TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(1066 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,174,033 sequences; 576,412,323 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
gb|BC008520.1|BC008520 Mus musculus, vinculin, clone MGC:61... 1884 0.0
ref|NM_009502.1| Mus musculus vinculin (Vcl), mRNA 1874 0.0
gb|L18880.1|MUSVINCULX Mus musculus vinculin mRNA, complete... 1874 0.0
ref|NM_003373.2| Homo sapiens vinculin (VCL), transcript va... 1874 0.0
gb|M33308.1|HUMVINC Human vinculin mRNA, complete cds 1874 0.0
gb|AF165172.1|AF165172 Sus scrofa vinculin mRNA, complete cds 1871 0.0
gb|J04126.1|CHKVINX Chicken vinculin mRNA, complete cds 1810 0.0
ref|NM_014000.1| Homo sapiens vinculin (VCL), transcript va... 1759 0.0
emb|Y00312.1|GGVINCR Chick mRNA for vinculin 1473 0.0
gb|BC008554.1|BC008554 Mus musculus, Similar to vinculin, c... 633 e-179
ref|NM_057472.1| Drosophila melanogaster Vinculin (Vinc), t... 378 e-102
ref|NM_068703.1| Caenorhabditis elegans 363 7e-98
gb|U07023.1|BMU07023 Brugia malayi vinculin mRNA, complete cds 359 1e-96
gb|AE003423.1|AE003423 Drosophila melanogaster genomic scaf... 347 5e-93
ref|NG_000237.1| Drosophila melanogaster Vinculin (Vinc) on... 347 5e-93
emb|AL009193.1|DMC103B4 Drosophila melanogaster cosmid clon... 347 5e-93
gb|AC104149.6| Drosophila melanogaster X BAC RP98-48O22 (Ro... 347 5e-93
emb|X96601.1|DMVIN D.melanogaster vinculin gene 344 3e-92
emb|Z19540.1|SSMTVINA S.scrofa metavinculin cDNA 322 1e-85
emb|Z19541.1|XLMTVINA X.laevis metavinculin cDNA 321 2e-85
gb|AC084630.1|CBRG45E13 Caenorhabditis briggsae cosmid G45E... 246 7e-63
ref|NM_068704.1| Caenorhabditis elegans 213 1e-52
dbj|D25281.1|MUSANCI Mouse mRNA for alpha N-catenin I, comp... 171 5e-40
dbj|D11090.1|CHKANC Chicken mRNA for alpha N-catenin, compl... 167 4e-39
gb|U34687.1|LVU34687 Lytechinus variegatus alpha catenin mR... 166 1e-38
gb|BC000385.1|BC000385 Homo sapiens, clone MGC:8429 IMAGE:2... 165 3e-38
dbj|D90362.1|MUSCAP102 Mouse mRNA for cadherin-associated p... 165 3e-38
dbj|D13866.1|HUMACA Human mRNA for alpha-catenin, complete cds 165 3e-38
ref|XM_038221.1| Homo sapiens catenin (cadherin-associated ... 165 3e-38
ref|NM_009818.1| Mus musculus catenin alpha 1 (Catna1), mRNA 165 3e-38
emb|X59990.1|MMALPA M.musculus alpha-catenin gene for alpha... 165 3e-38
dbj|AK004623.1|AK004623 Mus musculus adult male lung cDNA, ... 165 3e-38
dbj|D14705.1|HUMALPHAC Human mRNA for alpha-catenin, comple... 163 1e-37
gb|U47624.1|XLU47624 Xenopus laevis alpha(E)-catenin mRNA, ... 162 1e-37
gb|AF099737.1|AF099737 Danio rerio cell-adhesion protein al... 161 3e-37
ref|NM_004389.1| Homo sapiens catenin (cadherin-associated ... 160 5e-37
gb|M94151.2|HUMCAPR Homo sapiens cadherin-associated protei... 160 5e-37
ref|NM_009819.1| Mus musculus catenin alpha 2 (Catna2), mRNA 160 9e-37
dbj|D25282.1|MUSANCII Mouse mRNA for alpha N-catenin II, co... 160 9e-37
ref|NM_001903.1| Homo sapiens catenin (cadherin-associated ... 154 5e-35
gb|L23805.1|HUMCATENIN Human alpha1(E)-catenin mRNA, comple... 154 5e-35
ref|XM_010873.4| Homo sapiens catenin (cadherin-associated ... 153 8e-35
ref|NM_013266.1| Homo sapiens alpha-catenin-like protein (V... 151 4e-34
gb|AF091606.1|AF091606 Homo sapiens alpha-catenin-like prot... 151 4e-34
ref|NM_079495.1| Drosophila melanogaster alpha Catenin (alp... 151 4e-34
dbj|D13964.2|DROALPC Drosophila melanogaster mRNA for alpha... 151 4e-34
gb|AY051780.1| Drosophila melanogaster LD30423 full length ... 150 5e-34
gb|U03100.1|HSU03100 Human alpha2(E)-catenin mRNA, complete... 144 5e-32
dbj|AB041262.1|AB041262 Mus musculus mRNA for vinculin, par... 142 2e-31
gb|U40802.2| Caenorhabditis elegans cosmid ZC477, complete ... 140 9e-31
gb|J04804.1|CELDEB1A C.elegans vinculin (deb-1) gene, compl... 140 9e-31
gb|S87223.1|S87218S3 vinculin [human, Genomic, 434 nt, segm... 132 1e-28
gb|S87180.1|S87175S3 meta-vinculin=muscle-specific variant ... 132 1e-28
gb|AF016852.1|AF016852 Caenorhabditis elegans HMP-1 mRNA, c... 124 7e-26
ref|NM_073584.1| alpha-catenin 124 7e-26
gb|L04933.1|HUMVCLX Human vinculin (VCL) gene exon 1, 5' end 112 2e-22
gb|S52276.1|S52270S4 vinculin=talin-binding cytoskeletal pr... 107 7e-21
gb|L13299.1|MUSVIN01 Mus musculus vinculin gene, exon 3 103 7e-20
gb|S52270.1|S52270S1 vinculin=talin-binding cytoskeletal pr... 101 4e-19
gb|AC010027.5| Drosophila melanogaster 3L BAC RP98-22B15 (R... 88 5e-15
gb|AE002656.1|AE002656 Drosophila melanogaster genomic scaf... 88 5e-15
gb|BC013847.1|BC013847 Homo sapiens, clone IMAGE:4387297, mRNA 84 8e-14
gb|S52272.1|S52270S3 vinculin=talin-binding cytoskeletal pr... 83 1e-13
ref|XM_045972.5| Homo sapiens alpha-catenin-like protein (V... 79 3e-12
gb|S52271.1|S52270S2 vinculin=talin-binding cytoskeletal pr... 77 1e-11
gb|L13300.1|MUSVIN02 Mus musculus vinculin gene, exon 4 77 1e-11
gb|AC024780.1|AC024780 Caenorhabditis elegans cosmid Y43B11... 75 4e-11
emb|Z81579.1|CER13H4 Caenorhabditis elegans cosmid R13H4, c... 73 1e-10
gb|BC020328.1|BC020328 Mus musculus, clone IMAGE:4020609, mRNA 71 7e-10
gb|BC022004.1|BC022004 Homo sapiens, Similar to alpha-caten... 61 5e-07
gb|S87218.1|S87218S1 vinculin [human, Genomic, 260 nt, segm... 60 9e-07
gb|S87175.1|S87175S1 meta-vinculin=muscle-specific variant ... 60 9e-07
emb|Z37994.1|HSCTNNA1P H.sapiens alpha E-catenin pseudogene 54 7e-05
emb|AJ312390.1|MMU312390 Mus musculus mRNA for nonmuscle he... 50 0.001
gb|U31463.1|RNU31463 Rattus norvegicus nonmuscle myosin hea... 50 0.002
ref|NM_013194.1| Rattus norvegicus Myosin, heavy polypeptid... 50 0.002
gb|BC006075.1|BC006075 Mus musculus, Similar to Myosin, hea... 49 0.002
emb|Z32677.1|SSMLC36 Streptococcus sp. group C (C36) MLC36 ... 47 0.014
gb|U87265.1|BTU87265 Bos taurus non-muscle myosin heavy cha... 47 0.014
emb|X62467.1|SSPFCRV S.sp (valente) fcrV gene 46 0.024
emb|Z32678.1|SSMLG72 Streptococcus sp. group G (G72) MLG72 ... 45 0.031
emb|X80168.1|SPEMM3G S.pyogenes emm3 gene 45 0.031
ref|NM_017240.1| Rattus norvegicus myosin heavy chain, card... 45 0.031
emb|X15939.1|RNMHCB Rat mRNA for beta cardiac myosin heavy ... 45 0.031
gb|M18269.1|STR12M S.pyogenes surface protein M type 12 (em... 45 0.041
emb|X78484.1|SPFCRA78 S.pyogenes (strain M8-4025) FcrA8 gen... 45 0.041
emb|X07273.1|MAMYOBH Hamster mRNA for cardiac beta-myosin h... 45 0.053
gb|AF324061.1|AF324061 Streptococcus pyogenes IgG Fc recept... 44 0.069
emb|X60098.1|SSGEMM Streptococcus sp. (group G) emm gene fo... 44 0.091
emb|X81475.1|MHLMP M.hominis lmp1 and lmp2 genes 44 0.091
gb|AE004844.1|AE004844 Pseudomonas aeruginosa PA01, section... 44 0.12
gb|M20374.1|STRSMP5A S.pyogenes smp5 gene encoding serotype... 44 0.12
gb|S75411.1|S75411 vir regulon: mry15=Mry homolog...scpA15=... 43 0.15
gb|U02480.1|SPU02480 Streptococcus pyogenes NCTC8193 antiph... 43 0.15
gb|J04669.1|TCSTROP Nematode muscle tropomyosin mRNA, compl... 43 0.15
gb|AC084674.1|CBRG47I21 Caenorhabditis briggsae cosmid G47I... 43 0.20
gb|U39838.1|SPU39838 Streptococcus pyogenes M protein (emm1... 43 0.20
dbj|AB016537.3|AB016537 Streptococcus pyogenes genes for OR... 43 0.20
ref|XM_033374.1| Homo sapiens myosin, heavy polypeptide 7, ... 42 0.26
gb|AE004993.1|AE004993 Halobacterium sp. NRC-1 section 24 o... 42 0.26
ref|NM_000257.1| Homo sapiens myosin, heavy polypeptide 7, ... 42 0.26
gb|M58018.1|HUMBMYH7CD Homo sapiens beta-myosin heavy chain... 42 0.26
dbj|AB053226.1|AB053226 Sus scrofa MyHC-slow mRNA for myosi... 42 0.26
emb|X03741.1|HSMYH2R Human cardiac mRNA for myosin heavy ch... 42 0.26
emb|X06976.1|HSMYOBH Human mRNA for cardiac beta myosin hea... 42 0.26
gb|M17712.1|HUMMYH Human cardiac myosin heavy chain mRNA, 3... 42 0.26
gb|M21665.1|HUMMYHC5 Human beta-myosin heavy chain mRNA, 3'... 42 0.26
dbj|AB015484.1|AB015484 Dugesia japonica mRNA for myosin he... 42 0.34
emb|X60097.1|SSCEMM Streptococcus sp. (group C) emm gene fo... 42 0.34
gb|AF229810.1|AF229810 Felis catus slow myosin heavy chain ... 42 0.34
dbj|AK055751.1|AK055751 Homo sapiens cDNA FLJ31189 fis, clo... 42 0.34
emb|X51591.1|HSBMHCV Human beta-MHC mRNA for beta myosin he... 42 0.34
ref|XM_089696.1| Homo sapiens similar to alpha-catenin-like... 42 0.45
gb|M11338.1|STRM6 Streptococcus pyogenes emm6 gene coding f... 42 0.45
emb|X60959.1|SPEMM57 S.pyogenes emm57 gene for M57 protein 42 0.45
gb|U21963.1|MHU21963 Mycoplasma hominis Mh81 Lmp1 (lmp1) ge... 41 0.59
gb|AY056464.1| Mus musculus beta myosin heavy chain mRNA, c... 41 0.59
gb|U21962.1|MHU21962 Mycoplasma hominis Mh56 Lmp1 (lmp1) ge... 41 0.59
emb|X72932.1|SPEMMFCR S.pyogenes genes for Fcr protein and ... 41 0.59
gb|U75316.1|SSU75316 Sus scrofa beta-myosin heavy chain mRN... 41 0.59
gb|AE006012.1|AE006012 Caulobacter crescentus section 338 ... 41 0.77
emb|AJ319534.1|SPY319534 Streptococcus pyogenes partial emm... 41 0.77
gb|U26458.1|SRU26458 Snakehead retrovirus (SnRV), complete ... 40 1.0
dbj|D38541.1|CELTMY1C Caenorhabditis elegans mRNA tmy-1 for... 40 1.3
dbj|AB032020.1|AB032020 Seriola dumerilii mRNA for myosin h... 40 1.3
dbj|D38540.1|CELTMY1B Caenorhabditis elegans tmy-1 mRNA for... 40 1.3
emb|X91846.1|SSMYHCC Sus scrofa mRNA for cardiac myosin hea... 40 1.3
gb|AF006665.1|AF006665 Bacillus subtilis 168 region at 182 ... 40 1.7
dbj|AB059400.1|AB059400 Bos taurus MyHC-slow mRNA for myosi... 40 1.7
emb|X95601.1|MHLMP34GN M.hominis lmp3 and lmp4 genes 40 1.7
gb|AF272857.1|AF272857 Methanopyrus kandleri carbon monoxid... 40 1.7
emb|Z99114.1|BSUB0011 Bacillus subtilis complete genome (se... 40 1.7
gb|AF015775.1|AF015775 Bacillus subtilis YodA (yodA), YodB ... 40 1.7
emb|Z22219.1|SPPAMPR S.pyogenes PAM protein gene 39 2.2
gb|M95774.1|STRMPROTN Group G streptococci M protein gene, ... 39 2.2
emb|X58179.1|SPEMM52 S.pyogenes for emm52 gene 39 2.2
gb|AF097904.1|AF097904 Rana catesbeiana myosin heavy chain ... 39 2.9
gb|AF041382.1|AF041382 Drosophila melanogaster microtubule ... 39 2.9
gb|AE004684.1|AE004684 Pseudomonas aeruginosa PA01, section... 39 2.9
dbj|AB000214.1|AB000214 Theragra chalcogramma mRNA for myos... 39 2.9
dbj|AB039332.1|AB039332 Pseudomonas aeruginosa gene for che... 39 2.9
gb|AF317887.1|AF317887 Homo sapiens monoclonal antibody 3H1... 39 3.8
gb|U29585.1|SPU29585 Streptococcus pyogenes emm18.1 gene, c... 39 3.8
ref|NM_061137.1| Caenorhabditis elegans 39 3.8
ref|NM_061136.1| Caenorhabditis elegans 39 3.8
ref|NM_025114.1| Homo sapiens hypothetical protein FLJ13615... 38 5.0
dbj|AK023677.1|AK023677 Homo sapiens cDNA FLJ13615 fis, clo... 38 5.0
gb|M19932.1|BABBMYHA Baboon beta-myosin heavy-chain mRNA, p... 38 5.0
ref|NM_073088.1| Caenorhabditis elegans 38 6.5
gb|AC008067.3|AC008067 Homo sapiens BAC clone RP11-303I4 fr... 38 6.5
emb|AL607023.3|AL607023 Human DNA sequence from clone RP11-... 38 6.5
emb|AL662833.4| Human DNA sequence from clone XXbac-101P6 o... 37 8.5
gb|AC004195.1|AC004195 Homo sapiens clone UWGC:y24c027 from... 37 8.5
emb|X72090.1|SPEMM55 S.pyogenes emm55 gene for M-protein 37 8.5
gb|AE006624.1|AE006624 Streptococcus pyogenes M1 GAS strain... 37 8.5
gb|U65899.1|SPU65899 Streptococcus pyogenes M protein gene,... 37 8.5
emb|AJ278733.1|MMU278733 Mus musculus partial mRNA for myos... 37 8.5
dbj|AP000509.1|AP000509 Homo sapiens genomic DNA, chromosom... 37 8.5
dbj|AB023059.1|AB023059 Homo sapiens genomic DNA, chromosom... 37 8.5
ref|NM_065305.1| Caenorhabditis elegans 37 8.5
ref|XM_087932.1| Homo sapiens hypothetical gene supported b... 37 8.5
ref|XM_045378.2| Homo sapiens hypothetical protein FLJ14957... 37 8.5
emb|AJ243770.1|PFO243770 Paracirrhites forsteri mRNA for fa... 37 8.5
dbj|AP001508.1|AP001508 Bacillus halodurans genomic DNA, se... 37 8.5
>gb|BC008520.1|BC008520 Mus musculus, vinculin, clone MGC:6134 IMAGE:3495710, mRNA, complete
cds
Length = 5257
Score = 1884 bits (4879), Expect = 0.0
Identities = 995/1066 (93%), Positives = 995/1066 (93%)
Frame = +2
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
Sbjct: 89 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 268
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
Sbjct: 269 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 448
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
Sbjct: 449 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 628
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
Sbjct: 629 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 808
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR 300
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR
Sbjct: 809 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR 988
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL
Sbjct: 989 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 1168
Query: 361 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 420
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
Sbjct: 1169 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 1348
Query: 421 LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
Sbjct: 1349 LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 1528
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
Sbjct: 1529 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 1708
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS 600
LLAKCDRV RGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS
Sbjct: 1709 LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS 1888
Query: 601 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXNKSTVEG 660
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRL NKSTVEG
Sbjct: 1889 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG 2068
Query: 661 IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 720
IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
Sbjct: 2069 IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 2248
Query: 721 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 780
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
Sbjct: 2249 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 2428
Query: 781 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXX 840
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA
Sbjct: 2429 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP 2608
Query: 841 XXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMM 900
RLTDELA QKAGEVINQPMMM
Sbjct: 2609 DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM 2788
Query: 901 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 960
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
Sbjct: 2789 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 2968
Query: 961 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 1020
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
Sbjct: 2969 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 3148
Query: 1021 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 3149 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 3286
>ref|NM_009502.1| Mus musculus vinculin (Vcl), mRNA
Length = 3228
Score = 1874 bits (4855), Expect = 0.0
Identities = 990/1066 (92%), Positives = 993/1066 (92%)
Frame = +3
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEP AQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
Sbjct: 18 MPVFHTRTIESILEPEAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 197
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
Sbjct: 198 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 377
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
Sbjct: 378 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 557
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVT+KNSKNQGIEEALKNRNFTVEKMSAE
Sbjct: 558 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTSKNSKNQGIEEALKNRNFTVEKMSAE 737
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR 300
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR
Sbjct: 738 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR 917
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL
Sbjct: 918 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 1097
Query: 361 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 420
DV+TAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
Sbjct: 1098 DVVTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 1277
Query: 421 LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
Sbjct: 1278 LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 1457
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
VANSRPAKAAVHLEGKIEQA+RWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
Sbjct: 1458 VANSRPAKAAVHLEGKIEQARRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 1637
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS 600
LLAKCDRV RGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS
Sbjct: 1638 LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS 1817
Query: 601 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXNKSTVEG 660
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRL NKSTVEG
Sbjct: 1818 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG 1997
Query: 661 IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 720
IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
Sbjct: 1998 IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 2177
Query: 721 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 780
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
Sbjct: 2178 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 2357
Query: 781 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXX 840
EAVKAASDELSKTISPMVMDAKAVAGNISDP LQKSFLDSGYRILGAVAKVREA
Sbjct: 2358 EAVKAASDELSKTISPMVMDAKAVAGNISDPDLQKSFLDSGYRILGAVAKVREAFQPQEP 2537
Query: 841 XXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMM 900
RLTDELA QKAGEVINQPMMM
Sbjct: 2538 DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM 2717
Query: 901 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 960
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
Sbjct: 2718 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 2897
Query: 961 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 1020
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
Sbjct: 2898 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 3077
Query: 1021 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 3078 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 3215
>gb|L18880.1|MUSVINCULX Mus musculus vinculin mRNA, complete cds
Length = 3228
Score = 1874 bits (4855), Expect = 0.0
Identities = 990/1066 (92%), Positives = 993/1066 (92%)
Frame = +3
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEP AQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
Sbjct: 18 MPVFHTRTIESILEPEAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 197
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
Sbjct: 198 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 377
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
Sbjct: 378 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 557
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVT+KNSKNQGIEEALKNRNFTVEKMSAE
Sbjct: 558 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTSKNSKNQGIEEALKNRNFTVEKMSAE 737
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR 300
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR
Sbjct: 738 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR 917
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL
Sbjct: 918 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 1097
Query: 361 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 420
DV+TAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
Sbjct: 1098 DVVTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 1277
Query: 421 LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
Sbjct: 1278 LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 1457
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
VANSRPAKAAVHLEGKIEQA+RWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
Sbjct: 1458 VANSRPAKAAVHLEGKIEQARRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 1637
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS 600
LLAKCDRV RGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS
Sbjct: 1638 LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS 1817
Query: 601 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXNKSTVEG 660
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRL NKSTVEG
Sbjct: 1818 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG 1997
Query: 661 IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 720
IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
Sbjct: 1998 IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 2177
Query: 721 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 780
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
Sbjct: 2178 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 2357
Query: 781 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXX 840
EAVKAASDELSKTISPMVMDAKAVAGNISDP LQKSFLDSGYRILGAVAKVREA
Sbjct: 2358 EAVKAASDELSKTISPMVMDAKAVAGNISDPDLQKSFLDSGYRILGAVAKVREAFQPQEP 2537
Query: 841 XXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMM 900
RLTDELA QKAGEVINQPMMM
Sbjct: 2538 DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM 2717
Query: 901 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 960
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
Sbjct: 2718 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 2897
Query: 961 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 1020
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
Sbjct: 2898 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 3077
Query: 1021 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 3078 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 3215
>ref|NM_003373.2| Homo sapiens vinculin (VCL), transcript variant VCL, mRNA
Length = 5137
Score = 1874 bits (4854), Expect = 0.0
Identities = 988/1066 (92%), Positives = 994/1066 (92%)
Frame = +2
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
Sbjct: 86 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 265
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
Sbjct: 266 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 445
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
Sbjct: 446 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 625
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
Sbjct: 626 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 805
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR 300
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDP+ASPGDAGEQAIR
Sbjct: 806 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR 985
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQG+SPVAMQKAQQVSQGL
Sbjct: 986 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL 1165
Query: 361 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 420
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
Sbjct: 1166 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 1345
Query: 421 LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
LCDDPKERDDILRSLGEI+ALTSKL DLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
Sbjct: 1346 LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 1525
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
Sbjct: 1526 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 1705
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS 600
LLAKCDRV RGEGESPQARALASQLQDSLKDLKA+MQEAMTQEVSDVFS
Sbjct: 1706 LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS 1885
Query: 601 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXNKSTVEG 660
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSG+L NKSTVEG
Sbjct: 1886 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGKLGATAEKAAAVGTANKSTVEG 2065
Query: 661 IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 720
IQASVKTARELTPQV+SAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
Sbjct: 2066 IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 2245
Query: 721 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 780
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
Sbjct: 2246 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 2425
Query: 781 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXX 840
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA
Sbjct: 2426 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP 2605
Query: 841 XXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMM 900
RLTDELA QKAGEVINQPMMM
Sbjct: 2606 DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM 2785
Query: 901 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 960
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
Sbjct: 2786 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 2965
Query: 961 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 1020
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
Sbjct: 2966 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 3145
Query: 1021 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 3146 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 3283
>gb|M33308.1|HUMVINC Human vinculin mRNA, complete cds
Length = 5102
Score = 1874 bits (4854), Expect = 0.0
Identities = 988/1066 (92%), Positives = 994/1066 (92%)
Frame = +3
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
Sbjct: 51 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 230
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
Sbjct: 231 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 410
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
Sbjct: 411 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 590
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
Sbjct: 591 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 770
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR 300
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDP+ASPGDAGEQAIR
Sbjct: 771 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR 950
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQG+SPVAMQKAQQVSQGL
Sbjct: 951 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL 1130
Query: 361 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 420
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
Sbjct: 1131 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 1310
Query: 421 LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
LCDDPKERDDILRSLGEI+ALTSKL DLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
Sbjct: 1311 LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 1490
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
Sbjct: 1491 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 1670
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS 600
LLAKCDRV RGEGESPQARALASQLQDSLKDLKA+MQEAMTQEVSDVFS
Sbjct: 1671 LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS 1850
Query: 601 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXNKSTVEG 660
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSG+L NKSTVEG
Sbjct: 1851 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGKLGATAEKAAAVGTANKSTVEG 2030
Query: 661 IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 720
IQASVKTARELTPQV+SAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
Sbjct: 2031 IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 2210
Query: 721 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 780
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
Sbjct: 2211 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 2390
Query: 781 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXX 840
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA
Sbjct: 2391 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP 2570
Query: 841 XXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMM 900
RLTDELA QKAGEVINQPMMM
Sbjct: 2571 DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM 2750
Query: 901 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 960
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
Sbjct: 2751 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 2930
Query: 961 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 1020
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
Sbjct: 2931 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 3110
Query: 1021 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 3111 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 3248
>gb|AF165172.1|AF165172 Sus scrofa vinculin mRNA, complete cds
Length = 5200
Score = 1871 bits (4847), Expect = 0.0
Identities = 990/1067 (92%), Positives = 993/1067 (92%), Gaps = 1/1067 (0%)
Frame = +1
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
Sbjct: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 180
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
Sbjct: 181 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 360
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
Sbjct: 361 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 540
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
Sbjct: 541 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 720
Query: 241 INEIIRVLQLTSWDEDAWASK-DTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAI 299
INEIIRVLQLTSWDEDAWASK DTEAMKRALASIDSKLNQAKGWLRDP ASPGDAGEQAI
Sbjct: 721 INEIIRVLQLTSWDEDAWASKKDTEAMKRALASIDSKLNQAKGWLRDPTASPGDAGEQAI 900
Query: 300 RQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQG 359
RQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQG
Sbjct: 901 RQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQG 1080
Query: 360 LDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIA 419
LDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIA
Sbjct: 1081 LDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIA 1260
Query: 420 ELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNR 479
ELCDDPKERDDILRSLGEI+ALTSKL DLRRQGKGDSPEARALAKQVATALQNLQTKTNR
Sbjct: 1261 ELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNR 1440
Query: 480 AVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQ 539
AVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQ
Sbjct: 1441 AVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQ 1620
Query: 540 DLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVF 599
DLLAKCDRV RGEGESPQARALASQLQDSLKDLKA+MQEAMTQEVSDVF
Sbjct: 1621 DLLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVF 1800
Query: 600 SDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXNKSTVE 659
SDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRL NKSTVE
Sbjct: 1801 SDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVE 1980
Query: 660 GIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT 719
GIQASVKTARELTPQV+SAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
Sbjct: 1981 GIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT 2160
Query: 720 KSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKF 779
KSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
Sbjct: 2161 KSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKF 2340
Query: 780 REAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXX 839
REAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA
Sbjct: 2341 REAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQE 2520
Query: 840 XXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMM 899
RLTDELA QKAGEVINQPMM
Sbjct: 2521 PDFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMM 2700
Query: 900 MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASD 959
MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASD
Sbjct: 2701 MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASD 2880
Query: 960 EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQA 1019
EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQA
Sbjct: 2881 EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQA 3060
Query: 1020 TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 3061 TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 3201
>gb|J04126.1|CHKVINX Chicken vinculin mRNA, complete cds
Length = 3247
Score = 1810 bits (4689), Expect = 0.0
Identities = 946/1066 (88%), Positives = 978/1066 (91%)
Frame = +3
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV+AVQAAVSNLVRVGKE
Sbjct: 21 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKE 200
