TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(425 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,171,752 sequences; 566,364,212 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_009031.1| Mus musculus retinoblastoma binding protei... 892 0.0
gb|U35142.1|MMU35142 Mus musculus retinoblastoma-binding pr... 892 0.0
gb|BC003785.1|BC003785 Mus musculus, retinoblastoma binding... 892 0.0
ref|NM_002893.2| Homo sapiens retinoblastoma binding protei... 890 0.0
emb|X72841.1|HSIEF7442 H.sapiens IEF 7442 mRNA 890 0.0
gb|U35143.1|HSU35143 Human retinoblastoma-binding protein (... 890 0.0
ref|NM_031816.1| Rattus norvegicus retinoblastoma binding p... 890 0.0
gb|AF090306.1|AF090306 Rattus norvegicus retinoblastoma bin... 890 0.0
ref|XM_010272.2| Homo sapiens retinoblastoma binding protei... 603 0.0
gb|AF279275.1|AF279275 Gallus gallus Rbap46 polypeptide mRN... 839 0.0
gb|BC003092.1|BC003092 Homo sapiens, Similar to retinoblast... 800 0.0
ref|NM_005610.1| Homo sapiens retinoblastoma binding protei... 800 0.0
emb|X74262.1|HSRBAP48 H.sapiens RbAp48 mRNA encoding retino... 800 0.0
ref|XM_018112.5| Homo sapiens retinoblastoma binding protei... 800 0.0
ref|NM_009030.1| Mus musculus retinoblastoma binding protei... 798 0.0
gb|U35141.1|MMU35141 Mus musculus retinoblastoma-binding pr... 798 0.0
gb|AF097750.1|AF097750 Gallus gallus chromatin assembly fac... 796 0.0
gb|AF073787.1|AF073787 Xenopus laevis retinoblastoma A asso... 786 0.0
ref|NM_079630.1| Drosophila melanogaster Chromatin assembly... 779 0.0
gb|AY061408.1| Drosophila melanogaster LD33761 full length ... 779 0.0
gb|U62388.1|DMU62388 Drosophila melanogaster chromatin asse... 779 0.0
emb|X71810.1|HSIEF9306 H.sapiens IEF 9306 mRNA 778 0.0
gb|AE003708.2|AE003708 Drosophila melanogaster genomic scaf... 451 0.0
gb|AC009904.7| Drosophila melanogaster, chromosome 3R, regi... 451 0.0
ref|XM_030409.1| Homo sapiens similar to retinoblastoma-bin... 754 0.0
ref|XM_030423.1| Homo sapiens similar to retinoblastoma bin... 732 0.0
gb|BC015123.1|BC015123 Homo sapiens, Similar to retinoblast... 692 0.0
emb|AL390237.9|AL390237 Human DNA sequence from clone RP11-... 363 0.0
gb|AE000658.1|HUAE000658 Homo sapiens T-cell receptor alpha... 574 0.0
gb|AF116530.1|AF116530 Caenorhabditis elegans synthetic mul... 635 e-180
ref|NM_060151.1| chromatin assembly factor 1 P55 subunit like 635 e-180
ref|XM_069157.2| Homo sapiens similar to CHROMATIN ASSEMBLY... 624 e-177
ref|XM_063256.2| Homo sapiens similar to retinoblastoma bin... 604 e-171
ref|NM_125208.1| WD-40 repeat protein MSI1 (sp|O22467); als... 580 e-164
gb|AF016846.1|AF016846 Arabidopsis thaliana WD-40 repeat pr... 580 e-164
gb|AY059874.1| Arabidopsis thaliana WD-40 repeat protein MS... 580 e-164
gb|AF016845.1|AF016845 Lycopersicon esculentum WD-40 repeat... 571 e-161
gb|AF440219.1|AF440219 Zea mays cultivar B73 MSI type nucle... 569 e-160
emb|Z81097.1|CEK07A1 Caenorhabditis elegans cosmid K07A1, c... 302 e-160
emb|AL512427.10|AL512427 Human DNA sequence from clone RP11... 560 e-157
ref|XM_069195.1| Homo sapiens similar to Chromatin assembly... 515 e-144
ref|XM_069182.1| Homo sapiens similar to retinoblastoma A a... 515 e-144
ref|NM_060150.1| retinablastoma-binding protein RBAP46 like 456 e-126
gb|AF297468.1|AF297468 Schistosoma mansoni strain NMRI chro... 449 e-124
ref|NM_127230.1| putative WD-40 repeat protein, MSI2 439 e-121
gb|AY056814.1| Arabidopsis thaliana At2g16780/T24I21.19 mRN... 439 e-121
gb|AF016847.1|AF016847 Arabidopsis thaliana WD-40 repeat pr... 439 e-121
ref|NM_119671.1| WD-40 repeat protein (MSI3) 436 e-120
gb|AF016848.1|AF016848 Arabidopsis thaliana WD-40 repeat pr... 433 e-119
emb|AL031324.2|SPCC1672 S.pombe chromosome III cosmid c1672 350 e-108
emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of E... 309 4e-82
dbj|AB019228.1|AB019228 Arabidopsis thaliana genomic DNA, c... 162 7e-78
gb|U18795.1|SCE9669 Saccharomyces cerevisiae chromosome V c... 276 2e-72
emb|Z97210.2|SPAC29A4 S.pombe chromosome I cosmid c29A4 247 1e-63
gb|AF384037.1|AF384037 Zea mays nucleosome/chromatin assemb... 228 8e-58
gb|AF250047.1|AF250047 Zea mays WD-repeat protein RBAP1 (rb... 227 2e-57
gb|AY059799.1| Arabidopsis thaliana putative WD-40 repeat p... 222 4e-56
gb|AY057655.1| Arabidopsis thaliana At2g19520/F3P11.12 mRNA... 222 4e-56
ref|NM_127510.1| putative WD-40 repeat protein, MSI4 222 4e-56
gb|AF028711.1|AF028711 Arabidopsis thaliana WD-40 repeat pr... 222 6e-56
emb|Y18519.1|SLA18519 Silene latifolia mRNA for X1 protein 217 2e-54
emb|Y18517.1|SLA18517 Silene latifolia mRNA for Y1 protein 216 2e-54
ref|NM_119118.1| WD-40 repeat - like protein 213 4e-53
emb|AL114645.1|CNS01BST Botrytis cinerea strain T4 cDNA lib... 209 4e-52
emb|Z98944.1|SPAC25H1 S.pombe chromosome I cosmid c25H1 190 2e-46
emb|Z36064.1|SCYBR195C S.cerevisiae chromosome II reading f... 184 2e-44
emb|Z21487.1|SCCHRIIFG S.cerevisiae RIM, MSI1, PGI, and rib... 184 2e-44
gb|M27300.1|YSCMSI1 S.cerevisiae MSI1 gene, complete cds 184 2e-44
emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosom... 134 2e-39
emb|AL035522.1|ATT12J5 Arabidopsis thaliana DNA chromosome ... 134 2e-39
emb|AL022023.1|ATM4E13 Arabidopsis thaliana DNA chromosome ... 134 2e-39
gb|AC005825.3|AC005825 Arabidopsis thaliana chromosome II s... 152 4e-39
ref|NM_127512.1| putative WD-40 repeat protein 160 2e-37
gb|AF370506.1|AF370506 Arabidopsis thaliana putative WD-40 ... 160 2e-37
ref|XM_067237.1| Homo sapiens similar to Rbap46 polypeptide... 158 1e-36
gb|AE003785.2|AE003785 Drosophila melanogaster genomic scaf... 130 3e-28
gb|AC007054.24|AC007054 Drosophila melanogaster, chromosome... 130 3e-28
gb|AY071477.1| Drosophila melanogaster RE55020 full length ... 130 3e-28
emb|AL353012.1|SPBC1711 S.pombe chromosome II cosmid c1711 127 3e-27
gb|BC008121.1|BC008121 Mus musculus, Similar to glutamate r... 123 4e-26
gb|AF337808.1|AF337808 Homo sapiens glutamate rich WD repea... 123 4e-26
ref|NM_031485.1| Homo sapiens glutamate rich WD repeat prot... 123 4e-26
gb|BC002440.1|BC002440 Homo sapiens, Similar to CG12792 gen... 123 4e-26
dbj|D30014.1|RICEN20522 Rice mRNA EN205, partial sequence 90 8e-25
ref|NM_065690.1| Caenorhabditis elegans 114 2e-23
emb|Z48622.1|SC9553 S.cerevisiae chromosome XIII cosmid 9553 112 8e-23
gb|M21696.1|YSCPPG S.cerevisiae phosphoglucoisomerase 1 (PG... 101 1e-19
emb|AJ009770.1|HSA9770 Homo sapiens mRNA for putative trans... 96 8e-18
ref|XM_050783.1| Homo sapiens similar to TAF5-like RNA poly... 96 8e-18
ref|XM_001872.3| Homo sapiens TAF5-like RNA polymerase II, ... 96 8e-18
ref|NM_014409.1| Homo sapiens TAF5-like RNA polymerase II, ... 96 8e-18
gb|AF069736.1|AF069736 Homo sapiens PCAF associated factor ... 96 8e-18
ref|NM_102666.1| peroxisomal targeting signal type 2 receptor 95 1e-17
gb|AF130973.1|AF130973 Arabidopsis thaliana peroxisomal tar... 95 1e-17
gb|AC021043.4|AC021043 Arabidopsis thaliana chromosome I BA... 95 1e-17
gb|BC013550.1|BC013550 Mus musculus, Similar to PCAF associ... 93 5e-17
gb|AF430070.1|AF430070 Gossypium hirsutum peroxisomal targe... 92 7e-17
gb|BC006268.1|BC006268 Homo sapiens, peroxisomal biogenesis... 92 1e-16
gb|U76560.1|HSU76560 Human peroxisome targeting signal 2 re... 92 1e-16
ref|NM_000288.1| Homo sapiens peroxisomal biogenesis factor... 92 1e-16
gb|U88871.1|HSU88871 Human HsPex7p (HsPEX7) mRNA, complete cds 92 1e-16
gb|AC024818.1| Caenorhabditis elegans cosmid Y54H5A, comple... 90 3e-16
dbj|AP003593.1|AP003593 Nostoc sp. PCC 7120 DNA, complete g... 89 8e-16
dbj|AK004687.1|AK004687 Mus musculus adult male lung cDNA, ... 88 2e-15
ref|NM_008822.1| Mus musculus peroxisome biogenesis factor ... 88 2e-15
gb|U69171.1|MMU69171 Mus musculus peroxisomal PTS2 receptor... 88 2e-15
ref|NM_120923.1| katanin p80 subunit - like protein 88 2e-15
emb|AL023833.1|CEY21F11A Caenorhabditis elegans cosmid Y21F... 87 2e-15
gb|AE003554.2|AE003554 Drosophila melanogaster genomic scaf... 87 3e-15
gb|AC010019.4| Drosophila melanogaster 3L BAC RP98-6F6 (Ros... 87 3e-15
ref|XM_081279.1| similar to LD24014p (D. melanogaster), mRNA 86 7e-15
gb|AY051695.1| Drosophila melanogaster LD24014 full length ... 86 7e-15
gb|U75309.1|HSU75309 Human TBP-associated factor (hTAFII100... 86 9e-15
ref|NM_006951.1| Homo sapiens TATA box binding protein (TBP... 86 9e-15
emb|X95525.1|HSTAFII10 H.sapiens mRNA for TAFII100 protein 86 9e-15
gb|U80191.1|HSU80191 Human TFIID subunit TAFII100 mRNA, com... 86 9e-15
ref|XM_031978.3| Homo sapiens TAF5 RNA polymerase II, TATA ... 86 9e-15
dbj|AK003477.1|AK003477 Mus musculus 18 days embryo whole b... 78 1e-14
gb|L24437.1|ATHCOP1A Arabidopsis thaliana (COP1) regulatory... 85 1e-14
ref|NM_122250.1| putative protein 84 2e-14
dbj|AP003581.1|AP003581 Nostoc sp. PCC 7120 DNA, complete g... 84 2e-14
ref|NM_128165.1| expressed protein 84 2e-14
gb|AF443204.1|AF443204 Chlamydomonas reinhardtii WD40-repea... 84 3e-14
gb|AF315714.1|AF315714 Ipomoea nil COP1 mRNA, complete cds 84 3e-14
ref|NM_128855.1| photomorphogenesis repressor (COP1) 83 6e-14
gb|AF250048.1|AF250048 Zea mays WD-repeat protein RBAP2 (rb... 83 6e-14
gb|AF242546.1|AF242546 Homo sapiens YTM1 mRNA, complete cds 81 2e-13
ref|XM_087024.1| Homo sapiens WD repeat domain 12 (WDR12), ... 81 2e-13
ref|NM_018256.2| Homo sapiens WD repeat domain 12 (WDR12), ... 81 2e-13
dbj|AK022782.1|AK022782 Homo sapiens cDNA FLJ12720 fis, clo... 81 2e-13
dbj|AK022781.1|AK022781 Homo sapiens cDNA FLJ12719 fis, clo... 81 2e-13
dbj|AK001743.1|AK001743 Homo sapiens cDNA FLJ10881 fis, clo... 81 2e-13
dbj|AK056092.1|AK056092 Homo sapiens cDNA FLJ31530 fis, clo... 81 2e-13
gb|BC008082.1|BC008082 Homo sapiens, clone MGC:835 IMAGE:30... 81 2e-13
ref|NM_106276.1| unknown protein 80 3e-13
ref|NM_119703.1| putative protein 80 3e-13
gb|AF115313.1|AF115313 Thermomonospora curvata PkwR (pkwR) ... 80 4e-13
dbj|AK016611.1|AK016611 Mus musculus adult male testis cDNA... 80 5e-13
dbj|AK007500.1|AK007500 Mus musculus 10 day old male pancre... 80 5e-13
gb|BC004748.1|BC004748 Mus musculus, WD repeat domain 12, c... 80 5e-13
gb|AY059432.1| Mus musculus MTA.A10.069 WD repeat domain 12... 80 5e-13
dbj|AB044749.1|AB044749 Homo sapiens mRNA for WDC146, compl... 80 5e-13
gb|AY059431.1| Mus musculus WD repeat domain 12 (Wdr12) mRN... 80 5e-13
ref|NM_021312.1| Mus musculus WD repeat domain 12 (Wdr12), ... 80 5e-13
dbj|AB041608.1|AB041608 Mus musculus brain cDNA, clone MNCb... 80 5e-13
gb|AF239765.1|AF239765 Mus musculus nuclear protein Ytm1p m... 80 5e-13
gb|AF029984.1|AF029984 Lycopersicon esculentum COP1 homolog... 79 6e-13
ref|NM_005647.1| Homo sapiens transducin (beta)-like 1 (TBL... 79 8e-13
emb|Y12781.1|HSTBL1 Homo sapiens mRNA for transducin (beta)... 79 8e-13
ref|XM_010334.6| Homo sapiens similar to transducin (beta)-... 79 8e-13
ref|XM_092154.1| Homo sapiens similar to F-box protein FBW7... 78 1e-12
emb|X61480.1|DDCORONIN D.discoideum mRNA for coronin 78 1e-12
gb|AF025330.1|AF025330 Danio rerio receptor for activated p... 78 2e-12
ref|NM_101904.1| hypothetical protein 78 2e-12
gb|U49437.1|BGU49437 Biomphalaria glabrata RACK mRNA, compl... 78 2e-12
ref|NM_064584.1| six WD40 repeats 77 2e-12
ref|NM_118006.1| putative protein 77 4e-12
dbj|AP003592.1|AP003592 Nostoc sp. PCC 7120 DNA, complete g... 77 4e-12
dbj|AB022686.1|AB022686 Lycopersicon esculentum mRNA for Le... 76 7e-12
ref|NM_057921.1| Drosophila melanogaster Receptor of activa... 75 9e-12
dbj|AP003588.1|AP003588 Nostoc sp. PCC 7120 DNA, complete g... 75 9e-12
dbj|D17526.1|TOBARCA Tobacco mRNA for G protein beta subuni... 75 9e-12
gb|AY071661.1| Drosophila melanogaster RE74715 full length ... 75 9e-12
gb|AC002333.2|AC002333 Arabidopsis thaliana chromosome II s... 75 9e-12
ref|NM_129939.1| putative splicing factor 75 9e-12
emb|AJ271728.1|ATH271728 Arabidopsis thaliana oasB gene for... 75 1e-11
gb|AF323584.1|AF323584 Podospora anserina beta transducin-l... 75 1e-11
gb|AF323583.1|AF323583 Podospora anserina beta transducin-l... 75 1e-11
gb|AF323582.1|AF323582 Podospora anserina beta transducin-l... 75 1e-11
dbj|AP003582.1|AP003582 Nostoc sp. PCC 7120 DNA, complete g... 75 2e-11
dbj|AP003600.1|AP003600 Nostoc sp. PCC 7120 plasmid pCC7120... 75 2e-11
gb|AF394913.1|AF394913 Rosa hybrid cultivar photoregulatory... 75 2e-11
ref|NG_000668.1| Drosophila melanogaster ebi (ebi) on chrom... 74 2e-11
ref|XM_010869.5| Homo sapiens similar to WD40 protein Ciao1... 74 2e-11
gb|AC005762.1|AC005762 Drosophila melanogaster DNA sequence... 74 2e-11
gb|AY061388.1| Drosophila melanogaster LD31217 full length ... 74 2e-11
gb|AE003813.2|AE003813 Drosophila melanogaster genomic scaf... 74 2e-11
gb|BC001395.1|BC001395 Homo sapiens, WD40 protein Ciao1, cl... 74 2e-11
ref|NM_057981.1| Drosophila melanogaster ebi (ebi), transcr... 74 2e-11
ref|NG_000510.1| Drosophila melanogaster alpha-Adaptin (alp... 74 2e-11
gb|AE003589.2|AE003589 Drosophila melanogaster genomic scaf... 74 2e-11
ref|NM_004804.1| Homo sapiens WD40 protein Ciao1 (CIAO1), mRNA 74 2e-11
gb|U63810.1|HSU63810 Homo sapiens WD40 protein Ciao 1 mRNA,... 74 2e-11
emb|Y09514.1|NPY09514 N.plumbaginifolia mRNA for G protein ... 74 2e-11
ref|NG_000791.1| Drosophila melanogaster (Ercc1) on chromo... 74 2e-11
gb|AF146345.1|AF146345 Drosophila melanogaster Ebi mRNA, co... 74 2e-11
ref|NG_000079.1| Drosophila melanogaster Ribosomal protein ... 74 2e-11
gb|AC010578.5|AC010578 Drosophila melanogaster, chromosome ... 74 2e-11
ref|XM_051882.1| Homo sapiens WD40 protein Ciao1 (CIAO1), mRNA 74 2e-11
emb|Y08678.1|MSGB1 M.sativa mRNA for G protein beta subunit... 74 3e-11
emb|AL590450.1|CNS07EGH chromosome XI of strain GB-M1 of En... 74 3e-11
gb|AY050883.1| Arabidopsis thaliana unknown protein (AT4g18... 74 3e-11
gb|AY056430.1| Arabidopsis thaliana AT4g18900/F13C5_70 mRNA... 74 3e-11
ref|NM_118007.1| Expressed protein 74 3e-11
gb|AF323585.1|AF323585 Podospora anserina beta transducin-l... 74 3e-11
dbj|AB026648.1|AB026648 Arabidopsis thaliana genomic DNA, c... 73 4e-11
emb|X98130.1|AT81KBGEN A.thaliana 81kb genomic sequence 73 4e-11
emb|X97488.1|ATORF10 A.thaliana mRNA for unknown protein, O... 73 4e-11
ref|NM_113575.1| transcriptional regulator protein, putative 73 4e-11
gb|AF049902.1| Trypanosoma brucei rhodesiense activated pro... 73 4e-11
gb|U72205.1|TBU72205 Trypanosoma brucei activated protein k... 73 4e-11
emb|Z72388.1|NPGPROTB N.plumbaginifolia mRNA for G protein ... 73 6e-11
dbj|AK026522.1|AK026522 Homo sapiens cDNA: FLJ22869 fis, cl... 73 6e-11
dbj|AP003590.1|AP003590 Nostoc sp. PCC 7120 DNA, complete g... 73 6e-11
ref|XM_040554.4| Homo sapiens similar to similar to constit... 73 6e-11
ref|NM_124660.1| Notchless protein homolog 73 6e-11
dbj|AK001278.1|AK001278 Homo sapiens cDNA FLJ10416 fis, clo... 73 6e-11
ref|XM_010790.5| Homo sapiens tumor suppressing subtransfer... 73 6e-11
ref|NM_022457.3| Homo sapiens similar to constitutive photo... 73 6e-11
dbj|AK025789.1|AK025789 Homo sapiens cDNA: FLJ22136 fis, cl... 73 6e-11
ref|XM_059513.2| Homo sapiens similar to constitutive photo... 73 6e-11
ref|NM_003310.1| Homo sapiens tumor suppressing subtransfer... 73 6e-11
gb|AF019952.1|AF019952 Homo sapiens tumor suppressing STF c... 73 6e-11
gb|BC002485.1|BC002485 Homo sapiens, tumor suppressing subt... 73 6e-11
gb|AF151110.1|AF151110 Mus musculus COP1 protein (Cop1) mRN... 73 6e-11
dbj|AB022687.1|AB022687 Lycopersicon esculentum mRNA for Le... 72 7e-11
gb|BC018399.1|BC018399 Mus musculus, hypothetical protein s... 72 7e-11
emb|X97800.1|HVRACK1 H.vulgaris mRNA for put. activated pro... 72 7e-11
gb|AF063022.1|AF063022 Crithidia fasciculata CACK protein (... 72 7e-11
gb|L37885.2|YSPGNRP Schizosaccharomyces pombe guanine nucle... 72 7e-11
gb|U96491.1|DMU96491 Drosophila melanogaster RACK1 (rack1) ... 72 7e-11
emb|Z33643.1|BNGNRPR B.napus (Naehan) bgb1 mRNA for guanine... 72 7e-11
gb|BC019093.1|BC019093 Homo sapiens, guanine nucleotide bin... 72 1e-10
gb|BC000366.1|BC000366 Homo sapiens, guanine nucleotide bin... 72 1e-10
gb|BC010119.1|BC010119 Homo sapiens, guanine nucleotide bin... 72 1e-10
gb|BC012075.1|BC012075 Homo sapiens, hypothetical protein s... 72 1e-10
gb|BC019362.1|BC019362 Homo sapiens, guanine nucleotide bin... 72 1e-10
gb|BC014788.1|BC014788 Homo sapiens, guanine nucleotide bin... 72 1e-10
emb|Z33879.1|SSGBETA S.scrofa mRNA encoding G-beta like pro... 72 1e-10
ref|XM_079159.1| CG3436, mRNA 72 1e-10
gb|BC000672.1|BC000672 Homo sapiens, guanine nucleotide bin... 72 1e-10
dbj|AK002493.1|AK002493 Mus musculus adult male kidney cDNA... 72 1e-10
gb|BC002884.1|BC002884 Homo sapiens, hypothetical protein s... 72 1e-10
ref|NM_008143.1| Mus musculus guanine nucleotide binding pr... 72 1e-10
emb|X75313.1|MMRNAGM M.musculus (C57BL/6) GB-like mRNA 72 1e-10
ref|XM_098427.1| Homo sapiens guanine nucleotide binding pr... 72 1e-10
gb|BC017287.1|BC017287 Homo sapiens, guanine nucleotide bin... 72 1e-10
gb|M24194.1|HUMMHBA123 Human MHC protein homologous to chic... 72 1e-10
dbj|D29802.1|MUSGPBSL Mouse mRNA for G protein beta subunit... 72 1e-10
gb|BC014256.1|BC014256 Homo sapiens, Similar to guanine nuc... 72 1e-10
ref|XM_057125.1| Homo sapiens similar to guanine nucleotide... 72 1e-10
ref|XM_034958.1| Homo sapiens similar to guanine nucleotide... 72 1e-10
ref|NM_006098.1| Homo sapiens guanine nucleotide binding pr... 72 1e-10
gb|M24193.1|CHKMHB123A Chicken MHC B complex protein (C12-3... 72 1e-10
gb|BC021993.1|BC021993 Homo sapiens, guanine nucleotide bin... 72 1e-10
ref|NM_130734.1| Rattus norvegicus guanine nucleotide bindi... 72 1e-10
gb|BC020322.1|BC020322 Mus musculus, clone IMAGE:4458340, mRNA 72 1e-10
emb|AJ132860.1|BTA132860 Bos taurus mRNA for receptor for a... 72 1e-10
gb|U03390.1|RNU03390 Rattus norvegicus Sprague Dawley prote... 72 1e-10
gb|BC000214.1|BC000214 Homo sapiens, guanine nucleotide bin... 72 1e-10
dbj|AK017772.1|AK017772 Mus musculus 8 days embryo whole bo... 72 1e-10
gb|AY070530.1| Drosophila melanogaster GM13767 full length ... 72 1e-10
ref|NM_018096.1| Homo sapiens hypothetical protein similar ... 72 1e-10
dbj|AK001320.1|AK001320 Homo sapiens cDNA FLJ10458 fis, clo... 72 1e-10
gb|L28125.2|FLABTLP Podospora anserina beta transducin-like... 72 1e-10
dbj|AB025245.1|AB025245 Xenopus laevis mRNA for coronin hom... 72 1e-10
ref|NM_025296.1| Mus musculus WD40 protein Ciao1 (Ciao1-pen... 71 2e-10
dbj|AK002314.1|AK002314 Mus musculus adult male kidney cDNA... 71 2e-10
emb|AL357152.1|SCH18 Streptomyces coelicolor cosmid H18 71 2e-10
gb|U77381.1|ATU77381 Arabidopsis thaliana WD-40 repeat prot... 71 2e-10
emb|AJ131817.1|SCO131817 Streptomyces coelicolor wdpA gene 71 2e-10
ref|NM_129713.1| putative small nuclear ribonucleoprotein P... 71 2e-10
gb|AY063016.1| Arabidopsis thaliana putative guanine nucleo... 71 2e-10
gb|AC069551.4|AC069551 Genomic sequence for Arabidopsis tha... 71 2e-10
gb|AY035007.1| Arabidopsis thaliana putative guanine nucleo... 71 2e-10
emb|AJ271374.1|TVA271374 Trichomonas vaginalis cor1 gene fo... 71 2e-10
gb|AC034107.5|T10F20 Sequence of BAC T10F20 from Arabidopsi... 71 2e-10
ref|NM_116211.1| putative protein 71 2e-10
gb|BC004089.1|BC004089 Mus musculus, WD40 protein Ciao1, cl... 71 2e-10
ref|NM_101670.1| WD-40 repeat protein 71 2e-10
ref|NM_004814.1| Homo sapiens U5 snRNP-specific 40 kDa prot... 71 2e-10
gb|AF090988.1|AF090988 Homo sapiens U5 snRNP-specific 40 kD... 71 2e-10
gb|AY061326.1| Drosophila melanogaster LD24373 full length ... 66 3e-10
ref|NM_103759.1| guanine nucleotide-binding protein, putative 70 3e-10
gb|AC073555.9|AC073555 Arabidopsis thaliana chromosome 1 BA... 70 3e-10
emb|AJ004807.1|NTAJ4807 Nicotiana tabacum xanthi arcA 3 gen... 70 3e-10
gb|AC074308.1|AC074308 Arabidopsis thaliana chromosome 1 BA... 70 3e-10
gb|AY059723.1| Arabidopsis thaliana putative guanine nucleo... 70 3e-10
dbj|AK002371.1|AK002371 Mus musculus adult male kidney cDNA... 70 3e-10
ref|XM_082025.1| CG1523, mRNA 70 4e-10
gb|AY051986.1| Drosophila melanogaster LD45447 full length ... 70 4e-10
dbj|AK007246.1|AK007246 Mus musculus adult male testis cDNA... 70 4e-10
ref|NM_030732.1| Mus musculus IRA1 protein (IRA1), mRNA 70 4e-10
gb|AF268195.1|AF268195 Mus musculus strain BALB/c IRA1 mRNA... 70 4e-10
gb|AF069737.1|AF069737 Xenopus laevis notchless (nle) mRNA,... 70 5e-10
ref|XM_001618.4| Homo sapiens U5 snRNP-specific 40 kDa prot... 70 5e-10
gb|AF105259.1|AF105259 Xenopus laevis activated protein kin... 70 5e-10
gb|AF025331.1|AF025331 Tilapia nilotica receptor for activa... 70 5e-10
gb|BC001494.1|BC001494 Homo sapiens, clone MGC:1910 IMAGE:3... 70 5e-10
dbj|D63999.1|SYCSLRA Synechocystis sp. PCC 6803 DNA, comple... 70 5e-10
ref|XM_096175.1| Homo sapiens nuclear receptor co-repressor... 69 6e-10
gb|AF314544.1|AF314544 Homo sapiens nuclear receptor co-rep... 69 6e-10
emb|AJ289773.1|PSA289773 Pisum sativum mRNA for COP1 regula... 69 6e-10
gb|AF268193.1|AF268193 Homo sapiens IRA1 mRNA, complete cds... 69 6e-10
emb|AJ289774.1|PSA289774 Pisum sativum mRNA for COP1 regula... 69 6e-10
ref|NM_080088.1| Drosophila melanogaster cannonball (can), ... 69 6e-10
gb|AF346730.1|AF346730 Drosophila melanogaster cannonball m... 69 6e-10
gb|AE003549.2|AE003549 Drosophila melanogaster genomic scaf... 69 6e-10
emb|Z36067.1|SCYBR198C S.cerevisiae chromosome II reading f... 69 6e-10
gb|AC010156.5| Drosophila melanogaster 3L BAC RP98-27H3 (Ro... 69 6e-10
ref|NM_024665.1| Homo sapiens nuclear receptor co-repressor... 69 6e-10
dbj|AK022956.1|AK022956 Homo sapiens cDNA FLJ12894 fis, clo... 69 6e-10
gb|M96642.1|PARRSP126A Paramecium tetraurelia P126 repetiti... 69 6e-10
emb|Y09579.1|PSCOP1PRT P.sativum mRNA for Cop1 protein 69 6e-10
emb|AJ427222.1|MMU427222 Mus musculus mRNA for cockayne syn... 69 8e-10
gb|AF100286.1|AF100286 Trypanosoma congolense strain IL1180... 69 8e-10
dbj|AK010576.1|AK010576 Mus musculus ES cells cDNA, RIKEN f... 69 8e-10
gb|AC008318.7|AC008318 Drosophila melanogaster, chromosome ... 69 1e-09
gb|AC008260.5|AC008260 Drosophila melanogaster, chromosome ... 69 1e-09
gb|AF261992.1|AF261992 Oryza sativa subsp. indica COP1 mRNA... 69 1e-09
ref|NM_009684.1| Mus musculus apoptotic protease activating... 69 1e-09
gb|AF064071.1|AF064071 Mus musculus apoptotic protease acti... 69 1e-09
ref|NM_057609.1| Drosophila melanogaster TBP-associated fac... 69 1e-09
dbj|AB040053.1|AB040053 Oryza sativa subsp. japonica rCOP1 ... 69 1e-09
ref|NG_000355.1| Drosophila melanogaster TBP-associated fac... 69 1e-09
gb|AE003590.2|AE003590 Drosophila melanogaster genomic scaf... 69 1e-09
gb|AY051960.1| Drosophila melanogaster LD42828 full length ... 69 1e-09
gb|AE003828.2|AE003828 Drosophila melanogaster genomic scaf... 69 1e-09
gb|AC005334.1|AC005334 Drosophila melanogaster DNA sequence... 69 1e-09
gb|U06460.1|DMU06460 Drosophila melanogaster transcription ... 69 1e-09
gb|AC005437.1|AC005437 Drosophila melanogaster DNA sequence... 69 1e-09
dbj|AB070895.1|AB070895 Mus musculus mRNA for clipin E/coro... 68 1e-09
ref|NM_016194.1| Homo sapiens guanine nucleotide binding pr... 68 1e-09
emb|AL117471.1|HSM800984 Homo sapiens mRNA; cDNA DKFZp586O1... 68 1e-09
dbj|AB020749.1|AB020749 Arabidopsis thaliana genomic DNA, c... 68 1e-09
gb|U44850.1|GMU44850 Glycine max G beta-like protein mRNA, ... 68 1e-09
dbj|AB025246.1|AB025246 Xenopus laevis mRNA for coronin hom... 68 1e-09
ref|NM_112695.1| protein kinase C-receptor/G-protein, putative 68 1e-09
gb|AY050338.1| Arabidopsis thaliana AT3g18130/MRC8_11 mRNA,... 68 1e-09
emb|AL133156.1|SPAC227 S.pombe chromosome I cosmid c227 68 1e-09
ref|NM_011779.1| Mus musculus coronin, actin binding protei... 68 2e-09
gb|AF143957.1|AF143957 Mus musculus coronin-3 mRNA, complet... 68 2e-09
dbj|AK016201.1|AK016201 Mus musculus adult male testis cDNA... 68 2e-09
gb|AF140359.1|AF140359 Rattus norvegicus coronin relative p... 68 2e-09
dbj|AK012649.1|AK012649 Mus musculus 10, 11 days embryo who... 68 2e-09
ref|NM_023979.1| Rattus norvegicus apoptotic protease activ... 68 2e-09
gb|AF320222.1|AF320222 Rattus norvegicus APAF1 (Apaf1) mRNA... 68 2e-09
ref|NM_104802.1| hypothetical protein 68 2e-09
gb|U27537.1|DDU27537 Dictyostelium discoideum G beta like p... 68 2e-09
ref|NM_000082.1| Homo sapiens Cockayne syndrome 1 (classica... 68 2e-09
gb|U28413.1|HSU28413 Human Cockayne syndrome complementatio... 68 2e-09
gb|AF083383.1|AF083383 Homo sapiens 38kDa splicing factor m... 67 2e-09
dbj|AK014865.1|AK014865 Mus musculus adult male testis cDNA... 67 2e-09
ref|NM_019069.1| Homo sapiens WD repeat domain 5B (WDR5B), ... 67 2e-09
gb|BC019444.1|BC019444 Mus musculus, coronin, actin binding... 67 2e-09
dbj|AK002149.1|AK002149 Homo sapiens cDNA FLJ11287 fis, clo... 67 2e-09
gb|BC023137.1| Mus musculus, RIKEN cDNA 2310058A11 gene, cl... 67 2e-09
dbj|AK009972.1|AK009972 Mus musculus adult male tongue cDNA... 67 2e-09
dbj|AP003597.1|AP003597 Nostoc sp. PCC 7120 DNA, complete g... 67 2e-09
ref|XM_035403.3| Homo sapiens coronin, actin binding protei... 67 2e-09
gb|AF336287.1|AF336287 Gossypium hirsutum WD1521 (wd1522) m... 67 2e-09
gb|BC003199.1|BC003199 Mus musculus, RIKEN cDNA 2310058A11 ... 67 2e-09
gb|AC012187.3|F13K23 Sequence of BAC F13K23 from Arabidopsi... 67 2e-09
dbj|AK016618.1|AK016618 Mus musculus adult male testis cDNA... 67 2e-09
ref|NM_101162.1| flower pigmentation protein ATAN11 67 2e-09
emb|AL078635.1|CZA382 Amycolatopsis orientalis cosmid pCZA382 67 2e-09
ref|NM_015426.1| Homo sapiens DKFZP434C245 protein (DKFZP43... 67 2e-09
gb|BC007417.1|BC007417 Homo sapiens, Similar to RIKEN cDNA ... 67 2e-09
dbj|AB023142.1|AB023142 Homo sapiens mRNA for KIAA0925 prot... 67 2e-09
dbj|AK056931.1|AK056931 Homo sapiens cDNA FLJ32369 fis, clo... 67 3e-09
gb|AF277458.1|AF277458 Arabidopsis thaliana LEUNIG (LEUNIG)... 67 3e-09
dbj|AK010364.1|AK010364 Mus musculus ES cells cDNA, RIKEN f... 67 3e-09
ref|XM_079245.1| CG4705, mRNA 67 3e-09
dbj|D38231.1|RICGPBSLP Rice mRNA for q group of receptor fo... 67 3e-09
ref|NM_119407.1| putative protein 67 3e-09
gb|AF218388.1|AF218388 Rattus norvegicus apoptotic protease... 67 3e-09
dbj|AP003455.2|AP003455 Oryza sativa genomic DNA, chromosom... 67 3e-09
gb|BC001353.1|BC001353 Homo sapiens, katanin p80 (WD40-cont... 67 3e-09
gb|AF021797.1|AF021797 Pichia pastoris peroxisomal receptor... 67 3e-09
ref|XM_048046.1| Homo sapiens katanin p80 (WD40-containing)... 67 3e-09
gb|AY074265.1| Arabidopsis thaliana unknown protein (At1g27... 67 4e-09
ref|NM_061344.1| Caenorhabditis elegans 67 4e-09
gb|AY057556.1| Arabidopsis thaliana At1g27840/F28L5_15 mRNA... 67 4e-09
ref|NM_102549.1| hypothetical protein 67 4e-09
gb|BC015998.1|BC015998 Homo sapiens, CDC20 (cell division c... 66 5e-09
gb|BC006272.1|BC006272 Homo sapiens, CDC20 (cell division c... 66 5e-09
ref|NM_014325.1| Homo sapiens coronin, actin binding protei... 66 5e-09
dbj|AB030656.1|AB030656 Homo sapiens mRNA for hCRNN4, compl... 66 5e-09
gb|AF132181.1|AF132181 Drosophila melanogaster clone LD2172... 66 5e-09
ref|NM_019222.1| Rattus norvegicus coronin, actin binding p... 66 5e-09
emb|AJ006064.1|RNO6064 Rattus norvegicus mRNA for coronin-l... 66 5e-09
ref|XM_046373.3| Homo sapiens CDC20 cell division cycle 20 ... 66 5e-09
gb|AC007892.4|AC007892 Drosophila melanogaster, chromosome ... 66 5e-09
ref|XM_081893.1| BcDNA:LD21720, mRNA 66 5e-09
dbj|AK023205.1|AK023205 Homo sapiens cDNA FLJ13143 fis, clo... 66 5e-09
ref|NM_001255.1| Homo sapiens CDC20 cell division cycle 20 ... 66 5e-09
gb|U05340.1|HSU05340 Human p55CDC mRNA, complete cds 66 5e-09
gb|BC010044.1|BC010044 Homo sapiens, CDC20 (cell division c... 66 5e-09
gb|AE003771.2|AE003771 Drosophila melanogaster genomic scaf... 66 5e-09
ref|XM_083885.1| Homo sapiens coronin, actin binding protei... 66 5e-09
gb|BC000624.1|BC000624 Homo sapiens, CDC20 (cell division c... 66 5e-09
gb|BC009426.1|BC009426 Homo sapiens, CDC20 (cell division c... 66 5e-09
gb|BC009425.1|BC009425 Homo sapiens, CDC20 (cell division c... 66 5e-09
gb|BC002342.1|BC002342 Homo sapiens, coronin, actin-binding... 66 5e-09
emb|AL162070.1|HSM802601 Homo sapiens mRNA; cDNA DKFZp762H1... 66 5e-09
gb|AF099644.1|AF099644 Homo sapiens cell cycle protein CDC2... 66 5e-09
ref|NM_058924.1| beta transducin 66 5e-09
gb|BC012803.1|BC012803 Homo sapiens, CDC20 (cell division c... 66 5e-09
gb|BC013303.1|BC013303 Homo sapiens, CDC20 (cell division c... 66 5e-09
ref|NM_007062.1| Homo sapiens nuclear phosphoprotein simila... 66 5e-09
gb|L07758.1|HUM56KDAPR Human IEF SSP 9502 mRNA, complete cds 66 5e-09
gb|BC012827.1|BC012827 Homo sapiens, CDC20 (cell division c... 66 5e-09
gb|BC001088.1|BC001088 Homo sapiens, CDC20 (cell division c... 66 5e-09
dbj|D89247.1|D89247 Schizosaccharomyces pombe mRNA, partial... 66 5e-09
gb|AC084614.1|CBRG44F10 Caenorhabditis briggsae cosmid G44F... 50 6e-09
ref|NM_011778.1| Mus musculus coronin, actin binding protei... 66 7e-09
gb|AF143956.1|AF143956 Mus musculus coronin-2 mRNA, complet... 66 7e-09
emb|Y15054.1|RNY15054 Rattus norvegicus mRNA for 70 kDa tum... 66 7e-09
dbj|AB010098.1|AB010098 Homo sapiens mRNA for ClipinC, comp... 66 7e-09
gb|BC001652.1|BC001652 Homo sapiens, nuclear phosphoprotein... 66 7e-09
dbj|AB042102.1|AB042102 Oryza sativa SEC31 mRNA, complete cds 66 7e-09
dbj|AB070894.1|AB070894 Mus musculus mRNA for clipin E/coro... 65 9e-09
dbj|AK011064.1|AK011064 Mus musculus 13 days embryo liver c... 65 9e-09
ref|NM_106648.1| putative coatomer protein complex, subunit... 65 9e-09
ref|NM_130197.1| putative photomorphogenesis repressor protein 65 9e-09
dbj|AB070896.1|AB070896 Mus musculus mRNA for clipin E/coro... 65 9e-09
emb|X59720.2|SCCHRIII S.cerevisiae chromosome III complete ... 65 9e-09
gb|U94746.1|ATU94746 Arabidopsis thaliana WD repeat protein... 65 9e-09
ref|NM_030581.1| Homo sapiens hypothetical protein FLJ12270... 65 9e-09
gb|BC004519.1|BC004519 Homo sapiens, clone MGC:11230 IMAGE:... 65 9e-09
ref|NM_126132.1| putative protein 65 9e-09
gb|AY057698.1| Arabidopsis thaliana AT5g67320/K8K14_4 mRNA,... 65 9e-09
gb|AF135455.1|AF135455 Arabidopsis thaliana phytochrome A s... 65 9e-09
ref|NM_033284.1| Homo sapiens transducin beta-like 1 protei... 65 1e-08
gb|AF332220.1|AF332220 Homo sapiens transducin beta-like 1 ... 65 1e-08
ref|NM_104114.1| coatomer complex subunit, putative 65 1e-08
gb|BC008025.1|BC008025 Homo sapiens, clone MGC:15992 IMAGE:... 65 1e-08
gb|BC009761.1|BC009761 Homo sapiens, clone IMAGE:3938571, m... 65 1e-08
dbj|AK004277.1|AK004277 Mus musculus 18 days embryo whole b... 65 1e-08
gb|AF332221.1|AF332221 Homo sapiens transducin beta-like 1 ... 65 1e-08
gb|AF332222.1|AF332222 Homo sapiens transducin beta-like 1 ... 65 1e-08
ref|NM_032259.1| Homo sapiens hypothetical protein DKFZp434... 65 1e-08
emb|AL136863.1|HSM801831 Homo sapiens mRNA; cDNA DKFZp434F0... 65 1e-08
gb|AF124742.1|AF124742 Euprymna scolopes guanine nucleotide... 65 2e-08
emb|AJ427856.1|DDI427856 Dictyostelium discoideum ORF encod... 65 2e-08
emb|AL109832.1|SPAC630 S.pombe chromosome I cosmid c630 65 2e-08
emb|AJ298991.1|FSY298991 Fagus sylvatica partial mRNA for G... 65 2e-08
gb|U92792.2|SPU92792 Schizosaccharomyces pombe general tran... 65 2e-08
gb|U20939.1|YSCL9576 Saccharomyces cerevisiae chromosome XI... 65 2e-08
gb|AF052575.1|AF052575 Spisula solidissima Cdc20 mRNA, comp... 65 2e-08
dbj|AK000552.1|AK000552 Homo sapiens cDNA FLJ20545 fis, clo... 64 2e-08
ref|NM_080848.1| Mus musculus Bmp2-induced gene (Big-pendin... 64 2e-08
gb|AF416510.1|AF416510 Mus musculus WD repeat protein BIG-3... 64 2e-08
gb|AF368031.1|AF368031 Heliothis virescens receptor for act... 64 2e-08
dbj|AB005589.1|AB005589 Schizosaccharomyces pombe mRNA for ... 64 2e-08
emb|Z74243.1|SCYDL195W S.cerevisiae chromosome IV reading f... 64 2e-08
ref|NM_052820.1| Homo sapiens coronin, actin binding protei... 64 2e-08
gb|BC011690.1|BC011690 Homo sapiens, clone MGC:19551 IMAGE:... 64 2e-08
gb|BC001635.1|BC001635 Homo sapiens, Similar to hypothetica... 64 2e-08
ref|NM_100988.1| hypothetical protein 64 2e-08
dbj|AK009247.1|AK009247 Mus musculus adult male tongue cDNA... 64 2e-08
emb|AL590442.1|CNS07EG9 chromosome II of strain GB-M1 of En... 64 2e-08
emb|Z67751.1|SC38KCXVI S.cerevisiae DNA (chromosome XVI; 38... 64 2e-08
emb|X83276.1|SCDNAIV S.cerevisiae DNA for ORFs from chromos... 64 2e-08
emb|AL132675.1|SPAC144 S.pombe chromosome I cosmid c144 64 2e-08
dbj|AK025810.1|AK025810 Homo sapiens cDNA: FLJ22157 fis, cl... 64 2e-08
ref|NM_003389.2| Homo sapiens coronin, actin binding protei... 64 2e-08
ref|XM_005526.5| Homo sapiens similar to coronin, actin-bin... 64 2e-08
ref|NM_101831.1| hypothetical protein 64 2e-08
gb|BC000010.1|BC000010 Homo sapiens, coronin, actin-binding... 64 2e-08
ref|NM_017588.1| Homo sapiens WD repeat domain 5 (WDR5), tr... 64 2e-08
ref|NM_052821.1| Homo sapiens WD repeat domain 5 (WDR5), tr... 64 2e-08
emb|AJ011376.1|HSA011376 Homo sapiens mRNA for hypothetical... 64 2e-08
emb|Z73603.1|SCYPL247C S.cerevisiae chromosome XVI reading ... 64 2e-08
gb|BC016103.1|BC016103 Mus musculus, Similar to hypothetica... 64 2e-08
dbj|AK000860.1|AK000860 Homo sapiens cDNA FLJ20853 fis, clo... 64 3e-08
gb|AF052433.1|AF052433 Strongylocentrotus purpuratus katani... 64 3e-08
gb|AC006170.11|AC006170 Drosophila melanogaster, chromosome... 64 3e-08
gb|U57057.1|HSU57057 Human WD protein IR10 mRNA, complete cds 64 3e-08
gb|AE003767.1|AE003767 Drosophila melanogaster genomic scaf... 64 3e-08
ref|NM_020441.1| Homo sapiens hypothetical protein DKFZp762... 64 3e-08
gb|BC006449.1|BC006449 Homo sapiens, Similar to coronin, ac... 64 3e-08
emb|Z48179.1|SC9302X S.cerevisiae chromosome IV cosmid 9302 64 3e-08
dbj|AK014517.1|AK014517 Mus musculus 0 day neonate skin cDN... 64 3e-08
ref|NM_112468.1| putative coatomer complex subunit 64 3e-08
dbj|AK012242.1|AK012242 Mus musculus 11 days embryo whole b... 64 3e-08
gb|AY063875.1| Arabidopsis thaliana putative Srw1 protein (... 64 3e-08
gb|U49695.1|LIU49695 Leishmania infantum activated protein ... 63 5e-08
gb|AF363974.1|AF363974 Leishmania donovani strain MHOM/SD/0... 63 5e-08
gb|U27569.1|LCU27569 Leishmania chagasi activated protein k... 63 5e-08
gb|U05341.1|RRU05341 Rattus norvegicus p55CDC mRNA, complet... 63 5e-08
gb|U19027.1|YSCL8083 Saccharomyces cerevisiae chromosome XI... 63 5e-08
emb|X83704.1|SCDNAPEB1 S.cerevisiae PEB1 gene 63 5e-08
emb|X81424.1|SCPAS7 S.cerevisiae PAS7 gene 63 5e-08
gb|AF034793.1| Leishmania donovani activated protein kinase... 63 5e-08
gb|AY063079.1| Arabidopsis thaliana putative transport prot... 63 6e-08
ref|NM_111000.1| transport protein SEC13, putative 63 6e-08
gb|AC010676.6|ATAC010676 Arabidopsis thaliana chromosome II... 63 6e-08
gb|AF125254.1|AF125254 Leishmania panamensis activated prot... 63 6e-08
gb|AF370262.1|AF370262 Arabidopsis thaliana putative transp... 63 6e-08
emb|Z66568.2|SPAC12G12 S.pombe chromosome I cosmid c12G12 63 6e-08
gb|AC010870.6|ATAC010870 Arabidopsis thaliana chromosome II... 63 6e-08
gb|U15219.1|SCU15219 Saccharomyces cerevisiae Web1p (WEB1) ... 63 6e-08
gb|AF220203.1|AF220203 Malus domestica Ttg1-like protein mR... 63 6e-08
gb|AF125255.1|AF125255 Leishmania panamensis activated prot... 63 6e-08
gb|AY045860.1| Arabidopsis thaliana putative GTP binding pr... 62 8e-08
gb|U12232.1|ATU12232 Arabidopsis thaliana Columbia GTP bind... 62 8e-08
ref|NM_119611.1| GTP binding protein beta subunit 62 8e-08
emb|AL031907.1|SPCC18 S.pombe chromosome III cosmid c18 62 8e-08
gb|AF357839.1|AF357839 Leishmania donovani LACK protective ... 62 8e-08
>ref|NM_009031.1| Mus musculus retinoblastoma binding protein 7 (Rbbp7), mRNA
Length = 1748
Score = 892 bits (2305), Expect = 0.0
Identities = 425/425 (100%), Positives = 425/425 (100%)
Frame = +2
Query: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 60
MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY
Sbjct: 260 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 439
Query: 61 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 120
ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI
Sbjct: 440 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 619
Query: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 180
NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY
Sbjct: 620 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 799
Query: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 240
GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
Sbjct: 800 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 979
Query: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 980 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 1159
Query: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
Sbjct: 1160DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 1339
Query: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL 420
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL
Sbjct: 1340GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL 1519
Query: 421 EGQGS 425
EGQGS
Sbjct: 1520EGQGS 1534
>gb|U35142.1|MMU35142 Mus musculus retinoblastoma-binding protein (mRbAp46) mRNA,
complete cds
Length = 1748
Score = 892 bits (2305), Expect = 0.0
Identities = 425/425 (100%), Positives = 425/425 (100%)
Frame = +2
Query: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 60
MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY
Sbjct: 260 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 439
Query: 61 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 120
ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI
Sbjct: 440 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 619
Query: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 180
NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY
Sbjct: 620 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 799
Query: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 240
GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
Sbjct: 800 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 979
Query: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 980 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 1159
Query: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
Sbjct: 1160DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 1339
Query: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL 420
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL
Sbjct: 1340GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL 1519
Query: 421 EGQGS 425
EGQGS
Sbjct: 1520EGQGS 1534
>gb|BC003785.1|BC003785 Mus musculus, retinoblastoma binding protein 7, clone MGC:6013
IMAGE:3600013, mRNA, complete cds
Length = 1918
Score = 892 bits (2305), Expect = 0.0
Identities = 425/425 (100%), Positives = 425/425 (100%)
Frame = +1
Query: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 60
MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY
Sbjct: 250 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 429
Query: 61 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 120
ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI
Sbjct: 430 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 609
Query: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 180
NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY
Sbjct: 610 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 789
Query: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 240
GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
Sbjct: 790 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 969
Query: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 970 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 1149
Query: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
Sbjct: 1150DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 1329
Query: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL 420
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL
Sbjct: 1330GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL 1509
Query: 421 EGQGS 425
EGQGS
Sbjct: 1510EGQGS 1524
>ref|NM_002893.2| Homo sapiens retinoblastoma binding protein 7 (RBBP7), mRNA
Length = 1946
Score = 890 bits (2301), Expect = 0.0
Identities = 424/425 (99%), Positives = 424/425 (99%)
Frame = +3
Query: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 60
MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY
Sbjct: 288 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 467
Query: 61 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 120
ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI
Sbjct: 468 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 647
Query: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 180
NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY
Sbjct: 648 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 827
Query: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 240
GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
Sbjct: 828 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 1007
Query: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 1008LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 1187
Query: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
Sbjct: 1188DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 1367
Query: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL 420
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVT SEL
Sbjct: 1368GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 1547
Query: 421 EGQGS 425
EGQGS
Sbjct: 1548EGQGS 1562
>emb|X72841.1|HSIEF7442 H.sapiens IEF 7442 mRNA
Length = 1943
Score = 890 bits (2301), Expect = 0.0
Identities = 424/425 (99%), Positives = 424/425 (99%)
Frame = +1
Query: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 60
MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY
Sbjct: 286 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 465
Query: 61 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 120
ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI
Sbjct: 466 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 645
Query: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 180
NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY
Sbjct: 646 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 825
Query: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 240
GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
Sbjct: 826 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 1005
Query: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 1006LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 1185
Query: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
Sbjct: 1186DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 1365
Query: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL 420
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVT SEL
Sbjct: 1366GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 1545
Query: 421 EGQGS 425
EGQGS
Sbjct: 1546EGQGS 1560
>gb|U35143.1|HSU35143 Human retinoblastoma-binding protein (RbAp46) mRNA, complete cds
Length = 1929
Score = 890 bits (2301), Expect = 0.0
Identities = 424/425 (99%), Positives = 424/425 (99%)
Frame = +1
Query: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 60
MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY
Sbjct: 262 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 441
Query: 61 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 120
ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI
Sbjct: 442 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 621
Query: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 180
NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY
Sbjct: 622 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 801
Query: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 240
GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
Sbjct: 802 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 981
Query: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 982 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 1161
Query: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
Sbjct: 1162DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 1341
Query: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL 420
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVT SEL
Sbjct: 1342GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 1521
Query: 421 EGQGS 425
EGQGS
Sbjct: 1522EGQGS 1536
>ref|NM_031816.1| Rattus norvegicus retinoblastoma binding protein 7 (Rbbp7), mRNA
Length = 1947
Score = 890 bits (2301), Expect = 0.0
Identities = 424/425 (99%), Positives = 424/425 (99%)
Frame = +1
Query: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 60
MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY
Sbjct: 274 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 453
Query: 61 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 120
ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI
Sbjct: 454 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 633
Query: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 180
NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY
Sbjct: 634 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 813
Query: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 240
GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
Sbjct: 814 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 993
Query: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 994 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 1173
Query: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
Sbjct: 1174DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 1353
Query: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL 420
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVT SEL
Sbjct: 1354GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 1533
Query: 421 EGQGS 425
EGQGS
Sbjct: 1534EGQGS 1548
>gb|AF090306.1|AF090306 Rattus norvegicus retinoblastoma binding protein mRNA, complete cds
Length = 1947
Score = 890 bits (2301), Expect = 0.0
Identities = 424/425 (99%), Positives = 424/425 (99%)
Frame = +1
Query: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 60
MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY
Sbjct: 274 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 453
Query: 61 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 120
ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI
Sbjct: 454 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 633
Query: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 180
NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY
Sbjct: 634 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 813
