TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(232 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,168,056 sequences; 626,783,262 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_031944.1| Homo sapiens Mix-like homeobox protein 1 (... 294 4e-78
gb|AF211891.1|AF211891 Homo sapiens Mix.1 homeobox-like pro... 294 4e-78
ref|XM_037300.5| Homo sapiens Mix-like homeobox protein 1 (... 273 8e-72
gb|AF154573.1|AF154573 Mus musculus homeobox protein MIX (M... 225 2e-57
ref|NM_013729.1| Mus musculus Mix1 homeobox-like 1 (Xenopus... 225 2e-57
gb|AF135063.1|AF135063 Mus musculus Mix-like homeobox prote... 225 2e-57
gb|AF201959.1|AF201959 Mus musculus Mix-related homeobox pr... 216 1e-54
gb|AF218357.1|AF218357 Homo sapiens homeodomain protein MIX... 189 2e-46
gb|U34615.1|GGU34615 Gallus gallus homeobox protein CMIX mR... 97 1e-18
emb|AJ004903.1|GGJ004903 Gallus gallus mRNA for CMIX homeob... 94 1e-17
ref|NM_130940.1| Danio rerio mixer (mix), mRNA 90 1e-16
gb|AF121771.1|AF121771 Danio rerio homeodomain transcriptio... 90 1e-16
gb|AF411465.1|AF411465 Petromyzon marinus transcription fac... 85 4e-15
gb|AF014369.1|AF014369 Danio rerio transcription factor PAX... 84 7e-15
emb|Z35141.1|HSPAX7GE H.sapiens Pax-7 gene for transcriptio... 84 7e-15
dbj|D87838.1|D87838 Gallus gallus mRNA for PAX7 protein, co... 84 7e-15
ref|NM_013945.1| Homo sapiens paired box gene 7 (PAX7), tra... 84 7e-15
ref|NM_008781.1| Mus musculus paired box gene 3 (Pax3), mRNA 84 7e-15
emb|X59358.1|MMPAX3R Mouse Pax-3 gene for a DNA binding pro... 84 7e-15
gb|AF014368.1|AF014368 Danio rerio transcription factor PAX... 84 7e-15
gb|AF000673.1|AF000673 Coturnix coturnix paired-box transcr... 84 7e-15
dbj|AK014337.1|AK014337 Mus musculus 14, 17 days embryo hea... 84 7e-15
gb|U02368.1|HSU02368 Human PAX3/forkhead transcription fact... 84 7e-15
gb|BC008826.1|BC008826 Homo sapiens, paired box gene 3 (Waa... 84 7e-15
gb|L07483.1|HUMPBH3B Homo sapiens paired-box protein (PAX3)... 84 7e-15
gb|M27063.1|XELMIX1HB Xenopus laevis homeobox protein (Mix.... 84 7e-15
gb|AF178854.1|AF178854 Synthetic construct Pax3-forkhead fu... 84 7e-15
ref|NM_002584.1| Homo sapiens paired box gene 7 (PAX7), tra... 84 7e-15
emb|X96743.1|HSPAX7M H.sapiens mRNA for paired box containi... 84 7e-15
gb|AF014370.1|AF014370 Danio rerio transcription factor PAX... 84 7e-15
gb|AF254422.2|AF254422 Mus musculus paired box transcriptio... 84 7e-15
gb|U50745.1|XLU50745 Xenopus laevis homeobox protein Mix.2 ... 83 2e-14
gb|U20792.1|MMU20792 Mus musculus Pax7 mRNA, partial cds 83 2e-14
gb|AC007582.7| Drosophila melanogaster, chromosome 2R, regi... 82 3e-14
gb|AY071593.1| Drosophila melanogaster RE64348 full length ... 82 3e-14
gb|AE003466.1|AE003466 Drosophila melanogaster genomic scaf... 82 3e-14
dbj|AB066289.1|AB066289 Leucopsarion petersii otx1 gene for... 82 3e-14
gb|AF165886.1|AF165886 Branchiostoma floridae paired-box tr... 82 3e-14
dbj|AK012493.1|AK012493 Mus musculus 11 days embryo whole b... 82 4e-14
ref|NM_131277.1| Danio rerio paired box gene 3 (pax3), mRNA 82 4e-14
gb|AF014366.1|AF014366 Danio rerio transcription factor PAX... 82 4e-14
gb|AF043740.1|AF043740 Branchiostoma floridae amphioxus Otx... 82 4e-14
emb|AJ251846.1|XLA251846 Xenopus laevis mRNA for OTX5b prot... 81 6e-14
dbj|AB034702.1|AB034702 Xenopus laevis Xotx5 mRNA, complete... 81 6e-14
gb|AY040535.1| Schistocerca americana pairberry 1 transcrip... 81 6e-14
gb|AY036005.1| Danio rerio orthodenticle-related homeobox 5... 81 6e-14
dbj|D26172.1|ZEFOTX1 Zebrafish otx1 mRNA for otx homeoprote... 81 8e-14
gb|U02308.1|HSU02308 Human PAX-3-FKHR gene fusion mRNA, par... 81 8e-14
gb|AF461039.1|AF461039 Mus musculus paired-type homeobox At... 81 8e-14
ref|NM_130865.1| Mus musculus diencephalon/mesencephalon-ex... 81 8e-14
gb|AF463513.1|AF463513 Mus musculus cerebellar-diencephalic... 81 8e-14
gb|AF421857.1| Mus musculus paired-like homeobox protein DM... 81 8e-14
gb|AY040861.1| Scyliorhinus canicula homeobox protein Otx5 ... 81 8e-14
ref|NM_131250.1| Danio rerio orthodenticle homolog 1 (otx1)... 81 8e-14
gb|U14591.1|DRU14591 Danio rerio orthodenticle-related prot... 81 8e-14
ref|XM_060436.2| Homo sapiens similar to dJ1109J22.1 (novel... 81 8e-14
gb|AF461038.1|AF461038 Gallus gallus paired-type homeobox A... 81 8e-14
gb|U02309.1|HSU02309 Human PAX-3 mRNA, partial cds 81 8e-14
gb|AF421858.1| Mus musculus paired-like homeobox protein DM... 81 8e-14
dbj|AB012299.1|AB012299 Lampetra japonica mRNA for LjOtxA, ... 80 1e-13
gb|AF005999.1|AF005999 Xenopus laevis homeobox protein (mil... 80 1e-13
ref|XM_049268.1| Homo sapiens similar to HOMEOBOX PROTEIN O... 80 1e-13
gb|BC007621.1|BC007621 Homo sapiens, Similar to Orthodentic... 80 1e-13
dbj|AB012300.1|AB012300 Lampetra japonica mRNA for LjOtxB, ... 80 2e-13
ref|NM_013109.1| Rattus norvegicus Orthodenticle (Drosophi... 80 2e-13
gb|L32602.1|RATOTX1X Rattus norvegicus OTX1 mRNA, complete cds 80 2e-13
emb|AJ278856.1|PDU78856 Platynereis dumerilii mRNA for Otx ... 79 2e-13
ref|NM_131215.1| Danio rerio orthodenticle homolog 3 (otx3)... 79 2e-13
dbj|D26174.1|ZEFOTX3 Zebrafish otx3 mRNA for otx homeoprote... 79 2e-13
gb|AF081948.1|AF081948 Girardia tigrina homeobox protein (O... 79 2e-13
dbj|AB061768.1|AB061768 Hemicentrotus pulcherrimus HpOtxL m... 79 2e-13
dbj|AB011526.1|AB011526 Hemicentrotus pulcherrimus early ty... 79 2e-13
dbj|D84254.1|D84254 Halocynthia roretzi mRNA for Pax-37, co... 79 2e-13
gb|S76899.1|S76899 SpOtx=orthodenticle-related protein [Str... 79 2e-13
gb|AY040536.1| Schistocerca americana pairberry 2 transcrip... 79 3e-13
gb|AF232676.1|AF232676 Sus scrofa prophet of pit-1 (Prop-1)... 79 3e-13
ref|NM_006261.1| Homo sapiens prophet of Pit1, paired-like ... 79 3e-13
gb|AF076215.1|AF076215 Homo sapiens prophet of Pit1 (PROP1)... 79 3e-13
gb|L26509.1|XELORTHOAA Xenopus laevis orthodenticle-A like ... 79 3e-13
gb|M14941.1|DROPRD41 D.melanogaster PRD mRNA clone BSH4, ho... 79 4e-13
emb|Z46972.1|XLOTXNUC X.laevis mRNA for homeobox protein 79 4e-13
gb|AF129932.1|AF129932 Herdmania curvata homeobox protein O... 79 4e-13
emb|AJ223627.1|TCAJ3627 Tribolium castaneum mRNA for orthod... 79 4e-13
gb|AY029294.1| Xenopus laevis transcription factor Otx1 (Ot... 79 4e-13
dbj|D84062.1|D84062 Halocynthia roretzi mRNA for otx/orthod... 79 4e-13
emb|X68883.1|MMOTX1 M.musculus Otx1 mRNA 79 4e-13
gb|U19813.1|XLXOTX2S1 Xenopus laevis homeobox protein ortho... 79 4e-13
ref|NM_131251.1| Danio rerio orthodenticle homolog 2 (otx2)... 78 5e-13
gb|U14592.1|DRU14592 Danio rerio orthodenticle-related prot... 78 5e-13
ref|NM_075472.1| Caenorhabditis elegans 78 5e-13
gb|BC017609.1|BC017609 Mus musculus, clone MGC:27657 IMAGE:... 78 5e-13
ref|NM_075473.1| Caenorhabditis elegans 78 5e-13
ref|NM_021728.1| Homo sapiens orthodenticle homolog 2 (Dros... 78 5e-13
gb|AF305499.1|AF305499 Ciona intestinalis Otx mRNA, complet... 78 5e-13
dbj|AB057732.1|AB057732 Ciona savignyi Cs-OTX mRNA, complet... 78 5e-13
gb|AF381629.1|AF381629 Caenorhabditis elegans homeodomain p... 78 5e-13
gb|AF381627.1|AF381627 Caenorhabditis elegans clone yk345e3... 78 5e-13
emb|AJ000939.1|OLJ000939 Oryzias latipes, Otx2 gene 78 5e-13
dbj|D26173.1|ZEFOTX2 Zebrafish otx2 mRNA for otx homeoprote... 78 5e-13
emb|X68884.1|MMOTX2 M.musculus Otx2 mRNA 78 5e-13
gb|AF381628.1|AF381628 Caenorhabditis elegans clone yk51g10... 78 5e-13
ref|NM_059845.1| homeobox protein (otd subfamily) 78 5e-13
ref|NM_078536.1| Drosophila melanogaster ocelliless (oc), mRNA 78 6e-13
gb|AF099746.1|AF099746 Petromyzon marinus Otx mRNA, complet... 78 6e-13
emb|X58983.1|DMOTD D.melanogaster otd gene for orthodenticl... 78 6e-13
emb|AJ223614.1|TRC223614 Tribolium castaneum mRNA for ortho... 78 6e-13
gb|AF081350.1|AF081350 Xenopus laevis homeodomain protein M... 78 6e-13
dbj|AB028220.1|AB028220 Ptychodera flava mRNA for Pf-Otx, c... 78 6e-13
gb|AF068263.1|AF068263 Xenopus laevis Mix-like endodermal r... 78 6e-13
ref|NM_077459.1| homeobox protein (otd subfamily) 77 1e-12
dbj|AB041043.1|AB041043 Stichopus japonicus Sj-Otx mRNA for... 77 1e-12
gb|AF079560.1|AF079560 Xenopus laevis homeobox protein BIX2... 77 1e-12
ref|NM_131304.1| Danio rerio paired box gene 6a (pax6a), mRNA 77 1e-12
emb|X63183.1|BRPAX6 B.rerio pax-6 mRNA 77 1e-12
gb|U76386.1|XLU76386 Xenopus laevis paired-type homeodomain... 77 1e-12
gb|S69508.1|S69508 Pax-6=transcription factor [chickens, em... 77 1e-12
gb|U77532.1|XLU77532 Xenopus laevis Pax6 mRNA, complete cds 77 1e-12
gb|AF154555.1|AF154555 Xenopus laevis paired domain transcr... 77 1e-12
emb|Y07547.1|AFPAX6C72 Astyanax fasciatus mRNA for PAX-6 pr... 77 1e-12
dbj|AB002408.1|AB002408 Oryzias sp. mRNA for mdkPax-6, part... 77 1e-12
emb|X61389.1|BRPAXZFA B.rerio mRNA for Pax[zf-a] 77 1e-12
gb|AF079559.1|AF079559 Xenopus laevis homeobox protein BIX1... 77 1e-12
emb|AJ000938.1|OLJ000938 Oryzias latipes, Pax6 gene 77 1e-12
gb|AY047583.1| Homo sapiens paired box protein PAX6 (PAX6) ... 77 1e-12
gb|AY064175.1| Mus musculus Pax6 paired-less isoform mRNA, ... 77 1e-12
emb|Y07546.1|AFPAX6C23 Astyanax fasciatus mRNA for PAX-6 pr... 77 1e-12
gb|AF154552.1|AF154552 Xenopus laevis paired domain transcr... 77 1e-12
ref|NM_013627.1| Mus musculus paired box gene 6 (Pax6), mRNA 77 1e-12
ref|NM_021855.1| Rattus norvegicus cone-rod homeobox protei... 77 1e-12
gb|AF135838.1|AF135838 Rattus norvegicus homeodomain protei... 77 1e-12
emb|X63963.1|MMPAX6PBP M.musculus pax-6 mRNA for paired box... 77 1e-12
dbj|AB021129.1|AB021129 Rattus norvegicus Crx mRNA for cone... 77 1e-12
emb|AJ223440.1|BFL223440 Branchiostoma floridae Pax6 gene (... 77 1e-12
gb|BC011272.1|BC011272 Mus musculus, clone MGC:18454 IMAGE:... 77 1e-12
ref|NM_001604.2| Homo sapiens paired box gene 6 (aniridia, ... 77 1e-12
ref|NM_131641.1| Danio rerio paired box gene 6b (pax6b), mRNA 77 1e-12
gb|AF061252.1|AF061252 Danio rerio Pax-family transcription... 77 1e-12
gb|U64513.1|XLU64513 Xenopus laevis Xpax6 mRNA, complete cds 77 1e-12
gb|AF443223.1|AF443223 Mus musculus PAX6 mRNA, partial cds,... 77 1e-12
gb|AF081351.1|AF081351 Xenopus laevis homeodomain protein M... 77 1e-12
gb|S74393.1|S74393 Pax-6 [rats, small eye rSey, mRNA Partia... 77 1e-12
gb|U77178.1|TAU77178 Triturus alpestris paired box homeodom... 77 1e-12
gb|AF154553.1|AF154553 Xenopus laevis paired domain transcr... 77 1e-12
gb|AF154554.1|AF154554 Xenopus laevis paired domain transcr... 77 1e-12
emb|X70475.1|CCPAX C. coturnix mRNA for paired box and home... 77 1e-12
emb|AJ292077.1|MMU292077 Mus musculus partial mRNA for pair... 77 1e-12
emb|Y07548.1|AFPAX6E24 Astyanax fasciatus mRNA for PAX-6 pr... 77 1e-12
dbj|AB066290.1|AB066290 Leucopsarion petersii otx3 gene for... 77 1e-12
gb|AF154557.1|AF154557 Xenopus laevis paired domain transcr... 77 1e-12
gb|AF457141.1|AF457141 Mus musculus Pax6 paired-less isofor... 77 1e-12
gb|U67887.1|XLU67887 Xenopus laevis XLPAX6 (Pax6) mRNA, com... 77 1e-12
gb|M77844.1|HUMOCLHMB H.sapiens oculorhombin (aniridia) mRN... 77 1e-12
emb|AJ307468.1|MMU307468 Mus musculus mRNA for paired box p... 77 1e-12
emb|Y19199.1|MMUY19199 Mus musculus partial Pax-6 gene for ... 77 1e-12
emb|Y19198.1|MMUY19198 Mus musculus partial Pax-6 gene for ... 77 1e-12
emb|Y19197.1|MMUY19197 Mus musculus partial Pax-6 gene for ... 77 1e-12
emb|Y19195.1|MMUY19195 Mus musculus partial Pax-6 gene for ... 77 1e-12
gb|AF169414.1|AF169414 Ambystoma mexicanum paired-box trans... 77 1e-12
dbj|D87837.1|D87837 Gallus gallus mRNA for PAX6 protein, co... 77 1e-12
emb|AJ223441.1|BFL223441 Branchiostoma floridae Pax6 gene (... 77 1e-12
ref|NM_013001.1| Rattus norvegicus Paired box homeotic gene... 77 1e-12
gb|AF169412.1|AF169412 Ambystoma mexicanum paired-box trans... 77 1e-12
gb|U69644.1|RNU69644 Rattus norvegicus Pax-6 mRNA, comlete cds 77 1e-12
gb|AF154556.1|AF154556 Xenopus laevis paired domain transcr... 77 1e-12
ref|NM_000280.1| Homo sapiens paired box gene 6 (aniridia, ... 77 1e-12
gb|M93650.1|HUMPAX6AN Human paired box gene (PAX6) homologu... 77 1e-12
dbj|D88741.1|D88741 Cynops pyrrhogaster mRNA for PAX6 LL, P... 77 1e-12
emb|AJ223444.1|BFL223444 Branchiostoma floridae Pax6 gene (... 77 1e-12
gb|AF169413.1|AF169413 Ambystoma mexicanum paired-box trans... 77 1e-12
gb|BC011953.1|BC011953 Homo sapiens, Similar to paired box ... 77 1e-12
gb|AF169415.1|AF169415 Ambystoma mexicanum paired-box trans... 77 1e-12
gb|M77842.1|MUSSEYA Mus musculus oculorhombin (Sey) mRNA, c... 77 1e-12
emb|AJ223442.1|BFL223442 Branchiostoma floridae Pax6 gene (... 77 1e-12
ref|NM_016307.2| Homo sapiens paired related homeobox prote... 76 2e-12
gb|AF061970.1|AF061970 Homo sapiens paired related homeobox... 76 2e-12
dbj|AK018615.1|AK018615 Mus musculus adult male cecum cDNA,... 76 2e-12
dbj|AK025181.1|AK025181 Homo sapiens cDNA: FLJ21528 fis, cl... 76 2e-12
gb|AF079562.1|AF079562 Xenopus laevis homeobox protein BIX4... 76 2e-12
gb|BC016502.1|BC016502 Mus musculus, cone-rod homeobox cont... 76 2e-12
ref|XM_038589.1| Homo sapiens similar to Homeobox domain co... 76 2e-12
ref|NM_000554.1| Homo sapiens cone-rod homeobox (CRX), mRNA 76 2e-12
ref|NM_007770.1| Mus musculus cone-rod homeobox containing ... 76 2e-12
gb|BC016664.1|BC016664 Homo sapiens, cone-rod homeobox, clo... 76 2e-12
gb|BC014645.1|BC014645 Homo sapiens, Similar to paired rela... 76 2e-12
gb|U77615.1|MMU77615 Mus musculus homeodomain protein (crx)... 76 2e-12
gb|AF024711.1|AF024711 Homo sapiens cone rod homeobox prote... 76 2e-12
ref|NM_009116.1| Mus musculus paired related homeobox 2 (Pr... 76 2e-12
emb|X52875.1|MMHOMEOS8 Mouse homeobox gene Prx2 mRNA 76 2e-12
gb|AF154123.1|AF154123 Bos taurus cone-rod homeobox mRNA, c... 76 2e-12
emb|Y19196.1|MMUY19196 Mus musculus partial Pax-6 gene for ... 76 2e-12
dbj|AK019971.1|AK019971 Mus musculus 8 days embryo whole bo... 76 2e-12
gb|U81600.1|HSU81600 Homo sapiens paired-like homeodomain p... 76 2e-12
emb|Y09975.1|PMPAX6 P.mammillata mRNA for Pax-6 76 2e-12
emb|X79695.1|GGPRX2 G.gallus Prx-2 (S8) mRNA 76 2e-12
gb|AC011066.5|AC011066 Drosophila melanogaster, chromosome ... 76 2e-12
ref|NM_078832.1| Drosophila melanogaster paired (prd), mRNA 76 2e-12
gb|AY059447.1| Drosophila melanogaster GH22686 full length ... 76 2e-12
gb|M14548.1|DROPRD D.melanogaster paired gene (prd) encodin... 76 2e-12
ref|NM_008936.1| Mus musculus paired like homeodomain facto... 76 2e-12
gb|U77946.1|MMU77946 Mus musculus pituitary specific homeod... 76 2e-12
gb|AE003634.1|AE003634 Drosophila melanogaster genomic scaf... 76 2e-12
dbj|AK008428.1|AK008428 Mus musculus adult male small intes... 75 3e-12
ref|NM_011127.1| Mus musculus paired related homeobox 1 (Pr... 75 3e-12
emb|X59725.1|MMHOBOXG M.musculus mRNA for homeobox gene 75 3e-12
dbj|D88738.1|D88738 African clawed frog mRNA for Xenopus Pa... 75 3e-12
gb|M95929.1|HUMPHOX1A Human homeobox protein (PHOX1) mRNA, ... 75 3e-12
dbj|D88737.1|D88737 African clawed frog mRNA for Xenopus Pa... 75 3e-12
dbj|AB008834.1|AB008834 Dugesia japonica DjotxA mRNA, compl... 75 3e-12
gb|AF160992.1|AF160992 Podocoryne carnea (jellyfish) homeod... 75 3e-12
gb|S82911.1|S82911 rHox=rHox protein [rats, ROS 17/2.8 oste... 75 3e-12
dbj|AK019503.1|AK019503 Mus musculus 0 day neonate skin cDN... 75 3e-12
dbj|D13433.1|CHKPRX1 Gallus gallus paired-related homeobox ... 75 3e-12
gb|L06502.1|MUSMHOX Mus musculus MHox protein mRNA, complet... 75 3e-12
dbj|AB061220.1|AB061220 Lampetra japonica mRNA for paired b... 75 3e-12
gb|S69088.1|S69088 gMHox=homeobox [chickens, stage 17 embry... 75 3e-12
ref|NM_079139.1| Drosophila melanogaster gooseberry (gsb), ... 75 3e-12
ref|NM_006902.2| Homo sapiens paired mesoderm homeo box 1 (... 75 3e-12
gb|U03873.1|MMU03873 Mus musculus homeobox (Pmx) mRNA, comp... 75 3e-12
gb|AF461698.1|AF461698 Gallus gallus paired-related homeobo... 75 3e-12
ref|NM_022716.1| Homo sapiens paired mesoderm homeo box 1 (... 75 3e-12
gb|M14942.1|DROPRD92 D.melanogaster paired mRNA clone BSH9,... 75 4e-12
ref|NM_008759.1| Mus musculus OG9 homeobox gene (Og9x), mRNA 75 4e-12