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
TVQTTEDQILKRDMPPAFIKVENACTKLV+AAQMLQ+DPYSVPARDYLIDGSRGILSGTS
Sbjct: 201 TVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTS 380
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
Sbjct: 381 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 560
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKN+K+QGIEEALKNRNFTVEKMSAE
Sbjct: 561 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNTKSQGIEEALKNRNFTVEKMSAE 740
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR 300
INEIIRVLQLTSWDEDAWASKDTEAMKRALA IDSK+NQAKGWLRDPNA PGDAGEQAIR
Sbjct: 741 INEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAIR 920
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
QILDEAGK GELCAGKERREILGTCK LGQMTDQ+ADLRARGQGA+P+AMQKAQQVSQGL
Sbjct: 921 QILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGL 1100
Query: 361 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 420
D+LTAKVENAARKLEAMTNSKQ+IAKKIDAAQNWLADPNGG EGEE IRG ++EARK+AE
Sbjct: 1101 DLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAE 1280
Query: 421 LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
LC++PKERDDILRSLGEI+ALT+KL DLRR GKGDSPEARALAKQ+AT+LQNLQ+KTNRA
Sbjct: 1281 LCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNRA 1460
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
VAN+RP KAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEG RLANVMMGPYRQD
Sbjct: 1461 VANTRPVKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRRLANVMMGPYRQD 1640
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS 600
LLAKCDRV RGEGESPQARA+A+QLQDSLKDLKA+MQEAMTQEVSDVFS
Sbjct: 1641 LLAKCDRVDQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLKARMQEAMTQEVSDVFS 1820
Query: 601 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXNKSTVEG 660
DTTTPIKLLAVAATAP D PNREEVF+ERAANFENH+ RL NK+TVEG
Sbjct: 1821 DTTTPIKLLAVAATAPSDTPNREEVFEERAANFENHAARLGATAEKAAAVGTANKTTVEG 2000
Query: 661 IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 720
IQA+VK+ARELTPQV+SAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
Sbjct: 2001 IQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 2180
Query: 721 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 780
SLLDASEEAIKKDLDKCKVAMAN+QPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
Sbjct: 2181 SLLDASEEAIKKDLDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 2360
Query: 781 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXX 840
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA
Sbjct: 2361 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP 2540
Query: 841 XXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMM 900
LTDELA QKAGE INQPMMM
Sbjct: 2541 DFPPPPPDLEHLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEAINQPMMM 2720
Query: 901 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE 960
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSG KRALIQCAKDIAKASDE
Sbjct: 2721 AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDE 2900
Query: 961 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 1020
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
Sbjct: 2901 VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT 3080
Query: 1021 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 3081 EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 3218
>ref|NM_014000.1| Homo sapiens vinculin (VCL), transcript variant meta-VCL, mRNA
Length = 5341
Score = 1759 bits (4556), Expect = 0.0
Identities = 954/1134 (84%), Positives = 967/1134 (85%), Gaps = 68/1134 (5%)
Frame = +2
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
Sbjct: 86 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 265
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
Sbjct: 266 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 445
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
Sbjct: 446 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 625
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
Sbjct: 626 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 805
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR 300
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDP+ASPGDAGEQAIR
Sbjct: 806 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR 985
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQG+SPVAMQKAQQVSQGL
Sbjct: 986 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGSSPVAMQKAQQVSQGL 1165
Query: 361 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 420
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
Sbjct: 1166 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 1345
Query: 421 LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
LCDDPKERDDILRSLGEI+ALTSKL DLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
Sbjct: 1346 LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 1525
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
Sbjct: 1526 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 1705
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS 600
LLAKCDRV RGEGESPQARALASQLQDSLKDLKA+MQEAMTQEVSDVFS
Sbjct: 1706 LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS 1885
Query: 601 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXNKSTVEG 660
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSG+L NKSTVEG
Sbjct: 1886 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGKLGATAEKAAAVGTANKSTVEG 2065
Query: 661 IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 720
IQASVKTARELTPQV+SAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
Sbjct: 2066 IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 2245
Query: 721 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 780
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
Sbjct: 2246 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 2425
Query: 781 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXX 840
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA
Sbjct: 2426 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP 2605
Query: 841 XXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMM 900
RLTDELA QKAGEVINQPMMM
Sbjct: 2606 DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM 2785
Query: 901 AARQLHDEARKWSSK--------GNDIIAAAK---------------------------- 924
AARQLHDEARKWSSK G ++A A
Sbjct: 2786 AARQLHDEARKWSSKPGIPAAEVGIGVVAEADAADAAGFPVPPDMEDDYEPELLLMPSNQ 2965
Query: 925 --RMALLMAEMS--RLVRGGSGTKRALIQCAKDIAKASDEVTRL---------------- 964
+L A S R S +I AK +A E++RL
Sbjct: 2966 PVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAK 3145
Query: 965 ------------AKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNIS 1012
AKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNIS
Sbjct: 3146 DIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNIS 3325
Query: 1013 DEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
DEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 3326 DEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 3487
>emb|Y00312.1|GGVINCR Chick mRNA for vinculin
Length = 2891
Score = 1473 bits (3813), Expect = 0.0
Identities = 764/859 (88%), Positives = 795/859 (91%)
Frame = +1
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV+AVQAAVSNLVRVGKE
Sbjct: 247 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKE 426
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
TVQTTEDQILKRDMPPAFIKVENACTKLV+AAQMLQ+DPYSVPARDYLIDGSRGILSGTS
Sbjct: 427 TVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTS 606
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
Sbjct: 607 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 786
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKN+K+QGIEEALKNRNFTVEKMSAE
Sbjct: 787 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNTKSQGIEEALKNRNFTVEKMSAE 966
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR 300
INEIIRVLQLTSWDEDAWASKDTEAMKRALA IDSK+NQAKGWLRDPNA PGDAGEQAIR
Sbjct: 967 INEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAIR 1146
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
QILDEAGK GELCAGKERREILGTCK LGQMTDQ+ADLRARGQGA+P+AMQKAQQVSQGL
Sbjct: 1147 QILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGL 1326
Query: 361 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 420
D+LTAKVENAARKLEAMTNSKQ+IAKKIDAAQNWLADPNGG EGEE IRG ++EARK+AE
Sbjct: 1327 DLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAE 1506
Query: 421 LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
LC++PKERDDILRSLGEI+AL LRR GKGDSPEARALAKQ+AT+LQNLQ+KTNRA
Sbjct: 1507 LCEEPKERDDILRSLGEISALQLSCQILRRHGKGDSPEARALAKQIATSLQNLQSKTNRA 1686
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
VAN+RP KAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEG RLANVMMGPYRQD
Sbjct: 1687 VANTRPVKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRRLANVMMGPYRQD 1866
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS 600
LLAKCDRV RGEGESPQARA+A+QLQDSLKDLKA+MQEAMTQEVSDVFS
Sbjct: 1867 LLAKCDRVDQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLKARMQEAMTQEVSDVFS 2046
Query: 601 DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXNKSTVEG 660
DTTTPIKLLAVAATAP D PNREEVF+ERAANFENH+ RL NK+TVEG
Sbjct: 2047 DTTTPIKLLAVAATAPSDTPNREEVFEERAANFENHAARLGATAEKAAAVGTANKTTVEG 2226
Query: 661 IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK 720
IQA+VK+ARELTPQV+SAARILLRNPGNQAAYEHFETMKN WIDNVEKMTGLVDEAIDTK
Sbjct: 2227 IQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNHWIDNVEKMTGLVDEAIDTK 2406
Query: 721 SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 780
SLLDASEEAIKKDLDKCKVAMAN+QPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
Sbjct: 2407 SLLDASEEAIKKDLDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR 2586
Query: 781 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXX 840
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA
Sbjct: 2587 EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP 2766
Query: 841 XXXXXXXXXXXXRLTDELA 859
LTDELA
Sbjct: 2767 DFPPPPPDLEHLHLTDELA 2823
>gb|BC008554.1|BC008554 Mus musculus, Similar to vinculin, clone IMAGE:3591911, mRNA, partial
cds
Length = 3138
Score = 633 bits (1632), Expect = e-179
Identities = 343/389 (88%), Positives = 343/389 (88%)
Frame = +1
Query: 678 AARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKC 737
AARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKC
Sbjct: 1 AARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKC 180
Query: 738 KVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPM 797
KVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPM
Sbjct: 181 KVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPM 360
Query: 798 VMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDE 857
VMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA RLTDE
Sbjct: 361 VMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEPDFPPPPPDLEQLRLTDE 540
Query: 858 LAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMMAARQLHDEARKWSSKGN 917
LA QKAGEVINQPMMMAARQLHDEARKWSSKGN
Sbjct: 541 LAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMMAARQLHDEARKWSSKGN 720
Query: 918 DIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRI 977
DIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRI
Sbjct: 721 DIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRI 900
Query: 978 RTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKET 1037
RTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKET
Sbjct: 901 RTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKET 1080
Query: 1038 VREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
VREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 1081 VREAEAASIKIRTDAGFTLRWVRKTPWYQ 1167
>ref|NM_057472.1| Drosophila melanogaster Vinculin (Vinc), transcript variant
Vinc-P1|CDS, mRNA
Length = 2886
Score = 378 bits (971), Expect = e-102
Identities = 208/487 (42%), Positives = 302/487 (61%), Gaps = 4/487 (0%)
Frame = +1
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHT+TIESIL+PVAQQ+S LVI+HEE E DG A+PDL+ PV V AAV+NLV+VG++
Sbjct: 1 MPVFHTKTIESILDPVAQQVSRLVILHEEAE-DGNAMPDLSRPVQVVSAAVANLVKVGRD 177
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
T+ +++D+IL++DMP A +VE A L +A+ ML+SDPYS PAR LI+GSRGIL GTS
Sbjct: 178 TINSSDDKILRQDMPSALHRVEGASQLLEEASDMLRSDPYSGPARKKLIEGSRGILQGTS 357
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
LLL FDE+EVRKII+ CK +L+YL VAEV+ TME LV + K+L P ++K+ + + R++
Sbjct: 358 SLLLCFDESEVRKIIQECKRVLDYLAVAEVINTMEQLVQFLKDLSPCLSKVHREVGAREK 537
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQ H +LV + VK L P+LI +MK+++ + +G EEA +NRN+ +MS E
Sbjct: 538 ELTHQVHSEILVRCLEQVKTLAPILICSMKVYIHIVEQQGRGAEEAAENRNYLAARMSDE 717
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR 300
+ EIIRVLQLT++DED + +K+ +I +K+ QA WL +P A G GE+A+R
Sbjct: 718 LQEIIRVLQLTTYDEDTSELDNLTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALR 897
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
Q++D A ++ E C ++ I + M + + +LR G+G SP A + + +
Sbjct: 898 QVIDNATEISERCLPQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRM 1077
Query: 361 DVLTAKVENAARKLE--AMTNSKQSIAKKIDAAQNWLADP--NGGPEGEEQIRGALAEAR 416
L + V A ++ + + +I +++ A WL P N G GE I + E R
Sbjct: 1078GELKSLVHQAVLGVDKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGR 1257
Query: 417 KIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTK 476
K+AE C ++ EI L ++ L+RQ G P A+ AKQ+ L L+
Sbjct: 1258KVAEGCPGHQK--------AEIQQLCDEVERLKRQAAGSGPAAKQAAKQLTQKLYELKAA 1413
Query: 477 TNRAVAN 483
A+ N
Sbjct: 1414IQNALVN 1434
Score = 263 bits (671), Expect = 9e-68
Identities = 158/477 (33%), Positives = 259/477 (54%), Gaps = 6/477 (1%)
Frame = +1
Query: 364 TAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNG--GPEGEEQIRGALAEARKIAEL 421
T++++N L + +I+ K++ A WL++P G GE+ +R + A +I+E
Sbjct: 766 TSELDN----LTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISER 933
Query: 422 CDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRAV 481
C P++ I + E+ A+ + L +LR++GKG SP+A +L + + + L++ ++AV
Sbjct: 934 CL-PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAV 1110
Query: 482 ANSRPA---KAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYR 538
A + A ++G++EQA +W+ +P ++D G+G+ AI +V EG ++A G +
Sbjct: 1111 LGVDKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK 1290
Query: 539 QDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDV 598
++ CD V + G P A+ A QL L +LKA +Q A+ +
Sbjct: 1291 AEIQQLCDEVERLKR-------QAAGSGPAAKQAAKQLTQKLYELKAAIQNALVNRIVQD 1449
Query: 599 FSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXX-XNKST 657
F D +TP+K A P P RE+ F++++ N + S R NK
Sbjct: 1450 FMDVSTPLKQFTEAVLQPEGTPGREQNFNQKSNNLQAFSDRASKTSRMVAAGGACGNKKI 1629
Query: 658 VEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAI 717
E + +S LTPQ+ISA RI + PG++AA EH + +K Q+ D V +M L D+A
Sbjct: 1630 AEILLSSAAQVDSLTPQLISAGRIRMNYPGSKAADEHLQNLKQQYADTVLRMRTLCDQAT 1809
Query: 718 DTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDP 777
D + SEE ++ C+ A+ QPQ +V ++IAR NR+LLVAK+E +NSEDP
Sbjct: 1810 DPADFIKTSEEHMQVYAKLCEDAIHARQPQKMVDNTSNIARLINRVLLVAKQEADNSEDP 1989
Query: 778 KFREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA 834
F E + AA++ L +++ MV DAK VA NI+DP ++ +S R+LG V +VR+A
Sbjct: 1990 VFTERLNAAANRLERSLPAMVGDAKLVATNIADPAAAAAWKNSFQRLLGDVREVRDA 2160
Score = 227 bits (579), Expect = 4e-57
Identities = 126/174 (72%), Positives = 144/174 (82%), Gaps = 2/174 (1%)
Frame = +1
Query: 895 NQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGS-GTKRALIQCAKD 953
NQP+++AAR LH E R+WSSK N+IIAAAKRMA+LMA +S LV S G+KR LI AK
Sbjct: 2365 NQPILIAARGLHQEVRQWSSKDNEIIAAAKRMAILMARLSELVLSDSRGSKRELIATAKK 2544
Query: 954 IAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISD 1013
IA+AS++VTRLAKE+A+QCTD+RIRTNLLQVCERIPTI TQLKILSTVKATMLG SD
Sbjct: 2545 IAEASEDVTRLAKELARQCTDRRIRTNLLQVCERIPTIGTQLKILSTVKATMLGAQG-SD 2721
Query: 1014 EESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTD-AGFTLRWVRKTPWYQ 1066
E+ E ATEMLV NAQNLMQSVKETVR AE ASIKIR+D L+WVR+ PWYQ
Sbjct: 2722 EDRE-ATEMLVGNAQNLMQSVKETVRAAEGASIKIRSDQTSNRLQWVRRQPWYQ 2880
>ref|NM_068703.1| Caenorhabditis elegans
Length = 3045
Score = 363 bits (931), Expect = 7e-98
Identities = 204/484 (42%), Positives = 308/484 (63%), Gaps = 11/484 (2%)
Frame = +1
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHT+TIE+ILEPVAQQ+S LVI+HEE DG A+PDLT PV V AV NL++VG +
Sbjct: 1 MPVFHTKTIENILEPVAQQVSRLVILHEEAN-DGNAMPDLTGPVGMVSRAVGNLIQVGYD 177
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
T ++D+IL++DMPPA +VE + L +++ L+ DPYSVPAR LIDG+RGIL GTS
Sbjct: 178 TCDHSDDRILQQDMPPALQRVEGSSKLLEESSYSLKHDPYSVPARKKLIDGARGILQGTS 357
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
LLL FDE+EVRKIIRVC+ +Y+ V+EV+E+M DL + K++ P + + ++ RQQ
Sbjct: 358 ALLLCFDESEVRKIIRVCRKANDYVAVSEVIESMADLQQFVKDISPVLHDVTNDVNLRQQ 537
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKN-SKNQGIEEALKNRNFTVEKMSA 239
ELTHQ HR +L+ M+++K + P+LI +MK + QG EA+ NRNF ++M+
Sbjct: 538 ELTHQVHREILIRCMDSIKVIAPILICSMKTSIELGTPHPRQGHAEAIANRNFMSQRMTE 717
Query: 240 EINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAI 299
E+NEIIRVLQLT++DED W + + M++AL++ S L A WL DP+A G GE+AI
Sbjct: 718 EMNEIIRVLQLTTYDEDEWDADNVTVMRKALSAAKSLLTAALDWLADPHARSGAVGEKAI 897
Query: 300 RQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQG 359
R+I + A ++ ++ + I + + TD++ +LR GQ P A Q ++
Sbjct: 898 RRICEYADRISARALPEDAQSIKRSIFEITSFTDELCNLRNNGQ---PDRENLAAQTARR 1068
Query: 360 LDVLTAKVENAARKLEAMTNSKQ--------SIAKKIDAAQNWLADP--NGGPEGEEQIR 409
L L ++ +A+ N+++ + A +++ A WL +P + G G + +R
Sbjct: 1069LKDLVGSQNSSGLMGDALQNAQRHGGANPAHTAAGRLEQALRWLDNPGLDDGGLGLQALR 1248
Query: 410 GALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATA 469
A+ARK+A+ +P++R+ +L +I L ++L DL R+G G+SPEA + Q+ A
Sbjct: 1249LLTADARKLADRL-NPQDRNRLLGLCSDIDRLAAQLADLERRGLGNSPEAHQIRNQLKNA 1425
Query: 470 LQNL 473
L++L
Sbjct: 1426LRDL 1437
Score = 243 bits (620), Expect = 8e-62
Identities = 157/476 (32%), Positives = 250/476 (51%), Gaps = 12/476 (2%)
Frame = +1
Query: 371 ARKLEAMTNSKQSIAKKIDAAQNWLADPNG--GPEGEEQIRGALAEARKIAELCDDPKER 428
A + M + + + AA +WLADP+ G GE+ IR A +I+ P++
Sbjct: 778 ADNVTVMRKALSAAKSLLTAALDWLADPHARSGAVGEKAIRRICEYADRISARAL-PEDA 954
Query: 429 DDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNR------AVA 482
I RS+ EI + T +L +LR G+ P+ LA Q A L++L N A+
Sbjct: 955 QSIKRSIFEITSFTDELCNLRNNGQ---PDRENLAAQTARRLKDLVGSQNSSGLMGDALQ 1125
Query: 483 NSRP---AKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQ 539
N++ A A G++EQA RW+DNP +DD G+G A+R L A+ +LA+ + R
Sbjct: 1126 NAQRHGGANPAHTAAGRLEQALRWLDNPGLDDGGLGLQALRLLTADARKLADRLNPQDRN 1305
Query: 540 DLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVF 599
LL C + RG G SP+A + +QL+++L+DL M+ +T V D F
Sbjct: 1306 RLLGLCSDIDRLAAQLADLERRGLGNSPEAHQIRNQLKNALRDLGDFMRRVLTDRVVDDF 1485
Query: 600 SDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXX-XXXXNKSTV 658
+D TTP+K A A P PNRE+ F +++ +HS + +K TV
Sbjct: 1486 ADITTPLKQFVEAVHADPYDPNREQNFVDKSQRLTDHSQSMTTTARLVASCGPSKSKKTV 1665
Query: 659 EGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAID 718
E I + + +LTPQ+++A R+ L NPG++ +HFE + Q+ D + ++ VD+AID
Sbjct: 1666 EAILDTAEKVEQLTPQLVNAGRVRLHNPGSE---QHFENIHKQYADALHRLRSHVDDAID 1836
Query: 719 TKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPK 778
T + ASE A+++ + C+ A+ LV ++ IAR NR+L+ A+ E +NSE+P
Sbjct: 1837 TGEFVRASETAMRRYTNHCEGAINGADAHGLVNNSSQIARLGNRVLMTAQNEADNSEEPS 2016
Query: 779 FREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA 834
F V+ A+D+L I PMV +AK +A N D +++ + +L +V V +A
Sbjct: 2017 FVSRVRNAADQLHNAIPPMVNNAKQIAQNPHDQYAAQNWRGTNDHLLNSVRAVGDA 2184
Score = 213 bits (541), Expect = 1e-52
Identities = 113/183 (61%), Positives = 141/183 (76%), Gaps = 13/183 (7%)
Frame = +1
Query: 895 NQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDI 954
+QPM+ AA LH+E ++WSS+ NDI+AAAKRMA+LMA +S+LVRG GTK+ LI C+K I
Sbjct: 2485 HQPMLAAAHNLHNELKQWSSQENDIVAAAKRMAILMARLSQLVRGEGGTKKDLINCSKAI 2664
Query: 955 AKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTN-ISD 1013
A +S+EVTRLA ++A+ CTD ++RT LLQV ERIPTI+TQLK+LSTVKATMLG ISD
Sbjct: 2665 ADSSEEVTRLAVQLARLCTDIKMRTALLQVSERIPTIATQLKVLSTVKATMLGSAKPISD 2844
Query: 1014 ------------EESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRK 1061
EE ++A + LVHNAQNLMQSVK+ VR AEAASIKIRT++G LRW+RK
Sbjct: 2845 VIGPYGQPVEGSEEDDEAMQQLVHNAQNLMQSVKDVVRAAEAASIKIRTNSGLRLRWLRK 3024
Query: 1062 TPW 1064
W
Sbjct: 3025 PMW 3033
>gb|U07023.1|BMU07023 Brugia malayi vinculin mRNA, complete cds
Length = 3498
Score = 359 bits (921), Expect = 1e-96
Identities = 197/481 (40%), Positives = 298/481 (60%), Gaps = 8/481 (1%)
Frame = +3
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHT+TIE ILEPVAQQ+S LVI+HEE E DG A+ DLT PV AV AV NL++VG +
Sbjct: 237 MPVFHTKTIEGILEPVAQQVSRLVILHEEAE-DGNAVLDLTLPVGAVSRAVDNLIKVGYD 413
Query: 61 TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS 120
T +++D+IL+ DMPPA +VE + L A ML++DPYS AR LI+G+RGIL GTS
Sbjct: 414 TCHSSDDRILQADMPPALQRVEASSRLLEDACHMLRADPYSSVARKKLIEGARGILQGTS 593
Query: 121 DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ 180
LLL+FDE+EVRKIIR C+ +L+YL VAEV+E+M+DL + K++ P +T++++ ID R++
Sbjct: 594 ALLLSFDESEVRKIIRGCRKVLDYLAVAEVIESMDDLAQFVKDISPWLTRVSRNIDAREK 773
Query: 181 ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE 240
ELTHQ HR +L+ M+TVK L P++I AMKIF+ +G +EA +NRN+ ++M+ E
Sbjct: 774 ELTHQVHREILLRCMDTVKTLSPIMICAMKIFIQITEESQRGQQEAAENRNYLAQRMTDE 953
Query: 241 INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR 300
+NEIIRVLQLT++DED W S + M++AL++ S L A WL D G GE+AIR
Sbjct: 954 MNEIIRVLQLTTYDEDEWDSDNVTVMRKALSAAQSLLTSALDWLADSRGRAGATGEKAIR 1133
Query: 301 QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
+I+D + ++ ++ R I T + MTD + +LR +G + +A A ++ + +
Sbjct: 1134RIVDYSERIAARALPEDARLIRATVSDITSMTDSLCELRNQGGDSQGLASGCANRLKELV 1313
Query: 361 ------DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADP--NGGPEGEEQIRGAL 412
+L + + N R T+ ++ +++ A W+ +P + G + ++
Sbjct: 1314GTKEISGILPSALTNTQR--TGGTHPAHTVTGRLEQALRWMDNPGVDDNGLGLQAVKAMT 1487
Query: 413 AEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQN 472
+EA + + + + EI +L DL +G G+ P A A+ Q+ L+
Sbjct: 1488SEAGNLQPIYSHLQNVRKFVDLCVEIDRQADQLADLEHRGLGNPPAAHAIRNQLRNKLRE 1667
Query: 473 L 473
L
Sbjct: 1668L 1670
Score = 222 bits (566), Expect = 1e-55
Identities = 149/460 (32%), Positives = 232/460 (50%), Gaps = 13/460 (2%)
Frame = +3
Query: 388 IDAAQNWLADPNG--GPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKL 445
+ +A +WLAD G G GE+ IR + + +IA P++ I ++ +I ++T L
Sbjct: 1062 LTSALDWLADSRGRAGATGEKAIRRIVDYSERIAARAL-PEDARLIRATVSDITSMTDSL 1238
Query: 446 GDLRRQGKGDSPEARALA---------KQVATALQNLQTKTNRAVANSRPAKAAVHLEGK 496
+LR QG A A K+++ L + T T R + PA G+
Sbjct: 1239 CELRNQGGDSQGLASGCANRLKELVGTKEISGILPSALTNTQRT-GGTHPAHTVT---GR 1406
Query: 497 IEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYR-QDLLAKCDRVXXXXXXX 555
+EQA RW+DNP VDD G+G A++ + +E L + + + C +
Sbjct: 1407 LEQALRWMDNPGVDDNGLGLQAVKAMTSEAGNLQPIYSHLQNVRKFVDLCVEIDRQADQL 1586
Query: 556 XXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
RG G P A A+ +QL++ L++L M++ +T V + F+D +TP+K A A
Sbjct: 1587 ADLEHRGLGNPPAAHAIRNQLRNKLRELVDIMKKVITDRVVEDFADISTPLKQFVDAVYA 1766
Query: 616 PPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXX-XNKSTVEGIQASVKTARELTPQ 674
P NRE F+E+A N ++HS R NK TVE I + +TPQ
Sbjct: 1767 SPTIVNRELSFEEKAHNLDDHSSRCANTALLVAKCGPCKNKKTVEAIIEAANQVNAMTPQ 1946
Query: 675 VISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDL 734
VI A +I L N + A HF+ ++ ++ D + ++ VD+AIDT + ASE+A+++
Sbjct: 1947 VIKAGKIRLHNDSDSANL-HFDNLRREYSDVLNRLRSHVDDAIDTSDFIRASEQAMRQYT 2123
Query: 735 DKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTI 794
C+ A+ N +PQ +V + IAR NR+L+ AK E +NSE+P F V A+ L I
Sbjct: 2124 VYCENAIRNNEPQQMVDNTSQIARFGNRVLMTAKNEADNSEEPSFVHRVNNAARRLHSAI 2303
Query: 795 SPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA 834
PMV AK VA N G +S+ D+ +L AV +V +A
Sbjct: 2304 PPMVNQAKQVALNPRHGGNAQSWRDANEHLLSAVRQVGDA 2423
Score = 211 bits (536), Expect = 4e-52
Identities = 111/179 (62%), Positives = 136/179 (75%), Gaps = 9/179 (5%)
Frame = +3
Query: 895 NQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDI 954
+QP++ AA LH E R+WSS N+I+AAAKRMA+LMA +S+LVRG GTK+ L+ CAK I
Sbjct: 2670 SQPILSAAHNLHQELRQWSSHENEIVAAAKRMAILMARLSQLVRGEGGTKKDLVDCAKAI 2849
Query: 955 AKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNI--- 1011
A +S+EVTRLA ++A+QCT ++R LLQVCERIPTI+TQLKILSTVKATMLG
Sbjct: 2850 ADSSEEVTRLAVQLARQCTVIKMRMTLLQVCERIPTIATQLKILSTVKATMLGSQATIGP 3029
Query: 1012 ------SDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPW 1064
EE E+A + LV NAQNLMQSVK+TVR AEAASIKIRT++G LRW+RK W
Sbjct: 3030 YGQPIDGSEEDEEAMQQLVLNAQNLMQSVKDTVRAAEAASIKIRTNSGLRLRWIRKPMW 3206
>gb|AE003423.1|AE003423 Drosophila melanogaster genomic scaffold 142000013386054 section 7 of 35,
complete sequence
Length = 291976
Score = 347 bits (889), Expect = 5e-93
Identities = 193/473 (40%), Positives = 286/473 (59%), Gaps = 4/473 (0%)
Frame = -2
Query: 15 PVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDM 74
P +Q+S LVI+HEE E DG A+PDL+ PV V AAV+NLV+VG++T+ +++D+IL++DM
Sbjct: 151278 PRDRQVSRLVILHEEAE-DGNAMPDLSRPVQVVSAAVANLVKVGRDTINSSDDKILRQDM 151102
Query: 75 PPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKI 134
P A +VE A L +A+ ML+SDPYS PAR LI+GSRGIL GTS LLL FDE+EVRKI
Sbjct: 151101 PSALHRVEGASQLLEEASDMLRSDPYSGPARKKLIEGSRGILQGTSSLLLCFDESEVRKI 150922
Query: 135 IRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNS 194
I+ CK +L+YL VAEV+ TME LV + K+L P ++K+ + + R++ELTHQ H +LV
Sbjct: 150921 IQECKRVLDYLAVAEVINTMEQLVQFLKDLSPCLSKVHREVGAREKELTHQVHSEILVRC 150742
Query: 195 MNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWD 254
+ VK L P+LI +MK+++ + +G EEA +NRN+ +MS E+ EIIRVLQLT++D
Sbjct: 150741 LEQVKTLAPILICSMKVYIHIVEQQGRGAEEAAENRNYLAARMSDELQEIIRVLQLTTYD 150562
Query: 255 EDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCA 314
ED + +K+ +I +K+ QA WL +P A G GE+A+RQ++D A ++ E C
Sbjct: 150561 EDTSELDNLTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISERCL 150382
Query: 315 GKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKL 374
++ I + M + + +LR G+G SP A + + + L + V A +
Sbjct: 150381 PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAVLGV 150202
Query: 375 E--AMTNSKQSIAKKIDAAQNWLADP--NGGPEGEEQIRGALAEARKIAELCDDPKERDD 430
+ + + +I +++ A WL P N G GE I + E RK+AE C ++
Sbjct: 150201 DKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK--- 150031
Query: 431 ILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVAN 483
EI L ++ L+RQ G P A+ AKQ+ L L+ A+ N
Sbjct: 150030 -----AEIQQLCDEVERLKRQAAGSGPAAKQAAKQLTQKLYELKAAIQNALVN 149887
Score = 263 bits (671), Expect = 9e-68
Identities = 158/477 (33%), Positives = 259/477 (54%), Gaps = 6/477 (1%)
Frame = -2
Query: 364 TAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNG--GPEGEEQIRGALAEARKIAEL 421
T++++N L + +I+ K++ A WL++P G GE+ +R + A +I+E
Sbjct: 150555 TSELDN----LTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISER 150388
Query: 422 CDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRAV 481
C P++ I + E+ A+ + L +LR++GKG SP+A +L + + + L++ ++AV
Sbjct: 150387 CL-PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAV 150211
Query: 482 ANSRPA---KAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYR 538
A + A ++G++EQA +W+ +P ++D G+G+ AI +V EG ++A G +
Sbjct: 150210 LGVDKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK 150031
Query: 539 QDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDV 598
++ CD V + G P A+ A QL L +LKA +Q A+ +
Sbjct: 150030 AEIQQLCDEVERLKR-------QAAGSGPAAKQAAKQLTQKLYELKAAIQNALVNRIVQD 149872
Query: 599 FSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXX-XNKST 657
F D +TP+K A P P RE+ F++++ N + S R NK
Sbjct: 149871 FMDVSTPLKQFTEAVLQPEGTPGREQNFNQKSNNLQAFSDRASKTSRMVAAGGACGNKKI 149692
Query: 658 VEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAI 717
E + +S LTPQ+ISA RI + PG++AA EH + +K Q+ D V +M L D+A
Sbjct: 149691 AEILLSSAAQVDSLTPQLISAGRIRMNYPGSKAADEHLQNLKQQYADTVLRMRTLCDQAT 149512
Query: 718 DTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDP 777
D + SEE ++ C+ A+ QPQ +V ++IAR NR+LLVAK+E +NSEDP
Sbjct: 149511 DPADFIKTSEEHMQVYAKLCEDAIHARQPQKMVDNTSNIARLINRVLLVAKQEADNSEDP 149332
Query: 778 KFREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA 834
F E + AA++ L +++ MV DAK VA NI+DP ++ +S R+LG V +VR+A
Sbjct: 149331 VFTERLNAAANRLERSLPAMVGDAKLVATNIADPAAAAAWKNSFQRLLGDVREVRDA 149161
Score = 198 bits (503), Expect = 3e-48
Identities = 123/213 (57%), Positives = 139/213 (64%), Gaps = 46/213 (21%)
Frame = -2
Query: 900 MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGS-GTKRALIQCAKDIAKAS 958
+AAR LH E R+WSSK N+IIAAAKRMA+LMA +S LV S G+KR LI AK IA+AS
Sbjct: 148821 IAARGLHQEVRQWSSKDNEIIAAAKRMAILMARLSELVLSDSRGSKRELIATAKKIAEAS 148642
Query: 959 DEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQ 1018
++VTRLAKE+A+QCTD+RIRTNLLQVCERIPTI TQLKILSTVKATMLG SDE+ E
Sbjct: 148641 EDVTRLAKELARQCTDRRIRTNLLQVCERIPTIGTQLKILSTVKATMLGAQG-SDEDRE- 148468
Query: 1019 ATEMLVHNAQNLMQS--------------------------------------------V 1034
ATEMLV NAQNLMQS V
Sbjct: 148467 ATEMLVGNAQNLMQSVSLEMLSNCLAKFTGRSRHS*SFWALPLPVPFHC*ILSFYVRFQV 148288
Query: 1035 KETVREAEAASIKIRTD-AGFTLRWVRKTPWYQ 1066
KETVR AE ASIKIR+D L+WVR+ PWYQ
Sbjct: 148287 KETVRAAEGASIKIRSDQTSNRLQWVRRQPWYQ 148189
Score = 42.0 bits (97), Expect = 0.34
Identities = 18/21 (85%), Positives = 21/21 (99%)
Frame = -2
Query: 1 MPVFHTRTIESILEPVAQQIS 21
MPVFHT+TIESIL+PVAQQ+S
Sbjct: 153597 MPVFHTKTIESILDPVAQQVS 153535
>ref|NG_000237.1| Drosophila melanogaster Vinculin (Vinc) on chromosome 1
Length = 12698
Score = 347 bits (889), Expect = 5e-93
Identities = 193/473 (40%), Positives = 286/473 (59%), Gaps = 4/473 (0%)
Frame = +3
Query: 15 PVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDM 74
P +Q+S LVI+HEE E DG A+PDL+ PV V AAV+NLV+VG++T+ +++D+IL++DM
Sbjct: 5271 PRDRQVSRLVILHEEAE-DGNAMPDLSRPVQVVSAAVANLVKVGRDTINSSDDKILRQDM 5447
Query: 75 PPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKI 134
P A +VE A L +A+ ML+SDPYS PAR LI+GSRGIL GTS LLL FDE+EVRKI
Sbjct: 5448 PSALHRVEGASQLLEEASDMLRSDPYSGPARKKLIEGSRGILQGTSSLLLCFDESEVRKI 5627
Query: 135 IRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNS 194
I+ CK +L+YL VAEV+ TME LV + K+L P ++K+ + + R++ELTHQ H +LV
Sbjct: 5628 IQECKRVLDYLAVAEVINTMEQLVQFLKDLSPCLSKVHREVGAREKELTHQVHSEILVRC 5807
Query: 195 MNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWD 254
+ VK L P+LI +MK+++ + +G EEA +NRN+ +MS E+ EIIRVLQLT++D
Sbjct: 5808 LEQVKTLAPILICSMKVYIHIVEQQGRGAEEAAENRNYLAARMSDELQEIIRVLQLTTYD 5987
Query: 255 EDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCA 314
ED + +K+ +I +K+ QA WL +P A G GE+A+RQ++D A ++ E C
Sbjct: 5988 EDTSELDNLTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISERCL 6167
Query: 315 GKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKL 374
++ I + M + + +LR G+G SP A + + + L + V A +
Sbjct: 6168 PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAVLGV 6347
Query: 375 E--AMTNSKQSIAKKIDAAQNWLADP--NGGPEGEEQIRGALAEARKIAELCDDPKERDD 430
+ + + +I +++ A WL P N G GE I + E RK+AE C ++
Sbjct: 6348 DKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK--- 6518
Query: 431 ILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVAN 483
EI L ++ L+RQ G P A+ AKQ+ L L+ A+ N
Sbjct: 6519 -----AEIQQLCDEVERLKRQAAGSGPAAKQAAKQLTQKLYELKAAIQNALVN 6662
Score = 263 bits (671), Expect = 9e-68
Identities = 158/477 (33%), Positives = 259/477 (54%), Gaps = 6/477 (1%)
Frame = +3
Query: 364 TAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNG--GPEGEEQIRGALAEARKIAEL 421
T++++N L + +I+ K++ A WL++P G GE+ +R + A +I+E
Sbjct: 5994 TSELDN----LTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISER 6161
Query: 422 CDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRAV 481
C P++ I + E+ A+ + L +LR++GKG SP+A +L + + + L++ ++AV
Sbjct: 6162 CL-PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAV 6338
Query: 482 ANSRPA---KAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYR 538
A + A ++G++EQA +W+ +P ++D G+G+ AI +V EG ++A G +
Sbjct: 6339 LGVDKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK 6518
Query: 539 QDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDV 598
++ CD V + G P A+ A QL L +LKA +Q A+ +