Query: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 240
GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
Sbjct: 814 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 993
Query: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 994 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 1173
Query: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
Sbjct: 1174DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 1353
Query: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL 420
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVT SEL
Sbjct: 1354GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSEL 1533
Query: 421 EGQGS 425
EGQGS
Sbjct: 1534EGQGS 1548
>ref|XM_010272.2| Homo sapiens retinoblastoma binding protein 7 (RBBP7), mRNA
Length = 1642
Score = 603 bits (1555), Expect(2) = 0.0
Identities = 285/285 (100%), Positives = 285/285 (100%)
Frame = +3
Query: 7 FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLV 66
FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLV
Sbjct: 3 FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLV 182
Query: 67 LGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEV 126
LGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEV
Sbjct: 183 LGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEV 362
Query: 127 NRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNS 186
NRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNS
Sbjct: 363 NRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNS 542
Query: 187 NLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVA 246
NLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVA
Sbjct: 543 NLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVA 722
Query: 247 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG
Sbjct: 723 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 857
Score = 281 bits (718), Expect(2) = 0.0
Identities = 133/134 (99%), Positives = 133/134 (99%)
Frame = +2
Query: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 351
SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE
Sbjct: 857 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 1036
Query: 352 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 411
EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE
Sbjct: 1037EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 1216
Query: 412 ESDVTASELEGQGS 425
ESDVT SELEGQGS
Sbjct: 1217ESDVTTSELEGQGS 1258
Score = 47.4 bits (111), Expect = 0.003
Identities = 34/145 (23%), Positives = 60/145 (40%), Gaps = 9/145 (6%)
Frame = +3
Query: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT---------FESHKDEIFQ 321
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 348 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 527
Query: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
+ W+ + L S+ D + +WD++ +E DA+ I GH+A + D +W
Sbjct: 528 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 686
Query: 382 NPNEPWVICSVSEDNIMQIWQMAEN 406
+ + SV++D + IW N
Sbjct: 687 HLLHESLFGSVADDQKLMIWDTRSN 761
Score = 45.8 bits (107), Expect = 0.007
Identities = 24/114 (21%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Frame = +2
Query: 248 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 307
D+ + +WD R+ H ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 863 DKTVALWDLRN--LKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 1036
Query: 308 K-------------LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
+ L H +I W+P+ ++ S D + +W +++
Sbjct: 1037EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 1198
Score = 44.7 bits (104), Expect = 0.017
Identities = 28/118 (23%), Positives = 51/118 (42%), Gaps = 11/118 (9%)
Frame = +2
Query: 196 SDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWD 255
S D TV LWD+ + F H + V W +E++ S D++L +WD
Sbjct: 857 SADKTVALWDLR------NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 1018
Query: 256 --------TRSNTTSKPSHLV---DAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
+ + P L+ HTA+++ S+NP +++ + S D + +W +
Sbjct: 1019LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 1192
Score = 40.0 bits (92), Expect = 0.41
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Frame = +2
Query: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSA 227
H+ E + + W+ + L S+ D + +WD++ +E DA+ I GH+A
Sbjct: 926 HKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTA 1105
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSN 259
+ D +W+ + SV++D + IW N
Sbjct: 1106 KISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 1201
>gb|AF279275.1|AF279275 Gallus gallus Rbap46 polypeptide mRNA, complete cds
Length = 1813
Score = 839 bits (2168), Expect = 0.0
Identities = 399/425 (93%), Positives = 414/425 (96%)
Frame = +3
Query: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 60
MASKE+ EDTVEERVI+EEYKIWKKNTPFLYDLVMTHAL+WPSLTVQWLP+V++PEGKDY
Sbjct: 114 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY 293
Query: 61 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 120
ALHWLVLGTHTSDEQNHLVVARV IPNDD QFD S DS+KGEFGGFGSVTGKIE EIKI
Sbjct: 294 ALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKI 470
Query: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 180
NHEGEVNRARYMPQNP+IIATKTPS+DVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEGY
Sbjct: 471 NHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY 650
Query: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 240
GLSWNSNL GHLLSASDDHTVCLWDI+AGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
Sbjct: 651 GLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 830
Query: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
LFGSVADDQKLMIWDTRSNTTSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 831 LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 1010
Query: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
DLRNLKLKLH+FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
Sbjct: 1011DLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 1190
Query: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL 420
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE D+ A+EL
Sbjct: 1191GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAEL 1370
Query: 421 EGQGS 425
EGQG+
Sbjct: 1371EGQGT 1385
>gb|BC003092.1|BC003092 Homo sapiens, Similar to retinoblastoma binding protein 4, clone
MGC:1393 IMAGE:3356558, mRNA, complete cds
Length = 2174
Score = 800 bits (2066), Expect = 0.0
Identities = 380/426 (89%), Positives = 403/426 (94%), Gaps = 1/426 (0%)
Frame = +3
Query: 1 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
MA KE F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKD
Sbjct: 87 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 266
Query: 60 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 119
+++H LVLGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIK
Sbjct: 267 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 446
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
INHEGEVNRARYMPQNP IIATKTPSSDVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEG
Sbjct: 447 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 626
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
YGLSWN NLSGHLLSASDDHT+CLWDI+A PKEGK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 627 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 806
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
SLFGSVADDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 807 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 986
Query: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 359
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 987 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1166
Query: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASE 419
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+ + + +
Sbjct: 1167DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSV-D 1343
Query: 420 LEGQGS 425
EGQGS
Sbjct: 1344PEGQGS 1361
>ref|NM_005610.1| Homo sapiens retinoblastoma binding protein 4 (RBBP4), mRNA
Length = 2314
Score = 800 bits (2066), Expect = 0.0
Identities = 380/426 (89%), Positives = 403/426 (94%), Gaps = 1/426 (0%)
Frame = +1
Query: 1 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
MA KE F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKD
Sbjct: 85 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 264
Query: 60 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 119
+++H LVLGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIK
Sbjct: 265 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 444
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
INHEGEVNRARYMPQNP IIATKTPSSDVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEG
Sbjct: 445 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 624
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
YGLSWN NLSGHLLSASDDHT+CLWDI+A PKEGK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 625 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 804
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
SLFGSVADDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 805 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 984
Query: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 359
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 985 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1164
Query: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASE 419
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+ + + +
Sbjct: 1165DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSV-D 1341
Query: 420 LEGQGS 425
EGQGS
Sbjct: 1342PEGQGS 1359
>emb|X74262.1|HSRBAP48 H.sapiens RbAp48 mRNA encoding retinoblastoma binding protein
Length = 2314
Score = 800 bits (2066), Expect = 0.0
Identities = 380/426 (89%), Positives = 403/426 (94%), Gaps = 1/426 (0%)
Frame = +1
Query: 1 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
MA KE F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKD
Sbjct: 85 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 264
Query: 60 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 119
+++H LVLGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIK
Sbjct: 265 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 444
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
INHEGEVNRARYMPQNP IIATKTPSSDVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEG
Sbjct: 445 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 624
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
YGLSWN NLSGHLLSASDDHT+CLWDI+A PKEGK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 625 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 804
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
SLFGSVADDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 805 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 984
Query: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 359
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 985 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1164
Query: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASE 419
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+ + + +
Sbjct: 1165DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSV-D 1341
Query: 420 LEGQGS 425
EGQGS
Sbjct: 1342PEGQGS 1359
>ref|XM_018112.5| Homo sapiens retinoblastoma binding protein 4 (RBBP4), mRNA
Length = 2361
Score = 800 bits (2066), Expect = 0.0
Identities = 380/426 (89%), Positives = 403/426 (94%), Gaps = 1/426 (0%)
Frame = +2
Query: 1 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
MA KE F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKD
Sbjct: 137 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 316
Query: 60 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 119
+++H LVLGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIK
Sbjct: 317 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 496
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
INHEGEVNRARYMPQNP IIATKTPSSDVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEG
Sbjct: 497 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 676
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
YGLSWN NLSGHLLSASDDHT+CLWDI+A PKEGK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 677 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 856
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
SLFGSVADDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 857 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1036
Query: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 359
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 1037WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1216
Query: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASE 419
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+ + + +
Sbjct: 1217DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSV-D 1393
Query: 420 LEGQGS 425
EGQGS
Sbjct: 1394PEGQGS 1411
>ref|NM_009030.1| Mus musculus retinoblastoma binding protein 4 (Rbbp4), mRNA
Length = 1961
Score = 798 bits (2062), Expect = 0.0
Identities = 379/426 (88%), Positives = 403/426 (93%), Gaps = 1/426 (0%)
Frame = +3
Query: 1 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
MA KE F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKD
Sbjct: 108 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 287
Query: 60 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 119
+++H LVLGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIK
Sbjct: 288 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 467
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
INHEGEVNRARYMPQNP IIATKTPSSDVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEG
Sbjct: 468 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 647
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
YGLSWN NLSGHLLSASDDHT+CLWDI+A PK+GK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 648 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 827
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
SLFGSVADDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 828 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1007
Query: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 359
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 1008WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1187
Query: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASE 419
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+ + + +
Sbjct: 1188DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSV-D 1364
Query: 420 LEGQGS 425
EGQGS
Sbjct: 1365PEGQGS 1382
>gb|U35141.1|MMU35141 Mus musculus retinoblastoma-binding protein (mRbAp48) mRNA,
complete cds
Length = 1961
Score = 798 bits (2062), Expect = 0.0
Identities = 379/426 (88%), Positives = 403/426 (93%), Gaps = 1/426 (0%)
Frame = +3
Query: 1 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
MA KE F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKD
Sbjct: 108 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 287
Query: 60 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 119
+++H LVLGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIK
Sbjct: 288 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 467
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
INHEGEVNRARYMPQNP IIATKTPSSDVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEG
Sbjct: 468 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 647
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
YGLSWN NLSGHLLSASDDHT+CLWDI+A PK+GK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 648 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 827
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
SLFGSVADDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 828 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1007
Query: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 359
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 1008WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1187
Query: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASE 419
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+ + + +
Sbjct: 1188DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSV-D 1364
Query: 420 LEGQGS 425
EGQGS
Sbjct: 1365PEGQGS 1382
>gb|AF097750.1|AF097750 Gallus gallus chromatin assembly factor 1 p48 subunit mRNA,
complete cds
Length = 2400
Score = 796 bits (2057), Expect = 0.0
Identities = 379/426 (88%), Positives = 402/426 (93%), Gaps = 1/426 (0%)
Frame = +2
Query: 1 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
MA KE F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKD
Sbjct: 80 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 259
Query: 60 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 119
+++H LVLGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIK
Sbjct: 260 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 439
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
INHEGEVNRARYMPQNP IIATKTPSSDVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEG
Sbjct: 440 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 619
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
YGLSWN NLSGHLLSASDDHT+CLWDI+A PKEGK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 620 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 799
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
SLFGSVADDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 800 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 979
Query: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 359
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 980 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1159
Query: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASE 419
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENI NDE+ + + +
Sbjct: 1160DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENINNDEDPEGSV-D 1336
Query: 420 LEGQGS 425
EGQGS
Sbjct: 1337PEGQGS 1354
>gb|AF073787.1|AF073787 Xenopus laevis retinoblastoma A associated protein mRNA, complete
cds
Length = 1972
Score = 786 bits (2031), Expect = 0.0
Identities = 373/426 (87%), Positives = 401/426 (93%), Gaps = 1/426 (0%)
Frame = +1
Query: 1 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
MA KE F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWL +VT+P+GKD
Sbjct: 331 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLSDVTRPDGKD 510
Query: 60 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 119
+++H LVLGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIK
Sbjct: 511 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 690
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
I H+GEVNRARYMPQNP IIATKTP+SDVLVFDYTKHP+KPDPSGECNP+LRLRGHQKEG
Sbjct: 691 ITHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPNLRLRGHQKEG 870
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
YGLSWN NLSG+LLSASDDHT+CLWDI+A PKEGK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 871 YGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 1050
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
SLFGSVADDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 1051SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1230
Query: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 359
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 1231WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1410
Query: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASE 419
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+++ +
Sbjct: 1411DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDTE-GGVD 1587
Query: 420 LEGQGS 425
EGQGS
Sbjct: 1588PEGQGS 1605
>ref|NM_079630.1| Drosophila melanogaster Chromatin assembly factor 1 subunit (Caf1),
mRNA
Length = 1849
Score = 779 bits (2012), Expect = 0.0
Identities = 361/417 (86%), Positives = 393/417 (93%)
Frame = +3
Query: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 64
E F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VTK +GKDY++H
Sbjct: 345 ESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHR 524
Query: 65 LVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEG 124
L+LGTHTSDEQNHL++A V +P++DAQFD SH D++KGEFGGFGSV GKIE EIKINHEG
Sbjct: 525 LILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEG 704
Query: 125 EVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSW 184
EVNRARYMPQN +IATKTPSSDVLVFDYTKHP+KP+PSGEC PDLRLRGHQKEGYGLSW
Sbjct: 705 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSW 884
Query: 185 NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGS 244
N NL+G+LLSASDDHT+CLWDINA PKE +++DAK IFTGH+AVVEDVAWHLLHESLFGS
Sbjct: 885 NPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGS 1064
Query: 245 VADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 304
VADDQKLMIWDTR+N TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN
Sbjct: 1065VADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 1244
Query: 305 LKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPE 364
LKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPE
Sbjct: 1245LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 1424
Query: 365 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELE 421
LLFIHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQ+WQMAEN+YNDEE ++ ASELE
Sbjct: 1425LLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELE 1595
Score = 50.1 bits (118), Expect = 4e-04
Identities = 36/162 (22%), Positives = 65/162 (39%), Gaps = 7/162 (4%)
Frame = +3
Query: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 181
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 1143 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 1295
Query: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 234
+ W+ + L S+ D + +WD++ +E DA+ I GH+A + D +W
Sbjct: 1296 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 1475
Query: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVN 276
+ + SV++D + +W N + + A E N
Sbjct: 1476 NPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETN 1601
>gb|AY061408.1| Drosophila melanogaster LD33761 full length cDNA
Length = 1849
Score = 779 bits (2012), Expect = 0.0
Identities = 361/417 (86%), Positives = 393/417 (93%)
Frame = +3
Query: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 64
E F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VTK +GKDY++H
Sbjct: 345 ESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHR 524
Query: 65 LVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEG 124
L+LGTHTSDEQNHL++A V +P++DAQFD SH D++KGEFGGFGSV GKIE EIKINHEG
Sbjct: 525 LILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEG 704
Query: 125 EVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSW 184
EVNRARYMPQN +IATKTPSSDVLVFDYTKHP+KP+PSGEC PDLRLRGHQKEGYGLSW
Sbjct: 705 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSW 884
Query: 185 NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGS 244
N NL+G+LLSASDDHT+CLWDINA PKE +++DAK IFTGH+AVVEDVAWHLLHESLFGS
Sbjct: 885 NPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGS 1064
Query: 245 VADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 304
VADDQKLMIWDTR+N TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN
Sbjct: 1065VADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 1244
Query: 305 LKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPE 364
LKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPE
Sbjct: 1245LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 1424
Query: 365 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELE 421
LLFIHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQ+WQMAEN+YNDEE ++ ASELE
Sbjct: 1425LLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELE 1595
Score = 50.1 bits (118), Expect = 4e-04
Identities = 36/162 (22%), Positives = 65/162 (39%), Gaps = 7/162 (4%)
Frame = +3
Query: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 181
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 1143 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 1295
Query: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 234
+ W+ + L S+ D + +WD++ +E DA+ I GH+A + D +W
Sbjct: 1296 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 1475
Query: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVN 276
+ + SV++D + +W N + + A E N
Sbjct: 1476 NPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETN 1601
>gb|U62388.1|DMU62388 Drosophila melanogaster chromatin assembly factor 1 p55 subunit
(p55) mRNA, complete cds
Length = 1807
Score = 779 bits (2012), Expect = 0.0
Identities = 361/417 (86%), Positives = 393/417 (93%)
Frame = +1
Query: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 64
E F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VTK +GKDY++H
Sbjct: 319 ESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHR 498
Query: 65 LVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEG 124
L+LGTHTSDEQNHL++A V +P++DAQFD SH D++KGEFGGFGSV GKIE EIKINHEG
Sbjct: 499 LILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEG 678
Query: 125 EVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSW 184
EVNRARYMPQN +IATKTPSSDVLVFDYTKHP+KP+PSGEC PDLRLRGHQKEGYGLSW
Sbjct: 679 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSW 858
Query: 185 NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGS 244
N NL+G+LLSASDDHT+CLWDINA PKE +++DAK IFTGH+AVVEDVAWHLLHESLFGS
Sbjct: 859 NPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGS 1038
Query: 245 VADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 304
VADDQKLMIWDTR+N TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN
Sbjct: 1039VADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 1218
Query: 305 LKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPE 364
LKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPE
Sbjct: 1219LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 1398
Query: 365 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELE 421
LLFIHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQ+WQMAEN+YNDEE ++ ASELE
Sbjct: 1399LLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELE 1569
Score = 50.1 bits (118), Expect = 4e-04
Identities = 36/162 (22%), Positives = 65/162 (39%), Gaps = 7/162 (4%)
Frame = +1
Query: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 181
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 1117 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 1269
Query: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 234
+ W+ + L S+ D + +WD++ +E DA+ I GH+A + D +W
Sbjct: 1270 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 1449
Query: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVN 276
+ + SV++D + +W N + + A E N
Sbjct: 1450 NPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETN 1575
>emb|X71810.1|HSIEF9306 H.sapiens IEF 9306 mRNA
Length = 1417
Score = 778 bits (2009), Expect = 0.0
Identities = 367/404 (90%), Positives = 386/404 (94%), Gaps = 1/404 (0%)
Frame = +2
Query: 1 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
MA KE F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKD
Sbjct: 74 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 253
Query: 60 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 119
+++H LVLGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIK
Sbjct: 254 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 433
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
INHEGEVNRARYMPQNP IIATKTPSSDVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEG
Sbjct: 434 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 613
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
YGLSWN NLSGHLLSASDDHT+CLWDI+A PKEGK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 614 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 793
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
SLFGSVADDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 794 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 973
Query: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 359
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 974 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1153
Query: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQM
Sbjct: 1154DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 1285
Score = 58.5 bits (140), Expect = 1e-06
Identities = 43/163 (26%), Positives = 69/163 (41%), Gaps = 12/163 (7%)
Frame = +2
Query: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHTFESHKDE 318
H EVN + P + I+AT + V ++D N L+L H+ E
Sbjct: 440 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLR---GHQKE 610
Query: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 378
+ + W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D
Sbjct: 611 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVED 769
Query: 379 FSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELE 421
SW+ + SV++D + IW N + V A E
Sbjct: 770 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 898
>gb|AE003708.2|AE003708 Drosophila melanogaster genomic scaffold 142000013386035 section 33 of
105, complete sequence
Length = 235457
Score = 451 bits (1161), Expect(2) = 0.0
Identities = 210/234 (89%), Positives = 225/234 (95%)
Frame = +2
Query: 188 LSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVAD 247
L+G+LLSASDDHT+CLWDINA PKE +++DAK IFTGH+AVVEDVAWHLLHESLFGSVAD
Sbjct: 29201 LTGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD 29380
Query: 248 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 307
DQKLMIWDTR+N TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL
Sbjct: 29381 DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 29560
Query: 308 KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLF 367
KLH+FESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLF
Sbjct: 29561 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 29740
Query: 368 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELE 421
IHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQ+WQMAEN+YNDEE ++ ASELE
Sbjct: 29741 IHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELE 29902
Score = 336 bits (862), Expect(2) = 0.0
Identities = 153/186 (82%), Positives = 171/186 (91%)
Frame = +3
Query: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 64
E F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VTK +GKDY++H
Sbjct: 28542 ESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHR 28721
Query: 65 LVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEG 124
L+LGTHTSDEQNHL++A V +P++DAQFD SH D++KGEFGGFGSV GKIE EIKINHEG
Sbjct: 28722 LILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEG 28901
Query: 125 EVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSW 184
EVNRARYMPQN +IATKTPSSDVLVFDYTKHP+KP+PSGEC PDLRLRGHQKEGYGLSW
Sbjct: 28902 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSW 29081
Query: 185 NSNLSG 190
N NL+G
Sbjct: 29082 NPNLNG 29099
Score = 50.1 bits (118), Expect = 4e-04
Identities = 36/162 (22%), Positives = 65/162 (39%), Gaps = 7/162 (4%)
Frame = +2
Query: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 181
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 29450 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 29602
Query: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 234
+ W+ + L S+ D + +WD++ +E DA+ I GH+A + D +W
Sbjct: 29603 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 29782
Query: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVN 276
+ + SV++D + +W N + + A E N
Sbjct: 29783 NPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETN 29908
>gb|AC009904.7| Drosophila melanogaster, chromosome 3R, region 88E-88E, BAC clone
BACR32A03, complete sequence
Length = 182601
Score = 451 bits (1161), Expect(2) = 0.0
Identities = 210/234 (89%), Positives = 225/234 (95%)
Frame = +3
Query: 188 LSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVAD 247
L+G+LLSASDDHT+CLWDINA PKE +++DAK IFTGH+AVVEDVAWHLLHESLFGSVAD
Sbjct: 136653 LTGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD 136832
Query: 248 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 307
DQKLMIWDTR+N TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL
Sbjct: 136833 DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 137012
Query: 308 KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLF 367
KLH+FESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLF
Sbjct: 137013 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 137192
Query: 368 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELE 421
IHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQ+WQMAEN+YNDEE ++ ASELE
Sbjct: 137193 IHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELE 137354
Score = 336 bits (862), Expect(2) = 0.0
Identities = 153/186 (82%), Positives = 171/186 (91%)
Frame = +1
Query: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 64
E F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VTK +GKDY++H
Sbjct: 135994 ESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHR 136173
Query: 65 LVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEG 124
L+LGTHTSDEQNHL++A V +P++DAQFD SH D++KGEFGGFGSV GKIE EIKINHEG
Sbjct: 136174 LILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEG 136353
Query: 125 EVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSW 184
EVNRARYMPQN +IATKTPSSDVLVFDYTKHP+KP+PSGEC PDLRLRGHQKEGYGLSW
Sbjct: 136354 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSW 136533
Query: 185 NSNLSG 190
N NL+G
Sbjct: 136534 NPNLNG 136551
Score = 50.1 bits (118), Expect = 4e-04
Identities = 36/162 (22%), Positives = 65/162 (39%), Gaps = 7/162 (4%)
Frame = +3
Query: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 181
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 136902 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 137054
Query: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 234
+ W+ + L S+ D + +WD++ +E DA+ I GH+A + D +W
Sbjct: 137055 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 137234
Query: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVN 276
+ + SV++D + +W N + + A E N
Sbjct: 137235 NPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETN 137360
>ref|XM_030409.1| Homo sapiens similar to retinoblastoma-binding protein 4; RbAp48;
chromatin assembly factor/CAF-1 p48 subunit; MSI1
protein homolog; retinoblastoma-binding protein p48
(LOC115197), mRNA
Length = 2305
Score = 754 bits (1946), Expect = 0.0
Identities = 361/426 (84%), Positives = 393/426 (91%), Gaps = 1/426 (0%)
Frame = +1
Query: 1 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
MA KE F++TVEE VIN+EYKIWKKNTPFLY+LVMTHAL+WPSLT QWLP+VT+PEGKD
Sbjct: 85 MADKEAAFDNTVEE*VINKEYKIWKKNTPFLYNLVMTHALEWPSLTAQWLPDVTRPEGKD 264
Query: 60 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 119
++LH LVLGTHTSDEQNHLV+A V +P+DDAQFDASH D +KGEFGGFGSV+GKIE EIK
Sbjct: 265 FSLHRLVLGTHTSDEQNHLVIASVQLPDDDAQFDASHYDREKGEFGGFGSVSGKIEIEIK 444
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
INHEG+VNRARYMPQNP II TKTPSSD+LVFDYTKHP+KPDPSGECNPDLRLRGHQKEG
Sbjct: 445 INHEGKVNRARYMPQNPCIITTKTPSSDILVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 624
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
YGLSWN NLSGHLLSASDDHT+CLWDI+A PKEGK+VDAK IFTGH+A+VEDV+WHLL E
Sbjct: 625 YGLSWNLNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAIVEDVSWHLLCE 804
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
SLFGSVADDQKLMIWDTRSN TSKPSH VD HTAEVNCLSF+PYSEFILATGSADKTVAL
Sbjct: 805 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDTHTAEVNCLSFSPYSEFILATGSADKTVAL 984
Query: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 359
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTD R NV DLSKIGEEQS EDAE
Sbjct: 985 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDHRPNV*DLSKIGEEQSPEDAE 1164
Query: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASE 419
D PPELLFIHGGHTAKI DFSWNP+EP V+CSVSEDNIMQ+WQMAENIYNDE+ + + +
Sbjct: 1165DRPPELLFIHGGHTAKIPDFSWNPSEP*VMCSVSEDNIMQVWQMAENIYNDEDPE-GSMD 1341
Query: 420 LEGQGS 425
EGQGS
Sbjct: 1342PEGQGS 1359
>ref|XM_030423.1| Homo sapiens similar to retinoblastoma binding protein 4 (H.
sapiens) (LOC153102), mRNA
Length = 1401
Score = 732 bits (1889), Expect = 0.0
Identities = 348/404 (86%), Positives = 376/404 (92%), Gaps = 1/404 (0%)
Frame = +1
Query: 1 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
MA KE F++TVEE VIN+EYKIWKKNTPFLY+LVMTHAL+WPSLT QWLP+VT+PEGKD
Sbjct: 64 MADKEAAFDNTVEE*VINKEYKIWKKNTPFLYNLVMTHALEWPSLTAQWLPDVTRPEGKD 243
Query: 60 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 119
++LH LVLGTHTSDEQNHLV+A V +P+DDAQFDASH D +KGEFGGFGSV+GKIE EIK
Sbjct: 244 FSLHRLVLGTHTSDEQNHLVIASVQLPDDDAQFDASHYDREKGEFGGFGSVSGKIEIEIK 423
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
INHEG+VNRARYMPQNP II TKTPSSD+LVFDYTKHP+KPDPSGECNPDLRLRGHQKEG
Sbjct: 424 INHEGKVNRARYMPQNPCIITTKTPSSDILVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 603
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
YGLSWN NLSGHLLSASDDHT+CLWDI+A PKEGK+VDAK IFTGH+A+VEDV+WHLL E
Sbjct: 604 YGLSWNLNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAIVEDVSWHLLCE 783
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
SLFGSVADDQKLMIWDTRSN TSKPSH VD HTAEVNCLSF+PYSEFILATGSADKTVAL
Sbjct: 784 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDTHTAEVNCLSFSPYSEFILATGSADKTVAL 963
Query: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 359
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTD R NV DLSKIGEEQS EDAE
Sbjct: 964 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDHRPNV*DLSKIGEEQSPEDAE 1143
Query: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
D PPELLFIHGGHTAKI DFSWNP+EP V+CSVSEDNIMQ+WQM
Sbjct: 1144DRPPELLFIHGGHTAKIPDFSWNPSEP*VMCSVSEDNIMQVWQM 1275
>gb|BC015123.1|BC015123 Homo sapiens, Similar to retinoblastoma-binding protein 4, clone
IMAGE:3686783, mRNA, partial cds
Length = 2071
Score = 692 bits (1786), Expect = 0.0
Identities = 329/365 (90%), Positives = 347/365 (94%)
Frame = +1
Query: 61 ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 120
++H LVLGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIKI
Sbjct: 4 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 183
Query: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 180
NHEGEVNRARYMPQNP IIATKTPSSDVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEGY
Sbjct: 184 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY 363
Query: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 240
GLSWN NLSGHLLSASDDHT+CLWDI+A PKEGK+VDAK IFTGH+AVVEDV+WHLLHES
Sbjct: 364 GLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES 543
Query: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
LFGSVADDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 544 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 723
Query: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
DLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAED
Sbjct: 724 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAED 903
Query: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASEL 420
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+ + + +
Sbjct: 904 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSV-DP 1080
Query: 421 EGQGS 425
EGQGS
Sbjct: 1081EGQGS 1095
>emb|AL390237.9|AL390237 Human DNA sequence from clone RP11-278J20 on chromosome 6. Contains
ESTs, STSs and GSSs. Contains an RBBP4
(retinoblastoma-binding protein 4) pseudogene and a
KIAA0797 pseudogene, complete sequence [Homo sapiens]
Length = 140120
Score = 363 bits (933), Expect(3) = 0.0
Identities = 171/215 (79%), Positives = 188/215 (86%), Gaps = 1/215 (0%)
Frame = +1
Query: 1 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
MA KE F+D VEERVINEEYK WKKNTPFLYDLV+THAL+WPSLT QWLP+VT+PEGKD
Sbjct: 32392 MADKEAAFDDAVEERVINEEYKKWKKNTPFLYDLVLTHALEWPSLTAQWLPDVTRPEGKD 32571
Query: 60 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 119
+++H LVLGT T DEQNHLV+A V +PNDD QFDASH +++KGEFGGF SV GKIE EI
Sbjct: 32572 FSIHQLVLGTCTLDEQNHLVIASVQLPNDDTQFDASHYNTEKGEFGGFYSVRGKIEIEIN 32751
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
INHEGEVN+ RYMPQNP II+TKTPSSDVLVFDYTKHP+KPDPSGECNPDL L GHQKEG
Sbjct: 32752 INHEGEVNKVRYMPQNPCIISTKTPSSDVLVFDYTKHPSKPDPSGECNPDLCLCGHQKEG 32931
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 214
YGLSWN NL GHLL ASDDHT CLWD +A PKEGK
Sbjct: 32932 YGLSWNPNLCGHLLGASDDHTSCLWDSSAVPKEGK 33036
Score = 247 bits (630), Expect(3) = 0.0
Identities = 121/149 (81%), Positives = 132/149 (88%)
Frame = +3
Query: 277 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSG 336
CLSFNPYSEFILATGSADKTVAL DLRNLKLKLH+FE KD+IFQV WSPHNETILASSG
Sbjct: 33234 CLSFNPYSEFILATGSADKTVALRDLRNLKLKLHSFELLKDKIFQVQWSPHNETILASSG 33413
Query: 337 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 396
T+ RLNVWDLSKIGE+QS ED +D PPELLFIHGGHTAKI DFS NPNEPWVICSV EDN
Sbjct: 33414 TNHRLNVWDLSKIGEKQSPEDKKDRPPELLFIHGGHTAKIPDFSGNPNEPWVICSVPEDN 33593
Query: 397 IMQIWQMAENIYNDEESDVTASELEGQGS 425
IMQ+WQMAENIYN+E+ + + + EGQ S
Sbjct: 33594 IMQVWQMAENIYNNEDPEGSV-DPEGQES 33677
Score = 113 bits (283), Expect(3) = 0.0
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2
Query: 214 KIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTA 273
K+VD K IFTGH+AVVEDV+WHLLHESLFGSVADDQKLMIWDT SN+ SKPSH VDAHTA
Sbjct: 33035 KVVDVKIIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTCSNSASKPSHSVDAHTA 33214
Query: 274 EV 275
EV
Sbjct: 33215 EV 33220
Score = 35.8 bits (81), Expect = 7.7
Identities = 22/96 (22%), Positives = 45/96 (45%)
Frame = +1
Query: 306 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
K+++ +H+ E+ +V + P N I+++ + V+D +K + + + P+L
Sbjct: 32731 KIEIEININHEGEVNKVRYMPQNPCIISTKTPSSDVLVFDYTK--HPSKPDPSGECNPDL 32904
Query: 366 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
GH + SWNPN + S+D+ +W
Sbjct: 32905 CLC--GHQKEGYGLSWNPNLCGHLLGASDDHTSCLW 33006
Score = 33.1 bits (74), Expect(2) = 0.021
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 364 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELE 421
++ I GHTA + D SW+ + SV++D + IW N + V A E
Sbjct: 33044 DVKIIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTCSNSASKPSHSVDAHTAE 33217
Score = 30.0 bits (66), Expect(2) = 0.021
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 9/99 (9%)
Frame = +1
Query: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFES---------HKDEIFQ 321
H EVN + + P + I++T + V ++D K H+ E +
Sbjct: 32758 HEGEVNKVRYMPQNPCIISTKTPSSDVLVFDYTKHPSKPDPSGECNPDLCLCGHQKEGYG 32937
Query: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
+ W+P+ L + D +WD S + +E + ED
Sbjct: 32938 LSWNPNLCGHLLGASDDHTSCLWDSSAVPKEGKSGGCED 33054
>gb|AE000658.1|HUAE000658 Homo sapiens T-cell receptor alpha delta locus from bases 1 to 250529
(section 1 of 5) of the Complete Nucleotide Sequence
Length = 250529
Score = 574 bits (1479), Expect(3) = 0.0
Identities = 283/340 (83%), Positives = 304/340 (89%)
Frame = +3
Query: 86 PNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPS 145
PND+A FDASH DS+KGEFGGFGSV+G IE EIKINHEGEVNRARYMPQN II TKTPS
Sbjct: 69849 PNDNA*FDASHYDSEKGEFGGFGSVSGNIEIEIKINHEGEVNRARYMPQNSCIIKTKTPS 70028
Query: 146 SDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWD 205
SDVLVFDYTK+P+KPDPSGECNPDLRL GHQKEGYGLSWN NLSGHLLSASDDHTVCLWD
Sbjct: 70029 SDVLVFDYTKYPSKPDPSGECNPDLRLCGHQKEGYGLSWNPNLSGHLLSASDDHTVCLWD 70208
Query: 206 INAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS 265
I+A PKEGK VDA+ IFTGH+AVVEDV W+LLHESLF VADDQKLMIWDTRS TSKPS
Sbjct: 70209 ISAIPKEGK-VDARTIFTGHTAVVEDVFWNLLHESLFRLVADDQKLMIWDTRSKNTSKPS 70385
Query: 266 HLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWS 325
H VDA+TAEVNCLSFNPY EFILATGSADKTVALWDLRNLKLK+H+FESHKDEIFQV WS
Sbjct: 70386 HSVDAYTAEVNCLSFNPYGEFILATGSADKTVALWDLRNLKLKVHSFESHKDEIFQVQWS 70565
Query: 326 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNE 385
PHNETILASSGTD LNVWDLSKI EEQS EDAED PPE LFIHGGHTAKI DFS NP+E
Sbjct: 70566 PHNETILASSGTDHGLNVWDLSKITEEQSPEDAEDRPPE-LFIHGGHTAKIPDFSLNPSE 70742
Query: 386 PWVICSVSEDNIMQIWQMAENIYNDEESDVTASELEGQGS 425
PW+ICSVSE+NIM++WQMAENI N E+ + + + EGQ S
Sbjct: 70743 PWMICSVSENNIMEVWQMAENISNGEDPEGSV-DPEGQES 70859
Score = 68.9 bits (167), Expect(3) = 0.0
Identities = 30/41 (73%), Positives = 36/41 (87%)
Frame = +1
Query: 43 SLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARV 83
SLTVQWLP+ +PEGKD+++H LVLGTHT DEQNHLV+A V
Sbjct: 69721 SLTVQWLPDEIRPEGKDFSIHRLVLGTHTLDEQNHLVIASV 69843
Score = 57.8 bits (138), Expect(3) = 0.0
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +2
Query: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPS 43
RVIN+EYKI KKNTPFLY LVMTHAL+WP+
Sbjct: 69635 RVINDEYKIRKKNTPFLYHLVMTHALEWPA 69724
>gb|AF116530.1|AF116530 Caenorhabditis elegans synthetic multivulva protein LIN-53 p48
(lin-53) mRNA, complete cds
Length = 1470
Score = 635 bits (1637), Expect = e-180
Identities = 294/416 (70%), Positives = 352/416 (83%)
Frame = +2
Query: 8 EDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVL 67
+ T E+RV N+EYKIWKKNTPFLYDLVMTHAL+WPSL+VQWLP+V K + D+ +H L+L
Sbjct: 41 DGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAK-DNSDHTIHRLIL 217
Query: 68 GTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVN 127
GTHTSDEQNHL+++++ +P DDAQFDAS D+++ E+GGFG+V GK+E +I+INHEGEVN
Sbjct: 218 GTHTSDEQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVN 397
Query: 128 RARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSN 187
RARYMPQ +IIATK+P +DV +FDY KH A P + NP +RL+GH KEGYGLSWN N
Sbjct: 398 RARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDN-TFNPLIRLKGHTKEGYGLSWNPN 574
Query: 188 LSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVAD 247
G +LSASDD TVC WDINA + AK +F GH +VVEDVAWH+LH+ +FGSV D
Sbjct: 575 KEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGD 754
Query: 248 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 307
D+KL+IWD R TS P H +DAH+AEVNCL+FNPYSEFILATGSADKTVALWDLRNL++
Sbjct: 755 DKKLLIWDVR---TSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRM 925
Query: 308 KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLF 367
KLH+FESH+DEIFQV WSPHNETILASSGTD+RL+VWDLSKIGE+QSAEDAEDGPPELLF
Sbjct: 926 KLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLF 1105
Query: 368 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELEGQ 423
IHGGHTAKISDFSWNPNEPWV+CSVSEDNI+Q+WQMA+NIYN+ + + A +E Q
Sbjct: 1106IHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPADVVERQ 1273
>ref|NM_060151.1| chromatin assembly factor 1 P55 subunit like
Length = 1254
Score = 635 bits (1637), Expect = e-180
Identities = 294/416 (70%), Positives = 352/416 (83%)
Frame = +1
Query: 8 EDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVL 67
+ T E+RV N+EYKIWKKNTPFLYDLVMTHAL+WPSL+VQWLP+V K + D+ +H L+L
Sbjct: 16 DGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAK-DNSDHTIHRLIL 192