emb|AJ223443.1|BFL223443 Branchiostoma floridae Pax6 gene (... 75 4e-12
gb|U14621.1|PLU14621 Paracentrotus lividus Pax-6 (suPax-6) ... 75 5e-12
ref|XM_002147.4| Homo sapiens aristaless-like homeobox 3 (A... 74 7e-12
ref|NM_007441.1| Mus musculus aristaless 3 (Alx3), mRNA 74 7e-12
gb|U96109.1|MMU96109 Mus musculus proline-rich transcriptio... 74 7e-12
ref|NM_006982.1| Homo sapiens cartilage paired-class homeop... 74 7e-12
gb|U31986.1|HSU31986 Human cartilage-specific homeodomain p... 74 7e-12
ref|NM_006492.1| Homo sapiens aristaless-like homeobox 3 (A... 74 7e-12
gb|AF008203.1|AF008203 Homo sapiens homeobox protein (Alx3)... 74 7e-12
ref|NM_012921.1| Rattus norvegicus Cartilage homeo protein ... 74 7e-12
gb|U59830.1|LOU59830 Loligo opalescens Pax-6 mRNA, complete... 74 7e-12
gb|L14018.1|RATCART1X Rat cartilage homeoprotein 1 (Cart-1)... 74 7e-12
emb|X81403.1|MAALX3 M.auratus mRNA for alx3 74 7e-12
gb|U15276.1|XLU15276 Xenopus laevis cartilage homeoprotein ... 74 7e-12
gb|BC010923.1|BC010923 Homo sapiens, Similar to cartilage p... 74 7e-12
gb|AY028904.1| Girardia tigrina Pax6A mRNA, partial cds 74 9e-12
emb|AJ404888.1|HSA404888 Homo sapiens mRNA for homeodomain ... 74 9e-12
ref|XM_030752.1| Homo sapiens aristaless-like homeobox 4 (A... 74 9e-12
gb|AF294629.1|AF294629 Homo sapiens aristaless-like 4 (ALX4... 74 9e-12
ref|NM_021926.1| Homo sapiens aristaless-like homeobox 4 (A... 74 9e-12
ref|NM_007442.1| Mus musculus aristaless 4 (Alx4), mRNA 74 9e-12
ref|NM_079899.1| Drosophila melanogaster twin of eyeless (t... 74 9e-12
gb|AF134350.1|AF134350 Drosophila melanogaster transcriptio... 74 9e-12
gb|AF001465.1|MMAF001465 Mus musculus paired-type homeodoma... 74 9e-12
dbj|AB058691.1|AB058691 Homo sapiens mRNA for KIAA1788 prot... 74 9e-12
dbj|AB017632.1|AB017632 Dugesia japonica mRNA for DjPax-6, ... 74 9e-12
gb|AY051487.1| Drosophila melanogaster GH14454 full length ... 74 9e-12
gb|AF092538.1|AF092538 Gallus gallus paired type homeodomai... 74 9e-12
gb|AF395732.1|AF395732 Mus musculus visual system homeobox ... 74 1e-11
gb|AF155206.1|AF155206 Xenopus laevis homeodomain transcrip... 74 1e-11
emb|AJ278330.1|XLA278330 Xenopus laevis mRNA for Pitx1 prot... 74 1e-11
gb|AF217647.1|AF217647 Xenopus laevis pituitary homeobox ge... 74 1e-11
ref|NM_054068.1| Mus musculus visual system homeobox 1 homo... 74 1e-11
gb|AY056825.1| Mus musculus transcription factor VSX1 (Vsx1... 74 1e-11
gb|AF391758.1|AF391758 Mus musculus homeodomain protein RIN... 74 1e-11
gb|AF001048.1|XLAF001048 Xenopus laevis retinal homeobox 1A... 73 2e-11
gb|AF017273.1|AF017273 Xenopus laevis retinal homeobox 1 (X... 73 2e-11
gb|AY069033.1| Drosophila melanogaster GH01528 full length ... 73 2e-11
ref|NM_057982.1| Drosophila melanogaster PvuII-PstI homolog... 73 2e-11
gb|AF001049.1|XLAF001049 Xenopus laevis retinal homeobox 2A... 73 2e-11
emb|AJ238668.1|DME238668 Drosophila melanogaster mRNA for M... 73 2e-11
gb|U54499.1|MMU54499 Mus musculus homeodomain protein POTX ... 73 2e-11
gb|AF069397.1|AF069397 Gallus gallus paired-like homeodomai... 73 2e-11
ref|NM_000325.1| Homo sapiens paired-like homeodomain trans... 73 2e-11
gb|U69961.1|HSU69961 Homo sapiens solurshin (RGS) mRNA, com... 73 2e-11
gb|BC012696.1|BC012696 Mus musculus, Similar to paired-like... 73 2e-11
ref|NM_077965.1| Homeobox domain 73 2e-11
gb|U70370.1|HSU70370 Human hindlimb expressed homeobox prot... 73 2e-11
ref|NM_053624.1| Rattus norvegicus paired-like homeodomain ... 73 2e-11
gb|BC009412.1|BC009412 Homo sapiens, paired-like homeodomai... 73 2e-11
dbj|AB047298.1|AB047298 Rattus norvegicus mRNA for Ptx1 hom... 73 2e-11
ref|NM_011097.1| Mus musculus paired-like homeodomain trans... 73 2e-11
gb|AF178670.1|AF178670 Gallus gallus homeobox protein Chx10... 73 2e-11
gb|U71206.1|MMU71206 Mus musculus Ptx1 mRNA, complete cds 73 2e-11
ref|XM_047747.3| Homo sapiens paired-like homeodomain trans... 73 2e-11
dbj|D85080.1|D85080 Sea urchin homeobox (Spalx) mRNA, parti... 73 2e-11
gb|BC003685.1|BC003685 Homo sapiens, paired-like homeodomai... 73 2e-11
ref|NM_023951.1| Rattus norvegicus OG9 homeobox gene (Og9x)... 73 2e-11
ref|NM_002653.1| Homo sapiens paired-like homeodomain trans... 73 2e-11
gb|U29174.1|RNU29174 Rattus norvegicus paired-like homeodom... 73 2e-11
dbj|AB050722.1| Paralichthys olivaceus pitx2 mRNA, complete... 72 3e-11
ref|NM_008852.1| Mus musculus paired-like homeodomain trans... 72 3e-11
gb|AF005772.1|AF005772 Mus musculus homeobox protein Pitx3 ... 72 3e-11
ref|NM_014588.2| Homo sapiens visual system homeobox 1 homo... 72 3e-11
gb|AF176797.2|AF176797 Homo sapiens transcription factor VS... 72 3e-11
emb|AJ005787.1|XLAJ5787 Xenopus laevis mRNA for XPtx2b home... 72 3e-11
gb|AF048721.1|AF048721 Homo sapiens ALL1 responsive protein... 72 3e-11
ref|NM_019247.1| Rattus norvegicus paired-like homeodomain ... 72 3e-11
ref|NM_019334.1| Rattus norvegicus paired-like homeodomain ... 72 3e-11
emb|AJ222972.1|RNPTX2B Rattus norvegicus mRNA for homeodoma... 72 3e-11
emb|AJ011005.2|RNO011005 Rattus norvegicus mRNA for Ptx3 pr... 72 3e-11
gb|BC017199.1|BC017199 Homo sapiens, paired mesoderm homeob... 72 3e-11
gb|AF265671.1|AF265671 Xenopus laevis paired-like homeodoma... 72 3e-11
gb|AF156906.1|AF156906 Danio rerio transcription factor Pit... 72 3e-11
gb|U70132.1|MMU70132 Mus musculus bicoid-related homeodomai... 72 3e-11
gb|BC018709.1|BC018709 Homo sapiens, hypothetical protein M... 72 3e-11
gb|U29184.1|CEU29184 Caenorhabditis elegans (mab-18) mRNA, ... 72 3e-11
ref|NM_032753.1| Homo sapiens hypothetical protein MGC15631... 72 3e-11
gb|BC007284.1|BC007284 Homo sapiens, Similar to retina and ... 72 3e-11
gb|AF077767.1|AF077767 Xenopus laevis homeodomain transcrip... 72 3e-11
ref|NM_077357.1| 'Paired box' domain, homeobox protein (pai... 72 3e-11
gb|AF132447.1|AF132447 Danio rerio transcription factor Pit... 72 3e-11
gb|BC011642.1|BC011642 Homo sapiens, Similar to paired-like... 72 3e-11
ref|NM_008888.1| Mus musculus paired mesoderm homeobox 2b (... 72 3e-11
emb|Y14493.1|MMPHOX2B Mus musculus mRNA for PHOX2b protein 72 3e-11
gb|AF181681.2|AF181681 Danio rerio transcription factor Pit... 72 3e-11
gb|AF048723.1|AF048723 Mus musculus ALL1 responsive protein... 72 3e-11
ref|XM_084561.1| Homo sapiens aristaless homeobox (Drosophi... 72 3e-11
gb|AF039832.1|AF039832 Rattus norvegicus homeobox protein (... 72 3e-11
ref|XM_003368.1| Homo sapiens paired mesoderm homeobox 2b (... 72 3e-11
ref|NM_003924.2| Homo sapiens paired mesoderm homeobox 2b (... 72 3e-11
dbj|D82344.1|D82344 Homo sapiens mRNA for NBPhox, complete cds 72 3e-11
dbj|AB006321.1|AB006321 Mus musculus mRNA for Brx1b homeopr... 72 3e-11
ref|XM_084033.1| Homo sapiens hypothetical protein MGC15631... 72 3e-11
gb|U80011.1|MMU80011 Mus musculus pituitary homeobox 2 isof... 72 3e-11
ref|NM_130975.1| Danio rerio paired-like homeodomain transc... 72 3e-11
gb|AF132446.1|AF132446 Danio rerio transcription factor Pit... 72 3e-11
gb|AF076640.1|AF076640 Gallus gallus transcription factor P... 72 3e-11
emb|AJ005786.1|XLAJ5786 Xenopus laevis mRNA for XPtx2a home... 72 3e-11
emb|Y15516.1|HVY15516 Hydra vulgaris mRNA for prdl-b protei... 72 3e-11
gb|AF297713.1|AF297713 Xenopus laevis homeodomain transcrip... 72 3e-11
gb|AF156905.1|AF156905 Danio rerio transcription factor Pit... 72 3e-11
gb|U80010.1|MMU80010 Mus musculus pituitary homeobox 2 isof... 72 3e-11
ref|NM_053869.1| Rattus norvegicus aristaless (Drosophila) ... 72 3e-11
gb|U25967.1|RNU25967 Rattus norvegicus Arix1 homeodomain pr... 72 3e-11
dbj|AB006320.1|AB006320 Mus musculus Brx1a mRNA for homeopr... 72 3e-11
gb|AF048720.1|AF048720 Homo sapiens ALL1 responsive protein... 72 3e-11
ref|NM_008887.1| Mus musculus aristaless homeobox gene homo... 72 3e-11
emb|X75014.1|MMPHOXH M.musculus Phox2 mRNA for homeodomain ... 72 3e-11
gb|U80036.1|MMU80036 Mus musculus orthodenticle-like homeob... 72 3e-11
gb|AF048722.1|AF048722 Homo sapiens ALL1 responsive protein... 72 3e-11
emb|AJ222971.1|RNPTX2A Rattus norvegicus mRNA for homeodoma... 72 3e-11
ref|XM_045596.3| Homo sapiens paired-like homeodomain trans... 72 3e-11
gb|AF201091.1|AF201091 Mus musculus paired-like homeodomain... 72 3e-11
gb|AF251033.1|AF251033 Homo sapiens homeodomain protein RIN... 72 3e-11
gb|AF077092.1|AF077092 Gallus gallus pituitary homeobox pro... 72 3e-11
ref|NM_079889.1| Drosophila melanogaster eyeless (ey), mRNA 72 3e-11
ref|NM_005029.1| Homo sapiens paired-like homeodomain trans... 72 3e-11
gb|AF041339.1|AF041339 Homo sapiens homeodomain protein (PI... 72 3e-11
gb|U31537.1|CEU31537 Caenorhabditis elegans variable abnorm... 72 3e-11
emb|X79493.1|DMEYEL29 D.melanogaster ey mRNA (exons 2-9) 72 3e-11
ref|NM_011098.1| Mus musculus paired-like homeodomain trans... 72 3e-11
gb|AF048724.1|AF048724 Mus musculus ALL1 responsive protein... 72 3e-11
ref|NM_005169.1| Homo sapiens aristaless homeobox (Drosophi... 72 3e-11
gb|U29145.1|CEU29145 Caenorhabditis elegans (mab-18) mRNA, ... 72 3e-11
gb|BC013998.1|BC013998 Homo sapiens, clone MGC:20144 IMAGE:... 72 3e-11
ref|NM_077358.1| Caenorhabditis elegans 72 3e-11
gb|AF251032.1|AF251032 Bos taurus homeodomain protein RINX ... 72 4e-11
gb|AF195616.1|AF195616 Branchiostoma belcheri bicoid type t... 72 4e-11
emb|AJ299416.1|CIN299416 Ciona intestinalis mRNA for Prx1 t... 72 4e-11
emb|X95594.1|LSPAX6GEN L.sanguineus pax6 gene 72 4e-11
ref|NM_079110.1| Drosophila melanogaster Putative homeodoma... 72 4e-11
gb|AF241310.1|AF241310 Acropora millepora transcription fac... 72 4e-11
gb|AF281674.1| Branchiostoma floridae homeodomain protein g... 72 5e-11
ref|NM_006884.1| Homo sapiens short stature homeobox 2 (SHO... 72 5e-11
emb|AJ002367.1|HSSHOTA Homo sapiens mRNA for homeobox prote... 72 5e-11
ref|NM_013833.1| Mus musculus retina and anterior neural fo... 72 5e-11
gb|AF001906.1|AF001906 Mus musculus retinal homeobox protei... 72 5e-11
ref|NM_013435.1| Homo sapiens retinal homeobox protein (RX)... 72 5e-11
gb|AF115392.1|AF115392 Homo sapiens retinal homeobox protei... 72 5e-11
ref|NM_053678.1| Rattus norvegicus retina and anterior neur... 72 5e-11
gb|AF135839.1|AF135839 Rattus norvegicus homeodomain protei... 72 5e-11
dbj|AB034245.1|AB034245 Danio rerio mtx1 mRNA, complete cds 72 5e-11
ref|NM_013665.1| Mus musculus short stature homeobox 2 (Sho... 72 5e-11
gb|U66918.1|MMU66918 Mus musculus OG-12a homeodomain protei... 72 5e-11
gb|AF079561.1|AF079561 Xenopus laevis homeobox protein BIX3... 72 5e-11
gb|U73177.1|MMU73177 Mus musculus paired-type homeobox (rax... 72 5e-11
gb|BC008829.1|BC008829 Homo sapiens, Similar to short statu... 72 5e-11
dbj|AB079883.1| Ciona intestinalis mRNA for Pax6, complete cds 72 5e-11
emb|AJ007939.1|OLA7939 Oryzias latipes Rx2 gene 72 5e-11
emb|AJ250405.1|OLA250405 Oryzias latipes mRNA for Rx2 trans... 72 5e-11
ref|NM_013028.1| Rattus norvegicus Short stature homeobox 2... 72 5e-11
emb|AJ002259.1|RN2259 Rattus Norvegicus mRNA for Prx3A" pro... 72 5e-11
ref|XM_079165.1| aristaless, mRNA 71 6e-11
gb|L08401.1|DROPRDHBA Drosophila melanogaster prd-type home... 71 6e-11
ref|XM_079956.1| Rx, mRNA 71 6e-11
ref|NM_131226.1| Danio rerio retinal homeobox gene 2 (rx2),... 71 6e-11
gb|AF001908.1|AF001908 Danio rerio retinal homeobox protein... 71 6e-11
dbj|AB017633.1|AB017633 Dugesia japonica mRNA for Djrax, pa... 71 6e-11
gb|AF264703.1|AF264703 Astyanax mexicanus retinal homeobox ... 71 6e-11
ref|NM_079317.1| Drosophila melanogaster twin of eyg (toe),... 71 6e-11
dbj|AB015750.1|AB015750 Gallus gallus mRNA for homeobox pro... 71 6e-11
ref|NM_131225.1| Danio rerio retinal homeobox gene 1 (rx1),... 71 6e-11
gb|AF001907.2|AF001907 Danio rerio retinal homeobox protein... 71 6e-11
dbj|AB020318.1|AB020318 Gallus gallus mRNA for homeobox pro... 71 6e-11
gb|AY069177.1| Drosophila melanogaster GH22493 full length ... 71 6e-11
ref|NM_131333.1| Danio rerio visual system homeobox 1 prote... 71 6e-11
gb|AF025348.2|AF025348 Danio rerio paired-like homeobox pro... 71 6e-11
gb|AF053459.2|AMPAXC1 Acropora millepora PaxC transcription... 71 6e-11
gb|U07056.1|CAU07056 Carassius auratus Vsx-1 homeobox prote... 71 6e-11
emb|AJ223300.1|DMAJ3300 Drosophila melanogaster mRNA for ho... 71 6e-11
emb|AJ298300.1|OLA298300 Oryzias latipes mRNA for Rx3 protein 71 6e-11
ref|XM_030575.1| Homo sapiens short stature homeobox (SHOX)... 71 8e-11
ref|NM_000451.2| Homo sapiens short stature homeobox (SHOX)... 71 8e-11
emb|AJ002258.1|RN2258 Rattus Norvegicus mRNA for Prx3A protein 71 8e-11
emb|AJ002368.1|HSSHOTB Homo sapiens mRNA for homeobox prote... 71 8e-11
emb|Y11536.1|HSSHOXA H.sapiens mRNA for SHOXa protein 71 8e-11
gb|AF022654.1|AF022654 Homo sapiens homeodomain protein (OG... 71 8e-11
emb|Y11535.1|HSSHOXB H.sapiens mRNA for SHOXb protein 71 8e-11
gb|U67055.1|MMU67055 Mus musculus OG12b homeodomain protein... 71 8e-11
emb|AJ002260.1|RN2260 Rattus Norvegicus mRNA for Prx3B protein 71 8e-11
gb|U89331.1|HSU89331 Human pseudoautosomal homeodomain-cont... 71 8e-11
gb|AF001393.1|AF001393 Oryzias latipes Medaka OG-12 (MOG-12... 71 8e-11
ref|NM_006883.1| Homo sapiens short stature homeobox (SHOX)... 71 8e-11
ref|NM_003030.2| Homo sapiens short stature homeobox 2 (SHO... 71 8e-11
emb|Y10299.1|DTPRD1 D.tigrina mRNA for DNA-binding protein 71 8e-11
ref|NM_131227.1| Danio rerio retinal homeobox gene 3 (rx3),... 71 8e-11
gb|AF001909.1|AF001909 Danio rerio retinal homeobox protein... 71 8e-11
ref|XM_063425.1| Homo sapiens similar to Homeobox protein C... 70 1e-10
gb|AF004318.1|AF004318 Carassius auratus paired-like homeob... 70 1e-10
ref|NM_057937.1| Drosophila melanogaster (Ptx1), transcrip... 70 1e-10
gb|AF126249.1|AF126249 Hydra vulgaris homeobox protein mana... 70 1e-10
ref|NM_007492.1| Mus musculus aristaless related homeobox g... 70 1e-10
dbj|AB006103.1|AB006103 Mus musculus mRNA for Arx homeoprot... 70 1e-10
emb|AJ250404.1|OLA250404 Oryzias latipes mRNA for Vsx2 tran... 70 1e-10
gb|AF133131.1|AF133131 Homo sapiens homeobox protein DUX5 (... 70 1e-10
ref|NM_012146.1| Homo sapiens double homeobox, 1 (DUX1), mRNA 70 1e-10
emb|AJ001481.1|HSRNADUX1 Homo sapiens mRNA for DUX1 protein 70 1e-10
ref|NM_007701.1| Mus musculus C. elegans ceh-10 homeo domai... 70 1e-10
ref|NM_012149.1| Homo sapiens double homeobox, 5 (DUX5), mRNA 70 1e-10
gb|L34808.1|MUSCHX10A Mus musculus (clone 6) homeobox prote... 70 1e-10
gb|AF178671.1|AF178671 Gallus gallus homeobox protein Chx10... 70 1e-10
ref|NM_131384.1| Danio rerio aristaless related homeobox ge... 70 1e-10
dbj|AB006104.1|AB006104 Danio rerio mRNA for Arx homeoprote... 70 1e-10
ref|NM_005315.1| Homo sapiens goosecoid-like (GSCL), mRNA 70 2e-10
emb|AJ289023.1|PDU289023 Platynereis dumerilii mRNA for hom... 70 2e-10
gb|AF315231.1|AF315231 Strongylocentrotus purpuratus goosec... 70 2e-10
gb|AY038071.1| Homo sapiens aristaless-related homeobox pro... 70 2e-10
ref|NM_077964.1| Homeobox domain 69 2e-10
gb|U52968.1|DMU52968 Drosophila melanogaster goosecoid (D-g... 69 2e-10
emb|X95420.1|DMGSC D.melanogaster mRNA for goosecoid homoeb... 69 2e-10
ref|NM_131462.1| Danio rerio C. elegans CEH-10 homeodomain-... 69 2e-10
gb|U62898.1|DRU62898 Danio rerio ALX (alx) mRNA, complete cds 69 2e-10
dbj|AB034246.1|AB034246 Danio rerio mRNA for Mtx2, complete... 69 2e-10
ref|NM_057601.1| Drosophila melanogaster Goosecoid (Gsc), t... 69 2e-10
emb|X70471.1|GDGOOSEC G.domesticus chicken goosecoid gene 69 3e-10
ref|NM_131017.1| Danio rerio goosecoid (gsc), mRNA 69 3e-10
emb|Y13150.1|MMGOOSEE Mus musculus mRNA for goosecoid homeo... 69 3e-10
emb|X99239.1|MMGSC M.muscsulus mRNA for goosecoid homeobox 69 3e-10
gb|L03395.1|ZEFHDPB Brachydanio rerio goosecoid homeodomain... 69 3e-10
dbj|AB001938.1|AB001938 Cynops pyrrhogaster goosecoid mRNA,... 69 3e-10
ref|NM_010351.1| Mus musculus goosecoid (Gsc), mRNA 69 3e-10
emb|Y13149.1|MMGOOSED Mus musculus mRNA for goosecoid homeo... 69 3e-10
gb|AC004573.1|AC004573 Drosophila melanogaster, chromosome ... 69 3e-10
emb|Y17718.1|SSY17718 Sus scrofa mRNA for goosecoid protein... 69 3e-10
gb|M63872.1|XELHOMBXA X.laevis organizer specific homeobox ... 69 3e-10