Sbjct: 6519 AEIQQLCDEVERLKR-------QAAGSGPAAKQAAKQLTQKLYELKAAIQNALVNRIVQD 6677
Query: 599 FSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXX-XNKST 657
F D +TP+K A P P RE+ F++++ N + S R NK
Sbjct: 6678 FMDVSTPLKQFTEAVLQPEGTPGREQNFNQKSNNLQAFSDRASKTSRMVAAGGACGNKKI 6857
Query: 658 VEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAI 717
E + +S LTPQ+ISA RI + PG++AA EH + +K Q+ D V +M L D+A
Sbjct: 6858 AEILLSSAAQVDSLTPQLISAGRIRMNYPGSKAADEHLQNLKQQYADTVLRMRTLCDQAT 7037
Query: 718 DTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDP 777
D + SEE ++ C+ A+ QPQ +V ++IAR NR+LLVAK+E +NSEDP
Sbjct: 7038 DPADFIKTSEEHMQVYAKLCEDAIHARQPQKMVDNTSNIARLINRVLLVAKQEADNSEDP 7217
Query: 778 KFREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA 834
F E + AA++ L +++ MV DAK VA NI+DP ++ +S R+LG V +VR+A
Sbjct: 7218 VFTERLNAAANRLERSLPAMVGDAKLVATNIADPAAAAAWKNSFQRLLGDVREVRDA 7388
Score = 198 bits (503), Expect = 3e-48
Identities = 123/213 (57%), Positives = 139/213 (64%), Gaps = 46/213 (21%)
Frame = +3
Query: 900 MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGS-GTKRALIQCAKDIAKAS 958
+AAR LH E R+WSSK N+IIAAAKRMA+LMA +S LV S G+KR LI AK IA+AS
Sbjct: 7728 IAARGLHQEVRQWSSKDNEIIAAAKRMAILMARLSELVLSDSRGSKRELIATAKKIAEAS 7907
Query: 959 DEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQ 1018
++VTRLAKE+A+QCTD+RIRTNLLQVCERIPTI TQLKILSTVKATMLG SDE+ E
Sbjct: 7908 EDVTRLAKELARQCTDRRIRTNLLQVCERIPTIGTQLKILSTVKATMLGAQG-SDEDRE- 8081
Query: 1019 ATEMLVHNAQNLMQS--------------------------------------------V 1034
ATEMLV NAQNLMQS V
Sbjct: 8082 ATEMLVGNAQNLMQSVSLEMLSNCLAKFTGRSRHS*SFWALPLPVPFHC*ILSFYVRFQV 8261
Query: 1035 KETVREAEAASIKIRTD-AGFTLRWVRKTPWYQ 1066
KETVR AE ASIKIR+D L+WVR+ PWYQ
Sbjct: 8262 KETVRAAEGASIKIRSDQTSNRLQWVRRQPWYQ 8360
Score = 42.0 bits (97), Expect = 0.34
Identities = 18/21 (85%), Positives = 21/21 (99%)
Frame = +3
Query: 1 MPVFHTRTIESILEPVAQQIS 21
MPVFHT+TIESIL+PVAQQ+S
Sbjct: 2961 MPVFHTKTIESILDPVAQQVS 3023
>emb|AL009193.1|DMC103B4 Drosophila melanogaster cosmid clone 103B4
Length = 26697
Score = 347 bits (889), Expect = 5e-93
Identities = 193/473 (40%), Positives = 286/473 (59%), Gaps = 4/473 (0%)
Frame = -3
Query: 15 PVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDM 74
P +Q+S LVI+HEE E DG A+PDL+ PV V AAV+NLV+VG++T+ +++D+IL++DM
Sbjct: 21427 PRDRQVSRLVILHEEAE-DGNAMPDLSRPVQVVSAAVANLVKVGRDTINSSDDKILRQDM 21251
Query: 75 PPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKI 134
P A +VE A L +A+ ML+SDPYS PAR LI+GSRGIL GTS LLL FDE+EVRKI
Sbjct: 21250 PSALHRVEGASQLLEEASDMLRSDPYSGPARKKLIEGSRGILQGTSSLLLCFDESEVRKI 21071
Query: 135 IRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNS 194
I+ CK +L+YL VAEV+ TME LV + K+L P ++K+ + + R++ELTHQ H +LV
Sbjct: 21070 IQECKRVLDYLAVAEVINTMEQLVQFLKDLSPCLSKVHREVGAREKELTHQVHSEILVRC 20891
Query: 195 MNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWD 254
+ VK L P+LI +MK+++ + +G EEA +NRN+ +MS E+ EIIRVLQLT++D
Sbjct: 20890 LEQVKTLAPILICSMKVYIHIVEQQGRGAEEAAENRNYLAARMSDELQEIIRVLQLTTYD 20711
Query: 255 EDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCA 314
ED + +K+ +I +K+ QA WL +P A G GE+A+RQ++D A ++ E C
Sbjct: 20710 EDTSELDNLTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISERCL 20531
Query: 315 GKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKL 374
++ I + M + + +LR G+G SP A + + + L + V A +
Sbjct: 20530 PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAVLGV 20351
Query: 375 E--AMTNSKQSIAKKIDAAQNWLADP--NGGPEGEEQIRGALAEARKIAELCDDPKERDD 430
+ + + +I +++ A WL P N G GE I + E RK+AE C ++
Sbjct: 20350 DKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK--- 20180
Query: 431 ILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVAN 483
EI L ++ L+RQ G P A+ AKQ+ L L+ A+ N
Sbjct: 20179 -----AEIQQLCDEVERLKRQAAGSGPAAKQAAKQLTQKLYELKAAIQNALVN 20036
Score = 263 bits (671), Expect = 9e-68
Identities = 158/477 (33%), Positives = 259/477 (54%), Gaps = 6/477 (1%)
Frame = -3
Query: 364 TAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNG--GPEGEEQIRGALAEARKIAEL 421
T++++N L + +I+ K++ A WL++P G GE+ +R + A +I+E
Sbjct: 20704 TSELDN----LTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISER 20537
Query: 422 CDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRAV 481
C P++ I + E+ A+ + L +LR++GKG SP+A +L + + + L++ ++AV
Sbjct: 20536 CL-PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAV 20360
Query: 482 ANSRPA---KAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYR 538
A + A ++G++EQA +W+ +P ++D G+G+ AI +V EG ++A G +
Sbjct: 20359 LGVDKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK 20180
Query: 539 QDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDV 598
++ CD V + G P A+ A QL L +LKA +Q A+ +
Sbjct: 20179 AEIQQLCDEVERLKR-------QAAGSGPAAKQAAKQLTQKLYELKAAIQNALVNRIVQD 20021
Query: 599 FSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXX-XNKST 657
F D +TP+K A P P RE+ F++++ N + S R NK
Sbjct: 20020 FMDVSTPLKQFTEAVLQPEGTPGREQNFNQKSNNLQAFSDRASKTSRMVAAGGACGNKKI 19841
Query: 658 VEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAI 717
E + +S LTPQ+ISA RI + PG++AA EH + +K Q+ D V +M L D+A
Sbjct: 19840 AEILLSSAAQVDSLTPQLISAGRIRMNYPGSKAADEHLQNLKQQYADTVLRMRTLCDQAT 19661
Query: 718 DTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDP 777
D + SEE ++ C+ A+ QPQ +V ++IAR NR+LLVAK+E +NSEDP
Sbjct: 19660 DPADFIKTSEEHMQVYAKLCEDAIHARQPQKMVDNTSNIARLINRVLLVAKQEADNSEDP 19481
Query: 778 KFREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA 834
F E + AA++ L +++ MV DAK VA NI+DP ++ +S R+LG V +VR+A
Sbjct: 19480 VFTERLNAAANRLERSLPAMVGDAKLVATNIADPAAAAAWKNSFQRLLGDVREVRDA 19310
Score = 198 bits (503), Expect = 3e-48
Identities = 123/213 (57%), Positives = 139/213 (64%), Gaps = 46/213 (21%)
Frame = -3
Query: 900 MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGS-GTKRALIQCAKDIAKAS 958
+AAR LH E R+WSSK N+IIAAAKRMA+LMA +S LV S G+KR LI AK IA+AS
Sbjct: 18970 IAARGLHQEVRQWSSKDNEIIAAAKRMAILMARLSELVLSDSRGSKRELIATAKKIAEAS 18791
Query: 959 DEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQ 1018
++VTRLAKE+A+QCTD+RIRTNLLQVCERIPTI TQLKILSTVKATMLG SDE+ E
Sbjct: 18790 EDVTRLAKELARQCTDRRIRTNLLQVCERIPTIGTQLKILSTVKATMLGAQG-SDEDRE- 18617
Query: 1019 ATEMLVHNAQNLMQS--------------------------------------------V 1034
ATEMLV NAQNLMQS V
Sbjct: 18616 ATEMLVGNAQNLMQSVSLEMLSNCLAKFTGRSRHS*SFWALPLPVPFHC*ILSFYVRFQV 18437
Query: 1035 KETVREAEAASIKIRTD-AGFTLRWVRKTPWYQ 1066
KETVR AE ASIKIR+D L+WVR+ PWYQ
Sbjct: 18436 KETVRAAEGASIKIRSDQTSNRLQWVRRQPWYQ 18338
Score = 42.0 bits (97), Expect = 0.34
Identities = 18/21 (85%), Positives = 21/21 (99%)
Frame = -3
Query: 1 MPVFHTRTIESILEPVAQQIS 21
MPVFHT+TIESIL+PVAQQ+S
Sbjct: 23737 MPVFHTKTIESILDPVAQQVS 23675
>gb|AC104149.6| Drosophila melanogaster X BAC RP98-48O22 (Roswell Park Cancer Institute
Drosophila BAC Library) complete sequence
Length = 193714
Score = 347 bits (889), Expect = 5e-93
Identities = 193/473 (40%), Positives = 286/473 (59%), Gaps = 4/473 (0%)
Frame = -1
Query: 15 PVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDM 74
P +Q+S LVI+HEE E DG A+PDL+ PV V AAV+NLV+VG++T+ +++D+IL++DM
Sbjct: 51007 PRDRQVSRLVILHEEAE-DGNAMPDLSRPVQVVSAAVANLVKVGRDTINSSDDKILRQDM 50831
Query: 75 PPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKI 134
P A +VE A L +A+ ML+SDPYS PAR LI+GSRGIL GTS LLL FDE+EVRKI
Sbjct: 50830 PSALHRVEGASQLLEEASDMLRSDPYSGPARKKLIEGSRGILQGTSSLLLCFDESEVRKI 50651
Query: 135 IRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNS 194
I+ CK +L+YL VAEV+ TME LV + K+L P ++K+ + + R++ELTHQ H +LV
Sbjct: 50650 IQECKRVLDYLAVAEVINTMEQLVQFLKDLSPCLSKVHREVGAREKELTHQVHSEILVRC 50471
Query: 195 MNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWD 254
+ VK L P+LI +MK+++ + +G EEA +NRN+ +MS E+ EIIRVLQLT++D
Sbjct: 50470 LEQVKTLAPILICSMKVYIHIVEQQGRGAEEAAENRNYLAARMSDELQEIIRVLQLTTYD 50291
Query: 255 EDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCA 314
ED + +K+ +I +K+ QA WL +P A G GE+A+RQ++D A ++ E C
Sbjct: 50290 EDTSELDNLTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISERCL 50111
Query: 315 GKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKL 374
++ I + M + + +LR G+G SP A + + + L + V A +
Sbjct: 50110 PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAVLGV 49931
Query: 375 E--AMTNSKQSIAKKIDAAQNWLADP--NGGPEGEEQIRGALAEARKIAELCDDPKERDD 430
+ + + +I +++ A WL P N G GE I + E RK+AE C ++
Sbjct: 49930 DKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK--- 49760
Query: 431 ILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVAN 483
EI L ++ L+RQ G P A+ AKQ+ L L+ A+ N
Sbjct: 49759 -----AEIQQLCDEVERLKRQAAGSGPAAKQAAKQLTQKLYELKAAIQNALVN 49616
Score = 263 bits (671), Expect = 9e-68
Identities = 158/477 (33%), Positives = 259/477 (54%), Gaps = 6/477 (1%)
Frame = -1
Query: 364 TAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNG--GPEGEEQIRGALAEARKIAEL 421
T++++N L + +I+ K++ A WL++P G GE+ +R + A +I+E
Sbjct: 50284 TSELDN----LTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISER 50117
Query: 422 CDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRAV 481
C P++ I + E+ A+ + L +LR++GKG SP+A +L + + + L++ ++AV
Sbjct: 50116 CL-PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAV 49940
Query: 482 ANSRPA---KAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYR 538
A + A ++G++EQA +W+ +P ++D G+G+ AI +V EG ++A G +
Sbjct: 49939 LGVDKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK 49760
Query: 539 QDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDV 598
++ CD V + G P A+ A QL L +LKA +Q A+ +
Sbjct: 49759 AEIQQLCDEVERLKR-------QAAGSGPAAKQAAKQLTQKLYELKAAIQNALVNRIVQD 49601
Query: 599 FSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXX-XNKST 657
F D +TP+K A P P RE+ F++++ N + S R NK
Sbjct: 49600 FMDVSTPLKQFTEAVLQPEGTPGREQNFNQKSNNLQAFSDRASKTSRMVAAGGACGNKKI 49421
Query: 658 VEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAI 717
E + +S LTPQ+ISA RI + PG++AA EH + +K Q+ D V +M L D+A
Sbjct: 49420 AEILLSSAAQVDSLTPQLISAGRIRMNYPGSKAADEHLQNLKQQYADTVLRMRTLCDQAT 49241
Query: 718 DTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDP 777
D + SEE ++ C+ A+ QPQ +V ++IAR NR+LLVAK+E +NSEDP
Sbjct: 49240 DPADFIKTSEEHMQVYAKLCEDAIHARQPQKMVDNTSNIARLINRVLLVAKQEADNSEDP 49061
Query: 778 KFREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA 834
F E + AA++ L +++ MV DAK VA NI+DP ++ +S R+LG V +VR+A
Sbjct: 49060 VFTERLNAAANRLERSLPAMVGDAKLVATNIADPAAAAAWKNSFQRLLGDVREVRDA 48890
Score = 198 bits (503), Expect = 3e-48
Identities = 123/213 (57%), Positives = 139/213 (64%), Gaps = 46/213 (21%)
Frame = -1
Query: 900 MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGS-GTKRALIQCAKDIAKAS 958
+AAR LH E R+WSSK N+IIAAAKRMA+LMA +S LV S G+KR LI AK IA+AS
Sbjct: 48550 IAARGLHQEVRQWSSKDNEIIAAAKRMAILMARLSELVLSDSRGSKRELIATAKKIAEAS 48371
Query: 959 DEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQ 1018
++VTRLAKE+A+QCTD+RIRTNLLQVCERIPTI TQLKILSTVKATMLG SDE+ E
Sbjct: 48370 EDVTRLAKELARQCTDRRIRTNLLQVCERIPTIGTQLKILSTVKATMLGAQG-SDEDRE- 48197
Query: 1019 ATEMLVHNAQNLMQS--------------------------------------------V 1034
ATEMLV NAQNLMQS V
Sbjct: 48196 ATEMLVGNAQNLMQSVSLEMLSNCLAKFTGRSRHS*SFWALPLPVPFHC*ILSFYVRFQV 48017
Query: 1035 KETVREAEAASIKIRTD-AGFTLRWVRKTPWYQ 1066
KETVR AE ASIKIR+D L+WVR+ PWYQ
Sbjct: 48016 KETVRAAEGASIKIRSDQTSNRLQWVRRQPWYQ 47918
Score = 42.0 bits (97), Expect = 0.34
Identities = 18/21 (85%), Positives = 21/21 (99%)
Frame = -1
Query: 1 MPVFHTRTIESILEPVAQQIS 21
MPVFHT+TIESIL+PVAQQ+S
Sbjct: 53326 MPVFHTKTIESILDPVAQQVS 53264
>emb|X96601.1|DMVIN D.melanogaster vinculin gene
Length = 8171
Score = 344 bits (882), Expect = 3e-92
Identities = 191/473 (40%), Positives = 286/473 (60%), Gaps = 4/473 (0%)
Frame = +1
Query: 15 PVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDM 74
P +Q+S LVI+HEE E DG A+PDL+ PV V AAV+NLV+VG++T+ +++D+IL++DM
Sbjct: 4333 PRDRQVSRLVILHEEAE-DGNAMPDLSRPVQVVSAAVANLVKVGRDTINSSDDKILRQDM 4509
Query: 75 PPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKI 134
P A +VE A L +A+ +++SDPYS PAR LI+GSRGIL GTS LLL FDE+EVRKI
Sbjct: 4510 PSALHRVEGASQLLEEASDIVRSDPYSGPARKKLIEGSRGILQGTSSLLLCFDESEVRKI 4689
Query: 135 IRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNS 194
I+ CK +L+YL VAEV+ TME LV + K+L P ++K+ + + R++ELTHQ H +LV
Sbjct: 4690 IQECKRVLDYLAVAEVINTMEQLVQFLKDLSPCLSKVHREVGAREKELTHQVHSEILVRC 4869
Query: 195 MNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWD 254
+ VK L P+LI +MK+++ + +G EEA +NRN+ +MS E+ EIIRVLQLT++D
Sbjct: 4870 LEQVKTLAPILICSMKVYIHIVEQQGRGAEEAAENRNYLAARMSDELQEIIRVLQLTTYD 5049
Query: 255 EDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCA 314
ED + +K+ +I +K+ QA WL +P A G GE+A+RQ++D A ++ E C
Sbjct: 5050 EDTSELDNLTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISERCL 5229
Query: 315 GKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKL 374
++ I + M + + +LR G+G SP A + + + L + V A +
Sbjct: 5230 PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAVLGV 5409
Query: 375 E--AMTNSKQSIAKKIDAAQNWLADP--NGGPEGEEQIRGALAEARKIAELCDDPKERDD 430
+ + + +I +++ A WL P N G GE I + E RK+AE C ++
Sbjct: 5410 DKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK--- 5580
Query: 431 ILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVAN 483
EI L ++ L+RQ G P A+ AKQ+ L L+ A+ N
Sbjct: 5581 -----AEIQQLCDEVERLKRQAAGSGPAAKQAAKQLTQKLYELKAAIQNALVN 5724
Score = 262 bits (669), Expect = 2e-67
Identities = 158/477 (33%), Positives = 259/477 (54%), Gaps = 6/477 (1%)
Frame = +1
Query: 364 TAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNG--GPEGEEQIRGALAEARKIAEL 421
T++++N L + +I+ K++ A WL++P G GE+ +R + A +I+E
Sbjct: 5056 TSELDN----LTVLKKLSNAISNKMEQANEWLSNPYALRGGVGEKALRQVIDNATEISER 5223
Query: 422 CDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRAV 481
C P++ I + E+ A+ + L +LR++GKG SP+A +L + + + L++ ++AV
Sbjct: 5224 CL-PQDSYPIRKLADEVTAMANTLCELRQEGKGQSPQAESLVRGIRDRMGELKSLVHQAV 5400
Query: 482 ANSRPA---KAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYR 538
A + A ++G++EQA +W+ +P ++D G+G+ AI +V EG ++A G +
Sbjct: 5401 LGVDKAGVQQTAHTIQGRLEQAVKWLQHPEINDGGLGERAINLIVEEGRKVAEGCPGHQK 5580
Query: 539 QDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDV 598
++ CD V + G P A+ A QL L +LKA +Q A+ +
Sbjct: 5581 AEIQQLCDEVERLKR-------QAAGSGPAAKQAAKQLTQKLYELKAAIQNALVNRIVQD 5739
Query: 599 FSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXX-XNKST 657
F D +TP+K A P P RE+ F++++ N + S R NK
Sbjct: 5740 FMDVSTPLKQFTEAVLQPEGTPGREQNFNQKSNNLQAFSDRASKTSRMVAAGGACGNKKI 5919
Query: 658 VEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAI 717
E + +S LTPQ+ISA RI + PG++AA EH + +K Q+ D V +M L D+A
Sbjct: 5920 AEILLSSAAQVDSLTPQLISAGRIRMNYPGSKAADEHLQNLKQQYADTVLRMRTLCDQAT 6099
Query: 718 DTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDP 777
D + SEE ++ C+ A+ QPQ +V ++IAR NR+LLVAK+E +NSEDP
Sbjct: 6100 DPADFIKTSEEHMQVYAKLCEDAIHARQPQKMVDNTSNIARLINRVLLVAKQEADNSEDP 6279
Query: 778 KFREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA 834
F E + AA++ L +++ MV DAK VA NI+DP ++ +S R+LG V +VR+A
Sbjct: 6280 VFTERLNAAANRLERSLPAMVGDAKLVATNIADPRAAAAWKNSFQRLLGDVREVRDA 6450
Score = 198 bits (503), Expect = 3e-48
Identities = 123/213 (57%), Positives = 139/213 (64%), Gaps = 46/213 (21%)
Frame = +2
Query: 900 MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGS-GTKRALIQCAKDIAKAS 958
+AAR LH E R+WSSK N+IIAAAKRMA+LMA +S LV S G+KR LI AK IA+AS
Sbjct: 6794 IAARGLHQEVRQWSSKDNEIIAAAKRMAILMARLSELVLSDSRGSKRELIATAKKIAEAS 6973
Query: 959 DEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQ 1018
++VTRLAKE+A+QCTD+RIRTNLLQVCERIPTI TQLKILSTVKATMLG SDE+ E
Sbjct: 6974 EDVTRLAKELARQCTDRRIRTNLLQVCERIPTIGTQLKILSTVKATMLGAQG-SDEDRE- 7147
Query: 1019 ATEMLVHNAQNLMQS--------------------------------------------V 1034
ATEMLV NAQNLMQS V
Sbjct: 7148 ATEMLVGNAQNLMQSVSLEMLSNCLAKFTGRSCHS*SFWALPLPVPFHC*ILSFIVRFQV 7327
Query: 1035 KETVREAEAASIKIRTD-AGFTLRWVRKTPWYQ 1066
KETVR AE ASIKIR+D L+WVR+ PWYQ
Sbjct: 7328 KETVRAAEGASIKIRSDQTSNRLQWVRRQPWYQ 7426
Score = 39.3 bits (90), Expect = 2.2
Identities = 17/19 (89%), Positives = 19/19 (99%)
Frame = +1
Query: 1 MPVFHTRTIESILEPVAQQ 19
MPVFHT+TIESIL+PVAQQ
Sbjct: 2029 MPVFHTKTIESILDPVAQQ 2085
>emb|Z19540.1|SSMTVINA S.scrofa metavinculin cDNA
Length = 676
Score = 322 bits (826), Expect = 1e-85
Identities = 165/177 (93%), Positives = 171/177 (96%)
Frame = +1
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQ 949
+ + +NQP++ AA+ LH EA KWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQ
Sbjct: 142 SSQPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQ 321
Query: 950 CAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRT 1009
CAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRT
Sbjct: 322 CAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRT 501
Query: 1010 NISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
NISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
Sbjct: 502 NISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 672
>emb|Z19541.1|XLMTVINA X.laevis metavinculin cDNA
Length = 748
Score = 321 bits (823), Expect = 2e-85
Identities = 164/176 (93%), Positives = 169/176 (95%)
Frame = +1
Query: 891 GEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQC 950
G+ +NQPM+ AA+ LH EA KWSSKGNDIIAAAKRMALLMAEMSRLVRGGSG KRALIQC
Sbjct: 178 GQPVNQPMLAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQC 357
Query: 951 AKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTN 1010
AKDIAKASDEVT+LAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTN
Sbjct: 358 AKDIAKASDEVTKLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTN 537
Query: 1011 ISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ 1066
ISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRW RKTPWYQ
Sbjct: 538 ISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWARKTPWYQ 705
>gb|AC084630.1|CBRG45E13 Caenorhabditis briggsae cosmid G45E13, complete sequence
Length = 39246
Score = 246 bits (629), Expect = 7e-63
Identities = 146/381 (38%), Positives = 219/381 (57%), Gaps = 17/381 (4%)
Frame = -3
Query: 57 VGKETVQTTEDQILKRDMPPAFIKVENACTKLVQAAQML----------------QSDPY 100
VG +T ++D+IL++DMPPA +VE + L +++ L Q DPY
Sbjct: 37654 VGYDTCDHSDDRILQQDMPPALQRVEGSSKLLEESSYSLKVRRTQN*FHPLKNAFQHDPY 37475
Query: 101 SVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTY 160
SVPAR LIDG+RGIL GTS LLL FDE+EVRKIIR+C+ + +Y+ V+EV+E+M DL +
Sbjct: 37474 SVPARKKLIDGARGILQGTSALLLCFDESEVRKIIRICRKVNDYVAVSEVIESMADLQQF 37295
Query: 161 TKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKN-SK 219
K++ P + + ++ RQQELTHQ HR +L+ ++++K + PVLI +MK + N
Sbjct: 37294 VKDISPVLHDVTNDVNLRQQELTHQVHREILIRCLDSIKTIAPVLICSMKTSIELGNPHP 37115
Query: 220 NQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQ 279
QG EA+ NRNF ++M+ E+NEIIRVLQLT++DED W + + M++AL++ S L
Sbjct: 37114 RQGHAEAVANRNFMSQRMTEEMNEIIRVLQLTTYDEDEWDADNVTVMRKALSAAKSLLTA 36935
Query: 280 AKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLR 339
A WL DP A PG GE+AIR+I + A ++ ++ + I + + TD++ +LR
Sbjct: 36934 ALDWLADPQARPGAVGEKAIRRICEYAERIAARALPEDAQSIKRSIFEITSFTDELCNLR 36755
Query: 340 ARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPN 399
GQ + L A+ AR+L+ + + S DA QN A +
Sbjct: 36754 NNGQ--------------HDRENLAAQ---TARRLKDLVGGQHSSGLMSDALQN--AQRH 36632
Query: 400 GGPEGEEQIRGALAEARKIAE 420
GG G L +A ++ E
Sbjct: 36631 GGANPAHTAAGRLEQAMRLVE 36569
Score = 141 bits (355), Expect = 4e-31
Identities = 82/163 (50%), Positives = 107/163 (65%), Gaps = 17/163 (10%)
Frame = -1
Query: 895 NQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDI 954
+QPM+ AA LH+E ++WSS+ NDI+AAAKRMA+LMA +S+LVRG GTK+ LI C+K I
Sbjct: 33153 HQPMLAAAHNLHNELKQWSSQENDIVAAAKRMAILMARLSQLVRGEGGTKKDLINCSKAI 32974
Query: 955 AKASDEVTRLAKEVAKQCTDKRIRT---------------NLLQVCERIPTISTQLKILS 999
A +S+EVTRLA ++A+ CTD ++RT LLQV ERIPTI+TQLK+LS
Sbjct: 32973 ADSSEEVTRLAVQLARLCTDIKMRTVRNTTF*IL*FSNFQALLQVSERIPTIATQLKVLS 32794
Query: 1000 TVKATMLGRTNISDEESEQATEMLVHNA--QNLMQSVKETVRE 1040
TVKATMLG S E L H + +V ET+ +
Sbjct: 32793 TVKATMLG--------SASEFEALYHELS*HEMYSNVTETITD 32689
Score = 108 bits (271), Expect = 2e-21
Identities = 85/348 (24%), Positives = 144/348 (40%), Gaps = 94/348 (27%)
Frame = -2
Query: 537 YRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVS 596
+R LL C + RG G SP+A+ + +QL+++L+DL M+ +T V
Sbjct: 36317 FRNRLLGLCSDIDRLAAQLADLERRGLGNSPEAQQIRNQLRNALRDLGDFMRRVLTDRVV 36138
Query: 597 ----------------------------DVFSDTTTPIKLLAVAATAPPDAPNREEVFDE 628
D F+D TTP+K A A P PNRE+ F +
Sbjct: 36137 SFSFIFCFPLCRIISENYNKNQGF*FQVDDFADITTPLKQFVEAVHADPYDPNREQNFVD 35958
Query: 629 RAANFENHSGRLXXXXXXXXXXX-XXNKSTVEGIQASVKTARELTPQVISAARILLRNPG 687
++ +HS + +K TVE I + + +LTPQ+++A R+ L NPG
Sbjct: 35957 KSQRLTDHSQSMTTTARLVASCGPSKSKKTVEAILDTAEKVEQLTPQIVNAGRVRLHNPG 35778
Query: 688 NQAAYEH----------------------------------------FETMKN------- 700
++ +E+ F T+++
Sbjct: 35777 SEQHFENIHK*VYLLLLCGSLFRKFDCL*KALACPKSQFLL**YFFCF*TLRHSKTKNIY 35598
Query: 701 --QWIDNVEKMTGLVDEAIDTKSLLDASE----------------EAIKKDLDKCKVAMA 742
Q+ D + ++ VD+AIDT + ASE +A+++ + C+ A+
Sbjct: 35597 FRQYADALHRLRSHVDDAIDTGEFVRASESVRNIPIIQNNENIKFQAMRRYTNNCEGAIN 35418
Query: 743 NIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDEL 790
+V ++ IAR NR+L+ A+ E +NSE+P F V+ A+D+L
Sbjct: 35417 GGDAHGMVNNSSQIARLGNRVLMTAQNEADNSEEPSFVSRVRNAADQL 35274
Score = 75.1 bits (183), Expect = 4e-11
Identities = 35/51 (68%), Positives = 42/51 (81%)
Frame = -2
Query: 1014 EESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPW 1064
EE ++A + LVHNAQNLMQSVK+ VR AEAASIKIRT++G LRW+RK W
Sbjct: 32483 EEDDEAMQQLVHNAQNLMQSVKDVVRAAEAASIKIRTNSGLRLRWLRKPMW 32331
Score = 46.6 bits (109), Expect = 0.014
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = -1
Query: 19 QISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGK 59
++S LVI+HEE DG A+PDLT PV V AV NL++V K
Sbjct: 38385 KVSRLVILHEEAN-DGNAMPDLTGPVGMVSRAVGNLIQVRK 38266
Score = 37.7 bits (86), Expect = 6.5
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = -1
Query: 502 RWIDNPTVDDRGVGQAAIRGLVAEGHRLAN 531
RW+DNP +DD G+G AIR L A+ +LA+
Sbjct: 36534 RWLDNPGLDDGGLGLQAIRLLTADARKLAD 36445
Score = 35.0 bits (79), Expect(2) = 0.15
Identities = 17/43 (39%), Positives = 23/43 (52%)
Frame = -2
Query: 318 RREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
R +LG C + ++ Q+ADL RG G SP A Q Q+ L
Sbjct: 36314 RNRLLGLCSDIDRLAAQLADLERRGLGNSPEAQQIRNQLRNAL 36186
Score = 26.9 bits (58), Expect(2) = 0.15
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 283 WLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREIL 322
WL +P G G QAIR + +A K+ + ++R IL
Sbjct: 36531 WLDNPGLDDGGLGLQAIRLLTADARKLADRLNPQDR*HIL 36412
>ref|NM_068704.1| Caenorhabditis elegans
Length = 1122
Score = 213 bits (541), Expect = 1e-52
Identities = 113/183 (61%), Positives = 141/183 (76%), Gaps = 13/183 (7%)
Frame = +1
Query: 895 NQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDI 954
+QPM+ AA LH+E ++WSS+ NDI+AAAKRMA+LMA +S+LVRG GTK+ LI C+K I
Sbjct: 562 HQPMLAAAHNLHNELKQWSSQENDIVAAAKRMAILMARLSQLVRGEGGTKKDLINCSKAI 741
Query: 955 AKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTN-ISD 1013
A +S+EVTRLA ++A+ CTD ++RT LLQV ERIPTI+TQLK+LSTVKATMLG ISD
Sbjct: 742 ADSSEEVTRLAVQLARLCTDIKMRTALLQVSERIPTIATQLKVLSTVKATMLGSAKPISD 921
Query: 1014 ------------EESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRK 1061
EE ++A + LVHNAQNLMQSVK+ VR AEAASIKIRT++G LRW+RK
Sbjct: 922 VIGPYGQPVEGSEEDDEAMQQLVHNAQNLMQSVKDVVRAAEAASIKIRTNSGLRLRWLRK 1101
Query: 1062 TPW 1064
W
Sbjct: 1102 PMW 1110
>dbj|D25281.1|MUSANCI Mouse mRNA for alpha N-catenin I, complete cds
Length = 3911
Score = 171 bits (432), Expect = 5e-40
Identities = 178/710 (25%), Positives = 289/710 (40%), Gaps = 50/710 (7%)
Frame = +1
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAA-----LTSKLGDLRRQGKGDSPE 458
G+E ++ AR+ EL DP RD++ + G + T+ LR +
Sbjct: 820 GKEMVKLNYVAARRQQEL-KDPHCRDEMAAARGALKKNATMLYTASQAFLRHPDVAATRA 996
Query: 459 ARALA-KQVATALQNLQTKTNRAVANSRPAKAAVHLE-GKIEQAQRWIDNPTV-DDRGVG 515
R KQV A+ + ++ A A S +A H G++ A DN + D
Sbjct: 997 NRDYVFKQVQEAIAGI---SSAAQATSPTDEAKGHTGIGELAAALNEFDNKIILDPMTFS 1167
Query: 516 QAAIRGLVAEGHRLANVMMGPY------------RQDLLAKCDRVXXXXXXXXXXXXRGE 563
+A R + E RL +++ G R+ ++A+C+ V
Sbjct: 1168 EARFRPSLEE--RLESIISGAALMADSSCTRDDRRERMVAECNAVRQALQDLLSEDMNNT 1341
Query: 564 GESPQARAL---ASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAP 620
G + L ++ +DL+ Q+++A+ +SD F +T P+ +L AA +
Sbjct: 1342 GRKEKGDPLNIAIDKMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSG---- 1509
Query: 621 NREEVFDERAANFENHSGRLXXXXXXXXXXXXXNKSTVEGIQASVKTARELTPQVISAAR 680
N +EV E A F H+ +L N+ V+ ++ + L PQVI+AA
Sbjct: 1510 NEKEV-KEYAQVFREHANKLVEVANLACSISN-NEEGVKLVRMAATQIDSLCPQVINAAL 1683
Query: 681 ILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVA 740
L P ++ A ++ + K+QW V +T VD+ L SE I +D++KC +A
Sbjct: 1684 TLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCVIA 1863
Query: 741 MANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMD 800
+ L A +I RA R++ + E+EN E + E V A+ LS+T+ P +
Sbjct: 1864 LQEGDVDTLDRTAGAIRGRAARVIHIINAEMENYEAGVYTEKVLEATKLLSETVMPRFAE 2043
Query: 801 -----AKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLT 855
+A++ N+ P + F+D+ + V +R+A R
Sbjct: 2044 QVEVAIEALSANVPQPFEENEFIDASRLVYYGVRDIRKA--------------VLMIRTP 2181
Query: 856 DELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQ-PMMMAAR----------- 903
+EL Q A ++ Q P A+
Sbjct: 2182 EELEDDSDFEQEDYDVRSRTSVQTEDRQLIAGQSARAIMAQLPQEEKAKIAEQVEIFHQE 2361
Query: 904 --QLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASD 959
+L E KW GNDII AK+M ++M EM+ RG K +I AK IA+A
Sbjct: 2362 KSKLDAEVAKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEAGS 2541
Query: 960 EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQA 1019
+ +LA+ VA QC D + +LL +RI QL I S VKA + +
Sbjct: 2542 RMDKLARAVADQCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELIVSGLDS 2721
Query: 1020 TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRWVRKTP 1063
+ L+ A+NLM +V TV+ + AS K + G + W K P
Sbjct: 2722 STSLIQAAKNLMNAVVLTVKASYVASTKYQKVYGTAAVNSPVVSWKMKAP 2871
Score = 83.2 bits (204), Expect = 1e-13
Identities = 84/373 (22%), Positives = 156/373 (41%), Gaps = 4/373 (1%)
Frame = +1
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T T+E +LEP+ Q++ LV +G K A V A+V+ A N + G++ +
Sbjct: 343 TLTVERLLEPLVTQVTTLVNTSNKGPSGKKKGRSKKAHVLAASVEQATQNFLEKGEQIAK 522
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
++D LK ++ A V A+ DP S R ++ +R +LS + LL
Sbjct: 523 ESQD--LKEELVAAVEDVRKQGETKRIASSEFADDPCSSVKRGTMVRAARALLSAVTRLL 696
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V +++ K + E L + +DL K G M K+ + RQQEL
Sbjct: 697 ILADMADVMRLLSHLKIVEEALEAVKNATNEQDLANRFKEFGKEMVKLNYVAARRQQELK 876
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
R + + +K+ +L +A + F+ ++ + NR++ +++ I
Sbjct: 877 DPHCRDEMAAARGALKKNATMLYTASQAFL-----RHPDVAATRANRDYVFKQVQEAIAG 1041
Query: 244 IIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQIL 303
I Q TS ++A + AL D+K+ + P + E+ + I+
Sbjct: 1042ISSAAQATSPTDEAKGHTGIGELAAALNEFDNKIILDPMTFSEARFRP--SLEERLESII 1215
Query: 304 DEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLD 361
A + + C +RRE ++ C + Q + G +K ++ +D
Sbjct: 1216SGAALMADSSCTRDDRRERMVAECNAVRQALQDLLSEDMNNTGRK----EKGDPLNIAID 1383
Query: 362 VLTAKVENAARKL 374
+T K + R+L
Sbjct: 1384KMTKKTRDLRRQL 1422
>dbj|D11090.1|CHKANC Chicken mRNA for alpha N-catenin, complete cds
Length = 3123
Score = 167 bits (424), Expect = 4e-39
Identities = 180/712 (25%), Positives = 288/712 (40%), Gaps = 52/712 (7%)
Frame = +2
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAA-----LTSKLGDLRRQGKGDSPE 458
G+E ++ AR+ EL DP RD++ + G + T+ LR +
Sbjct: 662 GKEMVKLNYVAARRQQEL-KDPHCRDEMAAARGALKKNATMLYTASQAFLRHPDVAATRA 838
Query: 459 ARALA-KQVATALQNLQTKTNRAVANSRPAKAAVHLE-GKIEQAQRWIDNPTV-DDRGVG 515
R KQV A+ + +N A A S + H G++ A DN + D
Sbjct: 839 NRDYVFKQVQEAIAGI---SNAAQATSPTDENKGHTGIGELAAALNEFDNKIILDPMTFS 1009
Query: 516 QAAIRGLVAEGHRLANVMMGPY------------RQDLLAKCDRVXXXXXXXXXX----- 558
+A R + E RL +++ G R+ ++A+C R
Sbjct: 1010 EARFRPSLEE--RLESIISGAALMADSSCTRDDRRKRIVAECKRAVRQALQDLLSEYMNN 1183
Query: 559 XXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPD 618
R E P A+ ++ +DL+ Q+++A+ +SD F +T P+ +L AA +
Sbjct: 1184 TGRKEKGDPLNIAI-DKMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSG-- 1354
Query: 619 APNREEVFDERAANFENHSGRLXXXXXXXXXXXXXNKSTVEGIQASVKTARELTPQVISA 678
N +EV E A F H+ +L N+ V+ ++ + L PQVI+A
Sbjct: 1355 --NEKEV-KEYAQVFREHANKLVEVANLACSISN-NEEGVKLVRMAATQIDSLCPQVINA 1522
Query: 679 ARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCK 738
A L P ++ A ++ + K+QW V +T VD+ L SE I +D++KC
Sbjct: 1523 ALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCV 1702
Query: 739 VAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMV 798
+A+ L A +I RA R++ + E+EN E + E V A+ LS+T+ P
Sbjct: 1703 IALQEGDVDTLDRTAGAIRGRAARVIHIINAEMENYETGVYTEKVLEATKLLSETVMPRF 1882
Query: 799 MD-----AKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXR 853
+ +A++ N+ P + F+D+ + V +R+A R
Sbjct: 1883 AEQVEVAIEALSANVPQPFEENEFIDASRLVYDGVRDIRKA--------------VLMIR 2020
Query: 854 LTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQ-PMMMAAR--------- 903
+EL Q A ++ Q P A+
Sbjct: 2021 TPEELEDDSDFEQEDYDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEEKAKIAEQVEIFH 2200
Query: 904 ----QLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKA 957
+L E KW GNDII AK+M ++M EM+ RG K +I AK IA+A
Sbjct: 2201 QEKSKLDAEVAKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEA 2380
Query: 958 SDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESE 1017
+ +LA+ VA QC D + +LL +RI QL I S VKA +
Sbjct: 2381 GSRMDKLARAVADQCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELIVSGL 2560
Query: 1018 QATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRWVRKTP 1063
+ L+ A+NLM +V TV+ + AS K + G + W K P
Sbjct: 2561 DSATSLIQAAKNLMNAVVLTVKASYVASTKYQKVYGTAAVNSPVVSWKMKAP 2716
Score = 79.3 bits (194), Expect = 2e-12
Identities = 82/373 (21%), Positives = 157/373 (41%), Gaps = 4/373 (1%)
Frame = +2
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T T+E +LEP+ Q++ LV +G K A V A+V+ A N + G + +
Sbjct: 185 TLTVERLLEPLVTQVTTLVNTSNKGPSGKKKGRSKKAHVLAASVEQATQNFLEKGDQIAK 364
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
++D LK ++ A V + A+ DP S R ++ +R +LS + LL
Sbjct: 365 ESQD--LKEELVAAVEDVRKQGETMRIASSEFADDPCSSVKRGTMVRAARALLSAVTRLL 538
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V +++ K + E L + +DL K G M K+ + RQQEL
Sbjct: 539 ILADMADVMRLLSHLKIVEEALEAVKNATNEQDLANRFKEFGKEMVKLNYVAARRQQELK 718
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
R + + +K+ +L +A + F+ ++ + NR++ +++ I
Sbjct: 719 DPHCRDEMAAARGALKKNATMLYTASQAFL-----RHPDVAATRANRDYVFKQVQEAIAG 883
Query: 244 IIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQIL 303
I Q TS ++ + AL D+K+ + P + E+ + I+
Sbjct: 884 ISNAAQATSPTDENKGHTGIGELAAALNEFDNKIILDPMTFSEARFRP--SLEERLESII 1057
Query: 304 DEAGKVGELCAGKE--RREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLD 361
A + + ++ R+ I+ CK + + DL + + +K ++ +D
Sbjct: 1058SGAALMADSSCTRDDRRKRIVAECKR--AVRQALQDLLSEYMN-NTGRKEKGDPLNIAID 1228
Query: 362 VLTAKVENAARKL 374
+T K + R+L
Sbjct: 1229KMTKKTRDLRRQL 1267
>gb|U34687.1|LVU34687 Lytechinus variegatus alpha catenin mRNA, complete cds
Length = 2930
Score = 166 bits (420), Expect = 1e-38
Identities = 147/550 (26%), Positives = 237/550 (42%), Gaps = 24/550 (4%)
Frame = +3
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQ---DSLKDLKAQMQEAMTQE 594
R+ ++A+C+ V G ++ L ++ KDL+ Q+++A+
Sbjct: 1086 RERIVAECNAVRQALQDLLSEYMNCAGSRDRSDPLDEAIERMCKKTKDLRRQLRKAVVDH 1265
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXN 654
VSD F +T P+ +L VAA + N EV ++ A F+ H+ +L N
Sbjct: 1266 VSDSFLETNVPLLVLIVAAKSG----NEAEV-EKYAKVFQEHANKLVEVANLACSMSN-N 1427
Query: 655 KSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
+ V+ ++ + L PQVI+AARIL+ P ++AA ++ + K+QW V +T VD
Sbjct: 1428 EEGVKMVRMAATQIENLCPQVINAARILVARPRSKAAQDNMDVFKDQWETQVRLLTEAVD 1607
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
E L SE I +D+++C +A+ P+ L A S+ R+ RI V E+ N
Sbjct: 1608 EITTIDDFLAVSESHILEDVNRCVMALHQQDPETLDLTANSVKGRSARICTVVNSEMLNY 1787
Query: 775 E----DPKFREAVKAASDELSKTISPMV-MDAKAVAGNISDPGLQKSFLDSGYRILGAVA 829
E K +EAV +E+ S MV + A++ + F+D+ + V