Query: 68 GTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVN 127
GTHTSDEQNHL+++++ +P DDAQFDAS D+++ E+GGFG+V GK+E +I+INHEGEVN
Sbjct: 193 GTHTSDEQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVN 372
Query: 128 RARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSN 187
RARYMPQ +IIATK+P +DV +FDY KH A P + NP +RL+GH KEGYGLSWN N
Sbjct: 373 RARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDN-TFNPLIRLKGHTKEGYGLSWNPN 549
Query: 188 LSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVAD 247
G +LSASDD TVC WDINA + AK +F GH +VVEDVAWH+LH+ +FGSV D
Sbjct: 550 KEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGD 729
Query: 248 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 307
D+KL+IWD R TS P H +DAH+AEVNCL+FNPYSEFILATGSADKTVALWDLRNL++
Sbjct: 730 DKKLLIWDVR---TSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRM 900
Query: 308 KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLF 367
KLH+FESH+DEIFQV WSPHNETILASSGTD+RL+VWDLSKIGE+QSAEDAEDGPPELLF
Sbjct: 901 KLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLF 1080
Query: 368 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELEGQ 423
IHGGHTAKISDFSWNPNEPWV+CSVSEDNI+Q+WQMA+NIYN+ + + A +E Q
Sbjct: 1081IHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPADVVERQ 1248
>ref|XM_069157.2| Homo sapiens similar to CHROMATIN ASSEMBLY FACTOR 1 P48 SUBUNIT
(CAF-1 P48 SUBUNIT) (RETINOBLASTOMA BINDING PROTEIN P48)
(RETINOBLASTOMA-BINDING PROTEIN 4) (MSI1 PROTEIN
HOMOLOG) (LOC135054), mRNA
Length = 1221
Score = 624 bits (1610), Expect = e-177
Identities = 315/429 (73%), Positives = 346/429 (80%), Gaps = 4/429 (0%)
Frame = +1
Query: 1 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
MA KE F+DTVEERVINEEYK WKKNTPFLYDLV+THA++WPSLT QWLP+V +PEGKD
Sbjct: 1 MADKEAAFDDTVEERVINEEYKKWKKNTPFLYDLVLTHAVEWPSLTAQWLPDVIRPEGKD 180
Query: 60 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 119
+++H LVLGT+T DEQNHLV+ V +PNDD QFDASH +++KGEFGGF SV GKIE EIK
Sbjct: 181 FSIHQLVLGTYTLDEQNHLVITSVQLPNDDTQFDASHYNTEKGEFGGFYSVRGKIEIEIK 360
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
INHEGEVN+ RYMPQN II+TKTPSSDVLVFDYTKHP+K DPSGEC+PDL LRGHQKEG
Sbjct: 361 INHEGEVNKVRYMPQNSCIISTKTPSSDVLVFDYTKHPSKQDPSGECDPDLCLRGHQKEG 540
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
YGLSWN NL GHLLSA T W H+AVV DV+WHLLHE
Sbjct: 541 YGLSWNPNLCGHLLSAQMT-TPAAW--------------------HTAVV-DVSWHLLHE 654
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCL---SFNPYSEFILATGSADKT 296
SLFGSVA DQKLMIW T S++ SKPSH VDAHTAEV F EFILATGSADKT
Sbjct: 655 SLFGSVAGDQKLMIWGTCSHSASKPSHSVDAHTAEVTLTLLPLFQSLYEFILATGSADKT 834
Query: 297 VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 356
VAL DLRNLKLKLH+FE HKD+IFQ WSPHNETILASSGT+ RLNVWDLSKIGE+QS E
Sbjct: 835 VALRDLRNLKLKLHSFELHKDKIFQFQWSPHNETILASSGTNHRLNVWDLSKIGEKQSPE 1014
Query: 357 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVT 416
D EDGPPELLFIHGGHTAKI DFSWNPNEPWVICSV EDNIMQ+WQMAENIYNDE + +
Sbjct: 1015DKEDGPPELLFIHGGHTAKIPDFSWNPNEPWVICSVPEDNIMQVWQMAENIYNDEYPEGS 1194
Query: 417 ASELEGQGS 425
+ EGQ S
Sbjct: 1195V-DPEGQES 1218
>ref|XM_063256.2| Homo sapiens similar to retinoblastoma binding protein 4
(LOC122670), mRNA
Length = 1281
Score = 604 bits (1558), Expect = e-171
Identities = 301/382 (78%), Positives = 328/382 (85%)
Frame = +1
Query: 44 LTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGE 103
LTVQWLP+ +PEGKD+++H LVLGTHT DEQNHLV+A V + + KGE
Sbjct: 46 LTVQWLPDEIRPEGKDFSIHRLVLGTHTLDEQNHLVIASVQPLM--IMLSLTRHTTTKGE 219
Query: 104 FGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPS 163
FGGFGSV+G IE EIKINHEGEVNRARYMPQN II TKTPSSDVLVFDYTK+P+KPDPS
Sbjct: 220 FGGFGSVSGNIEIEIKINHEGEVNRARYMPQNSCIIKTKTPSSDVLVFDYTKYPSKPDPS 399
Query: 164 GECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFT 223
GECNPDLRL GHQKEGYGLSWN NLSGHLLSASDDHTVCLWDI+A PKEGK VDA+ IFT
Sbjct: 400 GECNPDLRLCGHQKEGYGLSWNPNLSGHLLSASDDHTVCLWDISAIPKEGK-VDARTIFT 576
Query: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPY 283
GH+AVVEDV W+LLHESLF VADDQKLMIWDTRS TSKPSH VDA+TAEVNCLSFNPY
Sbjct: 577 GHTAVVEDVFWNLLHESLFRLVADDQKLMIWDTRSKNTSKPSHSVDAYTAEVNCLSFNPY 756
Query: 284 SEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
EFILATGSADKTVALWDLRNLKLK+H+FESHKDEIFQV WSPHNETILASSGTD LNV
Sbjct: 757 GEFILATGSADKTVALWDLRNLKLKVHSFESHKDEIFQVQWSPHNETILASSGTDHGLNV 936
Query: 344 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
WDLSKI EEQS EDAED PPE LFIHGGHTAKI DFS NP+EPW+ICSVSE+NIM++WQM
Sbjct: 937 WDLSKITEEQSPEDAEDRPPE-LFIHGGHTAKIPDFSLNPSEPWMICSVSENNIMEVWQM 1113
Query: 404 AENIYNDEESDVTASELEGQGS 425
AENI N E+ + + + EGQ S
Sbjct: 1114AENISNGEDPEGSV-DPEGQES 1176
>ref|NM_125208.1| WD-40 repeat protein MSI1 (sp|O22467); also highly similar to G1/S
transition control protein-binding protein RbAp46
Length = 1538
Score = 580 bits (1496), Expect = e-164
Identities = 273/410 (66%), Positives = 329/410 (79%), Gaps = 1/410 (0%)
Frame = +1
Query: 4 KEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALH 63
+E +EER+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++
Sbjct: 88 EEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQ 267
Query: 64 WLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINH 122
++LGTHTS+ E N+L++A+V +P DD + +A D D+ EFGGFG TGK++ +INH
Sbjct: 268 KMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQQINH 447
Query: 123 EGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGL 182
+GEVNRARYMPQNP IIATKT +++V VFDY+KHP+KP G CNPDL+LRGH EGYGL
Sbjct: 448 DGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGL 627
Query: 183 SWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLF 242
SW+ GHLLS SDD +CLWDINA PK K +DA+ IF H VVEDVAWHL HE LF
Sbjct: 628 SWSKFKQGHLLSGSDDAQICLWDINATPKN-KSLDAQQIFKAHEGVVEDVAWHLRHEYLF 804
Query: 243 GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
GSV DDQ L+IWD RS + SKP V AH+ EVNCL+FNP++E+++ATGS DKTV L+DL
Sbjct: 805 GSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDL 984
Query: 303 RNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGP 362
R L LHTF+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGP
Sbjct: 985 RKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGP 1164
Query: 363 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
PELLFIHGGHT+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+
Sbjct: 1165PELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 1314
Score = 52.0 bits (123), Expect = 1e-04
Identities = 37/163 (22%), Positives = 66/163 (39%), Gaps = 12/163 (7%)
Frame = +1
Query: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHTFESHKDE 318
H EVN + P + FI+AT + + V ++D N LKL H E
Sbjct: 445 HDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLR---GHSSE 615
Query: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 378
+ + WS + L S D ++ +WD++ + +S + + I H + D
Sbjct: 616 GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQ--------IFKAHEGVVED 771
Query: 379 FSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELE 421
+W+ ++ SV +D + IW + + V A +E
Sbjct: 772 VAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSME 900
>gb|AF016846.1|AF016846 Arabidopsis thaliana WD-40 repeat protein (MSI1) mRNA, complete cds
Length = 1538
Score = 580 bits (1496), Expect = e-164
Identities = 273/410 (66%), Positives = 329/410 (79%), Gaps = 1/410 (0%)
Frame = +1
Query: 4 KEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALH 63
+E +EER+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++
Sbjct: 88 EEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQ 267
Query: 64 WLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINH 122
++LGTHTS+ E N+L++A+V +P DD + +A D D+ EFGGFG TGK++ +INH
Sbjct: 268 KMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQQINH 447
Query: 123 EGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGL 182
+GEVNRARYMPQNP IIATKT +++V VFDY+KHP+KP G CNPDL+LRGH EGYGL
Sbjct: 448 DGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGL 627
Query: 183 SWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLF 242
SW+ GHLLS SDD +CLWDINA PK K +DA+ IF H VVEDVAWHL HE LF
Sbjct: 628 SWSKFKQGHLLSGSDDAQICLWDINATPKN-KSLDAQQIFKAHEGVVEDVAWHLRHEYLF 804
Query: 243 GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
GSV DDQ L+IWD RS + SKP V AH+ EVNCL+FNP++E+++ATGS DKTV L+DL
Sbjct: 805 GSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDL 984
Query: 303 RNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGP 362
R L LHTF+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGP
Sbjct: 985 RKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGP 1164
Query: 363 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
PELLFIHGGHT+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+
Sbjct: 1165PELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 1314
Score = 52.0 bits (123), Expect = 1e-04
Identities = 37/163 (22%), Positives = 66/163 (39%), Gaps = 12/163 (7%)
Frame = +1
Query: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHTFESHKDE 318
H EVN + P + FI+AT + + V ++D N LKL H E
Sbjct: 445 HDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLR---GHSSE 615
Query: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 378
+ + WS + L S D ++ +WD++ + +S + + I H + D
Sbjct: 616 GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQ--------IFKAHEGVVED 771
Query: 379 FSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELE 421
+W+ ++ SV +D + IW + + V A +E
Sbjct: 772 VAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSME 900
>gb|AY059874.1| Arabidopsis thaliana WD-40 repeat protein MSI1 (At5g58230; MCK7.10)
mRNA, complete cds
Length = 1607
Score = 580 bits (1496), Expect = e-164
Identities = 273/410 (66%), Positives = 329/410 (79%), Gaps = 1/410 (0%)
Frame = +3
Query: 4 KEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALH 63
+E +EER+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++
Sbjct: 93 EEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQ 272
Query: 64 WLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINH 122
++LGTHTS+ E N+L++A+V +P DD + +A D D+ EFGGFG TGK++ +INH
Sbjct: 273 KMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQQINH 452
Query: 123 EGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGL 182
+GEVNRARYMPQNP IIATKT +++V VFDY+KHP+KP G CNPDL+LRGH EGYGL
Sbjct: 453 DGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGL 632
Query: 183 SWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLF 242
SW+ GHLLS SDD +CLWDINA PK K +DA+ IF H VVEDVAWHL HE LF
Sbjct: 633 SWSKFKQGHLLSGSDDAQICLWDINATPKN-KSLDAQQIFKAHEGVVEDVAWHLRHEYLF 809
Query: 243 GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
GSV DDQ L+IWD RS + SKP V AH+ EVNCL+FNP++E+++ATGS DKTV L+DL
Sbjct: 810 GSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDL 989
Query: 303 RNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGP 362
R L LHTF+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGP
Sbjct: 990 RKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGP 1169
Query: 363 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
PELLFIHGGHT+KISDFSWNP E WVI SV+EDNI+QIWQMAENIY+DE+
Sbjct: 1170PELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDED 1319
Score = 52.0 bits (123), Expect = 1e-04
Identities = 37/163 (22%), Positives = 66/163 (39%), Gaps = 12/163 (7%)
Frame = +3
Query: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHTFESHKDE 318
H EVN + P + FI+AT + + V ++D N LKL H E
Sbjct: 450 HDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLR---GHSSE 620
Query: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 378
+ + WS + L S D ++ +WD++ + +S + + I H + D
Sbjct: 621 GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQ--------IFKAHEGVVED 776
Query: 379 FSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELE 421
+W+ ++ SV +D + IW + + V A +E
Sbjct: 777 VAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSME 905
>gb|AF016845.1|AF016845 Lycopersicon esculentum WD-40 repeat protein (LeMSI1) mRNA,
complete cds
Length = 1716
Score = 571 bits (1472), Expect = e-161
Identities = 267/403 (66%), Positives = 324/403 (80%), Gaps = 1/403 (0%)
Frame = +1
Query: 11 VEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTH 70
+EER+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTH
Sbjct: 178 IEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQKMILGTH 357
Query: 71 TSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRA 129
TS+ E N+L++A+V +P +DA+ DA H D D+ EFGGFG GK++ +INH+GEVNRA
Sbjct: 358 TSENEPNYLMLAQVQLPLEDAENDARHYDDDRSEFGGFGCANGKVQIIQQINHDGEVNRA 537
Query: 130 RYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLS 189
RYMPQNP IIATKT S++V VFDY+KHP+KP G CNPDLRLRGH EGYGLSW+
Sbjct: 538 RYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTEGYGLSWSQFKQ 717
Query: 190 GHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQ 249
GHLLS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ
Sbjct: 718 GHLLSGSDDSHICLWDINATPKN-KALEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 894
Query: 250 KLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL 309
L +WD R+ + +KP V AH +EVNCL+FNP++E+++ATGS DKTV L+DLR + L
Sbjct: 895 YLHVWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKISTAL 1074
Query: 310 HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIH 369
HT + HK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIH
Sbjct: 1075HTLDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIH 1254
Query: 370 GGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
GGHT+KISDFSWNP E WV+ SV+EDNI+QIWQMAENIY+DE+
Sbjct: 1255GGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDED 1383
>gb|AF440219.1|AF440219 Zea mays cultivar B73 MSI type nucleosome/chromatin assembly factor
C (nfc103) mRNA, complete cds
Length = 1595
Score = 569 bits (1467), Expect = e-160
Identities = 268/412 (65%), Positives = 325/412 (78%), Gaps = 1/412 (0%)
Frame = +1
Query: 2 ASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYA 61
A +E F VEER+INEEYKIWKKNTPFLYDLV+THAL+WPSLTVQWLP+ T+P GKD++
Sbjct: 79 ADEEEFRAEVEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPDRTEPPGKDHS 258
Query: 62 LHWLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI 120
+ ++LGTHTSD E N+L++A+V +P DDA+ DA H D D + GGFG+ +GK++ +I
Sbjct: 259 VQKMILGTHTSDNEPNYLMLAQVQLPLDDAEADARHYDDDHADIGGFGAASGKVQIVQQI 438
Query: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY 180
NH+GEVNRARYMPQN IIATKT S++V VFDY+KHP+KP G CNPDLRL+GH EGY
Sbjct: 439 NHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLKGHNSEGY 618
Query: 181 GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 240
GLSW+ GHLLS SDD +CLWDI A + K +DA IF H VVEDVAWHL HE
Sbjct: 619 GLSWSIFKEGHLLSGSDDAQICLWDIKANSRN-KSLDALQIFKHHDGVVEDVAWHLRHEY 795
Query: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
LFGSV DD L+IWD RS +KP V AH EVNCL+FNP++E+++ATGS DKTV L+
Sbjct: 796 LFGSVGDDYHLLIWDLRSPAPTKPVQSVVAHQGEVNCLAFNPFNEWVVATGSTDKTVKLF 975
Query: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
DLR + LHTF+ HK+E+FQV WSP NET+LAS RRL VWDLS+I +EQ+ EDAED
Sbjct: 976 DLRKIDTSLHTFDCHKEEVFQVGWSPKNETVLASCCLGRRLMVWDLSRIDQEQTPEDAED 1155
Query: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
GPPEL+FIHGGHT+KISDFSWNP E WV+ SV+EDNI+QIWQMAENIY+DE+
Sbjct: 1156GPPELMFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDED 1311
>emb|Z81097.1|CEK07A1 Caenorhabditis elegans cosmid K07A1, complete sequence
Length = 39086
Score = 302 bits (774), Expect(2) = e-160
Identities = 138/172 (80%), Positives = 157/172 (91%)
Frame = -3
Query: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT 311
+IWD R TS P H +DAH+AEVNCL+FNPYSEFILATGSADKTVALWDLRNL++KLH+
Sbjct: 38331 LIWDVR---TSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHS 38161
Query: 312 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGG 371
FESH+DEIFQV WSPHNETILASSGTD+RL+VWDLSKIGE+QSAEDAEDGPPELLFIHGG
Sbjct: 38160 FESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGG 37981
Query: 372 HTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELEGQ 423
HTAKISDFSWNPNEPWV+CSVSEDNI+Q+WQMA+NIYN+ + + A +E Q
Sbjct: 37980 HTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPADVVERQ 37825
Score = 294 bits (752), Expect(2) = 9e-95
Identities = 154/321 (47%), Positives = 205/321 (62%), Gaps = 36/321 (11%)
Frame = -3
Query: 54 KPEGKDYALHWLVLGTHT-SDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTG 112
K E D ++H ++ GTHT QNHL++++ I D +FD + DS++ EFGG+G +
Sbjct: 37329 KTENSDSSMHRMIHGTHTCGGVQNHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSA 37150
Query: 113 -KIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLR 171
K + EIKINH GEV+RARYMP NP IIA++ PS DV +FDYTKHP++P + + P LR
Sbjct: 37149 AKWDTEIKINHPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPKDT-KFRPQLR 36973
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTV--------------CLWDINAGPKEGKIVD 217
L+GH+ EGYG+SW++ GHLL+A DD V C WDINA +
Sbjct: 36972 LKGHEGEGYGMSWSNTREGHLLTAGDDGMVFLTKDIHKYTFFKICHWDINANQTISGQIV 36793
Query: 218 AKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL--------------------MIWDTR 257
++ F GHS+ EDV++H LH +FGSV DD+KL +WD R
Sbjct: 36792 PQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKL*V*IHHTILSRFQNNFHVFRNLWDLR 36613
Query: 258 SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKD 317
SKP HTAEVNC++FNP+SE+ILATGS DKTVALWD+RN++ K++T + H D
Sbjct: 36612 Q---SKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKHHND 36442
Query: 318 EIFQVHWSPHNETILASSGTD 338
EIFQV +SPH ET+LASSG+D
Sbjct: 36441 EIFQVSFSPHYETVLASSGSD 36379
Score = 290 bits (741), Expect(2) = e-160
Identities = 138/237 (58%), Positives = 173/237 (72%), Gaps = 17/237 (7%)
Frame = -1
Query: 32 DLVMTHALQWPSLTVQWLPEVTKP-----------------EGKDYALHWLVLGTHTSDE 74
DLVMTHAL+WPSL+VQWLP+V K + D+ +H L+LGTHTSDE
Sbjct: 39086 DLVMTHALEWPSLSVQWLPDVAKVCVLI*FTTFMK*IQII*DNSDHTIHRLILGTHTSDE 38907
Query: 75 QNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQ 134
QNHL+++++ +P DDAQFDAS D+++ E+GGFG+V GK+E +I+INHEGEVNRARYMPQ
Sbjct: 38906 QNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVNRARYMPQ 38727
Query: 135 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLS 194
+IIATK+P +DV +FDY KH A P NP +RL+GH KEGYGLSWN N G +LS
Sbjct: 38726 KSNIIATKSPHADVYIFDYLKHSAVP-RDNTFNPLIRLKGHTKEGYGLSWNPNKEGLILS 38550
Query: 195 ASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
ASDD TVC WDINA + AK +F GH +VVEDVAWH+LH+ +FGSV DD+KL
Sbjct: 38549 ASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKL 38379
Score = 79.3 bits (194), Expect(2) = 9e-95
Identities = 34/62 (54%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = -1
Query: 340 RLNVWDLSKIGE--EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
R+ VWD+SKI + SA ++ PPE++FIH GHT K++DFSWNPN PW ICS E N
Sbjct: 36317 RVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNA 36138
Query: 398 MQ 399
+Q
Sbjct: 36137 LQ 36132
Score = 63.9 bits (154), Expect = 3e-08
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Frame = -1
Query: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPE-GK- 58
M+ E E+T ++E++IWKKN P+LYD V+T ++WPSL+VQW+P+VTK GK
Sbjct: 37517 MSEAESCEET------SKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKVRIGKY 37356
Query: 59 DYALHWLVLGTHT 71
D+A + L T
Sbjct: 37355 DFAFFIIFLRQRT 37317
Score = 46.6 bits (109), Expect = 0.004
Identities = 35/160 (21%), Positives = 64/160 (39%), Gaps = 7/160 (4%)
Frame = -3
Query: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 181
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 38283 HSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHS---------FESHRDEIFQ 38131
Query: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 234
+ W+ + L S+ D + +WD++ ++ DA+ I GH+A + D +W
Sbjct: 38130 VQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSW 37951
Query: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE 274
+ + SV++D L +W N ++ A E
Sbjct: 37950 NPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPADVVE 37831
Score = 44.3 bits (103), Expect = 0.022
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Frame = -1
Query: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR--------NLKLKLHTFESHKDEIFQV 322
H EVN + P I+AT S V ++D N L + H E + +
Sbjct: 38765 HEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGL 38586
Query: 323 HWSPHNETILASSGTDRRLNVWDLS---KIGEEQSAEDAEDGPPELLFIHGGHTAKISDF 379
W+P+ E ++ S+ D+ + WD++ + E A+D + GH + + D
Sbjct: 38585 SWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKD----------VFKGHESVVEDV 38436
Query: 380 SWNPNEPWVICSVSED 395
+W+ V SV +D
Sbjct: 38435 AWHVLHDGVFGSVGDD 38388
Score = 42.7 bits (99), Expect = 0.063
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = -1
Query: 259 NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLH---TF 312
+ T P + HT E LS+NP E ++ + S D+TV WD+ +N+ +L F
Sbjct: 38645 DNTFNPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVF 38466
Query: 313 ESHKDEIFQVHWSPHNETILASSGTDRRL 341
+ H+ + V W ++ + S G D++L
Sbjct: 38465 KGHESVVEDVAWHVLHDGVFGSVGDDKKL 38379
Score = 38.5 bits (88), Expect = 1.2
Identities = 24/93 (25%), Positives = 44/93 (46%)
Frame = -1
Query: 314 SHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT 373
+H+ E+ + + P I+A+ + ++D K SA ++ L+ + G HT
Sbjct: 38768 NHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLK----HSAVPRDNTFNPLIRLKG-HT 38604
Query: 374 AKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 406
+ SWNPN+ +I S S+D + W + N
Sbjct: 38603 KEGYGLSWNPNKEGLILSASDDQTVCHWDINAN 38505
>emb|AL512427.10|AL512427 Human DNA sequence from clone RP11-325M4 on chromosome 6, complete
sequence [Homo sapiens]
Length = 201657
Score = 560 bits (1442), Expect = e-157
Identities = 288/444 (64%), Positives = 331/444 (73%), Gaps = 19/444 (4%)
Frame = +3
Query: 1 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
MA KE F+DTVEERVINEEYK WKKNTPFLYDLV+THA++WPSLT QWLP+V +PEGKD
Sbjct: 55878 MADKEAAFDDTVEERVINEEYKKWKKNTPFLYDLVLTHAVEWPSLTAQWLPDVIRPEGKD 56057
Query: 60 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 119
+++H LVLGT+T DEQNHLV+ V +PNDD QFDASH +++KGEFGGF SV GKIE EIK
Sbjct: 56058 FSIHQLVLGTYTLDEQNHLVITSVQLPNDDTQFDASHYNTEKGEFGGFYSVRGKIEIEIK 56237
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
INHEGEVN+ RYMPQN II+TKTPSSDVLVFDYTKHP+K DPSGEC+PDL LRGHQKEG
Sbjct: 56238 INHEGEVNKVRYMPQNSCIISTKTPSSDVLVFDYTKHPSKQDPSGECDPDLCLRGHQKEG 56417
Query: 180 YGLSWNSNLSGHLLSAS-DDHTVCLWDINAGPKEG-----------------KIVDAKAI 221
YGLSWN NL GHLLSA C + +E + + ++
Sbjct: 56418 YGLSWNPNLCGHLLSAQMTTPAACGTSVLFQRREKWWM*RPCLQGIQQ**MFPGICSMSL 56597
Query: 222 FTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFN 281
G V+ ++ + +L ++ + A L + RS+ CLSFN
Sbjct: 56598 CLGQLLVIRNL*FGVLVHTVLPNQAIQLTLTLLK*RSHC----------------CLSFN 56729
Query: 282 PYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
PYSEFILATGSADKTVAL DLRNLKLKLH+FE HKD+IFQ WSPHNETILASSGT+ RL
Sbjct: 56730 PYSEFILATGSADKTVALRDLRNLKLKLHSFELHKDKIFQFQWSPHNETILASSGTNHRL 56909
Query: 342 NVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
NVWDLSKIGE+QS ED EDGPPELLFIHGGHTAKI DFSWNPNEPWVICSV EDNIMQ+W
Sbjct: 56910 NVWDLSKIGEKQSPEDKEDGPPELLFIHGGHTAKIPDFSWNPNEPWVICSVPEDNIMQVW 57089
Query: 402 QMAENIYNDEESDVTASELEGQGS 425
QMAENIYNDE + + + EGQ S
Sbjct: 57090 QMAENIYNDEYPEGSV-DPEGQES 57158
>ref|XM_069195.1| Homo sapiens similar to Chromatin assembly factor 1 subunit;
Nucleosome remodeling factor; Nucleosome remodeling
factor - 55kD (LOC135129), mRNA
Length = 1191
Score = 515 bits (1327), Expect = e-144
Identities = 275/429 (64%), Positives = 314/429 (73%), Gaps = 4/429 (0%)
Frame = +1
Query: 1 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
MA KE F+D VEERVINEEYK WKKNTPFLYDLV+THAL+WPSLT QWLP+VT+PEGKD
Sbjct: 1 MADKEAAFDDAVEERVINEEYKKWKKNTPFLYDLVLTHALEWPSLTAQWLPDVTRPEGKD 180
Query: 60 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 119
+++H LVLGT T DEQNHLV+A V +PNDD QFDASH +++KGEFGGF SV GKIE EI
Sbjct: 181 FSIHQLVLGTCTLDEQNHLVIASVQLPNDDTQFDASHYNTEKGEFGGFYSVRGKIEIEIN 360
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
INHEGEVN+ I+ + V V D+R + G
Sbjct: 361 INHEGEVNK---------ILLESAIQTCVSV------------------DIRRKAMGFLG 459
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
+S + L + + + T L + K+VD K IFTGH+AVVEDV+WHLLHE
Sbjct: 460 TQISVGTYLVLQMTTPAACGTAVL-----SQRREKVVDVKIIFTGHTAVVEDVSWHLLHE 624
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLS---FNPYSEFILATGSADKT 296
SLFGSVADDQKLMIWDT SN+ SKPSH VDAHTAEV F EFILATGSADKT
Sbjct: 625 SLFGSVADDQKLMIWDTCSNSASKPSHSVDAHTAEVTLTLLPLFQSLYEFILATGSADKT 804
Query: 297 VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 356
VAL DLRNLKLKLH+FE KD+IFQV WSPHNETILASSGT+ RLNVWDLSKIGE+QS E
Sbjct: 805 VALRDLRNLKLKLHSFELLKDKIFQVQWSPHNETILASSGTNHRLNVWDLSKIGEKQSPE 984
Query: 357 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVT 416
D +D PPELLFIHGGHTAKI DFS NPNEPWVICSV EDNIMQ+WQMAENIYN+E+ + +
Sbjct: 985 DKKDRPPELLFIHGGHTAKIPDFSGNPNEPWVICSVPEDNIMQVWQMAENIYNNEDPEGS 1164
Query: 417 ASELEGQGS 425
+ EGQ S
Sbjct: 1165V-DPEGQES 1188
>ref|XM_069182.1| Homo sapiens similar to retinoblastoma A associated protein; RbAp48
(H. sapiens) (LOC135106), mRNA
Length = 1191
Score = 515 bits (1327), Expect = e-144
Identities = 275/429 (64%), Positives = 314/429 (73%), Gaps = 4/429 (0%)
Frame = +1
Query: 1 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
MA KE F+D VEERVINEEYK WKKNTPFLYDLV+THAL+WPSLT QWLP+VT+PEGKD
Sbjct: 1 MADKEAAFDDAVEERVINEEYKKWKKNTPFLYDLVLTHALEWPSLTAQWLPDVTRPEGKD 180
Query: 60 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 119
+++H LVLGT T DEQNHLV+A V +PNDD QFDASH +++KGEFGGF SV GKIE EI
Sbjct: 181 FSIHQLVLGTCTLDEQNHLVIASVQLPNDDTQFDASHYNTEKGEFGGFYSVRGKIEIEIN 360
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
INHEGEVN+ I+ + V V D+R + G
Sbjct: 361 INHEGEVNK---------ILLESAIQTCVSV------------------DIRRKAMGFLG 459
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
+S + L + + + T L + K+VD K IFTGH+AVVEDV+WHLLHE
Sbjct: 460 TQISVGTYLVLQMTTPAACGTAVL-----SQRREKVVDVKIIFTGHTAVVEDVSWHLLHE 624
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLS---FNPYSEFILATGSADKT 296
SLFGSVADDQKLMIWDT SN+ SKPSH VDAHTAEV F EFILATGSADKT
Sbjct: 625 SLFGSVADDQKLMIWDTCSNSASKPSHSVDAHTAEVTLTLLPLFQSLYEFILATGSADKT 804
Query: 297 VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 356
VAL DLRNLKLKLH+FE KD+IFQV WSPHNETILASSGT+ RLNVWDLSKIGE+QS E
Sbjct: 805 VALRDLRNLKLKLHSFELLKDKIFQVQWSPHNETILASSGTNHRLNVWDLSKIGEKQSPE 984
Query: 357 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVT 416
D +D PPELLFIHGGHTAKI DFS NPNEPWVICSV EDNIMQ+WQMAENIYN+E+ + +
Sbjct: 985 DKKDRPPELLFIHGGHTAKIPDFSGNPNEPWVICSVPEDNIMQVWQMAENIYNNEDPEGS 1164
Query: 417 ASELEGQGS 425
+ EGQ S
Sbjct: 1165V-DPEGQES 1188
>ref|NM_060150.1| retinablastoma-binding protein RBAP46 like
Length = 1239
Score = 456 bits (1174), Expect = e-126
Identities = 215/416 (51%), Positives = 298/416 (70%), Gaps = 4/416 (0%)
Frame = +1
Query: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY 60
M+ E E+T ++E++IWKKN P+LYD V+T ++WPSL+VQW+P+VTK E D
Sbjct: 1 MSEAESCEET------SKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDS 162
Query: 61 ALHWLVLGTHT-SDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTG-KIECEI 118
++H ++ GTHT QNHL++++ I D +FD + DS++ EFGG+G + K + EI
Sbjct: 163 SMHRMIHGTHTCGGVQNHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSAAKWDTEI 342
Query: 119 KINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKE 178
KINH GEV+RARYMP NP IIA++ PS DV +FDYTKHP++P + + P LRL+GH+ E
Sbjct: 343 KINHPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPKDT-KFRPQLRLKGHEGE 519
Query: 179 GYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLH 238
GYG+SW++ GHLL+A DD +C WDINA + ++ F GHS+ EDV++H LH
Sbjct: 520 GYGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALH 699
Query: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
+FGSV DD+KL +WD R SKP HTAEVNC++FNP+SE+ILATGS DKTVA
Sbjct: 700 NFVFGSVGDDRKLNLWDLRQ---SKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVA 870
Query: 299 LWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE--EQSAE 356
LWD+RN++ K++T + H DEIFQV +SPH ET+LASSG+D R+ VWD+SKI + SA
Sbjct: 871 LWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSSSSAA 1050
Query: 357 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
++ PPE++FIH GHT K++DFSWNPN PW ICS E N +Q+W+++ ++ + E+
Sbjct: 1051SSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNALQVWEVSNSLVSSEK 1218
Score = 43.1 bits (100), Expect = 0.048
Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 13/163 (7%)
Frame = +1
Query: 165 ECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTG 224
+ P L GH E +++N L + S D TV LWD+ K K+ K
Sbjct: 757 QSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRK--KMYTLKH---- 918
Query: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIWD----------TRSNTTSKPSHLV---DAH 271
H+ + V++ +E++ S D ++++WD + +++ S P ++ H
Sbjct: 919 HNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGH 1098
Query: 272 TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFES 314
T +V S+NP + + + + +W++ N + +E+
Sbjct: 1099TGKVADFSWNPNRPWTICSSDEFNALQVWEVSNSLVSSEKWET 1227
>gb|AF297468.1|AF297468 Schistosoma mansoni strain NMRI chromatin assembly factor 1 small
subunit-like protein (RBAP48) mRNA, complete cds
Length = 1036
Score = 449 bits (1155), Expect = e-124
Identities = 204/295 (69%), Positives = 246/295 (83%)
Frame = +2
Query: 8 EDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVL 67
ED VEERVINEEYKIWK+NTPFLYD++M+H L+WPSLT QWLP V + G+DY++H L+L
Sbjct: 110 EDIVEERVINEEYKIWKRNTPFLYDMLMSHCLEWPSLTAQWLPSVERT-GRDYSVHRLIL 286
Query: 68 GTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVN 127
GTHTSDEQNHL++ VH+PND A+FDAS DS++G+FGGF +GK+E +KINHEGEVN
Sbjct: 287 GTHTSDEQNHLLIVTVHLPNDQAEFDASAYDSERGDFGGFYFPSGKLEISMKINHEGEVN 466
Query: 128 RARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSN 187
RAR+MPQNP IIATKTPS DVL+F+Y +HP K C PDLRL+GHQKEGYGLSWN +
Sbjct: 467 RARFMPQNPDIIATKTPSGDVLIFNYPRHPPKTPSDRGCQPDLRLKGHQKEGYGLSWNVS 646
Query: 188 LSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVAD 247
L+GHLLSASDD T+CLWD+NA P +G +DA AIFTGH +VVEDV+WHL H +FGSVAD
Sbjct: 647 LNGHLLSASDDQTICLWDVNAAPLDGCDLDAMAIFTGHHSVVEDVSWHLFHGHIFGSVAD 826
Query: 248 DQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
D KLM+WDTRS+ +KP H VDAHTAEVNCL+FNP+SEFI+ATGSADK + + L
Sbjct: 827 DNKLMVWDTRSSNRTKPQHQVDAHTAEVNCLAFNPFSEFIIATGSADKVIKYFTL 991
Score = 50.1 bits (118), Expect = 4e-04
Identities = 36/159 (22%), Positives = 63/159 (38%), Gaps = 6/159 (3%)
Frame = +2
Query: 256 TRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------L 309
T S+ +P + H E LS+N L + S D+T+ LWD+ L +
Sbjct: 563 TPSDRGCQPDLRLKGHQKEGYGLSWNVSLNGHLLSASDDQTICLWDVNAAPLDGCDLDAM 742
Query: 310 HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIH 369
F H + V W + I S D +L VWD + +
Sbjct: 743 AIFTGHHSVVEDVSWHLFHGHIFGSVADDNKLMVWDTRSSNRTKPQHQVD---------- 892
Query: 370 GGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 408
HTA+++ ++NP ++I + S D +++ + + Y
Sbjct: 893 -AHTAEVNCLAFNPFSEFIIATGSADKVIKYFTLVSFFY 1006
Score = 43.5 bits (101), Expect = 0.037
Identities = 35/160 (21%), Positives = 65/160 (39%), Gaps = 9/160 (5%)
Frame = +2
Query: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT---------FESHKDEIFQ 321
H EVN F P + I+AT + V +++ K + + H+ E +
Sbjct: 449 HEGEVNRARFMPQNPDIIATKTPSGDVLIFNYPRHPPKTPSDRGCQPDLRLKGHQKEGYG 628
Query: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
+ W+ L S+ D+ + +WD++ + DA + I GH + + D SW
Sbjct: 629 LSWNVSLNGHLLSASDDQTICLWDVNAAPLDGCDLDA-------MAIFTGHHSVVEDVSW 787
Query: 382 NPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELE 421
+ + SV++DN + +W + + V A E
Sbjct: 788 HLFHGHIFGSVADDNKLMVWDTRSSNRTKPQHQVDAHTAE 907
>ref|NM_127230.1| putative WD-40 repeat protein, MSI2
Length = 1427
Score = 439 bits (1130), Expect = e-121
Identities = 217/419 (51%), Positives = 288/419 (67%), Gaps = 9/419 (2%)
Frame = +3
Query: 3 SKEMFEDTVEERV----INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGK 58
++E+ D +E + E++ +WKKNTPFLYDL+++H L+WPSLTV W+P P
Sbjct: 18 AREIMADEGKEETGMGQVEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVA 197
Query: 59 D--YALHWLVLGTHTSDE-QNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIE 115
D + +H L+LGTHTS Q+ L+VA V P +A+ + D K+E
Sbjct: 198 DSYFGVHKLILGTHTSGSAQDFLMVADVVTPTPNAEPGIGGANQDP--------FIPKVE 353
Query: 116 CEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGH 175
+I +GEVNRAR MPQ P ++ KT +V +FDY KH AK S EC+PDLRL GH
Sbjct: 354 IRQRIRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTS-ECDPDLRLVGH 530
Query: 176 QKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWH 235
KEGYGLSW+ G+LLS S D +CLWD++A P++ K+++A ++ GH + + DV+WH
Sbjct: 531 DKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQD-KVLNAMFVYEGHESAIADVSWH 707
Query: 236 LLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADK 295
+ +E+LFGS +D +L+IWDTR+N + H V H EVN LSFNP++E++LAT S+D
Sbjct: 708 MKNENLFGSAGEDGRLVIWDTRTN---QMQHQVKVHEREVNYLSFNPFNEWVLATASSDS 878
Query: 296 TVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ-- 353
TVAL+DLR L LH SH+ E+FQV W P++ET+LASSG DRRL VWDL+++GEEQ
Sbjct: 879 TVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLE 1058
Query: 354 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
DAEDGPPELLF HGGH AKISDF+WN NEPWVI SV+EDN +Q+WQMAE+IY DEE
Sbjct: 1059IELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAESIYRDEE 1235
>gb|AY056814.1| Arabidopsis thaliana At2g16780/T24I21.19 mRNA, complete cds
Length = 1463
Score = 439 bits (1130), Expect = e-121
Identities = 217/419 (51%), Positives = 288/419 (67%), Gaps = 9/419 (2%)
Frame = +3
Query: 3 SKEMFEDTVEERV----INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGK 58
++E+ D +E + E++ +WKKNTPFLYDL+++H L+WPSLTV W+P P
Sbjct: 39 AREIMADEGKEETGMGQVEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVA 218
Query: 59 D--YALHWLVLGTHTSDE-QNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIE 115
D + +H L+LGTHTS Q+ L+VA V P +A+ + D K+E
Sbjct: 219 DSYFGVHKLILGTHTSGSAQDFLMVADVVTPTPNAEPGIGGANQDP--------FIPKVE 374
Query: 116 CEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGH 175
+I +GEVNRAR MPQ P ++ KT +V +FDY KH AK S EC+PDLRL GH
Sbjct: 375 IRQRIRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTS-ECDPDLRLVGH 551
Query: 176 QKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWH 235
KEGYGLSW+ G+LLS S D +CLWD++A P++ K+++A ++ GH + + DV+WH
Sbjct: 552 DKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQD-KVLNAMFVYEGHESAIADVSWH 728
Query: 236 LLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADK 295
+ +E+LFGS +D +L+IWDTR+N + H V H EVN LSFNP++E++LAT S+D
Sbjct: 729 MKNENLFGSAGEDGRLVIWDTRTN---QMQHQVKVHEREVNYLSFNPFNEWVLATASSDS 899
Query: 296 TVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ-- 353
TVAL+DLR L LH SH+ E+FQV W P++ET+LASSG DRRL VWDL+++GEEQ
Sbjct: 900 TVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLE 1079
Query: 354 SAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
DAEDGPPELLF HGGH AKISDF+WN NEPWVI SV+EDN +Q+WQMAE+IY DEE
Sbjct: 1080IELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAESIYRDEE 1256
>gb|AF016847.1|AF016847 Arabidopsis thaliana WD-40 repeat protein (MSI2) mRNA, complete cds
Length = 1425
Score = 439 bits (1129), Expect = e-121
Identities = 214/402 (53%), Positives = 281/402 (69%), Gaps = 5/402 (1%)
Frame = +3
Query: 16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD--YALHWLVLGTHTSD 73
+ E++ +WKKNTPFLYDL+++H L+WPSLTV W+P P D + +H L+LGTHTS
Sbjct: 45 VEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGVHKLILGTHTSG 224
Query: 74 E-QNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Q+ L+VA V P +A+ + D K+E +I +GEVNRAR M
Sbjct: 225 SAQDFLMVADVVTPTPNAEPGIGGANQDP--------FIPKVEIRQRIRVDGEVNRARCM 380
Query: 133 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
PQ P ++ KT +V +FDY KH AK S EC+PDLRL GH KEGYGLSW+ G+L
Sbjct: 381 PQKPTLVGAKTSGCEVFLFDYAKHAAKSQTS-ECDPDLRLVGHDKEGYGLSWSPFKEGYL 557
Query: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
LS S D +CLWD++A P++ K+++A ++ GH + + DV+WH+ +E+LFGS +D +L+
Sbjct: 558 LSGSQDQKICLWDVSATPQD-KVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLV 734
Query: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 312
IWDTR+N + H V H EVN LSFNP++E++LAT S+D TVAL+DLR L LH
Sbjct: 735 IWDTRTN---QMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVM 905
Query: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ--SAEDAEDGPPELLFIHG 370
SH+ E+FQV W P++ET+LASSG DRRL VWDL+++GEEQ DAEDGPPELLF HG
Sbjct: 906 SSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHG 1085
Query: 371 GHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
GH AKISDF+WN NEPWVI SV+EDN +Q+WQMAE+IY DEE
Sbjct: 1086GHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAESIYRDEE 1211
>ref|NM_119671.1| WD-40 repeat protein (MSI3)
Length = 1453
Score = 436 bits (1120), Expect = e-120
Identities = 209/404 (51%), Positives = 286/404 (70%), Gaps = 5/404 (1%)
Frame = +1
Query: 16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD--YALHWLVLGTHTSD 73
+ EE+ IWK+NTPFLYDL+++H L+WPSLT+ W+P P KD +A+H L+LGTHTS
Sbjct: 46 VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHTSG 225
Query: 74 -EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Q+ L+VA V IP DA+ D + + K+E + KI +GEVNRAR M
Sbjct: 226 GAQDFLMVADVVIPTPDAEPGLGGRDQEP--------IVPKVEIKQKIRVDGEVNRARCM 381
Query: 133 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
PQ P ++ KT S+V +FDY + KP S EC+PDLRL GH++EGYGL+W+S G+L
Sbjct: 382 PQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRLMGHEQEGYGLAWSSFKEGYL 558
Query: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
LS S D +CLWD++A + K+++ ++ GH +++EDVAWH+ +E++FGS DD +L+
Sbjct: 559 LSGSQDQRICLWDVSATATD-KVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLV 735
Query: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 312
IWD R+N + H V H E+N LSFNP++E++LAT S+D TVAL+DLR L LH
Sbjct: 736 IWDLRTN---QMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVL 906
Query: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ--SAEDAEDGPPELLFIHG 370
H+ E+FQV W P++ET+LASSG DRRL VWD++++G+EQ DAEDGPPELLF HG
Sbjct: 907 SKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHG 1086
Query: 371 GHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESD 414
GH AKISDF+WN +EPWVI SV+EDN +Q+WQMAE+IY +++ D
Sbjct: 1087GHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDED 1218
>gb|AF016848.1|AF016848 Arabidopsis thaliana WD-40 repeat protein (MSI3) mRNA, complete cds
Length = 1461
Score = 433 bits (1113), Expect = e-119
Identities = 207/404 (51%), Positives = 286/404 (70%), Gaps = 5/404 (1%)
Frame = +1
Query: 16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD--YALHWLVLGTHTSD 73
+ EE+ IWK+NTPFLYDL+++H L+WPSLT+ W+P P KD +A+H L+LGTHTS
Sbjct: 46 VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHTSG 225
Query: 74 -EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Q+ L+VA V IP DA+ D + + K+E + KI +GEVNRAR M
Sbjct: 226 GAQDFLMVADVVIPTPDAEPGLGGRDQEP--------IVPKVEIKQKIRVDGEVNRARCM 381
Query: 133 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
PQ P ++ KT S+V +FDY + KP S EC+PDLRL GH++EGYGL+W+S G+L
Sbjct: 382 PQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRLMGHEQEGYGLAWSSFKEGYL 558
Query: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
LS S D +CLWD++A + K+++ ++ GH +++E++AWH+ +E++FGS DD +L+
Sbjct: 559 LSGSQDQRICLWDVSATATD-KVLNPMHVYEGHQSIIEELAWHMKNENIFGSAGDDCQLV 735
Query: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 312
IWD R+N + H V H E+N LSFNP++E++LAT S+D TVAL+DLR L LH
Sbjct: 736 IWDLRTN---QMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVL 906
Query: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ--SAEDAEDGPPELLFIHG 370
H+ E+FQV W P++ET+LASSG DRRL VWD++++G+EQ DAEDGPPELLF HG
Sbjct: 907 SKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHG 1086
Query: 371 GHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESD 414
GH AKISDF+WN +EPWVI SV+EDN +Q+WQMAE+IY +++ D
Sbjct: 1087GHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDED 1218
>emb|AL031324.2|SPCC1672 S.pombe chromosome III cosmid c1672
Length = 35999
Score = 350 bits (897), Expect(2) = e-108
Identities = 177/369 (47%), Positives = 240/369 (64%), Gaps = 4/369 (1%)
Frame = +1
Query: 57 GKDYALHWLVLGTHTS-DEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIE 115
G DY++ L+LGTHTS ++QN+L +A V +PN D S GS T IE
Sbjct: 26005 GTDYSIQRLILGTHTSGNDQNYLQIASVQLPNFDED-TTEFTPSTIRRAQATGSYT--IE 26175
Query: 116 CEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGH 175
KI H+G+VNRARYMPQ P IIAT + +FD T H A +GE P L+GH
Sbjct: 26176 ISQKIPHDGDVNRARYMPQKPEIIATMGEGGNAYIFDTTCHDALT--TGEALPQAVLKGH 26349
Query: 176 QKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP---KEGKIVDAKAIFTGHSAVVEDV 232
EG+GL WN NL G+L + ++D +CLWD+ E K++ A + H+ +V DV
Sbjct: 26350 TAEGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIVNDV 26529
Query: 233 AWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGS 292
+H HE+L SV+DD L I DTR N + ++ AH+ +N ++ NP+++++LAT S
Sbjct: 26530 QFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLATAS 26709
Query: 293 ADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE 352
ADKTVALWDLRN +LHT E H+DE++ + WSPH+E ILASS TDRR+ +WDL KIGEE
Sbjct: 26710 ADKTVALWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKIGEE 26889
Query: 353 QSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
Q+ EDAEDG PELLF+HGGHT +IS+FSW PNE WV+ S+++DNI+QIW + I+ +
Sbjct: 26890 QTPEDAEDGSPELLFMHGGHTNRISEFSWCPNERWVVGSLADDNILQIWSPSRVIWGRDH 27069
Query: 413 SDVTASELE 421
V+ +LE
Sbjct: 27070 VQVSPRDLE 27096
Score = 69.7 bits (169), Expect(2) = e-108
Identities = 26/37 (70%), Positives = 34/37 (91%)
Frame = +3
Query: 15 VINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPE 51
++ EYK+WK+N PFLYDLV+THAL+WPSLT+QWLP+
Sbjct: 25791 ILVSEYKLWKQNVPFLYDLVITHALEWPSLTIQWLPD 25901
>emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
Length = 226576
Score = 309 bits (791), Expect = 4e-82
Identities = 155/401 (38%), Positives = 232/401 (57%), Gaps = 1/401 (0%)
Frame = -2
Query: 6 MFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWL 65
M +E++++NEEYKIWKKN P+LYDL+ +H L+WPSL+VQW P+V + E L
Sbjct: 96711 MDNQVLEQKIVNEEYKIWKKNVPYLYDLMFSHTLEWPSLSVQWFPDVRRDEEAGRTTQRL 96532
Query: 66 VLGTHTS-DEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEG 124
+L THTS E+ ++++A+V P++ FD S + G+ +++ +I+
Sbjct: 96531 LLSTHTSGSEEEYILIAKVEFPDE---FDESLNEEVGGDM--------RLKIIQRISIMD 96385
Query: 125 EVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSW 184
E NR RY P +++A ++ D+ V+DYTKH + PD+ LRGH G+GLSW
Sbjct: 96384 EANRVRYNPSACNVLAVRSDLPDIHVYDYTKHLSHEKIP---RPDMVLRGHSAGGFGLSW 96214
Query: 185 NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGS 244
N G L + VC++D++ +E + + H V D A+ + L S
Sbjct: 96213 NHLNPGELAGCGEGGEVCVFDVS---QESSSISPTVVLRRHETAVNDCAFSFFDKKLLSS 96043
Query: 245 VADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 304
D +++WDTRS + +AHT+++ + F+P ++AT S D +V +WD R+
Sbjct: 96042 AGDGGMVVLWDTRSEDCIHA--IEEAHTSDILSVRFSPLDGNVIATSSCDGSVKVWDRRS 95869
Query: 305 LKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPE 364
L LH H ++ V WSPHN+ +LAS TDRR+ VWDL + G E E +GPPE
Sbjct: 95868 LSQPLHILLGHSKDVVSVEWSPHNDKVLASGSTDRRVIVWDLGQAGAEVPEEYKAEGPPE 95689
Query: 365 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 405
+ F+HGGHT+ + D SWNP EP+ I SVSEDNI+QIWQM +
Sbjct: 95688 MKFLHGGHTSTVCDISWNPAEPFEIASVSEDNILQIWQMPQ 95566
>dbj|AB019228.1|AB019228 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCK7
Length = 87090
Score = 162 bits (411), Expect(2) = 7e-78
Identities = 108/254 (42%), Positives = 129/254 (50%), Gaps = 57/254 (22%)
Frame = +3
Query: 119 KINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKE 178
+INH+GEVNRARYMPQNP IIATKT +++V VFDY+KHP+KP G CNPDL+LRGH E
Sbjct: 29703 QINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSE 29882
Query: 179 GYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGH------------S 226
GYGLSW+ GHLLS SDD +CLWDINA PK K +DA+ IF S
Sbjct: 29883 GYGLSWSKFKQGHLLSGSDDAQICLWDINATPK-NKSLDAQQIFKVMLWISIRF*FCFVS 30059
Query: 227 AVVEDVA------------------WHL------------LHESLFGSVA---------- 246
+ E +A W L HE + VA
Sbjct: 30060 SRKEGIAPT*RNQLHL*KLIDRYSGWFLCFPC**LFSELKAHEGVVEDVAWHLRHEYLFG 30239
Query: 247 ---DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNC--LSFNPYSEFILATGSADKTVALWD 301
DDQ L+IWD RS + SKP V AH+ EV+ +SF F W
Sbjct: 30240 SVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVSLQYISFRYR*YF-------------WF 30380
Query: 302 LRNLKLKLHTFESH 315
L L L L T ES+
Sbjct: 30381 LSLLSLTLKTIESY 30422
Score = 154 bits (389), Expect(2) = 7e-78
Identities = 69/120 (57%), Positives = 93/120 (77%), Gaps = 1/120 (0%)
Frame = +2
Query: 4 KEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALH 63
+E +EER+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++
Sbjct: 29252 EEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQ 29431
Query: 64 WLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINH 122
++LGTHTS+ E N+L++A+V +P DD + +A D D+ EFGGFG TGK+ I ++H
Sbjct: 29432 KMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVRFFIFVSH 29611
Score = 119 bits (298), Expect(3) = 2e-47
Identities = 53/65 (81%), Positives = 60/65 (91%)
Frame = +1
Query: 348 KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 407
+I EEQ+ EDAEDGPPELLFIHGGHT+KISDFSWNP E WVI SV+EDNI+QIWQMAENI
Sbjct: 30892 RIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 31071
Query: 408 YNDEE 412
Y+DE+
Sbjct: 31072 YHDED 31086
Score = 67.0 bits (162), Expect(3) = 2e-47
Identities = 29/49 (59%), Positives = 40/49 (81%)
Frame = +2
Query: 275 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVH 323
VNCL+FNP++E+++ATGS DKTV L+DLR L LHTF+SHK E + ++
Sbjct: 30470 VNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHK*E*YAIN 30616
Score = 50.1 bits (118), Expect(3) = 2e-47
Identities = 22/35 (62%), Positives = 27/35 (76%)
Frame = +3
Query: 316 KDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
++E+FQV W+P NETILAS RRL VWDLS+ G
Sbjct: 30705 REEVFQVGWNPKNETILASCCLGRRLMVWDLSRFG 30809
Score = 37.0 bits (84), Expect = 3.5
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Frame = +3
Query: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHTFESHKDE 318
H EVN + P + FI+AT + + V ++D N LKL H E
Sbjct: 29712 HDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLR---GHSSE 29882
Query: 319 IFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 356
+ + WS + L S D ++ +WD++ + +S +
Sbjct: 29883 GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLD 29996
>gb|U18795.1|SCE9669 Saccharomyces cerevisiae chromosome V cosmids 9669, 8334, 8199, and
lambda clone 1160
Length = 50849
Score = 276 bits (707), Expect = 2e-72
Identities = 143/395 (36%), Positives = 223/395 (56%), Gaps = 3/395 (0%)
Frame = +3
Query: 16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTS-DE 74