ref|NG_000669.1| Drosophila melanogaster PvuII-PstI homolog... 69 3e-10
gb|AC087231.1|AC087231 Caenorhabditis briggsae cosmid CB034... 69 3e-10
gb|AE003589.2|AE003589 Drosophila melanogaster genomic scaf... 69 3e-10
gb|AC008002.3|AC008002 Drosophila melanogaster, chromosome ... 69 3e-10
ref|XM_085071.1| Homo sapiens similar to HOMEOBOX PROTEIN G... 69 3e-10
ref|NM_067960.1| homeobox protein 69 3e-10
gb|M81481.1|XELGSCHB Xenopus laevis goosecoid homeobox prot... 69 3e-10
gb|L03394.1|ZEFGHPA Brachydanio rerio goosecoid homeodomain... 69 3e-10
ref|NM_058422.1| homeobox protein 69 4e-10
gb|M85303.1|SCMSMOXIII Schistosoma mansoni paired-like home... 68 5e-10
gb|AF241311.1|AF241311 Acropora millepora transcription fac... 68 5e-10
gb|AF272397.1|AF272397 Caenorhabditis elegans CEH-17 (ceh-1... 68 5e-10
ref|NM_058992.1| homeobox protein 68 5e-10
emb|X60099.1|XLXANF1 X.laevis XANF-1 mRNA 68 5e-10
gb|AF003151.3| Caenorhabditis elegans cosmid D1007, complet... 68 5e-10
gb|AF183398.1|AF183398 Hydra vulgaris goosecoid (Cngsc) mRN... 68 7e-10
gb|U65435.1|ABU65435 Acipenser baeri homeodomain-containing... 68 7e-10
ref|NM_079318.1| Drosophila melanogaster eyegone (eyg), mRNA 68 7e-10
gb|AF091739.1|AF091739 Drosophila melanogaster Eyegone (eyg... 68 7e-10
emb|AJ311310.1|DJA311310 Dugesia japonica partial mRNA for ... 68 7e-10
ref|NM_076636.1| homeobox protein 68 7e-10
emb|AJ010498.1|GTI010498 Girardia tigrina mRNA for DtPax-6 ... 68 7e-10
gb|AF114441.1|AF114441 Hydra vulgaris homeobox protein Otx ... 67 9e-10
gb|U28370.1|XLU28370 Xenopus laevis homeobox protein (XANF-... 67 9e-10
emb|AJ249563.1|PCA249563 Podocoryne carnea mRNA for paired ... 67 9e-10
emb|AJ001519.1|DMPTX1HOM Drosophila melanogaster mRNA for P... 67 9e-10
ref|NM_131349.1| Danio rerio homeo box (expressed in ES cel... 67 1e-09
gb|U65433.1|DRU65433 Danio rerio homeodomain-containing pro... 67 1e-09
emb|X64904.1|CEUNC4A C.elegans unc-4 mRNA, partial cds 67 1e-09
ref|NM_017179.1| Rattus norvegicus Unc4.1 homeobox (C. eleg... 67 1e-09
dbj|D87748.1|D87748 Rattus norvegicus mRNA for paired-type ... 67 1e-09
ref|NM_063737.1| homeobox protein (otd subfamily) 67 1e-09
ref|NM_013702.1| Mus musculus Unc4.1 homeobox (C. elegans) ... 67 1e-09
emb|AJ001116.1|MMUNCX41 Mus musculus mRNA for Uncx4.1 protein 67 1e-09
emb|Z96107.1|MMZ96107 Mus musculus mRNA for Uncx4.1 67 1e-09
ref|NM_032109.1| Homo sapiens orthopedia homolog (Drosophil... 67 1e-09
gb|BC001800.1|BC001800 Homo sapiens, orthopedia homolog, (D... 67 1e-09
ref|XM_095347.1| Homo sapiens similar to Unc4.1 homeobox (C... 67 1e-09
gb|AF247550.1|AF247550 Mus musculus UNC4 protein mRNA, comp... 67 1e-09
ref|NM_011021.1| Mus musculus orthopedia homolog, (Drosophi... 67 1e-09
emb|Y10413.1|MMORTHOPE M.musculus mRNA for OTP protein 67 1e-09
ref|NM_131100.1| Danio rerio orthopedia protein (otp), mRNA 67 1e-09
gb|AF133130.1|AF133130 Homo sapiens homeobox protein DUX3 (... 67 1e-09
gb|AF071496.2|AF071496 Danio rerio orthopedia protein (Otp)... 67 1e-09
ref|NM_012148.1| Homo sapiens double homeobox, 3 (DUX3), mRNA 67 1e-09
gb|U65434.1|PWU65434 Pleurodeles waltl homeodomain-containi... 67 1e-09
gb|AY058293.1| Drosophila melanogaster GH05443 full length ... 66 2e-09
ref|XM_080599.1| homeobrain, mRNA 66 2e-09
ref|NM_080164.1| Drosophila melanogaster homeobrain (hbn), ... 66 2e-09
emb|AJ276705.1|DME276705 Drosophila melanogaster mRNA for h... 66 2e-09
ref|NM_057678.1| Drosophila melanogaster reversed polarity ... 66 2e-09
emb|X78218.1|DMREPO D.melanogaster mRNA for reversed polarity 66 2e-09
>ref|NM_031944.1| Homo sapiens Mix-like homeobox protein 1 (MILD1), mRNA
Length = 699
Score = 294 bits (752), Expect = 4e-78
Identities = 157/232 (67%), Positives = 157/232 (67%)
Frame = +1
Query: 1 MATAESRALQFAEGAAFPAYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDX 60
MATAESRALQFAEGAAFPAYR RD
Sbjct: 1 MATAESRALQFAEGAAFPAYRAPHAGGALLPPPSPAAALLPAPPAGPGPATFAGFLGRDP 180
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXXQRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLA 120
QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLA
Sbjct: 181 GPAPPPPASLGSPAPPKGAAAPSASQRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLA 360
Query: 121 ALTLLPESRIQVWFQNRRAKSRRQSGKSFQPLARPEIILNHCAPGTETKCLKPQLPLEVD 180
ALTLLPESRIQVWFQNRRAKSRRQSGKSFQPLARPEIILNHCAPGTETKCLKPQLPLEVD
Sbjct: 361 ALTLLPESRIQVWFQNRRAKSRRQSGKSFQPLARPEIILNHCAPGTETKCLKPQLPLEVD 540
Query: 181 VNCLPEPNXXXXXXXXXXXXXQNFETCSPLSEDIGSKLDSWEEHIFSAFGNF 232
VNCLPEPN QNFETCSPLSEDIGSKLDSWEEHIFSAFGNF
Sbjct: 541 VNCLPEPNGVGGGISDSSSQGQNFETCSPLSEDIGSKLDSWEEHIFSAFGNF 696
>gb|AF211891.1|AF211891 Homo sapiens Mix.1 homeobox-like protein (MIXL) mRNA, complete cds
Length = 699
Score = 294 bits (752), Expect = 4e-78
Identities = 157/232 (67%), Positives = 157/232 (67%)
Frame = +1
Query: 1 MATAESRALQFAEGAAFPAYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDX 60
MATAESRALQFAEGAAFPAYR RD
Sbjct: 1 MATAESRALQFAEGAAFPAYRAPHAGGALLPPPSPAAALLPAPPAGPGPATFAGFLGRDP 180
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXXQRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLA 120
QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLA
Sbjct: 181 GPAPPPPASLGSPAPPKGAAAPSASQRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLA 360
Query: 121 ALTLLPESRIQVWFQNRRAKSRRQSGKSFQPLARPEIILNHCAPGTETKCLKPQLPLEVD 180
ALTLLPESRIQVWFQNRRAKSRRQSGKSFQPLARPEIILNHCAPGTETKCLKPQLPLEVD
Sbjct: 361 ALTLLPESRIQVWFQNRRAKSRRQSGKSFQPLARPEIILNHCAPGTETKCLKPQLPLEVD 540
Query: 181 VNCLPEPNXXXXXXXXXXXXXQNFETCSPLSEDIGSKLDSWEEHIFSAFGNF 232
VNCLPEPN QNFETCSPLSEDIGSKLDSWEEHIFSAFGNF
Sbjct: 541 VNCLPEPNGVGGGISDSSSQGQNFETCSPLSEDIGSKLDSWEEHIFSAFGNF 696
>ref|XM_037300.5| Homo sapiens Mix-like homeobox protein 1 (MILD1), mRNA
Length = 693
Score = 273 bits (698), Expect = 8e-72
Identities = 148/231 (64%), Positives = 151/231 (65%)
Frame = +1
Query: 2 ATAESRALQFAEGAAFPAYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDXX 61
AT ESR L++ EGAAFP+ RD
Sbjct: 1 ATGESRELKYCEGAAFPSVPGPHTPVVLLPPAEPAAALLRCAARPRPSDLCGLSFGRDAL 180
Query: 62 XXXXXXXXXXXXXXXXXXXXXXXXQRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAA 121
QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAA
Sbjct: 181 APRRPLASHWLASPPKARRPVAS-QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAA 357
Query: 122 LTLLPESRIQVWFQNRRAKSRRQSGKSFQPLARPEIILNHCAPGTETKCLKPQLPLEVDV 181
LTLLPESRIQVWFQNRRAKSRRQSGKSFQPLARPEIILNHCAPGTETKCLKPQLPLEVDV
Sbjct: 358 LTLLPESRIQVWFQNRRAKSRRQSGKSFQPLARPEIILNHCAPGTETKCLKPQLPLEVDV 537
Query: 182 NCLPEPNXXXXXXXXXXXXXQNFETCSPLSEDIGSKLDSWEEHIFSAFGNF 232
NCLPEPN QNFETCSPLSEDIGSKLDSWEEHIFSAFGNF
Sbjct: 538 NCLPEPNGVGGGISDSSSQGQNFETCSPLSEDIGSKLDSWEEHIFSAFGNF 690
>gb|AF154573.1|AF154573 Mus musculus homeobox protein MIX (MIx) mRNA, complete cds
Length = 2295
Score = 225 bits (574), Expect = 2e-57
Identities = 128/233 (54%), Positives = 139/233 (58%), Gaps = 1/233 (0%)
Frame = +2
Query: 1 MATAESRALQFAEGAAFPAYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDX 60
MA A S+ LQFAEGAAFP + RD
Sbjct: 23 MAAAGSQQLQFAEGAAFPIFPAAHPGGQLLPAMRPASGLPAAPHDSRAPAATQCFPNRDS 202
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXXQRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLA 120
QRRKRTSFS+EQLQLLELVFR+T YPDIHLRERLA
Sbjct: 203 SPTAQTPAGLDPPGPSKGSAAPSAPQRRKRTSFSSEQLQLLELVFRQTMYPDIHLRERLA 382
Query: 121 ALTLLPESRIQVWFQNRRAKSRRQSGKSFQPLARPEIILNHC-APGTETKCLKPQLPLEV 179
ALTLLPESRIQVWFQNRRAKSRRQSGKSFQPL+ + HC APGTE +CLKPQLPLE
Sbjct: 383 ALTLLPESRIQVWFQNRRAKSRRQSGKSFQPLSSRRGVFLHCPAPGTEARCLKPQLPLEA 562
Query: 180 DVNCLPEPNXXXXXXXXXXXXXQNFETCSPLSEDIGSKLDSWEEHIFSAFGNF 232
DVN +P+P+ Q+FET S LSEDIGSKLDSWEEHIFSA GNF
Sbjct: 563 DVNHVPDPS--MTGGGVCTSGSQSFETYSSLSEDIGSKLDSWEEHIFSALGNF 715
>ref|NM_013729.1| Mus musculus Mix1 homeobox-like 1 (Xenopus laevis) (Mixl1), mRNA
Length = 696
Score = 225 bits (574), Expect = 2e-57
Identities = 128/233 (54%), Positives = 139/233 (58%), Gaps = 1/233 (0%)
Frame = +1
Query: 1 MATAESRALQFAEGAAFPAYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDX 60
MA A S+ LQFAEGAAFP + RD
Sbjct: 1 MAAAGSQQLQFAEGAAFPIFPAAHPGGQLLPAMRPASGLPAAPHDSRAPAATQCFPNRDS 180
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXXQRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLA 120
QRRKRTSFS+EQLQLLELVFR+T YPDIHLRERLA
Sbjct: 181 SPTAQTPAGLDPPGPSKGSAAPSAPQRRKRTSFSSEQLQLLELVFRQTMYPDIHLRERLA 360
Query: 121 ALTLLPESRIQVWFQNRRAKSRRQSGKSFQPLARPEIILNHC-APGTETKCLKPQLPLEV 179
ALTLLPESRIQVWFQNRRAKSRRQSGKSFQPL+ + HC APGTE +CLKPQLPLE
Sbjct: 361 ALTLLPESRIQVWFQNRRAKSRRQSGKSFQPLSSRRGVFLHCPAPGTEARCLKPQLPLEA 540
Query: 180 DVNCLPEPNXXXXXXXXXXXXXQNFETCSPLSEDIGSKLDSWEEHIFSAFGNF 232
DVN +P+P+ Q+FET S LSEDIGSKLDSWEEHIFSA GNF
Sbjct: 541 DVNHVPDPS--MTGGGVCTSGSQSFETYSSLSEDIGSKLDSWEEHIFSALGNF 693
>gb|AF135063.1|AF135063 Mus musculus Mix-like homeobox protein (Mml) mRNA, complete cds
Length = 696
Score = 225 bits (574), Expect = 2e-57
Identities = 128/233 (54%), Positives = 139/233 (58%), Gaps = 1/233 (0%)
Frame = +1
Query: 1 MATAESRALQFAEGAAFPAYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDX 60
MA A S+ LQFAEGAAFP + RD
Sbjct: 1 MAAAGSQQLQFAEGAAFPIFPAAHPGGQLLPAMRPASGLPAAPHDSRAPAATQCFPNRDS 180
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXXQRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLA 120
QRRKRTSFS+EQLQLLELVFR+T YPDIHLRERLA
Sbjct: 181 SPTAQTPAGLDPPGPSKGSAAPSAPQRRKRTSFSSEQLQLLELVFRQTMYPDIHLRERLA 360
Query: 121 ALTLLPESRIQVWFQNRRAKSRRQSGKSFQPLARPEIILNHC-APGTETKCLKPQLPLEV 179
ALTLLPESRIQVWFQNRRAKSRRQSGKSFQPL+ + HC APGTE +CLKPQLPLE
Sbjct: 361 ALTLLPESRIQVWFQNRRAKSRRQSGKSFQPLSSRRGVFLHCPAPGTEARCLKPQLPLEA 540
Query: 180 DVNCLPEPNXXXXXXXXXXXXXQNFETCSPLSEDIGSKLDSWEEHIFSAFGNF 232
DVN +P+P+ Q+FET S LSEDIGSKLDSWEEHIFSA GNF
Sbjct: 541 DVNHVPDPS--MTGGGVCTSGSQSFETYSSLSEDIGSKLDSWEEHIFSALGNF 693
>gb|AF201959.1|AF201959 Mus musculus Mix-related homeobox protein mRNA, partial cds
Length = 1945
Score = 216 bits (550), Expect = 1e-54
Identities = 112/148 (75%), Positives = 121/148 (81%), Gaps = 1/148 (0%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRRKRTSFS+EQLQLLELVFR+T YPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS
Sbjct: 221 QRRKRTSFSSEQLQLLELVFRQTMYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 400
Query: 146 GKSFQPLARPEIILNHC-APGTETKCLKPQLPLEVDVNCLPEPNXXXXXXXXXXXXXQNF 204
GKSFQPL+ + HC APGTE +CLKPQLPLE DVN +P+P+ Q+F
Sbjct: 401 GKSFQPLSSRRGVFLHCPAPGTEARCLKPQLPLEADVNHVPDPS--MTGGGVCTSGSQSF 574
Query: 205 ETCSPLSEDIGSKLDSWEEHIFSAFGNF 232
ET S LSEDIGSKLDSWEEHIFSA GNF
Sbjct: 575 ETYSSLSEDIGSKLDSWEEHIFSALGNF 658
>gb|AF218357.1|AF218357 Homo sapiens homeodomain protein MIX (MIX) gene, complete cds
Length = 4338
Score = 189 bits (479), Expect = 2e-46
Identities = 91/109 (83%), Positives = 91/109 (83%)
Frame = +2
Query: 124 LLPESRIQVWFQNRRAKSRRQSGKSFQPLARPEIILNHCAPGTETKCLKPQLPLEVDVNC 183
LL QVWFQNRRAKSRRQSGKSFQPLARPEIILNHCAPGTETKCLKPQLPLEVDVNC
Sbjct: 2816 LLFSPLFQVWFQNRRAKSRRQSGKSFQPLARPEIILNHCAPGTETKCLKPQLPLEVDVNC 2995
Query: 184 LPEPNXXXXXXXXXXXXXQNFETCSPLSEDIGSKLDSWEEHIFSAFGNF 232
LPEPN QNFETCSPLSEDIGSKLDSWEEHIFSAFGNF
Sbjct: 2996 LPEPNGVGGGISDSSSQGQNFETCSPLSEDIGSKLDSWEEHIFSAFGNF 3142
Score = 113 bits (283), Expect = 1e-23
Identities = 70/132 (53%), Positives = 70/132 (53%)
Frame = +1
Query: 1 MATAESRALQFAEGAAFPAYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDX 60
MATAESRALQFAEGAAFPAYR RD
Sbjct: 1006 MATAESRALQFAEGAAFPAYRAPHAGGALLPPPSPAAALLPAPPAGPGPATFAGFLGRDP 1185
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXXQRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLA 120
QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLA
Sbjct: 1186 GPAPPPPASLGSPAPPKGAAAPSASQRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLA 1365
Query: 121 ALTLLPESRIQV 132
ALTLLPESRIQV
Sbjct: 1366 ALTLLPESRIQV 1401
>gb|U34615.1|GGU34615 Gallus gallus homeobox protein CMIX mRNA, complete cds
Length = 886
Score = 97.1 bits (240), Expect = 1e-18
Identities = 48/61 (78%), Positives = 53/61 (86%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRRKRTSF+A QL+ LELVF+ T YPDI+LRERLA T +PESRIQVWFQNRRAKSRRQ
Sbjct: 173 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAKSRRQR 352
Query: 146 G 146
G
Sbjct: 353 G 355
>emb|AJ004903.1|GGJ004903 Gallus gallus mRNA for CMIX homeobox gene, partial cds
Length = 409
Score = 93.6 bits (231), Expect = 1e-17
Identities = 46/59 (77%), Positives = 52/59 (87%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRRKRTSF+A QL+ LELVF+ T YPDI+LRERLA T +PESRIQVWFQNRRAKSRR+
Sbjct: 9 QRRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNRRAKSRRR 185
>ref|NM_130940.1| Danio rerio mixer (mix), mRNA
Length = 1494
Score = 90.1 bits (222), Expect = 1e-16
Identities = 44/62 (70%), Positives = 53/62 (84%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQSG 146
RRKRT+F+ +Q+ +LE V+ T+YPDI+LRE+L ALT LPESRIQVWFQNRRAKSRRQ G
Sbjct: 314 RRKRTNFTQQQIDVLEKVYLDTKYPDIYLREKLEALTGLPESRIQVWFQNRRAKSRRQVG 493
Query: 147 KS 148
S
Sbjct: 494 IS 499
>gb|AF121771.1|AF121771 Danio rerio homeodomain transcription factor Mixer (mix) mRNA,
complete cds
Length = 1494
Score = 90.1 bits (222), Expect = 1e-16
Identities = 44/62 (70%), Positives = 53/62 (84%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQSG 146
RRKRT+F+ +Q+ +LE V+ T+YPDI+LRE+L ALT LPESRIQVWFQNRRAKSRRQ G
Sbjct: 314 RRKRTNFTQQQIDVLEKVYLDTKYPDIYLREKLEALTGLPESRIQVWFQNRRAKSRRQVG 493
Query: 147 KS 148
S
Sbjct: 494 IS 499
>gb|AF411465.1|AF411465 Petromyzon marinus transcription factor Pax7 mRNA, complete cds
Length = 2190
Score = 85.1 bits (209), Expect = 4e-15
Identities = 46/91 (50%), Positives = 55/91 (59%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA T L E+R+QVWF NRRA+ R+Q+
Sbjct: 842 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQA 1021
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A NH PG P LP
Sbjct: 1022G------ANQLAAFNHLIPGGFPPASMPGLP 1096
>gb|AF014369.1|AF014369 Danio rerio transcription factor PAX7D (pax7) mRNA, complete cds
Length = 2317
Score = 84.3 bits (207), Expect = 7e-15
Identities = 46/91 (50%), Positives = 55/91 (59%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA T L E+R+QVWF NRRA+ R+Q+
Sbjct: 995 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQA 1174
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A NH PG P LP
Sbjct: 1175 G------ANQLAAFNHLLPGGFPPTGMPTLP 1249
>emb|Z35141.1|HSPAX7GE H.sapiens Pax-7 gene for transcription factor
Length = 1503
Score = 84.3 bits (207), Expect = 7e-15
Identities = 46/91 (50%), Positives = 55/91 (59%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA T L E+R+QVWF NRRA+ R+Q+
Sbjct: 751 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQA 930
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A NH PG P LP
Sbjct: 931 G------ANQLAAFNHLLPGGFPPTGMPTLP 1005
>dbj|D87838.1|D87838 Gallus gallus mRNA for PAX7 protein, complete cds
Length = 2132
Score = 84.3 bits (207), Expect = 7e-15
Identities = 46/91 (50%), Positives = 55/91 (59%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA T L E+R+QVWF NRRA+ R+Q+
Sbjct: 828 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQA 1007
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A NH PG P LP
Sbjct: 1008G------ANQLAAFNHLLPGGFPPTGMPTLP 1082
>ref|NM_013945.1| Homo sapiens paired box gene 7 (PAX7), transcript variant 2, mRNA
Length = 2255
Score = 84.3 bits (207), Expect = 7e-15
Identities = 46/91 (50%), Positives = 55/91 (59%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA T L E+R+QVWF NRRA+ R+Q+
Sbjct: 1242 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQA 1421
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A NH PG P LP
Sbjct: 1422 G------ANQLAAFNHLLPGGFPPTGMPTLP 1496
>ref|NM_008781.1| Mus musculus paired box gene 3 (Pax3), mRNA
Length = 2347
Score = 84.3 bits (207), Expect = 7e-15
Identities = 45/91 (49%), Positives = 55/91 (59%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA L E+R+QVWF NRRA+ R+Q+
Sbjct: 952 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQA 1131
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A + NH PG P LP