Sbjct: 1788 EPGLYTDKVKEAVNILKNEVIPHFSNMVEIAVDALSSQPPKDTEENEFVDASRMVYDGVR 1967
Query: 830 KVREAXXXXXX-XXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 888
++R A D +
Sbjct: 1968 EIRRAVLMNRNPDEIETDTEVDYEEEYDVKSKSSYQTEPYELEDVQEGVTSRAMMRDLPP 2147
Query: 889 KAGEVINQPMMMAARQ---LHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKR 945
+ E I + + + ++ L E KW GNDII A++M ++M EM+ RG K
Sbjct: 2148 EEKEKIKEQVELFRQEKEKLDLEMAKWDDSGNDIIILARQMCMIMMEMTDFTRGKGKLKT 2327
Query: 946 AL--IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA 1003
+ I AK IA+ ++ +LA+++A QC D + +LL +RI QL I S VKA
Sbjct: 2328 TMDVINAAKRIAETGTKLDKLARQIADQCPDSSSKEDLLAYLQRIALYCHQLNITSKVKA 2507
Query: 1004 TMLGRTNISDE---ESEQATEMLVHNAQNLMQSVKETVREAEAASIKIR-------TDAG 1053
+ NIS E + L+ A+NLM SV +TV+ + AS K R T A
Sbjct: 2508 EI---QNISGELVLSGLDSATSLIQAAKNLMGSVVQTVKASYVASTKFRSKMQGAGTTAS 2678
Query: 1054 FTLRWVRKTP 1063
+ W K P
Sbjct: 2679 PVVLWKMKAP 2708
>gb|BC000385.1|BC000385 Homo sapiens, clone MGC:8429 IMAGE:2821111, mRNA, complete cds
Length = 3440
Score = 165 bits (417), Expect = 3e-38
Identities = 141/545 (25%), Positives = 224/545 (40%), Gaps = 19/545 (3%)
Frame = +3
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKAQMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ Q+++A+
Sbjct: 1062 RERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1241
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXN 654
VSD F +T P+ +L AA N +EV E A F H+ +L N
Sbjct: 1242 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISN-N 1403
Query: 655 KSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
+ V+ ++ S L PQVI+AA L P ++ A E+ + K QW V +T VD
Sbjct: 1404 EEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVD 1583
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1584 DITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNY 1763
Query: 775 EDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVA 829
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1764 EPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIR 1943
Query: 830 KVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 889
+R+A K
Sbjct: 1944 DIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAK 2123
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--L 947
E + +L E KW GNDII AK+M ++M EM+ RG K +
Sbjct: 2124 IAEQV-ASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDV 2300
Query: 948 IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---T 1004
I AK IA+A + +L + +A C D + +LL +RI QL I S VKA
Sbjct: 2301 ISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQN 2480
Query: 1005 MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRW 1058
+ G +S +S + L+ A+NLM +V +TV+ + AS K + G + W
Sbjct: 2481 LGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSW 2651
Query: 1059 VRKTP 1063
K P
Sbjct: 2652 KMKAP 2666
Score = 75.5 bits (184), Expect = 3e-11
Identities = 84/374 (22%), Positives = 162/374 (42%), Gaps = 5/374 (1%)
Frame = +3
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 138 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 317
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 318 --ESQFLKEELVAAVEDVRKQGDLMKAAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 491
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 492 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELK 671
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
HR + + +++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 672 DVGHRDQMAAARGILQKNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 836
Query: 244 IIRVLQLTSWDE-DAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQI 302
I Q T+ D+ + AL + D ++ + P + E+ + I
Sbjct: 837 ISNAAQATASDDASQHQGGGGGELAYALNNFDKQIIVDPLSFSEERFRP--SLEERLESI 1010
Query: 303 LDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
+ A + + C +RRE I+ C + Q + DL + G + +++ ++ +
Sbjct: 1011ISGAALMADSSCTRDDRRERIVAECNAVRQ---ALQDLLSEYMG-NAGRKERSDALNSAI 1178
Query: 361 DVLTAKVENAARKL 374
D +T K + R+L
Sbjct: 1179DKMTKKTRDLRRQL 1220
>dbj|D90362.1|MUSCAP102 Mouse mRNA for cadherin-associated protein (CAP102/alpha catenin)
Length = 3668
Score = 165 bits (417), Expect = 3e-38
Identities = 141/545 (25%), Positives = 224/545 (40%), Gaps = 19/545 (3%)
Frame = +1
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKAQMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ Q+++A+
Sbjct: 1051 RERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1230
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXN 654
VSD F +T P+ +L AA N +EV E A F H+ +L N
Sbjct: 1231 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISN-N 1392
Query: 655 KSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
+ V+ ++ S L PQVI+AA L P ++ A E+ + K QW V +T VD
Sbjct: 1393 EEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVD 1572
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1573 DITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNY 1752
Query: 775 EDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVA 829
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1753 EPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIR 1932
Query: 830 KVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 889
+R+A K
Sbjct: 1933 DIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAK 2112
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--L 947
E + +L E KW GNDII AK+M ++M EM+ RG K +
Sbjct: 2113 IAEQV-ASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDV 2289
Query: 948 IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---T 1004
I AK IA+A + +L + +A C D + +LL +RI QL I S VKA
Sbjct: 2290 ISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQN 2469
Query: 1005 MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRW 1058
+ G +S +S + L+ A+NLM +V +TV+ + AS K + G + W
Sbjct: 2470 LGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSW 2640
Query: 1059 VRKTP 1063
K P
Sbjct: 2641 KMKAP 2655
Score = 75.1 bits (183), Expect = 4e-11
Identities = 84/374 (22%), Positives = 164/374 (43%), Gaps = 5/374 (1%)
Frame = +1
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 127 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 306
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 307 --ESQFLKEELVVAVEDVRKQGDLMKSAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 480
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 481 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELK 660
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
+R + + +++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 661 DVGNRDQMAAARGILQKNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 825
Query: 244 IIRVLQLTSWDEDAWASKDTEA-MKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQI 302
I Q T+ D+ A + + AL + D ++ + P + E+ + I
Sbjct: 826 ISNAAQATASDDAAQHQGGSGGELAYALNNFDKQIIVDPLSFSEERFRP--SLEERLESI 999
Query: 303 LDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
+ A + + C +RRE I+ C + Q + DL + G + +++ ++ +
Sbjct: 1000ISGAALMADSSCTRDDRRERIVAECNAVRQ---ALQDLLSEYMG-NAGRKERSDALNSAI 1167
Query: 361 DVLTAKVENAARKL 374
D +T K + R+L
Sbjct: 1168DKMTKKTRDLRRQL 1209
>dbj|D13866.1|HUMACA Human mRNA for alpha-catenin, complete cds
Length = 3429
Score = 165 bits (417), Expect = 3e-38
Identities = 141/545 (25%), Positives = 224/545 (40%), Gaps = 19/545 (3%)
Frame = +1
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKAQMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ Q+++A+
Sbjct: 1054 RERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1233
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXN 654
VSD F +T P+ +L AA N +EV E A F H+ +L N
Sbjct: 1234 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISN-N 1395
Query: 655 KSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
+ V+ ++ S L PQVI+AA L P ++ A E+ + K QW V +T VD
Sbjct: 1396 EEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVD 1575
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1576 DITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNY 1755
Query: 775 EDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVA 829
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1756 EPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIR 1935
Query: 830 KVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 889
+R+A K
Sbjct: 1936 DIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAK 2115
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--L 947
E + +L E KW GNDII AK+M ++M EM+ RG K +
Sbjct: 2116 IAEQV-ASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDV 2292
Query: 948 IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---T 1004
I AK IA+A + +L + +A C D + +LL +RI QL I S VKA
Sbjct: 2293 ISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQN 2472
Query: 1005 MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRW 1058
+ G +S +S + L+ A+NLM +V +TV+ + AS K + G + W
Sbjct: 2473 LGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSW 2643
Query: 1059 VRKTP 1063
K P
Sbjct: 2644 KMKAP 2658
Score = 75.5 bits (184), Expect = 3e-11
Identities = 84/374 (22%), Positives = 162/374 (42%), Gaps = 5/374 (1%)
Frame = +1
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 130 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 309
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 310 --ESQFLKEELVAAVEDVRKQGDLMKAAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 483
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 484 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELK 663
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
HR + + +++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 664 DVGHRDQMAAARGILQKNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 828
Query: 244 IIRVLQLTSWDE-DAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQI 302
I Q T+ D+ + AL + D ++ + P + E+ + I
Sbjct: 829 ISNAAQATASDDASQHQGGGGGELAYALNNFDKQIIVDPLSFSEERFRP--SLEERLESI 1002
Query: 303 LDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
+ A + + C +RRE I+ C + Q + DL + G + +++ ++ +
Sbjct: 1003ISGAALMADSSCTRDDRRERIVAECNAVRQ---ALQDLLSEYMG-NAGRKERSDALNSAI 1170
Query: 361 DVLTAKVENAARKL 374
D +T K + R+L
Sbjct: 1171DKMTKKTRDLRRQL 1212
>ref|XM_038221.1| Homo sapiens catenin (cadherin-associated protein), alpha 1 (102kD)
(CTNNA1), mRNA
Length = 3466
Score = 165 bits (417), Expect = 3e-38
Identities = 141/545 (25%), Positives = 224/545 (40%), Gaps = 19/545 (3%)
Frame = +1
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKAQMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ Q+++A+
Sbjct: 991 RERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1170
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXN 654
VSD F +T P+ +L AA N +EV E A F H+ +L N
Sbjct: 1171 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISN-N 1332
Query: 655 KSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
+ V+ ++ S L PQVI+AA L P ++ A E+ + K QW V +T VD
Sbjct: 1333 EEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVD 1512
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1513 DITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNY 1692
Query: 775 EDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVA 829
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1693 EPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIR 1872
Query: 830 KVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 889
+R+A K
Sbjct: 1873 DIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAK 2052
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--L 947
E + +L E KW GNDII AK+M ++M EM+ RG K +
Sbjct: 2053 IAEQV-ASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDV 2229
Query: 948 IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---T 1004
I AK IA+A + +L + +A C D + +LL +RI QL I S VKA
Sbjct: 2230 ISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQN 2409
Query: 1005 MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRW 1058
+ G +S +S + L+ A+NLM +V +TV+ + AS K + G + W
Sbjct: 2410 LGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSW 2580
Query: 1059 VRKTP 1063
K P
Sbjct: 2581 KMKAP 2595
Score = 75.5 bits (184), Expect = 3e-11
Identities = 84/374 (22%), Positives = 162/374 (42%), Gaps = 5/374 (1%)
Frame = +1
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 67 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 246
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 247 --ESQFLKEELVAAVEDVRKQGDLMKAAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 420
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 421 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELK 600
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
HR + + +++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 601 DVGHRDQMAAARGILQKNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 765
Query: 244 IIRVLQLTSWDE-DAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQI 302
I Q T+ D+ + AL + D ++ + P + E+ + I
Sbjct: 766 ISNAAQATASDDASQHQGGGGGELAYALNNFDKQIIVDPLSFSEERFRP--SLEERLESI 939
Query: 303 LDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
+ A + + C +RRE I+ C + Q + DL + G + +++ ++ +
Sbjct: 940 ISGAALMADSSCTRDDRRERIVAECNAVRQ---ALQDLLSEYMG-NAGRKERSDALNSAI 1107
Query: 361 DVLTAKVENAARKL 374
D +T K + R+L
Sbjct: 1108DKMTKKTRDLRRQL 1149
>ref|NM_009818.1| Mus musculus catenin alpha 1 (Catna1), mRNA
Length = 3713
Score = 165 bits (417), Expect = 3e-38
Identities = 141/545 (25%), Positives = 224/545 (40%), Gaps = 19/545 (3%)
Frame = +1
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKAQMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ Q+++A+
Sbjct: 1060 RERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1239
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXN 654
VSD F +T P+ +L AA N +EV E A F H+ +L N
Sbjct: 1240 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISN-N 1401
Query: 655 KSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
+ V+ ++ S L PQVI+AA L P ++ A E+ + K QW V +T VD
Sbjct: 1402 EEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVD 1581
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1582 DITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNY 1761
Query: 775 EDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVA 829
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1762 EPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIR 1941
Query: 830 KVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 889
+R+A K
Sbjct: 1942 DIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAK 2121
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--L 947
E + +L E KW GNDII AK+M ++M EM+ RG K +
Sbjct: 2122 IAEQV-ASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDV 2298
Query: 948 IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---T 1004
I AK IA+A + +L + +A C D + +LL +RI QL I S VKA
Sbjct: 2299 ISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQN 2478
Query: 1005 MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRW 1058
+ G +S +S + L+ A+NLM +V +TV+ + AS K + G + W
Sbjct: 2479 LGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSW 2649
Query: 1059 VRKTP 1063
K P
Sbjct: 2650 KMKAP 2664
Score = 75.1 bits (183), Expect = 4e-11
Identities = 84/374 (22%), Positives = 164/374 (43%), Gaps = 5/374 (1%)
Frame = +1
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 136 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 315
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 316 --ESQFLKEELVVAVEDVRKQGDLMKSAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 489
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 490 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELK 669
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
+R + + +++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 670 DVGNRDQMAAARGILQKNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 834
Query: 244 IIRVLQLTSWDEDAWASKDTEA-MKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQI 302
I Q T+ D+ A + + AL + D ++ + P + E+ + I
Sbjct: 835 ISNAAQATASDDAAQHQGGSGGELAYALNNFDKQIIVDPLSFSEERFRP--SLEERLESI 1008
Query: 303 LDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
+ A + + C +RRE I+ C + Q + DL + G + +++ ++ +
Sbjct: 1009ISGAALMADSSCTRDDRRERIVAECNAVRQ---ALQDLLSEYMG-NAGRKERSDALNSAI 1176
Query: 361 DVLTAKVENAARKL 374
D +T K + R+L
Sbjct: 1177DKMTKKTRDLRRQL 1218
>emb|X59990.1|MMALPA M.musculus alpha-catenin gene for alpha-catenin
Length = 3713
Score = 165 bits (417), Expect = 3e-38
Identities = 141/545 (25%), Positives = 224/545 (40%), Gaps = 19/545 (3%)
Frame = +1
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKAQMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ Q+++A+
Sbjct: 1060 RERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1239
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXN 654
VSD F +T P+ +L AA N +EV E A F H+ +L N
Sbjct: 1240 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISN-N 1401
Query: 655 KSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
+ V+ ++ S L PQVI+AA L P ++ A E+ + K QW V +T VD
Sbjct: 1402 EEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVD 1581
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1582 DITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNY 1761
Query: 775 EDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVA 829
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1762 EPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIR 1941
Query: 830 KVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 889
+R+A K
Sbjct: 1942 DIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAK 2121
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--L 947
E + +L E KW GNDII AK+M ++M EM+ RG K +
Sbjct: 2122 IAEQV-ASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDV 2298
Query: 948 IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---T 1004
I AK IA+A + +L + +A C D + +LL +RI QL I S VKA
Sbjct: 2299 ISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQN 2478
Query: 1005 MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRW 1058
+ G +S +S + L+ A+NLM +V +TV+ + AS K + G + W
Sbjct: 2479 LGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSW 2649
Query: 1059 VRKTP 1063
K P
Sbjct: 2650 KMKAP 2664
Score = 75.1 bits (183), Expect = 4e-11
Identities = 84/374 (22%), Positives = 164/374 (43%), Gaps = 5/374 (1%)
Frame = +1
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 136 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 315
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 316 --ESQFLKEELVVAVEDVRKQGDLMKSAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 489
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 490 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELK 669
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
+R + + +++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 670 DVGNRDQMAAARGILQKNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 834
Query: 244 IIRVLQLTSWDEDAWASKDTEA-MKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQI 302
I Q T+ D+ A + + AL + D ++ + P + E+ + I
Sbjct: 835 ISNAAQATASDDAAQHQGGSGGELAYALNNFDKQIIVDPLSFSEERFRP--SLEERLESI 1008
Query: 303 LDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
+ A + + C +RRE I+ C + Q + DL + G + +++ ++ +
Sbjct: 1009ISGAALMADSSCTRDDRRERIVAECNAVRQ---ALQDLLSEYMG-NAGRKERSDALNSAI 1176
Query: 361 DVLTAKVENAARKL 374
D +T K + R+L
Sbjct: 1177DKMTKKTRDLRRQL 1218
>dbj|AK004623.1|AK004623 Mus musculus adult male lung cDNA, RIKEN full-length enriched
library, clone:1200007A02:catenin alpha 1, full insert
sequence
Length = 3632
Score = 165 bits (417), Expect = 3e-38
Identities = 141/545 (25%), Positives = 224/545 (40%), Gaps = 19/545 (3%)
Frame = +1
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKAQMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ Q+++A+
Sbjct: 1018 RERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1197
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXN 654
VSD F +T P+ +L AA N +EV E A F H+ +L N
Sbjct: 1198 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISN-N 1359
Query: 655 KSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
+ V+ ++ S L PQVI+AA L P ++ A E+ + K QW V +T VD
Sbjct: 1360 EEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVD 1539
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1540 DITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNY 1719
Query: 775 EDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVA 829
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1720 EPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIR 1899
Query: 830 KVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 889
+R+A K
Sbjct: 1900 DIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAK 2079
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--L 947
E + +L E KW GNDII AK+M ++M EM+ RG K +
Sbjct: 2080 IAEQV-ASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDV 2256
Query: 948 IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---T 1004
I AK IA+A + +L + +A C D + +LL +RI QL I S VKA
Sbjct: 2257 ISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQN 2436
Query: 1005 MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRW 1058
+ G +S +S + L+ A+NLM +V +TV+ + AS K + G + W
Sbjct: 2437 LGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSW 2607
Query: 1059 VRKTP 1063
K P
Sbjct: 2608 KMKAP 2622
Score = 75.1 bits (183), Expect = 4e-11
Identities = 84/374 (22%), Positives = 164/374 (43%), Gaps = 5/374 (1%)
Frame = +1
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 94 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 273
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 274 --ESQFLKEELVVAVEDVRKQGDLMKSAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 447
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 448 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELK 627
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
+R + + +++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 628 DVGNRDQMAAARGILQKNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 792
Query: 244 IIRVLQLTSWDEDAWASKDTEA-MKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQI 302
I Q T+ D+ A + + AL + D ++ + P + E+ + I
Sbjct: 793 ISNAAQATASDDAAQHQGGSGGELAYALNNFDKQIIVDPLSFSEERFRP--SLEERLESI 966
Query: 303 LDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
+ A + + C +RRE I+ C + Q + DL + G + +++ ++ +
Sbjct: 967 ISGAALMADSSCTRDDRRERIVAECNAVRQ---ALQDLLSEYMG-NAGRKERSDALNSAI 1134
Query: 361 DVLTAKVENAARKL 374
D +T K + R+L
Sbjct: 1135DKMTKKTRDLRRQL 1176
>dbj|D14705.1|HUMALPHAC Human mRNA for alpha-catenin, complete cds
Length = 3433
Score = 163 bits (412), Expect = 1e-37
Identities = 140/545 (25%), Positives = 223/545 (40%), Gaps = 19/545 (3%)
Frame = +2
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKAQMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ Q+++A+
Sbjct: 1079 RERIVAECNAVRKALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1258
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXN 654
VSD F +T P+ +L AA N +EV E A F H+ +L N
Sbjct: 1259 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISN-N 1420
Query: 655 KSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
+ V+ ++ S L PQVI+AA L P ++ A E+ + K QW V +T VD
Sbjct: 1421 EEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVD 1600
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1601 DITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNY 1780
Query: 775 EDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVA 829
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1781 EPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIR 1960
Query: 830 KVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 889
+R+A K
Sbjct: 1961 DIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAK 2140
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--L 947
E + +L E KW GNDII AK+M ++M EM+ RG K +
Sbjct: 2141 IAEQV-ASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDV 2317
Query: 948 IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---T 1004
I AK IA+A + +L + +A C D + +LL +RI L I S VKA
Sbjct: 2318 ISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHHLNICSKVKAEVQN 2497
Query: 1005 MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRW 1058
+ G +S +S + L+ A+NLM +V +TV+ + AS K + G + W
Sbjct: 2498 LGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSW 2668
Query: 1059 VRKTP 1063
K P
Sbjct: 2669 KMKAP 2683
Score = 73.9 bits (180), Expect = 8e-11
Identities = 83/374 (22%), Positives = 162/374 (43%), Gaps = 5/374 (1%)
Frame = +2
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 155 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 334
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 335 --ESQFLKEELVAAVEDVRKQGDLMKAAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 508
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 509 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELK 688
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
HR + + +++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 689 DVGHRDQMAAARGILQKNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 853
Query: 244 IIRVLQLTSWDE-DAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQI 302
I Q T+ D+ + AL + D ++ + P + E+ + I
Sbjct: 854 ISNAAQATASDDASQHQGGGGGELAYALNNFDKQIIVDPLSFSEERFRP--SLEERLESI 1027
Query: 303 LDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
+ A + + C +RRE I+ C + + + DL + G + +++ ++ +
Sbjct: 1028ISGAALMADSSCTRDDRRERIVAECNAVRK---ALQDLLSEYMG-NAGRKERSDALNSAI 1195
Query: 361 DVLTAKVENAARKL 374
D +T K + R+L
Sbjct: 1196DKMTKKTRDLRRQL 1237
>gb|U47624.1|XLU47624 Xenopus laevis alpha(E)-catenin mRNA, complete cds
Length = 3853
Score = 162 bits (411), Expect = 1e-37
Identities = 158/632 (25%), Positives = 253/632 (40%), Gaps = 32/632 (5%)
Frame = +3
Query: 464 KQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPT-VDDRGVGQAAIRGL 522
KQ+ A+ + +N A A S A G++ A D VD G + R
Sbjct: 828 KQLQQAVSGI---SNAAQATSSEESAQQQGGGELAVALNNFDKQIIVDPLGFSEERFRPS 998
Query: 523 VAEGHRLANVMMGPY------------RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQAR 570
+ E RL +++ G R+ ++A+C+ V G +
Sbjct: 999 LEE--RLESIISGAALMADSSCTRDDRRERIVAECNSVRQALQDLLSEYMGNTGRKERGD 1172
Query: 571 ALASQLQD---SLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFD 627
AL S + +DL+ Q+++A+ VSD F +T P+ +L AA N +EV
Sbjct: 1173 ALNSAIDKMTRKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNG----NEKEV-K 1337
Query: 628 ERAANFENHSGRLXXXXXXXXXXXXXNKSTVEGIQASVKTARELTPQVISAARILLRNPG 687
E A F H+ +L N+ V+ ++ S L PQVI+AA L P
Sbjct: 1338 EYAQVFREHANKLIEVANLACSISN-NEEGVKLVRISAGQLESLCPQVINAALALAAKPN 1514
Query: 688 NQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQ 747
++ A E+ + K QW V +T VD+ L SE I +D++KC +A+
Sbjct: 1515 SKMAQENMDLYKEQWERQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQERDVD 1694
Query: 748 MLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMD-----AK 802
L A +I RA R++ V E++N E + E V A+ L+ T+ P + +
Sbjct: 1695 GLDRTAGAIRGRAARVIHVVTSEMDNYEPGIYTEKVLEATKLLTNTVMPRFTEQVEAAVE 1874
Query: 803 AVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXX 862
A++G+ + + F+D+ + V +R+A
Sbjct: 1875 ALSGDTNQTMDENEFIDASRLVYDGVRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSV 2054
Query: 863 XXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMMAARQLHDEARKWSSKGNDIIAA 922
K E + +L E KW GND+I
Sbjct: 2055 QTEDDQLIAGQSARAIMAQLPQEQKAKIAEQV-ASFQEEKSKLDAEVSKWDDNGNDLIVL 2231
Query: 923 AKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTN 980
AK+M ++M EM+ RG K +I AK IA+A + +L + +A C D + +
Sbjct: 2232 AKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSTCKQD 2411
Query: 981 LLQVCERIPTISTQLKILSTVKA---TMLGRTNISDEESEQATEMLVHNAQNLMQSVKET 1037
LL +RI QL I S VKA + G +S +S + L+ A+NLM +V +T
Sbjct: 2412 LLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMS---LIQAAKNLMNAVVQT 2582
Query: 1038 VREAEAASIKIRTDAGF------TLRWVRKTP 1063
V+ + AS K + G + W K P
Sbjct: 2583 VKASYVASTKYQKSQGMASLNLPAVSWKMKAP 2678
Score = 78.6 bits (192), Expect = 3e-12
Identities = 85/373 (22%), Positives = 164/373 (43%), Gaps = 4/373 (1%)
Frame = +3
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV +G + K A V A+V+ A N + G + +
Sbjct: 156 TLAVERLLEPLVSQVTTLVNTSNKGPSNKKKGRSKKAHVLAASVEQATQNFLDKGDKIAK 335
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
+ Q LK ++ A V ++ A+ DP S R ++ +R +LS + LL
Sbjct: 336 --DSQFLKEELIAAVEDVRKQGEQMRSASGEFADDPCSSVKRGNMVRAARALLSAVTRLL 509
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V +++ K + E + T +DL K L + K+ M +RQQEL
Sbjct: 510 ILADMADVYRLLVQLKVVEEGILKLRNAGTEQDLGIQYKALRAEVDKLNVMTAKRQQELK 689
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
HR + + +++ +P+L +A + + ++ + NR+ +++ ++
Sbjct: 690 DIGHRDQMAAARGILQKSIPILYTASQACL-----QHPDVAAYKANRDLVYKQLQQAVSG 854
Query: 244 IIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQIL 303
I Q TS +E A E + AL + D ++ + P + E+ + I+
Sbjct: 855 ISNAAQATSSEESAQQQGGGE-LAVALNNFDKQIIVDPLGFSEERFRP--SLEERLESII 1025
Query: 304 DEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLD 361
A + + C +RRE I+ C + Q + DL + G + ++ ++ +D
Sbjct: 1026SGAALMADSSCTRDDRRERIVAECNSVRQ---ALQDLLSEYMG-NTGRKERGDALNSAID 1193
Query: 362 VLTAKVENAARKL 374
+T K + R+L
Sbjct: 1194KMTRKTRDLRRQL 1232
>gb|AF099737.1|AF099737 Danio rerio cell-adhesion protein alphaE catenin mRNA, complete cds
Length = 3777
Score = 161 bits (408), Expect = 3e-37
Identities = 139/545 (25%), Positives = 223/545 (40%), Gaps = 19/545 (3%)
Frame = +3
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKAQMQEAMTQE 594
R+ ++A+C+ V G ++ AL + + K DL+ Q+++A+
Sbjct: 1272 RERIVAECNSVRQALQDLLSEYMGNAGRKEKSDALNTAIDRMTKKTRDLRRQLRKAVMDH 1451
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXN 654
VSD F +T P+ +L AA N +EV E A F H+ +L N
Sbjct: 1452 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISN-N 1613
Query: 655 KSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
+ V+ ++ + L PQVI+AA L P ++ A ++ + K+QW V +T VD
Sbjct: 1614 EEGVKLVRMAASQLETLCPQVINAALALAAKPNSKVAQDNMDLFKDQWEKQVRVLTDAVD 1793
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1794 DITSIDDFLCVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVVHVVTSEMDNY 1973
Query: 775 EDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAVA 829
+ E V A+ L++T+ P + +A++ N P + F+D+ + V
Sbjct: 1974 MPGVYTEKVLEATKLLTETVMPRFTEQVEAAVEALSANNGQPVDENEFIDASRLVYDGVR 2153
Query: 830 KVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK 889
+R+A K
Sbjct: 2154 DIRKAVLMIRTPEELDDSDFETEDFDSRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAK 2333
Query: 890 AGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--L 947
E + +L E KW GNDII AK+M ++M EM+ RG K +
Sbjct: 2334 IAEQV-ASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDV 2510
Query: 948 IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---T 1004
I AK IA+A + +L + +A QC D + +LL +RI QL I S VKA
Sbjct: 2511 ISAAKKIAEAGSRMDKLGRAIADQCPDSACKQDLLAYLQRIALFCHQLNICSKVKAEVQN 2690
Query: 1005 MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGF------TLRW 1058
+ G +S +S + L+ A+NLM SV TV+ + AS K + + W
Sbjct: 2691 LGGELVVSGLDSAMS---LIQAAKNLMNSVVSTVKASYVASTKYQKSQDMQSLNMPAISW 2861
Query: 1059 VRKTP 1063
K P
Sbjct: 2862 KMKAP 2876
>ref|NM_004389.1| Homo sapiens catenin (cadherin-associated protein), alpha 2 (CTNNA2),
mRNA
Length = 3709
Score = 160 bits (406), Expect = 5e-37
Identities = 163/644 (25%), Positives = 264/644 (40%), Gaps = 44/644 (6%)
Frame = +1
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAA-----LTSKLGDLRRQGKGDSPE 458
G++ ++ AR+ EL DP RD++ + G + T+ LR +
Sbjct: 568 GKKMVKLNYVAARRQQEL-KDPHCRDEMAAARGALKKNATMLYTASQAFLRHPDVAATRA 744
Query: 459 ARALA-KQVATALQNLQTKTNRAVANSRPAKAAVHLE-GKIEQAQRWIDNPTV-DDRGVG 515
R KQV A+ + +N A A S +A H G++ A DN + D
Sbjct: 745 NRDYVFKQVQEAIAGI---SNAAQATSPTDEAKGHTGIGELAAALNEFDNKIILDPMTFS 915
Query: 516 QAAIRGLVAEGHRLANVMMGPY------------RQDLLAKCDRVXXXXXXXXXXXXRGE 563
+A R + E RL +++ G R+ ++A+C+ V
Sbjct: 916 EARFRPSLEE--RLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMNNT 1089
Query: 564 GESPQARAL---ASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAP 620
G + L ++ +DL+ Q+++A+ +SD F +T P+ +L AA +
Sbjct: 1090 GRKEKGDPLNIAIDKMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSG---- 1257
Query: 621 NREEVFDERAANFENHSGRLXXXXXXXXXXXXXNKSTVEGIQASVKTARELTPQVISAAR 680