++EEY +WK N P +YD V L WPSLTVQWLP + + L++GTHTS +E
Sbjct: 44718 VDEEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLPTPVQELDGGFIKQELIIGTHTSGEE 44897
Query: 75 QNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQ 134
+N+L A +++P + + ++ + + I K HE E+ RARYMPQ
Sbjct: 44898 ENYLKFAEINLPKEILSNEDPQEEAGEEYQSSLPAPRSNIRITAKYEHEEEITRARYMPQ 45077
Query: 135 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLS 194
+P+I+AT V ++ ++ L+ H+ GY LS+++ + G LLS
Sbjct: 45078 DPNIVATINGQGTVFLYSRSE-----------GLQSTLKFHKDNGYALSFSTLVKGRLLS 45224
Query: 195 ASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIW 254
SDDHTV LW++ +G K V + HS ++ D WH ++ LFG+V++D L I
Sbjct: 45225 GSDDHTVALWEVGSGGDPTKPV--RTWNDLHSDIINDNKWHNFNKDLFGTVSEDSLLKIN 45398
Query: 255 DTRSNTTSKPSHLVDAHTAE--VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 312
D R+N T+ +D N L+F+ +S +LA D V L+DLRN+K LH
Sbjct: 45399 DVRANNTT-----IDTVKCPQPFNTLAFSHHSSNLLAAAGMDSYVYLYDLRNMKEPLHHM 45563
Query: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 372
H+D + + +S H + ++ SSG+D RL +WDL +IG EQ+ +DAEDG PEL+ +H GH
Sbjct: 45564 SGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGVPELIMVHAGH 45743
Query: 373 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 407
+ ++DF NP PW++ S E+NI+Q+W+ + ++
Sbjct: 45744 RSSVNDFDLNPQIPWLVASAEEENILQVWKCSHSL 45848
>emb|Z97210.2|SPAC29A4 S.pombe chromosome I cosmid c29A4
Length = 44082
Score = 247 bits (631), Expect = 1e-63
Identities = 131/302 (43%), Positives = 182/302 (59%), Gaps = 5/302 (1%)
Frame = -3
Query: 121 NHEGEVNRARYMPQNPHIIATK-TPSSDVLVFDYTKHPAKPDPS-GECNPDLRLRGHQKE 178
+H V A+ MPQ+ +AT +DVLVFD + S P RL H +
Sbjct: 8392 SHPESVCSAKLMPQDDSCVATVGNYHNDVLVFDKESFESYSSASESPLKPKYRLTKHTQP 8213
Query: 179 GYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLH 238
+ WN G L+S S D T+ WD+NA + K + H V DV +H H
Sbjct: 8212 CTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFHYKH 8033
Query: 239 ESLFGSVADDQKLMIWDTRS-NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTV 297
+ L SV+ DQ L + D R + ++KP+ V AH+ ++ ++FNP+++FILAT S DKT+
Sbjct: 8032 QDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATCSTDKTI 7853
Query: 298 ALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 357
ALWDLRNL +LHT E H+D + ++ +SPH E ILAS+ DRR VWDLS+IGE+Q AE+
Sbjct: 7852 ALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLSRIGEDQPAEE 7673
Query: 358 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE--ESDV 415
A+DGPPELLF+HGGHT+ D W PN W + + +EDNI+QIW + +I+ +E E D
Sbjct: 7672 AQDGPPELLFMHGGHTSCTIDMDWCPNYNWTMATAAEDNILQIWTPSRSIWGNEQLEEDA 7493
Query: 416 TA 417
TA
Sbjct: 7492 TA 7487
Score = 62.4 bits (150), Expect = 8e-08
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = -1
Query: 19 EYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPE 51
EYKIWKKN+PFLYDL++T AL+WP +++QW PE
Sbjct: 8763 EYKIWKKNSPFLYDLIITRALEWPCMSLQWYPE 8665
>gb|AF384037.1|AF384037 Zea mays nucleosome/chromatin assembly factor C (nfc102) mRNA,
complete cds
Length = 1808
Score = 228 bits (581), Expect = 8e-58
Identities = 159/456 (34%), Positives = 217/456 (46%), Gaps = 39/456 (8%)
Frame = +3
Query: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 64
EM E + ++E Y WK P LYD H L WPSL+ +W P+ K K+ +
Sbjct: 216 EMKERSGSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCRWGPQFEKATYKNRQRLY 395
Query: 65 LVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEG 124
L T S N LV+A + A H E + + ++ I H G
Sbjct: 396 LSEQTDGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKYKTIVHPG 554
Query: 125 EVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSG--ECNPDLRLRGHQKEGYGL 182
EVNR R +PQN IIAT T S DVL++D P + G E PDL L GH++
Sbjct: 555 EVNRIRELPQNSKIIATHTDSPDVLIWDVEAQPNRHAVLGASESRPDLILTGHKENAEFA 734
Query: 183 SWNSNLSGHLLSASDDHTVCLWDIN------------------------AGPKEGKIVDA 218
++LS D +V LW I A KE VD
Sbjct: 735 LAMCPAEPYVLSGGKDKSVVLWSIQDHISALGDSSSSPGASGSKQSIKTANEKESPKVDP 914
Query: 219 KAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVD-AHTAEVNC 277
+ IF GH + VEDV + F SV DD L++WD R+ T P+ V+ AH+ +V+C
Sbjct: 915 RGIFHGHDSTVEDVQFCPSSAQEFCSVGDDACLILWDARTGTA--PAVKVEKAHSGDVHC 1088
Query: 278 LSFNPYSEFILATGSADKTVALWDLRNLKL-----KLHTFESHKDEIFQVHWSPHNETIL 332
+ +NP + TGSAD +V +WD RNL +H FE HK + V WSP ++
Sbjct: 1089VDWNPLDVNYILTGSADNSVRMWDRRNLGSGGAGSPIHKFEGHKAAVLCVQWSPDRASVF 1268
Query: 333 ASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 392
SS D LNVWD K+G+++++ + P L F H GH KI DF WN ++PW I SV
Sbjct: 1269GSSAEDGFLNVWDHEKVGKKKNS----NVPAGLFFQHAGHRDKIVDFHWNSSDPWTIVSV 1436
Query: 393 SED-------NIMQIWQMAENIYNDEESDVTASELE 421
S+D +QIW+M++ IY E D +ELE
Sbjct: 1437SDDGESTGGGGTLQIWRMSDLIYRPE--DEVLAELE 1538
>gb|AF250047.1|AF250047 Zea mays WD-repeat protein RBAP1 (rbap1) mRNA, complete cds
Length = 1777
Score = 227 bits (578), Expect = 2e-57
Identities = 159/456 (34%), Positives = 216/456 (46%), Gaps = 39/456 (8%)
Frame = +1
Query: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 64
EM E ++E Y WK P LYD H L WPSL+ +W P+ K K+ +
Sbjct: 304 EMKERGGSSAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCRWGPQFEKATYKNRQRLY 483
Query: 65 LVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEG 124
L T S N LV+A + A H E + + ++ I H G
Sbjct: 484 LSEQTDGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKYKTIVHPG 642
Query: 125 EVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSG--ECNPDLRLRGHQKEGYGL 182
EVNR R +PQN IIAT T S DVL++D P + G E PDL L GH++
Sbjct: 643 EVNRIRELPQNSKIIATHTDSPDVLIWDVEAQPNRHAVLGASESRPDLILTGHKENAEFA 822
Query: 183 SWNSNLSGHLLSASDDHTVCLWDIN------------------------AGPKEGKIVDA 218
++LS D +V LW I A KE VD
Sbjct: 823 LAMCPAEPYVLSGGKDKSVVLWSIQDHISALGDSSSSPGASGSKQSIKTANEKESPKVDP 1002
Query: 219 KAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVD-AHTAEVNC 277
+ IF GH + VEDV + F SV DD L++WD R+ T P+ V+ AH+ +V+C
Sbjct: 1003RGIFHGHDSTVEDVQFCPSSAQEFCSVGDDACLILWDARTGTA--PAVKVEKAHSGDVHC 1176
Query: 278 LSFNPYSEFILATGSADKTVALWDLRNLKL-----KLHTFESHKDEIFQVHWSPHNETIL 332
+ +NP + TGSAD +V +WD RNL +H FE HK + V WSP ++
Sbjct: 1177VDWNPLDVNYILTGSADNSVRMWDRRNLGSGGAGSPIHKFEGHKAAVLCVQWSPDRASVF 1356
Query: 333 ASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 392
SS D LNVWD K+G+++++ + P L F H GH KI DF WN ++PW I SV
Sbjct: 1357GSSAEDGFLNVWDHEKVGKKKNS----NVPAGLFFQHAGHRDKIVDFHWNSSDPWTIVSV 1524
Query: 393 SED-------NIMQIWQMAENIYNDEESDVTASELE 421
S+D +QIW+M++ IY E D +ELE
Sbjct: 1525SDDGESTGGGGTLQIWRMSDLIYRPE--DEVLAELE 1626
>gb|AY059799.1| Arabidopsis thaliana putative WD-40 repeat protein, MSI4
(At2g19520; F3P11.12) mRNA, complete cds
Length = 1776
Score = 222 bits (566), Expect = 4e-56
Identities = 147/453 (32%), Positives = 213/453 (46%), Gaps = 37/453 (8%)
Frame = +1
Query: 4 KEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALH 63
KE + T + ++E+Y WK P LYD + H L WPSL+ +W P++ + K+
Sbjct: 178 KESGKKTQQSPSVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRL 357
Query: 64 WLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHE 123
+L T S N LV+A + A H E + + ++ I H
Sbjct: 358 YLSEQTDGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKYKTIIHP 516
Query: 124 GEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECN--PDLRLRGHQKEGYG 181
GEVNR R +PQN I+AT T S DVL++D P + G N PDL L GHQ
Sbjct: 517 GEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEF 696
Query: 182 LSWNSNLSGHLLSASDDHTVCLWDIN-----------------------AGPKEGKIVDA 218
+LS D +V LW I E V
Sbjct: 697 ALAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQTGEGTDKNESPTVGP 876
Query: 219 KAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCL 278
+ ++ GH VEDVA+ F SV DD L++WD R+ T + + + AH A+++C+
Sbjct: 877 RGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGT-NPVTKVEKAHDADLHCV 1053
Query: 279 SFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILA 333
+NP+ + ++ TGSAD TV L+D R L ++ FE HK + V WSP ++
Sbjct: 1054DWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFG 1233
Query: 334 SSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
SS D LN+WD ++ ++ ++ A P L F H GH K+ DF WN ++PW I SVS
Sbjct: 1234SSAEDGLLNIWDYDRVSKK--SDRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVS 1407
Query: 394 ED-------NIMQIWQMAENIYNDEESDVTASE 419
+D +QIW+M++ IY EE V E
Sbjct: 1408DDCETTGGGGTLQIWRMSDLIYRPEEEVVAELE 1506
>gb|AY057655.1| Arabidopsis thaliana At2g19520/F3P11.12 mRNA, complete cds
Length = 1810
Score = 222 bits (566), Expect = 4e-56
Identities = 147/453 (32%), Positives = 213/453 (46%), Gaps = 37/453 (8%)
Frame = +1
Query: 4 KEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALH 63
KE + T + ++E+Y WK P LYD + H L WPSL+ +W P++ + K+
Sbjct: 202 KESGKKTQQSPSVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRL 381
Query: 64 WLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHE 123
+L T S N LV+A + A H E + + ++ I H
Sbjct: 382 YLSEQTDGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKYKTIIHP 540
Query: 124 GEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECN--PDLRLRGHQKEGYG 181
GEVNR R +PQN I+AT T S DVL++D P + G N PDL L GHQ
Sbjct: 541 GEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEF 720
Query: 182 LSWNSNLSGHLLSASDDHTVCLWDIN-----------------------AGPKEGKIVDA 218
+LS D +V LW I E V
Sbjct: 721 ALAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQTGEGTDKNESPTVGP 900
Query: 219 KAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCL 278
+ ++ GH VEDVA+ F SV DD L++WD R+ T + + + AH A+++C+
Sbjct: 901 RGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGT-NPVTKVEKAHDADLHCV 1077
Query: 279 SFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILA 333
+NP+ + ++ TGSAD TV L+D R L ++ FE HK + V WSP ++
Sbjct: 1078DWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFG 1257
Query: 334 SSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
SS D LN+WD ++ ++ ++ A P L F H GH K+ DF WN ++PW I SVS
Sbjct: 1258SSAEDGLLNIWDYDRVSKK--SDRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVS 1431
Query: 394 ED-------NIMQIWQMAENIYNDEESDVTASE 419
+D +QIW+M++ IY EE V E
Sbjct: 1432DDCETTGGGGTLQIWRMSDLIYRPEEEVVAELE 1530
>ref|NM_127510.1| putative WD-40 repeat protein, MSI4
Length = 1790
Score = 222 bits (566), Expect = 4e-56
Identities = 147/453 (32%), Positives = 213/453 (46%), Gaps = 37/453 (8%)
Frame = +1
Query: 4 KEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALH 63
KE + T + ++E+Y WK P LYD + H L WPSL+ +W P++ + K+
Sbjct: 145 KESGKKTQQSPSVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRL 324
Query: 64 WLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHE 123
+L T S N LV+A + A H E + + ++ I H
Sbjct: 325 YLSEQTDGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKYKTIIHP 483
Query: 124 GEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECN--PDLRLRGHQKEGYG 181
GEVNR R +PQN I+AT T S DVL++D P + G N PDL L GHQ
Sbjct: 484 GEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEF 663
Query: 182 LSWNSNLSGHLLSASDDHTVCLWDIN-----------------------AGPKEGKIVDA 218
+LS D +V LW I E V
Sbjct: 664 ALAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQTGEGTDKNESPTVGP 843
Query: 219 KAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCL 278
+ ++ GH VEDVA+ F SV DD L++WD R+ T + + + AH A+++C+
Sbjct: 844 RGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGT-NPVTKVEKAHDADLHCV 1020
Query: 279 SFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILA 333
+NP+ + ++ TGSAD TV L+D R L ++ FE HK + V WSP ++
Sbjct: 1021DWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFG 1200
Query: 334 SSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
SS D LN+WD ++ ++ ++ A P L F H GH K+ DF WN ++PW I SVS
Sbjct: 1201SSAEDGLLNIWDYDRVSKK--SDRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVS 1374
Query: 394 ED-------NIMQIWQMAENIYNDEESDVTASE 419
+D +QIW+M++ IY EE V E
Sbjct: 1375DDCETTGGGGTLQIWRMSDLIYRPEEEVVAELE 1473
>gb|AF028711.1|AF028711 Arabidopsis thaliana WD-40 repeat protein MSI4 (MSI4) mRNA,
complete cds
Length = 1815
Score = 222 bits (565), Expect = 6e-56
Identities = 146/449 (32%), Positives = 212/449 (46%), Gaps = 37/449 (8%)
Frame = +1
Query: 4 KEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALH 63
KE + T + ++E+Y WK P LYD + H L WPSL+ +W P++ + K+
Sbjct: 145 KESGKKTQQSPSVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRL 324
Query: 64 WLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHE 123
+L T S N LV+A + A H E + + ++ I H
Sbjct: 325 YLSEQTDGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKYKTIIHP 483
Query: 124 GEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECN--PDLRLRGHQKEGYG 181
GEVNR R +PQN I+AT T S DVL++D P + G N PDL L GHQ
Sbjct: 484 GEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHPVLGAANSRPDLILTGHQDNAEF 663
Query: 182 LSWNSNLSGHLLSASDDHTVCLWDIN-----------------------AGPKEGKIVDA 218
+LS D +V LW I E V
Sbjct: 664 ALAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQPGEGTDKNESPTVGP 843
Query: 219 KAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCL 278
+ ++ GH VEDVA+ F SV DD L++WD R+ T + + + AH A+++C+
Sbjct: 844 RGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGT-NPVTKVEKAHDADLHCV 1020
Query: 279 SFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILA 333
+NP+ + ++ TGSAD TV L+D R L ++ FE HK + V WSP ++
Sbjct: 1021DWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFG 1200
Query: 334 SSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
SS D LN+WD ++ ++ ++ A P L F H GH K+ DF WN ++PW I SVS
Sbjct: 1201SSAEDGLLNIWDYDRVSKK--SDRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVS 1374
Query: 394 ED-------NIMQIWQMAENIYNDEESDV 415
+D +QIW+M++ IY EE V
Sbjct: 1375DDCETTGGGGTLQIWRMSDLIYRPEEEVV 1461
>emb|Y18519.1|SLA18519 Silene latifolia mRNA for X1 protein
Length = 1763
Score = 217 bits (552), Expect = 2e-54
Identities = 141/439 (32%), Positives = 205/439 (46%), Gaps = 42/439 (9%)
Frame = +2
Query: 16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQ 75
++E+Y WK P LYD + H L WPSL+ +W P + + K+ +L T S
Sbjct: 44 VDEKYSQWKSLVPILYDWLANHNLVWPSLSCRWGPLIEEATYKNRQRLYLSEQTDGS-VP 220
Query: 76 NHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQN 135
N LV+A V + A H E + + + I H GEVNR R +PQN
Sbjct: 221 NTLVIANVEVVKPRVAA-AEHISKFNEE-----ARSPFVRKFKTIIHPGEVNRIRELPQN 382
Query: 136 PHIIATKTPSSDVLVFDYTKHPAKPDPSG--ECNPDLRLRGHQKEGYGLSWNSNLSGHLL 193
+I+AT T S DV ++D P +P G PDL L GHQ + +L
Sbjct: 383 SNIVATHTDSPDVYIWDLESQPNRPANLGTPASRPDLTLTGHQDNAEFALAMCSSEPLVL 562
Query: 194 SASDDHTVCLWDIN--------------------------AGPKEGKIVDAKAIFTGHSA 227
S D +V LW I+ G + + + I+ GH
Sbjct: 563 SGGKDKSVVLWSIHDHISTLATEPGSAKSPNSGSNIKKAGNGNSDNPSIGPRGIYLGHED 742
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
VEDV + F SV DD L++WD R+ T + + AH A+++C+ +NP+ E +
Sbjct: 743 TVEDVQFCPSSAQQFCSVGDDSCLILWDARAGLT-PVTKVEKAHNADLHCVDWNPHDENL 919
Query: 288 LATGSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
+ TGSAD ++ L+D RNL +H F+ H + V WSPHN +I S+ D LN
Sbjct: 920 ILTGSADSSINLFDRRNLTASGVGSPVHKFQGHDAPVLCVQWSPHNRSIFGSAAEDGLLN 1099
Query: 343 VWDLSKIG--EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED----- 395
+WD K+ E +S + P L F H GH K+ DF WN +PW + SVS+D
Sbjct: 1100IWDYEKVSKMETESGGKKSNHPAGLFFRHAGHRDKVVDFHWNSIDPWTLVSVSDDCSSSA 1279
Query: 396 --NIMQIWQMAENIYNDEE 412
+QIW++ + +Y EE
Sbjct: 1280GGGTLQIWRIIDLLYRPEE 1336
>emb|Y18517.1|SLA18517 Silene latifolia mRNA for Y1 protein
Length = 1814
Score = 216 bits (551), Expect = 2e-54
Identities = 141/439 (32%), Positives = 205/439 (46%), Gaps = 42/439 (9%)
Frame = +3
Query: 16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQ 75
++E+Y WK P LYD + H L WPSL+ +W P + + K+ +L T S
Sbjct: 114 VDEKYSQWKSLVPILYDWLANHNLVWPSLSCRWGPLIEEATYKNRQRLYLSEQTDGS-VP 290
Query: 76 NHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQN 135
N LV+A V + A H E + + + I H GEVNR R +PQN
Sbjct: 291 NTLVIANVEVVKPRVAA-AEHISKFNEE-----ARSPFVRKFKTIIHPGEVNRIRELPQN 452
Query: 136 PHIIATKTPSSDVLVFDYTKHPAKPDPSG--ECNPDLRLRGHQKEGYGLSWNSNLSGHLL 193
+I+AT T S DV ++D P +P G PDL L GHQ + +L
Sbjct: 453 SNIVATHTDSPDVYIWDLESQPNRPANWGTPASRPDLTLTGHQDNAEFALAMCSSEPLVL 632
Query: 194 SASDDHTVCLWDIN--------------------------AGPKEGKIVDAKAIFTGHSA 227
S D +V LW I+ G + + + I+ GH
Sbjct: 633 SGGKDKSVVLWSIHDHISTLATEPGSAKSPNSGSNIKKAGNGNSDNPSIGPRGIYLGHED 812
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
VEDV + F SV DD L++WD R+ T + + AH A+++C+ +NP+ E +
Sbjct: 813 TVEDVQFCPSSAQQFCSVGDDSCLILWDARAGLT-PVTKVEKAHNADLHCVDWNPHDENL 989
Query: 288 LATGSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
+ TGSAD ++ L+D RNL +H F+ H + V WSPHN +I S+ D LN
Sbjct: 990 ILTGSADSSINLFDRRNLTASGVGSPVHKFQGHDAPVLCVQWSPHNRSIFGSAAEDGLLN 1169
Query: 343 VWDLSKIG--EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED----- 395
+WD K+ E +S + P L F H GH K+ DF WN +PW + SVS+D
Sbjct: 1170IWDYEKVSKMETESGGKKSNHPAGLFFRHAGHRDKVVDFHWNSIDPWTLVSVSDDCSSSA 1349
Query: 396 --NIMQIWQMAENIYNDEE 412
+QIW++ + +Y EE
Sbjct: 1350GGGTLQIWRIIDLLYGPEE 1406
>ref|NM_119118.1| WD-40 repeat - like protein
Length = 1491
Score = 213 bits (541), Expect = 4e-53
Identities = 143/447 (31%), Positives = 212/447 (46%), Gaps = 39/447 (8%)
Frame = +1
Query: 12 EERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHT 71
++ +++ Y WK P LYD + H L WPSL+ +W P++ + K L+ L T
Sbjct: 148 QKATVDDTYSQWKTLLPILYDSFVNHTLVWPSLSCRWGPQLEQAGSKTQRLY---LSEQT 318
Query: 72 SDE-QNHLVVARVHIPNDDA-QFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRA 129
+ N LV+A N F ++K + ++ I H GEVNR
Sbjct: 319 NGSVPNTLVIANCETVNRQVISFSLPKLLNEKAH-------SPFVKKYKTIIHPGEVNRI 477
Query: 130 RYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSG--ECNPDLRLRGHQKEGYGLSWNSN 187
R +PQN I+AT T S D+L+++ P + G + PDL L GHQ +
Sbjct: 478 RELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDAEFALAMCP 657
Query: 188 LSGHLLSASDDHTVCLWDIN-----AGPKE------------------GKIVDAKAIFTG 224
+LS D +V LW+I AG G V + I+ G
Sbjct: 658 TEPFVLSGGKDKSVILWNIQDHITMAGSDSKSPGSSFKQTGEGSDKTGGPSVGPRGIYNG 837
Query: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS 284
H VEDVA+ F SV DD LM+WD R+ TS + AH A+++C+ +NP+
Sbjct: 838 HKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTG-TSPAMKVEKAHDADLHCVDWNPHD 1014
Query: 285 EFILATGSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILASSGTDR 339
++ TGSAD TV ++D RNL ++ FE H+ + V WSP ++ SS D
Sbjct: 1015NNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDG 1194
Query: 340 RLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED---- 395
LN+WD ++G++ +E A P L F H GH K+ DF W+ PW I SVS++
Sbjct: 1195LLNIWDCDRVGKK--SERATKTPDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVSDNCESI 1368
Query: 396 ---NIMQIWQMAENIYNDEESDVTASE 419
+QIW+M++ IY E+ +T E
Sbjct: 1369GGGGTLQIWRMSDLIYRPEDEVLTELE 1449
>emb|AL114645.1|CNS01BST Botrytis cinerea strain T4 cDNA library under conditions of
nitrogen deprivation
Length = 720
Score = 209 bits (532), Expect = 4e-52
Identities = 99/206 (48%), Positives = 143/206 (69%), Gaps = 7/206 (3%)
Frame = +1
Query: 9 DTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLG 68
+ +E+++INEEYK WKKN+PFLYD++++ AL+WP+LT QW P+V +P GK+Y++H L++G
Sbjct: 100 EDMEQKIINEEYKTWKKNSPFLYDMILSTALEWPTLTTQWFPDVKEPAGKNYSVHRLLIG 279
Query: 69 THTSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTG------KIECEIKIN 121
THTS+ QN+L +A V +P + + D D+ E GG+G + K+ E KI+
Sbjct: 280 THTSNGAQNYLQIANVELPKNVTPNHVDY-DEDREEIGGYGKSSSGEQAAIKMTIEQKID 456
Query: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 181
H GEVN+ARY PQNP+IIAT VL+FD TKH + P G +P + L GH+KEG+G
Sbjct: 457 HPGEVNKARYQPQNPNIIATMCVDGRVLIFDRTKHSSL--PKGVVSPQIELIGHKKEGFG 630
Query: 182 LSWNSNLSGHLLSASDDHTVCLWDIN 207
L WN +++G L + S+D TV LWD+N
Sbjct: 631 LGWNPHVAGELATGSEDKTVRLWDLN 708
Score = 42.4 bits (98), Expect = 0.083
Identities = 28/88 (31%), Positives = 44/88 (49%), Gaps = 6/88 (6%)
Frame = +1
Query: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVD------AHTAEVNCL 278
H V + + ++ ++ D +++I+D R+ +S P +V H E L
Sbjct: 457 HPGEVNKARYQPQNPNIIATMCVDGRVLIFD-RTKHSSLPKGVVSPQIELIGHKKEGFGL 633
Query: 279 SFNPYSEFILATGSADKTVALWDLRNLK 306
+NP+ LATGS DKTV LWDL L+
Sbjct: 634 GWNPHVAGELATGSEDKTVRLWDLNTLQ 717
Score = 40.0 bits (92), Expect = 0.41
Identities = 24/86 (27%), Positives = 39/86 (44%), Gaps = 7/86 (8%)
Frame = +1
Query: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDL-------RNLKLKLHTFESHKDEIFQVH 323
H EVN + P + I+AT D V ++D + + HK E F +
Sbjct: 457 HPGEVNKARYQPQNPNIIATMCVDGRVLIFDRTKHSSLPKGVVSPQIELIGHKKEGFGLG 636
Query: 324 WSPHNETILASSGTDRRLNVWDLSKI 349
W+PH LA+ D+ + +WDL+ +
Sbjct: 637 WNPHVAGELATGSEDKTVRLWDLNTL 714
Score = 38.1 bits (87), Expect = 1.6
Identities = 23/99 (23%), Positives = 46/99 (46%)
Frame = +1
Query: 305 LKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPE 364
+K+ + H E+ + + P N I+A+ D R+ ++D +K S+ P+
Sbjct: 427 IKMTIEQKIDHPGEVNKARYQPQNPNIIATMCVDGRVLIFDRTK----HSSLPKGVVSPQ 594
Query: 365 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
+ I GH + WNP+ + + SED +++W +
Sbjct: 595 IELI--GHKKEGFGLGWNPHVAGELATGSEDKTVRLWDL 705
>emb|Z98944.1|SPAC25H1 S.pombe chromosome I cosmid c25H1
Length = 14220
Score = 190 bits (482), Expect = 2e-46
Identities = 132/407 (32%), Positives = 206/407 (50%), Gaps = 17/407 (4%)
Frame = +1
Query: 13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTS 72
E I+E++ WKKN+ LY+L++T L WPSL++QWL + K + L+LGTH +
Sbjct: 7156 ENQISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAMESITEKAVLKNRLLLGTHAA 7335
Query: 73 DEQ-NHLVVARVHIP--NDDAQFDASHCDSDKGEFGGFGSVTG-KIECEIKINHEGEVNR 128
+ N L +A + +P N H + D GE GG+ K + +I H G+VNR
Sbjct: 7336 EGMPNFLQLADLDLPDFNQTILDPVKHYNEDTGELGGYSMQHSCKFQISQRILHNGDVNR 7515
Query: 129 ARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNL 188
R+MPQNP+IIAT + + +FD TK+ + P + E P++ L GH+KEG+GLSWN
Sbjct: 7516 VRHMPQNPNIIATMSSCGNAYIFDRTKYTSMP--AEEFLPNISLIGHKKEGFGLSWNRQQ 7689
Query: 189 SGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADD 248
+ L++A++D + WD+N ++ + + F + V DV +H H +L+ +V D+
Sbjct: 7690 NCRLVTAANDSKILEWDLNNFSRDTRCLTPVKDFHYDDSPVNDVEYHPHHTNLYIAVNDN 7869
Query: 249 QKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL-KL 307
I D R T S V A + + + NP + A GS ++ + LWDLRNL K
Sbjct: 7870 GIAFICDNRLQQTC--SKTVKA-SNPLFSVRHNPSIATLFALGS-EQDLQLWDLRNLNKS 8037
Query: 308 KLHTFESHKDEIFQV-----------HWS-PHNETILASSGTDRRLNVWDLSKIGEEQSA 355
+T E D +V WS H+ I+ S VW+ +K
Sbjct: 8038 VFNTSEDLSDNRLKVPSRLTLGGTSLSWSWRHSGRIV--SACQEYCYVWNFNKAN----- 8196
Query: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
L F+H GH +++ ++P E I SV++DN + IW+
Sbjct: 8197 --------PLEFVHAGHKGTVNEVDFDPFEAQCIASVADDNELHIWK 8313
Score = 40.0 bits (92), Expect = 0.41
Identities = 22/77 (28%), Positives = 37/77 (47%)
Frame = -3
Query: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 330
H V +S NP + A+G D +WD+ + ++ HKD I + WS + T
Sbjct: 13378 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGE-QICQLTGHKDSIVAIDWS-FDGT 13205
Query: 331 ILASSGTDRRLNVWDLS 347
+A+ G D ++ +W S
Sbjct: 13204 YIATGGMDSQVRLWKSS 13154
>emb|Z36064.1|SCYBR195C S.cerevisiae chromosome II reading frame ORF YBR195c
Length = 1832
Score = 184 bits (466), Expect = 2e-44
Identities = 121/419 (28%), Positives = 195/419 (45%), Gaps = 27/419 (6%)
Frame = -3
Query: 16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-- 73
+ E Y WKKNT LYD + T++ +WPSLT Q+ P++ + H ++L + TS
Sbjct: 1422 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDE----HRILLSSFTSSQK 1255
Query: 74 -EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSV---TGKIECEIKINH-EGEVNR 128
E + ++++ ++ D D+ EF S + + +I I GE NR
Sbjct: 1254 PEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNR 1075
Query: 129 ARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNP--DLRLRGHQ---------- 176
ARY+PQNP IIA + + +FD TKH + + + + +L G
Sbjct: 1074 ARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMD 895
Query: 177 ------KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAI-FTGHSAVV 229
E L+WN LLS+ + V +WDI E I+D + V
Sbjct: 894 TSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINSDGTAV 715
Query: 230 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 289
DV W H+SLF + + + + D R+ S+ + H VN FN + ILA
Sbjct: 714 NDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNR-EKHDGGVNSCRFNYKNSLILA 538
Query: 290 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT-DRRLNVWDLSK 348
+ ++ + LWD+RN+ H + + WSP+ +T+LA++G D + +WD S
Sbjct: 537 SADSNGRLNLWDIRNMNKSPIATMEHGTSVSTLEWSPNFDTVLATAGQEDGLVKLWDTSC 358
Query: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 407
E +F HGGH ++D SW+ ++PW++CSV+ DN + IW+ A N+
Sbjct: 357 --------------EETIFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHIWKPAGNL 223
>emb|Z21487.1|SCCHRIIFG S.cerevisiae RIM, MSI1, PGI, and ribosomal protein L21 genes
Length = 30981
Score = 184 bits (466), Expect = 2e-44
Identities = 121/419 (28%), Positives = 195/419 (45%), Gaps = 27/419 (6%)
Frame = -2
Query: 16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-- 73
+ E Y WKKNT LYD + T++ +WPSLT Q+ P++ + H ++L + TS
Sbjct: 5054 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDE----HRILLSSFTSSQK 4887
Query: 74 -EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSV---TGKIECEIKINH-EGEVNR 128
E + ++++ ++ D D+ EF S + + +I I GE NR
Sbjct: 4886 PEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNR 4707
Query: 129 ARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNP--DLRLRGHQ---------- 176
ARY+PQNP IIA + + +FD TKH + + + + +L G
Sbjct: 4706 ARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMD 4527
Query: 177 ------KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAI-FTGHSAVV 229
E L+WN LLS+ + V +WDI E I+D + V
Sbjct: 4526 TSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINSDGTAV 4347
Query: 230 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 289
DV W H+SLF + + + + D R+ S+ + H VN FN + ILA
Sbjct: 4346 NDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNR-EKHDGGVNSCRFNYKNSLILA 4170
Query: 290 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT-DRRLNVWDLSK 348
+ ++ + LWD+RN+ H + + WSP+ +T+LA++G D + +WD S
Sbjct: 4169 SADSNGRLNLWDIRNMNKSPIATMEHGTSVSTLEWSPNFDTVLATAGQEDGLVKLWDTSC 3990
Query: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 407
E +F HGGH ++D SW+ ++PW++CSV+ DN + IW+ A N+
Sbjct: 3989 --------------EETIFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHIWKPAGNL 3855
Score = 69.3 bits (168), Expect = 6e-10
Identities = 65/245 (26%), Positives = 106/245 (42%), Gaps = 1/245 (0%)
Frame = -3
Query: 116 CEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGH 175
C+ + H G V + P N ++++ + V ++ H A + +GH
Sbjct: 10198 CKTLVGHSGTVYSTSFSPDNKYLLSGSEDKT-VRLWSMDTHTAL----------VSYKGH 10052
Query: 176 QKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWH 235
+ +S+ S L + +AS D T LW + + IF GH V+ V++H
Sbjct: 10051 NHPVWDVSF-SPLGHYFATASHDQTARLWSCDH-------IYPLRIFAGHLNDVDCVSFH 9896
Query: 236 LLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADK 295
+F + D+ +WD +T L HTA V ++ P + L+TGS D
Sbjct: 9895 PNGCYVFTG-SSDKTCRMWDV---STGDSVRLFLGHTAPVISIAVCPDGRW-LSTGSEDG 9731
Query: 296 TVALWDLRNLKLKLHTFESH-KDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354
+ +WD+ K +L H K+ I+ + +S +L S G D + VWDL K E S
Sbjct: 9730 IINVWDIGTGK-RLKQMRGHGKNAIYSLSYSKEGN-VLISGGADHTVRVWDLKKATTEPS 9557
Query: 355 AEDAE 359
AE E
Sbjct: 9556 AEPDE 9542
>gb|M27300.1|YSCMSI1 S.cerevisiae MSI1 gene, complete cds
Length = 1574
Score = 184 bits (466), Expect = 2e-44
Identities = 121/419 (28%), Positives = 195/419 (45%), Gaps = 27/419 (6%)
Frame = +1
Query: 16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-- 73
+ E Y WKKNT LYD + T++ +WPSLT Q+ P++ + H ++L + TS
Sbjct: 178 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDE----HRILLSSFTSSQK 345
Query: 74 -EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSV---TGKIECEIKINH-EGEVNR 128
E + ++++ ++ D D+ EF S + + +I I GE NR
Sbjct: 346 PEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNR 525
Query: 129 ARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNP--DLRLRGHQ---------- 176
ARY+PQNP IIA + + +FD TKH + + + + +L G
Sbjct: 526 ARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMD 705
Query: 177 ------KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAI-FTGHSAVV 229
E L+WN LLS+ + V +WDI E I+D + V
Sbjct: 706 TSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINSDGTAV 885
Query: 230 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 289
DV W H+SLF + + + + D R+ S+ + H VN FN + ILA
Sbjct: 886 NDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNR-EKHDGGVNSCRFNYKNSLILA 1062
Query: 290 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT-DRRLNVWDLSK 348
+ ++ + LWD+RN+ H + + WSP+ +T+LA++G D + +WD S
Sbjct: 1063SADSNGRLNLWDIRNMNKSPIATMEHGTSVSTLEWSPNFDTVLATAGQEDGLVKLWDTSC 1242
Query: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 407
E +F HGGH ++D SW+ ++PW++CSV+ DN + IW+ A N+
Sbjct: 1243--------------EETIFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHIWKPAGNL 1377
>emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 82
Length = 195165
Score = 134 bits (338), Expect(2) = 2e-39
Identities = 65/129 (50%), Positives = 85/129 (65%), Gaps = 29/129 (22%)
Frame = -2
Query: 315 HKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK-------------------------- 348
++ E+FQV W P++ET+LASSG DRRL VWD+++
Sbjct: 137978 YRGEVFQVEWDPNHETVLASSGEDRRLMVWDINRYHSRYFPFHLIQN*NWIS*FQFGGSF 137799
Query: 349 -IGEEQSAE--DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 405
+G+EQ DAEDGPPELLF HGGH AKISDF+WN +EPWVI SV+EDN +Q+WQMAE
Sbjct: 137798 RVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAE 137619
Query: 406 NIYNDEESD 414
+IY +++ D
Sbjct: 137618 SIYREDDED 137592
Score = 112 bits (281), Expect = 5e-23
Identities = 51/96 (53%), Positives = 69/96 (71%)
Frame = -2
Query: 113 KIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRL 172
++E + KI +GEVNRAR MPQ P ++ KT S+V +FDY + KP S EC+PDLRL
Sbjct: 138947 QVEIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRL 138771
Query: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINA 208
GH++EGYGL+W+S G+LLS S D +CLWD++A
Sbjct: 138770 MGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSA 138663
Score = 91.7 bits (226), Expect = 1e-16
Identities = 43/79 (54%), Positives = 58/79 (72%), Gaps = 3/79 (3%)
Frame = -3
Query: 16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD--YALHWLVLGTHTS- 72
+ EE+ IWK+NTPFLYDL+++H L+WPSLT+ W+P P KD +A+H L+LGTHTS
Sbjct: 139489 VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHTSG 139310
Query: 73 DEQNHLVVARVHIPNDDAQ 91
Q+ L+VA V IP DA+
Sbjct: 139309 GAQDFLMVADVVIPTPDAE 139253
Score = 59.7 bits (143), Expect = 5e-07
Identities = 27/58 (46%), Positives = 39/58 (66%)
Frame = -1
Query: 222 FTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLS 279
F GH +++EDVAWH+ +E++FGS DD +L+IWD R+N + H V H EV +S
Sbjct: 138534 F*GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN---QMQHQVKVHEREV*TIS 138370
Score = 53.9 bits (128), Expect(2) = 2e-39
Identities = 23/43 (53%), Positives = 32/43 (73%)
Frame = -3
Query: 274 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK 316
++N LSFNP++E++LAT S+D TVAL+DLR L LH H+
Sbjct: 138190 QINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHE 138062
Score = 41.6 bits (96), Expect = 0.14
Identities = 23/64 (35%), Positives = 37/64 (56%), Gaps = 2/64 (3%)
Frame = -3
Query: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLKLKLHTFESHKDEIFQVHWS 325
++ H VN +SFN + +L +GS D+ V LWD L N+KL H+ H + +FQ +
Sbjct: 180955 LEKHKGCVNTVSFNAEGD-VLISGSDDRRVVLWDWQLGNVKLSFHS--GHANNVFQAKFM 180785
Query: 326 PHNE 329
P ++
Sbjct: 180784 PFSD 180773
Score = 40.8 bits (94), Expect = 0.24
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 2/134 (1%)
Frame = -2
Query: 229 VEDVAWHLLHESLFGSVADDQKLMIWD-TRSNTTSKPSHLVDAHTAEVNCLS-FNPYSEF 286
V V W HE++ S +D++LM+WD R ++ P HL+ N +S F F
Sbjct: 137966 VFQVEWDPNHETVLASSGEDRRLMVWDINRYHSRYFPFHLIQ----N*NWIS*FQFGGSF 137799
Query: 287 ILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
G + L L + HK +I W+ +++S D L VW +
Sbjct: 137798 --RVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQM 137625
Query: 347 SKIGEEQSAEDAED 360
++ + ED +D
Sbjct: 137624 AESIYREDDEDEDD 137583
Score = 34.3 bits (77), Expect(2) = 0.20
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Frame = -2
Query: 274 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFE--------SHKDEIFQVHWS 325
EVN P ++ ++ V L+D L K T E H+ E + + WS
Sbjct: 138911 EVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWS 138732
Query: 326 PHNETILASSGTDRRLNVWDLS 347
E L S D+R+ +WD+S
Sbjct: 138731 SFKEGYLLSGSQDQRICLWDVS 138666
Score = 25.4 bits (54), Expect(2) = 0.20
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -1
Query: 358 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 406
A D PE F GH + I D +W+ + S +D + IW + N
Sbjct: 138561 ASDLIPETWF*--GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN 138421
>emb|AL035522.1|ATT12J5 Arabidopsis thaliana DNA chromosome 4, BAC clone T12J5 (ESSAII
project)
Length = 84499
Score = 134 bits (338), Expect(2) = 2e-39
Identities = 65/129 (50%), Positives = 85/129 (65%), Gaps = 29/129 (22%)
Frame = -3
Query: 315 HKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK-------------------------- 348
++ E+FQV W P++ET+LASSG DRRL VWD+++
Sbjct: 8057 YRGEVFQVEWDPNHETVLASSGEDRRLMVWDINRYHSRYFPFHLIQN*NWIS*FQFGGSF 7878
Query: 349 -IGEEQSAE--DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 405
+G+EQ DAEDGPPELLF HGGH AKISDF+WN +EPWVI SV+EDN +Q+WQMAE
Sbjct: 7877 RVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAE 7698
Query: 406 NIYNDEESD 414
+IY +++ D
Sbjct: 7697 SIYREDDED 7671
Score = 112 bits (281), Expect = 5e-23
Identities = 51/96 (53%), Positives = 69/96 (71%)
Frame = -3
Query: 113 KIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRL 172
++E + KI +GEVNRAR MPQ P ++ KT S+V +FDY + KP S EC+PDLRL
Sbjct: 9026 QVEIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRL 8850
Query: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINA 208
GH++EGYGL+W+S G+LLS S D +CLWD++A
Sbjct: 8849 MGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSA 8742
Score = 91.7 bits (226), Expect = 1e-16
Identities = 43/79 (54%), Positives = 58/79 (72%), Gaps = 3/79 (3%)
Frame = -1
Query: 16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD--YALHWLVLGTHTS- 72
+ EE+ IWK+NTPFLYDL+++H L+WPSLT+ W+P P KD +A+H L+LGTHTS
Sbjct: 9568 VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHTSG 9389
Query: 73 DEQNHLVVARVHIPNDDAQ 91
Q+ L+VA V IP DA+
Sbjct: 9388 GAQDFLMVADVVIPTPDAE 9332
Score = 59.7 bits (143), Expect = 5e-07
Identities = 27/58 (46%), Positives = 39/58 (66%)
Frame = -2
Query: 222 FTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLS 279
F GH +++EDVAWH+ +E++FGS DD +L+IWD R+N + H V H EV +S
Sbjct: 8613 F*GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN---QMQHQVKVHEREV*TIS 8449
Score = 53.9 bits (128), Expect(2) = 2e-39
Identities = 23/43 (53%), Positives = 32/43 (73%)
Frame = -1
Query: 274 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK 316
++N LSFNP++E++LAT S+D TVAL+DLR L LH H+
Sbjct: 8269 QINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHE 8141
Score = 41.6 bits (96), Expect = 0.14
Identities = 23/64 (35%), Positives = 37/64 (56%), Gaps = 2/64 (3%)
Frame = -2
Query: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLKLKLHTFESHKDEIFQVHWS 325
++ H VN +SFN + +L +GS D+ V LWD L N+KL H+ H + +FQ +
Sbjct: 51033 LEKHKGCVNTVSFNAEGD-VLISGSDDRRVVLWDWQLGNVKLSFHS--GHANNVFQAKFM 50863
Query: 326 PHNE 329
P ++
Sbjct: 50862 PFSD 50851
Score = 40.8 bits (94), Expect = 0.24
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 2/134 (1%)
Frame = -3
Query: 229 VEDVAWHLLHESLFGSVADDQKLMIWD-TRSNTTSKPSHLVDAHTAEVNCLS-FNPYSEF 286
V V W HE++ S +D++LM+WD R ++ P HL+ N +S F F
Sbjct: 8045 VFQVEWDPNHETVLASSGEDRRLMVWDINRYHSRYFPFHLIQ----N*NWIS*FQFGGSF 7878
Query: 287 ILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
G + L L + HK +I W+ +++S D L VW +
Sbjct: 7877 --RVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQM 7704
Query: 347 SKIGEEQSAEDAED 360
++ + ED +D
Sbjct: 7703 AESIYREDDEDEDD 7662
Score = 34.3 bits (77), Expect(2) = 0.21
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Frame = -3
Query: 274 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFE--------SHKDEIFQVHWS 325
EVN P ++ ++ V L+D L K T E H+ E + + WS
Sbjct: 8990 EVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWS 8811
Query: 326 PHNETILASSGTDRRLNVWDLS 347
E L S D+R+ +WD+S
Sbjct: 8810 SFKEGYLLSGSQDQRICLWDVS 8745
Score = 25.4 bits (54), Expect(2) = 0.21
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2
Query: 358 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 406
A D PE F GH + I D +W+ + S +D + IW + N
Sbjct: 8640 ASDLIPETWF*--GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN 8500
>emb|AL022023.1|ATM4E13 Arabidopsis thaliana DNA chromosome 4, BAC clone M4E13 (ESSAII project)
Length = 80346
Score = 134 bits (338), Expect(2) = 2e-39
Identities = 65/129 (50%), Positives = 85/129 (65%), Gaps = 29/129 (22%)
Frame = -2
Query: 315 HKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK-------------------------- 348
++ E+FQV W P++ET+LASSG DRRL VWD+++
Sbjct: 39011 YRGEVFQVEWDPNHETVLASSGEDRRLMVWDINRYHSRYFPFHLIQN*NWIS*FQFGGSF 38832
Query: 349 -IGEEQSAE--DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 405
+G+EQ DAEDGPPELLF HGGH AKISDF+WN +EPWVI SV+EDN +Q+WQMAE
Sbjct: 38831 RVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAE 38652
Query: 406 NIYNDEESD 414
+IY +++ D
Sbjct: 38651 SIYREDDED 38625
Score = 112 bits (281), Expect = 5e-23
Identities = 51/96 (53%), Positives = 69/96 (71%)
Frame = -2
Query: 113 KIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRL 172
++E + KI +GEVNRAR MPQ P ++ KT S+V +FDY + KP S EC+PDLRL
Sbjct: 39980 QVEIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRL 39804
Query: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINA 208
GH++EGYGL+W+S G+LLS S D +CLWD++A
Sbjct: 39803 MGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSA 39696
Score = 91.7 bits (226), Expect = 1e-16
Identities = 43/79 (54%), Positives = 58/79 (72%), Gaps = 3/79 (3%)
Frame = -3
Query: 16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD--YALHWLVLGTHTS- 72
+ EE+ IWK+NTPFLYDL+++H L+WPSLT+ W+P P KD +A+H L+LGTHTS
Sbjct: 40522 VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHTSG 40343
Query: 73 DEQNHLVVARVHIPNDDAQ 91
Q+ L+VA V IP DA+
Sbjct: 40342 GAQDFLMVADVVIPTPDAE 40286
Score = 59.7 bits (143), Expect = 5e-07
Identities = 27/58 (46%), Positives = 39/58 (66%)
Frame = -1
Query: 222 FTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLS 279
F GH +++EDVAWH+ +E++FGS DD +L+IWD R+N + H V H EV +S
Sbjct: 39567 F*GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN---QMQHQVKVHEREV*TIS 39403
Score = 53.9 bits (128), Expect(2) = 2e-39
Identities = 23/43 (53%), Positives = 32/43 (73%)
Frame = -3
Query: 274 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK 316
++N LSFNP++E++LAT S+D TVAL+DLR L LH H+
Sbjct: 39223 QINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHE 39095
Score = 40.8 bits (94), Expect = 0.24
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 2/134 (1%)
Frame = -2
Query: 229 VEDVAWHLLHESLFGSVADDQKLMIWD-TRSNTTSKPSHLVDAHTAEVNCLS-FNPYSEF 286
V V W HE++ S +D++LM+WD R ++ P HL+ N +S F F
Sbjct: 38999 VFQVEWDPNHETVLASSGEDRRLMVWDINRYHSRYFPFHLIQ----N*NWIS*FQFGGSF 38832
Query: 287 ILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
G + L L + HK +I W+ +++S D L VW +
Sbjct: 38831 --RVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQM 38658
Query: 347 SKIGEEQSAEDAED 360
++ + ED +D
Sbjct: 38657 AESIYREDDEDEDD 38616
Score = 34.3 bits (77), Expect(2) = 0.21
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Frame = -2
Query: 274 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFE--------SHKDEIFQVHWS 325
EVN P ++ ++ V L+D L K T E H+ E + + WS
Sbjct: 39944 EVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWS 39765
Query: 326 PHNETILASSGTDRRLNVWDLS 347
E L S D+R+ +WD+S
Sbjct: 39764 SFKEGYLLSGSQDQRICLWDVS 39699
Score = 25.4 bits (54), Expect(2) = 0.21
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -1
Query: 358 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 406
A D PE F GH + I D +W+ + S +D + IW + N
Sbjct: 39594 ASDLIPETWF*--GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN 39454
>gb|AC005825.3|AC005825 Arabidopsis thaliana chromosome II section 96 of 255 of the complete
sequence. Sequence from clones T24I21, F12A24
Length = 97380
Score = 152 bits (385), Expect = 4e-35
Identities = 80/193 (41%), Positives = 111/193 (57%), Gaps = 30/193 (15%)
Frame = -3
Query: 113 KIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRL 172
++E +I +GEVNRAR MPQ P ++ KT +V +FDY KH AK S EC+PDLRL
Sbjct: 87430 QVEIRQRIRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTS-ECDPDLRL 87254
Query: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAK------------- 219
GH KEGYGLSW+ G+LLS S D +CLWD++A P++ K+++A
Sbjct: 87253 VGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQD-KVLNAMFVYEVKGTV*LVS 87077
Query: 220 -----------------AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTS 262
+F GH + + DV+WH+ +E+LFGS +D +L+IWDTR+N
Sbjct: 87076 FFCFQKMWFDTSDFTLLILF*GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTN--- 86906
Query: 263 KPSHLVDAHTAEV 275
+ H V H EV
Sbjct: 86905 QMQHQVKVHEREV 86867
Score = 107 bits (267), Expect(2) = 4e-39
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 2/67 (2%)
Frame = -1
Query: 348 KIGEEQSAE--DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 405
++GEEQ DAEDGPPELLF HGGH AKISDF+WN NEPWVI SV+EDN +Q+WQMAE
Sbjct: 86244 RVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAE 86065
Query: 406 NIYNDEE 412
+IY DEE
Sbjct: 86064 SIYRDEE 86044
Score = 85.5 bits (210), Expect = 9e-15
Identities = 42/96 (43%), Positives = 62/96 (63%), Gaps = 7/96 (7%)
Frame = -3
Query: 3 SKEMFEDTVEERV----INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGK 58
++E+ D +E + E++ +WKKNTPFLYDL+++H L+WPSLTV W+P P
Sbjct: 87982 AREIMADEGKEETGMGQVEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVA 87803
Query: 59 D--YALHWLVLGTHTS-DEQNHLVVARVHIPNDDAQ 91
D + +H L+LGTHTS Q+ L+VA V P +A+
Sbjct: 87802 DSYFGVHKLILGTHTSGSAQDFLMVADVVTPTPNAE 87695
Score = 80.1 bits (196), Expect(2) = 4e-39
Identities = 46/127 (36%), Positives = 61/127 (47%), Gaps = 51/127 (40%)
Frame = -2
Query: 273 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESH----------------- 315
++VN LSFNP++E++LAT S+D TVAL+DLR L LH SH
Sbjct: 86723 SQVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEYVPLHFLITSALSINC 86544
Query: 316 ----------------------------------KDEIFQVHWSPHNETILASSGTDRRL 341
+ E+FQV W P++ET+LASSG DRRL
Sbjct: 86543 VRTKC*YLWTPVD*VTVKDCLL*KSTFLKKYSDFRGEVFQVEWDPNHETVLASSGEDRRL 86364
Query: 342 NVWDLSK 348
VWDL++
Sbjct: 86363 MVWDLNR 86343
Score = 41.6 bits (96), Expect = 0.14
Identities = 38/165 (23%), Positives = 59/165 (35%), Gaps = 32/165 (19%)
Frame = -3
Query: 274 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFE--------SHKDEIFQVHWS 325
EVN P ++ ++ V L+D K T E H E + + WS
Sbjct: 87394 EVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTSECDPDLRLVGHDKEGYGLSWS 87215
Query: 326 PHNETILASSGTDRRLNVWDLSKIGEEQSAE------------------------DAEDG 361
P E L S D+++ +WD+S +++ D D
Sbjct: 87214 PFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEVKGTV*LVSFFCFQKMWFDTSDF 87035
Query: 362 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 406
LL + GH + I+D SW+ + S ED + IW N
Sbjct: 87034 --TLLILF*GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTN 86906
>ref|NM_127512.1| putative WD-40 repeat protein
Length = 1617
Score = 160 bits (406), Expect = 2e-37
Identities = 120/376 (31%), Positives = 180/376 (46%), Gaps = 27/376 (7%)
Frame = +1
Query: 69 THTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNR 128
T+ S ++ +V D+ + D DSD + G S T I+ ++ H G VNR
Sbjct: 361 TNVSGKRRDVVPKTFGNGEDEDEDDEDDSDSDDDD-GDEASKTPNIQVR-RVAHHGCVNR 534
Query: 129 ARYMPQNPHIIATKTPSSDVLVFDYTKHP---AKPDPSGECN--------PDLRLRGHQK 177
R MPQN HI + S V V+D + H A+ + G+ P + GH+
Sbjct: 535 IRAMPQNSHICVSWADSGHVQVWDMSSHLNALAESETEGKDGTSPVLNQAPLVNFSGHKD 714
Query: 178 EGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLL 237
EGY + W+ +G LLS + LW+ P G F GH+A VED+ W
Sbjct: 715 EGYAIDWSPATAGRLLSGDCKSMIHLWE----PASGSWAVDPIPFAGHTASVEDLQWSPA 882
Query: 238 HESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTV 297
E++F S + D + +WD R + P+ AH A+VN +S+N + +LA+GS D T
Sbjct: 883 EENVFASCSVDGSVAVWDIRLGKS--PALSFKAHNADVNVISWNRLASCMLASGSDDGTF 1056
Query: 298 ALWDLRNLK---LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQ 353
++ DLR +K + FE HK I + WS H + LA + D +L +WDLS + EE+
Sbjct: 1057SIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLTIWDLSLEKDEEE 1236
Query: 354 SAE----------DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED--NIMQIW 401
AE +D PP+LLF+H G + + W+ P +I S + D NI+
Sbjct: 1237EAEFNAQTKELVNTPQDLPPQLLFVHQGQ-KDLKELHWHNQIPGMIISTAGDGFNIL--- 1404
Query: 402 QMAENIYNDEESDVTA 417
M NI N S++ A
Sbjct: 1405-MPYNIQNTLPSELPA 1449
>gb|AF370506.1|AF370506 Arabidopsis thaliana putative WD-40 repeat protein (At2g19540;
F3P11.14) mRNA, complete cds
Length = 1617
Score = 160 bits (406), Expect = 2e-37
Identities = 120/376 (31%), Positives = 180/376 (46%), Gaps = 27/376 (7%)
Frame = +1
Query: 69 THTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNR 128
T+ S ++ +V D+ + D DSD + G S T I+ ++ H G VNR
Sbjct: 361 TNVSGKRRDVVPKTFGNGEDEDEDDEDDSDSDDDD-GDEASKTPNIQVR-RVAHHGCVNR 534
Query: 129 ARYMPQNPHIIATKTPSSDVLVFDYTKHP---AKPDPSGECN--------PDLRLRGHQK 177
R MPQN HI + S V V+D + H A+ + G+ P + GH+
Sbjct: 535 IRAMPQNSHICVSWADSGHVQVWDMSSHLNALAESETEGKDGTSPVLNQAPLVNFSGHKD 714
Query: 178 EGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLL 237
EGY + W+ +G LLS + LW+ P G F GH+A VED+ W
Sbjct: 715 EGYAIDWSPATAGRLLSGDCKSMIHLWE----PASGSWAVDPIPFAGHTASVEDLQWSPA 882
Query: 238 HESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTV 297
E++F S + D + +WD R + P+ AH A+VN +S+N + +LA+GS D T
Sbjct: 883 EENVFASCSVDGSVAVWDIRLGKS--PALSFKAHNADVNVISWNRLASCMLASGSDDGTF 1056
Query: 298 ALWDLRNLK---LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQ 353
++ DLR +K + FE HK I + WS H + LA + D +L +WDLS + EE+
Sbjct: 1057SIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLTIWDLSLEKDEEE 1236
Query: 354 SAE----------DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED--NIMQIW 401
AE +D PP+LLF+H G + + W+ P +I S + D NI+
Sbjct: 1237EAEFNAQTKELVNTPQDLPPQLLFVHQGQ-KDLKELHWHNQIPGMIISTAGDGFNIL--- 1404
Query: 402 QMAENIYNDEESDVTA 417
M NI N S++ A
Sbjct: 1405-MPYNIQNTLPSELPA 1449
>ref|XM_067237.1| Homo sapiens similar to Rbap46 polypeptide (LOC131167), mRNA
Length = 630
Score = 158 bits (399), Expect = 1e-36
Identities = 104/262 (39%), Positives = 129/262 (48%), Gaps = 17/262 (6%)