Sbjct: 1132 G------ANQLMAFNHLIPGGFPPTAMPTLP 1206
>emb|X59358.1|MMPAX3R Mouse Pax-3 gene for a DNA binding protein, involved in early
neurogenesis
Length = 2347
Score = 84.3 bits (207), Expect = 7e-15
Identities = 45/91 (49%), Positives = 55/91 (59%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA L E+R+QVWF NRRA+ R+Q+
Sbjct: 952 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQA 1131
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A + NH PG P LP
Sbjct: 1132 G------ANQLMAFNHLIPGGFPPTAMPTLP 1206
>gb|AF014368.1|AF014368 Danio rerio transcription factor PAX7C (pax7) mRNA, complete cds
Length = 2225
Score = 84.3 bits (207), Expect = 7e-15
Identities = 46/91 (50%), Positives = 55/91 (59%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA T L E+R+QVWF NRRA+ R+Q+
Sbjct: 995 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQA 1174
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A NH PG P LP
Sbjct: 1175 G------ANQLAAFNHLLPGGFPPTGMPTLP 1249
>gb|AF000673.1|AF000673 Coturnix coturnix paired-box transcription factor protein (Pax-3)
mRNA, partial cds
Length = 3080
Score = 84.3 bits (207), Expect = 7e-15
Identities = 45/91 (49%), Positives = 55/91 (59%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA L E+R+QVWF NRRA+ R+Q+
Sbjct: 642 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQA 821
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A + NH PG P LP
Sbjct: 822 G------ANQLMAFNHLIPGGFPPSAMPTLP 896
>dbj|AK014337.1|AK014337 Mus musculus 14, 17 days embryo head cDNA, RIKEN full-length
enriched library, clone:3230402M02:paired box gene 3,
full insert sequence
Length = 1891
Score = 84.3 bits (207), Expect = 7e-15
Identities = 45/91 (49%), Positives = 55/91 (59%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA L E+R+QVWF NRRA+ R+Q+
Sbjct: 744 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQA 923
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A + NH PG P LP
Sbjct: 924 G------ANQLMAFNHLIPGGFPPTAMPTLP 998
>gb|U02368.1|HSU02368 Human PAX3/forkhead transcription factor gene fusion mRNA, complete
cds
Length = 3200
Score = 84.3 bits (207), Expect = 7e-15
Identities = 45/91 (49%), Positives = 55/91 (59%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA L E+R+QVWF NRRA+ R+Q+
Sbjct: 703 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQA 882
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A + NH PG P LP
Sbjct: 883 G------ANQLMAFNHLIPGGFPPTAMPTLP 957
>gb|BC008826.1|BC008826 Homo sapiens, paired box gene 3 (Waardenburg syndrome 1), clone
MGC:12856 IMAGE:4099446, mRNA, complete cds
Length = 2827
Score = 84.3 bits (207), Expect = 7e-15
Identities = 45/91 (49%), Positives = 55/91 (59%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA L E+R+QVWF NRRA+ R+Q+
Sbjct: 839 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQA 1018
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A + NH PG P LP
Sbjct: 1019G------ANQLMAFNHLIPGGFPPTAMPTLP 1093
>gb|L07483.1|HUMPBH3B Homo sapiens paired-box protein (PAX3) mRNA, partial exon
Length = 834
Score = 84.3 bits (207), Expect = 7e-15
Identities = 45/91 (49%), Positives = 55/91 (59%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA L E+R+QVWF NRRA+ R+Q+
Sbjct: 112 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQA 291
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A + NH PG P LP
Sbjct: 292 G------ANQLMAFNHLIPGGFPPTAMPTLP 366
>gb|M27063.1|XELMIX1HB Xenopus laevis homeobox protein (Mix.1) mRNA, complete cds
Length = 1653
Score = 84.3 bits (207), Expect = 7e-15
Identities = 47/93 (50%), Positives = 56/93 (59%), Gaps = 2/93 (2%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRRKRT F+ QL +LE F+ YPDIH RE LA +PESRIQVWFQNRRAK RRQ
Sbjct: 354 QRRKRTFFTQAQLDILEQFFQTNMYPDIHHREELARHIYIPESRIQVWFQNRRAKVRRQG 533
Query: 146 GKSFQPLARPEIILNHCAPGTE--TKCLKPQLP 176
K+ +P I+ H GT + + P P
Sbjct: 534 AKATKP-----ILAGHHYSGTSGANRAMFPSAP 617
>gb|AF178854.1|AF178854 Synthetic construct Pax3-forkhead fusion protein (Pax3/FKHR) mRNA,
complete cds
Length = 2725
Score = 84.3 bits (207), Expect = 7e-15
Identities = 45/91 (49%), Positives = 55/91 (59%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA L E+R+QVWF NRRA+ R+Q+
Sbjct: 863 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQA 1042
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A + NH PG P LP
Sbjct: 1043G------ANQLMAFNHLIPGGFPPTAMPTLP 1117
>ref|NM_002584.1| Homo sapiens paired box gene 7 (PAX7), transcript variant 1, mRNA
Length = 2272
Score = 84.3 bits (207), Expect = 7e-15
Identities = 46/91 (50%), Positives = 55/91 (59%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA T L E+R+QVWF NRRA+ R+Q+
Sbjct: 1248 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQA 1427
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A NH PG P LP
Sbjct: 1428 G------ANQLAAFNHLLPGGFPPTGMPTLP 1502
>emb|X96743.1|HSPAX7M H.sapiens mRNA for paired box containing transcription factor, PAX7
Length = 2272
Score = 84.3 bits (207), Expect = 7e-15
Identities = 46/91 (50%), Positives = 55/91 (59%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA T L E+R+QVWF NRRA+ R+Q+
Sbjct: 1248 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQA 1427
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A NH PG P LP
Sbjct: 1428 G------ANQLAAFNHLLPGGFPPTGMPTLP 1502
>gb|AF014370.1|AF014370 Danio rerio transcription factor PAX7E (pax7) mRNA, complete cds
Length = 2403
Score = 84.3 bits (207), Expect = 7e-15
Identities = 46/91 (50%), Positives = 55/91 (59%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA T L E+R+QVWF NRRA+ R+Q+
Sbjct: 995 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQA 1174
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A NH PG P LP
Sbjct: 1175 G------ANQLAAFNHLLPGGFPPTGMPTLP 1249
>gb|AF254422.2|AF254422 Mus musculus paired box transcription factor PAX7 (Pax7) mRNA,
partial cds
Length = 4244
Score = 84.3 bits (207), Expect = 7e-15
Identities = 46/91 (50%), Positives = 55/91 (59%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA T L E+R+QVWF NRRA+ R+Q+
Sbjct: 613 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQA 792
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A NH PG P LP
Sbjct: 793 G------ANQLAAFNHLLPGGFPPTGMPTLP 867
>gb|U50745.1|XLU50745 Xenopus laevis homeobox protein Mix.2 mRNA, complete cds
Length = 1110
Score = 83.2 bits (204), Expect = 2e-14
Identities = 41/66 (62%), Positives = 47/66 (71%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRRKRT F+ QL +LE F+ YPDIH RE LA +PESRIQVWFQNRRAK RRQ
Sbjct: 280 QRRKRTFFTQAQLDILEQFFQTNMYPDIHHREELARHIYIPESRIQVWFQNRRAKVRRQG 459
Query: 146 GKSFQP 151
K+ +P
Sbjct: 460 AKATKP 477
>gb|U20792.1|MMU20792 Mus musculus Pax7 mRNA, partial cds
Length = 872
Score = 83.2 bits (204), Expect = 2e-14
Identities = 46/91 (50%), Positives = 54/91 (58%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA T L E+R QVWF NRRA+ R+Q+
Sbjct: 541 QRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARFQVWFSNRRARWRKQA 720
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A NH PG P LP
Sbjct: 721 G------ANQLAAFNHLLPGGFPPTGMPTLP 795
>gb|AC007582.7| Drosophila melanogaster, chromosome 2R, region 60F-60F, BAC clone
BACR17E16, complete sequence
Length = 180162
Score = 82.4 bits (202), Expect = 3e-14
Identities = 39/63 (61%), Positives = 48/63 (75%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT+YPD++ RE LA T L E+RIQVWF NRRA+ R+ S
Sbjct: 150784 QRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHS 150963
Query: 146 GKS 148
G S
Sbjct: 150964 GGS 150972
Score = 75.5 bits (184), Expect = 3e-12
Identities = 36/70 (51%), Positives = 47/70 (66%)
Frame = -3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+FS +Q+ LE +F RT+YPD++ RE LA T L E+R+QVWF NRRA+ R+Q
Sbjct: 128920 QRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQL 128741
Query: 146 GKSFQPLARP 155
P P
Sbjct: 128740 NTQQVPSFAP 128711
>gb|AY071593.1| Drosophila melanogaster RE64348 full length cDNA
Length = 2250
Score = 82.4 bits (202), Expect = 3e-14
Identities = 39/63 (61%), Positives = 48/63 (75%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT+YPD++ RE LA T L E+RIQVWF NRRA+ R+ S
Sbjct: 864 QRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHS 1043
Query: 146 GKS 148
G S
Sbjct: 1044GGS 1052
>gb|AE003466.1|AE003466 Drosophila melanogaster genomic scaffold 142000013386038 section 15 of
15, complete sequence
Length = 283099
Score = 82.4 bits (202), Expect = 3e-14
Identities = 39/63 (61%), Positives = 48/63 (75%)
Frame = -1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT+YPD++ RE LA T L E+RIQVWF NRRA+ R+ S
Sbjct: 22315 QRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHS 22136
Query: 146 GKS 148
G S
Sbjct: 22135 GGS 22127
Score = 75.5 bits (184), Expect = 3e-12
Identities = 36/70 (51%), Positives = 47/70 (66%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+FS +Q+ LE +F RT+YPD++ RE LA T L E+R+QVWF NRRA+ R+Q
Sbjct: 44180 QRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQL 44359
Query: 146 GKSFQPLARP 155
P P
Sbjct: 44360 NTQQVPSFAP 44389
>dbj|AB066289.1|AB066289 Leucopsarion petersii otx1 gene for transcriptional factor,
complete cds
Length = 1542
Score = 82.0 bits (201), Expect = 3e-14
Identities = 39/70 (55%), Positives = 50/70 (70%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 221 QRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 400
Query: 146 GKSFQPLARP 155
ARP
Sbjct: 401 QSGSSAKARP 430
>gb|AF165886.1|AF165886 Branchiostoma floridae paired-box transcription factor (Pax3/7)
mRNA, complete cds
Length = 1913
Score = 82.0 bits (201), Expect = 3e-14
Identities = 42/74 (56%), Positives = 50/74 (66%), Gaps = 4/74 (5%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+ EQL+ LE F RT YPDI+ RE LA T L E+R+QVWF NRRA+ R+Q
Sbjct: 703 QRRSRTTFTPEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQQ 882
Query: 146 G----KSFQPLARP 155
G SF PL P
Sbjct: 883 GAQQIPSFMPLGYP 924
>dbj|AK012493.1|AK012493 Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:2700066P22:paired box gene 3,
full insert sequence
Length = 1637
Score = 81.6 bits (200), Expect = 4e-14
Identities = 44/91 (48%), Positives = 54/91 (58%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QR RT+F+AEQL+ LE F RT YPDI+ RE LA L E+R+QVWF NRRA+ R+Q+
Sbjct: 744 QRGSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQA 923
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
G A + NH PG P LP
Sbjct: 924 G------ANQLMAFNHLIPGGFPPTAMPTLP 998
>ref|NM_131277.1| Danio rerio paired box gene 3 (pax3), mRNA
Length = 2734
Score = 81.6 bits (200), Expect = 4e-14
Identities = 42/80 (52%), Positives = 52/80 (64%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA L E+R+QVWF NRRA+ R+Q+
Sbjct: 934 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQA 1113
Query: 146 GKSFQPLARPEIILNHCAPG 165
G A + NH PG
Sbjct: 1114 G------ANQLMAFNHLIPG 1155
>gb|AF014366.1|AF014366 Danio rerio transcription factor PAX3 (pax3) mRNA, complete cds
Length = 2734
Score = 81.6 bits (200), Expect = 4e-14
Identities = 42/80 (52%), Positives = 52/80 (64%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT YPDI+ RE LA L E+R+QVWF NRRA+ R+Q+
Sbjct: 934 QRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQA 1113
Query: 146 GKSFQPLARPEIILNHCAPG 165
G A + NH PG
Sbjct: 1114 G------ANQLMAFNHLIPG 1155
>gb|AF043740.1|AF043740 Branchiostoma floridae amphioxus Otx transcription factor (Otx)
mRNA, complete cds
Length = 2436
Score = 81.6 bits (200), Expect = 4e-14
Identities = 37/63 (58%), Positives = 51/63 (80%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q+
Sbjct: 257 QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQA 436
Query: 146 GKS 148
G++
Sbjct: 437 GQA 445
>emb|AJ251846.1|XLA251846 Xenopus laevis mRNA for OTX5b protein (otx5b gene)
Length = 1575
Score = 81.3 bits (199), Expect = 6e-14
Identities = 42/83 (50%), Positives = 56/83 (66%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 402 QRRERTTFTRAQLDILESLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 581
Query: 146 GKSFQPLARPEIILNHCAPGTET 168
+S A+P +P ET
Sbjct: 582 QQS-TGQAKPRPAKKKTSPARET 647
>dbj|AB034702.1|AB034702 Xenopus laevis Xotx5 mRNA, complete cds
Length = 1310
Score = 81.3 bits (199), Expect = 6e-14
Identities = 42/83 (50%), Positives = 56/83 (66%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 278 QRRERTTFTRAQLDILESLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 457
Query: 146 GKSFQPLARPEIILNHCAPGTET 168
+S A+P +P ET
Sbjct: 458 QQS-TGQAKPRPAKKKTSPARET 523
>gb|AY040535.1| Schistocerca americana pairberry 1 transcription factor (pby1)
mRNA, partial cds
Length = 2101
Score = 81.3 bits (199), Expect = 6e-14
Identities = 44/92 (47%), Positives = 58/92 (62%), Gaps = 3/92 (3%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+FS +QL+ LE F+RT+YPD++ RE LA T L E+R+QVWF NRRA+ R+Q
Sbjct: 407 QRRSRTTFSGDQLETLERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQL 586
Query: 146 GKSFQPLAR---PEIILNHCAPGTETKCLKPQ 174
+P R P L P T T CL+ +
Sbjct: 587 NSPSRPSRRCRPPPPPLPPAGP-TTTVCLRAE 679
>gb|AY036005.1| Danio rerio orthodenticle-related homeobox 5 mRNA, complete cds
Length = 1411
Score = 81.3 bits (199), Expect = 6e-14
Identities = 39/88 (44%), Positives = 56/88 (63%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 331 QRRERTTFTRAQLDVLEALFSKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 510
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKP 173
+ +P +P ++ +P
Sbjct: 511 QQQTSGQTKPRPPKKKSSPARDSSASEP 594
>dbj|D26172.1|ZEFOTX1 Zebrafish otx1 mRNA for otx homeoprotein, complete cds
Length = 1629
Score = 80.9 bits (198), Expect = 8e-14
Identities = 38/70 (54%), Positives = 49/70 (69%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 527 QRRERTTFTRSQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 706
Query: 146 GKSFQPLARP 155
RP
Sbjct: 707 QSGSSTKTRP 736
>gb|U02308.1|HSU02308 Human PAX-3-FKHR gene fusion mRNA, partial cds
Length = 3517
Score = 80.9 bits (198), Expect = 8e-14
Identities = 46/92 (50%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELV-FRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR RT+F+AEQL+ LE V F RT YPDI+ RE LA L E+R+QVWF NRRA+ R+Q
Sbjct: 211 QRRSRTTFTAEQLEELEHVAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 390
Query: 145 SGKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
+G A + NH PG P LP
Sbjct: 391 AG------ANQLMAFNHLIPGGFPPTAMPTLP 468
>gb|AF461039.1|AF461039 Mus musculus paired-type homeobox Atx mRNA, partial cds
Length = 850
Score = 80.9 bits (198), Expect = 8e-14
Identities = 36/59 (61%), Positives = 49/59 (83%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR RT+F+A+QL+ LE F++T YPD+ +RERLA T LPE+R+QVWF+NRRAK R++
Sbjct: 214 QRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 390
>ref|NM_130865.1| Mus musculus diencephalon/mesencephalon-expressed brain homeobox 1
(Dmbx1), mRNA
Length = 1146
Score = 80.9 bits (198), Expect = 8e-14
Identities = 36/59 (61%), Positives = 49/59 (83%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR RT+F+A+QL+ LE F++T YPD+ +RERLA T LPE+R+QVWF+NRRAK R++
Sbjct: 211 QRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 387
>gb|AF463513.1|AF463513 Mus musculus cerebellar-diencephalic-mesencephalic homeobox protein
(Cdmx) mRNA, complete cds
Length = 1146
Score = 80.9 bits (198), Expect = 8e-14
Identities = 36/59 (61%), Positives = 49/59 (83%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR RT+F+A+QL+ LE F++T YPD+ +RERLA T LPE+R+QVWF+NRRAK R++
Sbjct: 211 QRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 387
>gb|AF421857.1| Mus musculus paired-like homeobox protein DMBX1 (Dmbx1) mRNA,
complete cds; alternatively spliced
Length = 1146
Score = 80.9 bits (198), Expect = 8e-14
Identities = 36/59 (61%), Positives = 49/59 (83%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR RT+F+A+QL+ LE F++T YPD+ +RERLA T LPE+R+QVWF+NRRAK R++
Sbjct: 211 QRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 387
>gb|AY040861.1| Scyliorhinus canicula homeobox protein Otx5 (Otx5) mRNA, complete
cds
Length = 873
Score = 80.9 bits (198), Expect = 8e-14