N +EV E A F H+ +L N+ V+ ++ + L PQVI+AA
Sbjct: 1258 NEKEV-KEYAQVFREHANKLVEVANLACSISN-NEEGVKLVRMAATQIDSLCPQVINAAL 1431
Query: 681 ILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVA 740
L P ++ A ++ + K+QW V +T VD+ L SE I +D++KC +A
Sbjct: 1432 TLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCVIA 1611
Query: 741 MANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMD 800
+ L A +I RA R++ + E+EN E + E V A+ LS+T+ P +
Sbjct: 1612 LQEGDVDTLDRTAGAIRGRAARVIHIINAEMENYEAGVYTEKVLEATKLLSETVMPRFAE 1791
Query: 801 -----AKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLT 855
+A++ N+ P + F+D+ + V +R+A R
Sbjct: 1792 QVEVAIEALSANVPQPFEENEFIDASRLVYDGVRDIRKA--------------VLMIRTP 1929
Query: 856 DELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQ-PMMMAAR----------- 903
+EL Q A ++ Q P A+
Sbjct: 1930 EELEDDSDFEQEDYDVRRGTSVQTEDDQLIAGQSARAIMAQLPQEEKAKIAEQVEIFHQE 2109
Query: 904 --QLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASD 959
+L E KW GNDII AK+M ++M EM+ RG K +I AK IA+A
Sbjct: 2110 KSKLDAEVAKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEAGS 2289
Query: 960 EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA 1003
+ +LA+ VA QC D + +LL +RI QL I S VKA
Sbjct: 2290 RMDKLARAVADQCPDSACKQDLLAYLQRIALYCHQLNICSKVKA 2421
Score = 86.3 bits (212), Expect = 2e-14
Identities = 85/373 (22%), Positives = 157/373 (41%), Gaps = 4/373 (1%)
Frame = +1
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T T+E +LEP+ Q++ LV +G K A V A+V+ A N + G++ +
Sbjct: 91 TLTVERLLEPLVTQVTTLVNTSNKGPSGKKKGRSKKAHVLAASVEQATQNFLEKGEQIAK 270
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
++D LK ++ A V + A+ DP S R ++ +R +LS + LL
Sbjct: 271 ESQD--LKEELVAAVEDVRKQGETMRIASSEFADDPCSSVKRGTMVRAARALLSAVTRLL 444
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V +++ K + E L + +DL K G M K+ + RQQEL
Sbjct: 445 ILADMADVMRLLSHLKIVEEALEAVKNATNEQDLANRFKEFGKKMVKLNYVAARRQQELK 624
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
R + + +K+ +L +A + F+ ++ + NR++ +++ I
Sbjct: 625 DPHCRDEMAAARGALKKNATMLYTASQAFL-----RHPDVAATRANRDYVFKQVQEAIAG 789
Query: 244 IIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQIL 303
I Q TS ++A + AL D+K+ + P + E+ + I+
Sbjct: 790 ISNAAQATSPTDEAKGHTGIGELAAALNEFDNKIILDPMTFSEARFRP--SLEERLESII 963
Query: 304 DEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLD 361
A + + C +RRE I+ C + Q + G +K ++ +D
Sbjct: 964 SGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMNNTGRK----EKGDPLNIAID 1131
Query: 362 VLTAKVENAARKL 374
+T K + R+L
Sbjct: 1132KMTKKTRDLRRQL 1170
>gb|M94151.2|HUMCAPR Homo sapiens cadherin-associated protein-related (CTNNA2) mRNA,
complete cds
Length = 3709
Score = 160 bits (406), Expect = 5e-37
Identities = 163/644 (25%), Positives = 264/644 (40%), Gaps = 44/644 (6%)
Frame = +1
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAA-----LTSKLGDLRRQGKGDSPE 458
G++ ++ AR+ EL DP RD++ + G + T+ LR +
Sbjct: 568 GKKMVKLNYVAARRQQEL-KDPHCRDEMAAARGALKKNATMLYTASQAFLRHPDVAATRA 744
Query: 459 ARALA-KQVATALQNLQTKTNRAVANSRPAKAAVHLE-GKIEQAQRWIDNPTV-DDRGVG 515
R KQV A+ + +N A A S +A H G++ A DN + D
Sbjct: 745 NRDYVFKQVQEAIAGI---SNAAQATSPTDEAKGHTGIGELAAALNEFDNKIILDPMTFS 915
Query: 516 QAAIRGLVAEGHRLANVMMGPY------------RQDLLAKCDRVXXXXXXXXXXXXRGE 563
+A R + E RL +++ G R+ ++A+C+ V
Sbjct: 916 EARFRPSLEE--RLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMNNT 1089
Query: 564 GESPQARAL---ASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAP 620
G + L ++ +DL+ Q+++A+ +SD F +T P+ +L AA +
Sbjct: 1090 GRKEKGDPLNIAIDKMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSG---- 1257
Query: 621 NREEVFDERAANFENHSGRLXXXXXXXXXXXXXNKSTVEGIQASVKTARELTPQVISAAR 680
N +EV E A F H+ +L N+ V+ ++ + L PQVI+AA
Sbjct: 1258 NEKEV-KEYAQVFREHANKLVEVANLACSISN-NEEGVKLVRMAATQIDSLCPQVINAAL 1431
Query: 681 ILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVA 740
L P ++ A ++ + K+QW V +T VD+ L SE I +D++KC +A
Sbjct: 1432 TLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCVIA 1611
Query: 741 MANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMD 800
+ L A +I RA R++ + E+EN E + E V A+ LS+T+ P +
Sbjct: 1612 LQEGDVDTLDRTAGAIRGRAARVIHIINAEMENYEAGVYTEKVLEATKLLSETVMPRFAE 1791
Query: 801 -----AKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLT 855
+A++ N+ P + F+D+ + V +R+A R
Sbjct: 1792 QVEVAIEALSANVPQPFEENEFIDASRLVYDGVRDIRKA--------------VLMIRTP 1929
Query: 856 DELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQ-PMMMAAR----------- 903
+EL Q A ++ Q P A+
Sbjct: 1930 EELEDDSDFEQEDYDVRRGTSVQTEDDQLIAGQSARAIMAQLPQEEKAKIAEQVEIFHQE 2109
Query: 904 --QLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASD 959
+L E KW GNDII AK+M ++M EM+ RG K +I AK IA+A
Sbjct: 2110 KSKLDAEVAKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEAGS 2289
Query: 960 EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA 1003
+ +LA+ VA QC D + +LL +RI QL I S VKA
Sbjct: 2290 RMDKLARAVADQCPDSACKQDLLAYLQRIALYCHQLNICSKVKA 2421
Score = 86.3 bits (212), Expect = 2e-14
Identities = 85/373 (22%), Positives = 157/373 (41%), Gaps = 4/373 (1%)
Frame = +1
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T T+E +LEP+ Q++ LV +G K A V A+V+ A N + G++ +
Sbjct: 91 TLTVERLLEPLVTQVTTLVNTSNKGPSGKKKGRSKKAHVLAASVEQATQNFLEKGEQIAK 270
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
++D LK ++ A V + A+ DP S R ++ +R +LS + LL
Sbjct: 271 ESQD--LKEELVAAVEDVRKQGETMRIASSEFADDPCSSVKRGTMVRAARALLSAVTRLL 444
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V +++ K + E L + +DL K G M K+ + RQQEL
Sbjct: 445 ILADMADVMRLLSHLKIVEEALEAVKNATNEQDLANRFKEFGKKMVKLNYVAARRQQELK 624
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
R + + +K+ +L +A + F+ ++ + NR++ +++ I
Sbjct: 625 DPHCRDEMAAARGALKKNATMLYTASQAFL-----RHPDVAATRANRDYVFKQVQEAIAG 789
Query: 244 IIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQIL 303
I Q TS ++A + AL D+K+ + P + E+ + I+
Sbjct: 790 ISNAAQATSPTDEAKGHTGIGELAAALNEFDNKIILDPMTFSEARFRP--SLEERLESII 963
Query: 304 DEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLD 361
A + + C +RRE I+ C + Q + G +K ++ +D
Sbjct: 964 SGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMNNTGRK----EKGDPLNIAID 1131
Query: 362 VLTAKVENAARKL 374
+T K + R+L
Sbjct: 1132KMTKKTRDLRRQL 1170
>ref|NM_009819.1| Mus musculus catenin alpha 2 (Catna2), mRNA
Length = 3955
Score = 160 bits (404), Expect = 9e-37
Identities = 163/644 (25%), Positives = 264/644 (40%), Gaps = 44/644 (6%)
Frame = +3
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAA-----LTSKLGDLRRQGKGDSPE 458
G+E ++ AR+ EL DP RD++ + G + T+ LR +
Sbjct: 720 GKEMVKLNYVAARRQQEL-KDPHCRDEMAAARGALKKNATMLYTASQAFLRHPDVAATRA 896
Query: 459 ARALA-KQVATALQNLQTKTNRAVANSRPAKAAVHLE-GKIEQAQRWIDNPTV-DDRGVG 515
R KQV A+ + ++ A A S +A H G++ A DN + D
Sbjct: 897 NRDYVFKQVQEAIAGI---SSAAQATSPTDEAKGHTGIGELAAALNEFDNKIILDPMTFS 1067
Query: 516 QAAIRGLVAEGHRLANVMMGPY------------RQDLLAKCDRVXXXXXXXXXXXXRGE 563
+A R + E RL +++ G R+ ++A+C+ V
Sbjct: 1068 EARFRPSLEE--RLESIISGAALMADSSCTRDDRRERMVAECNAVRQALQDLLSEDMNNT 1241
Query: 564 GESPQARAL---ASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAP 620
G + L ++ +DL+ Q+++A+ +SD F +T P+ +L AA +
Sbjct: 1242 GRKEKGDPLNIAIDKMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSG---- 1409
Query: 621 NREEVFDERAANFENHSGRLXXXXXXXXXXXXXNKSTVEGIQASVKTARELTPQVISAAR 680
N +EV E A F H+ +L N+ V+ ++ + L PQVI+AA
Sbjct: 1410 NEKEV-KEYAQVFREHANKLVEVANLACSISN-NEEGVKLVRMAATQIDSLCPQVINAAL 1583
Query: 681 ILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVA 740
L P ++ A ++ + K+QW V +T VD+ L SE I +D++KC +A
Sbjct: 1584 TLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCVIA 1763
Query: 741 MANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMD 800
+ L A +I RA R++ + E+EN E + E V A+ LS+T+ P +
Sbjct: 1764 LQEGDVDTLDRTAGAIRGRAARVIHIINAEMENYEAGVYTEKVLEATKLLSETVMPRFAE 1943
Query: 801 -----AKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLT 855
+A++ N+ P + F+D+ + V +R+A R
Sbjct: 1944 QVEVAIEALSANVPQPFEENEFIDASRLVYYGVRDIRKA--------------VLMIRTP 2081
Query: 856 DELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQ-PMMMAAR----------- 903
+EL Q A ++ Q P A+
Sbjct: 2082 EELEDDSDFEQEDYDVRSRTSVQTEDRQLIAGQSARAIMAQLPQEEKAKIAEQVEIFHQE 2261
Query: 904 --QLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASD 959
+L E KW GNDII AK+M ++M EM+ RG K +I AK IA+A
Sbjct: 2262 KSKLDAEVAKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEAGS 2441
Query: 960 EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA 1003
+ +LA+ VA QC D + +LL +RI QL I S VKA
Sbjct: 2442 RMDKLARAVADQCPDSACKQDLLAYLQRIALYCHQLNICSKVKA 2573
Score = 83.2 bits (204), Expect = 1e-13
Identities = 84/373 (22%), Positives = 156/373 (41%), Gaps = 4/373 (1%)
Frame = +3
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T T+E +LEP+ Q++ LV +G K A V A+V+ A N + G++ +
Sbjct: 243 TLTVERLLEPLVTQVTTLVNTSNKGPSGKKKGRSKKAHVLAASVEQATQNFLEKGEQIAK 422
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
++D LK ++ A V A+ DP S R ++ +R +LS + LL
Sbjct: 423 ESQD--LKEELVAAVEDVRKQGETKRIASSEFADDPCSSVKRGTMVRAARALLSAVTRLL 596
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V +++ K + E L + +DL K G M K+ + RQQEL
Sbjct: 597 ILADMADVMRLLSHLKIVEEALEAVKNATNEQDLANRFKEFGKEMVKLNYVAARRQQELK 776
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
R + + +K+ +L +A + F+ ++ + NR++ +++ I
Sbjct: 777 DPHCRDEMAAARGALKKNATMLYTASQAFL-----RHPDVAATRANRDYVFKQVQEAIAG 941
Query: 244 IIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQIL 303
I Q TS ++A + AL D+K+ + P + E+ + I+
Sbjct: 942 ISSAAQATSPTDEAKGHTGIGELAAALNEFDNKIILDPMTFSEARFRP--SLEERLESII 1115
Query: 304 DEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLD 361
A + + C +RRE ++ C + Q + G +K ++ +D
Sbjct: 1116SGAALMADSSCTRDDRRERMVAECNAVRQALQDLLSEDMNNTGRK----EKGDPLNIAID 1283
Query: 362 VLTAKVENAARKL 374
+T K + R+L
Sbjct: 1284KMTKKTRDLRRQL 1322
>dbj|D25282.1|MUSANCII Mouse mRNA for alpha N-catenin II, complete cds
Length = 3955
Score = 160 bits (404), Expect = 9e-37
Identities = 163/644 (25%), Positives = 264/644 (40%), Gaps = 44/644 (6%)
Frame = +3
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAA-----LTSKLGDLRRQGKGDSPE 458
G+E ++ AR+ EL DP RD++ + G + T+ LR +
Sbjct: 720 GKEMVKLNYVAARRQQEL-KDPHCRDEMAAARGALKKNATMLYTASQAFLRHPDVAATRA 896
Query: 459 ARALA-KQVATALQNLQTKTNRAVANSRPAKAAVHLE-GKIEQAQRWIDNPTV-DDRGVG 515
R KQV A+ + ++ A A S +A H G++ A DN + D
Sbjct: 897 NRDYVFKQVQEAIAGI---SSAAQATSPTDEAKGHTGIGELAAALNEFDNKIILDPMTFS 1067
Query: 516 QAAIRGLVAEGHRLANVMMGPY------------RQDLLAKCDRVXXXXXXXXXXXXRGE 563
+A R + E RL +++ G R+ ++A+C+ V
Sbjct: 1068 EARFRPSLEE--RLESIISGAALMADSSCTRDDRRERMVAECNAVRQALQDLLSEDMNNT 1241
Query: 564 GESPQARAL---ASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAP 620
G + L ++ +DL+ Q+++A+ +SD F +T P+ +L AA +
Sbjct: 1242 GRKEKGDPLNIAIDKMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSG---- 1409
Query: 621 NREEVFDERAANFENHSGRLXXXXXXXXXXXXXNKSTVEGIQASVKTARELTPQVISAAR 680
N +EV E A F H+ +L N+ V+ ++ + L PQVI+AA
Sbjct: 1410 NEKEV-KEYAQVFREHANKLVEVANLACSISN-NEEGVKLVRMAATQIDSLCPQVINAAL 1583
Query: 681 ILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVA 740
L P ++ A ++ + K+QW V +T VD+ L SE I +D++KC +A
Sbjct: 1584 TLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCVIA 1763
Query: 741 MANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMD 800
+ L A +I RA R++ + E+EN E + E V A+ LS+T+ P +
Sbjct: 1764 LQEGDVDTLDRTAGAIRGRAARVIHIINAEMENYEAGVYTEKVLEATKLLSETVMPRFAE 1943
Query: 801 -----AKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLT 855
+A++ N+ P + F+D+ + V +R+A R
Sbjct: 1944 QVEVAIEALSANVPQPFEENEFIDASRLVYYGVRDIRKA--------------VLMIRTP 2081
Query: 856 DELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQ-PMMMAAR----------- 903
+EL Q A ++ Q P A+
Sbjct: 2082 EELEDDSDFEQEDYDVRSRTSVQTEDRQLIAGQSARAIMAQLPQEEKAKIAEQVEIFHQE 2261
Query: 904 --QLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASD 959
+L E KW GNDII AK+M ++M EM+ RG K +I AK IA+A
Sbjct: 2262 KSKLDAEVAKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEAGS 2441
Query: 960 EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA 1003
+ +LA+ VA QC D + +LL +RI QL I S VKA
Sbjct: 2442 RMDKLARAVADQCPDSACKQDLLAYLQRIALYCHQLNICSKVKA 2573
Score = 83.2 bits (204), Expect = 1e-13
Identities = 84/373 (22%), Positives = 156/373 (41%), Gaps = 4/373 (1%)
Frame = +3
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T T+E +LEP+ Q++ LV +G K A V A+V+ A N + G++ +
Sbjct: 243 TLTVERLLEPLVTQVTTLVNTSNKGPSGKKKGRSKKAHVLAASVEQATQNFLEKGEQIAK 422
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
++D LK ++ A V A+ DP S R ++ +R +LS + LL
Sbjct: 423 ESQD--LKEELVAAVEDVRKQGETKRIASSEFADDPCSSVKRGTMVRAARALLSAVTRLL 596
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V +++ K + E L + +DL K G M K+ + RQQEL
Sbjct: 597 ILADMADVMRLLSHLKIVEEALEAVKNATNEQDLANRFKEFGKEMVKLNYVAARRQQELK 776
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
R + + +K+ +L +A + F+ ++ + NR++ +++ I
Sbjct: 777 DPHCRDEMAAARGALKKNATMLYTASQAFL-----RHPDVAATRANRDYVFKQVQEAIAG 941
Query: 244 IIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQIL 303
I Q TS ++A + AL D+K+ + P + E+ + I+
Sbjct: 942 ISSAAQATSPTDEAKGHTGIGELAAALNEFDNKIILDPMTFSEARFRP--SLEERLESII 1115
Query: 304 DEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLD 361
A + + C +RRE ++ C + Q + G +K ++ +D
Sbjct: 1116SGAALMADSSCTRDDRRERMVAECNAVRQALQDLLSEDMNNTGRK----EKGDPLNIAID 1283
Query: 362 VLTAKVENAARKL 374
+T K + R+L
Sbjct: 1284KMTKKTRDLRRQL 1322
>ref|NM_001903.1| Homo sapiens catenin (cadherin-associated protein), alpha 1 (102kD)
(CTNNA1), mRNA
Length = 3454
Score = 154 bits (389), Expect = 5e-35
Identities = 137/533 (25%), Positives = 223/533 (41%), Gaps = 17/533 (3%)
Frame = +2
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKAQMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ Q+++A+
Sbjct: 992 RERIVAECNAVRQACRTCVSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1171
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXN 654
VSD F +T P+ +L AA N +EV E A F H+ +L N
Sbjct: 1172 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISN-N 1333
Query: 655 KSTVEGIQASVKTARELTPQVISAAR-ILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLV 713
+ V+ ++ S PQVI+AA L P ++ A E+ + K QW V +T V
Sbjct: 1334 EEGVKLVRMSASQLEAGCPQVINAATWALAPKPQSKLAQENMDLFKEQWEKQVRVLTDAV 1513
Query: 714 DEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVEN 773
D+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1514 DDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDN 1693
Query: 774 SEDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAV 828
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1694 YEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGI 1873
Query: 829 AKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 888
+R+A T++ Q
Sbjct: 1874 RDIRKAVLMIRTPEELDDSDFE----TEDFDVRSETSVQTEDDQLIAGQSARAIMAQLPQ 2041
Query: 889 KAGEVINQPMMMAARQ---LHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKR 945
+ I + + + L E KW GNDII AK+M ++M EM+ RG K
Sbjct: 2042 EQKAKIREQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKN 2221
Query: 946 A--LIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA 1003
+I AK IA+A + +L + + C D + +LL +RI QL I S VKA
Sbjct: 2222 TSDVISAAKKIAEAGSRMDKLGRTIRDHCPDSACKQDLLAYLQRIALYCHQLNICSKVKA 2401
Query: 1004 ---TMLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAG 1053
+ G +S +S + L+ A+NLM +V +TV+ + AS K + G
Sbjct: 2402 EVQNLGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQG 2551
Score = 73.2 bits (178), Expect = 1e-10
Identities = 82/374 (21%), Positives = 156/374 (40%), Gaps = 5/374 (1%)
Frame = +2
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 68 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 247
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 248 --ESQFLKEELVVAVEDVRKQGDLMKAAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 421
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 422 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGNQYKALKPEVDKLNIMAAKRQQELK 601
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
HR + + ++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 602 DVGHRDQMAAARGILQSNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 766
Query: 244 IIRVLQLTSWDE-DAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQI 302
I Q T+ D+ + AL + D ++ + P + E+ + I
Sbjct: 767 ISNAAQATASDDASQHQGGGGGELAYALNNFDKQIIVDPLSFSEERFRP--SLEERLESI 940
Query: 303 LDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
+ A + + C +RRE I+ C + Q G +++ ++ +
Sbjct: 941 ISGAALMADSSCTRDDRRERIVAECNAVRQACRTCVSEYMGNAGRK----ERSDALNSAI 1108
Query: 361 DVLTAKVENAARKL 374
D +T K + R+L
Sbjct: 1109DKMTKKTRDLRRQL 1150
>gb|L23805.1|HUMCATENIN Human alpha1(E)-catenin mRNA, complete cds
Length = 3454
Score = 154 bits (389), Expect = 5e-35
Identities = 137/533 (25%), Positives = 223/533 (41%), Gaps = 17/533 (3%)
Frame = +2
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKAQMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ Q+++A+
Sbjct: 992 RERIVAECNAVRQACRTCVSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1171
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXN 654
VSD F +T P+ +L AA N +EV E A F H+ +L N
Sbjct: 1172 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISN-N 1333
Query: 655 KSTVEGIQASVKTARELTPQVISAAR-ILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLV 713
+ V+ ++ S PQVI+AA L P ++ A E+ + K QW V +T V
Sbjct: 1334 EEGVKLVRMSASQLEAGCPQVINAATWALAPKPQSKLAQENMDLFKEQWEKQVRVLTDAV 1513
Query: 714 DEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVEN 773
D+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1514 DDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDN 1693
Query: 774 SEDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAV 828
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1694 YEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGI 1873
Query: 829 AKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 888
+R+A T++ Q
Sbjct: 1874 RDIRKAVLMIRTPEELDDSDFE----TEDFDVRSETSVQTEDDQLIAGQSARAIMAQLPQ 2041
Query: 889 KAGEVINQPMMMAARQ---LHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKR 945
+ I + + + L E KW GNDII AK+M ++M EM+ RG K
Sbjct: 2042 EQKAKIREQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKN 2221
Query: 946 A--LIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA 1003
+I AK IA+A + +L + + C D + +LL +RI QL I S VKA
Sbjct: 2222 TSDVISAAKKIAEAGSRMDKLGRTIRDHCPDSACKQDLLAYLQRIALYCHQLNICSKVKA 2401
Query: 1004 ---TMLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAG 1053
+ G +S +S + L+ A+NLM +V +TV+ + AS K + G
Sbjct: 2402 EVQNLGGELVVSGVDSAMS---LIQAAKNLMNAVVQTVKASYVASTKYQKSQG 2551
Score = 73.2 bits (178), Expect = 1e-10
Identities = 82/374 (21%), Positives = 156/374 (40%), Gaps = 5/374 (1%)
Frame = +2
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 68 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 247
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ +R +LS + LL
Sbjct: 248 --ESQFLKEELVVAVEDVRKQGDLMKAAAGEFADDPCSSVKRGNMVRAARALLSAVTRLL 421
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 422 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGNQYKALKPEVDKLNIMAAKRQQELK 601
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
HR + + ++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 602 DVGHRDQMAAARGILQSNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 766
Query: 244 IIRVLQLTSWDE-DAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQI 302
I Q T+ D+ + AL + D ++ + P + E+ + I
Sbjct: 767 ISNAAQATASDDASQHQGGGGGELAYALNNFDKQIIVDPLSFSEERFRP--SLEERLESI 940
Query: 303 LDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
+ A + + C +RRE I+ C + Q G +++ ++ +
Sbjct: 941 ISGAALMADSSCTRDDRRERIVAECNAVRQACRTCVSEYMGNAGRK----ERSDALNSAI 1108
Query: 361 DVLTAKVENAARKL 374
D +T K + R+L
Sbjct: 1109DKMTKKTRDLRRQL 1150
>ref|XM_010873.4| Homo sapiens catenin (cadherin-associated protein), alpha 2 (CTNNA2),
mRNA
Length = 2829
Score = 153 bits (387), Expect = 8e-35
Identities = 122/444 (27%), Positives = 192/444 (42%), Gaps = 21/444 (4%)
Frame = +3
Query: 581 KDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRL 640
+DL+ Q+++A+ +SD F +T P+ +L AA + N +EV E A F H+ +L
Sbjct: 270 RDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSG----NEKEV-KEYAQVFREHANKL 434
Query: 641 XXXXXXXXXXXXXNKSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKN 700
N+ V+ ++ + L PQVI+AA L P ++ A ++ + K+
Sbjct: 435 VEVANLACSISN-NEEGVKLVRMAATQIDSLCPQVINAALTLAARPQSKVAQDNMDVFKD 611
Query: 701 QWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRA 760
QW V +T VD+ L SE I +D++KC +A+ L A +I RA
Sbjct: 612 QWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCVIALQEGDVDTLDRTAGAIRGRA 791
Query: 761 NRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQK 815
R++ + E+EN E + E V A+ LS+T+ P + +A++ N+ P +
Sbjct: 792 ARVIHIINAEMENYEAGVYTEKVLEATKLLSETVMPRFAEQVEVAIEALSANVPQPFEEN 971
Query: 816 SFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXX 875
F+D+ + V +R+A R +EL
Sbjct: 972 EFIDASRLVYDGVRDIRKA--------------VLMIRTPEELEDDSDFEQEDYDVRSRT 1109
Query: 876 XXXXXXXXXXXXQKAGEVINQ-PMMMAAR-------------QLHDEARKWSSKGNDIIA 921
Q A ++ Q P A+ +L E KW GNDII
Sbjct: 1110 SVQTEDDQLIAGQSARAIMAQLPQEEKAKIAEQVEIFHQEKSKLDAEVAKWDDSGNDIIV 1289
Query: 922 AAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRT 979
AK+M ++M EM+ RG K +I AK IA+A + +LA+ VA QC D +
Sbjct: 1290 LAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEAGSRMDKLARAVADQCPDSACKQ 1469
Query: 980 NLLQVCERIPTISTQLKILSTVKA 1003
+LL +RI QL I S VKA
Sbjct: 1470 DLLAYLQRIALYCHQLNICSKVKA 1541
>ref|NM_013266.1| Homo sapiens alpha-catenin-like protein (VR22), mRNA
Length = 3024
Score = 151 bits (381), Expect = 4e-34
Identities = 159/671 (23%), Positives = 263/671 (38%), Gaps = 24/671 (3%)
Frame = +2
Query: 402 PEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARA 461
P ++I GA A KE +L S+ S + L+ E +
Sbjct: 767 PNQRDEIAGARASL----------KENSPLLHSICSACLEHSDVASLKASKDTVCEEIQN 916
Query: 462 LAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWID-NP-TVDDRGVGQAAI 519
++ A Q +Q T + P A L +++ + I NP TV + + +
Sbjct: 917 ALNVISNASQGIQNMT------TPPEPQAATLGSALDELENLIVLNPLTVTEEEIRPSLE 1078
Query: 520 RGLVA--EGHRL---ANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALAS 574
+ L A G L ++ +R+ ++A+C+ + G+ ++ L
Sbjct: 1079 KRLEAIISGAALLADSSCTRDLHRERIIAECNAIRQALQDLLSEYMNNAGKKERSNTLNI 1258
Query: 575 QLQDSLK---DLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAA 631
L + K DL+ Q+++A+ VSD F DTT P+ +L AA RE+ E AA
Sbjct: 1259 ALDNMCKKTRDLRRQLRKAIIDHVSDSFLDTTVPLLVLIEAA-----KNGREKEIKEYAA 1423
Query: 632 NFENHSGRLXXXXXXXXXXXXXNKSTVEGIQASVKTARELTPQVISAARILLRNPGNQAA 691
F H+ RL N+ ++ ++ + L PQ+I+AA L P +QA
Sbjct: 1424 IFHEHTSRL-VEVANLACSMSTNEDGIKIVKIAANHLETLCPQIINAALALAARPKSQAV 1600
Query: 692 YEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVA 751
E K W +++ +T VD+ L SE I +D++KC +A+ + L
Sbjct: 1601 KNTMEMYKRTWENHIHVLTEAVDDITSIDDFLAVSESHILEDVNKCIIALRDQDADNLDR 1780
Query: 752 GATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISP-MVMDAKAVAGNISD 810
A +I RA R+ + E+++ E + E V + L+ T+ P V +S
Sbjct: 1781 AAGAIRGRAARVAHIVTGEMDSYEPGAYTEGVMRNVNFLTSTVIPEFVTQVNVALEALSK 1960
Query: 811 PGL----QKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXX 866
L F+D +I + +R R +EL
Sbjct: 1961 SSLNVLDDNQFVDISKKIYDTIHDIR--------------CSVMMIRTPEELEDVSDLEE 2098
Query: 867 XXXXXXXXXXXXXXXXXXXXXQKAGEVINQPM-------MMAARQLHDEARKWSSKGNDI 919
+ E + + +L E W NDI
Sbjct: 2099 EHEVRSHTSIQTEGKTDRAKMTQLPEAEKEKIAEQVADFKKVKSKLDAEIEIWDDTSNDI 2278
Query: 920 IAAAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASDEVTRLAKEVAKQCTDKRI 977
I AK M ++M EM+ RG K +I AK I+++ + LA+++A QC D
Sbjct: 2279 IVLAKNMCMIMMEMTDFTRGKGPLKHTTDVIYAAKMISESGSRMDVLARQIANQCPDPSC 2458
Query: 978 RTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKET 1037
+ +LL E+I S QLKI S VKA + + + L+ A+NLM +V +T
Sbjct: 2459 KQDLLAYLEQIKFYSHQLKICSQVKAEIQNLGGELIMSALDSVTSLIQAAKNLMNAVVQT 2638
Query: 1038 VREAEAASIKI 1048
V+ + AS KI
Sbjct: 2639 VKMSYIASTKI 2671
Score = 60.5 bits (145), Expect = 9e-07
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 1/203 (0%)
Frame = +2
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKA-IPDLTAPVAAVQAAVSNLVRVGKETVQT 64
T T+E +LEP+ Q++ LV + K + +A+V+ A NL+ G++ Q
Sbjct: 233 TFTVEKLLEPLIIQVTTLVNCPQNPSSRKKGRSKRASVLLASVEEATWNLLDKGEKIAQ- 409
Query: 65 TEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLL 124
E +LK ++ + +V L +A+ DP +P R+ ++ +R +L+ + LL+
Sbjct: 410 -EATVLKDELTASLEEVRKESEALKVSAERFTDDPCFLPKREAVVQAARALLAAVTRLLI 586
Query: 125 TFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTH 184
D +V +++ + V DL + LG + + + +RQQ+L
Sbjct: 587 LADMIDVMCLLQHVSAFQRTFETLKNVANKSDLQKTYQKLGKELENLDYLAFKRQQDLKS 766
Query: 185 QEHRVMLVNSMNTVKELLPVLIS 207
R + + ++KE P+L S
Sbjct: 767 PNQRDEIAGARASLKENSPLLHS 835
>gb|AF091606.1|AF091606 Homo sapiens alpha-catenin-like protein VR22 mRNA, complete cds
Length = 3024
Score = 151 bits (381), Expect = 4e-34
Identities = 159/671 (23%), Positives = 263/671 (38%), Gaps = 24/671 (3%)
Frame = +2
Query: 402 PEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARA 461
P ++I GA A KE +L S+ S + L+ E +
Sbjct: 767 PNQRDEIAGARASL----------KENSPLLHSICSACLEHSDVASLKASKDTVCEEIQN 916
Query: 462 LAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWID-NP-TVDDRGVGQAAI 519
++ A Q +Q T + P A L +++ + I NP TV + + +
Sbjct: 917 ALNVISNASQGIQNMT------TPPEPQAATLGSALDELENLIVLNPLTVTEEEIRPSLE 1078
Query: 520 RGLVA--EGHRL---ANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALAS 574
+ L A G L ++ +R+ ++A+C+ + G+ ++ L
Sbjct: 1079 KRLEAIISGAALLADSSCTRDLHRERIIAECNAIRQALQDLLSEYMNNAGKKERSNTLNI 1258
Query: 575 QLQDSLK---DLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAA 631
L + K DL+ Q+++A+ VSD F DTT P+ +L AA RE+ E AA
Sbjct: 1259 ALDNMCKKTRDLRRQLRKAIIDHVSDSFLDTTVPLLVLIEAA-----KNGREKEIKEYAA 1423
Query: 632 NFENHSGRLXXXXXXXXXXXXXNKSTVEGIQASVKTARELTPQVISAARILLRNPGNQAA 691
F H+ RL N+ ++ ++ + L PQ+I+AA L P +QA
Sbjct: 1424 IFHEHTSRL-VEVANLACSMSTNEDGIKIVKIAANHLETLCPQIINAALALAARPKSQAV 1600
Query: 692 YEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVA 751
E K W +++ +T VD+ L SE I +D++KC +A+ + L
Sbjct: 1601 KNTMEMYKRTWENHIHVLTEAVDDITSIDDFLAVSESHILEDVNKCIIALRDQDADNLDR 1780
Query: 752 GATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISP-MVMDAKAVAGNISD 810
A +I RA R+ + E+++ E + E V + L+ T+ P V +S
Sbjct: 1781 AAGAIRGRAARVAHIVTGEMDSYEPGAYTEGVMRNVNFLTSTVIPEFVTQVNVALEALSK 1960
Query: 811 PGL----QKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXX 866
L F+D +I + +R R +EL
Sbjct: 1961 SSLNVLDDNQFVDISKKIYDTIHDIR--------------CSVMMIRTPEELEDVSDLEE 2098
Query: 867 XXXXXXXXXXXXXXXXXXXXXQKAGEVINQPM-------MMAARQLHDEARKWSSKGNDI 919
+ E + + +L E W NDI
Sbjct: 2099 EHEVRSHTSIQTEGKTDRAKMTQLPEAEKEKIAEQVADFKKVKSKLDAEIEIWDDTSNDI 2278
Query: 920 IAAAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASDEVTRLAKEVAKQCTDKRI 977
I AK M ++M EM+ RG K +I AK I+++ + LA+++A QC D
Sbjct: 2279 IVLAKNMCMIMMEMTDFTRGKGPLKHTTDVIYAAKMISESGSRMDVLARQIANQCPDPSC 2458
Query: 978 RTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKET 1037
+ +LL E+I S QLKI S VKA + + + L+ A+NLM +V +T
Sbjct: 2459 KQDLLAYLEQIKFYSHQLKICSQVKAEIQNLGGELIMSALDSVTSLIQAAKNLMNAVVQT 2638
Query: 1038 VREAEAASIKI 1048
V+ + AS KI
Sbjct: 2639 VKMSYIASTKI 2671
Score = 60.5 bits (145), Expect = 9e-07
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 1/203 (0%)
Frame = +2
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKA-IPDLTAPVAAVQAAVSNLVRVGKETVQT 64
T T+E +LEP+ Q++ LV + K + +A+V+ A NL+ G++ Q
Sbjct: 233 TFTVEKLLEPLIIQVTTLVNCPQNPSSRKKGRSKRASVLLASVEEATWNLLDKGEKIAQ- 409
Query: 65 TEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLL 124
E +LK ++ + +V L +A+ DP +P R+ ++ +R +L+ + LL+
Sbjct: 410 -EATVLKDELTASLEEVRKESEALKVSAERFTDDPCFLPKREAVVQAARALLAAVTRLLI 586
Query: 125 TFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTH 184
D +V +++ + V DL + LG + + + +RQQ+L
Sbjct: 587 LADMIDVMCLLQHVSAFQRTFETLKNVANKSDLQKTYQKLGKELENLDYLAFKRQQDLKS 766
Query: 185 QEHRVMLVNSMNTVKELLPVLIS 207
R + + ++KE P+L S
Sbjct: 767 PNQRDEIAGARASLKENSPLLHS 835
>ref|NM_079495.1| Drosophila melanogaster alpha Catenin (alpha-Cat), mRNA
Length = 2935
Score = 151 bits (381), Expect = 4e-34
Identities = 139/532 (26%), Positives = 225/532 (42%), Gaps = 22/532 (4%)
Frame = +3
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGE---SPQARALASQLQDSLKDLKAQMQEAMTQE 594
R+ ++A+C+ V + SP Q+ +DL+ Q+++A+
Sbjct: 1014 RERIVAECNAVRQALQDLLSEYMSNMSQKDNSPGLSRAIDQMCRKTRDLRRQLRKAVVDH 1193
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXN 654
VSD F +TTTP+ L AA + E+ E++ F H+ +L N
Sbjct: 1194 VSDSFLETTTPLLDLIEAAKS-----GNEKKVREKSEIFTKHAEKL-VEVANLVCSMSNN 1355
Query: 655 KSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
+ V+ ++ + L PQVI+AA IL P ++ A E+ T + W V +T VD
Sbjct: 1356 EDGVKMVRYAAAQIESLCPQVINAASILTVRPNSKVAQENMTTYRQAWEVQVRILTEAVD 1535
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ + L A A +I R++R+ V + E++N
Sbjct: 1536 DITTIDDFLAVSENHILEDVNKCVMALQVGDARDLRATAGAIQGRSSRVCNVVEAEMDNY 1715
Query: 775 E----DPKFREAVKAASDELSKTISPMVMDAKAVAGNISDPGL-QKSFLDSGYRILGAVA 829
E + EAVK D++ V A N S+ + + F+D+ + V
Sbjct: 1716 EPCIYTKRVLEAVKVLRDQVMMKFDQRVGAAVGALSNNSNKDVDENDFIDASRLVYDGVR 1895
Query: 830 KVREAXXXXXXXXXXXXXXXX--XXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 887
++R A LT E
Sbjct: 1896 EIRRAVLMNRSSEDLDTDTEFEPVEDLTLETRSRSSAHTGDQTVDEYPDISGICTAREAM 2075
Query: 888 QKAGE----VINQPMMMAARQ---LHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGG 940
+K E I Q + + R+ E KW GNDII AK M ++M EM+ RG
Sbjct: 2076 RKMTEEDKQKIAQQVELFRREKLTFDSEVAKWDDTGNDIIFLAKHMCMIMMEMTDFTRGR 2255
Query: 941 SGTKRAL--IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKIL 998
K + I AK I++A ++ +L +E+A+QC + + +LL +RI Q++I
Sbjct: 2256 GPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKKDLLAYLQRIALYCHQIQIT 2435
Query: 999 STVKATMLGRTNISDE---ESEQATEMLVHNAQNLMQSVKETVREAEAASIK 1047
S VKA + NIS E + L+ A+NLM +V TV+ + AS K
Sbjct: 2436 SKVKADV---QNISGELIVSGLDSATSLIQAAKNLMNAVVLTVKYSYVASTK 2582
>dbj|D13964.2|DROALPC Drosophila melanogaster mRNA for alpha-catenin, complete cds
Length = 2935
Score = 151 bits (381), Expect = 4e-34
Identities = 139/532 (26%), Positives = 225/532 (42%), Gaps = 22/532 (4%)
Frame = +3
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGE---SPQARALASQLQDSLKDLKAQMQEAMTQE 594
R+ ++A+C+ V + SP Q+ +DL+ Q+++A+
Sbjct: 1014 RERIVAECNAVRQALQDLLSEYMSNMSQKDNSPGLSRAIDQMCRKTRDLRRQLRKAVVDH 1193
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXN 654
VSD F +TTTP+ L AA + E+ E++ F H+ +L N
Sbjct: 1194 VSDSFLETTTPLLDLIEAAKS-----GNEKKVREKSEIFTKHAEKL-VEVANLVCSMSNN 1355
Query: 655 KSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
+ V+ ++ + L PQVI+AA IL P ++ A E+ T + W V +T VD
Sbjct: 1356 EDGVKMVRYAAAQIESLCPQVINAASILTVRPNSKVAQENMTTYRQAWEVQVRILTEAVD 1535
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ + L A A +I R++R+ V + E++N
Sbjct: 1536 DITTIDDFLAVSENHILEDVNKCVMALQVGDARDLRATAGAIQGRSSRVCNVVEAEMDNY 1715
Query: 775 E----DPKFREAVKAASDELSKTISPMVMDAKAVAGNISDPGL-QKSFLDSGYRILGAVA 829
E + EAVK D++ V A N S+ + + F+D+ + V
Sbjct: 1716 EPCIYTKRVLEAVKVLRDQVMMKFDQRVGAAVGALSNNSNKDVDENDFIDASRLVYDGVR 1895
Query: 830 KVREAXXXXXXXXXXXXXXXX--XXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 887
++R A LT E
Sbjct: 1896 EIRRAVLMNRSSEDLDTDTEFEPVEDLTLETRSRSSAHTGDQTVDEYPDISGICTAREAM 2075
Query: 888 QKAGE----VINQPMMMAARQ---LHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGG 940
+K E I Q + + R+ E KW GNDII AK M ++M EM+ RG
Sbjct: 2076 RKMTEEDKQKIAQQVELFRREKLTFDSEVAKWDDTGNDIIFLAKHMCMIMMEMTDFTRGR 2255
Query: 941 SGTKRAL--IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKIL 998
K + I AK I++A ++ +L +E+A+QC + + +LL +RI Q++I
Sbjct: 2256 GPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKKDLLAYLQRIALYCHQIQIT 2435
Query: 999 STVKATMLGRTNISDE---ESEQATEMLVHNAQNLMQSVKETVREAEAASIK 1047
S VKA + NIS E + L+ A+NLM +V TV+ + AS K
Sbjct: 2436 SKVKADV---QNISGELIVSGLDSATSLIQAAKNLMNAVVLTVKYSYVASTK 2582
>gb|AY051780.1| Drosophila melanogaster LD30423 full length cDNA
Length = 2998
Score = 150 bits (380), Expect = 5e-34