Frame = +1
Query: 1 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 59
M +KE F++ VEE VI EEYKIWK NT F YDLVMT AL+WPSLT QWLP+VT+PEGK
Sbjct: 40 MTNKEAAFDNAVEEHVIKEEYKIWKNNTSFPYDLVMTQALEWPSLTAQWLPDVTRPEGK- 216
Query: 60 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 119
D +H +V H ++
Sbjct: 217 -------------DFSSHRLVPGTHT-------------------------------SVE 264
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
NH + PS D + D + + +K GEC DL L GHQK G
Sbjct: 265 QNH-----------------LVQLPSDDAQL-DASHYNSK---KGECG-DLHLCGHQKAG 378
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV---------- 229
GL N NLSGHLL SD+HT+CLWDI+A E K+++ K IFTGH+AV
Sbjct: 379 CGLLRNPNLSGHLLITSDNHTICLWDISAVSNEEKVLNVKTIFTGHTAVFGDRDASSHLY 558
Query: 230 ------EDVAWHLLHESLFGSV 245
+D + HL HESLFGS+
Sbjct: 559 HNLYYGKDASSHLFHESLFGSI 624
>gb|AE003785.2|AE003785 Drosophila melanogaster genomic scaffold 142000013386052 section 4 of 5,
complete sequence
Length = 296202
Score = 130 bits (326), Expect = 3e-28
Identities = 105/357 (29%), Positives = 166/357 (46%), Gaps = 27/357 (7%)
Frame = +1
Query: 64 WLVLGTHTSDEQ-NHLVVARV---HIPNDDAQFDASHCDSDKGEFGGFGSVTG-KIECEI 118
++V GT S N+L+V ++ H D+ + + D+ + + ++ C +
Sbjct: 106198 YIVAGTQASRAHVNNLIVMKMSNLHKTQDNDGDEDEELEDDQDDVTDREELKKPQMTCAL 106377
Query: 119 KINHEGEVNRARYMPQNPHIIATK-TPSSDVLVFDYTK--------HPAKPDPSGECNPD 169
+ H+G VNR R + A + V ++D T+ AK E P
Sbjct: 106378 -VKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPV 106554
Query: 170 LRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAIFTGHSA 227
GHQ+EG+ + W+ + G L + + +W P E VD + + GHS
Sbjct: 106555 FTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWT----PVEDGTWKVDQRPL-AGHSQ 106719
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLV--DAHTAEVNCLSFNPYSE 285
VED+ W S+ S + D+ + IWD R++ K L DAH ++VN +S+N
Sbjct: 106720 SVEDLQWSPNERSVLASCSVDKTIRIWDCRASP-QKACMLTCEDAHQSDVNVISWNRNEP 106896
Query: 286 FILATGSADKTVALWDLRNLKLK--LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
FI A+G D + +WDLR + K + TF+ H D I V WSP T+LAS G D ++ +
Sbjct: 106897 FI-ASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIAL 107073
Query: 344 WDLSKIGEEQSAEDAEDG-------PPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
WDL+ + A D PP+LLFIH G +I + W+P P V+ S +
Sbjct: 107074 WDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQ-KEIKELHWHPQLPGVLLSTA 107241
Score = 52.0 bits (123), Expect = 1e-04
Identities = 28/91 (30%), Positives = 42/91 (45%)
Frame = +1
Query: 311 TFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHG 370
TF H+ E F + WSP + +LA+ R ++VW E + P
Sbjct: 106558 TFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWT----PVEDGTWKVDQRPL------A 106707
Query: 371 GHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
GH+ + D W+PNE V+ S S D ++IW
Sbjct: 106708 GHSQSVEDLQWSPNERSVLASCSVDKTIRIW 106800
>gb|AC007054.24|AC007054 Drosophila melanogaster, chromosome 2R, region 41E-41E, BAC clone
BACR45O18, complete sequence
Length = 176510
Score = 130 bits (326), Expect = 3e-28
Identities = 105/357 (29%), Positives = 166/357 (46%), Gaps = 27/357 (7%)
Frame = +1
Query: 64 WLVLGTHTSDEQ-NHLVVARV---HIPNDDAQFDASHCDSDKGEFGGFGSVTG-KIECEI 118
++V GT S N+L+V ++ H D+ + + D+ + + ++ C +
Sbjct: 80659 YIVAGTQASRAHVNNLIVMKMSNLHKTQDNDGDEDEELEDDQDDVTDREELKKPQMTCAL 80838
Query: 119 KINHEGEVNRARYMPQNPHIIATK-TPSSDVLVFDYTK--------HPAKPDPSGECNPD 169
+ H+G VNR R + A + V ++D T+ AK E P
Sbjct: 80839 -VKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPV 81015
Query: 170 LRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAIFTGHSA 227
GHQ+EG+ + W+ + G L + + +W P E VD + + GHS
Sbjct: 81016 FTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWT----PVEDGTWKVDQRPL-AGHSQ 81180
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLV--DAHTAEVNCLSFNPYSE 285
VED+ W S+ S + D+ + IWD R++ K L DAH ++VN +S+N
Sbjct: 81181 SVEDLQWSPNERSVLASCSVDKTIRIWDCRASP-QKACMLTCEDAHQSDVNVISWNRNEP 81357
Query: 286 FILATGSADKTVALWDLRNLKLK--LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
FI A+G D + +WDLR + K + TF+ H D I V WSP T+LAS G D ++ +
Sbjct: 81358 FI-ASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIAL 81534
Query: 344 WDLSKIGEEQSAEDAEDG-------PPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
WDL+ + A D PP+LLFIH G +I + W+P P V+ S +
Sbjct: 81535 WDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQ-KEIKELHWHPQLPGVLLSTA 81702
Score = 52.0 bits (123), Expect = 1e-04
Identities = 28/91 (30%), Positives = 42/91 (45%)
Frame = +1
Query: 311 TFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHG 370
TF H+ E F + WSP + +LA+ R ++VW E + P
Sbjct: 81019 TFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWT----PVEDGTWKVDQRPL------A 81168
Query: 371 GHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
GH+ + D W+PNE V+ S S D ++IW
Sbjct: 81169 GHSQSVEDLQWSPNERSVLASCSVDKTIRIW 81261
>gb|AY071477.1| Drosophila melanogaster RE55020 full length cDNA
Length = 1544
Score = 130 bits (326), Expect = 3e-28
Identities = 105/357 (29%), Positives = 166/357 (46%), Gaps = 27/357 (7%)
Frame = +3
Query: 64 WLVLGTHTSDEQ-NHLVVARV---HIPNDDAQFDASHCDSDKGEFGGFGSVTG-KIECEI 118
++V GT S N+L+V ++ H D+ + + D+ + + ++ C +
Sbjct: 372 YIVAGTQASRAHVNNLIVMKMSNLHKTQDNDGDEDEELEDDQDDVTDREELKKPQMTCAL 551
Query: 119 KINHEGEVNRARYMPQNPHIIATK-TPSSDVLVFDYTK--------HPAKPDPSGECNPD 169
+ H+G VNR R + A + V ++D T+ AK E P
Sbjct: 552 -VKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPV 728
Query: 170 LRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAIFTGHSA 227
GHQ+EG+ + W+ + G L + + +W P E VD + + GHS
Sbjct: 729 FTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWT----PVEDGTWKVDQRPL-AGHSQ 893
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLV--DAHTAEVNCLSFNPYSE 285
VED+ W S+ S + D+ + IWD R++ K L DAH ++VN +S+N
Sbjct: 894 SVEDLQWSPNERSVLASCSVDKTIRIWDCRASP-QKACMLTCEDAHQSDVNVISWNRNEP 1070
Query: 286 FILATGSADKTVALWDLRNLKLK--LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
FI A+G D + +WDLR + K + TF+ H D I V WSP T+LAS G D ++ +
Sbjct: 1071FI-ASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIAL 1247
Query: 344 WDLSKIGEEQSAEDAEDG-------PPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
WDL+ + A D PP+LLFIH G +I + W+P P V+ S +
Sbjct: 1248WDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQ-KEIKELHWHPQLPGVLLSTA 1415
Score = 52.0 bits (123), Expect = 1e-04
Identities = 28/91 (30%), Positives = 42/91 (45%)
Frame = +3
Query: 311 TFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHG 370
TF H+ E F + WSP + +LA+ R ++VW E + P
Sbjct: 732 TFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWT----PVEDGTWKVDQRPL------A 881
Query: 371 GHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
GH+ + D W+PNE V+ S S D ++IW
Sbjct: 882 GHSQSVEDLQWSPNERSVLASCSVDKTIRIW 974
>emb|AL353012.1|SPBC1711 S.pombe chromosome II cosmid c1711
Length = 38000
Score = 127 bits (318), Expect = 3e-27
Identities = 114/402 (28%), Positives = 187/402 (46%), Gaps = 32/402 (7%)
Frame = +3
Query: 28 PFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALH-WLVLGTHTSDEQ-NHLVVARV-- 83
P +Y+++ ++WP L+ L + E + + +LV G+ D N L V ++
Sbjct: 15531 PSVYEMLHNIQVKWPFLSFDILQDSLGEERRAWPHQMYLVGGSQALDSNDNELTVMKLSQ 15710
Query: 84 -----HIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYM--PQNP 136
H NDDA D S + D I I+ +G NR R P N
Sbjct: 15711 LYKTQHDENDDAS-DNSDVEEDP------------ILEHKSISTKGACNRVRSARRPANS 15851
Query: 137 H---IIATKTPSSDVLVFDYTKHPAKPDPSG------ECNPDLRLRGHQKEGYGLSWNSN 187
++A+ + V ++D H D G E +P + H+ EGY L W S
Sbjct: 15852 SKESLLASFHETGKVHIWDIAPHLRSLDSPGVMVSRKENSPLYTVNRHKTEGYALDW-SP 16028
Query: 188 LSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVAD 247
LLS + + + L + G G D+ F H+A VED+ W +++F S +
Sbjct: 16029 FEYSLLSGDNANEIFLTKYSNG---GWQTDSSP-FLSHTAAVEDLQWSPSEKNVFSSCSC 16196
Query: 248 DQKLMIWDTRSNTTSKPSHLVDAHTA-EVNCLSFNPYSEFILATGSADKTVALWDLRNLK 306
D IWD R N + V+AH +VN LS+N +LATG+ + ++WDLR+LK
Sbjct: 16197 DGTFRIWDVR-NKQKTSALTVNAHPGVDVNVLSWNTRVPNLLATGADNGVWSVWDLRSLK 16373
Query: 307 LK------LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQ----SA 355
+ +F+ H+ I+ + W P+ ++++ G D ++++WDLS ++ EE+ +A
Sbjct: 16374 SSSSVATPVASFKWHRAPIYSIEWHPNEDSVIGVVGADNQISLWDLSVELDEEEQDSRAA 16553
Query: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
E +D PP+L+FIH G +I + W+ P I S + I
Sbjct: 16554 EGLQDVPPQLMFIHMGQ-QEIKEMHWHRQIPGTIVSTAMTGI 16676
Score = 57.8 bits (138), Expect = 2e-06
Identities = 53/183 (28%), Positives = 81/183 (43%), Gaps = 3/183 (1%)
Frame = +1
Query: 166 CNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGH 225
CN H + L W S LLS S D T + D+ ++ +A + F
Sbjct: 34141 CNCVKSFTYHSDKVSCLDWYSKAPSVLLSGSYDKTAKIADL-------RLEEAPSSFQVT 34299
Query: 226 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSE 285
S V E+VAW E+ F D+ + D R+ SK + AH ++CLS NP
Sbjct: 34300 SDV-ENVAWDQHSENNFFIGTDNGIVYYCDARN--LSKSVWQLQAHDGPISCLSVNPSVP 34470
Query: 286 FILATGSADKTVALWDLRNLKLKL-HTFESHKDEIFQVHWSPHNETI--LASSGTDRRLN 342
+ATGS D+ V LW+ + K+ + + +F ++ T LA+SG+ +
Sbjct: 34471 SFVATGSTDRVVKLWNTSDSSPKMVVSRDLDVGRVFTCSFTTDESTAFHLAASGSKGVVR 34650
Query: 343 VWD 345
VWD
Sbjct: 34651 VWD 34659
Score = 53.9 bits (128), Expect = 3e-05
Identities = 51/234 (21%), Positives = 96/234 (40%), Gaps = 2/234 (0%)
Frame = +1
Query: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 234
H LS N N L+S S D T+ LWD++ + FT HS V + W
Sbjct: 34039 HTDAVLALSSNRNAHNLLVSGSADTTLKLWDLST-------CNCVKSFTYHSDKVSCLDW 34197
Query: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
+ S+ S + D+ I D R + T++V ++++ +SE G+ +
Sbjct: 34198 YSKAPSVLLSGSYDKTAKIADLRLEEAPSSFQV----TSDVENVAWDQHSENNFFIGTDN 34365
Query: 295 KTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 354
V D RNL + ++H I + +P + +A+ TDR + +W+ S
Sbjct: 34366 GIVYYCDARNLSKSVWQLQAHDGPISCLSVNPSVPSFVATGSTDRVVKLWNTS------- 34524
Query: 355 AEDAEDGPPELLFIHGGHTAKISDFSWNPNE--PWVICSVSEDNIMQIWQMAEN 406
D P+++ ++ S+ +E + + + ++++W A N
Sbjct: 34525 -----DSSPKMVVSRDLDVGRVFTCSFTTDESTAFHLAASGSKGVVRVWDTATN 34671
>gb|BC008121.1|BC008121 Mus musculus, Similar to glutamate rich WD repeat protein GRWD,
clone IMAGE:3498842, mRNA, partial cds
Length = 1907
Score = 123 bits (308), Expect = 4e-26
Identities = 99/356 (27%), Positives = 156/356 (43%), Gaps = 26/356 (7%)
Frame = +1
Query: 64 WLVLGTHTSDEQ-NHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK-IN 121
+L GT Q N L++ R+H + + D D+ + K + E+ +
Sbjct: 247 YLCAGTQAESAQSNRLMMLRMHNLHGTRPSPSEGSDDDEEDEDEEDEEEQKPQLELAMVP 426
Query: 122 HEGEVNRAR--YMPQNPHIIATKTPSSDVLVFDYTK------HPAK-----PDPSGECNP 168
H G +NR R ++ + P + + V VF + P D P
Sbjct: 427 HYGGINRVRVSWLGEEP-VAGVWSEKGQVEVFALRRLLQVVDDPQALAIFLRDEQARIKP 603
Query: 169 DLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAIFTGHS 226
GH EG+ L W+ + G LL+ V LW P EG VD + F GH+
Sbjct: 604 IFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNVHLWT----PTEGGSWNVDQRP-FVGHT 768
Query: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDA--HTAEVNCLSFNPYS 284
VED+ W +++F S + D + IWD R+ K L A H +VN +S++
Sbjct: 769 RSVEDLQWSPTEDTVFASCSADASIRIWDIRA-APGKACMLTTATAHDGDVNVISWSRRE 945
Query: 285 EFILATGSADKTVALWDLRNLKL--KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
F+L+ G D + +WDLR K + TF+ H + V W P + + A+SG D ++
Sbjct: 946 PFLLSGGD-DGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQIT 1122
Query: 343 VWDLSKIGEEQSAEDAEDG-----PPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
WDL+ + +S E D P +LLF+H G T + + W+P P V+ S +
Sbjct: 1123QWDLAVERDPESGETETDPGLAALPQQLLFVHQGET-DLKELHWHPQCPGVLISTA 1287
Score = 43.1 bits (100), Expect = 0.048
Identities = 25/95 (26%), Positives = 44/95 (46%)
Frame = +1
Query: 309 LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI 368
+ +F H E F + WSP L + + +++W ++ G + + + P F+
Sbjct: 604 IFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEGG----SWNVDQRP----FV 759
Query: 369 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
GHT + D W+P E V S S D ++IW +
Sbjct: 760 --GHTRSVEDLQWSPTEDTVFASCSADASIRIWDI 858
>gb|AF337808.1|AF337808 Homo sapiens glutamate rich WD repeat protein (GRWD) mRNA, complete
cds
Length = 2240
Score = 123 bits (308), Expect = 4e-26
Identities = 96/356 (26%), Positives = 160/356 (43%), Gaps = 26/356 (7%)
Frame = +1
Query: 64 WLVLGTHTSDEQ-NHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK-IN 121
+L GT Q N L++ R+H + + D ++ E K + E+ +
Sbjct: 274 YLCAGTQAESAQSNRLMMLRMHNLHGTKPPPSEGSDEEEEEEDEEDEEERKPQLELAMVP 453
Query: 122 HEGEVNRAR--YMPQNPHIIATKTPSSDVLVF------DYTKHPAK-----PDPSGECNP 168
H G +NR R ++ + P + + V VF + P D + P
Sbjct: 454 HYGGINRVRVSWLGEEP-VAGVWSEKGQVEVFALRRLLQVVEEPQALAAFLRDEQAQMKP 630
Query: 169 DLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAIFTGHS 226
GH EG+ L W+ ++G LL+ + LW P +G VD + F GH+
Sbjct: 631 IFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWT----PTDGGSWHVDQRP-FVGHT 795
Query: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDA--HTAEVNCLSFNPYS 284
VED+ W ++F S + D + IWD R+ SK L A H +VN +S++
Sbjct: 796 RSVEDLQWSPTENTVFASCSADASIRIWDIRA-APSKACMLTTATAHDGDVNVISWSRRE 972
Query: 285 EFILATGSADKTVALWDLRNLKL--KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
F+L+ G D + +WDLR K + TF+ H + V W P + + A+SG D ++
Sbjct: 973 PFLLSGGD-DGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQIT 1149
Query: 343 VWDLS-----KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
WDL+ + G+ ++ D P +LLF+H G T ++ + W+P P ++ S +
Sbjct: 1150QWDLAVERDPEAGDVEADPGLADLPQQLLFVHQGET-ELKELHWHPQCPGLLVSTA 1314
Score = 41.6 bits (96), Expect = 0.14
Identities = 25/95 (26%), Positives = 40/95 (41%)
Frame = +1
Query: 309 LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI 368
+ +F H E F + WSP L + + +++W + G D P +
Sbjct: 631 IFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHV-----DQRPFV--- 786
Query: 369 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
GHT + D W+P E V S S D ++IW +
Sbjct: 787 --GHTRSVEDLQWSPTENTVFASCSADASIRIWDI 885
>ref|NM_031485.1| Homo sapiens glutamate rich WD repeat protein GRWD (GRWD), mRNA
Length = 2262
Score = 123 bits (308), Expect = 4e-26
Identities = 96/356 (26%), Positives = 160/356 (43%), Gaps = 26/356 (7%)
Frame = +3
Query: 64 WLVLGTHTSDEQ-NHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK-IN 121
+L GT Q N L++ R+H + + D ++ E K + E+ +
Sbjct: 279 YLCAGTQAESAQSNRLMMLRMHNLHGTKPPPSEGSDEEEEEEDEEDEEERKPQLELAMVP 458
Query: 122 HEGEVNRAR--YMPQNPHIIATKTPSSDVLVF------DYTKHPAK-----PDPSGECNP 168
H G +NR R ++ + P + + V VF + P D + P
Sbjct: 459 HYGGINRVRVSWLGEEP-VAGVWSEKGQVEVFALRRLLQVVEEPQALAAFLRDEQAQMKP 635
Query: 169 DLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAIFTGHS 226
GH EG+ L W+ ++G LL+ + LW P +G VD + F GH+
Sbjct: 636 IFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWT----PTDGGSWHVDQRP-FVGHT 800
Query: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDA--HTAEVNCLSFNPYS 284
VED+ W ++F S + D + IWD R+ SK L A H +VN +S++
Sbjct: 801 RSVEDLQWSPTENTVFASCSADASIRIWDIRA-APSKACMLTTATAHDGDVNVISWSRRE 977
Query: 285 EFILATGSADKTVALWDLRNLKL--KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
F+L+ G D + +WDLR K + TF+ H + V W P + + A+SG D ++
Sbjct: 978 PFLLSGGD-DGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQIT 1154
Query: 343 VWDLS-----KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
WDL+ + G+ ++ D P +LLF+H G T ++ + W+P P ++ S +
Sbjct: 1155QWDLAVERDPEAGDVEADPGLADLPQQLLFVHQGET-ELKELHWHPQCPGLLVSTA 1319
Score = 41.6 bits (96), Expect = 0.14
Identities = 25/95 (26%), Positives = 40/95 (41%)
Frame = +3
Query: 309 LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI 368
+ +F H E F + WSP L + + +++W + G D P +
Sbjct: 636 IFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHV-----DQRPFV--- 791
Query: 369 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
GHT + D W+P E V S S D ++IW +
Sbjct: 792 --GHTRSVEDLQWSPTENTVFASCSADASIRIWDI 890
>gb|BC002440.1|BC002440 Homo sapiens, Similar to CG12792 gene product, clone MGC:2600
IMAGE:3347366, mRNA, complete cds
Length = 2262
Score = 123 bits (308), Expect = 4e-26
Identities = 96/356 (26%), Positives = 160/356 (43%), Gaps = 26/356 (7%)
Frame = +3
Query: 64 WLVLGTHTSDEQ-NHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK-IN 121
+L GT Q N L++ R+H + + D ++ E K + E+ +
Sbjct: 279 YLCAGTQAESAQSNRLMMLRMHNLHGTKPPPSEGSDEEEEEEDEEDEEERKPQLELAMVP 458
Query: 122 HEGEVNRAR--YMPQNPHIIATKTPSSDVLVF------DYTKHPAK-----PDPSGECNP 168
H G +NR R ++ + P + + V VF + P D + P
Sbjct: 459 HYGGINRVRVSWLGEEP-VAGVWSEKGQVEVFALRRLLQVVEEPQALAAFLRDEQAQMKP 635
Query: 169 DLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAIFTGHS 226
GH EG+ L W+ ++G LL+ + LW P +G VD + F GH+
Sbjct: 636 IFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWT----PTDGGSWHVDQRP-FVGHT 800
Query: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDA--HTAEVNCLSFNPYS 284
VED+ W ++F S + D + IWD R+ SK L A H +VN +S++
Sbjct: 801 RSVEDLQWSPTENTVFASCSADASIRIWDIRA-APSKACMLTTATAHDGDVNVISWSRRE 977
Query: 285 EFILATGSADKTVALWDLRNLKL--KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
F+L+ G D + +WDLR K + TF+ H + V W P + + A+SG D ++
Sbjct: 978 PFLLSGGD-DGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQIT 1154
Query: 343 VWDLS-----KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
WDL+ + G+ ++ D P +LLF+H G T ++ + W+P P ++ S +
Sbjct: 1155QWDLAVERDPEAGDVEADPGLADLPQQLLFVHQGET-ELKELHWHPQCPGLLVSTA 1319
Score = 41.6 bits (96), Expect = 0.14
Identities = 25/95 (26%), Positives = 40/95 (41%)
Frame = +3
Query: 309 LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI 368
+ +F H E F + WSP L + + +++W + G D P +
Sbjct: 636 IFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHV-----DQRPFV--- 791
Query: 369 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
GHT + D W+P E V S S D ++IW +
Sbjct: 792 --GHTRSVEDLQWSPTENTVFASCSADASIRIWDI 890
>dbj|D30014.1|RICEN20522 Rice mRNA EN205, partial sequence
Length = 335
Score = 90.1 bits (222), Expect(2) = 8e-25
Identities = 43/63 (68%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = +2
Query: 343 VWDLSKIGEEQSAED-AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
VWDLSK+ S AEDGPPELL IHGGHT+KISDFSWNP E +I S +EDNI+QIW
Sbjct: 104 VWDLSKVFPSNSHRSTAEDGPPELLSIHGGHTSKISDFSWNPCEALLIASFAEDNILQIW 283
Query: 402 QMA 404
Q+A
Sbjct: 284 QLA 292
Score = 49.7 bits (117), Expect(2) = 8e-25
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +1
Query: 309 LHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
LHTF+ HK+E FQV WSP NETILAS RRL
Sbjct: 1 LHTFDCHKEEAFQVGWSPKNETILASCCLGRRL 99
>ref|NM_065690.1| Caenorhabditis elegans
Length = 1362
Score = 114 bits (285), Expect = 2e-23
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 3/225 (1%)
Frame = +1
Query: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
G KEGYGL+W+S +G L + + LW + G G+ TGH VED+A
Sbjct: 676 GSGKEGYGLAWSSLKTGDLATGDIIKKIYLWQMKEG---GQWAVGANPLTGHKKSVEDLA 846
Query: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVD-AHTAEVNCLSFNPYSEFILATGS 292
W L S + D + +WDTRS V AH ++VN +S+N + E ++ +G
Sbjct: 847 WSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRH-ENLIVSGG 1023
Query: 293 ADKTVALWDLRNLKL--KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
D + +W L+ ++ + F+ H I V W PH T +SG D + +WD++
Sbjct: 1024DDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWDIATEA 1203
Query: 351 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
+ Q+ + E PP+L+F+H G ++ + W+ P + + S D
Sbjct: 1204DGQT--NIEGVPPQLMFVHMGQN-EVKEVHWHQQIPGLAINTSID 1329
Score = 68.9 bits (167), Expect = 8e-10
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Frame = +1
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
L GH+K L+W+ +G L S S D ++ LWD + PK+ + + H + V
Sbjct: 811 LTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQK---AHESDVNV 981
Query: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
++W+ HE+L S DD +L IW ++ +P L H + + + ++P+
Sbjct: 982 ISWNR-HENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMAS 1158
Query: 292 SADKTVALWD----------LRNLKLKLHTFESHKDEIFQVHW 324
D +WD + + +L ++E+ +VHW
Sbjct: 1159GEDDQTTIWDIATEADGQTNIEGVPPQLMFVHMGQNEVKEVHW 1287
>emb|Z48622.1|SC9553 S.cerevisiae chromosome XIII cosmid 9553
Length = 16279
Score = 112 bits (279), Expect = 8e-23
Identities = 100/410 (24%), Positives = 178/410 (43%), Gaps = 35/410 (8%)
Frame = -1
Query: 28 PFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD--EQNHLVV----- 80
P +Y+++ + WP LT+ +P+ E ++Y L+ S ++N L+V
Sbjct: 15475 PTVYEMLHNVNMPWPCLTLDVIPDTLGSERRNYPQSILLTTATQSSRKKENELMVLALSN 15296
Query: 81 -ARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMP---QNP 136
A+ + +D+ D D D V IE E I NR + P N
Sbjct: 15295 LAKTLLKDDNEGEDDEEDDED--------DVDPVIENE-NIPLRDTTNRLKVSPFAISNQ 15143
Query: 137 HII-ATKTPSSDVLVFDYTKH------PAKPDPSGECNPDLRLRGHQK-EGYGLSWNSNL 188
++ AT + + DV +++ P P P ++ H EGYGL W+ +
Sbjct: 15142 EVLTATMSENGDVYIYNLAPQSKAFSTPGYQIPKSAKRPIHTVKNHGNVEGYGLDWSPLI 14963
Query: 189 SGHLLSASDDHTVCLWDINAGPKEGK--IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVA 246
L + D C I + + D + ++ +ED+ W ++F +
Sbjct: 14962 KTGALLSGD----CSGQIYFTQRHTSRWVTDKQPFTVSNNKSIEDIQWSRTESTVFATAG 14795
Query: 247 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 306
D + IWDTRS KP+ V A +VN +S++ ++LA+G + T +WDLR
Sbjct: 14794 CDGYIRIWDTRSK-KHKPAISVKASNTDVNVISWSDKIGYLLASGDDNGTWGVWDLRQFT 14618
Query: 307 -------LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE-----EQS 354
+ ++ HK I + ++P +E+I+A D + +WDLS + +Q+
Sbjct: 14617 PSNADAVQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNTVTLWDLSVEADDEEIKQQA 14438
Query: 355 AE--DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
AE + ++ PP+LLF+H ++ D W+ P + S D + +W+
Sbjct: 14437 AETKELQEIPPQLLFVH--WQKEVKDVKWHKQIPGCLVSTGTDG-LNVWK 14297
>gb|M21696.1|YSCPPG S.cerevisiae phosphoglucoisomerase 1 (PGI1) gene, complete cds
Length = 3791
Score = 101 bits (252), Expect = 1e-19
Identities = 74/261 (28%), Positives = 116/261 (44%), Gaps = 26/261 (9%)
Frame = +3
Query: 16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-- 73
+ E Y WKKNT LYD + T++ +WPSLT Q+ P++ + H ++L + TS
Sbjct: 3006 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDE----HRILLSSFTSSQK 3173
Query: 74 -EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSV---TGKIECEIKINH-EGEVNR 128
E + ++++ ++ D D+ EF S + + +I I GE NR
Sbjct: 3174 PEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNR 3353
Query: 129 ARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNP--DLRLRGHQ---------- 176
ARY+PQNP IIA + + +FD TKH + + + + +L G
Sbjct: 3354 ARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMD 3533
Query: 177 ------KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAI-FTGHSAVV 229
E L+WN LLS+ + V LWDI E I+D + V
Sbjct: 3534 TSSADINEATSLAWNLQQEALLLSSHSNGQVQLWDIKQYSHENPIIDLPLVSINSDGTAV 3713
Query: 230 EDVAWHLLHESLFGSVADDQK 250
DV W H+SLF + ++ +
Sbjct: 3714 NDVTWMPTHDSLFAACTEEMR 3776
>emb|AJ009770.1|HSA9770 Homo sapiens mRNA for putative transcription factor, partial
Length = 1981
Score = 95.5 bits (236), Expect = 8e-18
Identities = 76/251 (30%), Positives = 122/251 (48%)
Frame = +1
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
LRGH Y + ++ SG LLS S+D ++ WD+ + ++ GH+ V D
Sbjct: 25 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNT-------VLYQGHAYPVWD 180
Query: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
+ + F S + D+ +W S + P + H A+V+C+ F+P S + LATG
Sbjct: 181 LDISP-YSLYFASGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATG 345
Query: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 351
S DKTV LW + + F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 346 STDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLAS--- 510
Query: 352 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 411
L GHT I+ +++P + +I S S DN +++W + N Y
Sbjct: 511 -----------GTLYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDI-RNTYCSA 651
Query: 412 ESDVTASELEG 422
+D ++SEL G
Sbjct: 652 PADGSSSELVG 684
>ref|XM_050783.1| Homo sapiens similar to TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor, 65
kD (H. sapiens) (LOC146638), mRNA
Length = 1050
Score = 95.5 bits (236), Expect = 8e-18
Identities = 76/251 (30%), Positives = 122/251 (48%)
Frame = +1
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
LRGH Y + ++ SG LLS S+D ++ WD+ + ++ GH+ V D
Sbjct: 25 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNT-------VLYQGHAYPVWD 180
Query: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
+ + F S + D+ +W S + P + H A+V+C+ F+P S + LATG
Sbjct: 181 LDISP-YSLYFASGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATG 345
Query: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 351
S DKTV LW + + F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 346 STDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLAS--- 510
Query: 352 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 411
L GHT I+ +++P + +I S S DN +++W + N Y
Sbjct: 511 -----------GTLYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDI-RNTYCSA 651
Query: 412 ESDVTASELEG 422
+D ++SEL G
Sbjct: 652 PADGSSSELVG 684
>ref|XM_001872.3| Homo sapiens TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor, 65 kD (TAF5L), mRNA
Length = 1959
Score = 95.5 bits (236), Expect = 8e-18
Identities = 76/251 (30%), Positives = 122/251 (48%)
Frame = +1
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
LRGH Y + ++ SG LLS S+D ++ WD+ + ++ GH+ V D
Sbjct: 25 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNT-------VLYQGHAYPVWD 180
Query: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
+ + F S + D+ +W S + P + H A+V+C+ F+P S + LATG
Sbjct: 181 LDISP-YSLYFASGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATG 345
Query: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 351
S DKTV LW + + F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 346 STDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLAS--- 510
Query: 352 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 411
L GHT I+ +++P + +I S S DN +++W + N Y
Sbjct: 511 -----------GTLYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDI-RNTYCSA 651
Query: 412 ESDVTASELEG 422
+D ++SEL G
Sbjct: 652 PADGSSSELVG 684
>ref|NM_014409.1| Homo sapiens TAF5-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65 kD (TAF5L), mRNA
Length = 1770
Score = 95.5 bits (236), Expect = 8e-18
Identities = 76/251 (30%), Positives = 122/251 (48%)
Frame = +1
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
LRGH Y + ++ SG LLS S+D ++ WD+ + ++ GH+ V D
Sbjct: 1012 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNT-------VLYQGHAYPVWD 1167
Query: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
+ + F S + D+ +W S + P + H A+V+C+ F+P S + LATG
Sbjct: 1168 LDISP-YSLYFASGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATG 1332
Query: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 351
S DKTV LW + + F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 1333 STDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLAS--- 1497
Query: 352 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 411
L GHT I+ +++P + +I S S DN +++W + N Y
Sbjct: 1498 -----------GTLYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDI-RNTYCSA 1638
Query: 412 ESDVTASELEG 422
+D ++SEL G
Sbjct: 1639 PADGSSSELVG 1671
>gb|AF069736.1|AF069736 Homo sapiens PCAF associated factor 65 beta mRNA, complete cds
Length = 1770
Score = 95.5 bits (236), Expect = 8e-18
Identities = 76/251 (30%), Positives = 122/251 (48%)
Frame = +1
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
LRGH Y + ++ SG LLS S+D ++ WD+ + ++ GH+ V D
Sbjct: 1012 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNT-------VLYQGHAYPVWD 1167
Query: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
+ + F S + D+ +W S + P + H A+V+C+ F+P S + LATG
Sbjct: 1168 LDISP-YSLYFASGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATG 1332
Query: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 351
S DKTV LW + + F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 1333 STDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLAS--- 1497
Query: 352 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 411
L GHT I+ +++P + +I S S DN +++W + N Y
Sbjct: 1498 -----------GTLYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDI-RNTYCSA 1638
Query: 412 ESDVTASELEG 422
+D ++SEL G
Sbjct: 1639 PADGSSSELVG 1671
>ref|NM_102666.1| peroxisomal targeting signal type 2 receptor
Length = 1184
Score = 94.7 bits (234), Expect = 1e-17
Identities = 67/245 (27%), Positives = 108/245 (43%)
Frame = +2
Query: 158 AKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVD 217
A P PS NP + H +E + +N L++S D TV LW ++
Sbjct: 320 ALPPPS---NPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPA------- 469
Query: 218 AKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNC 277
+ F H+ V W+ H +F S + D L IWD R ++ ++ AH E+
Sbjct: 470 SVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTM---IIPAHDFEILS 640
Query: 278 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT 337
+N Y + ILAT S DKTV +WD+R+ ++ L H + +V +SPH +++AS
Sbjct: 641 CDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSY 820
Query: 338 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
D + +WD EDA L+ + HT + ++ S D +
Sbjct: 821 DMSVCLWD-------YMVEDA------LVGRYDHHTEFAVGIDMSVLVEGLMASTGWDEL 961
Query: 398 MQIWQ 402
+ +WQ
Sbjct: 962 VYVWQ 976
Score = 75.9 bits (185), Expect = 7e-12
Identities = 45/175 (25%), Positives = 74/175 (41%)
Frame = +2
Query: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFIL 288
V DV W H+S+ + D + I+DT S P H EV + +NP
Sbjct: 236 VYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSF 415
Query: 289 ATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
T S D TV LW + + + TF+ H ++Q W+P + + AS+ D L +WD+ +
Sbjct: 416 LTSSWDDTVKLWAM-DRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVRE 592
Query: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
P I H +I WN + ++ + S D +++W +
Sbjct: 593 --------------PGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDV 715
>gb|AF130973.1|AF130973 Arabidopsis thaliana peroxisomal targeting signal type 2 receptor
(PEX7) mRNA, complete cds
Length = 1184
Score = 94.7 bits (234), Expect = 1e-17
Identities = 67/245 (27%), Positives = 108/245 (43%)
Frame = +2
Query: 158 AKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVD 217
A P PS NP + H +E + +N L++S D TV LW ++
Sbjct: 320 ALPPPS---NPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPA------- 469
Query: 218 AKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNC 277
+ F H+ V W+ H +F S + D L IWD R ++ ++ AH E+
Sbjct: 470 SVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTM---IIPAHDFEILS 640
Query: 278 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT 337
+N Y + ILAT S DKTV +WD+R+ ++ L H + +V +SPH +++AS
Sbjct: 641 CDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSY 820
Query: 338 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
D + +WD EDA L+ + HT + ++ S D +
Sbjct: 821 DMSVCLWD-------YMVEDA------LVGRYDHHTEFAVGIDMSVLVEGLMASTGWDEL 961
Query: 398 MQIWQ 402
+ +WQ
Sbjct: 962 VYVWQ 976
Score = 75.5 bits (184), Expect = 9e-12
Identities = 45/175 (25%), Positives = 74/175 (41%)
Frame = +2
Query: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFIL 288
V DV W H+S+ + D + I+DT S P H EV + +NP
Sbjct: 236 VYDVCWSESHDSVLIAANGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSF 415
Query: 289 ATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
T S D TV LW + + + TF+ H ++Q W+P + + AS+ D L +WD+ +
Sbjct: 416 LTSSWDDTVKLWAM-DRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVRE 592
Query: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
P I H +I WN + ++ + S D +++W +
Sbjct: 593 --------------PGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDV 715
>gb|AC021043.4|AC021043 Arabidopsis thaliana chromosome I BAC F28N24 genomic sequence, complete
sequence
Length = 154716
Score = 94.7 bits (234), Expect = 1e-17
Identities = 67/245 (27%), Positives = 108/245 (43%)
Frame = -3
Query: 158 AKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVD 217
A P PS NP + H +E + +N L++S D TV LW ++
Sbjct: 38197 ALPPPS---NPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPA------- 38048
Query: 218 AKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNC 277
+ F H+ V W+ H +F S + D L IWD R ++ ++ AH E+
Sbjct: 38047 SVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTM---IIPAHDFEILS 37877
Query: 278 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT 337
+N Y + ILAT S DKTV +WD+R+ ++ L H + +V +SPH +++AS
Sbjct: 37876 CDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSY 37697
Query: 338 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
D + +WD EDA L+ + HT + ++ S D +
Sbjct: 37696 DMSVCLWD-------YMVEDA------LVGRYDHHTEFAVGIDMSVLVEGLMASTGWDEL 37556
Query: 398 MQIWQ 402
+ +WQ
Sbjct: 37555 VYVWQ 37541
Score = 75.9 bits (185), Expect = 7e-12
Identities = 45/175 (25%), Positives = 74/175 (41%)
Frame = -3
Query: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFIL 288
V DV W H+S+ + D + I+DT S P H EV + +NP
Sbjct: 38281 VYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSF 38102
Query: 289 ATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
T S D TV LW + + + TF+ H ++Q W+P + + AS+ D L +WD+ +
Sbjct: 38101 LTSSWDDTVKLWAM-DRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVRE 37925
Query: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
P I H +I WN + ++ + S D +++W +
Sbjct: 37924 --------------PGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDV 37802
>gb|BC013550.1|BC013550 Mus musculus, Similar to PCAF associated factor 65 beta, clone
MGC:19341 IMAGE:4222283, mRNA, complete cds
Length = 2900
Score = 92.8 bits (229), Expect = 5e-17
Identities = 77/252 (30%), Positives = 122/252 (47%), Gaps = 1/252 (0%)
Frame = +2
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
LRGH Y + ++ SG LLS S+D ++ WD+ + ++ GH+ V D
Sbjct: 1136 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNT-------VLYQGHAYPVWD 1291
Query: 232 VAWHLLHESL-FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
V + SL F S + D+ +W S + P + H A+V+C+ F+P S + LAT
Sbjct: 1292 V--DISPFSLYFASGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LAT 1453
Query: 291 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
GS DKTV LW + + F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 1454 GSTDKTVRLWSAQQGN-SVRLFTGHRGPVLSLSFSP-NGKYLASAGEDQRLKLWDLAS-- 1621
Query: 351 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYND 410
L GHT I+ +++P + +I S S DN +++W + N
Sbjct: 1622 ------------GTLFKELRGHTDSITSLAFSP-DSGLIASASMDNSVRVWDIRSTCCN- 1759
Query: 411 EESDVTASELEG 422
+D ++ EL G
Sbjct: 1760 TPADGSSGELVG 1795
>gb|AF430070.1|AF430070 Gossypium hirsutum peroxisomal targeting signal 2 receptor mRNA,
complete cds
Length = 1314
Score = 92.4 bits (228), Expect = 7e-17
Identities = 51/184 (27%), Positives = 87/184 (46%)
Frame = +3
Query: 162 PSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAI 221
P NP L+ H +E +GL +N LSAS D +V LW ++ +
Sbjct: 351 PPPHSNPLRSLKEHAREVHGLDYNPTRRDSFLSASLDDSVKLWTLDRPA-------SLRT 509
Query: 222 FTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFN 281
F H+ V VAW+ H +F S + D + IWD R ++ ++ H E+ +N
Sbjct: 510 FREHAYCVYSVAWNPKHADVFASASGDCTVRIWDVREPGSTM---IIPGHEHEILSCDWN 680
Query: 282 PYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
E ++A+ S DK++ +WD+RN ++ + H + + +SPH ++ S D +
Sbjct: 681 KCDECLIASASVDKSIKIWDVRNYRVPVSVLNGHGYAVRKFKFSPHRRNLIVSCSYDMTV 860
Query: 342 NVWD 345
+WD
Sbjct: 861 CLWD 872
Score = 81.6 bits (200), Expect = 1e-13
Identities = 49/175 (28%), Positives = 77/175 (44%)
Frame = +3
Query: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFIL 288
V DVAW H+S+ + D + ++DT S P + H EV+ L +NP
Sbjct: 264 VYDVAWSESHDSVLVAAVADGSIKVYDTAPPPHSNPLRSLKEHAREVHGLDYNPTRRDSF 443
Query: 289 ATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
+ S D +V LW L + L TF H ++ V W+P + + AS+ D + +WD+ +
Sbjct: 444 LSASLDDSVKLWTL-DRPASLRTFREHAYCVYSVAWNPKHADVFASASGDCTVRIWDVRE 620
Query: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
P I GH +I WN + +I S S D ++IW +
Sbjct: 621 --------------PGSTMIIPGHEHEILSCDWNKCDECLIASASVDKSIKIWDV 743
Score = 70.9 bits (172), Expect = 2e-10
Identities = 46/172 (26%), Positives = 75/172 (42%)
Frame = +3
Query: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 232
R H Y ++WN + SAS D TV +WD+ + I GH +
Sbjct: 513 REHAYCVYSVAWNPKHADVFASASGDCTVRIWDVREP-------GSTMIIPGHEHEILSC 671
Query: 233 AWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGS 292
W+ E L S + D+ + IWD R+ P +++ H V F+P+ ++ + S
Sbjct: 672 DWNKCDECLIASASVDKSIKIWDVRNYRV--PVSVLNGHGYAVRKFKFSPHRRNLIVSCS 845
Query: 293 ADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 344
D TV LWD + ++ H + V S + ++AS+G D + VW
Sbjct: 846 YDMTVCLWDFMIEDALVGRYDHHTEFAVGVDLSVLVDGLMASTGWDELVYVW 1001
>gb|BC006268.1|BC006268 Homo sapiens, peroxisomal biogenesis factor 7, clone MGC:10385
IMAGE:3948721, mRNA, complete cds
Length = 1113
Score = 91.7 bits (226), Expect = 1e-16
Identities = 71/271 (26%), Positives = 115/271 (42%), Gaps = 1/271 (0%)
Frame = +3
Query: 135 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL- 193
N H++ T + + ++D K P + H +E Y + W+ L+
Sbjct: 279 NEHVLITCSGDGSLQLWDTAK---------AAGPLQVYKEHAQEVYSVDWSQTRGEQLVV 431
Query: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
S S D TV LWD P GK + F GH +++ W F S + DQ L I
Sbjct: 432 SGSWDQTVKLWD----PTVGKSL---CTFRGHESIIYSTIWSPHIPGCFASASGDQTLRI 590
Query: 254 WDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFE 313
WD ++ + ++ AH AE+ + Y+E +L TG+ D ++ WDLRN++ +
Sbjct: 591 WDVKA---AGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELL 761
Query: 314 SHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT 373
H I +V +SP + ++LAS D + W+ SK P LL HT
Sbjct: 762 GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK-------------PDSLLETVEHHT 902
Query: 374 AKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
++ P + S D ++I+ A
Sbjct: 903 EFTCGLDFSLQSPTQVADCSWDETIKIYDPA 995
Score = 65.5 bits (158), Expect = 9e-09
Identities = 51/183 (27%), Positives = 82/183 (43%), Gaps = 4/183 (2%)
Frame = +3
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDH---TVCLWDINAGPKEGKIVDAKAIFTGHSAV 228
LR + GY ++ L G L A+ H C + P E + ++ F + +
Sbjct: 78 LRTPGRHGYAAEFSPYLPGRLACATAQHYGIAGCGTLLILDPDEAGLRLFRS-FDWNDGL 254
Query: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFN-PYSEFI 287
DV W +E + + + D L +WDT + P + H EV + ++ E +
Sbjct: 255 F-DVTWSENNEHVLITCSGDGSLQLWDTAK--AAGPLQVYKEHAQEVYSVDWSQTRGEQL 425
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
+ +GS D+TV LWD + L TF H+ I+ WSPH AS+ D+ L +WD+
Sbjct: 426 VVSGSWDQTVKLWD-PTVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVK 602
Query: 348 KIG 350
G
Sbjct: 603 AAG 611
Score = 54.7 bits (130), Expect = 2e-05
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Frame = +3
Query: 278 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWS-PHNETILASSG 336
++++ +E +L T S D ++ LWD L ++ H E++ V WS E ++ S
Sbjct: 261 VTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGS 440
Query: 337 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 396
D+ + +WD +G+ L GH + I W+P+ P S S D
Sbjct: 441 WDQTVKLWD-PTVGKS-------------LCTFRGHESIIYSTIWSPHIPGCFASASGDQ 578
Query: 397 IMQIWQM 403
++IW +
Sbjct: 579 TLRIWDV 599
>gb|U76560.1|HSU76560 Human peroxisome targeting signal 2 receptor (Pex7) mRNA, complete
cds
Length = 1434
Score = 91.7 bits (226), Expect = 1e-16
Identities = 71/271 (26%), Positives = 115/271 (42%), Gaps = 1/271 (0%)
Frame = +1
Query: 135 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL- 193
N H++ T + + ++D K P + H +E Y + W+ L+
Sbjct: 283 NEHVLITCSGDGSLQLWDTAK---------AAGPLQVYKEHAQEVYSVDWSQTRGEQLVV 435
Query: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
S S D TV LWD P GK + F GH +++ W F S + DQ L I
Sbjct: 436 SGSWDQTVKLWD----PTVGKSL---CTFRGHESIIYSTIWSPHIPGCFASASGDQTLRI 594
Query: 254 WDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFE 313
WD ++ + ++ AH AE+ + Y+E +L TG+ D ++ WDLRN++ +
Sbjct: 595 WDVKA---AGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELL 765
Query: 314 SHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT 373
H I +V +SP + ++LAS D + W+ SK P LL HT
Sbjct: 766 GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK-------------PDSLLETVEHHT 906
Query: 374 AKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
++ P + S D ++I+ A
Sbjct: 907 EFTCGLDFSLQSPTQVADCSWDETIKIYDPA 999
Score = 65.5 bits (158), Expect = 9e-09
Identities = 51/183 (27%), Positives = 82/183 (43%), Gaps = 4/183 (2%)
Frame = +1
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDH---TVCLWDINAGPKEGKIVDAKAIFTGHSAV 228
LR + GY ++ L G L A+ H C + P E + ++ F + +
Sbjct: 82 LRTPGRHGYAAEFSPYLPGRLACATAQHYGIAGCGTLLILDPDEAGLRLFRS-FDWNDGL 258
Query: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFN-PYSEFI 287
DV W +E + + + D L +WDT + P + H EV + ++ E +
Sbjct: 259 F-DVTWSENNEHVLITCSGDGSLQLWDTAK--AAGPLQVYKEHAQEVYSVDWSQTRGEQL 429
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
+ +GS D+TV LWD + L TF H+ I+ WSPH AS+ D+ L +WD+
Sbjct: 430 VVSGSWDQTVKLWD-PTVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVK 606
Query: 348 KIG 350
G
Sbjct: 607 AAG 615
Score = 54.7 bits (130), Expect = 2e-05
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Frame = +1
Query: 278 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWS-PHNETILASSG 336
++++ +E +L T S D ++ LWD L ++ H E++ V WS E ++ S
Sbjct: 265 VTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGS 444
Query: 337 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 396
D+ + +WD +G+ L GH + I W+P+ P S S D
Sbjct: 445 WDQTVKLWD-PTVGKS-------------LCTFRGHESIIYSTIWSPHIPGCFASASGDQ 582
Query: 397 IMQIWQM 403
++IW +
Sbjct: 583 TLRIWDV 603
>ref|NM_000288.1| Homo sapiens peroxisomal biogenesis factor 7 (PEX7), mRNA
Length = 1451
Score = 91.7 bits (226), Expect = 1e-16
Identities = 71/271 (26%), Positives = 115/271 (42%), Gaps = 1/271 (0%)
Frame = +1
Query: 135 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL- 193
N H++ T + + ++D K P + H +E Y + W+ L+
Sbjct: 316 NEHVLITCSGDGSLQLWDTAK---------AAGPLQVYKEHAQEVYSVDWSQTRGEQLVV 468
Query: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
S S D TV LWD P GK + F GH +++ W F S + DQ L I
Sbjct: 469 SGSWDQTVKLWD----PTVGKSL---CTFRGHESIIYSTIWSPHIPGCFASASGDQTLRI 627
Query: 254 WDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFE 313
WD ++ + ++ AH AE+ + Y+E +L TG+ D ++ WDLRN++ +
Sbjct: 628 WDVKA---AGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELL 798
Query: 314 SHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT 373
H I +V +SP + ++LAS D + W+ SK P LL HT
Sbjct: 799 GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK-------------PDSLLETVEHHT 939
Query: 374 AKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
++ P + S D ++I+ A
Sbjct: 940 EFTCGLDFSLQSPTQVADCSWDETIKIYDPA 1032
Score = 65.5 bits (158), Expect = 9e-09
Identities = 51/183 (27%), Positives = 82/183 (43%), Gaps = 4/183 (2%)
Frame = +1
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDH---TVCLWDINAGPKEGKIVDAKAIFTGHSAV 228
LR + GY ++ L G L A+ H C + P E + ++ F + +
Sbjct: 115 LRTPGRHGYAAEFSPYLPGRLACATAQHYGIAGCGTLLILDPDEAGLRLFRS-FDWNDGL 291
Query: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFN-PYSEFI 287
DV W +E + + + D L +WDT + P + H EV + ++ E +
Sbjct: 292 F-DVTWSENNEHVLITCSGDGSLQLWDTAK--AAGPLQVYKEHAQEVYSVDWSQTRGEQL 462
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
+ +GS D+TV LWD + L TF H+ I+ WSPH AS+ D+ L +WD+
Sbjct: 463 VVSGSWDQTVKLWD-PTVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVK 639
Query: 348 KIG 350
G
Sbjct: 640 AAG 648
Score = 54.7 bits (130), Expect = 2e-05
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Frame = +1
Query: 278 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWS-PHNETILASSG 336
++++ +E +L T S D ++ LWD L ++ H E++ V WS E ++ S
Sbjct: 298 VTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGS 477
Query: 337 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 396
D+ + +WD +G+ L GH + I W+P+ P S S D
Sbjct: 478 WDQTVKLWD-PTVGKS-------------LCTFRGHESIIYSTIWSPHIPGCFASASGDQ 615
Query: 397 IMQIWQM 403
++IW +
Sbjct: 616 TLRIWDV 636
>gb|U88871.1|HSU88871 Human HsPex7p (HsPEX7) mRNA, complete cds
Length = 1451
Score = 91.7 bits (226), Expect = 1e-16
Identities = 71/271 (26%), Positives = 115/271 (42%), Gaps = 1/271 (0%)
Frame = +1
Query: 135 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL- 193
N H++ T + + ++D K P + H +E Y + W+ L+
Sbjct: 316 NEHVLITCSGDGSLQLWDTAK---------AAGPLQVYKEHAQEVYSVDWSQTRGEQLVV 468
Query: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
S S D TV LWD P GK + F GH +++ W F S + DQ L I
Sbjct: 469 SGSWDQTVKLWD----PTVGKSL---CTFRGHESIIYSTIWSPHIPGCFASASGDQTLRI 627
Query: 254 WDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFE 313
WD ++ + ++ AH AE+ + Y+E +L TG+ D ++ WDLRN++ +
Sbjct: 628 WDVKA---AGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELL 798
Query: 314 SHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT 373
H I +V +SP + ++LAS D + W+ SK P LL HT
Sbjct: 799 GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK-------------PDSLLETVEHHT 939
Query: 374 AKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
++ P + S D ++I+ A
Sbjct: 940 EFTCGLDFSLQSPTQVADCSWDETIKIYDPA 1032
Score = 65.5 bits (158), Expect = 9e-09
Identities = 51/183 (27%), Positives = 82/183 (43%), Gaps = 4/183 (2%)
Frame = +1
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDH---TVCLWDINAGPKEGKIVDAKAIFTGHSAV 228
LR + GY ++ L G L A+ H C + P E + ++ F + +
Sbjct: 115 LRTPGRHGYAAEFSPYLPGRLACATAQHYGIAGCGTLLILDPDEAGLRLFRS-FDWNDGL 291
Query: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFN-PYSEFI 287
DV W +E + + + D L +WDT + P + H EV + ++ E +
Sbjct: 292 F-DVTWSENNEHVLITCSGDGSLQLWDTAK--AAGPLQVYKEHAQEVYSVDWSQTRGEQL 462
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
+ +GS D+TV LWD + L TF H+ I+ WSPH AS+ D+ L +WD+
Sbjct: 463 VVSGSWDQTVKLWD-PTVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVK 639
Query: 348 KIG 350
G
Sbjct: 640 AAG 648
Score = 54.7 bits (130), Expect = 2e-05
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Frame = +1
Query: 278 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWS-PHNETILASSG 336
++++ +E +L T S D ++ LWD L ++ H E++ V WS E ++ S
Sbjct: 298 VTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGS 477
Query: 337 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 396
D+ + +WD +G+ L GH + I W+P+ P S S D
Sbjct: 478 WDQTVKLWD-PTVGKS-------------LCTFRGHESIIYSTIWSPHIPGCFASASGDQ 615
Query: 397 IMQIWQM 403
++IW +
Sbjct: 616 TLRIWDV 636
>gb|AC024818.1| Caenorhabditis elegans cosmid Y54H5A, complete sequence
Length = 22200
Score = 90.1 bits (222), Expect = 3e-16
Identities = 53/178 (29%), Positives = 89/178 (49%), Gaps = 3/178 (1%)
