.0 bits (84), Expect = 7.2
Identities = 34/93 (36%), Positives = 43/93 (45%), Gaps = 2/93 (2%)
Frame = +2
Query: 416 IIPNPLDTFGNVQMASSTD--QTEALPLVVRKNSSDQSASGLVGGHHQPLHQSPLSATTG 473
I P P + F NV M S D + L V+ QSA+ LV G PL SA
Sbjct: 75587 IPPPPCELFENV-MPSMRDGLHRKLLEYVL------QSAALLVSGVQMPLAVQFGSACRP 75745
Query: 474 FTTSTFRHPFPLPLMAYPFQSPLGAPSGSFSGK 506
F +T R PFP +MA P +P+ S S S +
Sbjct: 75746 FAPATSRTPFPSTVMAAPSYAPISVGSISSSAR 75844
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 21, 2002 12:37 AM
Number of letters in database: 601,717,568
Number of sequences in database: 1,165,784
Lambda K H
0.315 0.130 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,406,199,308
Number of Sequences: 1165784
Number of extensions: 47733943
Number of successful extensions: 276237
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 47471
Number of HSP's successfully gapped in prelim test: 11740
Number of HSP's that attempted gapping in prelim test: 176902
Number of HSP's gapped (non-prelim): 161304
length of query: 736
length of database: 1,632,228,288
effective HSP length: 143
effective length of query: 593
effective length of database: 1,465,521,176
effective search space: 869054057368
effective search space used: 869054057368
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 83 (36.6 bits)