Identities = 138/532 (25%), Positives = 224/532 (41%), Gaps = 22/532 (4%)
Frame = +2
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGE---SPQARALASQLQDSLKDLKAQMQEAMTQE 594
R+ ++A+C+ V + SP Q+ +DL+ Q+++A+
Sbjct: 1031 RERIVAECNAVRQALQDLLSEYMSNMSQKDNSPGLSRAIDQMCRKTRDLRRQLRKAVVDH 1210
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXN 654
VSD F +TTTP+ L AA + E+ E++ F H+ +L N
Sbjct: 1211 VSDSFLETTTPLLDLIEAAKS-----GNEKKVREKSEIFTKHAEKL-VEVANLVCSMSNN 1372
Query: 655 KSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
+ V+ ++ + L PQVI+AA IL P ++ A E+ T + W V +T VD
Sbjct: 1373 EDGVKMVRYAAAQIESLCPQVINAASILTVRPNSKVAQENMTTYRQAWEVQVRILTEAVD 1552
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ L SE I +D++KC +A+ + L A A +I R++R+ V + E++N
Sbjct: 1553 DITTIDDFLAVSENHILEDVNKCVMALQVGDARDLRATAGAIQGRSSRVCNVVEAEMDNY 1732
Query: 775 E----DPKFREAVKAASDELSKTISPMVMDAKAVAGNISDPGL-QKSFLDSGYRILGAVA 829
E + EAVK D++ V A N S+ + + F+D+ + V
Sbjct: 1733 EPCIYTKRVLEAVKVLRDQVMMKFDQRVGAAVGALSNNSNKDVDENDFIDASRLVYDGVR 1912
Query: 830 KVREAXXXXXXXXXXXXXXXX--XXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 887
++R A LT E
Sbjct: 1913 EIRRAVLMNRSSEDLDTDTEFEPVEDLTLETRSRSSAHTGDQTVDEYPDISGICTAREAM 2092
Query: 888 QKAGE-----VINQPMMMAARQL--HDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGG 940
+K E + Q + +L E KW GNDII AK M ++M EM+ RG
Sbjct: 2093 RKMTEEDKQKIAQQVELFRREKLTSDSEVAKWDDTGNDIIFLAKHMCMIMMEMTDFTRGR 2272
Query: 941 SGTKRAL--IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKIL 998
K + I AK I++A ++ +L +E+A+QC + + +LL +RI Q++I
Sbjct: 2273 GPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKKDLLAYLQRIALYCHQIQIT 2452
Query: 999 STVKATMLGRTNISDE---ESEQATEMLVHNAQNLMQSVKETVREAEAASIK 1047
S VKA + NIS E + L+ A+NLM +V TV+ + AS K
Sbjct: 2453 SKVKADV---QNISGELIVSGLDSATSLIQAAKNLMNAVVLTVKYSYVASTK 2599
>gb|U03100.1|HSU03100 Human alpha2(E)-catenin mRNA, complete cds
Length = 3526
Score = 144 bits (363), Expect = 5e-32
Identities = 136/554 (24%), Positives = 222/554 (39%), Gaps = 38/554 (6%)
Frame = +2
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLK---DLKAQMQEAMTQE 594
R+ ++A+C+ V G ++ AL S + K DL+ Q+++A+
Sbjct: 992 RERIVAECNAVRQACRTCVSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDH 1171
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXN 654
VSD F +T P+ +L AA N +EV E A F H+ +L N
Sbjct: 1172 VSDSFLETNVPLLVLIEAAKNG----NEKEV-KEYAQVFREHANKLIEVANLACSISN-N 1333
Query: 655 KSTVEGIQASVKTARELTPQVISAAR-ILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLV 713
+ V+ ++ S PQVI+AA L P ++ A E+ + K QW V +T V
Sbjct: 1334 EEGVKLVRMSASQLEAGCPQVINAATWALAPKPQSKLAQENMDLFKEQWEKQVRVLTDAV 1513
Query: 714 DEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVEN 773
D+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 1514 DDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDN 1693
Query: 774 SEDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDSGYRILGAV 828
E + E V A+ LS T+ P + +A++ + + P + F+D+ + +
Sbjct: 1694 YEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGI 1873
Query: 829 AKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 888
+R+A T++ Q
Sbjct: 1874 RDIRKAVLMIRTPEELDDSDFE----TEDFDVRSETSVQTEDDQLIAGQSARAIMAQLPQ 2041
Query: 889 KAGEVINQPMMMAARQ---LHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKR 945
+ I + + + L E KW GNDII AK+M ++M EM+ RG K
Sbjct: 2042 EQKAKIREQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKN 2221
Query: 946 A--LIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKA 1003
+I AK IA+A + +L + + C D + +LL +RI QL I S VKA
Sbjct: 2222 TSDVISAAKKIAEAGSRMDKLGRTIRDHCPDSACKQDLLAYLQRIALYCHQLNICSKVKA 2401
Query: 1004 TM--LGRTNISDEESE----------------------QATEMLVHNAQNLMQSVKETVR 1039
+ LG + + + L+ A+NLM +V +TV+
Sbjct: 2402 EVQNLGGELVVSGNCDTCGALQGLKGWPPPLCLATHWVDSAMSLIQAAKNLMNAVVQTVK 2581
Query: 1040 EAEAASIKIRTDAG 1053
+ AS K + G
Sbjct: 2582 ASYVASTKYQKSQG 2623
Score = 70.5 bits (171), Expect = 9e-10
Identities = 81/374 (21%), Positives = 155/374 (40%), Gaps = 5/374 (1%)
Frame = +2
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPV--AAVQAAVSNLVRVGKETVQ 63
T +E +LEP+ Q++ LV + +G + K A V A+V+ A N + G + +
Sbjct: 68 TLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHVLAASVEQATENFLEKGDKIAK 247
Query: 64 TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123
E Q LK ++ A V + AA DP S R ++ + +LS + LL
Sbjct: 248 --ESQFLKEELVVAVEDVRKQGDLMKAAAGEFADDPCSSVKRGNMVRAAPALLSAVTRLL 421
Query: 124 LTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELT 183
+ D A+V K++ K + + + +DL K L P + K+ M +RQQEL
Sbjct: 422 ILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGNQYKALKPEVDKLNIMAAKRQQELK 601
Query: 184 HQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINE 243
HR + + ++ +P+L +A + + ++ + NR+ +++ +
Sbjct: 602 DVGHRDQMAAARGILQSNVPILYTASQACL-----QHPDVAAYKANRDLIYKQLQQAVTG 766
Query: 244 IIRVLQLTSWDE-DAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQI 302
I Q T+ D+ + AL + D ++ + P + E+ + I
Sbjct: 767 ISNAAQATASDDASQHQGGGGGELAYALNNFDKQIIVDPLSFSEERFRP--SLEERLESI 940
Query: 303 LDEAGKVGE-LCAGKERRE-ILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL 360
+ A + + C +RRE I+ C + Q G +++ ++ +
Sbjct: 941 ISGAALMADSSCTRDDRRERIVAECNAVRQACRTCVSEYMGNAGRK----ERSDALNSAI 1108
Query: 361 DVLTAKVENAARKL 374
D +T K + R+L
Sbjct: 1109DKMTKKTRDLRRQL 1150
>dbj|AB041262.1|AB041262 Mus musculus mRNA for vinculin, partial cds
Length = 1992
Score = 142 bits (357), Expect = 2e-31
Identities = 77/97 (79%), Positives = 79/97 (81%)
Frame = +2
Query: 965 AKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLV 1024
AKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLV
Sbjct: 2 AKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLV 181
Query: 1025 HNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRK 1061
HN QNLMQSVKE + + LRWVRK
Sbjct: 182 HNVQNLMQSVKEMCERLNCFN-QNPNRCWLYLRWVRK 289
>gb|U40802.2| Caenorhabditis elegans cosmid ZC477, complete sequence
Length = 31787
Score = 140 bits (352), Expect = 9e-31
Identities = 93/280 (33%), Positives = 144/280 (51%), Gaps = 1/280 (0%)
Frame = -3
Query: 137 VCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMN 196
VC+G +L + T +D+ P + + ++ RQQELTHQ HR +L+ M+
Sbjct: 6294 VCEGNFLFLN*L*YIPTFQDI-------SPVLHDVTNDVNLRQQELTHQVHREILIRCMD 6136
Query: 197 TVKELLPVLISAMKIFVTTKNSK-NQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDE 255
++K + P+LI +MK + QG EA+ NRNF ++M+ E+NEIIRVLQLT++DE
Sbjct: 6135 SIKVIAPILICSMKTSIELGTPHPRQGHAEAIANRNFMSQRMTEEMNEIIRVLQLTTYDE 5956
Query: 256 DAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAG 315
D W + + M++AL++ S L A WL DP+A G GE+AIR+I + A ++
Sbjct: 5955 DEWDADNVTVMRKALSAAKSLLTAALDWLADPHARSGAVGEKAIRRICEYADRISARALP 5776
Query: 316 KERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLE 375
++ + I + + TD++ +LR GQ P A Q AR+L+
Sbjct: 5775 EDAQSIKRSIFEITSFTDELCNLRNNGQ---PDRENLAAQ--------------TARRLK 5647
Query: 376 AMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEA 415
+ S+ S DA QN A +GG G L +A
Sbjct: 5646 DLVGSQNSSGLMGDALQN--AQRHGGANPAHTAAGRLEQA 5533
Score = 97.8 bits (242), Expect(2) = 2e-26
Identities = 51/101 (50%), Positives = 70/101 (68%), Gaps = 16/101 (15%)
Frame = -1
Query: 895 NQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA-------- 946
+QPM+ AA LH+E ++WSS+ NDI+AAAKRMA+LMA +S+LVRG GTK+
Sbjct: 1484 HQPMLAAAHNLHNELKQWSSQENDIVAAAKRMAILMARLSQLVRGEGGTKKVSFVEKKIV 1305
Query: 947 --------LIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRT 979
LI C+K IA +S+EVTRLA ++A+ CTD ++RT
Sbjct: 1304 ILMLNLKDLINCSKAIADSSEEVTRLAVQLARLCTDIKMRT 1182
Score = 87.8 bits (216), Expect = 5e-15
Identities = 43/65 (66%), Positives = 52/65 (79%)
Frame = -1
Query: 98 DPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDL 157
DPYSVPAR LIDG+RGIL GTS LLL FDE+EVRKIIRVC+ +Y+ V+EV+E+M DL
Sbjct: 6479 DPYSVPARKKLIDGARGILQGTSALLLCFDESEVRKIIRVCRKANDYVAVSEVIESMADL 6300
Query: 158 VTYTK 162
+ K
Sbjct: 6299 QQFVK 6285
Score = 75.1 bits (183), Expect = 4e-11
Identities = 35/51 (68%), Positives = 42/51 (81%)
Frame = -1
Query: 1014 EESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPW 1064
EE ++A + LVHNAQNLMQSVK+ VR AEAASIKIRT++G LRW+RK W
Sbjct: 707 EEDDEAMQQLVHNAQNLMQSVKDVVRAAEAASIKIRTNSGLRLRWLRKPMW 555
Score = 67.8 bits (164), Expect = 6e-09
Identities = 58/189 (30%), Positives = 89/189 (46%), Gaps = 28/189 (14%)
Frame = -3
Query: 371 ARKLEAMTNSKQSIAKKIDAAQNWLADPNG--GPEGEEQIRGALAEARKIAELCDDPKER 428
A + M + + + AA +WLADP+ G GE+ IR A +I+ P++
Sbjct: 5943 ADNVTVMRKALSAAKSLLTAALDWLADPHARSGAVGEKAIRRICEYADRISARAL-PEDA 5767
Query: 429 DDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNR------AVA 482
I RS+ EI + T +L +LR G+ P+ LA Q A L++L N A+
Sbjct: 5766 QSIKRSIFEITSFTDELCNLRNNGQ---PDRENLAAQTARRLKDLVGSQNSSGLMGDALQ 5596
Query: 483 NSRP---AKAAVHLEGKIEQA-----------------QRWIDNPTVDDRGVGQAAIRGL 522
N++ A A G++EQA RW+DNP +DD G+G A+R L
Sbjct: 5595 NAQRHGGANPAHTAAGRLEQALR*IKYYFETFYKYEYYSRWLDNPGLDDGGLGLQALRLL 5416
Query: 523 VAEGHRLAN 531
A+ +LA+
Sbjct: 5415 TADARKLAD 5389
Score = 64.7 bits (156), Expect = 5e-08
Identities = 35/103 (33%), Positives = 55/103 (52%), Gaps = 1/103 (0%)
Frame = -3
Query: 597 DVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXX-XXNK 655
D F+D TTP+K A A P PNRE+ F +++ +HS + +K
Sbjct: 4989 DDFADITTPLKQFVEAVHADPYDPNREQNFVDKSQRLTDHSQSMTTTARLVASCGPSKSK 4810
Query: 656 STVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETM 698
TVE I + + +LTPQ+++A R+ L NPG++ +HFE +
Sbjct: 4809 KTVEAILDTAEKVEQLTPQLVNAGRVRLHNPGSE---QHFENI 4690
Score = 54.3 bits (129), Expect = 7e-05
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 19/109 (17%)
Frame = -1
Query: 701 QWIDNVEKMTGLVDEAIDTKSLLDASEE-------------------AIKKDLDKCKVAM 741
Q+ D + ++ VD+AIDT + ASE A+++ + C+ A+
Sbjct: 4475 QYADALHRLRSHVDDAIDTGEFVRASETVSLLEILKIYRVTFICKL*AMRRYTNHCEGAI 4296
Query: 742 ANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDEL 790
LV ++ IAR NR+L+ A+ E +NSE+P F V+ A+D+L
Sbjct: 4295 NGADAHGLVNNSSQIARLGNRVLMTAQNEADNSEEPSFVSRVRNAADQL 4149
Score = 48.9 bits (115), Expect(2) = 2e-26
Identities = 24/27 (88%), Positives = 26/27 (95%)
Frame = -3
Query: 981 LLQVCERIPTISTQLKILSTVKATMLG 1007
LLQV ERIPTI+TQLK+LSTVKATMLG
Sbjct: 1125 LLQVSERIPTIATQLKVLSTVKATMLG 1045
Score = 45.1 bits (105), Expect = 0.041
Identities = 22/38 (57%), Positives = 27/38 (70%)
Frame = -1
Query: 20 ISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRV 57
+S LVI+HEE DG A+PDLT PV V AV NL++V
Sbjct: 7379 VSRLVILHEEAN-DGNAMPDLTGPVGMVSRAVGNLIQV 7269
Score = 42.0 bits (97), Expect = 0.34
Identities = 18/21 (85%), Positives = 21/21 (99%)
Frame = -2
Query: 1 MPVFHTRTIESILEPVAQQIS 21
MPVFHT+TIE+ILEPVAQQ+S
Sbjct: 9121 MPVFHTKTIENILEPVAQQVS 9059
>gb|J04804.1|CELDEB1A C.elegans vinculin (deb-1) gene, complete cds
Length = 12263
Score = 140 bits (352), Expect = 9e-31
Identities = 93/280 (33%), Positives = 144/280 (51%), Gaps = 1/280 (0%)
Frame = +3
Query: 137 VCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMN 196
VC+G +L + T +D+ P + + ++ RQQELTHQ HR +L+ M+
Sbjct: 5268 VCEGNFLFLN*L*YIPTFQDI-------SPVLHDVTNDVNLRQQELTHQVHREILIRCMD 5426
Query: 197 TVKELLPVLISAMKIFVTTKNSK-NQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDE 255
++K + P+LI +MK + QG EA+ NRNF ++M+ E+NEIIRVLQLT++DE
Sbjct: 5427 SIKVIAPILICSMKTSIELGTPHPRQGHAEAIANRNFMSQRMTEEMNEIIRVLQLTTYDE 5606
Query: 256 DAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAG 315
D W + + M++AL++ S L A WL DP+A G GE+AIR+I + A ++
Sbjct: 5607 DEWDADNVTVMRKALSAAKSLLTAALDWLADPHARSGAVGEKAIRRICEYADRISARALP 5786
Query: 316 KERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLE 375
++ + I + + TD++ +LR GQ P A Q AR+L+
Sbjct: 5787 EDAQSIKRSIFEITSFTDELCNLRNNGQ---PDRENLAAQ--------------TARRLK 5915
Query: 376 AMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEA 415
+ S+ S DA QN A +GG G L +A
Sbjct: 5916 DLVGSQNSSGLMGDALQN--AQRHGGANPAHTAAGRLEQA 6029
Score = 130 bits (326), Expect = 1e-27
Identities = 75/147 (51%), Positives = 96/147 (65%), Gaps = 34/147 (23%)
Frame = +1
Query: 895 NQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA-------- 946
+QPM+ AA LH+E ++WSS+ NDI+AAAKRMA+LMA +S+LVRG GTK+
Sbjct: 10078 HQPMLAAAHNLHNELKQWSSQENDIVAAAKRMAILMARLSQLVRGEGGTKKVSFVEKKIV 10257
Query: 947 --------LIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRT------------------N 980
LI C+K IA +S+EVTRLA ++A+ CTD ++RT
Sbjct: 10258 ILMLNLKDLINCSKAIADSSEEVTRLAVQLARLCTDIKMRTVSHLVHSI*RFKIYFHFQA 10437
Query: 981 LLQVCERIPTISTQLKILSTVKATMLG 1007
LLQV ERIPTI+TQLK+LSTVKATMLG
Sbjct: 10438 LLQVSERIPTIATQLKVLSTVKATMLG 10518
Score = 87.8 bits (216), Expect = 5e-15
Identities = 43/65 (66%), Positives = 52/65 (79%)
Frame = +1
Query: 98 DPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDL 157
DPYSVPAR LIDG+RGIL GTS LLL FDE+EVRKIIRVC+ +Y+ V+EV+E+M DL
Sbjct: 5083 DPYSVPARKKLIDGARGILQGTSALLLCFDESEVRKIIRVCRKANDYVAVSEVIESMADL 5262
Query: 158 VTYTK 162
+ K
Sbjct: 5263 QQFVK 5277
Score = 75.1 bits (183), Expect = 4e-11
Identities = 35/51 (68%), Positives = 42/51 (81%)
Frame = +3
Query: 1014 EESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPW 1064
EE ++A + LVHNAQNLMQSVK+ VR AEAASIKIRT++G LRW+RK W
Sbjct: 10857 EEDDEAMQQLVHNAQNLMQSVKDVVRAAEAASIKIRTNSGLRLRWLRKPMW 11009
Score = 67.8 bits (164), Expect = 6e-09
Identities = 58/189 (30%), Positives = 89/189 (46%), Gaps = 28/189 (14%)
Frame = +3
Query: 371 ARKLEAMTNSKQSIAKKIDAAQNWLADPNG--GPEGEEQIRGALAEARKIAELCDDPKER 428
A + M + + + AA +WLADP+ G GE+ IR A +I+ P++
Sbjct: 5619 ADNVTVMRKALSAAKSLLTAALDWLADPHARSGAVGEKAIRRICEYADRISARAL-PEDA 5795
Query: 429 DDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNR------AVA 482
I RS+ EI + T +L +LR G+ P+ LA Q A L++L N A+
Sbjct: 5796 QSIKRSIFEITSFTDELCNLRNNGQ---PDRENLAAQTARRLKDLVGSQNSSGLMGDALQ 5966
Query: 483 NSRP---AKAAVHLEGKIEQA-----------------QRWIDNPTVDDRGVGQAAIRGL 522
N++ A A G++EQA RW+DNP +DD G+G A+R L
Sbjct: 5967 NAQRHGGANPAHTAAGRLEQALR*IKYYFETFYKYEYYSRWLDNPGLDDGGLGLQALRLL 6146
Query: 523 VAEGHRLAN 531
A+ +LA+
Sbjct: 6147 TADARKLAD 6173
Score = 64.7 bits (156), Expect = 5e-08
Identities = 35/103 (33%), Positives = 55/103 (52%), Gaps = 1/103 (0%)
Frame = +3
Query: 597 DVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXX-XXNK 655
D F+D TTP+K A A P PNRE+ F +++ +HS + +K
Sbjct: 6573 DDFADITTPLKQFVEAVHADPYDPNREQNFVDKSQRLTDHSQSMTTTARLVASCGPSKSK 6752
Query: 656 STVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETM 698
TVE I + + +LTPQ+++A R+ L NPG++ +HFE +
Sbjct: 6753 KTVEAILDTAEKVEQLTPQLVNAGRVRLHNPGSE---QHFENI 6872
Score = 54.3 bits (129), Expect = 7e-05
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 19/109 (17%)
Frame = +1
Query: 701 QWIDNVEKMTGLVDEAIDTKSLLDASEE-------------------AIKKDLDKCKVAM 741
Q+ D + ++ VD+AIDT + ASE A+++ + C+ A+
Sbjct: 7087 QYADALHRLRSHVDDAIDTGEFVRASETVSLLEILKIYRVTFICKL*AMRRYTNHCEGAI 7266
Query: 742 ANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDEL 790
LV ++ IAR NR+L+ A+ E +NSE+P F V+ A+D+L
Sbjct: 7267 NGADAHGLVNNSSQIARLGNRVLMTAQNEADNSEEPSFVSRVRNAADQL 7413
Score = 45.1 bits (105), Expect = 0.041
Identities = 22/38 (57%), Positives = 27/38 (70%)
Frame = +1
Query: 20 ISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRV 57
+S LVI+HEE DG A+PDLT PV V AV NL++V
Sbjct: 4183 VSRLVILHEEAN-DGNAMPDLTGPVGMVSRAVGNLIQV 4293
Score = 42.0 bits (97), Expect = 0.34
Identities = 18/21 (85%), Positives = 21/21 (99%)
Frame = +2
Query: 1 MPVFHTRTIESILEPVAQQIS 21
MPVFHT+TIE+ILEPVAQQ+S
Sbjct: 2441 MPVFHTKTIENILEPVAQQVS 2503
>gb|S87223.1|S87218S3 vinculin [human, Genomic, 434 nt, segment 3 of 3]
Length = 434
Score = 132 bits (333), Expect = 1e-28
Identities = 69/69 (100%), Positives = 69/69 (100%)
Frame = +3
Query: 916 GNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDK 975
GNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDK
Sbjct: 168 GNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDK 347
Query: 976 RIRTNLLQV 984
RIRTNLLQV
Sbjct: 348 RIRTNLLQV 374
>gb|S87180.1|S87175S3 meta-vinculin=muscle-specific variant of vinculin [human, Genomic,
434 nt, segment 3 of 3]
Length = 434
Score = 132 bits (333), Expect = 1e-28
Identities = 69/69 (100%), Positives = 69/69 (100%)
Frame = +3
Query: 916 GNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDK 975
GNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDK
Sbjct: 168 GNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDK 347
Query: 976 RIRTNLLQV 984
RIRTNLLQV
Sbjct: 348 RIRTNLLQV 374
>gb|AF016852.1|AF016852 Caenorhabditis elegans HMP-1 mRNA, complete cds
Length = 3220
Score = 124 bits (310), Expect = 7e-26
Identities = 125/537 (23%), Positives = 209/537 (38%), Gaps = 25/537 (4%)
Frame = +3
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALA---SQLQDSLKDLKAQMQEAMTQE 594
+Q ++A+C+ + + G + +++ KDL+ ++ A+
Sbjct: 993 KQKIVAECNNLRQALQELLTEYEKSTGRRDDNDDIPLGIAEVHKRTKDLRRHLRRAIVDH 1172
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXN 654
+SD F DT TP+ LL AA EE R+ F+ H+ +
Sbjct: 1173 ISDAFLDTRTPLILLIEAAKE-----GHEENTRYRSKMFQEHANEIVSVARLSCQLSSDV 1337
Query: 655 KSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
+S V IQ + +L PQV AA +L P ++ A E+ ET KN W D V +T +D
Sbjct: 1338 ES-VSVIQHTAAQLEKLAPQVAQAAILLCHQPTSKTAQENMETYKNAWFDKVRLLTTALD 1514
Query: 715 EAIDTKSLLDASEEAIKKDLDK-CKVAMANIQP--------QMLVAGATSIARRANRILL 765
L SE I +D ++ K AN + + A SI RA R+
Sbjct: 1515 NITTLDDFLAVSEAHIVEDCERGIKGITANASTPDENAANCETVDCAAGSIRGRALRVCD 1694
Query: 766 VAKREVENSEDPKFREAVKAASDEL-SKTISPMVMDAKAVAGNISDPGL----------Q 814
V E++ ++ ++ E VK A L ++ + A A+A GL
Sbjct: 1695 VVDAEMDFLQNSEYTETVKQAVRILKTQRVDQFAERASALANRQEAHGLTWDPKTKEEEM 1874
Query: 815 KSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXX 874
F+++ + AV +R A D +
Sbjct: 1875 NEFINACTLVHDAVKDIRHALLMNRSMNDVDSDVEYE---ADGVGAANADANRTISEQEN 2045
Query: 875 XXXXXXXXXXXXXQKAGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMS 934
+K I+ + + E KW GNDII+ A M +M M+
Sbjct: 2046 QQNLMRRLPEEEKKKIQAQID-IFKVTQTRFEREVAKWDETGNDIISLANNMCKIMMSMT 2222
Query: 935 RLVRGGSGTKRAL--IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTIS 992
RG K + I+ A++I+ ++ LA+++ ++ D + + +LL +I
Sbjct: 2223 EFTRGCGPLKTTMDVIRAAQEISLNGSKLNALARQIGEESADSQTKKDLLAYLSQITLYC 2402
Query: 993 TQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIR 1049
QL I S VKA + N + + L+ A+NL+ +V +TV+ A AS K R
Sbjct: 2403 QQLNICSKVKADVTQVGNELVVSALDSAMSLIQTARNLLTAVVQTVKAAYIASTKFR 2573
Score = 42.7 bits (99), Expect = 0.20
Identities = 44/214 (20%), Positives = 94/214 (43%), Gaps = 9/214 (4%)
Frame = +3
Query: 44 VAAVQAAVSNLVRVGKETVQ----TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDP 99
VA + AAV+N ++ G + D + A V++ ++Q + D
Sbjct: 174 VATLDAAVANFLQTGSFAISKCPIANSDPRAIDLLHEALGAVQDTGQVMIQTGRDFVRDS 353
Query: 100 YSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVET-----M 154
S R + R +L+ + L+ D +V+ I+ + E T +++E +
Sbjct: 354 TSTNKRAIATNSGRNLLTAVAKFLILADSIDVKVIVDKVDEVRE--TAHQMIEADTKIKV 527
Query: 155 EDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVT 214
+DL L + ++ + R +L R L+ + + +++ P+L ++ + FV
Sbjct: 528 DDLYNL---LISQIEELDITVRRRAIDLVKPNQRDDLLAARSALRQTAPLLYTSTRTFV- 695
Query: 215 TKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVL 248
++ EEA +NR++T ++M + +N + VL
Sbjct: 696 ----RHPEHEEARRNRDYTADEMHSALNALESVL 785
>ref|NM_073584.1| alpha-catenin
Length = 2784
Score = 124 bits (310), Expect = 7e-26
Identities = 125/537 (23%), Positives = 209/537 (38%), Gaps = 25/537 (4%)
Frame = +1
Query: 538 RQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALA---SQLQDSLKDLKAQMQEAMTQE 594
+Q ++A+C+ + + G + +++ KDL+ ++ A+
Sbjct: 970 KQKIVAECNNLRQALQELLTEYEKSTGRRDDNDDIPLGIAEVHKRTKDLRRHLRRAIVDH 1149
Query: 595 VSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXN 654
+SD F DT TP+ LL AA EE R+ F+ H+ +
Sbjct: 1150 ISDAFLDTRTPLILLIEAAKE-----GHEENTRYRSKMFQEHANEIVSVARLSCQLSSDV 1314
Query: 655 KSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
+S V IQ + +L PQV AA +L P ++ A E+ ET KN W D V +T +D
Sbjct: 1315 ES-VSVIQHTAAQLEKLAPQVAQAAILLCHQPTSKTAQENMETYKNAWFDKVRLLTTALD 1491
Query: 715 EAIDTKSLLDASEEAIKKDLDK-CKVAMANIQP--------QMLVAGATSIARRANRILL 765
L SE I +D ++ K AN + + A SI RA R+
Sbjct: 1492 NITTLDDFLAVSEAHIVEDCERGIKGITANASTPDENAANCETVDCAAGSIRGRALRVCD 1671
Query: 766 VAKREVENSEDPKFREAVKAASDEL-SKTISPMVMDAKAVAGNISDPGL----------Q 814
V E++ ++ ++ E VK A L ++ + A A+A GL
Sbjct: 1672 VVDAEMDFLQNSEYTETVKQAVRILKTQRVDQFAERASALANRQEAHGLTWDPKTKEEEM 1851
Query: 815 KSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXX 874
F+++ + AV +R A D +
Sbjct: 1852 NEFINACTLVHDAVKDIRHALLMNRSMNDVDSDVEYE---ADGVGAANADANRTISEQEN 2022
Query: 875 XXXXXXXXXXXXXQKAGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMS 934
+K I+ + + E KW GNDII+ A M +M M+
Sbjct: 2023 QQNLMRRLPEEEKKKIQAQID-IFKVTQTRFEREVAKWDETGNDIISLANNMCKIMMSMT 2199
Query: 935 RLVRGGSGTKRAL--IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTIS 992
RG K + I+ A++I+ ++ LA+++ ++ D + + +LL +I
Sbjct: 2200 EFTRGCGPLKTTMDVIRAAQEISLNGSKLNALARQIGEESADSQTKKDLLAYLSQITLYC 2379
Query: 993 TQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIR 1049
QL I S VKA + N + + L+ A+NL+ +V +TV+ A AS K R
Sbjct: 2380 QQLNICSKVKADVTQVGNELVVSALDSAMSLIQTARNLLTAVVQTVKAAYIASTKFR 2550
Score = 42.7 bits (99), Expect = 0.20
Identities = 44/214 (20%), Positives = 94/214 (43%), Gaps = 9/214 (4%)
Frame = +1
Query: 44 VAAVQAAVSNLVRVGKETVQ----TTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDP 99
VA + AAV+N ++ G + D + A V++ ++Q + D
Sbjct: 151 VATLDAAVANFLQTGSFAISKCPIANSDPRAIDLLHEALGAVQDTGQVMIQTGRDFVRDS 330
Query: 100 YSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVET-----M 154
S R + R +L+ + L+ D +V+ I+ + E T +++E +
Sbjct: 331 TSTNKRAIATNSGRNLLTAVAKFLILADSIDVKVIVDKVDEVRE--TAHQMIEADTKIKV 504
Query: 155 EDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVT 214
+DL L + ++ + R +L R L+ + + +++ P+L ++ + FV
Sbjct: 505 DDLYNL---LISQIEELDITVRRRAIDLVKPNQRDDLLAARSALRQTAPLLYTSTRTFV- 672
Query: 215 TKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVL 248
++ EEA +NR++T ++M + +N + VL
Sbjct: 673 ----RHPEHEEARRNRDYTADEMHSALNALESVL 762
>gb|L04933.1|HUMVCLX Human vinculin (VCL) gene exon 1, 5' end
Length = 1435
Score = 112 bits (281), Expect = 2e-22
Identities = 57/60 (95%), Positives = 58/60 (96%)
Frame = +3
Query: 1 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE 60
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRV +
Sbjct: 1191 MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVSAQ 1370
>gb|S52276.1|S52270S4 vinculin=talin-binding cytoskeletal protein {exons 3-6} [chickens,
Genomic, 205 nt, segment 4 of 4]
Length = 205
Score = 107 bits (267), Expect = 7e-21
Identities = 52/57 (91%), Positives = 56/57 (98%)
Frame = +3
Query: 205 LISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASK 261
+ +AMKIFVTTKN+K+QGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASK
Sbjct: 12 IFTAMKIFVTTKNTKSQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASK 182
>gb|L13299.1|MUSVIN01 Mus musculus vinculin gene, exon 3
Length = 1073
Score = 103 bits (258), Expect = 7e-20
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 74 MPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEV 131
+PP +VENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEV
Sbjct: 359 LPP---RVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEV 523
>gb|S52270.1|S52270S1 vinculin=talin-binding cytoskeletal protein {exons 3-6} [chickens,
Genomic, 172 nt, segment 1 of 4]
Length = 172
Score = 101 bits (252), Expect = 4e-19
Identities = 50/54 (92%), Positives = 53/54 (97%)
Frame = +2
Query: 78 FIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEV 131
F +VENACTKLV+AAQMLQ+DPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEV
Sbjct: 2 FHRVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEV 163
>gb|AC010027.5| Drosophila melanogaster 3L BAC RP98-22B15 (Roswell Park Cancer Institute
Drosophila BAC Library) complete sequence
Length = 168058
Score = 87.8 bits (216), Expect = 5e-15
Identities = 66/228 (28%), Positives = 108/228 (46%), Gaps = 4/228 (1%)
Frame = -3
Query: 566 SPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEV 625
SP Q+ +DL+ Q+++A+ VSD F +TTTP+ L AA + E+
Sbjct: 151559 SPGLSRAIDQMCRKTRDLRRQLRKAVVDHVSDSFLETTTPLLDLIEAAKS-----GNEKK 151395
Query: 626 FDERAANFENHSGRLXXXXXXXXXXXXXNKSTVEGIQASVKTARELTPQVISAARILLRN 685
E++ F H+ +L N+ V+ ++ + L PQVI+AA IL
Sbjct: 151394 VREKSEIFTKHAEKL-VEVANLVCSMSNNEDGVKMVRYAAAQIESLCPQVINAASILTVR 151218
Query: 686 PGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQ 745
P ++ A E+ T + W V +T VD+ L SE I +D++KC +A+
Sbjct: 151217 PNSKVAQENMTTYRQAWEVQVRILTEAVDDITTIDDFLAVSENHILEDVNKCVMALQVGD 151038
Query: 746 PQMLVAGATSIARRANRILLVAKREVENSE----DPKFREAVKAASDE 789
+ L A A +I R++R+ V + E++N E + EAVK D+
Sbjct: 151037 ARDLRATAGAIQGRSSRVCNVVEAEMDNYEPCIYTKRVLEAVKVLRDQ 150894
Score = 45.1 bits (105), Expect = 0.041
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = -1
Query: 938 RGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKI 997
RG T +I AK I++A ++ +L +E+A+QC + + +LL +RI Q++I
Sbjct: 141649 RGPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKKDLLAYLQRIALYCHQIQI 141470
Query: 998 LSTVKATMLGRTNISDE 1014
S VKA + NIS E
Sbjct: 141469 TSKVKADV---QNISGE 141428
>gb|AE002656.1|AE002656 Drosophila melanogaster genomic scaffold 142000013386032, complete
sequence
Length = 192318
Score = 87.8 bits (216), Expect = 5e-15
Identities = 66/228 (28%), Positives = 108/228 (46%), Gaps = 4/228 (1%)
Frame = -3
Query: 566 SPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEV 625
SP Q+ +DL+ Q+++A+ VSD F +TTTP+ L AA + E+
Sbjct: 166774 SPGLSRAIDQMCRKTRDLRRQLRKAVVDHVSDSFLETTTPLLDLIEAAKS-----GNEKK 166610
Query: 626 FDERAANFENHSGRLXXXXXXXXXXXXXNKSTVEGIQASVKTARELTPQVISAARILLRN 685
E++ F H+ +L N+ V+ ++ + L PQVI+AA IL
Sbjct: 166609 VREKSEIFTKHAEKL-VEVANLVCSMSNNEDGVKMVRYAAAQIESLCPQVINAASILTVR 166433
Query: 686 PGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQ 745
P ++ A E+ T + W V +T VD+ L SE I +D++KC +A+
Sbjct: 166432 PNSKVAQENMTTYRQAWEVQVRILTEAVDDITTIDDFLAVSENHILEDVNKCVMALQVGD 166253
Query: 746 PQMLVAGATSIARRANRILLVAKREVENSE----DPKFREAVKAASDE 789
+ L A A +I R++R+ V + E++N E + EAVK D+
Sbjct: 166252 ARDLRATAGAIQGRSSRVCNVVEAEMDNYEPCIYTKRVLEAVKVLRDQ 166109
Score = 45.1 bits (105), Expect = 0.041
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = -1
Query: 938 RGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKI 997
RG T +I AK I++A ++ +L +E+A+QC + + +LL +RI Q++I
Sbjct: 156864 RGPLKTTMDVINAAKKISEAGTKLDKLTREIAEQCPESSTKKDLLAYLQRIALYCHQIQI 156685
Query: 998 LSTVKATMLGRTNISDE 1014
S VKA + NIS E
Sbjct: 156684 TSKVKADV---QNISGE 156643
>gb|BC013847.1|BC013847 Homo sapiens, clone IMAGE:4387297, mRNA
Length = 1687
Score = 84.0 bits (206), Expect = 8e-14
Identities = 55/102 (53%), Positives = 56/102 (53%)
Frame = +1
Query: 799 MDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDEL 858
MDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREA RLTDEL
Sbjct: 1 MDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEPDFPPPPPDLEQLRLTDEL 180
Query: 859 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKAGEVINQPMMM 900
A QKAGEVINQPMM+
Sbjct: 181 APPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMML 306
>gb|S52272.1|S52270S3 vinculin=talin-binding cytoskeletal protein {exons 3-6} [chickens,
Genomic, 155 nt, segment 3 of 4]
Length = 155
Score = 83.2 bits (204), Expect = 1e-13
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 167 GMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAM 209
GMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLIS +
Sbjct: 16 GMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISGI 144
>ref|XM_045972.5| Homo sapiens alpha-catenin-like protein (VR22), mRNA
Length = 1006
Score = 78.6 bits (192), Expect = 3e-12
Identities = 51/147 (34%), Positives = 75/147 (50%), Gaps = 2/147 (1%)
Frame = +2
Query: 904 QLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRA--LIQCAKDIAKASDEV 961
+L E W NDII AK M ++M EM+ RG K +I AK I+++ +
Sbjct: 374 KLDAEIEIWDDTSNDIIVLAKNMCMIMMEMTDFTRGKGPLKHTTDVIYAAKMISESGSRM 553
Query: 962 TRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATE 1021
LA+++A QC D + +LL E+I S QLKI S VKA + + +
Sbjct: 554 DVLARQIANQCPDPSCKQDLLAYLEQIKFYSHQLKICSQVKAEIQNLGGELIMSALDSVT 733
Query: 1022 MLVHNAQNLMQSVKETVREAEAASIKI 1048
L+ A+NLM +V +TV+ + AS KI
Sbjct: 734 SLIQAAKNLMNAVVQTVKMSYIASTKI 814
>gb|S52271.1|S52270S2 vinculin=talin-binding cytoskeletal protein {exons 3-6} [chickens,
Genomic, 127 nt, segment 2 of 4]
Length = 127
Score = 77.0 bits (188), Expect = 1e-11
Identities = 37/38 (97%), Positives = 38/38 (99%)
Frame = +1
Query: 131 VRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGM 168
VRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPG+
Sbjct: 10 VRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGL 123
>gb|L13300.1|MUSVIN02 Mus musculus vinculin gene, exon 4
Length = 389
Score = 77.0 bits (188), Expect = 1e-11
Identities = 37/38 (97%), Positives = 38/38 (99%)
Frame = +1
Query: 130 EVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPG 167
+VRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPG
Sbjct: 46 QVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPG 159
>gb|AC024780.1|AC024780 Caenorhabditis elegans cosmid Y43B11AR, complete sequence
Length = 15768
Score = 75.1 bits (183), Expect = 4e-11
Identities = 35/51 (68%), Positives = 42/51 (81%)
Frame = -3
Query: 1014 EESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPW 1064
EE ++A + LVHNAQNLMQSVK+ VR AEAASIKIRT++G LRW+RK W
Sbjct: 15175 EEDDEAMQQLVHNAQNLMQSVKDVVRAAEAASIKIRTNSGLRLRWLRKPMW 15023
Score = 48.9 bits (115), Expect(2) = 6e-10
Identities = 24/27 (88%), Positives = 26/27 (95%)
Frame = -2
Query: 981 LLQVCERIPTISTQLKILSTVKATMLG 1007
LLQV ERIPTI+TQLK+LSTVKATMLG
Sbjct: 15593 LLQVSERIPTIATQLKVLSTVKATMLG 15513
Score = 42.0 bits (97), Expect(2) = 6e-10
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = -3
Query: 947 LIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRT 979
LI C+K IA +S+EVTRLA ++A+ CTD ++RT
Sbjct: 15748 LINCSKAIADSSEEVTRLAVQLARLCTDIKMRT 15650
>emb|Z81579.1|CER13H4 Caenorhabditis elegans cosmid R13H4, complete sequence
Length = 38504
Score = 73.2 bits (178), Expect = 1e-10
Identities = 48/163 (29%), Positives = 73/163 (44%)
Frame = +3
Query: 574 SQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANF 633
+++ KDL+ ++ A+ +SD F DT TP+ LL AA EE R+ F
Sbjct: 16242 AEVHKRTKDLRRHLRRAIVDHISDAFLDTRTPLILLIEAAKE-----GHEENTRYRSKMF 16406
Query: 634 ENHSGRLXXXXXXXXXXXXXNKSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYE 693
+ H+ + +S V IQ + +L PQV AA +L P ++ A E
Sbjct: 16407 QEHANEIVSVARLSCQLSSDVES-VSVIQHTAAQLEKLAPQVAQAAILLCHQPTSKTAQE 16583
Query: 694 HFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDK 736
+ ET KN W D V +T +D L SE I +D ++
Sbjct: 16584 NMETYKNAWFDKVRLLTTALDNITTLDDFLAVSEAHIVEDCER 16712
Score = 52.8 bits (125), Expect = 2e-04
Identities = 29/96 (30%), Positives = 48/96 (49%), Gaps = 2/96 (2%)
Frame = +3
Query: 908 EARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRAL--IQCAKDIAKASDEVTRLA 965
E KW GNDII+ A M +M M+ RG K + I+ A++I+ ++ LA
Sbjct: 17376 EVAKWDETGNDIISLANNMCKIMMSMTEFTRGCGPLKTTMDVIRAAQEISLNGSKLNALA 17555
Query: 966 KEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTV 1001
+++ ++ D + + +LL +I QL I S V
Sbjct: 17556 RQIGEESADSQTKKDLLAYLSQITLYCQQLNICSKV 17663
>gb|BC020328.1|BC020328 Mus musculus, clone IMAGE:4020609, mRNA
Length = 1867
Score = 70.9 bits (172), Expect = 7e-10
Identities = 45/140 (32%), Positives = 68/140 (48%)
Frame = +1
Query: 654 NKSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLV 713
N+ V+ ++ S L PQVI+AA L P ++ A E+ + K QW V +T V
Sbjct: 22 NEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAV 201
Query: 714 DEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVEN 773
D+ L SE I +D++KC +A+ L A +I RA R++ V E++N
Sbjct: 202 DDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDN 381
Query: 774 SEDPKFREAVKAASDELSKT 793
E + E V A+ LS T
Sbjct: 382 YEPGVYTEKVLEATKLLSNT 441
>gb|BC022004.1|BC022004 Homo sapiens, Similar to alpha-catenin-like protein, clone
MGC:26194 IMAGE:4823848, mRNA, complete cds
Length = 2379
Score = 61.2 bits (147), Expect = 5e-07
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 1/203 (0%)