Identities = 41/71 (57%), Positives = 53/71 (73%), Gaps = 1/71 (1%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 112 QRRERTTFTRAQLDILESLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 291
Query: 146 GKSF-QPLARP 155
+S Q ARP
Sbjct: 292 QQSSGQAKARP 324
>ref|NM_131250.1| Danio rerio orthodenticle homolog 1 (otx1), mRNA
Length = 2083
Score = 80.9 bits (198), Expect = 8e-14
Identities = 38/70 (54%), Positives = 49/70 (69%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 155 QRRERTTFTRSQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 334
Query: 146 GKSFQPLARP 155
RP
Sbjct: 335 QSGSSTKTRP 364
>gb|U14591.1|DRU14591 Danio rerio orthodenticle-related protein 1 (zOtx1) mRNA, complete
cds
Length = 2083
Score = 80.9 bits (198), Expect = 8e-14
Identities = 38/70 (54%), Positives = 49/70 (69%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 155 QRRERTTFTRSQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 334
Query: 146 GKSFQPLARP 155
RP
Sbjct: 335 QSGSSTKTRP 364
>ref|XM_060436.2| Homo sapiens similar to dJ1109J22.1 (novel homeobox domain protein)
(LOC127343), mRNA
Length = 1134
Score = 80.9 bits (198), Expect = 8e-14
Identities = 36/59 (61%), Positives = 49/59 (83%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR RT+F+A+QL+ LE F++T YPD+ +RERLA T LPE+R+QVWF+NRRAK R++
Sbjct: 196 QRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 372
>gb|AF461038.1|AF461038 Gallus gallus paired-type homeobox Atx mRNA, partial cds
Length = 908
Score = 80.9 bits (198), Expect = 8e-14
Identities = 36/59 (61%), Positives = 49/59 (83%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR RT+F+A+QL+ LE F++T YPD+ +RERLA T LPE+R+QVWF+NRRAK R++
Sbjct: 199 QRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 375
>gb|U02309.1|HSU02309 Human PAX-3 mRNA, partial cds
Length = 1213
Score = 80.9 bits (198), Expect = 8e-14
Identities = 46/92 (50%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELV-FRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR RT+F+AEQL+ LE V F RT YPDI+ RE LA L E+R+QVWF NRRA+ R+Q
Sbjct: 211 QRRSRTTFTAEQLEELEHVAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 390
Query: 145 SGKSFQPLARPEIILNHCAPGTETKCLKPQLP 176
+G A + NH PG P LP
Sbjct: 391 AG------ANQLMAFNHLIPGGFPPTAMPTLP 468
>gb|AF421858.1| Mus musculus paired-like homeobox protein DMBX1 (Dmbx1) mRNA,
complete cds; alternatively spliced
Length = 1131
Score = 80.9 bits (198), Expect = 8e-14
Identities = 36/59 (61%), Positives = 49/59 (83%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR RT+F+A+QL+ LE F++T YPD+ +RERLA T LPE+R+QVWF+NRRAK R++
Sbjct: 196 QRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 372
>dbj|AB012299.1|AB012299 Lampetra japonica mRNA for LjOtxA, complete cds
Length = 2221
Score = 80.5 bits (197), Expect = 1e-13
Identities = 39/69 (56%), Positives = 50/69 (71%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 576 QRRERTTFTRAQLDVLEALFSKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 755
Query: 146 GKSFQPLAR 154
Q AR
Sbjct: 756 QSGGQSKAR 782
>gb|AF005999.1|AF005999 Xenopus laevis homeobox protein (milk) mRNA, complete cds
Length = 1535
Score = 80.5 bits (197), Expect = 1e-13
Identities = 40/65 (61%), Positives = 46/65 (70%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQSG 146
RRKRT +S L LLE F+ YPDIH RE LA LPESRIQVWFQNRR+K+RRQ
Sbjct: 310 RRKRTVYSPSDLALLEQYFQTNMYPDIHQREELARQMGLPESRIQVWFQNRRSKARRQGS 489
Query: 147 KSFQP 151
+S +P
Sbjct: 490 RSTKP 504
>ref|XM_049268.1| Homo sapiens similar to HOMEOBOX PROTEIN OTX1 (LOC93105), mRNA
Length = 2138
Score = 80.1 bits (196), Expect = 1e-13
Identities = 38/70 (54%), Positives = 50/70 (71%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 332 QRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 511
Query: 146 GKSFQPLARP 155
+RP
Sbjct: 512 QSGSGTKSRP 541
>gb|BC007621.1|BC007621 Homo sapiens, Similar to Orthodenticle (Drosophila) homolog 1,
clone MGC:15736 IMAGE:3355563, mRNA, complete cds
Length = 2155
Score = 80.1 bits (196), Expect = 1e-13
Identities = 38/70 (54%), Positives = 50/70 (71%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 332 QRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 511
Query: 146 GKSFQPLARP 155
+RP
Sbjct: 512 QSGSGTKSRP 541
>dbj|AB012300.1|AB012300 Lampetra japonica mRNA for LjOtxB, complete cds
Length = 1628
Score = 79.7 bits (195), Expect = 2e-13
Identities = 40/70 (57%), Positives = 52/70 (74%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 453 QRRERTTFTRAQLDILESLFSKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQH 632
Query: 146 GKSFQPLARP 155
+ Q ARP
Sbjct: 633 NAA-QNKARP 659
>ref|NM_013109.1| Rattus norvegicus Orthodenticle (Drosophila) homolog 1 (Otx1),
mRNA
Length = 1230
Score = 79.7 bits (195), Expect = 2e-13
Identities = 38/70 (54%), Positives = 50/70 (71%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 154 QRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 333
Query: 146 GKSFQPLARP 155
+RP
Sbjct: 334 QSGNGTKSRP 363
>gb|L32602.1|RATOTX1X Rattus norvegicus OTX1 mRNA, complete cds
Length = 1230
Score = 79.7 bits (195), Expect = 2e-13
Identities = 38/70 (54%), Positives = 50/70 (71%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 154 QRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 333
Query: 146 GKSFQPLARP 155
+RP
Sbjct: 334 QSGNGTKSRP 363
>emb|AJ278856.1|PDU78856 Platynereis dumerilii mRNA for Otx homeobox transcription factor
Length = 701
Score = 79.3 bits (194), Expect = 2e-13
Identities = 39/73 (53%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ- 144
QRR+RT+F+ QL +LE +F++TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 289 QRRERTTFTRAQLDVLESLFQKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 468
Query: 145 -SGKSFQPLARPE 156
+ P +RP+
Sbjct: 469 KAQDGRNPASRPK 507
>ref|NM_131215.1| Danio rerio orthodenticle homolog 3 (otx3), mRNA
Length = 1251
Score = 79.3 bits (194), Expect = 2e-13
Identities = 37/63 (58%), Positives = 49/63 (77%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 346 QRRERTTFTRTQLDILESLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 525
Query: 146 GKS 148
+S
Sbjct: 526 QQS 534
>dbj|D26174.1|ZEFOTX3 Zebrafish otx3 mRNA for otx homeoprotein, complete cds
Length = 1251
Score = 79.3 bits (194), Expect = 2e-13
Identities = 37/63 (58%), Positives = 49/63 (77%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 346 QRRERTTFTRTQLDILESLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 525
Query: 146 GKS 148
+S
Sbjct: 526 QQS 534
>gb|AF081948.1|AF081948 Girardia tigrina homeobox protein (Otx) mRNA, partial cds
Length = 586
Score = 79.3 bits (194), Expect = 2e-13
Identities = 49/120 (40%), Positives = 71/120 (58%), Gaps = 18/120 (15%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS- 145
RR RT+F+ +QL++LEL F + RYPDI LR+ +++ LPESR+QVWF+NRRAK R++S
Sbjct: 97 RRDRTTFTRQQLEILELHFEKNRYPDIFLRDEISSKINLPESRVQVWFKNRRAKERQKSK 276
Query: 146 ----GKSFQPLARPEI----ILNHCAPGTETKCLK---------PQLPLEVDVNCLPEPN 188
G + QP P + ILN +T LK P L + +++CL + N
Sbjct: 277 QKPNGYTIQPEPLPALPDKHILNRMT-AIKTGNLKDKMKICQEIPDLRVTNELSCLTDSN 453
>dbj|AB061768.1|AB061768 Hemicentrotus pulcherrimus HpOtxL mRNA for late type
orthodenticle-related protein, complete cds
Length = 3478
Score = 79.3 bits (194), Expect = 2e-13
Identities = 37/59 (62%), Positives = 47/59 (78%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F RTRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 781 QRRERTTFTRAQLDVLETLFSRTRYPDIFMREEVAMKINLPESRVQVWFKNRRAKCRQQ 957
>dbj|AB011526.1|AB011526 Hemicentrotus pulcherrimus early type Otx (HpOtxE) mRNA, complete
cds
Length = 3260
Score = 79.3 bits (194), Expect = 2e-13
Identities = 37/59 (62%), Positives = 47/59 (78%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F RTRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 569 QRRERTTFTRAQLDVLETLFSRTRYPDIFMREEVAMKINLPESRVQVWFKNRRAKCRQQ 745
>dbj|D84254.1|D84254 Halocynthia roretzi mRNA for Pax-37, complete cds
Length = 2573
Score = 79.3 bits (194), Expect = 2e-13
Identities = 39/70 (55%), Positives = 47/70 (66%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+FSA+QL+ LE F RT YPDI+ RE LA T L E+R+QVWF NRRA+ R+Q
Sbjct: 679 QRRSRTTFSADQLEELERCFERTHYPDIYTREELAQRTRLTEARVQVWFSNRRARWRKQM 858
Query: 146 GKSFQPLARP 155
P P
Sbjct: 859 AAQQLPAIHP 888
>gb|S76899.1|S76899 SpOtx=orthodenticle-related protein [Strongylocentrotus purpuratus,
mRNA, 3198 nt]
Length = 3198
Score = 79.3 bits (194), Expect = 2e-13
Identities = 37/59 (62%), Positives = 47/59 (78%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F RTRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 540 QRRERTTFTRAQLDVLETLFSRTRYPDIFMREEVAMKINLPESRVQVWFKNRRAKCRQQ 716
>gb|AY040536.1| Schistocerca americana pairberry 2 transcription factor (pby2)
mRNA, partial cds
Length = 1156
Score = 79.0 bits (193), Expect = 3e-13
Identities = 38/65 (58%), Positives = 48/65 (73%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+FS +QL+ LE F+RT+YPD++ RE LA T L E+RIQVWF NRRA+ R+
Sbjct: 401 QRRSRTTFSGDQLETLERAFQRTQYPDVYTREELARRTGLSEARIQVWFSNRRARWRKHC 580
Query: 146 GKSFQ 150
G S Q
Sbjct: 581 GASQQ 595
>gb|AF232676.1|AF232676 Sus scrofa prophet of pit-1 (Prop-1) mRNA, complete cds
Length = 1721
Score = 79.0 bits (193), Expect = 3e-13
Identities = 50/109 (45%), Positives = 59/109 (53%), Gaps = 7/109 (6%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
+RR RT+FS QL+ LE F R +YPDI RE LA T L E+RIQVWFQNRRAK R+Q
Sbjct: 537 RRRHRTTFSPAQLEQLESAFGRNQYPDIWAREGLARDTGLSEARIQVWFQNRRAKQRKQE 716
Query: 146 GKSFQPLARPEIILNHCAPGTETKCL--KPQLPLEV-----DVNCLPEP 187
QPLA H +P T + L P P + C P P
Sbjct: 717 RSLLQPLA-------HLSPATFSGFLPEPPACPYSYPTPPPPMTCFPHP 842
>ref|NM_006261.1| Homo sapiens prophet of Pit1, paired-like homeodomain transcription
factor (PROP1), mRNA
Length = 681
Score = 79.0 bits (193), Expect = 3e-13
Identities = 47/102 (46%), Positives = 53/102 (51%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
+RR RT+FS QL+ LE F R +YPDI RE LA T L E+RIQVWFQNRRAK R+Q
Sbjct: 205 RRRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRRAKQRKQE 384
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLPLEVDVNCLPEP 187
QPLA T C V C P P
Sbjct: 385 RSLLQPLAHLSPAAFSSFLPESTACPYSYAAPPPPVTCFPHP 510
>gb|AF076215.1|AF076215 Homo sapiens prophet of Pit1 (PROP1) mRNA, complete cds
Length = 1463
Score = 79.0 bits (193), Expect = 3e-13
Identities = 47/102 (46%), Positives = 53/102 (51%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
+RR RT+FS QL+ LE F R +YPDI RE LA T L E+RIQVWFQNRRAK R+Q
Sbjct: 514 RRRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRRAKQRKQE 693
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKPQLPLEVDVNCLPEP 187
QPLA T C V C P P
Sbjct: 694 RSLLQPLAHLSPAAFSSFLPESTACPYSYAAPPPPVTCFPHP 819
>gb|L26509.1|XELORTHOAA Xenopus laevis orthodenticle-A like protein (otxA) mRNA, 5'end
Length = 498
Score = 79.0 bits (193), Expect = 3e-13
Identities = 37/65 (56%), Positives = 49/65 (74%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 304 QRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 483
Query: 146 GKSFQ 150
+ Q
Sbjct: 484 QQQQQ 498
>gb|M14941.1|DROPRD41 D.melanogaster PRD mRNA clone BSH4, homeo box region
Length = 240
Score = 78.6 bits (192), Expect = 4e-13
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = -1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+AEQL+ LE F RT+YPD++ RE LA T L E+RIQVWF NRRA+ R+ S
Sbjct: 180 QRRSRTTFTAEQLEALEGAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHS 1
>emb|Z46972.1|XLOTXNUC X.laevis mRNA for homeobox protein
Length = 867
Score = 78.6 bits (192), Expect = 4e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 112 QRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 288
>gb|AF129932.1|AF129932 Herdmania curvata homeobox protein Otx mRNA, complete cds
Length = 2395
Score = 78.6 bits (192), Expect = 4e-13
Identities = 37/65 (56%), Positives = 49/65 (74%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 352 QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 531
Query: 146 GKSFQ 150
+ Q
Sbjct: 532 QQQQQ 546
>emb|AJ223627.1|TCAJ3627 Tribolium castaneum mRNA for orthodenticle-1 protein
Length = 1959
Score = 78.6 bits (192), Expect = 4e-13
Identities = 37/59 (62%), Positives = 47/59 (78%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL LLE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 503 QRRERTTFTRAQLDLLEGLFAKTRYPDIFMREEVAVKINLPESRVQVWFKNRRAKCRQQ 679
>gb|AY029294.1| Xenopus laevis transcription factor Otx1 (Otx1) mRNA, complete cds
Length = 2174
Score = 78.6 bits (192), Expect = 4e-13
Identities = 37/65 (56%), Positives = 49/65 (74%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 266 QRRERTTFTRSQLDVLESLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 445
Query: 146 GKSFQ 150
+ Q
Sbjct: 446 QQQQQ 460
>dbj|D84062.1|D84062 Halocynthia roretzi mRNA for otx/orthodenticle related
homeoprotein, complete cds
Length = 2701
Score = 78.6 bits (192), Expect = 4e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 395 QRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 571
>emb|X68883.1|MMOTX1 M.musculus Otx1 mRNA
Length = 204
Score = 78.6 bits (192), Expect = 4e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 22 QRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 198
>gb|U19813.1|XLXOTX2S1 Xenopus laevis homeobox protein orthodenticle 2 (Xotx2) mRNA,
complete cds
Length = 1264
Score = 78.6 bits (192), Expect = 4e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 324 QRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 500
>ref|NM_131251.1| Danio rerio orthodenticle homolog 2 (otx2), mRNA
Length = 2161
Score = 78.2 bits (191), Expect = 5e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 375 QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 551
>gb|U14592.1|DRU14592 Danio rerio orthodenticle-related protein 1 (zOtx2) mRNA, complete
cds
Length = 2161
Score = 78.2 bits (191), Expect = 5e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 375 QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 551
>ref|NM_075472.1| Caenorhabditis elegans
Length = 918
Score = 78.2 bits (191), Expect = 5e-13
Identities = 36/59 (61%), Positives = 48/59 (81%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL++LE F +TRYPDI +RE +A LPESR+QVWF+NRRAK+R+Q
Sbjct: 436 QRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAKARQQ 612
>gb|BC017609.1|BC017609 Mus musculus, clone MGC:27657 IMAGE:4527414, mRNA, complete cds
Length = 1737
Score = 78.2 bits (191), Expect = 5e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 444 QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 620
>ref|NM_075473.1| Caenorhabditis elegans
Length = 1077
Score = 78.2 bits (191), Expect = 5e-13
Identities = 36/59 (61%), Positives = 48/59 (81%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL++LE F +TRYPDI +RE +A LPESR+QVWF+NRRAK+R+Q
Sbjct: 595 QRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAKARQQ 771
>ref|NM_021728.1| Homo sapiens orthodenticle homolog 2 (Drosophila) (OTX2), mRNA
Length = 894
Score = 78.2 bits (191), Expect = 5e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 136 QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 312
>gb|AF305499.1|AF305499 Ciona intestinalis Otx mRNA, complete cds
Length = 1692
Score = 78.2 bits (191), Expect = 5e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 363 QRRERTTFTRAQLDILEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 539
>dbj|AB057732.1|AB057732 Ciona savignyi Cs-OTX mRNA, complete cds
Length = 2393
Score = 78.2 bits (191), Expect = 5e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 353 QRRERTTFTRAQLDILEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 529
>gb|AF381629.1|AF381629 Caenorhabditis elegans homeodomain protein TTX-1 mRNA, partial cds
Length = 751
Score = 78.2 bits (191), Expect = 5e-13
Identities = 36/59 (61%), Positives = 48/59 (81%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL++LE F +TRYPDI +RE +A LPESR+QVWF+NRRAK+R+Q
Sbjct: 567 QRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAKARQQ 743