Frame = +3
Query: 221 IFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVD-AHTAEVNCLS 279
IF S VED+AW L S + D + +WDTRS V AH ++VN +S
Sbjct: 17391 IFQYFSESVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVIS 17570
Query: 280 FNPYSEFILATGSADKTVALWDLRNLKL--KLHTFESHKDEIFQVHWSPHNETILASSGT 337
+N + E ++ +G D + +W L+ ++ + F+ H I V W PH T +SG
Sbjct: 17571 WNRH-ENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGE 17747
Query: 338 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
D + +WD++ + Q+ + E PP+L+F+H G ++ + W+ P + + S D
Sbjct: 17748 DDQTTIWDIATEADGQT--NIEGVPPQLMFVHMGQN-EVKEVHWHQQIPGLAINTSID 17912
Score = 63.2 bits (152), Expect = 5e-08
Identities = 40/181 (22%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Frame = +3
Query: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 241
L+W+ +G L S S D ++ LWD + PK+ + + H + V ++W+ HE+L
Sbjct: 17424 LAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQK---AHESDVNVISWNR-HENL 17591
Query: 242 FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 301
S DD +L IW ++ +P L H + + + ++P+ D +WD
Sbjct: 17592 IVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWD 17771
Query: 302 ----------LRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTD-----RRLNVWDL 346
+ + +L ++E+ +VHW + ++ D + +N+ D+
Sbjct: 17772 IATEADGQTNIEGVPPQLMFVHMGQNEVKEVHWHQQIPGLAINTSIDGFNVFKTINI*DV 17951
Query: 347 S 347
S
Sbjct: 17952 S 17954
Score = 59.3 bits (142), Expect = 7e-07
Identities = 37/133 (27%), Positives = 64/133 (47%), Gaps = 3/133 (2%)
Frame = +3
Query: 275 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF---ESHKDEIFQVHWSPHNETI 331
V L+++P +LA+ SAD ++ LWD R+ ++H+ ++ + W+ H E +
Sbjct: 17415 VEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRH-ENL 17591
Query: 332 LASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 391
+ S G D L +W L I + G P LF + H + I+ W+P+E +
Sbjct: 17592 IVSGGDDGELKIWSLKTI---------QFGQPVALFKY--HNSPITSVDWHPHETTTFMA 17738
Query: 392 VSEDNIMQIWQMA 404
ED+ IW +A
Sbjct: 17739 SGEDDQTTIWDIA 17777
Score = 37.0 bits (84), Expect = 3.5
Identities = 21/99 (21%), Positives = 43/99 (43%)
Frame = +3
Query: 305 LKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPE 364
L + + F+ + + + WSP +LAS D + +WD ++
Sbjct: 17373 LSIFQYIFQYFSESVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDAC---------- 17522
Query: 365 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
+ + H + ++ SWN +E +I S +D ++IW +
Sbjct: 17523 VCTVQKAHESDVNVISWNRHEN-LIVSGGDDGELKIWSL 17636
>dbj|AP003593.1|AP003593 Nostoc sp. PCC 7120 DNA, complete genome, section 13/19
Length = 333550
Score = 89.0 bits (219), Expect = 8e-16
Identities = 65/213 (30%), Positives = 110/213 (51%)
Frame = +3
Query: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
L S S D TV LWDI++ I GH++ V V ++ S S + DQ +
Sbjct: 66021 LASGSGDQTVRLWDISSSK-------CLYILQGHTSWVNSVVFNP-DGSTLASGSSDQTV 66176
Query: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT 311
+W+ S SK HT+ VN + FNP +LA+GS+DKTV LWD+ + K LHT
Sbjct: 66177 RLWEINS---SKCLCTFQGHTSWVNSVVFNPDGS-MLASGSSDKTVRLWDISSSKC-LHT 66341
Query: 312 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGG 371
F+ H + + V ++P + ++LAS D+ + +W++S + L G
Sbjct: 66342 FQGHTNWVNSVAFNP-DGSMLASGSGDQTVRLWEISS--------------SKCLHTFQG 66476
Query: 372 HTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
HT+ +S +++P + ++ S S+D +++W ++
Sbjct: 66477 HTSWVSSVTFSP-DGTMLASGSDDQTVRLWSIS 66572
Score = 85.5 bits (210), Expect = 9e-15
Identities = 62/212 (29%), Positives = 106/212 (49%)
Frame = +3
Query: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
L S SDD TV LWDI++G + GH++ V V + ++ S DDQ +
Sbjct: 65643 LASGSDDQTVRLWDISSG-------NCLYTLQGHTSCVRSVVFS-PDGAMLASGGDDQIV 65798
Query: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT 311
+WD S + + +T+ V L F+P + LA GS+D+ V LWD+ + K L+T
Sbjct: 65799 RLWDISSGNC---LYTLQGYTSWVRFLVFSP-NGVTLANGSSDQIVRLWDISSKKC-LYT 65963
Query: 312 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGG 371
+ H + + V +SP T+ + SG D+ + +WD+S + L+I G
Sbjct: 65964 LQGHTNWVNAVAFSPDGATLASGSG-DQTVRLWDISS--------------SKCLYILQG 66098
Query: 372 HTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
HT+ ++ +NP+ + S S D +++W++
Sbjct: 66099 HTSWVNSVVFNPDGS-TLASGSSDQTVRLWEI 66191
Score = 78.2 bits (191), Expect = 1e-12
Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 2/237 (0%)
Frame = +3
Query: 170 LRLRGHQK--EGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
L +GH G S + + L S SDD TV LWDI++G F GH++
Sbjct: 65202 LTCKGHNSWVNSVGFSQDGKM---LASGSDDQTVRLWDISSG-------QCLKTFKGHTS 65351
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
V V + + + S + DQ + +WD S ++ HT V ++FN +
Sbjct: 65352 RVRSVVFSP-NSLMLASGSSDQTVRLWDISSGECL---YIFQGHTGWVYSVAFN-LDGSM 65516
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
LATGS D+TV LWD+ + + + F+ H + V +S + +LAS D+ + +WD+S
Sbjct: 65517 LATGSGDQTVRLWDISSSQC-FYIFQGHTSCVRSVVFS-SDGAMLASGSDDQTVRLWDIS 65690
Query: 348 KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
L+ GHT+ + ++P+ ++ S +D I+++W ++
Sbjct: 65691 S--------------GNCLYTLQGHTSCVRSVVFSPDGA-MLASGGDDQIVRLWDIS 65816
Score = 70.5 bits (171), Expect = 3e-10
Identities = 60/231 (25%), Positives = 113/231 (47%)
Frame = +3
Query: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 232
+GH +++N + S L S S D TV LW+I++ F GH++ V V
Sbjct: 66345 QGHTNWVNSVAFNPDGS-MLASGSGDQTVRLWEISSSK-------CLHTFQGHTSWVSSV 66500
Query: 233 AWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGS 292
+ ++ S +DDQ + +W S ++ + + HT V + F+P ILA+GS
Sbjct: 66501 TFSP-DGTMLASGSDDQTVRLW---SISSGECLYTFLGHTNWVGSVIFSPDGA-ILASGS 66665
Query: 293 ADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEE 352
D+TV LW + + K L+T + H + + + +SP + T+LAS D+ + +W++S
Sbjct: 66666 GDQTVRLWSISSGKC-LYTLQGHNNWVGSIVFSP-DGTLLASGSDDQTVRLWNISS---- 66827
Query: 353 QSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
E L+ GH + +++ ++ ++ S S+D +++W +
Sbjct: 66828 ----------GECLYTLHGHINSVRSVAFS-SDGLILASGSDDETIKLWDV 66947
Score = 48.1 bits (113), Expect = 0.002
Identities = 36/114 (31%), Positives = 56/114 (48%), Gaps = 2/114 (1%)
Frame = +3
Query: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFT--GHSAVVEDVAWHLLHESLFGSVADDQ 249
L S S D TV LW I++G K ++T GH+ V + + +L S +DDQ
Sbjct: 66651 LASGSGDQTVRLWSISSG---------KCLYTLQGHNNWVGSIVFSP-DGTLLASGSDDQ 66800
Query: 250 KLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303
+ +W+ S H H V ++F+ ILA+GS D+T+ LWD++
Sbjct: 66801 TVRLWNISSGECLYTLH---GHINSVRSVAFSS-DGLILASGSDDETIKLWDVK 66950
>dbj|AK004687.1|AK004687 Mus musculus adult male lung cDNA, RIKEN full-length enriched
library, clone:1200010C05:peroxisome biogenesis factor
7, full insert sequence
Length = 1441
Score = 87.8 bits (216), Expect = 2e-15
Identities = 58/215 (26%), Positives = 97/215 (44%), Gaps = 1/215 (0%)
Frame = +3
Query: 135 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL- 193
N H++ T + + ++D K P + H +E Y + W+ L+
Sbjct: 306 NEHVLVTCSGDGSLQLWDTAK---------ATGPLQVYKEHTQEVYSVDWSQTRGEQLVV 458
Query: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
S S D TV +WD G ++ F GH +V+ W F S + DQ L I
Sbjct: 459 SGSWDQTVKVWDPTVG-------NSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRI 617
Query: 254 WDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFE 313
WD + T+ ++ AH E+ + Y+E ++ TG+ D ++ WDLRN++ +
Sbjct: 618 WDVK---TTGVRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVFELL 788
Query: 314 SHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
H I +V +SP + ++LAS D + W+ SK
Sbjct: 789 GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 893
Score = 72.0 bits (175), Expect = 1e-10
Identities = 53/227 (23%), Positives = 96/227 (41%), Gaps = 1/227 (0%)
Frame = +3
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLH- 238
+ ++W+ N L++ S D ++ LWD K ++ H+ V V W
Sbjct: 282 FDVTWSENNEHVLVTCSGDGSLQLWDT------AKATGPLQVYKEHTQEVYSVDWSQTRG 443
Query: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
E L S + DQ + +WD T H + + ++P+ A+ S D+T+
Sbjct: 444 EQLVVSGSWDQTVKVWDP---TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLR 614
Query: 299 LWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 358
+WD++ +++ +H+ EI W +NE ++ + D L WDL + +
Sbjct: 615 IWDVKTTGVRI-VIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVF---- 779
Query: 359 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 405
ELL GHT I ++P V+ S S D ++ W ++
Sbjct: 780 -----ELL----GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 893
Score = 69.7 bits (169), Expect = 5e-10
Identities = 45/173 (26%), Positives = 75/173 (43%)
Frame = +3
Query: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 232
RGH+ Y W+ ++ G SAS D T+ +WD+ K + + H +
Sbjct: 525 RGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV-------KTTGVRIVIPAHQTEILSC 683
Query: 233 AWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGS 292
W +E+L + A D L WD R+ +P + HT + + F+P+ +LA+ S
Sbjct: 684 DWCKYNENLVVTGAVDCSLRGWDLRN--VRQPVFELLGHTYAIRRVKFSPFHASVLASCS 857
Query: 293 ADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
D TV W+ L T E H + + S + T +A D + ++D
Sbjct: 858 YDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCSWDETIKIYD 1016
Score = 42.4 bits (98), Expect = 0.083
Identities = 39/162 (24%), Positives = 61/162 (37%), Gaps = 38/162 (23%)
Frame = +3
Query: 280 FNPYSEFILATGSADK-------TVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETIL 332
F+PY LA +A T+ + D L++ D +F V WS +NE +L
Sbjct: 141 FSPYLPGRLACAAAHDYGIAGCGTLLVLDQNESGLQIFRSFDWNDGLFDVTWSENNEHVL 320
Query: 333 ASSGTDRRLNVWDLSK------IGEEQSAE----DAEDGPPELLFIHG------------ 370
+ D L +WD +K + +E + E D E L + G
Sbjct: 321 VTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPT 500
Query: 371 ---------GHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
GH + I W+P+ P S S D ++IW +
Sbjct: 501 VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 626
>ref|NM_008822.1| Mus musculus peroxisome biogenesis factor 7 (Pex7), mRNA
Length = 1468
Score = 87.8 bits (216), Expect = 2e-15
Identities = 58/215 (26%), Positives = 97/215 (44%), Gaps = 1/215 (0%)
Frame = +3
Query: 135 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL- 193
N H++ T + + ++D K P + H +E Y + W+ L+
Sbjct: 312 NEHVLVTCSGDGSLQLWDTAK---------ATGPLQVYKEHTQEVYSVDWSQTRGEQLVV 464
Query: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
S S D TV +WD G ++ F GH +V+ W F S + DQ L I
Sbjct: 465 SGSWDQTVKVWDPTVG-------NSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRI 623
Query: 254 WDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFE 313
WD + T+ ++ AH E+ + Y+E ++ TG+ D ++ WDLRN++ +
Sbjct: 624 WDVK---TTGVRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVFELL 794
Query: 314 SHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
H I +V +SP + ++LAS D + W+ SK
Sbjct: 795 GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 899
Score = 72.0 bits (175), Expect = 1e-10
Identities = 53/227 (23%), Positives = 96/227 (41%), Gaps = 1/227 (0%)
Frame = +3
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLH- 238
+ ++W+ N L++ S D ++ LWD K ++ H+ V V W
Sbjct: 288 FDVTWSENNEHVLVTCSGDGSLQLWDT------AKATGPLQVYKEHTQEVYSVDWSQTRG 449
Query: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
E L S + DQ + +WD T H + + ++P+ A+ S D+T+
Sbjct: 450 EQLVVSGSWDQTVKVWDP---TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLR 620
Query: 299 LWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 358
+WD++ +++ +H+ EI W +NE ++ + D L WDL + +
Sbjct: 621 IWDVKTTGVRI-VIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVF---- 785
Query: 359 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 405
ELL GHT I ++P V+ S S D ++ W ++
Sbjct: 786 -----ELL----GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 899
Score = 69.7 bits (169), Expect = 5e-10
Identities = 45/173 (26%), Positives = 75/173 (43%)
Frame = +3
Query: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 232
RGH+ Y W+ ++ G SAS D T+ +WD+ K + + H +
Sbjct: 531 RGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV-------KTTGVRIVIPAHQTEILSC 689
Query: 233 AWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGS 292
W +E+L + A D L WD R+ +P + HT + + F+P+ +LA+ S
Sbjct: 690 DWCKYNENLVVTGAVDCSLRGWDLRN--VRQPVFELLGHTYAIRRVKFSPFHASVLASCS 863
Query: 293 ADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
D TV W+ L T E H + + S + T +A D + ++D
Sbjct: 864 YDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCSWDETIKIYD 1022
Score = 42.7 bits (99), Expect = 0.063
Identities = 39/162 (24%), Positives = 61/162 (37%), Gaps = 38/162 (23%)
Frame = +3
Query: 280 FNPYSEFILATGSADK-------TVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETIL 332
F+PY LA +A T+ + D L++ D +F V WS +NE +L
Sbjct: 147 FSPYLPGRLACAAAQHYGIAGCGTLLVLDQNESGLQIFRSFDWNDGLFDVTWSENNEHVL 326
Query: 333 ASSGTDRRLNVWDLSK------IGEEQSAE----DAEDGPPELLFIHG------------ 370
+ D L +WD +K + +E + E D E L + G
Sbjct: 327 VTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPT 506
Query: 371 ---------GHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
GH + I W+P+ P S S D ++IW +
Sbjct: 507 VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 632
>gb|U69171.1|MMU69171 Mus musculus peroxisomal PTS2 receptor mRNA, complete cds
Length = 1468
Score = 87.8 bits (216), Expect = 2e-15
Identities = 58/215 (26%), Positives = 97/215 (44%), Gaps = 1/215 (0%)
Frame = +3
Query: 135 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL- 193
N H++ T + + ++D K P + H +E Y + W+ L+
Sbjct: 312 NEHVLVTCSGDGSLQLWDTAK---------ATGPLQVYKEHTQEVYSVDWSQTRGEQLVV 464
Query: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
S S D TV +WD G ++ F GH +V+ W F S + DQ L I
Sbjct: 465 SGSWDQTVKVWDPTVG-------NSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRI 623
Query: 254 WDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFE 313
WD + T+ ++ AH E+ + Y+E ++ TG+ D ++ WDLRN++ +
Sbjct: 624 WDVK---TTGVRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVFELL 794
Query: 314 SHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
H I +V +SP + ++LAS D + W+ SK
Sbjct: 795 GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 899
Score = 72.0 bits (175), Expect = 1e-10
Identities = 53/227 (23%), Positives = 96/227 (41%), Gaps = 1/227 (0%)
Frame = +3
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLH- 238
+ ++W+ N L++ S D ++ LWD K ++ H+ V V W
Sbjct: 288 FDVTWSENNEHVLVTCSGDGSLQLWDT------AKATGPLQVYKEHTQEVYSVDWSQTRG 449
Query: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVA 298
E L S + DQ + +WD T H + + ++P+ A+ S D+T+
Sbjct: 450 EQLVVSGSWDQTVKVWDP---TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLR 620
Query: 299 LWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 358
+WD++ +++ +H+ EI W +NE ++ + D L WDL + +
Sbjct: 621 IWDVKTTGVRI-VIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVF---- 785
Query: 359 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 405
ELL GHT I ++P V+ S S D ++ W ++
Sbjct: 786 -----ELL----GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 899
Score = 69.7 bits (169), Expect = 5e-10
Identities = 45/173 (26%), Positives = 75/173 (43%)
Frame = +3
Query: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 232
RGH+ Y W+ ++ G SAS D T+ +WD+ K + + H +
Sbjct: 531 RGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV-------KTTGVRIVIPAHQTEILSC 689
Query: 233 AWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGS 292
W +E+L + A D L WD R+ +P + HT + + F+P+ +LA+ S
Sbjct: 690 DWCKYNENLVVTGAVDCSLRGWDLRN--VRQPVFELLGHTYAIRRVKFSPFHASVLASCS 863
Query: 293 ADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
D TV W+ L T E H + + S + T +A D + ++D
Sbjct: 864 YDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCSWDETIKIYD 1022
Score = 42.7 bits (99), Expect = 0.063
Identities = 39/162 (24%), Positives = 61/162 (37%), Gaps = 38/162 (23%)
Frame = +3
Query: 280 FNPYSEFILATGSADK-------TVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETIL 332
F+PY LA +A T+ + D L++ D +F V WS +NE +L
Sbjct: 147 FSPYLPGRLACAAAQHYGIAGCGTLLVLDQNESGLQIFRSFDWNDGLFDVTWSENNEHVL 326
Query: 333 ASSGTDRRLNVWDLSK------IGEEQSAE----DAEDGPPELLFIHG------------ 370
+ D L +WD +K + +E + E D E L + G
Sbjct: 327 VTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPT 506
Query: 371 ---------GHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
GH + I W+P+ P S S D ++IW +
Sbjct: 507 VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 632
>ref|NM_120923.1| katanin p80 subunit - like protein
Length = 2616
Score = 87.8 bits (216), Expect = 2e-15
Identities = 76/258 (29%), Positives = 115/258 (44%)
Frame = +1
Query: 145 SSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLW 204
SS VLV H G+ N L L GH ++++++ G + + + T+ LW
Sbjct: 361 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDAS-EGLVAAGAASGTIKLW 537
Query: 205 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 264
D+ +E K+V TGH + V +H E F S + D L IWD R
Sbjct: 538 DL----EEAKVVRT---LTGHRSNCVSVNFHPFGE-FFASGSLDTNLKIWDIRKKGCI-- 687
Query: 265 SHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHW 324
H HT VN L F P +I++ G D V +WDL KL LH F+SH+ +I + +
Sbjct: 688 -HTYKGHTRGVNVLRFTPDGRWIVS-GGEDNVVKVWDLTAGKL-LHEFKSHEGKIQSLDF 858
Query: 325 SPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPN 384
PH E +LA+ D+ + WDL EL+ G T + ++NP+
Sbjct: 859 HPH-EFLLATGSADKTVKFWDLETF--------------ELIGSGGTETTGVRCLTFNPD 993
Query: 385 EPWVICSVSEDNIMQIWQ 402
V+C + E + W+
Sbjct: 994 GKSVLCGLQESLKIFSWE 1047
Score = 55.1 bits (131), Expect = 1e-05
Identities = 41/176 (23%), Positives = 66/176 (37%), Gaps = 42/176 (23%)
Frame = +1
Query: 270 AHTAEVNCLSFN------------------------------------------PYSEFI 287
AH+A VNCL SE +
Sbjct: 319 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGL 498
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
+A G+A T+ LWDL K+ + T H+ V++ P E AS D L +WD+
Sbjct: 499 VAAGAASGTIKLWDLEEAKV-VRTLTGHRSNCVSVNFHPFGE-FFASGSLDTNLKIWDIR 672
Query: 348 KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
K G + + GHT ++ + P+ W++ S EDN++++W +
Sbjct: 673 KKG--------------CIHTYKGHTRGVNVLRFTPDGRWIV-SGGEDNVVKVWDL 795
>emb|AL023833.1|CEY21F11A Caenorhabditis elegans cosmid Y21F11A, complete sequence
Length = 699
Score = 87.4 bits (215), Expect = 2e-15
Identities = 37/47 (78%), Positives = 43/47 (90%)
Frame = -3
Query: 8 EDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTK 54
+ T E+RV N+EYKIWKKNTPFLYDLVMTHAL+WPSL+VQWLP+V K
Sbjct: 172 DGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAK 32
>gb|AE003554.2|AE003554 Drosophila melanogaster genomic scaffold 142000013386050 section 14 of
54, complete sequence
Length = 285752
Score = 87.0 bits (214), Expect = 3e-15
Identities = 56/174 (32%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
Frame = +3
Query: 168 PDLRLRGHQKEGYGLSWNSNLSGH-LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
P + L+ H+ E Y L W + H LLS S D T+ LWD N ++ I F GH+
Sbjct: 33420 PLICLQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKLWDCN---RQNSITT----FVGHN 33578
Query: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
++ + L +LF SV+ D L +W++ + KP ++AH +E C ++ +
Sbjct: 33579 DLIYGAKFSPLIANLFASVSTDGHLNLWNSL-DFAGKPLMSIEAHASEALCCDWSHFDRN 33755
Query: 287 ILATGSADKTVALWDLRNLKLKLHTFESHKDE--IFQVHWSPHNETILASSGTD 338
+L TG +D + WDLR K++ H FE + E + ++ SPH+ +LAS+ D
Sbjct: 33756 VLVTGGSDGLIRGWDLR--KMRTHVFELYSGEFAVRRLACSPHSAAVLASANYD 33911
Score = 53.9 bits (128), Expect = 3e-05
Identities = 39/123 (31%), Positives = 58/123 (46%), Gaps = 8/123 (6%)
Frame = +3
Query: 231 DVAWHLLHESLFGSVADDQKLMIW-----DTRSN--TTSKPSHLVDAHTAEVNCLSFNP- 282
DVAW + + + D L IW ++ SN T +P + H EV L +
Sbjct: 33300 DVAWCPYAADIAATASGDGSLQIWCGLDGESASNQLTPKQPLICLQEHKNEVYSLDWGEK 33479
Query: 283 YSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
++ L +GS D T+ LWD N + + TF H D I+ +SP + AS TD LN
Sbjct: 33480 WNYHTLLSGSWDCTLKLWDC-NRQNSITTFVGHNDLIYGAKFSPLIANLFASVSTDGHLN 33656
Query: 343 VWD 345
+W+
Sbjct: 33657 LWN 33665
>gb|AC010019.4| Drosophila melanogaster 3L BAC RP98-6F6 (Roswell Park Cancer Institute
Drosophila BAC Library) complete sequence
Length = 195136
Score = 87.0 bits (214), Expect = 3e-15
Identities = 56/174 (32%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
Frame = -3
Query: 168 PDLRLRGHQKEGYGLSWNSNLSGH-LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 226
P + L+ H+ E Y L W + H LLS S D T+ LWD N ++ I F GH+
Sbjct: 37523 PLICLQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKLWDCN---RQNSITT----FVGHN 37365
Query: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
++ + L +LF SV+ D L +W++ + KP ++AH +E C ++ +
Sbjct: 37364 DLIYGAKFSPLIANLFASVSTDGHLNLWNSL-DFAGKPLMSIEAHASEALCCDWSHFDRN 37188
Query: 287 ILATGSADKTVALWDLRNLKLKLHTFESHKDE--IFQVHWSPHNETILASSGTD 338
+L TG +D + WDLR K++ H FE + E + ++ SPH+ +LAS+ D
Sbjct: 37187 VLVTGGSDGLIRGWDLR--KMRTHVFELYSGEFAVRRLACSPHSAAVLASANYD 37032
Score = 53.9 bits (128), Expect = 3e-05
Identities = 39/123 (31%), Positives = 58/123 (46%), Gaps = 8/123 (6%)
Frame = -3
Query: 231 DVAWHLLHESLFGSVADDQKLMIW-----DTRSN--TTSKPSHLVDAHTAEVNCLSFNP- 282
DVAW + + + D L IW ++ SN T +P + H EV L +
Sbjct: 37643 DVAWCPYAADIAATASGDGSLQIWCGLDGESASNQLTPKQPLICLQEHKNEVYSLDWGEK 37464
Query: 283 YSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
++ L +GS D T+ LWD N + + TF H D I+ +SP + AS TD LN
Sbjct: 37463 WNYHTLLSGSWDCTLKLWDC-NRQNSITTFVGHNDLIYGAKFSPLIANLFASVSTDGHLN 37287
Query: 343 VWD 345
+W+
Sbjct: 37286 LWN 37278
>ref|XM_081279.1| similar to LD24014p (D. melanogaster), mRNA
Length = 2783
Score = 85.9 bits (211), Expect = 7e-15
Identities = 63/230 (27%), Positives = 106/230 (45%), Gaps = 1/230 (0%)
Frame = +1
Query: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 232
+ H++ G+S+ S +S SDD T+ +WD +E + GH A V+ V
Sbjct: 904 QAHKEAIRGISF-SPTDSKFVSGSDDGTLRIWDFMRCQEE-------RVLRGHGADVKCV 1059
Query: 233 AWHLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
WH + GS + Q + IWD +S H AH + V L +N + L T
Sbjct: 1060 HWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLH---AHKSTVMDLKWNDNGNW-LVTA 1227
Query: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 351
S D + L+D+RNL+ ++ F HK E V W P +E + S G+D + W+ +G
Sbjct: 1228 SRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWN---VGT 1398
Query: 352 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
++ E+ + H + + +W+P ++CS S D+ ++ W
Sbjct: 1399 DK----------EIGCVETAHDSIVWTLAWHP-LGHILCSGSNDHTIKFW 1515
Score = 61.2 bits (147), Expect = 2e-07
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 2/176 (1%)
Frame = +1
Query: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD--KT 296
+S F S +DD L IWD + ++ H A+V C+ ++P I++ GS D +
Sbjct: 949 DSKFVSGSDDGTLRIWDFMR---CQEERVLRGHGADVKCVHWHPQKGMIVS-GSKDNQQP 1116
Query: 297 VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 356
+ +WD ++ + L T +HK + + W+ + ++ +S D L ++D+ + EE
Sbjct: 1117 IKIWDPKS-GIALATLHAHKSTVMDLKWNDNGNWLVTAS-RDHLLKLFDIRNLREEVQ-- 1284
Query: 357 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
+ GH + S SW+P + CS D + W N+ D+E
Sbjct: 1285 -----------VFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFW----NVGTDKE 1407
>gb|AY051695.1| Drosophila melanogaster LD24014 full length cDNA
Length = 2740
Score = 85.9 bits (211), Expect = 7e-15
Identities = 63/230 (27%), Positives = 106/230 (45%), Gaps = 1/230 (0%)
Frame = +1
Query: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDV 232
+ H++ G+S+ S +S SDD T+ +WD +E + GH A V+ V
Sbjct: 841 QAHKEAIRGISF-SPTDSKFVSGSDDGTLRIWDFMRCQEE-------RVLRGHGADVKCV 996
Query: 233 AWHLLHESLF-GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
WH + GS + Q + IWD +S H AH + V L +N + L T
Sbjct: 997 HWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLH---AHKSTVMDLKWNDNGNW-LVTA 1164
Query: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 351
S D + L+D+RNL+ ++ F HK E V W P +E + S G+D + W+ +G
Sbjct: 1165 SRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWN---VGT 1335
Query: 352 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
++ E+ + H + + +W+P ++CS S D+ ++ W
Sbjct: 1336 DK----------EIGCVETAHDSIVWTLAWHP-LGHILCSGSNDHTIKFW 1452
Score = 61.2 bits (147), Expect = 2e-07
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 2/176 (1%)
Frame = +1
Query: 239 ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD--KT 296
+S F S +DD L IWD + ++ H A+V C+ ++P I++ GS D +
Sbjct: 886 DSKFVSGSDDGTLRIWDFMR---CQEERVLRGHGADVKCVHWHPQKGMIVS-GSKDNQQP 1053
Query: 297 VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 356
+ +WD ++ + L T +HK + + W+ + ++ +S D L ++D+ + EE
Sbjct: 1054 IKIWDPKS-GIALATLHAHKSTVMDLKWNDNGNWLVTAS-RDHLLKLFDIRNLREEVQ-- 1221
Query: 357 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEE 412
+ GH + S SW+P + CS D + W N+ D+E
Sbjct: 1222 -----------VFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFW----NVGTDKE 1344
>gb|U75309.1|HSU75309 Human TBP-associated factor (hTAFII100) mRNA, partial cds
Length = 2443
Score = 85.5 bits (210), Expect = 9e-15
Identities = 72/250 (28%), Positives = 115/250 (45%), Gaps = 3/250 (1%)
Frame = +1
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
L GH YG S++ + + +LLS+S+D TV LW + + GH+ V D
Sbjct: 1618 LYGHSGPVYGASFSPDRN-YLLSSSEDGTVRLWSLQT-------FTCLVGYKGHNYPVWD 1773
Query: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
+ + F S D+ +W T +P + H A+VNC F+P S ++ ATG
Sbjct: 1774 TQFSP-YGYYFVSGGHDRVARLWATDHY---QPLRIFAGHLADVNCTRFHPNSNYV-ATG 1938
Query: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS---K 348
SAD+TV LWD+ N + F HK I + +SP N LA+ TD R+ +WD+
Sbjct: 1939 SADRTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLM 2112
Query: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 408
+GE + GHT + ++ + ++ S S DN +++W +
Sbjct: 2113 VGELK-----------------GHTDTVCSLRFS-RDGEILASGSMDNTVRLWDAIKAFE 2238
Query: 409 NDEESDVTAS 418
+ E D T +
Sbjct: 2239 DLETDDFTTA 2268
>ref|NM_006951.1| Homo sapiens TATA box binding protein (TBP)-associated factor, RNA
polymerase II, D, 100kD (TAF2D), mRNA
Length = 3089
Score = 85.5 bits (210), Expect = 9e-15
Identities = 72/250 (28%), Positives = 115/250 (45%), Gaps = 3/250 (1%)
Frame = +3
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
L GH YG S++ + + +LLS+S+D TV LW + + GH+ V D
Sbjct: 1638 LYGHSGPVYGASFSPDRN-YLLSSSEDGTVRLWSLQT-------FTCLVGYKGHNYPVWD 1793
Query: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
+ + F S D+ +W T +P + H A+VNC F+P S ++ ATG
Sbjct: 1794 TQFSP-YGYYFVSGGHDRVARLWATDHY---QPLRIFAGHLADVNCTRFHPNSNYV-ATG 1958
Query: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS---K 348
SAD+TV LWD+ N + F HK I + +SP N LA+ TD R+ +WD+
Sbjct: 1959 SADRTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLM 2132
Query: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 408
+GE + GHT + ++ + ++ S S DN +++W +
Sbjct: 2133 VGELK-----------------GHTDTVCSLRFS-RDGEILASGSMDNTVRLWDAIKAFE 2258
Query: 409 NDEESDVTAS 418
+ E D T +
Sbjct: 2259 DLETDDFTTA 2288
>emb|X95525.1|HSTAFII10 H.sapiens mRNA for TAFII100 protein
Length = 3089
Score = 85.5 bits (210), Expect = 9e-15
Identities = 72/250 (28%), Positives = 115/250 (45%), Gaps = 3/250 (1%)
Frame = +3
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
L GH YG S++ + + +LLS+S+D TV LW + + GH+ V D
Sbjct: 1638 LYGHSGPVYGASFSPDRN-YLLSSSEDGTVRLWSLQT-------FTCLVGYKGHNYPVWD 1793
Query: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
+ + F S D+ +W T +P + H A+VNC F+P S ++ ATG
Sbjct: 1794 TQFSP-YGYYFVSGGHDRVARLWATDHY---QPLRIFAGHLADVNCTRFHPNSNYV-ATG 1958
Query: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS---K 348
SAD+TV LWD+ N + F HK I + +SP N LA+ TD R+ +WD+
Sbjct: 1959 SADRTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLM 2132
Query: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 408
+GE + GHT + ++ + ++ S S DN +++W +
Sbjct: 2133 VGELK-----------------GHTDTVCSLRFS-RDGEILASGSMDNTVRLWDAIKAFE 2258
Query: 409 NDEESDVTAS 418
+ E D T +
Sbjct: 2259 DLETDDFTTA 2288
>gb|U80191.1|HSU80191 Human TFIID subunit TAFII100 mRNA, complete cds
Length = 2751
Score = 85.5 bits (210), Expect = 9e-15
Identities = 72/250 (28%), Positives = 115/250 (45%), Gaps = 3/250 (1%)
Frame = +3
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
L GH YG S++ + + +LLS+S+D TV LW + + GH+ V D
Sbjct: 1629 LYGHSGPVYGASFSPDRN-YLLSSSEDGTVRLWSLQT-------FTCLVGYKGHNYPVWD 1784
Query: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
+ + F S D+ +W T +P + H A+VNC F+P S ++ ATG
Sbjct: 1785 TQFSP-YGYYFVSGGHDRVARLWATDHY---QPLRIFAGHLADVNCTRFHPNSNYV-ATG 1949
Query: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS---K 348
SAD+TV LWD+ N + F HK I + +SP N LA+ TD R+ +WD+
Sbjct: 1950 SADRTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLM 2123
Query: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 408
+GE + GHT + ++ + ++ S S DN +++W +
Sbjct: 2124 VGELK-----------------GHTDTVCSLRFS-RDGEILASGSMDNTVRLWDAIKAFE 2249
Query: 409 NDEESDVTAS 418
+ E D T +
Sbjct: 2250 DLETDDFTTA 2279
>ref|XM_031978.3| Homo sapiens TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 100 kD (TAF5), mRNA
Length = 3083
Score = 85.5 bits (210), Expect = 9e-15
Identities = 72/250 (28%), Positives = 115/250 (45%), Gaps = 3/250 (1%)
Frame = +3
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
L GH YG S++ + + +LLS+S+D TV LW + + GH+ V D
Sbjct: 1638 LYGHSGPVYGASFSPDRN-YLLSSSEDGTVRLWSLQT-------FTCLVGYKGHNYPVWD 1793
Query: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
+ + F S D+ +W T +P + H A+VNC F+P S ++ ATG
Sbjct: 1794 TQFSP-YGYYFVSGGHDRVARLWATDHY---QPLRIFAGHLADVNCTRFHPNSNYV-ATG 1958
Query: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS---K 348
SAD+TV LWD+ N + F HK I + +SP N LA+ TD R+ +WD+
Sbjct: 1959 SADRTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLM 2132
Query: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIY 408
+GE + GHT + ++ + ++ S S DN +++W +
Sbjct: 2133 VGELK-----------------GHTDTVCSLRFS-RDGEILASGSMDNTVRLWDAIKAFE 2258
Query: 409 NDEESDVTAS 418
+ E D T +
Sbjct: 2259 DLETDDFTTA 2288
>dbj|AK003477.1|AK003477 Mus musculus 18 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:1110005N04:homolog to PCAF
ASSOCIATED FACTOR 65 BETA (PUTATIVE TRANSCRIPTION
FACTOR), full insert sequence
Length = 2010
Score = 77.8 bits (190), Expect(2) = 1e-14
Identities = 56/179 (31%), Positives = 89/179 (49%)
Frame = +3
Query: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303
S + D+ +W S + P + H A+V+C+ F+P S + LATGS DKTV LW +
Sbjct: 450 SGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQ 617
Query: 304 NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPP 363
+ F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 618 QGN-SVRLFTGHRGPVLSLSFSP-NGKYLASAGEDQRLKLWDLAS--------------G 749
Query: 364 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELEG 422
L GHT I+ +++P + +I S S DN +++W + N +D ++SEL G
Sbjct: 750 TLFKELRGHTDSITSLAFSP-DSGLIASASMDNSVRVWDIRSTCCN-TPADGSSSELVG 920
Score = 45.1 bits (105), Expect = 0.013
Identities = 31/118 (26%), Positives = 53/118 (44%)
Frame = +3
Query: 287 ILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
+L +GS D+T LW + L + H ++ V + P N LA+ TD+ + +W
Sbjct: 441 VLCSGSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLW-- 608
Query: 347 SKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
A+ G LF GH + S++PN + + S ED +++W +A
Sbjct: 609 ----------SAQQGNSVRLFT--GHRGPVLSLSFSPNGKY-LASAGEDQRLKLWDLA 743
Score = 27.7 bits (60), Expect(2) = 1e-14
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
LRGH Y + ++ SG LLS S+D ++ WD+ + ++ GH+ V D
Sbjct: 262 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGS-------FTNTVLYQGHAYPVWD 417
Query: 232 V 232
V
Sbjct: 418 V 420
>gb|L24437.1|ATHCOP1A Arabidopsis thaliana (COP1) regulatory protein, complete cds
Length = 2331
Score = 85.1 bits (209), Expect = 1e-14
Identities = 72/282 (25%), Positives = 121/282 (42%)
Frame = +1
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
I H + + ++ + AT S + VFD++ +P +C P + + K
Sbjct: 1141 IFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSFVNEPADM-QC-PIVEMSTRSKLS 1314
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
LSWN + H+ S+ + V +WD+ ++ + H V +
Sbjct: 1315 C-LSWNKHEKNHIASSDYEGIVTVWDVTTR-------QSRMEYEEHEKRAWSVDFSRTEP 1470
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
S+ S +DD K+ +W TR + + A + C+ +NP S +A GSAD +
Sbjct: 1471 SMLVSGSDDCKVKVWCTRQEASVINIDM----KANICCVKYNPGSSNYIAVGSADHHIHY 1638
Query: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 359
+DLRN+ LH F HK + V + +NE LAS+ TD L +WD+ +
Sbjct: 1639 YDLRNISQPLHVFSGHKKAVSYVKFLSNNE--LASASTDSTLRLWDV------------K 1776
Query: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
D P F GHT + + N ++ C SE N + ++
Sbjct: 1777 DNLPVRTF--RGHTNEKNFVGLTVNSEYLACG-SETNEVYVY 1893
>ref|NM_122250.1| putative protein
Length = 2769
Score = 84.3 bits (207), Expect = 2e-14
Identities = 77/258 (29%), Positives = 114/258 (43%)
Frame = +1
Query: 145 SSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLW 204
SS VLV H G+ N L L GH ++++++ + + + T+ LW
Sbjct: 82 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDAS-EVLVAAGAASGTIKLW 258
Query: 205 DINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKP 264
D+ +E KIV TGH + V +H E F S + D L IWD R
Sbjct: 259 DL----EEAKIVRT---LTGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRKKGCI-- 408
Query: 265 SHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHW 324
H HT VN L F P ++++ G D V +WDL KL L F+SH+ +I + +
Sbjct: 409 -HTYKGHTRGVNVLRFTPDGRWVVS-GGEDNIVKVWDLTAGKL-LTEFKSHEGQIQSLDF 579
Query: 325 SPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPN 384
PH E +LA+ DR + WDL EL+ G TA + S+NP+
Sbjct: 580 HPH-EFLLATGSADRTVKFWDLETF--------------ELIGSGGPETAGVRCLSFNPD 714
Query: 385 EPWVICSVSEDNIMQIWQ 402
V+C + E + W+
Sbjct: 715 GKTVLCGLQESLKIFSWE 768
Score = 56.6 bits (135), Expect = 4e-06
Identities = 43/176 (24%), Positives = 65/176 (36%), Gaps = 42/176 (23%)
Frame = +1
Query: 270 AHTAEVNCLSFN------------------------------------------PYSEFI 287
AH+A VNCL SE +
Sbjct: 40 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVL 219
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
+A G+A T+ LWDL K+ + T H+ V + P E AS D L +WD+
Sbjct: 220 VAAGAASGTIKLWDLEEAKI-VRTLTGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIR 393
Query: 348 KIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
K G + + GHT ++ + P+ WV+ S EDNI+++W +
Sbjct: 394 KKG--------------CIHTYKGHTRGVNVLRFTPDGRWVV-SGGEDNIVKVWDL 516
>dbj|AP003581.1|AP003581 Nostoc sp. PCC 7120 DNA, complete genome, section 1/19
Length = 348050
Score = 84.3 bits (207), Expect = 2e-14
Identities = 67/244 (27%), Positives = 113/244 (45%), Gaps = 3/244 (1%)
Frame = +2
Query: 163 SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIF 222
+GEC L ++ S + + L SAS D T+ LWDI G + +
Sbjct: 26372 TGECLKTLSKNTNKVYSVAFSPDGRI---LASASQDQTIKLWDIATG-------NCQQTL 26521
Query: 223 TGHSAVVEDVAWHLLHES---LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLS 279
GH V V + + + L S + DQ + +WD T K + HT EV+ +S
Sbjct: 26522 IGHDDWVWSVTFSPVTDDRPLLLASSSADQHIKLWDV---ATGKCLKTLKGHTREVHSVS 26692
Query: 280 FNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDR 339
F+P + LA+ D TV LWD++ + FE H +++ V +SP +T LAS G DR
Sbjct: 26693 FSPDGQ-TLASSGEDSTVRLWDVKTGQC-WQIFEGHSKKVYSVRFSPDGQT-LASCGEDR 26863
Query: 340 RLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 399
+ +WD+ + E + GH++++ +++P+ +I S S+D +
Sbjct: 26864 SIKLWDIQR--------------GECVNTLWGHSSQVWAIAFSPDGRTLI-SCSDDQTAR 26998
Query: 400 IWQM 403
+W +
Sbjct: 26999 LWDV 27010
Score = 80.1 bits (196), Expect = 4e-13
Identities = 63/231 (27%), Positives = 118/231 (50%), Gaps = 1/231 (0%)
Frame = -3
Query: 172 LRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 230
L+GH + +S++ N G ++ S S DHT+ LW + GK++ GHS V
Sbjct: 318069 LKGHDQGVKSVSFSPN--GEIIASGSSDHTINLWS-----RAGKLL---LSLNGHSQGVN 317920
Query: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
+ + +++ S +DD + +W + +P + +HT +V ++F+P + I++
Sbjct: 317919 SIKFSPEGDTI-ASASDDGTIRLW----SLDGRPLITIPSHTKQVLAVTFSPDGQTIVSA 317755
Query: 291 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
G AD TV LW RN L L T E H + ++QV +SP ++A++ D+ + +W
Sbjct: 317754 G-ADNTVKLWS-RNGTL-LTTLEGHNEAVWQVIFSPDGR-LIATASADKTITLW------ 317605
Query: 351 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
+ DG +L GH +++ S++P+ ++ S S+DN +++W
Sbjct: 317604 -------SRDG--NILGTFAGHNHEVNSLSFSPDGN-ILASGSDDNTVRLW 317482
Score = 77.4 bits (189), Expect = 2e-12
Identities = 67/243 (27%), Positives = 117/243 (47%), Gaps = 2/243 (0%)
Frame = +2
Query: 164 GECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFT 223
GEC L GH + + ++++ + L+S SDD T LWD+ G ++ I
Sbjct: 26891 GECVNTLW--GHSSQVWAIAFSPD-GRTLISCSDDQTARLWDVITG-------NSLNILR 27040
Query: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPY 283
G++ V VA+ + S DD + +W+ ++ H + H + ++F+P
Sbjct: 27041 GYTRDVYSVAFSP-DSQILASGRDDYTIGLWNLKTGEC----HPLRGHQGRIRSVAFHPD 27205
Query: 284 SEFILATGSADKTVALWDL--RNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
+ ILA+GSAD T+ LWD+ N + T H + ++ V +SP T LASS DR +
Sbjct: 27206 GK-ILASGSADNTIKLWDISDTNHSKYIRTLTGHTNWVWTVVFSPDKHT-LASSSEDRTI 27379
Query: 342 NVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
+WD +D D +L GH+ + +++P + ++ S S D+ ++IW
Sbjct: 27380 RLWD----------KDTGDCLQKL----KGHSHWVWTVAFSP-DGRILASGSADSEIKIW 27514
Query: 402 QMA 404
+A
Sbjct: 27515 DVA 27523
Score = 74.3 bits (181), Expect = 2e-11
Identities = 68/242 (28%), Positives = 121/242 (49%), Gaps = 8/242 (3%)
Frame = +1
Query: 170 LRLRGHQKEGYGLSWNS---NLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAKAIFTGH 225
L L+GH K + NS + +G L SASDD T+ LWD+N G +I+ FTGH
Sbjct: 264559 LILKGHGKSSWSGGVNSIAFSPNGKTLASASDDKTIKLWDVNTG---AEII----AFTGH 264717
Query: 226 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSE 285
V V++ ++L S + D+ + +W S T + + + H +V ++F+P +
Sbjct: 264718 EEAVYSVSFSPDGKTLV-SGSKDKSVKLW---SLATGRELYSLKGHLDDVLSVAFSPDGQ 264885
Query: 286 FILATGSA-DKTVALWDLRNLKLKLHTFESHKD---EIFQVHWSPHNETILASSGTDRRL 341
+ + G+ DKT+ +W L K K+ T H + I + +SP + ILAS D+ +
Sbjct: 264886 VVASGGAGNDKTIKIWHL--AKQKVQTITGHSEWFGGINSLAFSP-DGNILASGSWDKNI 265056
Query: 342 NVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
+W + Q++E+ + GH+ + S++PN ++ S S+D +++W
Sbjct: 265057 KLW------QWQNSEE--------ICTLTGHSDHVCCVSFSPNGN-ILASASKDKSIKLW 265191
Query: 402 QM 403
Q+
Sbjct: 265192 QV 265197
Score = 71.2 bits (173), Expect = 2e-10
Identities = 77/283 (27%), Positives = 124/283 (43%), Gaps = 42/283 (14%)
Frame = +2
Query: 163 SGECNPDLRLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAKAI 221
+GEC+P LRGHQ ++++ + G +L S S D+T+ LWDI+ K +
Sbjct: 27140 TGECHP---LRGHQGRIRSVAFHPD--GKILASGSADNTIKLWDIS-DTNHSKYIRT--- 27292
Query: 222 FTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFN 281
TGH+ V V + +L S ++D+ + +WD T + H+ V ++F+
Sbjct: 27293 LTGHTNWVWTVVFSPDKHTLASS-SEDRTIRLWD---KDTGDCLQKLKGHSHWVWTVAFS 27460
Query: 282 PYSEFILATGSADKTVALWD---------------------------------------L 302
P ILA+GSAD + +WD L
Sbjct: 27461 PDGR-ILASGSADSEIKIWDVASGKCLQTLTDPQGMIWSVAFSLDGTLLASASEDQTVKL 27637
Query: 303 RNLKLK--LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
NLK +HT + H+ +++ V +SP N I AS D + +WD+S S D
Sbjct: 27638 WNLKTGECVHTLKGHEKQVYSVAFSP-NGQIAASGSEDTTVKLWDIS----TGSCVDT-- 27796
Query: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
+ GHTA I +++P + ++ S SED +Q+W M
Sbjct: 27797 -------LKHGHTAAIRSVAFSP-DGRLLASGSEDEKIQLWDM 27901
Score = 68.2 bits (165), Expect = 1e-09
Identities = 56/175 (32%), Positives = 87/175 (49%)
Frame = -1
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
L GH E ++++ + L S S D+TV +W +G+++ TGH +
Sbjct: 311735 LTGHNDEVTSVNFSPD-GQFLASGSTDNTVKIWQT-----DGRLIKN---ITGHGLAIAS 311583
Query: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
V + +L S + D + +W T K + ++ H V LSF+P E ILA+G
Sbjct: 311582 VKFSPDSHTL-ASASWDNTIKLWQV---TDGKLINNLNGHIDGVTSLSFSPDGE-ILASG 311418
Query: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
SAD T+ LW+L N L L T H +I + +SP +T+L S G D + VW+L
Sbjct: 311417 SADNTIKLWNLPNATL-LKTLLGHPGKINTLAFSPDGKTLL-SGGEDAGVMVWNL 311259
Score = 63.5 bits (153), Expect = 3e-08
Identities = 47/161 (29%), Positives = 80/161 (49%)
Frame = -1
Query: 242 FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 301
F S D + IW + S S + + + +S++P + I AT SAD T+ LWD
Sbjct: 312062 FASAGWDGNITIWQRETLAHSSLS-TIQKNQNIITTVSYSPDGKTI-ATASADNTIKLWD 311889
Query: 302 LRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG 361
+ +L + T HKD I + + P N+TI AS D+ + +W ++ DG
Sbjct: 311888 SQTQQL-IKTLTGHKDRITTLSFHPDNQTI-ASGSADKTIKIWRVN------------DG 311751
Query: 362 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
+LL GH +++ +++P+ + + S S DN ++IWQ
Sbjct: 311750 --QLLRTLTGHNDEVTSVNFSPDGQF-LASGSTDNTVKIWQ 311637
Score = 63.2 bits (152), Expect = 5e-08
Identities = 50/159 (31%), Positives = 83/159 (51%)
Frame = -3
Query: 191 HLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQK 250
+++SAS D T+ +W + +G+++ GHSA V V ++L S + D+
Sbjct: 317031 NIVSASADKTIKIWSL-----DGRLIRT---LQGHSASVWSVNLSPDGQTL-ASTSQDET 316879
Query: 251 LMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH 310
+ +W N + + + H+ V LSF+P + I A+ S D T+ LW++ N L L
Sbjct: 316878 IKLW----NLNGELIYTLRGHSDVVYNLSFSPDGKTI-ASASDDGTIKLWNVPNGTL-LK 316717
Query: 311 TFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 349
TF+ H+ + V +SP + ILAS G D + VW+L I
Sbjct: 316716 TFQGHRGGVRSVSFSPDGK-ILASGGHDTTVKVWNLEGI 316603
Score = 61.6 bits (148), Expect = 1e-07
Identities = 43/155 (27%), Positives = 80/155 (50%)
Frame = +2
Query: 250 KLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL 309
++ +W T N K + HTA V +F+P S +LA+GSAD T+ LWD+ + L
Sbjct: 26222 EIRLWQTSDN---KQLRIYKGHTAWVWAFAFSPDSR-MLASGSADSTIKLWDVHTGEC-L 26386
Query: 310 HTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIH 369
T + ++++ V +SP ILAS+ D+ + +WD++ +Q+ +D + F
Sbjct: 26387 KTLSKNTNKVYSVAFSPDGR-ILASASQDQTIKLWDIATGNCQQTLIGHDDWVWSVTF-- 26557
Query: 370 GGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
+ ++D + P ++ S S D +++W +A
Sbjct: 26558 ----SPVTD-----DRPLLLASSSADQHIKLWDVA 26635
Score = 61.2 bits (147), Expect = 2e-07
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 2/181 (1%)
Frame = -3
Query: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIW--DTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
H+A V V++ E + S + D + +W D + TT + H VN +SF+P
Sbjct: 318306 HNAWVTSVSYSPDGE-VIASGSVDNTIHLWRRDGKLLTT------LTGHNDGVNSVSFSP 318148
Query: 283 YSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
E ILA+ SAD T+ LW RN +L + T + H + V +SP+ E I+AS +D +N
Sbjct: 318147 DGE-ILASASADSTIKLWQ-RNGQL-ITTLKGHDQGVKSVSFSPNGE-IIASGSSDHTIN 317980
Query: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
+W S+ G +LL GH+ ++ ++P E I S S+D +++W
Sbjct: 317979 LW--SRAG-------------KLLLSLNGHSQGVNSIKFSP-EGDTIASASDDGTIRLWS 317848
Query: 403 M 403
+
Sbjct: 317847 L 317845
Score = 60.5 bits (145), Expect = 3e-07
Identities = 68/278 (24%), Positives = 118/278 (41%), Gaps = 45/278 (16%)
Frame = -1
Query: 171 RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDIN-----------------AGPKEG 213
RL+GH ++ +S++ + L SASDD TV LWDI+ A G
Sbjct: 313007 RLQGHAQQVNAVSFSPD-GKVLASASDDRTVKLWDIHGQLITTITASQKRVTAIAFSHNG 312831
Query: 214 K-IVDAKAIFT---------------------------GHSAVVEDVAWHLLHESLFGSV 245
K + A A +T GH+ +V DV + +++ S
Sbjct: 312830 KYLATANADYTIKLYALDTSCLIVNNLQKCIQLIKTFPGHTDIVTDVVFSPDSKTIVSS- 312654
Query: 246 ADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 305
+ D+ + +W + + +AH VN +SF+P + I A+G D V LW N
Sbjct: 312653 SLDKTIKLWRIDGSII----NTWNAHNGWVNSISFSPDGKMI-ASGGEDNLVKLWQATNG 312489
Query: 306 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
L + T HK+ I V +SP + ILAS+ D+ + W+ DG +
Sbjct: 312488 HL-IKTLTGHKERITSVKFSPDGK-ILASASGDKTIKFWN-------------TDG--KF 312360
Query: 366 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
L H +++ +++ + ++ S D+ M++W++
Sbjct: 312359 LKTIAAHNQQVNSINFSSDSKTLV-SAGADSTMKVWKI 312249
Score = 60.1 bits (144), Expect = 4e-07
Identities = 72/266 (27%), Positives = 116/266 (43%), Gaps = 31/266 (11%)
Frame = -3
Query: 174 GHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAG-PK-----EGKIV------DAKA 220
GH E LS++ + G++L S SDD+TV LW +N PK +G + D K
Sbjct: 317571 GHNHEVNSLSFSPD--GNILASGSDDNTVRLWTVNRTLPKTFYGHKGSVSYVRFSNDGKK 317398
Query: 221 IFTGHSAVVEDVAWHL---LHESLFGSVADDQKLMIW-DTRSNTTSKPSHLVD------- 269
I T S W L L ++L + D + D + + P H +
Sbjct: 317397 I-TSLSTDSTMKTWSLDGKLLQTLSSPLPDVTSISFTPDNKIVALASPDHTIHLYNRQGG 317221
Query: 270 ------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVH 323
H + LSF+P + ILA+GSADKT+ LW + LK T H + +
Sbjct: 317220 LLRSLPGHNHWITSLSFSPNKQ-ILASGSADKTIKLWSVNGRLLK--TLLGHNGWVTDIK 317050
Query: 324 WSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 383
+S + I+++S D+ + +W L DG L+ GH+A + + +P
Sbjct: 317049 FSADGKNIVSAS-ADKTIKIWSL-------------DG--RLIRTLQGHSASVWSVNLSP 316918
Query: 384 NEPWVICSVSEDNIMQIWQM-AENIY 408
+ + S S+D +++W + E IY
Sbjct: 316917 -DGQTLASTSQDETIKLWNLNGELIY 316843
Score = 59.7 bits (143), Expect = 5e-07
Identities = 56/233 (24%), Positives = 105/233 (45%)
Frame = -1
Query: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
++S+S D T+ LW I +G I++ + H+ V +++ + S +D +
Sbjct: 312665 IVSSSLDKTIKLWRI-----DGSIINT---WNAHNGWVNSISFSP-DGKMIASGGEDNLV 312513
Query: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT 311
+W + K + H + + F+P + ILA+ S DKT+ W+ LK T
Sbjct: 312512 KLWQATNGHLIKT---LTGHKERITSVKFSPDGK-ILASASGDKTIKFWNTDGKFLK--T 312351
Query: 312 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGG 371
+H ++ +++S ++T L S+G D + VW + DG L+ G
Sbjct: 312350 IAAHNQQVNSINFSSDSKT-LVSAGADSTMKVWKI-------------DG--TLIKTISG 312219
Query: 372 HTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELEGQG 424
+I D +++P+ VI S S D ++I Q+ N ++S+V + G
Sbjct: 312218 RGEQIRDVTFSPDNK-VIASASSDKTVRIRQL--NYQKSQKSNVNSVSFNPDG 312069
Score = 54.7 bits (130), Expect = 2e-05
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Frame = +1
Query: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRN---LKLKLHTFESHKDEIFQVHWSPH 327
H+ +V + F+P + LA+GSADKTV +W+L N L LK H S + + +SP+
Sbjct: 264451 HSDKVMSVMFSPDGQR-LASGSADKTVRVWNLANEETLILKGHGKSSWSGGVNSIAFSPN 264627
Query: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
+T LAS+ D+ + +WD++ E + GH + S++P+
Sbjct: 264628 GKT-LASASDDKTIKLWDVNTGAE--------------IIAFTGHEEAVYSVSFSPDGKT 264762
Query: 388 VICSVSEDNIMQIWQMA 404
++ S S+D +++W +A
Sbjct: 264763 LV-SGSKDKSVKLWSLA 264810
Score = 53.5 bits (127), Expect = 4e-05
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 6/137 (4%)
Frame = -3
Query: 178 EGYGLS-WNSNLSGH---LLSASDDHTVCLWDINAGPKEGKIVDAKAIFT--GHSAVVED 231
+G+ S W+ NLS L S S D T+ LW++N + I+T GHS VV +
Sbjct: 316959 QGHSASVWSVNLSPDGQTLASTSQDETIKLWNLNG----------ELIYTLRGHSDVVYN 316810