Frame = +3
Query: 6 TRTIESILEPVAQQISHLVIMHEEGEVDGKA-IPDLTAPVAAVQAAVSNLVRVGKETVQT 64
T T+E +LEP+ Q++ LV + K + +A+V+ A NL+ G++ Q
Sbjct: 285 TFTVEKLLEPLIIQVTTLVNCPQNPSSRKKGRSKRASVLLASVEEATWNLLDKGEKIAQ- 461
Query: 65 TEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLL 124
E +LK ++ + KV L +A+ DP +P R+ ++ +R +L+ + LL+
Sbjct: 462 -EATVLKDELTASLEKVRKESEALKVSAERFTDDPCFLPKREAVVQAARALLAAVTRLLI 638
Query: 125 TFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTH 184
D +V +++ + V DL + LG + + + +RQQ+L
Sbjct: 639 LADMIDVMCLLQHVSAFQRTFESLKNVANKSDLQKTYQKLGKELENLDYLAFKRQQDLKS 818
Query: 185 QEHRVMLVNSMNTVKELLPVLIS 207
R + + ++KE P+L S
Sbjct: 819 PNQRDEIAGARASLKENSPLLHS 887
>gb|S87218.1|S87218S1 vinculin [human, Genomic, 260 nt, segment 1 of 3]
Length = 260
Score = 60.5 bits (145), Expect = 9e-07
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 888 QKAGEVINQPMMMAARQLHDEARKWSSK 915
QKAGEVINQPMMMAARQLHDEARKWSSK
Sbjct: 161 QKAGEVINQPMMMAARQLHDEARKWSSK 244
>gb|S87175.1|S87175S1 meta-vinculin=muscle-specific variant of vinculin [human, Genomic,
260 nt, segment 1 of 3]
Length = 260
Score = 60.5 bits (145), Expect = 9e-07
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 888 QKAGEVINQPMMMAARQLHDEARKWSSK 915
QKAGEVINQPMMMAARQLHDEARKWSSK
Sbjct: 161 QKAGEVINQPMMMAARQLHDEARKWSSK 244
>emb|Z37994.1|HSCTNNA1P H.sapiens alpha E-catenin pseudogene
Length = 4950
Score = 54.3 bits (129), Expect = 7e-05
Identities = 80/383 (20%), Positives = 132/383 (33%), Gaps = 28/383 (7%)
Frame = +2
Query: 654 NKSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLV 713
N+ V+ ++ S L PQV++AA + L P ++ A E+ + K + G
Sbjct: 2021 NEEGVKLVRMSASQLEALCPQVVNAA-LALAKPQSRLAQENMDLFK--------RTMGKT 2173
Query: 714 DEAIDTKS--------LLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILL 765
LL E+ +KC +A+ L A++I A +
Sbjct: 2174 SPCSHRCC**YYFH**LLGCLRESHFGKWNKCIIALQEKDVDGLDCTASAIQGWAAWAIH 2353
Query: 766 VAKREVENSEDPKFREAVKAASDELSKTISPMVMD-----AKAVAGNISDPGLQKSFLDS 820
+ E++N E + E V A+ LS T+ P + +A++ + + P + F+++
Sbjct: 2354 IVTSEMDNYEPGVYTEKVLEATKLLSNTVMPCFTEQAEAAVEALSSDPAQPMDENEFINA 2533
Query: 821 GYRILGAVAKVREAXXXXXXXXXXXXXXXXXXRLTDELAXXXXXXXXXXXXXXXXXXXXX 880
+ G + +R+A
Sbjct: 2534 SCLVYGGIRDIRKAVLMIRTPEDLDDSYFEMEDFNVRSRMSIQTKDNQLIAGQSVQAIMA 2713
Query: 881 XXXXXXXQKAGEVINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGG 940
K E + +L E KW + NDII AK+M ++M E++ G
Sbjct: 2714 QLP*EQKAKTAEQVAS-FQEEKSKLDAEVSKWDNSANDIIVLAKQMCMIMMEVTDFT*GK 2890
Query: 941 SGTKRAL--IQCAKDIAKASDEVTRLAKEVAKQCTDKRIR-----------TNLLQVCER 987
L I AK IA+A + +L + C D + LL
Sbjct: 2891 GPLPNTLDVISAAKKIAEAGSRMDKLGCTITDHCPDSACKQARPARLSLP*LGLLAYLHC 3070
Query: 988 IPTISTQLKILSTVKATM--LGR 1008
I L I S VKA M LGR
Sbjct: 3071 IALYCHLLNICSKVKAEMQNLGR 3139
>emb|AJ312390.1|MMU312390 Mus musculus mRNA for nonmuscle heavy chain myosin II-A (Myh9 gene)
Length = 7355
Score = 50.4 bits (119), Expect = 0.001
Identities = 84/390 (21%), Positives = 159/390 (40%), Gaps = 41/390 (10%)
Frame = +1
Query: 154 MEDLVTYTKNLGPGMTKMAKM---IDERQQEL-THQEHRVMLVNSMNTVKELLPVLISAM 209
MEDL++ ++G + ++ K ++++ +E+ T E + + K L V + AM
Sbjct: 4678 MEDLMSSKDDVGKSVHELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAM 4857
Query: 210 KI-FVTTKNSKNQGIEEALKNRNFTVEKMSAEINE----------IIRVLQLTSWDEDAW 258
K F +++ EE K V +M AE+ + + L++ D +A
Sbjct: 4858 KAQFERDLQGRDEQSEEKKKQLVRQVREMEAELEDERKQRSMAMAARKKLEMDLKDLEAH 5037
Query: 259 ---ASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDA------GEQAIRQILDEAGKV 309
A+K+ E + L + +++ L D AS + E+ ++ + E ++
Sbjct: 5038 IDTANKNREEAIKQLRKLQAQMKDCMRELDDTRASREEILAQAKENEKKLKSMEAEMIQL 5217
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
E A ER + + Q D++AD A G +A+++ +++ + +L ++E
Sbjct: 5218 QEELAAAERAK-----RQAQQERDELADEIANSSGKGALALEEKRRLEARIALLEEELEE 5382
Query: 370 AARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERD 429
E + + + +ID L + E R L K EL +E +
Sbjct: 5383 EQGNTELINDRLKKANLQIDQINTDLNLERSHAQKNENARQQLERQNK--ELKAKLQEME 5556
Query: 430 DILRSL--GEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNL-------------- 473
++S IAAL +K+ L Q ++ E +A +KQV + L
Sbjct: 5557 SAVKSKYKASIAALEAKIAQLEEQLDNETKERQAASKQVRRTEKKLKDVLLQVEDERRNA 5736
Query: 474 -QTKTNRAVANSRPAKAAVHLEGKIEQAQR 502
Q K A++R + LE E+AQR
Sbjct: 5737 EQFKDQADKASTRLKQLKRQLEEAEEEAQR 5826
>gb|U31463.1|RNU31463 Rattus norvegicus nonmuscle myosin heavy chain-A mRNA, complete cds
Length = 6060
Score = 49.7 bits (117), Expect = 0.002
Identities = 84/390 (21%), Positives = 160/390 (40%), Gaps = 41/390 (10%)
Frame = +1
Query: 154 MEDLVTYTKNLGPGMTKMAKM---IDERQQEL-THQEHRVMLVNSMNTVKELLPVLISAM 209
MEDL++ ++G + ++ K ++++ +E+ T E + + K L V + AM
Sbjct: 4537 MEDLMSSKDDVGKSVHELEKSNRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAM 4716
Query: 210 KI-FVTTKNSKNQGIEEALKNRNFTVEKMSAEINE----------IIRVLQLTSWDEDAW 258
K F +++ EE K V +M AE+ + + L++ D +A
Sbjct: 4717 KAQFERDLQGRDEQSEEKKKQLVRQVREMEAELEDERKQRSIAMAARKKLEMDLKDLEAH 4896
Query: 259 ---ASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDA------GEQAIRQILDEAGKV 309
A+K+ E + L + +++ + D AS + E+ ++ + E ++
Sbjct: 4897 IDTANKNREEAIKQLRKLQAQMKDCMRDVDDTRASREEILAQAKENEKKLKSMEAEMIQL 5076
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
E A ER + + Q D++AD A G +A+++ +++ + +L ++E
Sbjct: 5077 QEELAAAERAK-----RQAQQERDELADEIANSSGKGALALEEKRRLEALIALLEEELEE 5241
Query: 370 AARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERD 429
E + + + +ID L + E R L K EL +E +
Sbjct: 5242 EQGNTELINDRLKKANLQIDQINTDLNLERSHAQKNENARQQLERQNK--ELKAKLQEME 5415
Query: 430 DILRSL--GEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNL-------------- 473
++S IAAL +K+ L Q ++ E +A +KQV A + L
Sbjct: 5416 SAVKSKYKASIAALEAKIAQLEEQLDNETKERQAASKQVRRAEKKLKDVLLQVEDERRNA 5595
Query: 474 -QTKTNRAVANSRPAKAAVHLEGKIEQAQR 502
Q K A++R + LE E+AQR
Sbjct: 5596 EQFKDQADKASTRLKQLKRQLEEAEEEAQR 5685
>ref|NM_013194.1| Rattus norvegicus Myosin, heavy polypeptide 9, non-muscle (Myh9),
mRNA
Length = 6060
Score = 49.7 bits (117), Expect = 0.002
Identities = 84/390 (21%), Positives = 160/390 (40%), Gaps = 41/390 (10%)
Frame = +1
Query: 154 MEDLVTYTKNLGPGMTKMAKM---IDERQQEL-THQEHRVMLVNSMNTVKELLPVLISAM 209
MEDL++ ++G + ++ K ++++ +E+ T E + + K L V + AM
Sbjct: 4537 MEDLMSSKDDVGKSVHELEKSNRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAM 4716
Query: 210 KI-FVTTKNSKNQGIEEALKNRNFTVEKMSAEINE----------IIRVLQLTSWDEDAW 258
K F +++ EE K V +M AE+ + + L++ D +A
Sbjct: 4717 KAQFERDLQGRDEQSEEKKKQLVRQVREMEAELEDERKQRSIAMAARKKLEMDLKDLEAH 4896
Query: 259 ---ASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDA------GEQAIRQILDEAGKV 309
A+K+ E + L + +++ + D AS + E+ ++ + E ++
Sbjct: 4897 IDTANKNREEAIKQLRKLQAQMKDCMRDVDDTRASREEILAQAKENEKKLKSMEAEMIQL 5076
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
E A ER + + Q D++AD A G +A+++ +++ + +L ++E
Sbjct: 5077 QEELAAAERAK-----RQAQQERDELADEIANSSGKGALALEEKRRLEALIALLEEELEE 5241
Query: 370 AARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERD 429
E + + + +ID L + E R L K EL +E +
Sbjct: 5242 EQGNTELINDRLKKANLQIDQINTDLNLERSHAQKNENARQQLERQNK--ELKAKLQEME 5415
Query: 430 DILRSL--GEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNL-------------- 473
++S IAAL +K+ L Q ++ E +A +KQV A + L
Sbjct: 5416 SAVKSKYKASIAALEAKIAQLEEQLDNETKERQAASKQVRRAEKKLKDVLLQVEDERRNA 5595
Query: 474 -QTKTNRAVANSRPAKAAVHLEGKIEQAQR 502
Q K A++R + LE E+AQR
Sbjct: 5596 EQFKDQADKASTRLKQLKRQLEEAEEEAQR 5685
>gb|BC006075.1|BC006075 Mus musculus, Similar to Myosin, heavy polypeptide 9, non-muscle,
clone IMAGE:3593519, mRNA, partial cds
Length = 1953
Score = 49.3 bits (116), Expect = 0.002
Identities = 84/390 (21%), Positives = 158/390 (39%), Gaps = 41/390 (10%)
Frame = +1
Query: 154 MEDLVTYTKNLGPGMTKMAKM---IDERQQEL-THQEHRVMLVNSMNTVKELLPVLISAM 209
MEDL++ ++G + ++ K ++++ +E+ T E + + K L V + AM
Sbjct: 223 MEDLMSSKDDVGKSVHELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAM 402
Query: 210 KI-FVTTKNSKNQGIEEALKNRNFTVEKMSAEINE----------IIRVLQLTSWDEDAW 258
K F +++ EE K V +M AE+ + + L++ D +A
Sbjct: 403 KAQFERDLQGRDEQSEEKKKQLVRQVREMEAELEDERKQRSMAMAARKKLEMDLKDLEAH 582
Query: 259 ---ASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDA------GEQAIRQILDEAGKV 309
A+K+ E + L + +++ L D AS + E+ ++ + E ++
Sbjct: 583 IDTANKNREEAIKQLRKLQAQMKDCMRELDDTRASREEILAQAKENEKKLKSMEAEMIQL 762
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
E A ER + + Q D++AD A G +A+++ +++ + L ++E
Sbjct: 763 QEELAAAERAK-----RQAQQERDELADEIANSSGKGALALEEKRRLEARIAQLEEELEE 927
Query: 370 AARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERD 429
E + + + +ID L + E R L K EL +E +
Sbjct: 928 EQGNTELINDRLKKANLQIDQINTDLNLERSHAQKNENARQQLERQNK--ELKAKLQEME 1101
Query: 430 DILRSL--GEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNL-------------- 473
++S IAAL +K+ L Q ++ E +A +KQV + L
Sbjct: 1102SAVKSKYKASIAALEAKIAQLEEQLDNETKERQAASKQVRRTEKKLKDVLLQVEDERRNA 1281
Query: 474 -QTKTNRAVANSRPAKAAVHLEGKIEQAQR 502
Q K A++R + LE E+AQR
Sbjct: 1282EQFKDQADKASTRLKQLKRQLEEAEEEAQR 1371
>emb|Z32677.1|SSMLC36 Streptococcus sp. group C (C36) MLC36 gene for plasminogen binding
protein
Length = 1362
Score = 46.6 bits (109), Expect = 0.014
Identities = 84/391 (21%), Positives = 159/391 (40%), Gaps = 19/391 (4%)
Frame = +1
Query: 216 KNSKNQGIEEALKNRNFTVEKMSAEINEI------IRVLQLTSWDEDAWASKDTEAMKRA 269
K +NQ +EE LKN+ F++ + INE+ + + + E + EA ++
Sbjct: 292 KLKENQDLEEKLKNKEFSLGEALRYINELDLKLGQLNIDNIDLKHELEQEKQKAEAYRQT 471
Query: 270 LASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLG 329
L + +KL + K DA Q++R+ LD + + A K+ +
Sbjct: 472 LEAEKAKLEEEK--------QISDASRQSLRRDLDASRE-----AKKQLEAEYQKLEEEK 612
Query: 330 QMTDQVADLRARGQGASPVAMQKAQQVSQGLD----VLTAKVENAARKLEAMTNSKQSIA 385
Q++D R AS A ++ + Q L+ + A ++ R L+A +K
Sbjct: 613 QISDASRQSLRRDLDASREAKKQLEAEYQKLEEEKQISDASRQSLRRDLDASREAK---- 780
Query: 386 KKIDAAQNWLADPN----GGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAAL 441
K+++A L + N +G + A EA+K E K+ ++ L ++
Sbjct: 781 KQLEAEHQKLEEQNKISEASRKGLRRDLDASREAKKQVE-----KDLANLTAELDKVKE- 942
Query: 442 TSKLGDLRRQG-KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQA 500
++ D R+G + D +R KQV AL+ ANS+ A A L ++E++
Sbjct: 943 EKQISDASRKGLRRDLDASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEES 1092
Query: 501 QRWIDNPTVDDRGVGQAAIRG----LVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXX 556
++ + + + +A + L + LA + G K
Sbjct: 1093KKLTEKEKAELQAKLEAEAKALKEKLAKQAEELAKLRAG--------KASDSQTPDAKPG 1248
Query: 557 XXXXRGEGESPQARALASQLQDSLKDLKAQM 587
G+G++PQA +Q ++ +K+ K Q+
Sbjct: 1249NKVVPGKGQAPQAGTKPNQNKEPMKETKRQL 1341
>gb|U87265.1|BTU87265 Bos taurus non-muscle myosin heavy chain mRNA, partial cds
Length = 1958
Score = 46.6 bits (109), Expect = 0.014
Identities = 83/390 (21%), Positives = 157/390 (39%), Gaps = 41/390 (10%)
Frame = +1
Query: 154 MEDLVTYTKNLGPGMTKMAKM---IDERQQEL-THQEHRVMLVNSMNTVKELLPVLISAM 209
MEDL++ ++G + ++ K ++++ +E+ T E + + K L V + AM
Sbjct: 496 MEDLMSSKDDVGKSVHELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAM 675
Query: 210 KI-FVTTKNSKNQGIEEALKNRNFTVEKMSAEINE----------IIRVLQLTSWDEDAW 258
K F +++ EE K V +M AE+ + + L++ D +A
Sbjct: 676 KAQFERDLQGRDEQSEEKKKQLVKQVREMEAELEDERKQRSIAVAARKKLEMDLKDLEAH 855
Query: 259 ---ASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDA------GEQAIRQILDEAGKV 309
A+K+ + + L + +++ L D AS + E+ ++ + E ++
Sbjct: 856 IDSANKNRDEAIKQLRKVQAQMKDYMRELDDTRASREEILAQSKENEKKLKSMEAEMIQL 1035
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
E A ER + + Q D++AD A G +A+++ +++ + L ++E
Sbjct: 1036QEELAAAERAK-----RQAQQERDELADEIANSSGKGALALEEKRRLEARIAQLEEELEE 1200
Query: 370 AARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERD 429
E + + + +ID L + E R L K EL +E +
Sbjct: 1201EQGNTELVNDRLKKANLQIDQLNTDLNLERSHTQKNENARQQLERQNK--ELKVKLQEME 1374
Query: 430 DILRSL--GEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNL-------------- 473
++S IAAL +K+ L Q ++ E +A KQV + L
Sbjct: 1375GTVKSKFKASIAALEAKIAQLEEQLDNETKERQAACKQVRRTEKKLKDVLLQVDDERRNA 1554
Query: 474 -QTKTNRAVANSRPAKAAVHLEGKIEQAQR 502
Q K A++R + LE E+AQR
Sbjct: 1555EQYKDQADKASTRLKQLKRQLEEAEEEAQR 1644
>emb|X62467.1|SSPFCRV S.sp (valente) fcrV gene
Length = 2716
Score = 45.8 bits (107), Expect = 0.024
Identities = 113/583 (19%), Positives = 219/583 (37%), Gaps = 35/583 (6%)
Frame = +1
Query: 263 TEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEA--GKVGELCAGKERRE 320
T ++ AL+ + + L + N A EQA+++++D+ + AG R+
Sbjct: 283 TASVAVALSVLGAGLASQTEVKAEENERLRQAKEQALQEVIDQMPYDHLKNTLAGAFRKN 462
Query: 321 -----------------ILGTCKMLGQMTDQVADLRARGQGASPV----------AMQKA 353
IL K Q ++ +L++ G A +K
Sbjct: 463 QENERDLKDLNDALNNTILENIKSSNQHKKEIGELKSANGGLKTALDDMADTLNQASRKV 642
Query: 354 QQVSQGLDVLTAKVENAARK-LEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGAL 412
++S L A+ E AA+K L+A+ N + IAK LA+ N G + E I G +
Sbjct: 643 NELSAQNKALQAEAEAAAQKALDALNNKNEQIAK--------LANDNDGLK--EAIEGYV 792
Query: 413 AEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQN 472
++ + + ++ ++ + ++ A +++ DL+ Q S E L + A L+N
Sbjct: 793 DTIQQASR--EVSAKQQELAAAQLQLEAKNTEIEDLKHQDNMKSEEIAKLESE-AKMLEN 963
Query: 473 LQTKTNRAVANSRPAKAAVHLE-GKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLAN 531
L R + + A + + K+E + ++N L+ G R
Sbjct: 964 LIGSGKRELGDLEAKLADANAQKAKLESEAKMLEN---------------LIGSGKRELG 1098
Query: 532 VMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAM 591
DL AK + E E+ L + + DL+A++ EA
Sbjct: 1099--------DLEAKL-------ADANAQKAKLESEAKMLENLIGSGKREIADLQAKLDEAN 1233
Query: 592 TQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLXXXXXXXXXXX 651
+ + S+ T +LL + + ++ D AAN +N
Sbjct: 1234ADKAK-LESEATILERLLE---SGKRELAEQQAKLD--AANADN---------AKLTEDK 1368
Query: 652 XXNKSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTG 711
++++ +G++ + +RE QV ++ +T
Sbjct: 1369QISEASRQGLRRDLNASREAKKQVEK---------------------------DLANLTA 1467
Query: 712 LVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIA-RRANRILLVAKRE 770
+D+ + K + DAS + +++DLD + A ++ + A + A + N+ L +K+
Sbjct: 1468ELDKVKEDKQISDASRQGLRRDLDASREAKKQVEKALEEANSKLAALEKLNKELEESKKL 1647
Query: 771 VENSE---DPKFREAVKAASDELSKTISPMVMDAKAVAGNISD 810
E + K KA ++L+K + AK AG SD
Sbjct: 1648TEKEKAELQAKLEAEAKALKEKLAKQAEEL---AKLRAGKASD 1767
>emb|Z32678.1|SSMLG72 Streptococcus sp. group G (G72) MLG72 gene for plasminogen binding
protein
Length = 1416
Score = 45.4 bits (106), Expect = 0.031
Identities = 88/411 (21%), Positives = 167/411 (40%), Gaps = 14/411 (3%)
Frame = +1
Query: 191 LVNSMNTVKELLPVLISAMKIF---VTTKNSKNQGIEEALKNRNFTVEKMSAEINEI-IR 246
LV M V + L A ++ + NQ +EE LK++ F + + INE+ ++
Sbjct: 262 LVKKMEVVNDSLQATERANELLENKLKENQDLNQDLEEKLKDKEFYLGETLRYINELDLK 441
Query: 247 VLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEA 306
+ QL + D + E K A D + +A+ + DA Q++R+ LD +
Sbjct: 442 LGQLNIDNIDLKHELEQEKQK---AEADRQTLEAEKAKLEEEKQISDASRQSLRRDLDAS 612
Query: 307 GKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAK 366
+ A K+ + Q++D R AS A ++ + Q L+ K
Sbjct: 613 RE-----AKKQLEAEYQKLEEEKQISDASRQSLRRDLDASREAKKQLEAEYQKLEEQN-K 774
Query: 367 VENAARK-LEAMTNSKQSIAKKIDAAQNWLADPN----GGPEGEEQIRGALAEARKIAEL 421
+ A+RK L ++ + K+++A L + N +G + A EA+K E
Sbjct: 775 ISEASRKGLRRDLDASREAKKQLEAEHQKLEEQNKISEASRKGLRRDLDASREAKKQVE- 951
Query: 422 CDDPKERDDILRSLGEIAALTSKLGDLRRQG-KGDSPEARALAKQVATALQNLQTKTNRA 480
K+ ++ L ++ ++ D R+G + D +R KQV AL+
Sbjct: 952 ----KDLANLTAELDKVKE-EKQISDTSRKGLRRDLDASREAKKQVEKALEE-------- 1092
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGL----VAEGHRLANVMMGP 536
ANS+ A A L ++E++++ + + + +A + L + LA + G
Sbjct: 1093-ANSKLA-ALEKLNKELEESKKLTEKEKAELQAKLEAEAKALKEKLAKQAEELAKLRAGT 1266
Query: 537 YRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQM 587
+ G+G++PQA +Q ++ +K+ K Q+
Sbjct: 1267ASDSQTPEA--------TPGNKVVPGKGQAPQAGTKPNQNKEPMKETKRQL 1395
>emb|X80168.1|SPEMM3G S.pyogenes emm3 gene
Length = 1746
Score = 45.4 bits (106), Expect = 0.031
Identities = 110/569 (19%), Positives = 218/569 (37%), Gaps = 29/569 (5%)
Frame = +1
Query: 76 PAFIKVENACTKLVQAAQMLQS------DPYSVPARDYLIDGSRGILSGTSD----LLLT 125
P +K++N L+ L + YS A + L G +D LL
Sbjct: 151 PRHVKLKNEIENLLDQVTQLYNKHNSNYQQYSAQAGRLDLRQKAEYLKGLNDWAERLLQE 330
Query: 126 FDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQE---- 181
+ +V+K++ +V +DL K L + K K + ++
Sbjct: 331 LNGEDVKKVL------------GKVAFEKDDLEKEVKELKEKIDKKEKEYQDLDKDFDLA 474
Query: 182 -----LTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEK 236
L+ + H+ L V E + + T K +++ + +N +
Sbjct: 475 KQGYVLSDKRHQQELEEKEKKVTEATAKVGQISEELETVKQKVESTMQDLTEKQN----R 642
Query: 237 MSAEINEIIRVLQLTSWDEDAWA---SKDTEAMKRALASIDSKLNQAKGWLRDPNASPGD 293
+S E+ Q D + A + D + ++ +A +++KL +AK
Sbjct: 643 VSQLEQELATTKQNAKEDFELAALANAADKQKLEAKIADLETKLKEAKEDFELAALGHQH 822
Query: 294 AGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKA 353
A + ++ ++ ++ +L +E+++IL + G D A +A+ + + KA
Sbjct: 823 AHNEYQAKLAEKDDQIKQL---EEQKQILDASRK-GTARDLEAVRQAKKATEAELNNLKA 990
Query: 354 Q--QVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGA 411
+ +V++ +L A + AR LEA+ +K + + + +G + A
Sbjct: 991 ELAKVTEQKQILDASRKGTARDLEAVRQAKAQVEAALKQLEEQNRISEASRKGLRRDLDA 1170
Query: 412 LAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG-KGDSPEARALAKQVATAL 470
EA+K E K+ ++ L ++ ++ D RQG + D +R KQV AL
Sbjct: 1171SREAKKQVE-----KDLANLTAELDKVKE-EKQISDASRQGLRRDLDASREAKKQVEKAL 1332
Query: 471 QNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGL----VAEG 526
+ ANS+ A A L ++E++++ + + + +A R L +
Sbjct: 1333EE---------ANSKLA-ALEKLNKELEESKKLTEKEKAELQAKLEAEARALKEQLAKQA 1482
Query: 527 HRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQ 586
LA + G K G+G++PQA +Q + +K+ K Q
Sbjct: 1483EELAKLRAG--------KASDSQIPDTKPGNKAVPGKGQAPQAGTKPNQNKAPMKETKRQ 1638
Query: 587 MQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
+ T E ++ F T + ++A A A
Sbjct: 1639LPS--TGETANPFF-TAAALTVMATAGVA 1716
>ref|NM_017240.1| Rattus norvegicus myosin heavy chain, cardiac muscle, fetal (Myh7),
mRNA
Length = 5925
Score = 45.4 bits (106), Expect = 0.031
Identities = 80/385 (20%), Positives = 152/385 (38%), Gaps = 47/385 (12%)
Frame = +2
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 4778 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 4951
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 4952 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 5128
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 5129 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 5308
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R A +A++ ++ Q L+ ++EN
Sbjct: 5309 EEL--KKEQDTSAHLERMKNNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 5482
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 5483 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 5662
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDS-----PE 458
EEQ L++ RK+ D+ +ER DI S ++ L +K D+ +G + P
Sbjct: 5663 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGAKGLNEE*ILCYPT 5836
Query: 459 ARALAK--QVATALQNLQTKTNRAV 481
R K + Q+L+ K N+A+
Sbjct: 5837 LRMPVKP*DLEPLKQHLRQKHNKAI 5911
>emb|X15939.1|RNMHCB Rat mRNA for beta cardiac myosin heavy chain
Length = 5925
Score = 45.4 bits (106), Expect = 0.031
Identities = 80/385 (20%), Positives = 152/385 (38%), Gaps = 47/385 (12%)
Frame = +2
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 4778 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 4951
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 4952 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 5128
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 5129 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 5308
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R A +A++ ++ Q L+ ++EN
Sbjct: 5309 EEL--KKEQDTSAHLERMKNNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 5482
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 5483 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 5662
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDS-----PE 458
EEQ L++ RK+ D+ +ER DI S ++ L +K D+ +G + P
Sbjct: 5663 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGAKGLNEE*ILCYPT 5836
Query: 459 ARALAK--QVATALQNLQTKTNRAV 481
R K + Q+L+ K N+A+
Sbjct: 5837 LRMPVKP*DLEPLKQHLRQKHNKAI 5911
>gb|M18269.1|STR12M S.pyogenes surface protein M type 12 (emm12) gene, 5' end
Length = 2972
Score = 45.1 bits (105), Expect = 0.041
Identities = 105/498 (21%), Positives = 211/498 (42%), Gaps = 9/498 (1%)
Frame = +2
Query: 124 LTFDEAEVR-KIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQEL 182
L D A+++ KI + K + E V ++ ++L K++ G A + +QE+
Sbjct: 1628 LGIDNADLKAKITELEKSVEEKNDVLSQIK--KELEEAEKDIQFGREVHAADLLRHKQEI 1801
Query: 183 THQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEIN 242
+E+ + +N EL P+ K+ T +N + + + + V K +A+ +
Sbjct: 1802 AEKENVISKLNG-----ELQPL---KQKVDETDRNLQQEKQKVLSLEQQLAVTKENAKKD 1957
Query: 243 EIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQI 302
+ L D++ A +A ++SKL AK A + ++
Sbjct: 1958 FELAALGHQLADKEYNAK---------IAELESKLADAKKDFELAALGHQHAHNEYQAKL 2110
Query: 303 LDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQ--QVSQGL 360
++ G++ +L +E+++IL + G D A +A+ + + KA+ +V++
Sbjct: 2111 AEKDGQIKQL---EEQKQILDASRK-GTARDLEAVRQAKKATEAELNNLKAELAKVTEQK 2278
Query: 361 DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQ-IRGALAEARKIA 419
+L A + AR LEA+ SK+ ++++AA L + N E + +R L +R+
Sbjct: 2279 QILDASRKGTARDLEAVRKSKK---QQVEAALKQLEEQNKISEASRKGLRRDLDTSREAK 2449
Query: 420 ELCDDPKERDDILRSLGEIAALTSKLGDLRRQG-KGDSPEARALAKQVATALQNLQTKTN 478
+ + K+ ++ L ++ ++ D RQG + D +R KQV AL+
Sbjct: 2450 KQVE--KDLANLTAELDKVKE-EKQISDASRQGLRRDLDASREAKKQVEKALEE------ 2602
Query: 479 RAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGL----VAEGHRLANVMM 534
ANS+ A A L +E++++ + + + +A + L + LA +
Sbjct: 2603 ---ANSKLA-ALEKLNKDLEESKKLTEKEKAELQAKLEAEAKALKEQLAKQAEELAKLRA 2770
Query: 535 GPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQE 594
G K G+G++PQA +Q + +K+ K Q+ T E
Sbjct: 2771 G--------KASDSQTPDAKPGNKAVPGKGQAPQAGTKPNQNKAPMKETKRQLPS--TGE 2920
Query: 595 VSDVFSDTTTPIKLLAVA 612
++ F T + ++A A
Sbjct: 2921 TANPFF-TAAALTVMAAA 2971
Score = 38.5 bits (88), Expect = 3.8
Identities = 38/160 (23%), Positives = 73/160 (44%), Gaps = 4/160 (2%)
Frame = +2
Query: 655 KSTVEGIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVD 714
KS + ++A++K E ++ A+R LR + + K Q ++ +T +D
Sbjct: 2333 KSKKQQVEAALKQLEEQN-KISEASRKGLRRDLDTS-----REAKKQVEKDLANLTAELD 2494
Query: 715 EAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIA-RRANRILLVAKREVEN 773
+ + K + DAS + +++DLD + A ++ + A + A + N+ L +K+ E
Sbjct: 2495 KVKEEKQISDASRQGLRRDLDASREAKKQVEKALEEANSKLAALEKLNKDLEESKKLTEK 2674
Query: 774 SE---DPKFREAVKAASDELSKTISPMVMDAKAVAGNISD 810
+ K KA ++L+K + AK AG SD
Sbjct: 2675 EKAELQAKLEAEAKALKEQLAKQAEEL---AKLRAGKASD 2785
>emb|X78484.1|SPFCRA78 S.pyogenes (strain M8-4025) FcrA8 gene for immunoglobulin-binding
protein
Length = 1751
Score = 45.1 bits (105), Expect = 0.041
Identities = 65/276 (23%), Positives = 121/276 (43%), Gaps = 14/276 (5%)
Frame = +3
Query: 219 KNQGIEEALKNRNFTVEKM---SAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDS 275
KNQ EAL N+N + K+ +A++ E I T + AS++ A ++ LA+ S
Sbjct: 615 KNQQALEALNNKNEQIAKLTNENAQLKEAIEGYVQTIQN----ASREMAAKQQELAAAKS 782
Query: 276 KLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQV 335
+L +AK +A A++Q +A K E+ K + E+ +LG ++
Sbjct: 783 QL-EAK-----------NAEIDALKQ--QDASKTEEI--AKLQSEVATLENLLGSAKREL 914
Query: 336 ADLRARGQGASPVAMQKAQQVS----------QGLDVLTAKVENAARKLEAMTNSKQSIA 385
DL+A+ A+ + QV+ + L L AK++ A + E + + ++
Sbjct: 915 TDLQAKLDTATAEKAKLESQVTTLENLLGSAKRELTDLQAKLDAANAEKEKLQSQAAALE 1094
Query: 386 KKIDAAQNWLADPNGGPEGEEQIRGAL-AEARKIAELCDDPKERDDILRSLGEIAALTSK 444
K+++A + LAD Q + L AEA+ + ++ + + E+A L +
Sbjct: 1095KQLEATKKELADLQAKLAATNQEKEKLEAEAKAL---------KEQLAKQAEELAKLKAD 1247
Query: 445 LGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
+ P+ + K+V T +T TN+A
Sbjct: 1248-----KASGAQKPDTKPGNKEVPTRPSQTRTNTNKA 1340
>emb|X07273.1|MAMYOBH Hamster mRNA for cardiac beta-myosin heavy chain
Length = 3030
Score = 44.7 bits (104), Expect = 0.053
Identities = 80/385 (20%), Positives = 152/385 (38%), Gaps = 47/385 (12%)
Frame = +1
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 1885 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 2058
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 2059 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 2235
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 2236 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 2415
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R A +A++ ++ Q L+ ++EN
Sbjct: 2416 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 2589
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 2590 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 2769
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDS-----PE 458
EEQ L++ RK+ D+ +ER DI S ++ L +K D+ +G + P
Sbjct: 2770 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGAKGLNEE*ILCYPT 2943
Query: 459 ARALAK--QVATALQNLQTKTNRAV 481
R K + Q+L+ K N+A+
Sbjct: 2944 LRMPVKP*DLEPLKQHLRQKHNKAI 3018
>gb|AF324061.1|AF324061 Streptococcus pyogenes IgG Fc receptor (mrpST4547) and M ST4547
protein (emmST4547) genes, complete cds
Length = 3120
Score = 44.3 bits (103), Expect = 0.069
Identities = 59/266 (22%), Positives = 112/266 (41%), Gaps = 4/266 (1%)
Frame = +1
Query: 219 KNQGIEEALKNRNFTVEKM---SAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDS 275
KNQ EAL N+N + K+ +A++ E I T + AS++ A ++ LA+ S
Sbjct: 391 KNQQALEALNNKNEQIAKLTNENAQLKEAIEGYVQTIQN----ASREIAAKQQELAAAKS 558
Query: 276 KLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQV 335
+L + N E+ I ++ EA + L G +RE+ L T +
Sbjct: 559 QLEAKNAEIEALNQQDASKTEE-IAKLQSEAATLENL-LGSAKRELTDLQAKLDTATAEK 732
Query: 336 ADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWL 395
A L + + ++++ L AK++ A + E + + ++ K+++A + L
Sbjct: 733 AKLELQVTTLENLLGSAKRELTD----LQAKLDAANAEKEKLQSQAAALEKQLEATKKEL 900
Query: 396 ADPNGGPEGEEQIRGAL-AEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKG 454
AD Q + L AEA+ + ++ + + E+A L + +
Sbjct: 901 ADLQAKLAATNQEKEKLEAEAKAL---------KEQLAKQAEELAKLKAD-----KASGA 1038
Query: 455 DSPEARALAKQVATALQNLQTKTNRA 480
P+ + K+V T +T TN+A
Sbjct: 1039QKPDTKPGNKEVPTRPSQTRTNTNKA 1116
>emb|X60098.1|SSGEMM Streptococcus sp. (group G) emm gene for M protein
Length = 1356
Score = 43.9 bits (102), Expect = 0.091
Identities = 88/411 (21%), Positives = 165/411 (39%), Gaps = 14/411 (3%)
Frame = +1
Query: 219 KNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLN 278
+N+ ++E ++ + + N +++ +++ + +A +RA +++KL
Sbjct: 244 ENEQLDELVRKEVAEYNSLLDKHNSLVKKMEVVN--------DSLQATERANELLENKLK 399
Query: 279 QAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADL 338
+ Q + Q L+E K E G+ R I LGQ+ DL
Sbjct: 400 E----------------NQDLNQDLEEKLKDKEFYLGETLRYINELDLKLGQLNIDNFDL 531
Query: 339 RARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDA---AQNWL 395
+ + QKA+ Q L+ AK+E + +A S+QS+ + +DA A+ L
Sbjct: 532 KHELEQEK----QKAEADRQTLEAEKAKLEEEKQISDA---SRQSLRRDLDASREAKKQL 690
Query: 396 ADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSK------LGDLR 449
+ E ++QI A + + +L + + + + L + A K + D
Sbjct: 691 EADHQKLEEQKQISEASRKGLR-RDLDASREAKKQVEKDLANLTAELDKVKEEKQISDAS 867
Query: 450 RQG-KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPT 508
R+G + D +R KQV AL+ ANS+ A A L ++E++++ +
Sbjct: 868 RKGLRRDLDASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKKLTEKEK 1017
Query: 509 VDDRG----VGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEG 564
+ + V +A L + LA + G K G+G
Sbjct: 1018AELQAKLEAVAKALKEKLAKQAEELAKLRAG--------KASDSQTPEATPGNKVVPGKG 1173
Query: 565 ESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
++PQA +Q ++ +K+ K Q+ T E ++ F LAV ATA
Sbjct: 1174QAPQAGTKPNQNKEPMKETKRQLPS--TGEATNPFFTAAA----LAVMATA 1308
>emb|X81475.1|MHLMP M.hominis lmp1 and lmp2 genes
Length = 7196
Score = 43.9 bits (102), Expect = 0.091
Identities = 122/648 (18%), Positives = 228/648 (34%), Gaps = 42/648 (6%)
Frame = +3
Query: 169 TKMAKMIDER---QQELTHQEHRVMLVN---------SMNTVKELLPVLISAM-KIFVTT 215
T AK+ D+ QQ T E V N SM + K L ++ + K T
Sbjct: 2208 TLSAKLTDKDNTIQQAKTELEKEVQKANQAIKSNNTASMQSAKSSLDAKVAEITKKLETF 2387
Query: 216 KNSKNQGIEEALKNRN-----FTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRAL 270
K E + RN K + +E+I QLTS D+ S + K +
Sbjct: 2388 NKDKEAKFNELKQTRNQIQEFINTNKNNPNYSELIS--QLTS-KRDSKNSVTDSSNKSDI 2558
Query: 271 ASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQ 330
S +++L QA + + Q+ + L A ++ T +
Sbjct: 2559 ESANTELKQALAKANADKVQADNLAKSIKEQLNNSVSNANTLSAKLTDKD--NTIQQA-- 2726
Query: 331 MTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDA 390
T+ +++ Q Q LD AKV +KLE K++ ++
Sbjct: 2727 KTELEKEVQKANQAIKSNNTASMQSAKSSLD---AKVAEITKKLETFNKDKEAKFNELKQ 2897
Query: 391 AQNWLAD---PNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGD 447
+N + + N ++ L R D + DI + E+ +K
Sbjct: 2898 TRNQIQEFINTNKNNPNYSELISQLTSKRDSKNSVTDSSNKSDIESANTELKQALAK--- 3068
Query: 448 LRRQGKGDSPEARALAKQVATALQNLQTKTNRAVA-----NSRPAKAAVHLEGKIEQAQR 502
D +A LAK + L N + N A ++ +A LE ++++A +
Sbjct: 3069 ----ANADKVQADNLAKSIKEQLNNSVSNANTLSAKLTDKDNTIQQAKTELEKEVQKANQ 3236
Query: 503 WIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRG 562
I + ++++ VAE + + +D AK + +
Sbjct: 3237 AIKSNNTASMQSAKSSLDAKVAE----ITKKLETFNKDKEAKFNELKQTRNQIQEFINTN 3404
Query: 563 EGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNR 622
+ +P L SQL S +D K + ++ + SD+ S T + LA A A N
Sbjct: 3405 K-NNPNYSELISQL-TSKRDSKNSVTDSSNK--SDIESANTELKQALAKANADKVQADNL 3572
Query: 623 EEVFDERAANFENHSGRLXXXXXXXXXXXXXNKSTVE------------GIQASVKTARE 670
+ E+ N +++ L K+ +E AS+++A+
Sbjct: 3573 AKSIKEQLNNSVSNANTLSAKLTDKDNTIQQAKTELEKEVQKANQAIKSNNTASMQSAKS 3752
Query: 671 LTPQVIS--AARILLRNPGNQAAYEHFETMKNQWID--NVEKMTGLVDEAIDTKSLLDAS 726
++ ++ N +A + + +NQ + N K E I + S
Sbjct: 3753 SLDAKVAEITKKLETFNKDKEAKFNELKQTRNQIQEFINTNKNNPNYSELISQLTSKRDS 3932
Query: 727 EEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+ ++ +K + AN + + +A A + +A+ + K ++ NS
Sbjct: 3933 KNSVTDSSNKSDIESANTELKQALAKANADKVQADNLAKSIKEQLNNS 4076
Score = 41.2 bits (95), Expect = 0.59
Identities = 85/451 (18%), Positives = 163/451 (35%), Gaps = 24/451 (5%)
Frame = +3
Query: 348 VAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLAD---PNGGPEG 404
VA + L AKV +KLE K++ ++ +N + + N
Sbjct: 885 VASNNTASMQSAKSSLDAKVAEITKKLETFNKDKEAKFNELKQTRNQIQEFINTNKNNPN 1064
Query: 405 EEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAK 464
++ L R D + DI + E+ +K D +A LAK
Sbjct: 1065 YSELISQLTSKRDSKNSVTDSSNKSDIESANTELKQALAK-------ANADKVQADNLAK 1223
Query: 465 QVATALQNLQTKTNRAVA-----NSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAI 519
+ L N + N A ++ +A LE ++++A + I + ++++
Sbjct: 1224 SIKEQLNNSVSNANTLSAKLTDKDNTIQQAKTELEKEVQKADQAIKSNNTASMQSAKSSL 1403
Query: 520 RGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDS 579
VAE + + +D AK + + + +P L SQL S
Sbjct: 1404 DAKVAE----ITKKLETFNKDKEAKFNELKQTRNQIQEFINTNK-NNPNYSELISQL-TS 1565
Query: 580 LKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGR 639
+D K + ++ + SD+ S T + LA A A N + E+ N +++
Sbjct: 1566 KRDSKNSVTDSSNK--SDIESANTELKQALAKANADKVQADNLAKSIKEQLNNSVSNANT 1739
Query: 640 LXXXXXXXXXXXXXNKSTVE------------GIQASVKTARE-LTPQVISAARIL-LRN 685
L K+ +E AS+++A+ L +V + L N
Sbjct: 1740 LSAKLTDKDNTIQQAKTELEKEVQKADQAIKSNNTASMQSAKS*LDAKVAEITKKLETFN 1919
Query: 686 PGNQAAYEHFETMKNQWID--NVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMAN 743
+A + + +NQ + N K E I + S+ ++ +K + AN
Sbjct: 1920 KDKEAKFNELKQTRNQIQEFINTNKNNPNYSELISQLTSKRDSKNSVTDSSNKSDIESAN 2099
Query: 744 IQPQMLVAGATSIARRANRILLVAKREVENS 774
+ + +A A + +A+ + K ++ NS
Sbjct: 2100 TELKQALAKANADKVQADNLAKSIKEQLNNS 2192
>gb|AE004844.1|AE004844 Pseudomonas aeruginosa PA01, section 405 of 529 of the complete
genome
Length = 17712
Score = 43.5 bits (101), Expect = 0.12
Identities = 49/206 (23%), Positives = 84/206 (39%), Gaps = 1/206 (0%)
Frame = +3
Query: 289 ASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPV 348
AS D G A+ + L + G +L +R Q +Q L R +G+ P+
Sbjct: 4371 ASDNDRG--ALLEKLTDTGLYSQLSKAAYQRA--------SQADEQRKQLEQRLEGSLPL 4520
Query: 349 AMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQI 408
A +Q GL+ A +A +L+ +Q ++++ Q W + + E