>gb|AF381627.1|AF381627 Caenorhabditis elegans clone yk345e3 homeodomain protein TTX-1
mRNA, partial cds
Length = 1340
Score = 78.2 bits (191), Expect = 5e-13
Identities = 36/59 (61%), Positives = 48/59 (81%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL++LE F +TRYPDI +RE +A LPESR+QVWF+NRRAK+R+Q
Sbjct: 419 QRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAKARQQ 595
>emb|AJ000939.1|OLJ000939 Oryzias latipes, Otx2 gene
Length = 543
Score = 78.2 bits (191), Expect = 5e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 112 QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 288
>dbj|D26173.1|ZEFOTX2 Zebrafish otx2 mRNA for otx homeoprotein, complete cds
Length = 948
Score = 78.2 bits (191), Expect = 5e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 190 QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 366
>emb|X68884.1|MMOTX2 M.musculus Otx2 mRNA
Length = 204
Score = 78.2 bits (191), Expect = 5e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 22 QRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 198
>gb|AF381628.1|AF381628 Caenorhabditis elegans clone yk51g10 homeodomain protein TTX-1
mRNA, partial cds
Length = 1469
Score = 78.2 bits (191), Expect = 5e-13
Identities = 36/59 (61%), Positives = 48/59 (81%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL++LE F +TRYPDI +RE +A LPESR+QVWF+NRRAK+R+Q
Sbjct: 540 QRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQVWFKNRRAKARQQ 716
>ref|NM_059845.1| homeobox protein (otd subfamily)
Length = 1041
Score = 78.2 bits (191), Expect = 5e-13
Identities = 38/65 (58%), Positives = 45/65 (68%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+F+ QL LE F +T YPD++ RE LAA LPE R+QVWFQNRRAK RRQ
Sbjct: 388 QRRNRTTFTTFQLHALEAAFDKTHYPDVYARETLAAKVQLPEVRVQVWFQNRRAKFRRQE 567
Query: 146 GKSFQ 150
+ Q
Sbjct: 568 KQDCQ 582
>ref|NM_078536.1| Drosophila melanogaster ocelliless (oc), mRNA
Length = 3809
Score = 77.8 bits (190), Expect = 6e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 996 QRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 1172
>gb|AF099746.1|AF099746 Petromyzon marinus Otx mRNA, complete cds
Length = 2456
Score = 77.8 bits (190), Expect = 6e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 261 QRRERTTFTRAQLDVLESLFSKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 437
>emb|X58983.1|DMOTD D.melanogaster otd gene for orthodenticle protein
Length = 3809
Score = 77.8 bits (190), Expect = 6e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 996 QRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 1172
>emb|AJ223614.1|TRC223614 Tribolium castaneum mRNA for orthodenticle-2 protein
Length = 1708
Score = 77.8 bits (190), Expect = 6e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 427 QRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 603
>gb|AF081350.1|AF081350 Xenopus laevis homeodomain protein Mix.3 mRNA, complete cds
Length = 1597
Score = 77.8 bits (190), Expect = 6e-13
Identities = 37/62 (59%), Positives = 43/62 (68%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRRKRT +S +L +LE F+ YPDIH RE LA +PESR+QVWFQNRRAK RR
Sbjct: 328 QRRKRTFYSQNKLDVLEQFFQTNMYPDIHHREELAKRIYIPESRVQVWFQNRRAKERRDK 507
Query: 146 GK 147
K
Sbjct: 508 AK 513
>dbj|AB028220.1|AB028220 Ptychodera flava mRNA for Pf-Otx, complete cds
Length = 3625
Score = 77.8 bits (190), Expect = 6e-13
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 577 QRRERTTFTRAQLDVLESLFSKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 753
>gb|AF068263.1|AF068263 Xenopus laevis Mix-like endodermal regulator (Mixer) mRNA, complete
cds
Length = 1457
Score = 77.8 bits (190), Expect = 6e-13
Identities = 37/62 (59%), Positives = 43/62 (68%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRRKRT +S +L +LE F+ YPDIH RE LA +PESR+QVWFQNRRAK RR
Sbjct: 314 QRRKRTFYSQNKLDVLEQFFQTNMYPDIHHREELAKRIYIPESRVQVWFQNRRAKERRDK 493
Query: 146 GK 147
K
Sbjct: 494 AK 499
>ref|NM_077459.1| homeobox protein (otd subfamily)
Length = 1089
Score = 77.0 bits (188), Expect = 1e-12
Identities = 43/76 (56%), Positives = 48/76 (62%), Gaps = 1/76 (1%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+FSA QL LE VF RT YPD+ RE LA L E+R+QVWFQNRRAK R+Q
Sbjct: 349 QRRYRTTFSAFQLDELEKVFARTHYPDVFTREELATRVQLTEARVQVWFQNRRAKYRKQE 528
Query: 146 GKS-FQPLARPEIILN 160
S P P I N
Sbjct: 529 RSSTHHPYQAPMSIPN 576
>dbj|AB041043.1|AB041043 Stichopus japonicus Sj-Otx mRNA for orthodenticle, complete cds
Length = 1438
Score = 77.0 bits (188), Expect = 1e-12
Identities = 36/59 (61%), Positives = 47/59 (79%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 650 QRRERTTFTRAQLDVLEDLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQ 826
>gb|AF079560.1|AF079560 Xenopus laevis homeobox protein BIX2 (Bix2) mRNA, complete cds
Length = 1533
Score = 77.0 bits (188), Expect = 1e-12
Identities = 38/65 (58%), Positives = 45/65 (68%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQSG 146
RR+RT +S L LE F+ YPDIH RE LA LPESRIQVWFQNRR+K+RRQ
Sbjct: 305 RRRRTVYSPSDLARLEQYFQTNMYPDIHQREELARQMGLPESRIQVWFQNRRSKARRQGS 484
Query: 147 KSFQP 151
+S +P
Sbjct: 485 RSTKP 499
>ref|NM_131304.1| Danio rerio paired box gene 6a (pax6a), mRNA
Length = 2809
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1218 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1391
>emb|X63183.1|BRPAX6 B.rerio pax-6 mRNA
Length = 2809
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1218 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1391
>gb|U76386.1|XLU76386 Xenopus laevis paired-type homeodomain (Pax-6) mRNA, complete cds
Length = 2009
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1174 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1347
>gb|S69508.1|S69508 Pax-6=transcription factor [chickens, embryos, mRNA Partial, 912
nt]
Length = 912
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 31 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 204
>gb|U77532.1|XLU77532 Xenopus laevis Pax6 mRNA, complete cds
Length = 2487
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1203 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1376
>gb|AF154555.1|AF154555 Xenopus laevis paired domain transcription factor variant A (Pax-6)
mRNA, Pax-6-2 allele, complete cds
Length = 2211
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1060 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1233
>emb|Y07547.1|AFPAX6C72 Astyanax fasciatus mRNA for PAX-6 protein, clone cave 7-2
Length = 2211
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1339 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1512
>dbj|AB002408.1|AB002408 Oryzias sp. mRNA for mdkPax-6, partial cds
Length = 638
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 250 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 423
>emb|X61389.1|BRPAXZFA B.rerio mRNA for Pax[zf-a]
Length = 2738
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1153 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1326
>gb|AF079559.1|AF079559 Xenopus laevis homeobox protein BIX1 (Bix1) mRNA, complete cds
Length = 1504
Score = 76.6 bits (187), Expect = 1e-12
Identities = 38/62 (61%), Positives = 43/62 (69%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQSG 146
RRKRT +S L LE FR YPDIH RE +A LPESRIQVWFQNRR+K+RRQ
Sbjct: 304 RRKRTVYSPSDLARLEQYFRTNMYPDIHQREEMARQMGLPESRIQVWFQNRRSKARRQGS 483
Query: 147 KS 148
+S
Sbjct: 484 RS 489
>emb|AJ000938.1|OLJ000938 Oryzias latipes, Pax6 gene
Length = 2178
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1146 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1319
>gb|AY047583.1| Homo sapiens paired box protein PAX6 (PAX6) mRNA, complete cds
Length = 1399
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 761 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 934
>gb|AY064175.1| Mus musculus Pax6 paired-less isoform mRNA, complete cds
Length = 1125
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 381 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 554
>emb|Y07546.1|AFPAX6C23 Astyanax fasciatus mRNA for PAX-6 protein, clone cave 2-3
Length = 2065
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1193 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1366
>gb|AF154552.1|AF154552 Xenopus laevis paired domain transcription factor variant B (Pax-6)
mRNA, Pax-6-3 allele, complete cds
Length = 1882
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 880 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1053
>ref|NM_013627.1| Mus musculus paired box gene 6 (Pax6), mRNA
Length = 2481
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 835 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1008
>ref|NM_021855.1| Rattus norvegicus cone-rod homeobox protein (Crx), mRNA
Length = 900
Score = 76.6 bits (187), Expect = 1e-12
Identities = 36/72 (50%), Positives = 51/72 (70%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL+ LE +F +T+YPD++ RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 115 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQR 294
Query: 146 GKSFQPLARPEI 157
+ Q P +
Sbjct: 295 QQQKQQQQPPGV 330
>gb|AF135838.1|AF135838 Rattus norvegicus homeodomain protein CRX (Crx) mRNA, complete cds
Length = 900
Score = 76.6 bits (187), Expect = 1e-12
Identities = 36/72 (50%), Positives = 51/72 (70%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL+ LE +F +T+YPD++ RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 115 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQR 294
Query: 146 GKSFQPLARPEI 157
+ Q P +
Sbjct: 295 QQQKQQQQPPGV 330
>emb|X63963.1|MMPAX6PBP M.musculus pax-6 mRNA for paired box protein
Length = 2481
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 835 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1008
>dbj|AB021129.1|AB021129 Rattus norvegicus Crx mRNA for cone-rod homeobox protein, complete
cds
Length = 900
Score = 76.6 bits (187), Expect = 1e-12
Identities = 36/72 (50%), Positives = 51/72 (70%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL+ LE +F +T+YPD++ RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 115 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQR 294
Query: 146 GKSFQPLARPEI 157
+ Q P +
Sbjct: 295 QQQKQQQQPPGV 330
>emb|AJ223440.1|BFL223440 Branchiostoma floridae Pax6 gene (AmphiPax6) clone 12.1
Length = 4596
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1220 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1393
>gb|BC011272.1|BC011272 Mus musculus, clone MGC:18454 IMAGE:4008490, mRNA, complete cds
Length = 2580
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1202 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1375
>ref|NM_001604.2| Homo sapiens paired box gene 6 (aniridia, keratitis) (PAX6), mRNA
Length = 1740
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1090 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1263
>ref|NM_131641.1| Danio rerio paired box gene 6b (pax6b), mRNA
Length = 1733
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 948 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1121
>gb|AF061252.1|AF061252 Danio rerio Pax-family transcription factor 6.2 (pax6.2) mRNA,
complete cds
Length = 1733
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 948 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1121
>gb|U64513.1|XLU64513 Xenopus laevis Xpax6 mRNA, complete cds
Length = 1270
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 631 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 804
>gb|AF443223.1|AF443223 Mus musculus PAX6 mRNA, partial cds, alternatively spliced
Length = 1058
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 571 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 744
>gb|AF081351.1|AF081351 Xenopus laevis homeodomain protein Mix.4 mRNA, complete cds
Length = 1443
Score = 76.6 bits (187), Expect = 1e-12
Identities = 38/62 (61%), Positives = 43/62 (69%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQSG 146
RRKRT +S L LE FR YPDIH RE +A LPESRIQVWFQNRR+K+RRQ
Sbjct: 256 RRKRTVYSPSDLARLEQYFRTNMYPDIHQREEMARQMGLPESRIQVWFQNRRSKARRQGS 435
Query: 147 KS 148
+S
Sbjct: 436 RS 441
>gb|S74393.1|S74393 Pax-6 [rats, small eye rSey, mRNA Partial Mutant, 1292 nt]
Length = 1292
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 353 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 526
>gb|U77178.1|TAU77178 Triturus alpestris paired box homeodomain protein TPAX6 (Pax6)
mRNA, partial cds
Length = 699
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 205 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 378
>gb|AF154553.1|AF154553 Xenopus laevis paired domain transcription factor variant B (Pax-6)
mRNA, Pax-6-1 allele, complete cds
Length = 1980
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 997 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1170
>gb|AF154554.1|AF154554 Xenopus laevis paired domain transcription factor variant B (Pax-6)
mRNA, Pax-6-4 allele, partial cds
Length = 1207
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 711 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 884
>emb|X70475.1|CCPAX C. coturnix mRNA for paired box and homeobox gene
Length = 2509
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1007 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1180
>emb|AJ292077.1|MMU292077 Mus musculus partial mRNA for paired box protein (Pax6 gene), clone
PAX6-9Neu
Length = 1462
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 775 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 948
>emb|Y07548.1|AFPAX6E24 Astyanax fasciatus mRNA for PAX-6 protein, clone epigean 2-4
Length = 2053
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1181 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1354
>dbj|AB066290.1|AB066290 Leucopsarion petersii otx3 gene for transcriptional factor,
complete cds
Length = 1760
Score = 76.6 bits (187), Expect = 1e-12
Identities = 36/63 (57%), Positives = 47/63 (74%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL +LE +F +TRYPDI +RE +A LPESR+ VWF+NRRAK R+Q
Sbjct: 404 QRRERTTFTRTQLDILESLFAKTRYPDIFMREEVALKINLPESRVXVWFKNRRAKCRQQQ 583
Query: 146 GKS 148
S
Sbjct: 584 QSS 592
>gb|AF154557.1|AF154557 Xenopus laevis paired domain transcription factor variant B (Pax-6)
mRNA, Pax-6-2 allele, complete cds
Length = 2028
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1018 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1191
>gb|AF457141.1|AF457141 Mus musculus Pax6 paired-less isoform mRNA, complete cds
Length = 982
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 237 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 410
>gb|U67887.1|XLU67887 Xenopus laevis XLPAX6 (Pax6) mRNA, complete cds
Length = 1643
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 868 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1041
>gb|M77844.1|HUMOCLHMB H.sapiens oculorhombin (aniridia) mRNA, complete cds
Length = 1643
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 993 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1166
>emb|AJ307468.1|MMU307468 Mus musculus mRNA for paired box protein (Pax-6 gene)
Length = 1469
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 782 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 955
>emb|Y19199.1|MMUY19199 Mus musculus partial Pax-6 gene for paired box protein, PAX6-7NEU
Length = 1469
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 782 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 955
>emb|Y19198.1|MMUY19198 Mus musculus partial Pax-6 gene for paired box protein, clone
PAX6-6NEU
Length = 1469
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 782 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 955
>emb|Y19197.1|MMUY19197 Mus musculus partial Pax-6 gene for paired box protein, clone
PAX6-5NEU
Length = 1469
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 782 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 955
>emb|Y19195.1|MMUY19195 Mus musculus partial Pax-6 gene for paired box protein, clone
PAX6-3NEU
Length = 1470
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 783 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 956