Query: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
+++ +++ S +DD + +W+ + T K H V +SF+P + ILA+G
Sbjct: 316809 LSFSPDGKTI-ASASDDGTIKLWNVPNGTLLKT---FQGHRGGVRSVSFSPDGK-ILASG 316645
Query: 292 SADKTVALWDLRNLKLK 308
D TV +W+L ++L+
Sbjct: 316644 GHDTTVKVWNLEGIELQ 316594
Score = 47.0 bits (110), Expect = 0.003
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +2
Query: 163 SGECNPDLRLRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAKAI 221
+GEC L+ GH+K+ Y ++++ N G + S S+D TV LWDI+ G VD +
Sbjct: 27650 TGECVHTLK--GHEKQVYSVAFSPN--GQIAASGSEDTTVKLWDISTG----SCVDT--L 27799
Query: 222 FTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRS 258
GH+A + VA+ L S ++D+K+ +WD ++
Sbjct: 27800 KHGHTAAIRSVAFSP-DGRLLASGSEDEKIQLWDMQN 27907
>ref|NM_128165.1| expressed protein
Length = 1338
Score = 84.0 bits (206), Expect = 2e-14
Identities = 70/252 (27%), Positives = 118/252 (46%), Gaps = 19/252 (7%)
Frame = +1
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
L GH+ E +SWN++ S L + S D +V +W++ EG D A+ TGH+ V+
Sbjct: 439 LEGHENEVKSVSWNASGSC-LATCSRDKSVWIWEV----LEGNEYDCAAVLTGHTQDVKM 603
Query: 232 VAWHLLHESLFGSVADDQKLMIW-----DTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
V WH + LF S + D + +W D + H++ V +SFN +
Sbjct: 604 VQWHPTMDVLF-SCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGD- 777
Query: 287 ILATGSADKTVALW--DLRNLK--------LKLHTFESHKDE-IFQVHWSPHNETILASS 335
+ T S D T+ +W D+ ++ + L T + D I+ HWS + I+AS
Sbjct: 778 KMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWS--RDDIIASG 951
Query: 336 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI--HGGHTAKISDFSWNPNE-PWVICSV 392
D + ++ SK D+ DGP L + + H ++ W+P E ++ S
Sbjct: 952 AGDNAIRLFVDSK-------HDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASA 1110
Query: 393 SEDNIMQIWQMA 404
S+D +++IWQ+A
Sbjct: 1111SDDGMVKIWQLA 1146
Score = 45.1 bits (105), Expect = 0.013
Identities = 38/148 (25%), Positives = 63/148 (41%), Gaps = 10/148 (6%)
Frame = +1
Query: 268 VDAHTAEVNCLSFNPYSEF------ILATGSADKTVALWDLRNLK----LKLHTFESHKD 317
++ HT V +++NP S ILA+ S D TV +W+ +L K E+H
Sbjct: 145 LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTR 324
Query: 318 EIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKIS 377
+ WSP + +LA++ D +W G E E + GH ++
Sbjct: 325 TVRSCAWSPSGQ-LLATASFDGTTGIW--KNYGSEF----------ECISTLEGHENEVK 465
Query: 378 DFSWNPNEPWVICSVSEDNIMQIWQMAE 405
SWN + + + S D + IW++ E
Sbjct: 466 SVSWNASGS-CLATCSRDKSVWIWEVLE 546
Score = 37.7 bits (86), Expect = 2.0
Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Frame = +1
Query: 303 RNLKL-KLHTFESHKDEIFQVHWSPHN------ETILASSGTDRRLNVWDLSKIGEEQSA 355
+NL+L ++ E H D ++ V W+P + ILAS D + +W+ S + +
Sbjct: 115 KNLELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTC 294
Query: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
+ + HT + +W+P+ ++ + S D IW+
Sbjct: 295 KTV---------LEETHTRTVRSCAWSPSGQ-LLATASFDGTTGIWK 405
>gb|AF443204.1|AF443204 Chlamydomonas reinhardtii WD40-repeat-containing protein (Mut11)
mRNA, complete cds
Length = 1113
Score = 83.6 bits (205), Expect = 3e-14
Identities = 69/249 (27%), Positives = 114/249 (45%), Gaps = 6/249 (2%)
Frame = +1
Query: 162 PSGECNPDLRLR------GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI 215
PS NP + R GH K + ++ + S L S S D TV LWD G + +
Sbjct: 58 PSSTPNPTVAFRCTHALSGHTKAVAAVKFSPDGS-LLASGSADRTVALWDAATGARVNTL 234
Query: 216 VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEV 275
GHS V DVAW+ L + ADD L +WD + + + HT V
Sbjct: 235 A-------GHSCGVSDVAWNPNGRYL-ATAADDHSLKLWDAETGACLRT---LTGHTNYV 381
Query: 276 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 335
C +F+ + +LA+GS D+T+ LWD+R+ + L +H D + +S ++ +++ +S
Sbjct: 382 FCCNFDGAAGHLLASGSFDETLRLWDVRSGRC-LREVPAHSDPVTSAAFS-YDGSMVVTS 555
Query: 336 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
D + +WD ++ G D PP +S ++ PN +V+C+ + D
Sbjct: 556 SLDGLIRLWD-TQTGHCLKTLFDRDSPP------------VSFAAFTPNAKYVLCN-TLD 693
Query: 396 NIMQIWQMA 404
++W A
Sbjct: 694 GRAKLWDYA 720
>gb|AF315714.1|AF315714 Ipomoea nil COP1 mRNA, complete cds
Length = 2312
Score = 83.6 bits (205), Expect = 3e-14
Identities = 72/285 (25%), Positives = 121/285 (42%)
Frame = +3
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
I H + + ++ + AT S + VFD++ +P C P + + K
Sbjct: 1152 IFHSANIVSSIEFDRDDELFATAGVSRRIKVFDFSSVVNEP-ADAHC-PVVEMSTRSKLS 1325
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
LSWN H+ S+ D V +WD+ + + H V +
Sbjct: 1326 C-LSWNKYTKNHIASSDYDGIVTVWDVTTRQSVME-------YEEHEKRAWSVDFSRTDP 1481
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
S+ S +DD K+ +W T+ ++ + A + C+ +NP S F +A GSAD +
Sbjct: 1482 SMLVSGSDDCKVKVWCTKQEASALNIDM----KANICCVKYNPGSSFHVAVGSADHHIHY 1649
Query: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 359
+DLRN LH F HK + V + +E LAS+ TD L +WD+ +
Sbjct: 1650 YDLRNTSAPLHIFSGHKKAVSYVKFLSSHE--LASASTDSTLRLWDV------------K 1787
Query: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
D P +F GHT + + + + ++ C SE N + ++ A
Sbjct: 1788 DNSPVRVF--RGHTNEKNFVGLSVSNEFISCG-SETNEVFVYHKA 1913
>ref|NM_128855.1| photomorphogenesis repressor (COP1)
Length = 2323
Score = 82.8 bits (203), Expect = 6e-14
Identities = 72/282 (25%), Positives = 120/282 (42%)
Frame = +1
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
I H + + ++ + AT S + VFD++ +P +C P + + K
Sbjct: 1141 IFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADM-QC-PIVEMSTRSKLS 1314
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
LSWN + H+ S+ + V +WD+ + + H V +
Sbjct: 1315 C-LSWNKHEKNHIASSDYEGIVTVWDVTTR-------QSLMEYEEHEKRAWSVDFSRTEP 1470
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
S+ S +DD K+ +W TR + + A + C+ +NP S +A GSAD +
Sbjct: 1471 SMLVSGSDDCKVKVWCTRQEASVINIDM----KANICCVKYNPGSSNYIAVGSADHHIHY 1638
Query: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 359
+DLRN+ LH F HK + V + +NE LAS+ TD L +WD+ +
Sbjct: 1639 YDLRNISQPLHVFSGHKKAVSYVKFLSNNE--LASASTDSTLRLWDV------------K 1776
Query: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
D P F GHT + + N ++ C SE N + ++
Sbjct: 1777 DNLPVRTF--RGHTNEKNFVGLTVNSEYLACG-SETNEVYVY 1893
>gb|AF250048.1|AF250048 Zea mays WD-repeat protein RBAP2 (rbap2) gene, partial cds
Length = 851
Score = 82.8 bits (203), Expect = 6e-14
Identities = 62/176 (35%), Positives = 82/176 (46%), Gaps = 2/176 (1%)
Frame = +2
Query: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 64
EM E + ++E Y WK P LYD H L WPSL+ +W P+ K K+ +
Sbjct: 302 EMKERSSSSAAVDERYPQWKSLIPVLYDWFANHNLVWPSLSCRWGPQFEKATYKNRQRLY 481
Query: 65 LVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEG 124
L T S N LV+A + A H E + + ++ I H G
Sbjct: 482 LSEQTDGS-VPNTLVIANCEVVKPRVAA-AEHISQFNEE-----ARSPFVKKYKTIVHPG 640
Query: 125 EVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSG--ECNPDLRLRGHQKE 178
EVNR R +PQN IIAT T S DVLV+D P + G E PDL L GH+++
Sbjct: 641 EVNRIRELPQNSKIIATHTDSPDVLVWDVEAQPNRHAVLGASESRPDLILTGHKED 808
>gb|AF242546.1|AF242546 Homo sapiens YTM1 mRNA, complete cds
Length = 1663
Score = 81.3 bits (199), Expect = 2e-13
Identities = 52/174 (29%), Positives = 89/174 (50%)
Frame = +2
Query: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
P + L GH + + W+ + + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 878 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVESG-------SLKSTLTGNK- 1027
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
V +++ L + L S + D+ + +WD R+ S S + +HT V + ++P E
Sbjct: 1028 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSMVSLSLTSHTGWVTSVKWSPTHEQQ 1204
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1205 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1360
Score = 59.3 bits (142), Expect = 7e-07
Identities = 67/254 (26%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Frame = +2
Query: 174 GHQKEGYGLSW--NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
GH ++W +LS LLSAS D T+ LW+ N E V A GH+ V+
Sbjct: 545 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNV---ERNKVKALHCCRGHAGSVDS 715
Query: 232 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHLV 268
+A + F S + D+ L IW T + T P +
Sbjct: 716 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 892
Query: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQ-VHWSPH 327
H V+ + ++ E + + S D T+ +WD+ + LK T +K +F + +SP
Sbjct: 893 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESGSLK-STLTGNK--VFNCISYSPL 1057
Query: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1058CKR-LASGSTDRHIRLWD----------PRTKDGSMVSLSLTS-HTGWVTSVKWSPTHEQ 1201
Query: 388 VICSVSEDNIMQIW 401
+ S S DNI+++W
Sbjct: 1202QLISGSLDNIVKLW 1243
Score = 55.5 bits (132), Expect = 9e-06
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 9/170 (5%)
Frame = +2
Query: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
+GH V V W E S + D + +WD S + NC+S++P
Sbjct: 893 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVESGSLKSTL----TGNKVFNCISYSP 1054
Query: 283 YSEFILATGSADKTVALWDLRNLKLKLHTFE--SHKDEIFQVHWSPHNETILASSGTDRR 340
+ LA+GS D+ + LWD R + + SH + V WSP +E L S D
Sbjct: 1055 LCKR-LASGSTDRHIRLWDPRTKDGSMVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1231
Query: 341 LNVWD-------LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 383
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1232 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1381
Score = 37.4 bits (85), Expect = 2.7
Identities = 33/134 (24%), Positives = 53/134 (38%), Gaps = 2/134 (1%)
Frame = +2
Query: 285 EFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHN--ETILASSGTDRRLN 342
E+IL TGS DKT +W L + T H D + V W + +L S+ D+ +
Sbjct: 467 EWIL-TGSYDKTSRIWSLEGKSIM--TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTIL 637
Query: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
+W+ + E + L GH + + + CS S D +++IW
Sbjct: 638 LWEW----------NVERNKVKALHCCRGHAGSVDSIAVD-GSGTKFCSGSWDKMLKIWS 784
Query: 403 MAENIYNDEESDVT 416
DE + T
Sbjct: 785 TVPTDEEDEMEEST 826
>ref|XM_087024.1| Homo sapiens WD repeat domain 12 (WDR12), mRNA
Length = 1720
Score = 80.9 bits (198), Expect = 2e-13
Identities = 52/174 (29%), Positives = 89/174 (50%)
Frame = +1
Query: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
P + L GH + + W+ + + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 940 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVESG-------SLKSTLTGNK- 1089
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
V +++ L + L S + D+ + +WD R+ S S + +HT V + ++P E
Sbjct: 1090 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1266
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1267 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1422
Score = 58.9 bits (141), Expect = 9e-07
Identities = 67/254 (26%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Frame = +1
Query: 174 GHQKEGYGLSW--NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
GH ++W +LS LLSAS D T+ LW+ N E V A GH+ V+
Sbjct: 607 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNV---ERNKVKALHCCRGHAGSVDS 777
Query: 232 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHLV 268
+A + F S + D+ L IW T + T P +
Sbjct: 778 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 954
Query: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQ-VHWSPH 327
H V+ + ++ E + + S D T+ +WD+ + LK T +K +F + +SP
Sbjct: 955 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESGSLK-STLTGNK--VFNCISYSPL 1119
Query: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1120CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1263
Query: 388 VICSVSEDNIMQIW 401
+ S S DNI+++W
Sbjct: 1264QLISGSLDNIVKLW 1305
Score = 56.2 bits (134), Expect = 6e-06
Identities = 44/170 (25%), Positives = 69/170 (39%), Gaps = 9/170 (5%)
Frame = +1
Query: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
+GH V V W E S + D + +WD S + NC+S++P
Sbjct: 955 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVESGSLKSTL----TGNKVFNCISYSP 1116
Query: 283 YSEFILATGSADKTVALWDLRNLKLKLHTFE--SHKDEIFQVHWSPHNETILASSGTDRR 340
+ LA+GS D+ + LWD R L + SH + V WSP +E L S D
Sbjct: 1117 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1293
Query: 341 LNVWD-------LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 383
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1294 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1443
Score = 37.4 bits (85), Expect = 2.7
Identities = 33/134 (24%), Positives = 53/134 (38%), Gaps = 2/134 (1%)
Frame = +1
Query: 285 EFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHN--ETILASSGTDRRLN 342
E+IL TGS DKT +W L + T H D + V W + +L S+ D+ +
Sbjct: 529 EWIL-TGSYDKTSRIWSLEGKSIM--TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTIL 699
Query: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
+W+ + E + L GH + + + CS S D +++IW
Sbjct: 700 LWEW----------NVERNKVKALHCCRGHAGSVDSIAVD-GSGTKFCSGSWDKMLKIWS 846
Query: 403 MAENIYNDEESDVT 416
DE + T
Sbjct: 847 TVPTDEEDEMEEST 888
>ref|NM_018256.2| Homo sapiens WD repeat domain 12 (WDR12), mRNA
Length = 1720
Score = 80.9 bits (198), Expect = 2e-13
Identities = 52/174 (29%), Positives = 89/174 (50%)
Frame = +1
Query: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
P + L GH + + W+ + + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 940 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVGSG-------SLKSTLTGNK- 1089
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
V +++ L + L S + D+ + +WD R+ S S + +HT V + ++P E
Sbjct: 1090 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1266
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1267 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1422
Score = 58.2 bits (139), Expect = 1e-06
Identities = 67/254 (26%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Frame = +1
Query: 174 GHQKEGYGLSW--NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
GH ++W +LS LLSAS D T+ LW+ N E V A GH+ V+
Sbjct: 607 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNV---ERNKVKALHCCRGHAGSVDS 777
Query: 232 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHLV 268
+A + F S + D+ L IW T + T P +
Sbjct: 778 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 954
Query: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQ-VHWSPH 327
H V+ + ++ E + + S D T+ +WD+ + LK T +K +F + +SP
Sbjct: 955 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVGSGSLK-STLTGNK--VFNCISYSPL 1119
Query: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1120CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1263
Query: 388 VICSVSEDNIMQIW 401
+ S S DNI+++W
Sbjct: 1264QLISGSLDNIVKLW 1305
Score = 55.5 bits (132), Expect = 9e-06
Identities = 44/170 (25%), Positives = 69/170 (39%), Gaps = 9/170 (5%)
Frame = +1
Query: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
+GH V V W E S + D + +WD S + NC+S++P
Sbjct: 955 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVGSGSLKSTL----TGNKVFNCISYSP 1116
Query: 283 YSEFILATGSADKTVALWDLRNLKLKLHTFE--SHKDEIFQVHWSPHNETILASSGTDRR 340
+ LA+GS D+ + LWD R L + SH + V WSP +E L S D
Sbjct: 1117 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1293
Query: 341 LNVWD-------LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 383
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1294 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1443
Score = 37.4 bits (85), Expect = 2.7
Identities = 33/134 (24%), Positives = 53/134 (38%), Gaps = 2/134 (1%)
Frame = +1
Query: 285 EFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHN--ETILASSGTDRRLN 342
E+IL TGS DKT +W L + T H D + V W + +L S+ D+ +
Sbjct: 529 EWIL-TGSYDKTSRIWSLEGKSIM--TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTIL 699
Query: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
+W+ + E + L GH + + + CS S D +++IW
Sbjct: 700 LWEW----------NVERNKVKALHCCRGHAGSVDSIAVD-GSGTKFCSGSWDKMLKIWS 846
Query: 403 MAENIYNDEESDVT 416
DE + T
Sbjct: 847 TVPTDEEDEMEEST 888
>dbj|AK022782.1|AK022782 Homo sapiens cDNA FLJ12720 fis, clone NT2RP1001302, weakly similar to
MICROTUBULE-ASSOCIATED PROTEIN YTM1
Length = 1720
Score = 80.9 bits (198), Expect = 2e-13
Identities = 52/174 (29%), Positives = 89/174 (50%)
Frame = +1
Query: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
P + L GH + + W+ + + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 940 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVGSG-------SLKSTLTGNK- 1089
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
V +++ L + L S + D+ + +WD R+ S S + +HT V + ++P E
Sbjct: 1090 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1266
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1267 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1422
Score = 58.2 bits (139), Expect = 1e-06
Identities = 67/254 (26%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Frame = +1
Query: 174 GHQKEGYGLSW--NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
GH ++W +LS LLSAS D T+ LW+ N E V A GH+ V+
Sbjct: 607 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNV---ERNKVKALHCCRGHAGSVDS 777
Query: 232 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHLV 268
+A + F S + D+ L IW T + T P +
Sbjct: 778 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 954
Query: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQ-VHWSPH 327
H V+ + ++ E + + S D T+ +WD+ + LK T +K +F + +SP
Sbjct: 955 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVGSGSLK-STLTGNK--VFNCISYSPL 1119
Query: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1120CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1263
Query: 388 VICSVSEDNIMQIW 401
+ S S DNI+++W
Sbjct: 1264QLISGSLDNIVKLW 1305
Score = 55.5 bits (132), Expect = 9e-06
Identities = 44/170 (25%), Positives = 69/170 (39%), Gaps = 9/170 (5%)
Frame = +1
Query: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
+GH V V W E S + D + +WD S + NC+S++P
Sbjct: 955 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVGSGSLKSTL----TGNKVFNCISYSP 1116
Query: 283 YSEFILATGSADKTVALWDLRNLKLKLHTFE--SHKDEIFQVHWSPHNETILASSGTDRR 340
+ LA+GS D+ + LWD R L + SH + V WSP +E L S D
Sbjct: 1117 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1293
Query: 341 LNVWD-------LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 383
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1294 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1443
Score = 37.4 bits (85), Expect = 2.7
Identities = 33/134 (24%), Positives = 53/134 (38%), Gaps = 2/134 (1%)
Frame = +1
Query: 285 EFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHN--ETILASSGTDRRLN 342
E+IL TGS DKT +W L + T H D + V W + +L S+ D+ +
Sbjct: 529 EWIL-TGSYDKTSRIWSLEGKSIM--TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTIL 699
Query: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
+W+ + E + L GH + + + CS S D +++IW
Sbjct: 700 LWEW----------NVERNKVKALHCCRGHAGSVDSIAVD-GSGTKFCSGSWDKMLKIWS 846
Query: 403 MAENIYNDEESDVT 416
DE + T
Sbjct: 847 TVPTDEEDEMEEST 888
>dbj|AK022781.1|AK022781 Homo sapiens cDNA FLJ12719 fis, clone NT2RP1001294, weakly similar to
MICROTUBULE-ASSOCIATED PROTEIN YTM1
Length = 1720
Score = 80.9 bits (198), Expect = 2e-13
Identities = 52/174 (29%), Positives = 89/174 (50%)
Frame = +1
Query: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
P + L GH + + W+ + + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 940 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVGSG-------SLKSTLTGNK- 1089
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
V +++ L + L S + D+ + +WD R+ S S + +HT V + ++P E
Sbjct: 1090 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1266
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1267 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1422
Score = 58.2 bits (139), Expect = 1e-06
Identities = 67/254 (26%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Frame = +1
Query: 174 GHQKEGYGLSW--NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
GH ++W +LS LLSAS D T+ LW+ N E V A GH+ V+
Sbjct: 607 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNV---ERNKVKALHCCRGHAGSVDS 777
Query: 232 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHLV 268
+A + F S + D+ L IW T + T P +
Sbjct: 778 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 954
Query: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQ-VHWSPH 327
H V+ + ++ E + + S D T+ +WD+ + LK T +K +F + +SP
Sbjct: 955 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVGSGSLK-STLTGNK--VFNCISYSPL 1119
Query: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1120CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1263
Query: 388 VICSVSEDNIMQIW 401
+ S S DNI+++W
Sbjct: 1264QLISGSLDNIVKLW 1305
Score = 55.5 bits (132), Expect = 9e-06
Identities = 44/170 (25%), Positives = 69/170 (39%), Gaps = 9/170 (5%)
Frame = +1
Query: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
+GH V V W E S + D + +WD S + NC+S++P
Sbjct: 955 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVGSGSLKSTL----TGNKVFNCISYSP 1116
Query: 283 YSEFILATGSADKTVALWDLRNLKLKLHTFE--SHKDEIFQVHWSPHNETILASSGTDRR 340
+ LA+GS D+ + LWD R L + SH + V WSP +E L S D
Sbjct: 1117 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1293
Query: 341 LNVWD-------LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 383
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1294 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1443
Score = 37.4 bits (85), Expect = 2.7
Identities = 33/134 (24%), Positives = 53/134 (38%), Gaps = 2/134 (1%)
Frame = +1
Query: 285 EFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHN--ETILASSGTDRRLN 342
E+IL TGS DKT +W L + T H D + V W + +L S+ D+ +
Sbjct: 529 EWIL-TGSYDKTSRIWSLEGKSIM--TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTIL 699
Query: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
+W+ + E + L GH + + + CS S D +++IW
Sbjct: 700 LWEW----------NVERNKVKALHCCRGHAGSVDSIAVD-GSGTKFCSGSWDKMLKIWS 846
Query: 403 MAENIYNDEESDVT 416
DE + T
Sbjct: 847 TVPTDEEDEMEEST 888
>dbj|AK001743.1|AK001743 Homo sapiens cDNA FLJ10881 fis, clone NT2RP4001927, weakly similar to
MICROTUBULE-ASSOCIATED PROTEIN YTM1
Length = 1707
Score = 80.9 bits (198), Expect = 2e-13
Identities = 52/174 (29%), Positives = 89/174 (50%)
Frame = +2
Query: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
P + L GH + + W+ + + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 932 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVESG-------SLKSTLTGNK- 1081
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
V +++ L + L S + D+ + +WD R+ S S + +HT V + ++P E
Sbjct: 1082 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1258
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1259 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1414
Score = 58.9 bits (141), Expect = 9e-07
Identities = 67/254 (26%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Frame = +2
Query: 174 GHQKEGYGLSW--NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
GH ++W +LS LLSAS D T+ LW+ N E V A GH+ V+
Sbjct: 599 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNV---ERNKVKALHCCRGHAGSVDS 769
Query: 232 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHLV 268
+A + F S + D+ L IW T + T P +
Sbjct: 770 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 946
Query: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQ-VHWSPH 327
H V+ + ++ E + + S D T+ +WD+ + LK T +K +F + +SP
Sbjct: 947 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESGSLK-STLTGNK--VFNCISYSPL 1111
Query: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1112CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1255
Query: 388 VICSVSEDNIMQIW 401
+ S S DNI+++W
Sbjct: 1256QLISGSLDNIVKLW 1297
Score = 56.2 bits (134), Expect = 6e-06
Identities = 44/170 (25%), Positives = 69/170 (39%), Gaps = 9/170 (5%)
Frame = +2
Query: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
+GH V V W E S + D + +WD S + NC+S++P
Sbjct: 947 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVESGSLKSTL----TGNKVFNCISYSP 1108
Query: 283 YSEFILATGSADKTVALWDLRNLKLKLHTFE--SHKDEIFQVHWSPHNETILASSGTDRR 340
+ LA+GS D+ + LWD R L + SH + V WSP +E L S D
Sbjct: 1109 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1285
Query: 341 LNVWD-------LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 383
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1286 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1435
Score = 37.4 bits (85), Expect = 2.7
Identities = 33/134 (24%), Positives = 53/134 (38%), Gaps = 2/134 (1%)
Frame = +2
Query: 285 EFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHN--ETILASSGTDRRLN 342
E+IL TGS DKT +W L + T H D + V W + +L S+ D+ +
Sbjct: 521 EWIL-TGSYDKTSRIWSLEGKSIM--TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTIL 691
Query: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
+W+ + E + L GH + + + CS S D +++IW
Sbjct: 692 LWEW----------NVERNKVKALHCCRGHAGSVDSIAVD-GSGTKFCSGSWDKMLKIWS 838
Query: 403 MAENIYNDEESDVT 416
DE + T
Sbjct: 839 TVPTDEEDEMEEST 880
>dbj|AK056092.1|AK056092 Homo sapiens cDNA FLJ31530 fis, clone NT2RI2000578, highly similar to
Homo sapiens YTM1 mRNA
Length = 2275
Score = 80.9 bits (198), Expect = 2e-13
Identities = 52/174 (29%), Positives = 89/174 (50%)
Frame = +1
Query: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
P + L GH + + W+ + + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 1495 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVESG-------SLKSTLTGNK- 1644
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
V +++ L + L S + D+ + +WD R+ S S + +HT V + ++P E
Sbjct: 1645 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1821
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1822 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1977
Score = 58.9 bits (141), Expect = 9e-07
Identities = 67/254 (26%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Frame = +1
Query: 174 GHQKEGYGLSW--NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
GH ++W +LS LLSAS D T+ LW+ N E V A GH+ V+
Sbjct: 1162 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNV---ERNKVKALHCCRGHAGSVDS 1332
Query: 232 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHLV 268
+A + F S + D+ L IW T + T P +
Sbjct: 1333 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 1509
Query: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQ-VHWSPH 327
H V+ + ++ E + + S D T+ +WD+ + LK T +K +F + +SP
Sbjct: 1510 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESGSLK-STLTGNK--VFNCISYSPL 1674
Query: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1675 CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1818
Query: 388 VICSVSEDNIMQIW 401
+ S S DNI+++W
Sbjct: 1819 QLISGSLDNIVKLW 1860
Score = 56.2 bits (134), Expect = 6e-06
Identities = 44/170 (25%), Positives = 69/170 (39%), Gaps = 9/170 (5%)
Frame = +1
Query: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
+GH V V W E S + D + +WD S + NC+S++P
Sbjct: 1510 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVESGSLKSTL----TGNKVFNCISYSP 1671
Query: 283 YSEFILATGSADKTVALWDLRNLKLKLHTFE--SHKDEIFQVHWSPHNETILASSGTDRR 340
+ LA+GS D+ + LWD R L + SH + V WSP +E L S D
Sbjct: 1672 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1848
Query: 341 LNVWD-------LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 383
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1849 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1998
Score = 37.4 bits (85), Expect = 2.7
Identities = 33/134 (24%), Positives = 53/134 (38%), Gaps = 2/134 (1%)
Frame = +1
Query: 285 EFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHN--ETILASSGTDRRLN 342
E+IL TGS DKT +W L + T H D + V W + +L S+ D+ +
Sbjct: 1084 EWIL-TGSYDKTSRIWSLEGKSIM--TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTIL 1254
Query: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
+W+ + E + L GH + + + CS S D +++IW
Sbjct: 1255 LWEW----------NVERNKVKALHCCRGHAGSVDSIAVD-GSGTKFCSGSWDKMLKIWS 1401
Query: 403 MAENIYNDEESDVT 416
DE + T
Sbjct: 1402 TVPTDEEDEMEEST 1443
>gb|BC008082.1|BC008082 Homo sapiens, clone MGC:835 IMAGE:3050219, mRNA, complete cds
Length = 1681
Score = 80.9 bits (198), Expect = 2e-13
Identities = 52/174 (29%), Positives = 89/174 (50%)
Frame = +2
Query: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
P + L GH + + W+ + + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 884 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVESG-------SLKSTLTGNK- 1033
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
V +++ L + L S + D+ + +WD R+ S S + +HT V + ++P E
Sbjct: 1034 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1210
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1211 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1366
Score = 58.9 bits (141), Expect = 9e-07
Identities = 67/254 (26%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Frame = +2
Query: 174 GHQKEGYGLSW--NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
GH ++W +LS LLSAS D T+ LW+ N E V A GH+ V+
Sbjct: 551 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNV---ERNKVKALHCCRGHAGSVDS 721
Query: 232 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHLV 268
+A + F S + D+ L IW T + T P +
Sbjct: 722 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 898
Query: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQ-VHWSPH 327
H V+ + ++ E + + S D T+ +WD+ + LK T +K +F + +SP
Sbjct: 899 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESGSLK-STLTGNK--VFNCISYSPL 1063
Query: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1064CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1207
Query: 388 VICSVSEDNIMQIW 401
+ S S DNI+++W
Sbjct: 1208QLISGSLDNIVKLW 1249
Score = 56.2 bits (134), Expect = 6e-06
Identities = 44/170 (25%), Positives = 69/170 (39%), Gaps = 9/170 (5%)
Frame = +2
Query: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
+GH V V W E S + D + +WD S + NC+S++P
Sbjct: 899 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVESGSLKSTL----TGNKVFNCISYSP 1060
Query: 283 YSEFILATGSADKTVALWDLRNLKLKLHTFE--SHKDEIFQVHWSPHNETILASSGTDRR 340
+ LA+GS D+ + LWD R L + SH + V WSP +E L S D
Sbjct: 1061 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1237
Query: 341 LNVWD-------LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNP 383
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1238 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1387
Score = 37.4 bits (85), Expect = 2.7
Identities = 33/134 (24%), Positives = 53/134 (38%), Gaps = 2/134 (1%)
Frame = +2
Query: 285 EFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHN--ETILASSGTDRRLN 342
E+IL TGS DKT +W L + T H D + V W + +L S+ D+ +
Sbjct: 473 EWIL-TGSYDKTSRIWSLEGKSIM--TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTIL 643
Query: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
+W+ + E + L GH + + + CS S D +++IW
Sbjct: 644 LWEW----------NVERNKVKALHCCRGHAGSVDSIAVD-GSGTKFCSGSWDKMLKIWS 790
Query: 403 MAENIYNDEESDVT 416
DE + T
Sbjct: 791 TVPTDEEDEMEEST 832
>ref|NM_106276.1| unknown protein
Length = 1159
Score = 80.5 bits (197), Expect = 3e-13
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 9/245 (3%)
Frame = +1
Query: 160 PDPSGECNPDL-----RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 214
P+P G+ N L H + + W + + L + D+ + W +++ K +
Sbjct: 295 PEPYGQSNSSTLECVASLDAHVGKINCVLWCPSGNSDKLISMDEQNLVFWSLDSSKKSAE 474
Query: 215 IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE 274
++ ++ HS + AW+ H+ + + + WD R T K + + AH
Sbjct: 475 VLSKESAGMRHS--LSGGAWNP-HDVNSVAATSESSIQFWDLR--TMKKNNSIERAHVRN 639
Query: 275 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILAS 334
V+ +N E IL + + + LWDLR K + H + V +P E ++ S
Sbjct: 640 VD---YNLKREHILVSADDESGIHLWDLRKTKFPVQELPGHTHWTWAVRCNPEYEELILS 810
Query: 335 SGTDRRLNVWDLSKIGEEQSAEDAEDGPPE----LLFIHGGHTAKISDFSWNPNEPWVIC 390
GTD +N+W S E +++E + + LL + + + +W+ EPW+
Sbjct: 811 VGTDSAVNLWFASASSEHKTSESPVEASRQRVNPLLNSYTDYEDSVYGLAWSSREPWIFA 990
Query: 391 SVSED 395
S+S D
Sbjct: 991 SLSYD 1005
Score = 48.5 bits (114), Expect = 0.001
Identities = 59/257 (22%), Positives = 104/257 (39%), Gaps = 10/257 (3%)
Frame = +1
Query: 172 LRGHQKEGYGLS---WNSNLSGHLLSASDDHTVCLWDINA--GPKEGKIVDAKAIFTGHS 226
L H E + L+ ++ + + S D + +W I G ++ A H
Sbjct: 181 LFSHPNEIWDLASSPFDQRIFSTVFSTGDSYGAAIWQIPEPYGQSNSSTLECVASLDAHV 360
Query: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEV-NCLS---FNP 282
+ V W S D+Q L+ W S+ K + ++ +A + + LS +NP
Sbjct: 361 GKINCVLWCPSGNSDKLISMDEQNLVFWSLDSS--KKSAEVLSKESAGMRHSLSGGAWNP 534
Query: 283 YSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
+ +A S + ++ WDLR +K +H + V ++ E IL S+ + ++
Sbjct: 535 HDVNSVAATS-ESSIQFWDLRTMKKNNSIERAH---VRNVDYNLKREHILVSADDESGIH 702
Query: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW- 401
+WDL K + ++ P GHT NP +I SV D+ + +W
Sbjct: 703 LWDLRK-----TKFPVQELP--------GHTHWTWAVRCNPEYEELILSVGTDSAVNLWF 843
Query: 402 QMAENIYNDEESDVTAS 418
A + + ES V AS
Sbjct: 844 ASASSEHKTSESPVEAS 894
>ref|NM_119703.1| putative protein
Length = 1245
Score = 80.5 bits (197), Expect = 3e-13
Identities = 55/171 (32%), Positives = 90/171 (52%)
Frame = +1
Query: 134 QNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL 193
+N +I+A+ + V V+D +G+C + + H+K+ + ++WN+ LL
Sbjct: 673 ENRNIVASGSEDKKVKVWDVA--------TGKCK--VTMEHHEKKVHAVAWNNYTPEVLL 822
Query: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
S S D TV L K+G+ + A VE +AW E F D +
Sbjct: 823 SGSRDRTVVL-------KDGRDPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKG 981
Query: 254 WDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 304
+DTR++ S PS ++ AH +EV+ +S+N ++ +LATGSAD++V LWDL N
Sbjct: 982 FDTRASDLS-PSFIIHAHDSEVSSISYNIHAPNLLATGSADESVKLWDLSN 1131
Score = 52.4 bits (124), Expect = 8e-05
Identities = 40/162 (24%), Positives = 72/162 (43%), Gaps = 33/162 (20%)
Frame = +1
Query: 278 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT 337
L+FN + I+A+GS DK V +WD+ K K+ T E H+ ++ V W+ + +L S
Sbjct: 658 LTFNWENRNIVASGSEDKKVKVWDVATGKCKV-TMEHHEKKVHAVAWNNYTPEVLLSGSR 834
Query: 338 DRRLNVWD----------------LSKIGEEQSAED-----------------AEDGPPE 364
DR + + D + K+ + +E A D P
Sbjct: 835 DRTVVLKDGRDPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPS 1014
Query: 365 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 406
FI H +++S S+N + P ++ + S D +++W ++ N
Sbjct: 1015--FIIHAHDSEVSSISYNIHAPNLLATGSADESVKLWDLSNN 1134
>gb|AF115313.1|AF115313 Thermomonospora curvata PkwR (pkwR) and PkwA (pkwA) genes, complete
cds
Length = 4619
Score = 80.1 bits (196), Expect = 4e-13
Identities = 68/253 (26%), Positives = 106/253 (41%), Gaps = 40/253 (15%)
Frame = +1
Query: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
L S SDD TV LWD+ A + +A+F GH+ V D+A+ S+ S + D
Sbjct: 3595 LASGSDDATVRLWDVAAA-------EERAVFEGHTHYVLDIAFSP-DGSMVASGSRDGTA 3750
Query: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK--- 308
+W+ + T ++ HT V ++F+P + A+GS D T+ LWD+ K +
Sbjct: 3751 RLWNVATGTEHA---VLKGHTDYVYAVAFSPDGSMV-ASGSRDGTIRLWDVATGKERDVL 3918
Query: 309 -------------------------------------LHTFESHKDEIFQVHWSPHNETI 331
LHTFE H D + V +SP +
Sbjct: 3919 QAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDG-AL 4095
Query: 332 LASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 391
LAS DR + +WD++ E + E GHT + +++P E + S
Sbjct: 4096 LASGSDDRTIRLWDVAAQEEHTTLE--------------GHTEPVHSVAFHP-EGTTLAS 4230
Query: 392 VSEDNIMQIWQMA 404
SED ++IW +A
Sbjct: 4231 ASEDGTIRIWPIA 4269
Score = 64.3 bits (155), Expect = 2e-08
Identities = 52/176 (29%), Positives = 87/176 (48%)
Frame = +1
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
L+GH Y ++++ + S + S S D T+ LWD+ G KE ++ A A A D
Sbjct: 3790 LKGHTDYVYAVAFSPDGS-MVASGSRDGTIRLWDVATG-KERDVLQAPAENVVSLAFSPD 3963
Query: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
+ L+H S D + +WD S + H + HT V ++F+P +LA+G
Sbjct: 3964 GSM-LVHGS-------DSTVHLWDVASG---EALHTFEGHTDWVRAVAFSPDGA-LLASG 4107
Query: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
S D+T+ LWD+ + + T E H + + V + P T LAS+ D + +W ++
Sbjct: 4108 SDDRTIRLWDVA-AQEEHTTLEGHTEPVHSVAFHPEG-TTLASASEDGTIRIWPIA 4269
Score = 57.4 bits (137), Expect = 2e-06
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Frame = +1
Query: 257 RSNTTSKPSHLVDAHTA----------EVNCLSFNPYSEFILATGSADKTVALWDLRNLK 306
R ++++ PS D H E ++F+P +LA GS DK + +WD+ +
Sbjct: 3349 RPDSSTAPSESADPHELNEPRILTTDREAVAVAFSPGGS-LLAGGSGDKLIHVWDVASGD 3525
Query: 307 LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELL 366
+LHT E H D + V +SP + +LAS D + +WD++ E E
Sbjct: 3526 -ELHTLEGHTDWVRAVAFSP-DGALLASGSDDATVRLWDVAAAEERAVFE---------- 3669
Query: 367 FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
GHT + D +++P+ ++ S S D ++W +A
Sbjct: 3670 ----GHTHYVLDIAFSPDGS-MVASGSRDGTARLWNVA 3768
>dbj|AK016611.1|AK016611 Mus musculus adult male testis cDNA, RIKEN full-length enriched
library, clone:4933402C23:WD repeat domain 12, full
insert sequence
Length = 2781
Score = 79.7 bits (195), Expect = 5e-13
Identities = 53/180 (29%), Positives = 91/180 (50%)
Frame = +2
Query: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
P + L GH + + W+ + + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 959 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESG-------GLKSTLTGNK- 1108
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
V +++ L + L S + D+ + +WD R+ S S + +HT V + ++P E
Sbjct: 1109 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1285
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1286 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1459
Score = 59.3 bits (142), Expect = 7e-07
Identities = 67/254 (26%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +2
Query: 174 GHQKEGYGLSW--NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
GH ++W +LS LL+AS D TV LW+ N E V A GH+ V+
Sbjct: 626 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNV---EKNKVKALHCCRGHAGSVDA 796
Query: 232 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHLV 268
+A + F S + D+ L IW T + T P +
Sbjct: 797 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 973
Query: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQ-VHWSPH 327
HT ++ + ++ E + + S D T+ +WD+ + LK T +K +F + +SP
Sbjct: 974 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 1138
Query: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1139CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1282
Query: 388 VICSVSEDNIMQIW 401
+ S S DNI+++W
Sbjct: 1283QLISGSLDNIVKLW 1324
>dbj|AK007500.1|AK007500 Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
enriched library, clone:1810014N03:WD repeat domain 12,
full insert sequence
Length = 1427
Score = 79.7 bits (195), Expect = 5e-13
Identities = 53/180 (29%), Positives = 91/180 (50%)
Frame = +3
Query: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
P + L GH + + W+ + + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 882 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESG-------GLKSTLTGNK- 1031
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
V +++ L + L S + D+ + +WD R+ S S + +HT V + ++P E
Sbjct: 1032 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1208
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1209 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1382
Score = 59.3 bits (142), Expect = 7e-07
Identities = 67/254 (26%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +3
Query: 174 GHQKEGYGLSW--NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
GH ++W +LS LL+AS D TV LW+ N E V A GH+ V+
Sbjct: 549 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNV---EKNKVKALHCCRGHAGSVDA 719
Query: 232 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHLV 268
+A + F S + D+ L IW T + T P +
Sbjct: 720 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 896
Query: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQ-VHWSPH 327
HT ++ + ++ E + + S D T+ +WD+ + LK T +K +F + +SP
Sbjct: 897 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 1061
Query: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1062CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1205
Query: 388 VICSVSEDNIMQIW 401
+ S S DNI+++W
Sbjct: 1206QLISGSLDNIVKLW 1247
>gb|BC004748.1|BC004748 Mus musculus, WD repeat domain 12, clone MGC:7936 IMAGE:3583955,
mRNA, complete cds
Length = 1512
Score = 79.7 bits (195), Expect = 5e-13
Identities = 53/180 (29%), Positives = 91/180 (50%)
Frame = +3
Query: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
P + L GH + + W+ + + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 939 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESG-------GLKSTLTGNK- 1088
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
V +++ L + L S + D+ + +WD R+ S S + +HT V + ++P E
Sbjct: 1089 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1265
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1266 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1439
Score = 59.3 bits (142), Expect = 7e-07
Identities = 67/254 (26%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +3
Query: 174 GHQKEGYGLSW--NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
GH ++W +LS LL+AS D TV LW+ N E V A GH+ V+
Sbjct: 606 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNV---EKNKVKALHCCRGHAGSVDA 776
Query: 232 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHLV 268
+A + F S + D+ L IW T + T P +
Sbjct: 777 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 953
Query: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQ-VHWSPH 327
HT ++ + ++ E + + S D T+ +WD+ + LK T +K +F + +SP
Sbjct: 954 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 1118
Query: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1119CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1262
Query: 388 VICSVSEDNIMQIW 401
+ S S DNI+++W
Sbjct: 1263QLISGSLDNIVKLW 1304
>gb|AY059432.1| Mus musculus MTA.A10.069 WD repeat domain 12 (Wdr12) mRNA, partial
cds
Length = 650
Score = 79.7 bits (195), Expect = 5e-13
Identities = 53/180 (29%), Positives = 91/180 (50%)
Frame = +2
Query: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
P + L GH + + W+ + + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 101 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESG-------GLKSTLTGNK- 250
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
V +++ L + L S + D+ + +WD R+ S S + +HT V + ++P E
Sbjct: 251 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 427
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 428 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 601
Score = 45.4 bits (106), Expect = 0.010
Identities = 38/142 (26%), Positives = 66/142 (45%), Gaps = 1/142 (0%)
Frame = +2
Query: 261 TSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIF 320
T P + HT ++ + ++ E + + S D T+ +WD+ + LK T +K +F
Sbjct: 92 TRTPLVTLSGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VF 256
Query: 321 Q-VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF 379
+ +SP + LAS TDR + +WD +DG L + HT ++
Sbjct: 257 NCISYSPLCKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSV 400
Query: 380 SWNPNEPWVICSVSEDNIMQIW 401
W+P + S S DNI+++W
Sbjct: 401 KWSPTHEQQLISGSLDNIVKLW 466
>dbj|AB044749.1|AB044749 Homo sapiens mRNA for WDC146, complete cds
Length = 4602
Score = 79.7 bits (195), Expect = 5e-13
Identities = 65/209 (31%), Positives = 92/209 (43%), Gaps = 1/209 (0%)
Frame = +1
Query: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLF-GSVADDQKLM 252
+ SDD TV +WD +E I GH A V+ V WH + GS Q +
Sbjct: 814 TCSDDGTVRIWDFLRCHEE-------RILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIK 972
Query: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 312
WD ++ + H AH V + N ++L T S D L+D+RNLK +L F
Sbjct: 973 FWDPKTGQSLATLH---AHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIRNLKEELQVF 1140
Query: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 372
HK E V W P +E + AS G+D L W +G E+ E G E+ H
Sbjct: 1141RGHKKEATAVAWHPVHEGLFASGGSDGSLLFW---HVGVEK-----EVGGMEM-----AH 1281
Query: 373 TAKISDFSWNPNEPWVICSVSEDNIMQIW 401
I +W+P ++CS S D+ + W
Sbjct: 1282EGMIWSLAWHP-LGHILCSGSNDHTSKFW 1365
Score = 52.4 bits (124), Expect = 8e-05
Identities = 50/255 (19%), Positives = 106/255 (40%), Gaps = 2/255 (0%)
Frame = +1
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
L+ H ++W+ N +L+A V W N ++ +F H + +
Sbjct: 628 LQAHDSPVRAMTWSHN-DMWMLTADHGGYVKYWQSN--------MNNVKMFQAHKEAIRE 780
Query: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
++ ++ F + +DD + IWD ++ H A+V C+ ++P ++ ++ +G
Sbjct: 781 ASFSPT-DNKFATCSDDGTVRIWDF---LRCHEERILRGHGADVKCVDWHP-TKGLVVSG 945
Query: 292 SAD--KTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 349
S D + + WD + + L T +HK+ + +V + + +L +S D ++D+ +
Sbjct: 946 SKDSQQPIKFWDPKTGQ-SLATLHAHKNTVMEVKLNLNGNWLLTAS-RDHLCKLFDIRNL 1119
Query: 350 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYN 409
EE L + GH + + +W+P + S D + W +
Sbjct: 1120KEE-------------LQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVG----- 1245
Query: 410 DEESDVTASELEGQG 424
E +V E+ +G
Sbjct: 1246-VEKEVGGMEMAHEG 1287
>gb|AY059431.1| Mus musculus WD repeat domain 12 (Wdr12) mRNA, complete cds
Length = 1346
Score = 79.7 bits (195), Expect = 5e-13
Identities = 53/180 (29%), Positives = 91/180 (50%)
Frame = +1
Query: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
P + L GH + + W+ + + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 796 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESG-------GLKSTLTGNK- 945
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
V +++ L + L S + D+ + +WD R+ S S + +HT V + ++P E
Sbjct: 946 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1122
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1123LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1296
Score = 59.3 bits (142), Expect = 7e-07
Identities = 67/254 (26%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +1
Query: 174 GHQKEGYGLSW--NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
GH ++W +LS LL+AS D TV LW+ N E V A GH+ V+
Sbjct: 463 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNV---EKNKVKALHCCRGHAGSVDA 633
Query: 232 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHLV 268
+A + F S + D+ L IW T + T P +
Sbjct: 634 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 810
Query: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQ-VHWSPH 327
HT ++ + ++ E + + S D T+ +WD+ + LK T +K +F + +SP
Sbjct: 811 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 975
Query: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 976 CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1119
Query: 388 VICSVSEDNIMQIW 401
+ S S DNI+++W
Sbjct: 1120QLISGSLDNIVKLW 1161
>ref|NM_021312.1| Mus musculus WD repeat domain 12 (Wdr12), mRNA
Length = 1859
Score = 79.7 bits (195), Expect = 5e-13
Identities = 53/180 (29%), Positives = 91/180 (50%)
Frame = +3
Query: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
P + L GH + + W+ + + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 1284 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESG-------GLKSTLTGNK- 1433
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