>gb|AF169414.1|AF169414 Ambystoma mexicanum paired-box transcription factor -+ isoform
(Pax6) mRNA, partial cds
Length = 1963
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 625 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 798
>dbj|D87837.1|D87837 Gallus gallus mRNA for PAX6 protein, complete cds
Length = 1964
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1002 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1175
>emb|AJ223441.1|BFL223441 Branchiostoma floridae Pax6 gene (AmphiPax6), clone J2
Length = 4654
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1285 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1458
>ref|NM_013001.1| Rattus norvegicus Paired box homeotic gene 6 (Pax6), mRNA
Length = 2550
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1011 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1184
>gb|AF169412.1|AF169412 Ambystoma mexicanum paired-box transcription factor ++ isoform
(Pax6) mRNA, partial cds
Length = 2005
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 667 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 840
>gb|U69644.1|RNU69644 Rattus norvegicus Pax-6 mRNA, comlete cds
Length = 2550
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1011 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1184
>gb|AF154556.1|AF154556 Xenopus laevis paired domain transcription factor variant A (Pax-6)
mRNA, Pax-6-1 allele, complete cds
Length = 2213
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1062 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1235
>ref|NM_000280.1| Homo sapiens paired box gene 6 (aniridia, keratitis) (PAX6), mRNA
Length = 1698
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1048 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1221
>gb|M93650.1|HUMPAX6AN Human paired box gene (PAX6) homologue, complete cds
Length = 1698
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1048 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1221
>dbj|D88741.1|D88741 Cynops pyrrhogaster mRNA for PAX6 LL, PAX6 SL, PAX6 LS, PAX6 SS
Length = 2417
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 853 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1026
>emb|AJ223444.1|BFL223444 Branchiostoma floridae Pax6 gene (AmphiPax6), clone 12.2
Length = 2884
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1322 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1495
>gb|AF169413.1|AF169413 Ambystoma mexicanum paired-box transcription factor +- isoform
(Pax6) mRNA, partial cds
Length = 1854
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 667 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 840
>gb|BC011953.1|BC011953 Homo sapiens, Similar to paired box gene 6 (aniridia, keratitis),
clone MGC:17209 IMAGE:3880468, mRNA, complete cds
Length = 1631
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 972 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1145
>gb|AF169415.1|AF169415 Ambystoma mexicanum paired-box transcription factor -- isoform
(Pax6) mRNA, partial cds
Length = 1812
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 625 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 798
>gb|M77842.1|MUSSEYA Mus musculus oculorhombin (Sey) mRNA, complete cds
Length = 1624
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 501 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 674
>emb|AJ223442.1|BFL223442 Branchiostoma floridae Pax6 gene (AmphiPax6), clone 4.1
Length = 4041
Score = 76.6 bits (187), Expect = 1e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1256 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1429
>ref|NM_016307.2| Homo sapiens paired related homeobox protein (PRX2), mRNA
Length = 1110
Score = 76.3 bits (186), Expect = 2e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 340 QRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRR 513
>gb|AF061970.1|AF061970 Homo sapiens paired related homeobox protein (PRX2) mRNA, complete
cds
Length = 1110
Score = 76.3 bits (186), Expect = 2e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 340 QRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRR 513
>dbj|AK018615.1|AK018615 Mus musculus adult male cecum cDNA, RIKEN full-length enriched
library, clone:9130012O13:Homeobox domain containing
protein, full insert sequence
Length = 1793
Score = 76.3 bits (186), Expect = 2e-12
Identities = 35/59 (59%), Positives = 47/59 (79%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+F+ EQLQ LE +F T YPDIH+R +LA+ LPE+R+Q+WFQN+RAK R+Q
Sbjct: 700 KRRVRTTFTTEQLQELEKLFHFTHYPDIHVRSQLASRINLPEARVQIWFQNQRAKWRKQ 876
>dbj|AK025181.1|AK025181 Homo sapiens cDNA: FLJ21528 fis, clone COL05977
Length = 3403
Score = 76.3 bits (186), Expect = 2e-12
Identities = 34/59 (57%), Positives = 46/59 (77%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+F+ EQL LE +F T YPD+H+R +LAA LPE+R+Q+WFQN+RAK R+Q
Sbjct: 1196 KRRVRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQIWFQNQRAKWRKQ 1372
>gb|AF079562.1|AF079562 Xenopus laevis homeobox protein BIX4 (Bix4) mRNA, complete cds
Length = 1461
Score = 76.3 bits (186), Expect = 2e-12
Identities = 43/102 (42%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQSG 146
RR+RT +S L LE F+ YPDIH RE +A LPESR+QVWFQNRR+K+RRQ
Sbjct: 277 RRRRTVYSPSDLARLEQNFQTNMYPDIHQREEMARQMGLPESRVQVWFQNRRSKARRQGS 456
Query: 147 KSFQ-----------PLARPEIILNHCAPGTETKCLKPQLPL 177
+S + P+ P N +P + + L Q PL
Sbjct: 457 RSTKPAGVGDYYNSTPMYNPAPTANCTSPVAQQRMLSYQQPL 582
>gb|BC016502.1|BC016502 Mus musculus, cone-rod homeobox containing gene, clone MGC:25283
IMAGE:4527863, mRNA, complete cds
Length = 2845
Score = 76.3 bits (186), Expect = 2e-12
Identities = 36/70 (51%), Positives = 50/70 (71%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL+ LE +F +T+YPD++ RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 202 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQR 381
Query: 146 GKSFQPLARP 155
+ Q P
Sbjct: 382 QQQKQQQQPP 411
>ref|XM_038589.1| Homo sapiens similar to Homeobox domain containing protein~data
source:InterPro, source key:IPR001356,
evidence:ISS~putative (LOC91464), mRNA
Length = 3381
Score = 76.3 bits (186), Expect = 2e-12
Identities = 34/59 (57%), Positives = 46/59 (77%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+F+ EQL LE +F T YPD+H+R +LAA LPE+R+Q+WFQN+RAK R+Q
Sbjct: 1195 KRRVRTTFTTEQLHELEKIFHFTHYPDVHIRSQLAARINLPEARVQIWFQNQRAKWRKQ 1371
>ref|NM_000554.1| Homo sapiens cone-rod homeobox (CRX), mRNA
Length = 900
Score = 76.3 bits (186), Expect = 2e-12
Identities = 36/70 (51%), Positives = 50/70 (71%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL+ LE +F +T+YPD++ RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 115 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQR 294
Query: 146 GKSFQPLARP 155
+ Q P
Sbjct: 295 QQQKQQQQPP 324
>ref|NM_007770.1| Mus musculus cone-rod homeobox containing gene (Crx), mRNA
Length = 1594
Score = 76.3 bits (186), Expect = 2e-12
Identities = 36/70 (51%), Positives = 50/70 (71%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL+ LE +F +T+YPD++ RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 241 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQR 420
Query: 146 GKSFQPLARP 155
+ Q P
Sbjct: 421 QQQKQQQQPP 450
>gb|BC016664.1|BC016664 Homo sapiens, cone-rod homeobox, clone MGC:9387 IMAGE:3869862,
mRNA, complete cds
Length = 2376
Score = 76.3 bits (186), Expect = 2e-12
Identities = 36/70 (51%), Positives = 50/70 (71%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL+ LE +F +T+YPD++ RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 254 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQR 433
Query: 146 GKSFQPLARP 155
+ Q P
Sbjct: 434 QQQKQQQQPP 463
>gb|BC014645.1|BC014645 Homo sapiens, Similar to paired related homeobox protein, clone
MGC:19843 IMAGE:4553935, mRNA, complete cds
Length = 1327
Score = 76.3 bits (186), Expect = 2e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 537 QRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRR 710
>gb|U77615.1|MMU77615 Mus musculus homeodomain protein (crx) mRNA, complete cds
Length = 1594
Score = 76.3 bits (186), Expect = 2e-12
Identities = 36/70 (51%), Positives = 50/70 (71%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL+ LE +F +T+YPD++ RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 241 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQR 420
Query: 146 GKSFQPLARP 155
+ Q P
Sbjct: 421 QQQKQQQQPP 450
>gb|AF024711.1|AF024711 Homo sapiens cone rod homeobox protein (CRX) gene, complete cds
Length = 1445
Score = 76.3 bits (186), Expect = 2e-12
Identities = 36/70 (51%), Positives = 50/70 (71%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL+ LE +F +T+YPD++ RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 150 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQR 329
Query: 146 GKSFQPLARP 155
+ Q P
Sbjct: 330 QQQKQQQQPP 359
>ref|NM_009116.1| Mus musculus paired related homeobox 2 (Prrx2), mRNA
Length = 1221
Score = 76.3 bits (186), Expect = 2e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 447 QRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRR 620
>emb|X52875.1|MMHOMEOS8 Mouse homeobox gene Prx2 mRNA
Length = 1221
Score = 76.3 bits (186), Expect = 2e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 447 QRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRR 620
>gb|AF154123.1|AF154123 Bos taurus cone-rod homeobox mRNA, complete cds
Length = 989
Score = 76.3 bits (186), Expect = 2e-12
Identities = 36/70 (51%), Positives = 50/70 (71%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL+ LE +F +T+YPD++ RE +A LPESR+QVWF+NRRAK R+Q
Sbjct: 197 QRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQR 376
Query: 146 GKSFQPLARP 155
+ Q P
Sbjct: 377 QQQKQQQQPP 406
>emb|Y19196.1|MMUY19196 Mus musculus partial Pax-6 gene for paired box protein, clone
PAX6-4NEU
Length = 1469
Score = 76.3 bits (186), Expect = 2e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 782 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFPNRRAKWRRE 955
>dbj|AK019971.1|AK019971 Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:5730524N22:paired related
homeobox 2, full insert sequence
Length = 1071
Score = 76.3 bits (186), Expect = 2e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 327 QRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRR 500
>gb|U81600.1|HSU81600 Homo sapiens paired-like homeodomain protein PRX2 mRNA, partial cds
Length = 813
Score = 76.3 bits (186), Expect = 2e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 43 QRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRR 216
>emb|Y09975.1|PMPAX6 P.mammillata mRNA for Pax-6
Length = 1741
Score = 76.3 bits (186), Expect = 2e-12
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSFS EQ++ LE F RT YPD+ RERLA+ LPE+RIQVWF NRRAK RR+
Sbjct: 790 QRNRTSFSQEQVEALEKEFERTHYPDVFARERLASKIDLPEARIQVWFSNRRAKWRRE 963
>emb|X79695.1|GGPRX2 G.gallus Prx-2 (S8) mRNA
Length = 849
Score = 76.3 bits (186), Expect = 2e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 46 QRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRR 219
>gb|AC011066.5|AC011066 Drosophila melanogaster, chromosome 2L, region 33B-33C, BAC clone
BACR02B06, complete sequence
Length = 174314
Score = 75.9 bits (185), Expect = 2e-12
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = -2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR RT+FSA QL LE F RT+YPDI+ RE LA T L E+RIQVWF NRRA+ R+Q
Sbjct: 75421 QRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQ 75245
>ref|NM_078832.1| Drosophila melanogaster paired (prd), mRNA
Length = 2348
Score = 75.9 bits (185), Expect = 2e-12
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR RT+FSA QL LE F RT+YPDI+ RE LA T L E+RIQVWF NRRA+ R+Q
Sbjct: 806 QRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQ 982
>gb|AY059447.1| Drosophila melanogaster GH22686 full length cDNA
Length = 2348
Score = 75.9 bits (185), Expect = 2e-12
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR RT+FSA QL LE F RT+YPDI+ RE LA T L E+RIQVWF NRRA+ R+Q
Sbjct: 806 QRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQ 982
>gb|M14548.1|DROPRD D.melanogaster paired gene (prd) encoding a segmentation protein,
complete cds
Length = 3042
Score = 75.9 bits (185), Expect = 2e-12
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR RT+FSA QL LE F RT+YPDI+ RE LA T L E+RIQVWF NRRA+ R+Q
Sbjct: 1489 QRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQ 1665
>ref|NM_008936.1| Mus musculus paired like homeodomain factor 1 (Prop1), mRNA
Length = 1000
Score = 75.9 bits (185), Expect = 2e-12
Identities = 39/68 (57%), Positives = 47/68 (68%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
+RR RT+F+ QL+ LE F R +YPDI RE LA T L E+RIQVWFQNRRAK R+Q
Sbjct: 424 RRRHRTTFNPAQLEQLESAFGRNQYPDIWAREGLAQDTGLSEARIQVWFQNRRAKQRKQE 603
Query: 146 GKSFQPLA 153
QP+A
Sbjct: 604 RSLLQPIA 627
>gb|U77946.1|MMU77946 Mus musculus pituitary specific homeodomain factor (Prop-1) mRNA,
complete cds
Length = 1000
Score = 75.9 bits (185), Expect = 2e-12
Identities = 39/68 (57%), Positives = 47/68 (68%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
+RR RT+F+ QL+ LE F R +YPDI RE LA T L E+RIQVWFQNRRAK R+Q
Sbjct: 424 RRRHRTTFNPAQLEQLESAFGRNQYPDIWAREGLAQDTGLSEARIQVWFQNRRAKQRKQE 603
Query: 146 GKSFQPLA 153
QP+A
Sbjct: 604 RSLLQPIA 627
>gb|AE003634.1|AE003634 Drosophila melanogaster genomic scaffold 142000013386055 section 27 of
63, complete sequence
Length = 264752
Score = 75.9 bits (185), Expect = 2e-12
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = -1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR RT+FSA QL LE F RT+YPDI+ RE LA T L E+RIQVWF NRRA+ R+Q
Sbjct: 259589 QRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQ 259413
>dbj|AK008428.1|AK008428 Mus musculus adult male small intestine cDNA, RIKEN full-length
enriched library, clone:2010204A19:paired related
homeobox 1, full insert sequence
Length = 1332
Score = 75.5 bits (184), Expect = 3e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 125 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRR 298
>ref|NM_011127.1| Mus musculus paired related homeobox 1 (Prrx1), mRNA
Length = 949
Score = 75.5 bits (184), Expect = 3e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 421 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRR 594
>emb|X59725.1|MMHOBOXG M.musculus mRNA for homeobox gene
Length = 949
Score = 75.5 bits (184), Expect = 3e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 421 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRR 594
>dbj|D88738.1|D88738 African clawed frog mRNA for Xenopus Pax-6 short, partial cds
Length = 1112
Score = 75.5 bits (184), Expect = 3e-12
Identities = 36/58 (62%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
++ RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 631 QKNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 804
>gb|M95929.1|HUMPHOX1A Human homeobox protein (PHOX1) mRNA, 3' end
Length = 1433
Score = 75.5 bits (184), Expect = 3e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 226 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRR 399
>dbj|D88737.1|D88737 African clawed frog mRNA for Xenopus Pax-6 long, partial cds
Length = 1263
Score = 75.5 bits (184), Expect = 3e-12
Identities = 36/58 (62%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
++ RTSF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 631 QKNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 804
>dbj|AB008834.1|AB008834 Dugesia japonica DjotxA mRNA, complete cds
Length = 2183
Score = 75.5 bits (184), Expect = 3e-12
Identities = 33/59 (55%), Positives = 48/59 (80%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
RR RT+F+ +QL++LEL F + RYPDI LR+ +++ LPESR+QVWF+NRRAK R+++
Sbjct: 774 RRDRTTFTRQQLEILELHFEKNRYPDIFLRDEISSKINLPESRVQVWFKNRRAKERQKN 950
>gb|AF160992.1|AF160992 Podocoryne carnea (jellyfish) homeodomain protein Otx (Otx) mRNA,
complete cds
Length = 850
Score = 75.5 bits (184), Expect = 3e-12