V +++ L + L S + D+ + +WD R+ S S + +HT V + ++P E
Sbjct: 1434 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1610
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1611 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1784
Score = 59.3 bits (142), Expect = 7e-07
Identities = 67/254 (26%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +3
Query: 174 GHQKEGYGLSW--NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
GH ++W +LS LL+AS D TV LW+ N E V A GH+ V+
Sbjct: 951 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNV---EKNKVKALHCCRGHAGSVDA 1121
Query: 232 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHLV 268
+A + F S + D+ L IW T + T P +
Sbjct: 1122 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 1298
Query: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQ-VHWSPH 327
HT ++ + ++ E + + S D T+ +WD+ + LK T +K +F + +SP
Sbjct: 1299 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 1463
Query: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1464 CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1607
Query: 388 VICSVSEDNIMQIW 401
+ S S DNI+++W
Sbjct: 1608 QLISGSLDNIVKLW 1649
>dbj|AB041608.1|AB041608 Mus musculus brain cDNA, clone MNCb-5414, similar to Mus musculus
nuclear protein Ytm1p mRNA
Length = 1859
Score = 79.7 bits (195), Expect = 5e-13
Identities = 53/180 (29%), Positives = 91/180 (50%)
Frame = +3
Query: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
P + L GH + + W+ + + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 1284 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESG-------GLKSTLTGNK- 1433
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
V +++ L + L S + D+ + +WD R+ S S + +HT V + ++P E
Sbjct: 1434 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1610
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1611 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1784
Score = 59.3 bits (142), Expect = 7e-07
Identities = 67/254 (26%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +3
Query: 174 GHQKEGYGLSW--NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
GH ++W +LS LL+AS D TV LW+ N E V A GH+ V+
Sbjct: 951 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNV---EKNKVKALHCCRGHAGSVDA 1121
Query: 232 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHLV 268
+A + F S + D+ L IW T + T P +
Sbjct: 1122 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 1298
Query: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQ-VHWSPH 327
HT ++ + ++ E + + S D T+ +WD+ + LK T +K +F + +SP
Sbjct: 1299 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 1463
Query: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1464 CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1607
Query: 388 VICSVSEDNIMQIW 401
+ S S DNI+++W
Sbjct: 1608 QLISGSLDNIVKLW 1649
>gb|AF239765.1|AF239765 Mus musculus nuclear protein Ytm1p mRNA, complete cds
Length = 1304
Score = 79.7 bits (195), Expect = 5e-13
Identities = 53/180 (29%), Positives = 91/180 (50%)
Frame = +2
Query: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
P + L GH + + W+ + + SAS DHT+ +WD+ +G K+ TG+
Sbjct: 761 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESG-------GLKSTLTGNK- 910
Query: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
V +++ L + L S + D+ + +WD R+ S S + +HT V + ++P E
Sbjct: 911 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1087
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1088LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1261
Score = 59.3 bits (142), Expect = 7e-07
Identities = 67/254 (26%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +2
Query: 174 GHQKEGYGLSW--NSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
GH ++W +LS LL+AS D TV LW+ N E V A GH+ V+
Sbjct: 428 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNV---EKNKVKALHCCRGHAGSVDA 598
Query: 232 VAWHLLHESLFGSVADDQKLMIWDT-----------------------RSNTTSKPSHLV 268
+A + F S + D+ L IW T + T P +
Sbjct: 599 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 775
Query: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQ-VHWSPH 327
HT ++ + ++ E + + S D T+ +WD+ + LK T +K +F + +SP
Sbjct: 776 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 940
Query: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 941 CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1084
Query: 388 VICSVSEDNIMQIW 401
+ S S DNI+++W
Sbjct: 1085QLISGSLDNIVKLW 1126
>gb|AF029984.1|AF029984 Lycopersicon esculentum COP1 homolog (COP1) mRNA, complete cds
Length = 2373
Score = 79.3 bits (194), Expect = 6e-13
Identities = 60/225 (26%), Positives = 97/225 (42%)
Frame = +1
Query: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 181
H + + ++ + AT S + VFD++ +P C P + + K
Sbjct: 1144 HSANIVSSIEFDRDDELFATAGVSRRIKVFDFSSVVNEP-ADAHC-PVVEMSTRSKLSC- 1314
Query: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 241
LSWN H+ S+ D V +WD+ + + H V + S+
Sbjct: 1315 LSWNKYTKNHIASSDYDGIVTVWDVTTRQSVME-------YEEHEKRAWSVDFSRTEPSM 1473
Query: 242 FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 301
S +DD K+ +W T+ S L A + C+ +NP S +A GSAD + +D
Sbjct: 1474 LVSGSDDCKVKVWCTKQEA----SVLNIDMKANICCVKYNPGSSVHIAVGSADHHIHYYD 1641
Query: 302 LRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 346
LRN +H F H+ + V + +NE LAS+ TD L +WD+
Sbjct: 1642 LRNTSQPVHIFSGHRKAVSYVKFLSNNE--LASASTDSTLRLWDV 1770
>ref|NM_005647.1| Homo sapiens transducin (beta)-like 1 (TBL1), mRNA
Length = 5887
Score = 79.0 bits (193), Expect = 8e-13
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Frame = +2
Query: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 234
H+ + L WN ++LSA D T +WD + G +AK F HSA DV W
Sbjct: 1628 HKGPIFALKWNRK-GNYILSAGVDKTTIIWDAHTG-------EAKQQFPFHSAPALDVDW 1783
Query: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
+ + F S + D + + + +P HT EVN + ++P S +LA+ S D
Sbjct: 1784 Q--NNTTFASCSTDMCIHVCRLGCD---RPVKTFQGHTNEVNAIKWDP-SGMLLASCSDD 1945
Query: 295 KTVALWDLRNLKLKLHTFESHKDEIFQVHWSP--------HNETILASSGTDRRLNVWDL 346
T+ +W ++ ++ +H ++H EI+ + WSP ++ +LAS+ D + +WD+
Sbjct: 1946 MTLKIWSMKQ-EVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDI 2122
Query: 347 SK 348
+
Sbjct: 2123 ER 2128
Score = 69.7 bits (169), Expect = 5e-10
Identities = 63/243 (25%), Positives = 105/243 (42%), Gaps = 7/243 (2%)
Frame = +2
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEG--KIVDAKAIFTGHSAV- 228
LRGH+ E + +WN +S L S S D T +W++N G ++V I G V
Sbjct: 1328 LRGHESEVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 1504
Query: 229 ----VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS 284
V + W+ + +L + + D IW N S + H + L +N
Sbjct: 1505 SNKDVTSLDWN-TNGTLLATGSYDGFARIWTEDGNLAS----TLGQHKGPIFALKWNRKG 1669
Query: 285 EFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 344
+IL+ G DKT +WD + K F H V W N T AS TD ++V
Sbjct: 1670 NYILSAG-VDKTTIIWDAHTGEAK-QQFPFHSAPALDVDW--QNNTTFASCSTDMCIHV- 1834
Query: 345 DLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
++G ++ + + GHT +++ W+P+ ++ S S+D ++IW M
Sbjct: 1835 --CRLGCDRPVKTFQ-----------GHTNEVNAIKWDPS-GMLLASCSDDMTLKIWSMK 1972
Query: 405 ENI 407
+ +
Sbjct: 1973 QEV 1981
Score = 38.5 bits (88), Expect = 1.2
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Frame = +2
Query: 308 KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLF 367
K H+ E+F W+P ++ +LAS D +W+L+ E++ G +L+
Sbjct: 1316 KATVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLN--------ENSNGGSTQLVL 1468
Query: 368 IH----GGH----TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 407
H GGH ++ WN N ++ + S D +IW N+
Sbjct: 1469 RHCIREGGHDVPSNKDVTSLDWNTNGT-LLATGSYDGFARIWTEDGNL 1609
Score = 36.2 bits (82), Expect = 5.9
Identities = 50/173 (28%), Positives = 73/173 (41%), Gaps = 28/173 (16%)
Frame = +2
Query: 159 KPDPSG----ECNPDLRLR--------------GHQKEGYGLSW--------NSNLSGHL 192
K DPSG C+ D+ L+ H KE Y + W N N + L
Sbjct: 1901 KWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIML 2080
Query: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
SAS D TV LWDI G T H V VA+ + L S + D+ +
Sbjct: 2081 ASASFDSTVRLWDIERGV-------CTHTLTKHQEPVYSVAFSPDGKYL-ASGSFDKCVH 2236
Query: 253 IWDTRSNTTSKPSHLVDAH--TAEVNCLSFNPYSEFILATGSADKTVALWDLR 303
IW+T+S +LV ++ T + + +N + + A+ S D +V + DLR
Sbjct: 2237 IWNTQS------GNLVHSYRGTGGIFEVCWNARGDKVGASAS-DGSVCVLDLR 2374
>emb|Y12781.1|HSTBL1 Homo sapiens mRNA for transducin (beta) like 1 protein
Length = 5887
Score = 79.0 bits (193), Expect = 8e-13
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Frame = +2
Query: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 234
H+ + L WN ++LSA D T +WD + G +AK F HSA DV W
Sbjct: 1628 HKGPIFALKWNRK-GNYILSAGVDKTTIIWDAHTG-------EAKQQFPFHSAPALDVDW 1783
Query: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
+ + F S + D + + + +P HT EVN + ++P S +LA+ S D
Sbjct: 1784 Q--NNTTFASCSTDMCIHVCRLGCD---RPVKTFQGHTNEVNAIKWDP-SGMLLASCSDD 1945
Query: 295 KTVALWDLRNLKLKLHTFESHKDEIFQVHWSP--------HNETILASSGTDRRLNVWDL 346
T+ +W ++ ++ +H ++H EI+ + WSP ++ +LAS+ D + +WD+
Sbjct: 1946 MTLKIWSMKQ-EVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDI 2122
Query: 347 SK 348
+
Sbjct: 2123 ER 2128
Score = 69.7 bits (169), Expect = 5e-10
Identities = 63/243 (25%), Positives = 105/243 (42%), Gaps = 7/243 (2%)
Frame = +2
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEG--KIVDAKAIFTGHSAV- 228
LRGH+ E + +WN +S L S S D T +W++N G ++V I G V
Sbjct: 1328 LRGHESEVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 1504
Query: 229 ----VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS 284
V + W+ + +L + + D IW N S + H + L +N
Sbjct: 1505 SNKDVTSLDWN-TNGTLLATGSYDGFARIWTEDGNLAS----TLGQHKGPIFALKWNRKG 1669
Query: 285 EFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 344
+IL+ G DKT +WD + K F H V W N T AS TD ++V
Sbjct: 1670 NYILSAG-VDKTTIIWDAHTGEAK-QQFPFHSAPALDVDW--QNNTTFASCSTDMCIHV- 1834
Query: 345 DLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
++G ++ + + GHT +++ W+P+ ++ S S+D ++IW M
Sbjct: 1835 --CRLGCDRPVKTFQ-----------GHTNEVNAIKWDPS-GMLLASCSDDMTLKIWSMK 1972
Query: 405 ENI 407
+ +
Sbjct: 1973 QEV 1981
Score = 38.5 bits (88), Expect = 1.2
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Frame = +2
Query: 308 KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLF 367
K H+ E+F W+P ++ +LAS D +W+L+ E++ G +L+
Sbjct: 1316 KATVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLN--------ENSNGGSTQLVL 1468
Query: 368 IH----GGH----TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 407
H GGH ++ WN N ++ + S D +IW N+
Sbjct: 1469 RHCIREGGHDVPSNKDVTSLDWNTNGT-LLATGSYDGFARIWTEDGNL 1609
Score = 36.2 bits (82), Expect = 5.9
Identities = 50/173 (28%), Positives = 73/173 (41%), Gaps = 28/173 (16%)
Frame = +2
Query: 159 KPDPSG----ECNPDLRLR--------------GHQKEGYGLSW--------NSNLSGHL 192
K DPSG C+ D+ L+ H KE Y + W N N + L
Sbjct: 1901 KWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIML 2080
Query: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
SAS D TV LWDI G T H V VA+ + L S + D+ +
Sbjct: 2081 ASASFDSTVRLWDIERGV-------CTHTLTKHQEPVYSVAFSPDGKYL-ASGSFDKCVH 2236
Query: 253 IWDTRSNTTSKPSHLVDAH--TAEVNCLSFNPYSEFILATGSADKTVALWDLR 303
IW+T+S +LV ++ T + + +N + + A+ S D +V + DLR
Sbjct: 2237 IWNTQS------GNLVHSYRGTGGIFEVCWNARGDKVGASAS-DGSVCVLDLR 2374
>ref|XM_010334.6| Homo sapiens similar to transducin (beta)-like 1 (H. sapiens)
(LOC159035), mRNA
Length = 5839
Score = 79.0 bits (193), Expect = 8e-13
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Frame = +3
Query: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 234
H+ + L WN ++LSA D T +WD + G +AK F HSA DV W
Sbjct: 1596 HKGPIFALKWNRK-GNYILSAGVDKTTIIWDAHTG-------EAKQQFPFHSAPALDVDW 1751
Query: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
+ + F S + D + + + +P HT EVN + ++P S +LA+ S D
Sbjct: 1752 Q--NNTTFASCSTDMCIHVCRLGCD---RPVKTFQGHTNEVNAIKWDP-SGMLLASCSDD 1913
Query: 295 KTVALWDLRNLKLKLHTFESHKDEIFQVHWSP--------HNETILASSGTDRRLNVWDL 346
T+ +W ++ ++ +H ++H EI+ + WSP ++ +LAS+ D + +WD+
Sbjct: 1914 MTLKIWSMKQ-EVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDI 2090
Query: 347 SK 348
+
Sbjct: 2091 ER 2096
Score = 69.7 bits (169), Expect = 5e-10
Identities = 63/243 (25%), Positives = 105/243 (42%), Gaps = 7/243 (2%)
Frame = +3
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEG--KIVDAKAIFTGHSAV- 228
LRGH+ E + +WN +S L S S D T +W++N G ++V I G V
Sbjct: 1296 LRGHESEVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 1472
Query: 229 ----VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYS 284
V + W+ + +L + + D IW N S + H + L +N
Sbjct: 1473 SNKDVTSLDWN-TNGTLLATGSYDGFARIWTEDGNLAS----TLGQHKGPIFALKWNRKG 1637
Query: 285 EFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVW 344
+IL+ G DKT +WD + K F H V W N T AS TD ++V
Sbjct: 1638 NYILSAG-VDKTTIIWDAHTGEAK-QQFPFHSAPALDVDW--QNNTTFASCSTDMCIHV- 1802
Query: 345 DLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
++G ++ + + GHT +++ W+P+ ++ S S+D ++IW M
Sbjct: 1803 --CRLGCDRPVKTFQ-----------GHTNEVNAIKWDPS-GMLLASCSDDMTLKIWSMK 1940
Query: 405 ENI 407
+ +
Sbjct: 1941 QEV 1949
Score = 38.5 bits (88), Expect = 1.2
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Frame = +3
Query: 308 KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLF 367
K H+ E+F W+P ++ +LAS D +W+L+ E++ G +L+
Sbjct: 1284 KATVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLN--------ENSNGGSTQLVL 1436
Query: 368 IH----GGH----TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 407
H GGH ++ WN N ++ + S D +IW N+
Sbjct: 1437 RHCIREGGHDVPSNKDVTSLDWNTNGT-LLATGSYDGFARIWTEDGNL 1577
Score = 36.2 bits (82), Expect = 5.9
Identities = 50/173 (28%), Positives = 73/173 (41%), Gaps = 28/173 (16%)
Frame = +3
Query: 159 KPDPSG----ECNPDLRLR--------------GHQKEGYGLSW--------NSNLSGHL 192
K DPSG C+ D+ L+ H KE Y + W N N + L
Sbjct: 1869 KWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIML 2048
Query: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
SAS D TV LWDI G T H V VA+ + L S + D+ +
Sbjct: 2049 ASASFDSTVRLWDIERGV-------CTHTLTKHQEPVYSVAFSPDGKYL-ASGSFDKCVH 2204
Query: 253 IWDTRSNTTSKPSHLVDAH--TAEVNCLSFNPYSEFILATGSADKTVALWDLR 303
IW+T+S +LV ++ T + + +N + + A+ S D +V + DLR
Sbjct: 2205 IWNTQS------GNLVHSYRGTGGIFEVCWNARGDKVGASAS-DGSVCVLDLR 2342
>ref|XM_092154.1| Homo sapiens similar to F-box protein FBW7, isoform 2; hypothetical
protein FLJ11071; archipelago, Drosophila, homolog of;
F-box protein FBW7; F-box protein SEL-10; homolog of C
elegans sel-10 (LOC164781), mRNA
Length = 1341
Score = 78.2 bits (191), Expect = 1e-12
Identities = 64/218 (29%), Positives = 101/218 (45%), Gaps = 3/218 (1%)
Frame = +1
Query: 187 NLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVA 246
+L ++ S D T LWD +G + + GH VV +A++ + + +
Sbjct: 55 DLGPSFITGSYDRTCKLWDTASGEELNTL-------EGHRNVVYAIAFNNPYGDKIATGS 213
Query: 247 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 306
D+ +W T K H HTAE+ CLSFNP S ++ATGS D T LWD++N +
Sbjct: 214 FDKTCKLWSVE---TGKCYHTFRGHTAEIVCLSFNPQST-LVATGSMDTTAKLWDIQNGE 381
Query: 307 LKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELL 366
+++T H EI + ++ + I+ S D + VW DA+ G +
Sbjct: 382 -EVYTLRGHSAEIISLSFNTSGDRIITGS-FDHTVVVW------------DADTGRKVNI 519
Query: 367 FIHGGHTAKISDFSWNPNEPW---VICSVSEDNIMQIW 401
I GH A+IS S+N W +I + S D ++W
Sbjct: 520 LI--GHCAEISSASFN----WDCSLILTGSMDKTCKLW 615
Score = 63.5 bits (153), Expect = 3e-08
Identities = 66/233 (28%), Positives = 101/233 (43%), Gaps = 4/233 (1%)
Frame = +1
Query: 173 RGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFT--GHSAVVE 230
RGH E LS+N S + + S D T LWDI G + ++T GHSA +
Sbjct: 271 RGHTAEIVCLSFNPQ-STLVATGSMDTTAKLWDIQNGEE---------VYTLRGHSAEII 420
Query: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
++++ + + + D +++WD T + +++ H AE++ SFN IL T
Sbjct: 421 SLSFNTSGDRIITG-SFDHTVVVWDA---DTGRKVNILIGHCAEISSASFNWDCSLIL-T 585
Query: 291 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS--GTDRRLNVWDLSK 348
GS DKT LWD N K + T H DEI + + I +S GT R +
Sbjct: 586 GSMDKTCKLWDATNGKC-VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKC 762
Query: 349 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
I + + GH +IS S+NP ++ S D +IW
Sbjct: 763 IAKLE-----------------GHEGEISKISFNPQGNHLLTG-SSDKTARIW 867
Score = 60.8 bits (146), Expect = 2e-07
Identities = 52/184 (28%), Positives = 77/184 (41%), Gaps = 35/184 (19%)
Frame = +1
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEG------------------ 213
LRGH E LS+N++ +++ S DHTV +WD + G K
Sbjct: 394 LRGHSAEIISLSFNTS-GDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDC 570
Query: 214 ------------KIVDAK-----AIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDT 256
K+ DA A TGH + D + + + + AD +
Sbjct: 571 SLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIF--- 741
Query: 257 RSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK 316
S T K ++ H E++ +SFNP +L TGS+DKT +WD + + L E H
Sbjct: 742 -SAATRKCIAKLEGHEGEISKISFNPQGNHLL-TGSSDKTARIWDAQTGQC-LQVLEGHT 912
Query: 317 DEIF 320
DEIF
Sbjct: 913 DEIF 924
>emb|X61480.1|DDCORONIN D.discoideum mRNA for coronin
Length = 1430
Score = 78.2 bits (191), Expect = 1e-12
Identities = 52/175 (29%), Positives = 86/175 (48%), Gaps = 12/175 (6%)
Frame = +1
Query: 183 SWNSNLSGHLLSASDDHTVCLWDINAG------PKE--GKIVDAKAIFTGHSAVVEDVAW 234
+W+SN ++A+ + +WD G P E GK +F GH + V D+A+
Sbjct: 103 AWDSNY----VAANTRYFGVIWDAAGGGSFAVIPHEASGKTTSVP-LFNGHKSAVLDIAF 267
Query: 235 HLLHESLFGSVADDQKLMIWDT----RSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
H +E+L GSV++D + IW +++ S P + H +V +SF P ++ + T
Sbjct: 268 HPFNENLVGSVSEDCNICIWGIPEGGLTDSISTPLQTLSGHKRKVGTISFGPVADNVAVT 447
Query: 291 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
S D V WD+ K L T E H D I W+ HN + + ++ D++ V+D
Sbjct: 448 SSGDFLVKTWDVEQGK-NLTTVEGHSDMITSCEWN-HNGSQIVTTCKDKKARVFD 606
Score = 46.2 bits (108), Expect = 0.006
Identities = 31/162 (19%), Positives = 66/162 (40%), Gaps = 6/162 (3%)
Frame = +1
Query: 255 DTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR------NLKLK 308
+ TTS P L + H + V ++F+P++E ++ + S D + +W + ++
Sbjct: 196 EASGKTTSVP--LFNGHKSAVLDIAFHPFNENLVGSVSEDCNICIWGIPEGGLTDSISTP 369
Query: 309 LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI 368
L T HK ++ + + P + + +S D + WD+ + + E
Sbjct: 370 LQTLSGHKRKVGTISFGPVADNVAVTSSGDFLVKTWDVEQGKNLTTVE------------ 513
Query: 369 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYND 410
GH+ I+ WN N ++ + + +I N+
Sbjct: 514 --GHSDMITSCEWNHNGSQIVTTCKDKKARVFDPRTNSIVNE 633
Score = 38.1 bits (87), Expect = 1.6
Identities = 30/118 (25%), Positives = 51/118 (42%), Gaps = 4/118 (3%)
Frame = +1
Query: 312 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGG 371
F HK + + + P NE ++ S D + +W + E D+ P + L G
Sbjct: 229 FNGHKSAVLDIAFHPFNENLVGSVSEDCNICIWGI----PEGGLTDSISTPLQTL---SG 387
Query: 372 HTAKISDFSWNPNEPWVICSVSEDNIMQIW--QMAENIYNDE-ESD-VTASELEGQGS 425
H K+ S+ P V + S D +++ W + +N+ E SD +T+ E GS
Sbjct: 388 HKRKVGTISFGPVADNVAVTSSGDFLVKTWDVEQGKNLTTVEGHSDMITSCEWNHNGS 561
>gb|AF025330.1|AF025330 Danio rerio receptor for activated protein kinase C (RACK1) mRNA,
complete cds
Length = 1069
Score = 77.8 bits (190), Expect = 2e-12
Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 1/291 (0%)
Frame = +1
Query: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 181
H G V + PQ P +I + + ++++ T+ D + P LRGH
Sbjct: 97 HSGWVTQIATTPQFPDMILSASRDKTIIMWKLTR-----DETNYGIPQRALRGHSHFVSD 261
Query: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 241
+ +S+ LS S D T+ LWD+ G + F GH+ V VA+ + +
Sbjct: 262 VVISSD-GQFALSGSWDGTLRLWDLTTGTTTRR-------FVGHTKDVLSVAFSADNRQI 417
Query: 242 FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF-ILATGSADKTVALW 300
S + D+ + +W+T K + D+HT V+C+ F+P S I+ + DK V +W
Sbjct: 418 V-SGSRDKTIKLWNTLG--VCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVW 588
Query: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
+L N KLK + H + V SP + ++ AS G D + +WDL++
Sbjct: 589 NLANCKLKTNHI-GHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNE------------ 726
Query: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 411
L + GG T I+ ++PN W +C+ + +I +IW + I DE
Sbjct: 727 -GKHLYTLDGGDT--INALCFSPNRYW-LCAATGPSI-KIWDLEGKIIVDE 864
>ref|NM_101904.1| hypothetical protein
Length = 1140
Score = 77.8 bits (190), Expect = 2e-12
Identities = 55/219 (25%), Positives = 92/219 (41%), Gaps = 5/219 (2%)
Frame = +1
Query: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 241
L W S L+S D+ + LW ++ K +++ + HS + AW H+
Sbjct: 463 LWWPSGRCDKLISI-DEQNIFLWSLDCSKKSAEVLSKDSAGMLHS--LSGGAWDP-HDVN 630
Query: 242 FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 301
+ + + WD R T K + + AH V+ +NP E IL T + + +WD
Sbjct: 631 AVAATGESSVQFWDLR--TMKKVNSIEHAHVRGVD---YNPKREHILVTAEDESGIHVWD 795
Query: 302 LRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG-----EEQSAE 356
LR K+ + H + V +P + ++ S+GTD +N+W S E E
Sbjct: 796 LRKAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLWYASATSSDDKTSESPVE 975
Query: 357 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 395
LL + + + +W+ EPWV S+S D
Sbjct: 976 STRQRVNPLLNSYTDYEDSVYGLAWSSREPWVFASLSYD 1092
Score = 43.5 bits (101), Expect = 0.037
Identities = 43/173 (24%), Positives = 82/173 (46%), Gaps = 5/173 (2%)
Frame = +1
Query: 247 DDQKLMIWDTRSNTTSKPSHLVDAHTAEV-NCLS---FNPYS-EFILATGSADKTVALWD 301
D+Q + +W + + K + ++ +A + + LS ++P+ + ATG + +V WD
Sbjct: 505 DEQNIFLWSL--DCSKKSAEVLSKDSAGMLHSLSGGAWDPHDVNAVAATG--ESSVQFWD 672
Query: 302 LRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDG 361
LR +K K+++ E + V ++P E IL ++ + ++VWDL K A+
Sbjct: 673 LRTMK-KVNSIEHA--HVRGVDYNPKREHILVTAEDESGIHVWDLRK---------AKVP 816
Query: 362 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESD 414
EL GHT NP +I S D+++ +W + +D+ S+
Sbjct: 817 VQEL----PGHTHWTWAVRCNPEYDGLILSAGTDSVVNLWYASATSSDDKTSE 963
Score = 39.7 bits (91), Expect = 0.53
Identities = 27/142 (19%), Positives = 55/142 (38%), Gaps = 6/142 (4%)
Frame = +1
Query: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVH---- 323
+DAH ++NC+ + P ++ + LW L K KD +H
Sbjct: 430 LDAHVGKINCVLWWPSGRCDKLISIDEQNIFLWSLDCSKKSAEVLS--KDSAGMLHSLSG 603
Query: 324 --WSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
W PH+ +A++G + + WDL + + S E A + +
Sbjct: 604 GAWDPHDVNAVAATG-ESSVQFWDLRTMKKVNSIEHAH----------------VRGVDY 732
Query: 382 NPNEPWVICSVSEDNIMQIWQM 403
NP ++ + +++ + +W +
Sbjct: 733 NPKREHILVTAEDESGIHVWDL 798
Score = 38.5 bits (88), Expect = 1.2
Identities = 35/149 (23%), Positives = 56/149 (37%), Gaps = 14/149 (9%)
Frame = +1
Query: 119 KIN--HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQ 176
K+N V Y P+ HI+ T S + V+D K P L GH
Sbjct: 688 KVNSIEHAHVRGVDYNPKREHILVTAEDESGIHVWDLRKAKV---------PVQELPGHT 840
Query: 177 KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA------------IFTG 224
+ + N G +LSA D V LW +A + K ++ +T
Sbjct: 841 HWTWAVRCNPEYDGLILSAGTDSVVNLWYASATSSDDKTSESPVESTRQRVNPLLNSYTD 1020
Query: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMI 253
+ V +AW +F S++ D +++I
Sbjct: 1021YEDSVYGLAWSSREPWVFASLSYDGRVII 1107
>gb|U49437.1|BGU49437 Biomphalaria glabrata RACK mRNA, complete cds
Length = 1235
Score = 77.8 bits (190), Expect = 2e-12
Identities = 76/291 (26%), Positives = 131/291 (44%), Gaps = 1/291 (0%)
Frame = +2
Query: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 181
H G V + PQ P +I + + ++V+ T+ D S P L GH
Sbjct: 101 HGGWVTQIATTPQYPDMILSASRDKSLIVWRLTR-----DESSYGVPQKSLHGHGHFVSD 265
Query: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESL 241
+ +S+ LS S DHT+ LWD++ G + F GH+ V VA+ + +
Sbjct: 266 VILSSD-GQFALSGSWDHTLRLWDLSTGQTTRR-------FVGHTKDVLSVAFSADNRQI 421
Query: 242 FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF-ILATGSADKTVALW 300
S + D+ + +W+T K + D HT +C+ F+P ++ I+ + D+ V +W
Sbjct: 422 V-SGSRDKTIKLWNTLG--VCKYTIQDDCHTDWTSCVRFSPNTQNPIIVSSGWDRLVKVW 592
Query: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 360
+L N KLK + + H + V SP + ++ AS G D + +WDL++ + + A D
Sbjct: 593 NLTNCKLKTNHY-GHTGYVNTVTVSP-DGSLCASGGKDSQAMLWDLNEGKHLYTLDGAGD 766
Query: 361 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 411
I+ ++PN W +C S +I +IW + + DE
Sbjct: 767 --------------TINALCFSPNRYW-LCVASGPSI-KIWDLEGKVVVDE 871
>ref|NM_064584.1| six WD40 repeats
Length = 2430
Score = 77.4 bits (189), Expect = 2e-12
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 1/223 (0%)
Frame = +1
Query: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLF-GSVADDQKLM 252
+ASDD T +WD +E + GH A V + WH + GS Q +
Sbjct: 700 TASDDGTARVWDFARYTEE-------RVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVK 858
Query: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTF 312
IWD +S + + H + V + FN ++L TG D V ++D+R +K ++ T+
Sbjct: 859 IWDPKSGSCLAT---LQEHKSSVMAVEFNKNGNWLL-TGGRDHLVKMYDIRMMK-EMRTY 1023
Query: 313 ESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH 372
+HK E+ + W P +E + S G D + W + DG E+ + H
Sbjct: 1024RAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMV-------------DGEKEIGLLEHAH 1164
Query: 373 TAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDV 415
I W+P ++ + S DN + W A N D D+
Sbjct: 1165DQAIWSMKWHP-LGHILATGSNDNNTKFW--ARNRPGDTVEDI 1284
>ref|NM_118006.1| putative protein
Length = 1386
Score = 76.6 bits (187), Expect = 4e-12
Identities = 62/214 (28%), Positives = 95/214 (43%), Gaps = 5/214 (2%)
Frame = +1
Query: 137 HIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSAS 196
+I+A+ + V V+D +G C + + H KE ++WN LLS S
Sbjct: 739 NILASASADKKVKVWDVA--------TGTCK--ITMEHHTKEVQAVAWNHYAPEVLLSGS 888
Query: 197 DDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDT 256
D TV L K+G+ + VE +AW E F +D + +D
Sbjct: 889 FDQTVVL-------KDGRQPSHSGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDV 1047
Query: 257 R----SNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-LHT 311
R S + S PS ++ H +S+N + +LATGS D+TV LWDL N + + T
Sbjct: 1048RQASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIAT 1227
Query: 312 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 345
+ +F + +SP N +LA G L +WD
Sbjct: 1228HNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLWD 1329
Score = 71.2 bits (173), Expect = 2e-10
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Frame = +1
Query: 190 GHLLSASDDHT--VCLWDINAG------------PKEGKIVDAKAIFTGHSAVVEDVAWH 235
G+ L+ D T + +WD++A KEG H+ V +AW+
Sbjct: 562 GNFLAVGSDGTPTIEIWDLDAWFDMLPCVQLGGQNKEGNYKQGS-----HTRSVLGLAWN 726
Query: 236 LLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADK 295
++ S + D+K+ +WD + T ++ HT EV +++N Y+ +L +GS D+
Sbjct: 727 KEFRNILASASADKKVKVWDVATGTCKIT---MEHHTKEVQAVAWNHYAPEVLLSGSFDQ 897
Query: 296 TVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSA 355
TV L D R + D + + W PH+E S D + +D+ Q++
Sbjct: 898 TVVLKDGRQPSHSGFKWSVMSD-VESLAWDPHSEHSFVVSLEDGTVKGFDV-----RQAS 1059
Query: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 406
A + P F GH + S+N + P ++ + S+D +++W ++ N
Sbjct: 1060ISASESNPS--FTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNN 1206
>dbj|AP003592.1|AP003592 Nostoc sp. PCC 7120 DNA, complete genome, section 12/19
Length = 348250
Score = 76.6 bits (187), Expect = 4e-12
Identities = 57/212 (26%), Positives = 105/212 (48%)
Frame = +3
Query: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
L S D T+ LW++ G + + GHS V VA+ ++L S + D+ +
Sbjct: 4686 LASTGADKTIKLWNLATGKEIRHL-------KGHSQGVASVAFSPDGKTL-ASGSLDKTI 4841
Query: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT 311
+W+ T K + H++ V ++F+P + LA+GS DKT+ LW+L K+ +HT
Sbjct: 4842 KLWNP---ATGKEIRTLQEHSSGVANVAFSPDGK-TLASGSWDKTIKLWNLTTSKV-IHT 5006
Query: 312 FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGG 371
+ H D + V ++ ++T LAS D+ + +W+LS ++ G
Sbjct: 5007 LKGHSDLVMSVAFNSDSQT-LASGSKDKTIKLWNLSTGKTIRTLR--------------G 5141
Query: 372 HTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
H+ K++ ++ P + V+ S S DN +++W +
Sbjct: 5142 HSDKVNSVAYVPRDSTVLASGSNDNTIKLWNL 5237
Score = 73.2 bits (178), Expect = 4e-11
Identities = 42/133 (31%), Positives = 71/133 (52%), Gaps = 5/133 (3%)
Frame = +3
Query: 256 TRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESH 315
T+ + S + + H ++VN ++F+P EF LA+GS DKT+ +W+L+N K K+HT H
Sbjct: 4467 TKFSEISTQPYTLKGHASDVNSVAFSPNGEF-LASGSDDKTIKVWNLKN-KQKIHTLPGH 4640
Query: 316 KDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAK 375
++ + +SP +T LAS+G D+ + +W+L+ E + + G + F G T
Sbjct: 4641 SGWVWAIAFSPDGKT-LASTGADKTIKLWNLATGKEIRHLKGHSQGVASVAFSPDGKTLA 4817
Query: 376 ISDFS-----WNP 383
WNP
Sbjct: 4818 SGSLDKTIKLWNP 4856
Score = 73.2 bits (178), Expect = 4e-11
Identities = 55/176 (31%), Positives = 93/176 (52%)
Frame = +3
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
L+GH + ++++ + L S S D T+ LW+ P GK + HS+ V +
Sbjct: 4755 LKGHSQGVASVAFSPD-GKTLASGSLDKTIKLWN----PATGKEIRT---LQEHSSGVAN 4910
Query: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
VA+ ++L S + D+ + +W+ TTSK H + H+ V ++FN S+ LA+G
Sbjct: 4911 VAFSPDGKTL-ASGSWDKTIKLWNL---TTSKVIHTLKGHSDLVMSVAFNSDSQ-TLASG 5075
Query: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
S DKT+ LW+L K + T H D++ V + P + T+LAS D + +W+L+
Sbjct: 5076 SKDKTIKLWNLSTGKT-IRTLRGHSDKVNSVAYVPRDSTVLASGSNDNTIKLWNLT 5240
Score = 66.6 bits (161), Expect = 4e-09
Identities = 57/233 (24%), Positives = 110/233 (46%), Gaps = 3/233 (1%)
Frame = -1
Query: 192 LLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
L +ASDD T+ LW + P ++ GH+ V+ V++ + + S + D+++
Sbjct: 65101 LATASDDKTIKLWHL---PTSSEVF----TLNGHTNPVKSVSFS-PNGQILASGSWDKQV 64946
Query: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK--- 308
+WD TT K + + AH +V+ ++F+P E ILA+ S D+T+ LW + +
Sbjct: 64945 KLWDV---TTGKEIYALKAHQLQVSAVAFSPQGE-ILASASFDRTIRLWQITQNHPRYTL 64778
Query: 309 LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI 368
+ T H + + +SP + ILA+ D + +WD++ +L+
Sbjct: 64777 IKTLSGHTRAVLAIAFSPDGK-ILATGSDDNTIKLWDIN--------------TGQLIAT 64643
Query: 369 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELE 421
GH+ + ++ + +I S S D +++W+++ EE AS L+
Sbjct: 64642 LLGHSWSVVAVTFTADNKTLI-SASWDKTIKLWKVS----TTEEIVTLASHLD 64499
Score = 66.2 bits (160), Expect = 5e-09
Identities = 47/163 (28%), Positives = 82/163 (49%)
Frame = -1
Query: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303
S DD+ + +W+ T K H+ V +SF+P E ILAT S DKT+ LW L
Sbjct: 65221 SGGDDKIIRLWELN---TQKLLACFSGHSQAVTSVSFSPQGE-ILATASDDKTIKLWHLP 65054
Query: 304 NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPP 363
++ T H + + V +SP N ILAS D+++ +WD++ G+E
Sbjct: 65053 T-SSEVFTLNGHTNPVKSVSFSP-NGQILASGSWDKQVKLWDVT-TGKE----------- 64916
Query: 364 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 406
++ H ++S +++P + ++ S S D +++WQ+ +N
Sbjct: 64915 --IYALKAHQLQVSAVAFSP-QGEILASASFDRTIRLWQITQN 64796
Score = 65.5 bits (158), Expect = 9e-09
Identities = 65/234 (27%), Positives = 107/234 (44%), Gaps = 2/234 (0%)
Frame = -1
Query: 172 LRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 230
L GH +S++ N G +L S S D V LWD+ G + I KA H V
Sbjct: 65032 LNGHTNPVKSVSFSPN--GQILASGSWDKQVKLWDVTTGKE---IYALKA----HQLQVS 64880
Query: 231 DVAWHLLHESLFGSVADDQKLMIWD-TRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 289
VA+ E L S + D+ + +W T+++ + HT V ++F+P + ILA
Sbjct: 64879 AVAFSPQGEIL-ASASFDRTIRLWQITQNHPRYTLIKTLSGHTRAVLAIAFSPDGK-ILA 64706
Query: 290 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 349
TGS D T+ LWD+ +L + T H + V ++ N+T++++S D+ + +W +S
Sbjct: 64705 TGSDDNTIKLWDINTGQL-IATLLGHSWSVVAVTFTADNKTLISAS-WDKTIKLWKVSTT 64532
Query: 350 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
E + H + + NP VI S S D +++WQ+
Sbjct: 64531 EE--------------IVTLASHLDSVCAVAVNP-VTQVIASSSRDKTIKLWQL 64415
Score = 50.1 bits (118), Expect = 4e-04
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 2/194 (1%)
Frame = -1
Query: 111 TGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTK-HPAKPDPSGECNPD 169
TGK +K H+ +V+ + PQ I+A+ + + ++ T+ HP
Sbjct: 64927 TGKEIYALKA-HQLQVSAVAFSPQG-EILASASFDRTIRLWQITQNHP-------RYTLI 64775
Query: 170 LRLRGHQKEGYGLSWNSNLSGHLLSA-SDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAV 228
L GH + ++++ + G +L+ SDD+T+ LWDIN G A GHS
Sbjct: 64774 KTLSGHTRAVLAIAFSPD--GKILATGSDDNTIKLWDINTG-------QLIATLLGHSWS 64622
Query: 229 VEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFIL 288
V V + +++L S + D+ + +W +T++ + +H V ++ NP ++ ++
Sbjct: 64621 VVAVTFTADNKTLI-SASWDKTIKLWKV---STTEEIVTLASHLDSVCAVAVNPVTQ-VI 64457
Query: 289 ATGSADKTVALWDL 302
A+ S DKT+ LW L
Sbjct: 64456 ASSSRDKTIKLWQL 64415
>dbj|AB022686.1|AB022686 Lycopersicon esculentum mRNA for LeArcA1 protein, complete cds
Length = 1197
Score = 75.9 bits (185), Expect = 7e-12
Identities = 77/275 (28%), Positives = 132/275 (48%), Gaps = 6/275 (2%)
Frame = +1
Query: 135 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK--EGYGLSWNSNLSGHL 192
N +I T + ++V+ TK D S P RL GH E LS + +
Sbjct: 127 NSDMIVTSSRDKSIIVWSLTK-----DGSQYGVPRRRLTGHGHFVEDVVLSSDGMFA--- 282
Query: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
LS S D + LWD+ AG + F GH+ V VA+ + + + S + D+ +
Sbjct: 283 LSGSWDGELRLWDLQAGTTARR-------FVGHTKDVLSVAFSVDNRQIV-SASRDKTIK 438
Query: 253 IWDTRSNTTSKPSHLV---DAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLRNLKLK 308
+W NT + + + D+H+ V+C+ F+P + + + +GS D+TV +W+L N KL+
Sbjct: 439 LW----NTLGECKYTIQEQDSHSDWVSCVRFSPNNLQPTIVSGSWDRTVKIWNLTNCKLR 606
Query: 309 LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFI 368
T H + V SP + ++ AS G D + +WDL++ G++ + DA
Sbjct: 607 -STLAGHSGYVNTVAVSP-DGSLCASGGKDGVILLWDLAE-GKKLYSLDA---------- 747
Query: 369 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
+ I F ++PN W +C+ +E +I +IW +
Sbjct: 748 ----GSIIHTFCFSPNRYW-LCAATESSI-KIWDL 834
>ref|NM_057921.1| Drosophila melanogaster Receptor of activated protein kinase C 1
(Rack1), transcript variant Rack1-P1|CDS, mRNA
Length = 957
Score = 75.5 bits (184), Expect = 9e-12
Identities = 74/286 (25%), Positives = 129/286 (44%), Gaps = 1/286 (0%)
Frame = +1
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
I H G V + P++P I + + ++V+ T+ + + P RL GH
Sbjct: 34 IGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRD----EDTNYGYPQKRLYGHSHFI 201
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
+ +S+ + LS S D T+ LWD+ AG + F GH+ V VA+ +
Sbjct: 202 SDVVLSSD-GNYALSGSWDQTLRLWDLAAGKTTRR-------FEGHTKDVLSVAFSADNR 357
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP-YSEFILATGSADKTVA 298
+ S + D+ + +W+T + K + D HT V+C+ F+P +S I+ + D+TV
Sbjct: 358 QIV-SGSRDKTIKLWNTLAEC--KFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVK 528
Query: 299 LWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 358
+W+L N KLK + H + V SP + ++ S G D + +WDL+ + E
Sbjct: 529 VWNLANCKLK-NNHHGHNGYLNTVTVSP-DGSLCTSGGKDSKALLWDLNDGKNLYTLE-- 696
Query: 359 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
H I+ ++PN W+ V+ ++IW +A
Sbjct: 697 -------------HNDIINALCFSPNRYWL--CVAYGPSIKIWDLA 789
>dbj|AP003588.1|AP003588 Nostoc sp. PCC 7120 DNA, complete genome, section 8/19
Length = 334520
Score = 75.5 bits (184), Expect = 9e-12
Identities = 60/212 (28%), Positives = 103/212 (48%)
Frame = -3
Query: 191 HLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQK 250
+L SAS DH++ LWD +G TGHSA V V + +++ + ++D+
Sbjct: 131883 NLASASSDHSIKLWDTTSG-------QLLMTLTGHSAGVITVRFSPDGQTI-AAGSEDKT 131728
Query: 251 LMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH 310
+ +W + K ++ H VN LSF+P + LA+ SADKT+ LW + + KL +
Sbjct: 131727 VKLWHRQDGKLLK---TLNGHQDWVNSLSFSPDGK-TLASASADKTIKLWRIADGKL-VK 131563
Query: 311 TFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHG 370
T + H D ++ V++S + I AS+ D + +W+ I E
Sbjct: 131562 TLKGHNDSVWDVNFSSDGKAI-ASASRDNTIKLWNRHGIELETFT--------------- 131431
Query: 371 GHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
GH+ + ++ P+ +I S S DN +++WQ
Sbjct: 131430 GHSGGVYAVNFLPDSN-IIASASLDNTIRLWQ 131338
Score = 75.5 bits (184), Expect = 9e-12
Identities = 67/227 (29%), Positives = 115/227 (50%), Gaps = 3/227 (1%)
Frame = -3
Query: 180 YGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAKAIFT--GHSAVVEDVAWHL 236
YG+S+ G L+ SA+ D TV +W ++ D KA+ T GH V V +
Sbjct: 131166 YGISFTPQ--GDLIASANADKTVKIW---------RVRDGKALKTLIGHDNEVNKVNFSP 131020
Query: 237 LHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT 296
++L S + D + +W+ K + HT EV +SF+P + I+A+ SADKT
Sbjct: 131019 DGKTL-ASASRDNTVKLWNVSDGKFKKT---LKGHTDEVFWVSFSPDGK-IIASASADKT 130855
Query: 297 VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAE 356
+ LWD + L + + +H D ++ V+++P + ++LAS+ D+ + +W
Sbjct: 130854 IRLWDSFSGNL-IKSLPAHNDLVYSVNFNP-DGSMLASTSADKTVKLW------------ 130717
Query: 357 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
+ DG LL GH+ + S++P+ + I S SED ++IWQ+
Sbjct: 130716 RSHDG--HLLHTFSGHSNVVYSSSFSPDGRY-IASASEDKTVKIWQI 130585
Score = 51.6 bits (122), Expect = 1e-04
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 28/142 (19%)
Frame = -3
Query: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
+A+GS DKT+ LW R+ +L T H+D ++ V +SP +TI AS G+D+ + +W S
Sbjct: 132129 IASGSLDKTIKLWS-RDGRL-FRTLNGHEDAVYSVSFSPDGQTI-ASGGSDKTIKLWQTS 131959
Query: 348 K-------IGEEQSAEDAEDGPP---------------------ELLFIHGGHTAKISDF 379
G EQ+ + P +LL GH+A +
Sbjct: 131958 DGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITV 131779
Query: 380 SWNPNEPWVICSVSEDNIMQIW 401
++P + I + SED +++W
Sbjct: 131778 RFSP-DGQTIAAGSEDKTVKLW 131716
>dbj|D17526.1|TOBARCA Tobacco mRNA for G protein beta subunit-like protein (ArcA)
Length = 1296
Score = 75.5 bits (184), Expect = 9e-12
Identities = 78/297 (26%), Positives = 141/297 (47%), Gaps = 6/297 (2%)
Frame = +3
Query: 135 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLS 194
N +I T + ++V+ TK D P RL GH + +S+ LS
Sbjct: 114 NSDMIVTSSRDKSIIVWSITK-----DGPQYGVPRRRLTGHGHFVQDVVLSSD-GMFALS 275
Query: 195 ASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIW 254
S D + LWD+ AG + F GH+ V VA+ + + + S + D+ + +W
Sbjct: 276 GSWDGELRLWDLQAGTTARR-------FVGHTKDVLSVAFSVDNRQIV-SASRDKSIRLW 431
Query: 255 DTRSNTTSKPSHLV---DAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLRNLKLKLH 310
NT + + + D+H+ V+C+ F+P + + + +GS D+TV +W+L N KL+L
Sbjct: 432 ----NTLGECKYTIQDGDSHSDWVSCVRFSPNNLQPTIVSGSWDRTVKIWNLTNCKLRL- 596
Query: 311 TFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHG 370
T H + SP + ++ AS G D + +WDL++ + S E
Sbjct: 597 TLAGHTGYVNTPAVSP-DGSLCASGGKDGVILLWDLAEGKKLYSLESG------------ 737
Query: 371 GHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM-AENIYNDEESDV-TASELEGQGS 425
+ I ++PN W +C+ +E +I +IW + +++I +D + D+ SE+ +G+
Sbjct: 738 ---SIIHSLCFSPNRYW-LCAATESSI-KIWDLESKSIVDDLKVDLKQESEMSSEGT 893
>gb|AY071661.1| Drosophila melanogaster RE74715 full length cDNA
Length = 1155
Score = 75.5 bits (184), Expect = 9e-12
Identities = 74/286 (25%), Positives = 129/286 (44%), Gaps = 1/286 (0%)
Frame = +3
Query: 120 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 179
I H G V + P++P I + + ++V+ T+ + + P RL GH
Sbjct: 144 IGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRD----EDTNYGYPQKRLYGHSHFI 311
Query: 180 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 239
+ +S+ + LS S D T+ LWD+ AG + F GH+ V VA+ +
Sbjct: 312 SDVVLSSD-GNYALSGSWDQTLRLWDLAAGKTTRR-------FEGHTKDVLSVAFSADNR 467
Query: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP-YSEFILATGSADKTVA 298
+ S + D+ + +W+T + K + D HT V+C+ F+P +S I+ + D+TV
Sbjct: 468 QIV-SGSRDKTIKLWNTLAEC--KFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVK 638
Query: 299 LWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA 358
+W+L N KLK + H + V SP + ++ S G D + +WDL+ + E
Sbjct: 639 VWNLANCKLK-NNHHGHNGYLNTVTVSP-DGSLCTSGGKDSKALLWDLNDGKNLYTLE-- 806
Query: 359 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
H I+ ++PN W+ V+ ++IW +A
Sbjct: 807 -------------HNDIINALCFSPNRYWL--CVAYGPSIKIWDLA 899
>gb|AC002333.2|AC002333 Arabidopsis thaliana chromosome II section 236 of 255 of the complete
sequence. Sequence from clones F18O19, F6E13
Length = 94786
Score = 75.5 bits (184), Expect = 9e-12
Identities = 75/291 (25%), Positives = 120/291 (40%)
Frame = -2
Query: 111 TGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDL 170
T +E I + G + M NP + S D +F + H G+C +
Sbjct: 60042 TSSLEAPIMLL-SGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVH-------GDCKNFM 59887
Query: 171 RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 230
L+GH+ L W S+ S ++SAS D TV WD+ G + K+ + HS+ V
Sbjct: 59886 VLKGHKNAILDLHWTSDGS-QIVSASPDKTVRAWDVETGKQIKKMAE-------HSSFVN 59731
Query: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
L S +DD +WD R + D + ++ +SF+ ++ I T
Sbjct: 59730 SCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQT--FPDKY--QITAVSFSDAADKIF-T 59566
Query: 291 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
G D V +WDLR + + T E H+D I + SP +L ++G D +L VWD+
Sbjct: 59565 GGVDNDVKVWDLRKGEATM-TLEGHQDTITGMSLSPDGSYLL-TNGMDNKLCVWDMRPYA 59392
Query: 351 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
+ +G + SW+P+ V S D ++ IW
Sbjct: 59391 PQNRCVKIFEGHQH------NFEKNLLKCSWSPDGTKVTAG-SSDRMVHIW 59260
Score = 52.8 bits (125), Expect = 6e-05
Identities = 35/132 (26%), Positives = 61/132 (45%), Gaps = 10/132 (7%)
Frame = -2
Query: 257 RSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK 316
R+++ P L+ H + V + FNP I A+GS D+ + LW + + HK
Sbjct: 60045 RTSSLEAPIMLLSGHPSAVYTMKFNPAGTLI-ASGSHDREIFLWRVHGDCKNFMVLKGHK 59869
Query: 317 DEIFQVHWSPHNETILASSGTDRRLNVWD------LSKIGEEQSAEDA----EDGPPELL 366
+ I +HW+ I+++S D+ + WD + K+ E S ++ GPP ++
Sbjct: 59868 NAILDLHWTSDGSQIVSAS-PDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLII 59692
Query: 367 FIHGGHTAKISD 378
TAK+ D
Sbjct: 59691 SGSDDGTAKLWD 59656
>ref|NM_129939.1| putative splicing factor
Length = 1032
Score = 75.5 bits (184), Expect = 9e-12
Identities = 75/291 (25%), Positives = 120/291 (40%)
Frame = +1
Query: 111 TGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDL 170
T +E I + G + M NP + S D +F + H G+C +
Sbjct: 115 TSSLEAPIMLL-SGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVH-------GDCKNFM 270
Query: 171 RLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 230
L+GH+ L W S+ S ++SAS D TV WD+ G + K+ + HS+ V
Sbjct: 271 VLKGHKNAILDLHWTSDGS-QIVSASPDKTVRAWDVETGKQIKKMAE-------HSSFVN 426
Query: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
L S +DD +WD R + D + ++ +SF+ ++ I T
Sbjct: 427 SCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQT--FPDKY--QITAVSFSDAADKIF-T 591
Query: 291 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
G D V +WDLR + + T E H+D I + SP +L ++G D +L VWD+
Sbjct: 592 GGVDNDVKVWDLRKGEATM-TLEGHQDTITGMSLSPDGSYLL-TNGMDNKLCVWDMRPYA 765
Query: 351 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
+ +G + SW+P+ V S D ++ IW
Sbjct: 766 PQNRCVKIFEGHQH------NFEKNLLKCSWSPDGTKVTAG-SSDRMVHIW 897
Score = 52.8 bits (125), Expect = 6e-05
Identities = 35/132 (26%), Positives = 61/132 (45%), Gaps = 10/132 (7%)
Frame = +1
Query: 257 RSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHK 316
R+++ P L+ H + V + FNP I A+GS D+ + LW + + HK
Sbjct: 112 RTSSLEAPIMLLSGHPSAVYTMKFNPAGTLI-ASGSHDREIFLWRVHGDCKNFMVLKGHK 288
Query: 317 DEIFQVHWSPHNETILASSGTDRRLNVWD------LSKIGEEQSAEDA----EDGPPELL 366
+ I +HW+ I+++S D+ + WD + K+ E S ++ GPP ++
Sbjct: 289 NAILDLHWTSDGSQIVSAS-PDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLII 465
Query: 367 FIHGGHTAKISD 378
TAK+ D
Sbjct: 466 SGSDDGTAKLWD 501
>emb|AJ271728.1|ATH271728 Arabidopsis thaliana oasB gene for O-acetylserine (thiol) lyase B,
exons 1-10 and cnx6 gene for molybdopterin synthase,
large subunit
Length = 6247
Score = 75.1 bits (183), Expect = 1e-11
Identities = 64/238 (26%), Positives = 103/238 (42%)
Frame = +1
Query: 164 GECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFT 223
G+C + L+GH+ L W S+ S ++SAS D TV WD+ G + K+ +
Sbjct: 40 GDCKNFMVLKGHKNAILDLHWTSDGS-QIVSASPDKTVRAWDVETGKQIKKMAE------ 198
Query: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPY 283
HS+ V L S +DD +WD R + D + ++ +SF+
Sbjct: 199 -HSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQT--FPDKY--QITAVSFSDA 363
Query: 284 SEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
++ I TG D V +WDLR + + T E H+D I + SP +L ++G D +L V
Sbjct: 364 ADKIF-TGGVDNDVKVWDLRKGEATM-TLEGHQDTITGMSLSPDGSYLL-TNGMDNKLCV 534
Query: 344 WDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 401
WD+ + +G + SW+P+ V S D ++ IW
Sbjct: 535 WDMRPYAPQNRCVKIFEGHQH------NFEKNLLKCSWSPDGTKVTAG-SSDRMVHIW 687
Score = 38.5 bits (88), Expect = 1.2
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Frame = +1
Query: 291 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWD----- 345
GS D+ + LW + + HK+ I +HW+ I+++S D+ + WD
Sbjct: 1 GSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSAS-PDKTVRAWDVETGK 177
Query: 346 -LSKIGEEQSAEDA----EDGPPELLFIHGGHTAKISD 378
+ K+ E S ++ GPP ++ TAK+ D
Sbjct: 178 QIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWD 291
>gb|AF323584.1|AF323584 Podospora anserina beta transducin-like protein HET-E2C*40 (het-e)
gene, het-e2C*40 allele, complete cds
Length = 5413
Score = 75.1 bits (183), Expect = 1e-11
Identities = 64/253 (25%), Positives = 112/253 (43%)
Frame = +2
Query: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
L GH ++++ + + S SDD T+ +WD +G GH V
Sbjct: 3368 LEGHGSSVLSVAFSPD-GQRVASGSDDKTIKIWDAASGT-------GTQTLEGHGGSVWS 3523
Query: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
VA+ + + S +DD+ + IWD S T ++ ++ H + V ++F+P + + A+G
Sbjct: 3524 VAFSPDGQRV-ASGSDDKTIKIWDAASGTCTQT---LEGHGSSVLSVAFSPDGQRV-ASG 3688
Query: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 351
S DKT+ +WD + T E H ++ V +SP + + + SG D+ + +WD +
Sbjct: 3689 SGDKTIKIWDTAS-GTGTQTLEGHGGSVWSVAFSPDGQRVASGSG-DKTIKIWDTASGTC 3862
Query: 352 EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 411
Q+ E GH + +++P+ V S S+D ++IW D
Sbjct: 3863 TQTLE--------------GHGNSVWSVAFSPDGQRV-ASGSDDKTIKIW--------DT 3973
Query: 412 ESDVTASELEGQG 424
S LEG G
Sbjct: 3974 ASGTCTQTLEGHG 4012
Score = 61.6 bits (148), Expect = 1e-07
Identities = 49/183 (26%), Positives = 81/183 (43%)
Frame = +2
Query: 163 SGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIF 222
SG C L G + S + + S SDDHT+ +WD +G
Sbjct: 4103 SGTCTQTLEGHGDWVQSVAFSPDGQ---RVASGSDDHTIKIWDAASG-------TCTQTL 4252
Query: 223 TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNP 282
GH V VA+ + + S + D + IWD S T ++ ++ H V+ ++F+P
Sbjct: 4253 EGHGDSVWSVAFSPDGQRV-ASGSIDGTIKIWDAASGTCTQ---TLEGHGGWVHSVAFSP 4420
Query: 283 YSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
+ + A+GS D T+ +WD + T E H + V +SP + + AS +D +
Sbjct: 4421 DGQRV-ASGSIDGTIKIWDAAS-GTCTQTLEGHGGWVHSVAFSPDGQRV-ASGSSDNTIK 4591
Query: 343 VWD 345
+WD
Sbjct: 4592 IWD 4600
>gb|AF323583.1|AF323583 Podospora anserina beta transducin-like protein HET-E2C*4 (het-e)
gene, het-e2C*4 allele, complete cds
Length = 5413
Score = 75.1 bits (183), Expect = 1e-11
Identities = 64/253 (25%), Positives = 112/253 (43%)
Frame = +2
Query: 172 LRGHQKEGYGLS