Identities = 41/88 (46%), Positives = 56/88 (63%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR+RT+F+ QL++LE +F +T YPDI +RE A LPESR+QVWF+NRRAK RQ
Sbjct: 181 QRRERTTFTKSQLEILEDLFAKTHYPDIFMREEAARKINLPESRVQVWFKNRRAK-HRQK 357
Query: 146 GKSFQPLARPEIILNHCAPGTETKCLKP 173
K + + N + +ET +KP
Sbjct: 358 AKQDKEKTTKKATTN--STSSETSDIKP 435
>gb|S82911.1|S82911 rHox=rHox protein [rats, ROS 17/2.8 osteosarcoma cell line, mRNA,
1375 nt]
Length = 1375
Score = 75.5 bits (184), Expect = 3e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 608 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRR 781
>dbj|AK019503.1|AK019503 Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched
library, clone:4632419J16:paired related homeobox 1,
full insert sequence
Length = 2858
Score = 75.5 bits (184), Expect = 3e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 106 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRR 279
>dbj|D13433.1|CHKPRX1 Gallus gallus paired-related homeobox mRNA, complete cds
Length = 1084
Score = 75.5 bits (184), Expect = 3e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 512 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRR 685
>gb|L06502.1|MUSMHOX Mus musculus MHox protein mRNA, complete cds
Length = 1066
Score = 75.5 bits (184), Expect = 3e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 460 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRR 633
>dbj|AB061220.1|AB061220 Lampetra japonica mRNA for paired box transcription factor Pax6,
complete cds
Length = 2742
Score = 75.5 bits (184), Expect = 3e-12
Identities = 36/58 (62%), Positives = 44/58 (75%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+ EQ++ LE F RT YPD+ RERLA+ LPE+RIQVWF NRRAK RR+
Sbjct: 1106 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLASKIDLPEARIQVWFSNRRAKWRRE 1279
>gb|S69088.1|S69088 gMHox=homeobox [chickens, stage 17 embryo, heart, mRNA, 895 nt]
Length = 895
Score = 75.5 bits (184), Expect = 3e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 310 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRR 483
>ref|NM_079139.1| Drosophila melanogaster gooseberry (gsb), mRNA
Length = 1284
Score = 75.5 bits (184), Expect = 3e-12
Identities = 36/70 (51%), Positives = 47/70 (66%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQS 145
QRR RT+FS +Q+ LE +F RT+YPD++ RE LA T L E+R+QVWF NRRA+ R+Q
Sbjct: 553 QRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQL 732
Query: 146 GKSFQPLARP 155
P P
Sbjct: 733 NTQQVPSFAP 762
>ref|NM_006902.2| Homo sapiens paired mesoderm homeo box 1 (PMX1), transcript variant
pmx-1a, mRNA
Length = 3500
Score = 75.5 bits (184), Expect = 3e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 1317 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRR 1490
>gb|U03873.1|MMU03873 Mus musculus homeobox (Pmx) mRNA, complete cds
Length = 3359
Score = 75.5 bits (184), Expect = 3e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 1301 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRR 1474
>gb|AF461698.1|AF461698 Gallus gallus paired-related homeobox mRNA, partial cds
Length = 692
Score = 75.5 bits (184), Expect = 3e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 331 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRR 504
>ref|NM_022716.1| Homo sapiens paired mesoderm homeo box 1 (PMX1), transcript variant
pmx-1b, mRNA
Length = 3428
Score = 75.5 bits (184), Expect = 3e-12
Identities = 37/58 (63%), Positives = 43/58 (73%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRR 143
QRR RT+F++ QLQ LE VF RT YPD +RE LA L E+R+QVWFQNRRAK RR
Sbjct: 1317 QRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRR 1490
>gb|M14942.1|DROPRD92 D.melanogaster paired mRNA clone BSH9, homeo box region
Length = 240
Score = 75.1 bits (183), Expect = 4e-12
Identities = 34/59 (57%), Positives = 45/59 (75%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
QRR RT+FS +Q+ LE +F RT+YPD++ RE LA T L E+R+QVWF NRRA+ R+Q
Sbjct: 61 QRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQ 237
>ref|NM_008759.1| Mus musculus OG9 homeobox gene (Og9x), mRNA
Length = 573
Score = 75.1 bits (183), Expect = 4e-12
Identities = 49/110 (44%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQSG 146
RRKRT+FS QL LE VF YPDI RE LA +T LPE++IQVWFQNRRAK R +
Sbjct: 55 RRKRTTFSVGQLVELERVFAARPYPDISTREHLAQVTHLPEAKIQVWFQNRRAK-RIKDR 231
Query: 147 KSFQPLARPEIILNHCA----------PGTETKCLKPQLPLEVDVNCLPE 186
K +R E+ N C+ PGT + L P + C P+
Sbjct: 232 KPGALNSRLELPPNSCSLPDTPQLPWDPGTSSHPLHPTSSAQYTSACPPQ 381
>emb|AJ223443.1|BFL223443 Branchiostoma floridae Pax6 gene (AmphiPax6), clone 4.2
Length = 3010
Score = 75.1 bits (183), Expect = 4e-12
Identities = 36/58 (62%), Positives = 44/58 (75%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R R+SF+ EQ++ LE F RT YPD+ RERLAA LPE+RIQVWF NRRAK RR+
Sbjct: 1331 QRNRSSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 1504
>gb|U14621.1|PLU14621 Paracentrotus lividus Pax-6 (suPax-6) mRNA, complete cds
Length = 5015
Score = 74.7 bits (182), Expect = 5e-12
Identities = 36/58 (62%), Positives = 44/58 (75%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+A+Q++ LE F RT YPD+ RERLA LPE+RIQVWF NRRAK RR+
Sbjct: 1324 QRNRTSFTAQQIEELEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNRRAKWRRE 1497
>ref|XM_002147.4| Homo sapiens aristaless-like homeobox 3 (ALX3), mRNA
Length = 1771
Score = 74.3 bits (181), Expect = 7e-12
Identities = 35/59 (59%), Positives = 47/59 (79%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+FS QL+ LE VF++T YPD++ RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 457 KRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKR 633
>ref|NM_007441.1| Mus musculus aristaless 3 (Alx3), mRNA
Length = 1870
Score = 74.3 bits (181), Expect = 7e-12
Identities = 35/59 (59%), Positives = 47/59 (79%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+FS QL+ LE VF++T YPD++ RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 605 KRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKR 781
>gb|U96109.1|MMU96109 Mus musculus proline-rich transcription factor ALX3 (Alx3) mRNA,
complete cds
Length = 1870
Score = 74.3 bits (181), Expect = 7e-12
Identities = 35/59 (59%), Positives = 47/59 (79%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+FS QL+ LE VF++T YPD++ RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 605 KRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKR 781
>ref|NM_006982.1| Homo sapiens cartilage paired-class homeoprotein 1 (CART1), mRNA
Length = 1442
Score = 74.3 bits (181), Expect = 7e-12
Identities = 34/59 (57%), Positives = 49/59 (82%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+F++ QL+ LE VF++T YPD+++RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 549 KRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKR 725
>gb|U31986.1|HSU31986 Human cartilage-specific homeodomain protein Cart-1 mRNA, complete
cds
Length = 1442
Score = 74.3 bits (181), Expect = 7e-12
Identities = 34/59 (57%), Positives = 49/59 (82%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+F++ QL+ LE VF++T YPD+++RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 549 KRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKR 725
>ref|NM_006492.1| Homo sapiens aristaless-like homeobox 3 (ALX3), mRNA
Length = 1800
Score = 74.3 bits (181), Expect = 7e-12
Identities = 35/59 (59%), Positives = 47/59 (79%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+FS QL+ LE VF++T YPD++ RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 457 KRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKR 633
>gb|AF008203.1|AF008203 Homo sapiens homeobox protein (Alx3) mRNA, complete cds
Length = 1800
Score = 74.3 bits (181), Expect = 7e-12
Identities = 35/59 (59%), Positives = 47/59 (79%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+FS QL+ LE VF++T YPD++ RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 457 KRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKR 633
>ref|NM_012921.1| Rattus norvegicus Cartilage homeo protein 1 (Cart1), mRNA
Length = 1760
Score = 74.3 bits (181), Expect = 7e-12
Identities = 34/59 (57%), Positives = 49/59 (82%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+F++ QL+ LE VF++T YPD+++RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 854 KRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKR 1030
>gb|U59830.1|LOU59830 Loligo opalescens Pax-6 mRNA, complete cds
Length = 1980
Score = 74.3 bits (181), Expect = 7e-12
Identities = 36/58 (62%), Positives = 43/58 (74%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSF+A Q++ LE F RT YPD+ RERLA LPE+RIQVWF NRRAK RR+
Sbjct: 735 QRNRTSFTAAQIEALEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNRRAKWRRE 908
>gb|L14018.1|RATCART1X Rat cartilage homeoprotein 1 (Cart-1) mRNA, complete cds
Length = 1760
Score = 74.3 bits (181), Expect = 7e-12
Identities = 34/59 (57%), Positives = 49/59 (82%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+F++ QL+ LE VF++T YPD+++RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 854 KRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKR 1030
>emb|X81403.1|MAALX3 M.auratus mRNA for alx3
Length = 1744
Score = 74.3 bits (181), Expect = 7e-12
Identities = 35/59 (59%), Positives = 47/59 (79%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+FS QL+ LE VF++T YPD++ RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 486 KRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKR 662
>gb|U15276.1|XLU15276 Xenopus laevis cartilage homeoprotein 1 precursor (Xcart1) mRNA,
complete cds
Length = 1274
Score = 74.3 bits (181), Expect = 7e-12
Identities = 34/59 (57%), Positives = 49/59 (82%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+F++ QL+ LE VF++T YPD+++RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 518 KRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKR 694
>gb|BC010923.1|BC010923 Homo sapiens, Similar to cartilage paired-class homeoprotein 1,
clone MGC:13497 IMAGE:4278460, mRNA, complete cds
Length = 1326
Score = 74.3 bits (181), Expect = 7e-12
Identities = 34/59 (57%), Positives = 49/59 (82%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+F++ QL+ LE VF++T YPD+++RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 404 KRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKR 580
>gb|AY028904.1| Girardia tigrina Pax6A mRNA, partial cds
Length = 1392
Score = 73.9 bits (180), Expect = 9e-12
Identities = 36/58 (62%), Positives = 42/58 (72%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSFS +QL LE F RT YPD+ RE+LA LPE+RIQVWF NRRAK RR+
Sbjct: 667 QRNRTSFSTDQLDSLEKEFERTHYPDVFAREKLADKISLPEARIQVWFSNRRAKWRRE 840
>emb|AJ404888.1|HSA404888 Homo sapiens mRNA for homeodomain transcription factor ALX4
Length = 1493
Score = 73.9 bits (180), Expect = 9e-12
Identities = 34/59 (57%), Positives = 48/59 (80%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+F++ QL+ LE VF++T YPD++ RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 692 KRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKR 868
>ref|XM_030752.1| Homo sapiens aristaless-like homeobox 4 (ALX4), mRNA
Length = 1581
Score = 73.9 bits (180), Expect = 9e-12
Identities = 34/59 (57%), Positives = 48/59 (80%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+F++ QL+ LE VF++T YPD++ RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 742 KRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKR 918
>gb|AF294629.1|AF294629 Homo sapiens aristaless-like 4 (ALX4) mRNA, complete cds
Length = 1583
Score = 73.9 bits (180), Expect = 9e-12
Identities = 34/59 (57%), Positives = 48/59 (80%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+F++ QL+ LE VF++T YPD++ RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 744 KRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKR 920
>ref|NM_021926.1| Homo sapiens aristaless-like homeobox 4 (ALX4), mRNA
Length = 1583
Score = 73.9 bits (180), Expect = 9e-12
Identities = 34/59 (57%), Positives = 48/59 (80%)
Frame = +3
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+F++ QL+ LE VF++T YPD++ RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 744 KRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKR 920
>ref|NM_007442.1| Mus musculus aristaless 4 (Alx4), mRNA
Length = 1770
Score = 73.9 bits (180), Expect = 9e-12
Identities = 34/59 (57%), Positives = 48/59 (80%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+F++ QL+ LE VF++T YPD++ RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 799 KRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKR 975
>ref|NM_079899.1| Drosophila melanogaster twin of eyeless (toy), mRNA
Length = 1734
Score = 73.9 bits (180), Expect = 9e-12
Identities = 37/58 (63%), Positives = 42/58 (71%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSFS EQ+ LE F RT YPD+ RERLA LPE+RIQVWF NRRAK RR+
Sbjct: 805 QRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRRE 978
>gb|AF134350.1|AF134350 Drosophila melanogaster transcription factor Toy (toy) mRNA,
complete cds
Length = 1734
Score = 73.9 bits (180), Expect = 9e-12
Identities = 37/58 (63%), Positives = 42/58 (71%)
Frame = +1
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSFS EQ+ LE F RT YPD+ RERLA LPE+RIQVWF NRRAK RR+
Sbjct: 805 QRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRRE 978
>gb|AF001465.1|MMAF001465 Mus musculus paired-type homeodomain transcription factor (Alx4)
mRNA, complete cds
Length = 1770
Score = 73.9 bits (180), Expect = 9e-12
Identities = 34/59 (57%), Positives = 48/59 (80%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+F++ QL+ LE VF++T YPD++ RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 799 KRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKR 975
>dbj|AB058691.1|AB058691 Homo sapiens mRNA for KIAA1788 protein, partial cds
Length = 5654
Score = 73.9 bits (180), Expect = 9e-12
Identities = 34/59 (57%), Positives = 48/59 (80%)
Frame = +2
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+F++ QL+ LE VF++T YPD++ RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 647 KRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKR 823
>dbj|AB017632.1|AB017632 Dugesia japonica mRNA for DjPax-6, complete cds
Length = 2006
Score = 73.9 bits (180), Expect = 9e-12
Identities = 36/58 (62%), Positives = 42/58 (72%)
Frame = +3
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSFS +QL LE F RT YPD+ RE+LA LPE+RIQVWF NRRAK RR+
Sbjct: 1005 QRNRTSFSTDQLDSLEKEFERTHYPDVFAREKLADKISLPEARIQVWFSNRRAKWRRE 1178
>gb|AY051487.1| Drosophila melanogaster GH14454 full length cDNA
Length = 2277
Score = 73.9 bits (180), Expect = 9e-12
Identities = 37/58 (63%), Positives = 42/58 (71%)
Frame = +2
Query: 87 RRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+R RTSFS EQ+ LE F RT YPD+ RERLA LPE+RIQVWF NRRAK RR+
Sbjct: 1295 QRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRRE 1468
>gb|AF092538.1|AF092538 Gallus gallus paired type homeodomain protein (Alx-4) mRNA,
complete cds
Length = 1164
Score = 73.9 bits (180), Expect = 9e-12
Identities = 34/59 (57%), Positives = 48/59 (80%)
Frame = +1
Query: 86 QRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ 144
+RR RT+F++ QL+ LE VF++T YPD++ RE+LA T L E+R+QVWFQNRRAK R++
Sbjct: 574 KRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKR 750
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 23, 2002 12:49 AM
Number of letters in database: 626,783,262
Number of sequences in database: 1,168,056
Lambda K H
0.321 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 921,023,555
Number of Sequences: 1168056
Number of extensions: 12345705
Number of successful extensions: 55094
Number of sequences better than 10.0: 3805
Number of HSP's better than 10.0 without gapping: 30363
Number of HSP's successfully gapped in prelim test: 2276
Number of HSP's that attempted gapping in prelim test: 20723
Number of HSP's gapped (non-prelim): 40046
length of query: 232
length of database: 1,640,583,519
effective HSP length: 130
effective length of query: 102
effective length of database: 1,488,736,239
effective search space: 151851096378
effective search space used: 151851096378
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)