Sbjct: 4521 A----EQARAGLEA--ALESHAQARLQ-----EQQALQRLEGQQQWFTEEQRLLQSCEHA 4667
Query: 409 RGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVAT 468
+G LAEAR+ + +E L L + L +L L ++ + + R +Q A
Sbjct: 4668 QGQLAEARQAWDALATERETLQWLERLAPVRGLIERLKQLEQELRHSEQQQRQRTEQQAA 4847
Query: 469 ALQNLQ-TKTNRAVANSRPAKAAVHL 493
+ LQ + A R A+A HL
Sbjct: 4848 GTERLQGLQARLQEARERQAQADNHL 4925
>gb|M20374.1|STRSMP5A S.pyogenes smp5 gene encoding serotype 5 M protein, complete cds
Length = 1547
Score = 43.5 bits (101), Expect = 0.12
Identities = 83/409 (20%), Positives = 174/409 (42%), Gaps = 8/409 (1%)
Frame = +1
Query: 215 TKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASID 274
T +++ + +E ++N + E + + ++ + L T E A ++++ ++AL +
Sbjct: 391 TLSTQKETLEREVQNTQYNNETLKIKNGDLTKELNKTR-QELANKQQESKENEKALNELL 567
Query: 275 SKLNQAKGWLRDPNASPGDAGEQ--AIRQILDEAGKVGELCAGKERREILGTCKMLGQMT 332
K ++D A + E +++ILDE K ++ +E +E +GT K + +
Sbjct: 568 EKT------VKDKIAKEQENKETIGTLKKILDETVK-DKIAKEQENKETIGTLKKI--LD 720
Query: 333 DQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARK-LEAMTNSKQSIAKKIDAA 391
+ V D A+ Q + Q++++ + K+ +A+RK L ++ + K+++A
Sbjct: 721 ETVKDKLAKEQKSKQNIGALKQELAKKDEA--NKISDASRKGLRRDLDASREAKKQLEAE 894
Query: 392 QNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQ 451
L EEQ + + A + + D +E L + + +K+ + R+
Sbjct: 895 HQKL---------EEQNKISEASRKGLRRDLDASREAKKQLEAEQQKLEEQNKISEASRK 1047
Query: 452 G-KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVD 510
G + D +R KQV AL+ ANS+ A A L ++E++++ + +
Sbjct: 1048GLRRDLDASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKKLTEKEKAE 1197
Query: 511 DRGVGQAAIRGL----VAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGES 566
+ +A + L + LA + G K G+G++
Sbjct: 1198LQAKLEAEAKALKEQLAKQAEELAKLRAG--------KASDSQTPDTKPGNKAVPGKGQA 1353
Query: 567 PQARALASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
PQA +Q + +K+ K Q+ T E ++ F T + ++A A A
Sbjct: 1354PQAGTKPNQNKAPMKETKRQLPS--TGETANPFF-TAAALTVMATAGVA 1491
>gb|S75411.1|S75411 vir regulon: mry15=Mry homolog...scpA15=ScpA15 [Streptococcus
pyogenes, type M15, opacity factor-positive serotype,
Genomic, 5 genes, 5299 nt]
Length = 5299
Score = 43.1 bits (100), Expect = 0.15
Identities = 58/266 (21%), Positives = 112/266 (41%), Gaps = 4/266 (1%)
Frame = +3
Query: 219 KNQGIEEALKNRNFTVEKM---SAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDS 275
KNQ EAL N+N + K+ +A++ E I T + AS++ A ++ LA+ S
Sbjct: 1203 KNQQALEALNNKNEQIAKLTNENAQLKEAIEGYAQTIQN----ASREIAAKQQELAAAKS 1370
Query: 276 KLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQV 335
+L + N E+ I ++ EA + L G +RE+ L T +
Sbjct: 1371 QLEAKNAEIEALNQQDASKTEE-IAKLQSEAATLENL-LGSAKRELTDLQAKLDTATAEK 1544
Query: 336 ADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWL 395
A L ++ + ++++ L AK++ A + + + ++ K+++A + L
Sbjct: 1545 AKLESQVTTLENLLGSAKRELTD----LQAKLDAANAEKAKLQSQAAALEKQLEATKKEL 1712
Query: 396 ADPNGGPEGEEQIRGAL-AEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKG 454
AD Q + L AEA+ + ++ + + E+A L + +
Sbjct: 1713 ADLQAKLAATNQEKEKLEAEAKAL---------KEQLAKQAEELAKLKAD-----KASGA 1850
Query: 455 DSPEARALAKQVATALQNLQTKTNRA 480
P+ + K+V T +T TN+A
Sbjct: 1851 QKPDTKPGNKEVPTRPSQTRTNTNKA 1928
>gb|U02480.1|SPU02480 Streptococcus pyogenes NCTC8193 antiphagocytic M5.8193 protein
(emm5.8193) gene, partial cds, and IgG-binding protein
Enn5.8193 gene, complete cds
Length = 2633
Score = 43.1 bits (100), Expect = 0.15
Identities = 81/409 (19%), Positives = 174/409 (41%), Gaps = 6/409 (1%)
Frame = +1
Query: 213 VTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALAS 272
+T++ +++ + LK + T +S + + R +Q T ++ + K+ + K
Sbjct: 259 LTSEKKEHEAENDKLKQQRDT---LSTQKETLEREVQNTQYNNETLKIKNGDLTK----- 414
Query: 273 IDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMT 332
+LN+ + L + + E+A+ ++L++ K ++ +E +E +GT K + +
Sbjct: 415 ---ELNKTRQELANKQQESKE-NEKALNELLEKTVK-DKIAKEQENKETIGTLKKI--LD 573
Query: 333 DQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARK-LEAMTNSKQSIAKKIDAA 391
+ V D A+ Q + Q++++ + K+ +A+RK L ++ + K+++A
Sbjct: 574 ETVKDKLAKEQKSKQNIGALKQELAKKDEA--NKISDASRKGLRRDLDASREAKKQLEAE 747
Query: 392 QNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQ 451
L EEQ + + A + + D +E L + + +K+ + R+
Sbjct: 748 HQKL---------EEQNKISEASRKGLRRDLDASREAKKQLEAEHQKLEEQNKISEASRK 900
Query: 452 G-KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVD 510
G + D +R KQV AL+ ANS+ A A L ++E++++ + +
Sbjct: 901 GLRRDLDASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKKLTEKEKAE 1050
Query: 511 DRGVGQAAIRGL----VAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGES 566
+ +A + L + LA + G K G+G++
Sbjct: 1051LQAKLEAEAKALKEQLAKQAEELAKLRAG--------KASDSQTPDTKPGNKAVPGKGQA 1206
Query: 567 PQARALASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
PQA +Q + +K+ K Q+ T E ++ F T + ++A A A
Sbjct: 1207PQAGTKPNQNKAPMKETKRQLPS--TGETANPFF-TAAALTVMATAGVA 1344
>gb|J04669.1|TCSTROP Nematode muscle tropomyosin mRNA, complete cds
Length = 1503
Score = 43.1 bits (100), Expect = 0.15
Identities = 46/238 (19%), Positives = 99/238 (41%), Gaps = 5/238 (2%)
Frame = +2
Query: 364 TAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCD 423
TAK++ +K++AM K + + DAA EE++R + ++ E
Sbjct: 299 TAKMDAIKKKMQAMKIEKDNALDRADAA-------------EEKVRQITEKLERVEEELR 439
Query: 424 DPKER-----DDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTN 478
D +++ +D+ ++ ++AA TS+L + ++ + E AL +++ + L+
Sbjct: 440 DTQKKMMQTENDLDKAQEDLAAATSQLEEKEKKVQEAEAEVAALNRRMTLLEEELERAEE 619
Query: 479 RAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYR 538
R + + A H + E+ ++ ++N + D I + E LA Y
Sbjct: 620 RLKIATEKLEEATHNVDESERVRKVMENGSFQDEERAN-TIEAQLKEAQMLAEEADRKY- 793
Query: 539 QDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVS 596
++ K V GE + + + ++LK L+ ++A+ +E S
Sbjct: 794 DEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDS 967
>gb|AC084674.1|CBRG47I21 Caenorhabditis briggsae cosmid G47I21, complete sequence
Length = 43351
Score = 42.7 bits (99), Expect = 0.20
Identities = 60/311 (19%), Positives = 135/311 (43%), Gaps = 6/311 (1%)
Frame = +2
Query: 179 QQELTHQEHRVM-LVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKM 237
+Q L +E ++ L++ M+++++ ++ ++I + + NSK Q + ++LKN +E
Sbjct: 5924 KQSLEEKEAKIQALIDEMSSLQKSTDG-VAQLRIDLESANSKTQELTDSLKNSQDVIE-- 6094
Query: 238 SAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLR--DPNASPGDAG 295
E E+I L+ T+ S+ T +L ++ S+L +A+ L + S
Sbjct: 6095 --ENTEVILKLKNTAEASQTEVSQLTV----SLQTVTSQLEEARQRLEFSEFKISSLQTE 6256
Query: 296 EQAIRQ--ILDEAGKVGELCAGKERREILGTCKM-LGQMTDQVADLRARGQGASPVAMQK 352
+ +RQ +LD ++ +E E + ++ L + ++ +L A Q +
Sbjct: 6257 LEEVRQECLLDGESAEAKIKILEESAEDSQSIRIQLKEAETRIKELEAAKQALEEIGQDS 6436
Query: 353 AQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGAL 412
+ D K+E A R+++ + + ++ ++ D+ + EE + +
Sbjct: 6437 VTKNDDIRDQYQEKLEEAERQIQELQTALDTVKEETDSVS----------QREEVAQNKI 6586
Query: 413 AEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQN 472
E E+ E +++LRS EI + + K+ DL Q + ++ L++
Sbjct: 6587 NELEASIEVLGKAAETNEMLRS--EIDSASKKIQDLELQLDSAQKSSELSGSELEKKLES 6760
Query: 473 LQTKTNRAVAN 483
Q + +N
Sbjct: 6761 SQGAIHELKSN 6793
>gb|U39838.1|SPU39838 Streptococcus pyogenes M protein (emm19.1) gene, complete cds
Length = 1677
Score = 42.7 bits (99), Expect = 0.20
Identities = 96/545 (17%), Positives = 210/545 (37%), Gaps = 10/545 (1%)
Frame = +1
Query: 81 VENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKG 140
+E+ L Q L+S ++ ++ ++G L G + L + +A I +
Sbjct: 277 LESQKQALESQKQALESQKQALESQKQALEGRTQDLEGQTQDLESQKQAPESHIQALESQ 456
Query: 141 ILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVK- 199
+ + + +E+ + + K + + K + +++ L Q N+ T K
Sbjct: 457 TQDLESQTQALESQKQALESRKQ---ALEEQNKQLSTQKETLERQVQEAQHNNNELTEKL 627
Query: 200 -ELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAW 258
E L++ + TK + N+ +++ +K++ ++ I + ++L T D+ A
Sbjct: 628 DETQKKLVNKQQESEETKKTLNELLDKTVKDKLAKEQENQETIGTLKKILDETVKDKIAK 807
Query: 259 ASK---DTEAMKRAL-ASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVG---E 311
K D A+K+ L ++ K+ + + +D A + ++ + +A + G +
Sbjct: 808 EQKSKQDIGALKKILDETVKDKIAKEQKSKQDIGALKQELAKKEEHNKISDASRKGLRRD 987
Query: 312 LCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQ-QVSQGLDVLTAKVENA 370
L A +E ++ L + +++++ +G A ++A+ QV + L LTA++
Sbjct: 988 LDASREAKKQLEAEHQKLEEQNKISEASRKGLRRDLDASREAKKQVEKDLANLTAELNKV 1167
Query: 371 ARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDD 430
+ + S+Q + + +DA++ E ++Q+ AL EA
Sbjct: 1168KEEKQTSDASRQGLRRDLDASR----------EAKKQVEKALEEANS------------- 1278
Query: 431 ILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAA 490
L + L +L + ++ + + E +A + A AL+ K +A R KA+
Sbjct: 1279---KLAALEKLNKELEESKKLTEKEKAELQAKLEAEAKALKEQLAKQAEELAKLRAGKAS 1449
Query: 491 VHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVXX 550
D+ T D + +A
Sbjct: 1450--------------DSQTPDTKPGNKAV-------------------------------- 1491
Query: 551 XXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLA 610
G+G++PQA +Q + +K+ K Q+ T E ++ F T + ++A
Sbjct: 1492----------PGKGQAPQAGTKPNQNKAPMKETKRQLPS--TGEATNPFF-TAAALTVMA 1632
Query: 611 VAATA 615
A A
Sbjct: 1633TAGVA 1647
>dbj|AB016537.3|AB016537 Streptococcus pyogenes genes for ORF, Mga23, M23 and scpA23, complete
and partial cds
Length = 4791
Score = 42.7 bits (99), Expect = 0.20
Identities = 87/415 (20%), Positives = 165/415 (38%), Gaps = 17/415 (4%)
Frame = +2
Query: 218 SKNQGIEEALKNRNFTVE---KMSAEINEIIRVLQLTSWDE---DAWASKDTEAMKRALA 271
++ + +EE L N+N T++ + E E +R L L E + E KR
Sbjct: 3038 NEKKKLEEELANKNTTLDGALRAITEKEEKLRELDLALGKEHIDNIDLKHQLETEKREAE 3217
Query: 272 SIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGEL--CAGKERREILGTCKMLG 329
+ L K L + A+ + A+R I ++ K+ EL GKE + +
Sbjct: 3218 AQRQILENEKKKLEEELANKNTTLDGALRAITEKEEKLRELDLALGKEHIDNI------- 3376
Query: 330 QMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKID 389
+ Q+ + + + + +++ + + A + R L+A +K K+++
Sbjct: 3377 DLKHQLETEKREAEAQRQILENEKKKLEEQNKISEASRKGLRRDLDASREAK----KQLE 3544
Query: 390 AAQNWLADPN----GGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKL 445
A L + N +G + A EA+K E K+ ++ L ++ ++
Sbjct: 3545 AEHQKLEEQNKISEASRKGLRRDLDASREAKKQVE-----KDLANLTAELDKVKE-EKQI 3706
Query: 446 GDLRRQG-KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWI 504
D RQG + D +R KQV AL+ ANS+ A A L ++E++++
Sbjct: 3707 SDASRQGLRRDLDASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKKLT 3856
Query: 505 DNPTVDDRGVGQAAIRGL----VAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXX 560
+ + + +A + L + LA + G K
Sbjct: 3857 EKEKAELQAKLEAEAKALKEQLAKQAEELAKLRAG--------KASGSQTPDAKPGNKAV 4012
Query: 561 RGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
G+G++PQA A +Q + +K+ K Q+ T E ++ F T + ++A A A
Sbjct: 4013 PGKGQAPQAGAKPNQNKAPMKETKRQLPS--TGETANPFL-TAAALTVMATAGVA 4168
>ref|XM_033374.1| Homo sapiens myosin, heavy polypeptide 7, cardiac muscle, beta
(MYH7), mRNA
Length = 5999
Score = 42.4 bits (98), Expect = 0.26
Identities = 72/349 (20%), Positives = 138/349 (38%), Gaps = 40/349 (11%)
Frame = +3
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 4845 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 5018
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 5019 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 5195
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 5196 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 5375
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R A +A++ ++ Q L+ ++EN
Sbjct: 5376 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 5549
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 5550 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 5729
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG 452
EEQ L++ RK+ D+ +ER DI S ++ L +K D+ +G
Sbjct: 5730 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 5870
>gb|AE004993.1|AE004993 Halobacterium sp. NRC-1 section 24 of 170 of the complete genome
Length = 10286
Score = 42.4 bits (98), Expect = 0.26
Identities = 87/452 (19%), Positives = 176/452 (38%), Gaps = 39/452 (8%)
Frame = -2
Query: 110 DGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMT 169
+G ++ G ++ E R+II G+ E+ A+ + E+L + +G
Sbjct: 9421 EGYNVVMQGDVTGIINMTAGERREIIDEIAGVAEF--DAKKRDAFEELDVVEERIGEAEL 9248
Query: 170 K-------MAKMIDERQQELTHQEHRVMLVNSMNTVK----ELLPVLISAMKIFVTTKNS 218
K + ++ DER+ L +Q+ + K E +SA + + +
Sbjct: 9247 KIDEKRDRLDRLADERETALEYQDLQEEKQEYEGYAKAAELEETRADLSATRADIDEQER 9068
Query: 219 KNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLN 278
+ +G+ L R TV ++ A++ + ++ DE ++ E +K ++ ++ +
Sbjct: 9067 ELEGLTAELDERRDTVGRIEADLAALNAEIERKGEDEQLAIKREIEEIKGEVSRLEDTVA 8888
Query: 279 QAKGWLRDPNASPG-------------DAGEQAIRQI-LDEAGKVGELCAGKERREILGT 324
+ ++D +A DA E IR++ + +A E+ +ERR+ L
Sbjct: 8887 ACEDRVQDADAERREAVVEIDRKRERIDALETDIREVKVQKASVTAEI---QERRDELAD 8717
Query: 325 CKMLGQMTDQVADLRARGQGASPVAMQKAQQV----SQGLDVLTAKVENAARKL---EAM 377
+ + D D A++ A++ + D L + + + +L EA
Sbjct: 8716 IEAEIESVDTEFDELKAALADEKTALEDAKRERNDHQREQDRLLDEAKRRSEELADAEAD 8537
Query: 378 TNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKE-----RDDIL 432
++ ++DA + LAD ++ A +I ++ +D K+ ++D+
Sbjct: 8536 LEDARAELPEVDATLDELAD---------ELEKATRNREQIVDVVEDLKQEKRQRQEDLA 8384
Query: 433 RSLGEIAALTSKLGDLRRQG--KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAA 490
E++A + L Q GDS + K V T L + + + V +
Sbjct: 8383 AVEDELSAAQEEYARLEAQADQSGDS----SYGKAVTTVLNDDRDGVHGTVGQLGGVREQ 8216
Query: 491 VHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGL 522
+ R + N VDD GVGQ I L
Sbjct: 8215 YATACETAAGGR-LANVVVDDDGVGQRCIEYL 8123
>ref|NM_000257.1| Homo sapiens myosin, heavy polypeptide 7, cardiac muscle, beta
(MYH7), mRNA
Length = 6008
Score = 42.4 bits (98), Expect = 0.26
Identities = 72/349 (20%), Positives = 138/349 (38%), Gaps = 40/349 (11%)
Frame = +3
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 4854 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 5027
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 5028 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 5204
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 5205 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 5384
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R A +A++ ++ Q L+ ++EN
Sbjct: 5385 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 5558
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 5559 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 5738
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG 452
EEQ L++ RK+ D+ +ER DI S ++ L +K D+ +G
Sbjct: 5739 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 5879
>gb|M58018.1|HUMBMYH7CD Homo sapiens beta-myosin heavy chain (MYH7) mRNA, complete cds
Length = 6008
Score = 42.4 bits (98), Expect = 0.26
Identities = 72/349 (20%), Positives = 138/349 (38%), Gaps = 40/349 (11%)
Frame = +3
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 4854 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 5027
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 5028 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 5204
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 5205 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 5384
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R A +A++ ++ Q L+ ++EN
Sbjct: 5385 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 5558
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 5559 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 5738
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG 452
EEQ L++ RK+ D+ +ER DI S ++ L +K D+ +G
Sbjct: 5739 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 5879
>dbj|AB053226.1|AB053226 Sus scrofa MyHC-slow mRNA for myosin heavy chain slow isoform,
complete cds
Length = 5938
Score = 42.4 bits (98), Expect = 0.26
Identities = 75/372 (20%), Positives = 146/372 (39%), Gaps = 40/372 (10%)
Frame = +3
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 4785 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 4958
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 4959 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 5135
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKV 309
E +R +++ L+Q + + + +A E+A + I D A
Sbjct: 5136 IETSERVQLLHSQNTSLINQKKKMEADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 5315
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R A +A++ ++ Q L+ ++EN
Sbjct: 5316 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 5489
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 5490 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 5669
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALA 463
EEQ L++ RK+ D+ +ER DI S ++ L +K D+ +G + L
Sbjct: 5670 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKGLNEE*ICHILI 5843
Query: 464 KQVATALQNLQT 475
+ A Q+ Q+
Sbjct: 5844 CPILRAQQSSQS 5879
>emb|X03741.1|HSMYH2R Human cardiac mRNA for myosin heavy chain light meromyosin region
Length = 2022
Score = 42.4 bits (98), Expect = 0.26
Identities = 72/349 (20%), Positives = 138/349 (38%), Gaps = 40/349 (11%)
Frame = +1
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 868 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 1041
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 1042 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 1218
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 1219 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 1398
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R A +A++ ++ Q L+ ++EN
Sbjct: 1399 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 1572
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 1573 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 1752
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG 452
EEQ L++ RK+ D+ +ER DI S ++ L +K D+ +G
Sbjct: 1753 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 1893
>emb|X06976.1|HSMYOBH Human mRNA for cardiac beta myosin heavy chain
Length = 1747
Score = 42.4 bits (98), Expect = 0.26
Identities = 73/349 (20%), Positives = 138/349 (38%), Gaps = 40/349 (11%)
Frame = +3
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 594 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 767
Query: 203 PVLISA-------------MKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQ 249
+L +K + +N ++ L+ VE+ R L
Sbjct: 768 SLLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLADRELI 947
Query: 250 LTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKV 309
TS S++T + + +D+ L+Q + + + +A E+A + I D A
Sbjct: 948 ETSERVQLLHSQNTSLINQK-KKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 1124
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R A +A++ ++ Q L+ ++EN
Sbjct: 1125EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 1298
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 1299ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 1478
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG 452
EEQ L++ RK+ D+ +ER DI S ++ L +K D+ +G
Sbjct: 1479AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 1619
>gb|M17712.1|HUMMYH Human cardiac myosin heavy chain mRNA, 3' end
Length = 1747
Score = 42.4 bits (98), Expect = 0.26
Identities = 73/349 (20%), Positives = 138/349 (38%), Gaps = 40/349 (11%)
Frame = +3
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 594 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 767
Query: 203 PVLISA-------------MKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQ 249
+L +K + +N ++ L+ VE+ R L
Sbjct: 768 SLLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLADRELI 947
Query: 250 LTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKV 309
TS S++T + + +D+ L+Q + + + +A E+A + I D A
Sbjct: 948 ETSERVQLLHSQNTSLINQK-KKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 1124
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R A +A++ ++ Q L+ ++EN
Sbjct: 1125EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 1298
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 1299ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 1478
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG 452
EEQ L++ RK+ D+ +ER DI S ++ L +K D+ +G
Sbjct: 1479AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 1619
>gb|M21665.1|HUMMYHC5 Human beta-myosin heavy chain mRNA, 3' end
Length = 1688
Score = 42.4 bits (98), Expect = 0.26
Identities = 72/349 (20%), Positives = 138/349 (38%), Gaps = 40/349 (11%)
Frame = +1
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 535 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 708
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 709 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 885
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 886 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 1065
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R A +A++ ++ Q L+ ++EN
Sbjct: 1066EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 1239
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 1240ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 1419
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG 452
EEQ L++ RK+ D+ +ER DI S ++ L +K D+ +G
Sbjct: 1420AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 1560
>dbj|AB015484.1|AB015484 Dugesia japonica mRNA for myosin heavy chain, complete cds
Length = 6029
Score = 42.0 bits (97), Expect = 0.34
Identities = 57/315 (18%), Positives = 119/315 (37%), Gaps = 22/315 (6%)
Frame = +2
Query: 128 EAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEH 187
E E+ K+ + K E E E+++ KNL K+ + IDE ++ L+ ++
Sbjct: 2975 EEEMNKMKKEKKAADELQKKTE--ESLQAEEEKVKNLNKAKAKLEQTIDEMEENLSREQ- 3145
Query: 188 RVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEI-NEIIR 246
+ + VK + + + V + +EE LK + + S++I +E
Sbjct: 3146 --KVRADVEKVKRKIETELKQTQETVDDLERVKRELEEQLKRKEMELSNASSKIEDESGL 3319
Query: 247 VLQLTSWDEDAWA-----SKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQ 301
V QL ++ A +D EA ++A A + +Q +G L + + + G Q
Sbjct: 3320 VAQLQKKIKELQARIQELEEDLEAERQARAKAEKSRHQLEGELEELSDRLEEQGGATSAQ 3499
Query: 302 I----------------LDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGA 345
+ L+EA + + R++ DQ+ +A+ +
Sbjct: 3500 LELNKKREAELLKLKRDLEEANMQHDQMIAQSRKKQQDVANEFSDQLDQLQKAKAKIEKE 3679
Query: 346 SPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGE 405
+ + L+ L N+ +K++ + + + K++ + D N
Sbjct: 3680 KNEMKEDLNDLQSQLEALNKAKANSDKKIKELESQNAELQGKLEELNRHINDANNTSGKN 3859
Query: 406 EQIRGALAEARKIAE 420
+Q+ L + AE
Sbjct: 3860 QQLNAELQARLEEAE 3904
>emb|X60097.1|SSCEMM Streptococcus sp. (group C) emm gene for M protein
Length = 1629
Score = 42.0 bits (97), Expect = 0.34
Identities = 90/406 (22%), Positives = 163/406 (39%), Gaps = 6/406 (1%)
Frame = +1
Query: 216 KNSKNQGIEEALKNRNFTVEKMSAEINEI-IRVLQLTSWDEDAWASKDTEAMKRALASID 274
K +NQ +EE LK++ F + + INE+ +++ QL + D + E K A D
Sbjct: 571 KLKENQDLEEKLKDKEFYLGETLRYINELDLKLGQLNIDNIDLKHELEQEKQK---AEAD 741
Query: 275 SKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQ 334
+ +A+ + DA Q++R+ LD A +E ++ L + Q
Sbjct: 742 RQTLEAEKAKLEEEKQISDASRQSLRRDLD---------ASREAKKQLEAEYQKLEEEKQ 894
Query: 335 VADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNW 394
++D + + +++ + L+ K+E + EA S++ + + +DA++
Sbjct: 895 ISDASRQSLRRD---LDASREAKKQLEAEYQKLEEQNKISEA---SRKGLRRDLDASR-- 1050
Query: 395 LADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG-K 453
E ++Q+ LA AEL D KE I D R+G +
Sbjct: 1051--------EAKKQVEKDLANLT--AEL-DKVKEEKQI--------------SDASRKGLR 1155
Query: 454 GDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRG 513
D +R KQV AL+ ANS+ A A L ++E++++ + + +
Sbjct: 1156RDLDASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKKLTEKEKAELQA 1305
Query: 514 VGQAAIRGL----VAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQA 569
+A + L + LA + G K G+G++PQA
Sbjct: 1306KLEAEAKALKEKLAKQAEELAKLRAG--------KASDSQTPEATPGNKVVPGKGQAPQA 1461
Query: 570 RALASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
+Q ++ +K+ K Q+ T E ++ F LAV ATA
Sbjct: 1462GTKPNQNKEPMKETKRQLPS--TGEATNPFFTAAA----LAVMATA 1581
>gb|AF229810.1|AF229810 Felis catus slow myosin heavy chain (MyHCS) mRNA, partial cds
Length = 1524
Score = 42.0 bits (97), Expect = 0.34
Identities = 81/389 (20%), Positives = 151/389 (37%), Gaps = 51/389 (13%)
Frame = +1
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 367 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKGLQ 540
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 541 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 717
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 718 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 897
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R A +A++ ++ Q L+ ++EN
Sbjct: 898 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 1071
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 1072ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 1251
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDS------- 456
EEQ L++ RK+ D+ +ER DI S ++ L +K D+ +G +
Sbjct: 1252AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKGLNEE*LCHIFL 1425
Query: 457 --PEARALAKQVA--TALQNLQTKTNRAV 481
P R L K + Q L K N+A+
Sbjct: 1426ICPVPRVLTKPPVPESI*QPLWMKQNKAI 1512
>dbj|AK055751.1|AK055751 Homo sapiens cDNA FLJ31189 fis, clone KIDNE2000383, moderately
similar to ALPHA-1 CATENIN
Length = 2044
Score = 42.0 bits (97), Expect = 0.34
Identities = 32/102 (31%), Positives = 47/102 (45%), Gaps = 9/102 (8%)
Frame = +3
Query: 971 QCTDKRIRTNLLQVCERIPTISTQLKILSTVKA---TMLGRTNISDEESEQATEMLVHNA 1027
QC D + +LL +RI QL I S VKA + G +S +S + L+ A
Sbjct: 675 QCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMS---LIQAA 845
Query: 1028 QNLMQSVKETVREAEAASIKIRTDAGF------TLRWVRKTP 1063
+NLM +V +TV+ + AS K + G + W K P
Sbjct: 846 KNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSWKMKAP 971
>emb|X51591.1|HSBMHCV Human beta-MHC mRNA for beta myosin heavy chain clone gtMHC-V
Length = 3570
Score = 42.0 bits (97), Expect = 0.34
Identities = 72/349 (20%), Positives = 138/349 (38%), Gaps = 40/349 (11%)
Frame = +1
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 2416 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 2589
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 2590 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLADEEL 2766
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 2767 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 2946
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R A +A++ ++ Q L+ ++EN
Sbjct: 2947 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 3120
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 3121 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 3300
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG 452
EEQ L++ RK+ D+ +ER DI S ++ L +K D+ +G
Sbjct: 3301 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 3441
>ref|XM_089696.1| Homo sapiens similar to alpha-catenin-like protein (LOC159587),
mRNA
Length = 420
Score = 41.6 bits (96), Expect = 0.45
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = +1
Query: 581 KDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRL 640
+DL+ Q+++A+ VSD F DTT P+ +L AA RE+ E AA F H+ RL
Sbjct: 79 RDLRRQLRKAIIDHVSDSFLDTTVPLLVLIEAA-----KNGREKEIKEYAAIFHEHTSRL 243
>gb|M11338.1|STRM6 Streptococcus pyogenes emm6 gene coding for M6 protein
Length = 2111
Score = 41.6 bits (96), Expect = 0.45
Identities = 88/402 (21%), Positives = 176/402 (42%), Gaps = 14/402 (3%)
Frame = +3
Query: 228 KNRNFTVE--KMSAEINEIIR-----VLQLTSWDEDAWASKDTEAMKRALASIDSKLNQA 280
+N+N T E ++ AE N + +L+ +E+A A+K+ E K A+ ++ L++
Sbjct: 792 QNKNLTTENKELKAEENRLTTENKGLTKKLSEAEEEA-ANKEREN-KEAIGTLKKTLDET 965
Query: 281 KGWLRDPNASPGDAGEQ--AIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADL 338
++D A ++ E +++ LDE K ++ +E +E +GT K + + V D
Sbjct: 966 ---VKDKIAKEQESKETIGTLKKTLDETVK-DKIAKEQESKETIGTLKKT--LDETVKDK 1127
Query: 339 RARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADP 398
A+ Q + + + + + A+ + + + + A+ KQ +AKK + N +++
Sbjct: 1128 IAKEQESKETIGTLKKILDETVKDKIAREQKSKQDIGAL---KQELAKKDEG--NKVSEA 1292
Query: 399 NGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG-KGDSP 457
+ +G + A EA+K E K+ ++ L ++ ++ D RQG + D
Sbjct: 1293 SR--KGLRRDLDASREAKKQVE-----KDLANLTAELDKVKE-EKQISDASRQGLRRDLD 1448
Query: 458 EARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQA 517
+R KQV AL+ ANS+ A A L ++E++++ + + + +A
Sbjct: 1449 ASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKKLTEKEKAELQAKLEA 1598
Query: 518 AIRGL----VAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALA 573
+ L + LA + G K G+G++PQA
Sbjct: 1599 EAKALKEQLAKQAEELAKLRAG--------KASDSQTPDAKPGNKVVPGKGQAPQAGTKP 1754
Query: 574 SQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
+Q + +K+ K Q+ T E ++ F T + ++A A A
Sbjct: 1755 NQNKAPMKETKRQLPS--TGETANPFF-TAAALTVMATAGVA 1871
Score = 37.4 bits (85), Expect = 8.5
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Frame = +3
Query: 699 KNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIA- 757
K Q ++ +T +D+ + K + DAS + +++DLD + A ++ + A + A
Sbjct: 1338 KKQVEKDLANLTAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEEANSKLAAL 1517
Query: 758 RRANRILLVAKREVENSE---DPKFREAVKAASDELSKTISPMVMDAKAVAGNISD 810
+ N+ L +K+ E + K KA ++L+K + AK AG SD
Sbjct: 1518 EKLNKELEESKKLTEKEKAELQAKLEAEAKALKEQLAKQAEEL---AKLRAGKASD 1676
>emb|X60959.1|SPEMM57 S.pyogenes emm57 gene for M57 protein
Length = 1515
Score = 41.6 bits (96), Expect = 0.45
Identities = 90/429 (20%), Positives = 170/429 (38%), Gaps = 37/429 (8%)
Frame = +1
Query: 223 IEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLN---- 278
++E +K ++ T+EK + N+++ DE A K E+ L +S+++
Sbjct: 352 LDEIIKKQSETIEKEVEDYNKLV--------DEKASLDKKIESANSQLEFKNSQISELVA 507
Query: 279 -------QAKGWLRDPNASPGDAGEQAI---RQILDEAGKVGEL--CAGKERREILGTCK 326
Q + + N + + EQ +QI D GK EL K + +
Sbjct: 508 QAANLNEQIEKLSEEKNKAEEQSNEQLEFKNQQIADLIGKKAELEMKLAKAEEDRATYNR 687
Query: 327 MLGQMTDQVADLRAR-GQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIA 385
++ ++ +L+A+ + +A Q+AQ LD A++ ++ + S+Q +
Sbjct: 688 VIEGAKRELTELQAKLDETKQELANQQAQ-----LDAYKAEIAKLIQENKISEASRQGLR 852
Query: 386 KKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERD---------DILRSLG 436
+ +DA++ + E E Q L E KI+E RD + + L
Sbjct: 853 RDLDASR----EAKKQLEAEHQ---KLEEQNKISEASRQGLRRDLDASREAKKQVEKDLA 1011
Query: 437 EIAALTSK------LGDLRRQG-KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKA 489
+ A K + D RQG + D +R KQV AL+ ANS+ A A
Sbjct: 1012NLTAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEE---------ANSKLA-A 1161
Query: 490 AVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGL----VAEGHRLANVMMGPYRQDLLAKC 545
L ++E++++ + + + +A + L + LA + G K
Sbjct: 1162LEKLNKELEESKKLTEKEKAELQAKLEAEAKALKEQLAKQAEELAKLRAG--------KA 1317
Query: 546 DRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTP 605
G+G++PQA +Q + +K+ K Q+ T E ++ F T
Sbjct: 1318SDSQTPDTKPGNKAVPGKGQAPQAGTKPNQNKAPMKETKRQLPS--TGETANPFF-TAAA 1488
Query: 606 IKLLAVAAT 614
+ ++A A +
Sbjct: 1489LTVMATAGS 1515
Score = 37.4 bits (85), Expect = 8.5
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Frame = +1
Query: 699 KNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIA- 757
K Q ++ +T +D+ + K + DAS + +++DLD + A ++ + A + A
Sbjct: 985 KKQVEKDLANLTAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEEANSKLAAL 1164
Query: 758 RRANRILLVAKREVENSE---DPKFREAVKAASDELSKTISPMVMDAKAVAGNISD 810
+ N+ L +K+ E + K KA ++L+K + AK AG SD
Sbjct: 1165 EKLNKELEESKKLTEKEKAELQAKLEAEAKALKEQLAKQAEEL---AKLRAGKASD 1323
>gb|U21963.1|MHU21963 Mycoplasma hominis Mh81 Lmp1 (lmp1) gene, complete cds
Length = 4166
Score = 41.2 bits (95), Expect = 0.59
Identities = 82/451 (18%), Positives = 162/451 (35%), Gaps = 24/451 (5%)
Frame = +3
Query: 348 VAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLAD---PNGGPEG 404
VA + L AKV +KLE K++ ++ +N + + N
Sbjct: 885 VASNNTASMQSAKSSLDAKVAEITKKLETFNKDKEAKFNELKQTRNQIQEFINTNKNNPN 1064
Query: 405 EEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAK 464
++ L R D + DI + E+ +K D +A LAK
Sbjct: 1065 YSELISQLTSKRDSKNSVTDSSNKSDIESANTELKQALAK-------ANADKVQADNLAK 1223
Query: 465 QVATALQNLQTKTNRAVA-----NSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAI 519
+ L N + N A ++ +A LE ++++A + I + ++++
Sbjct: 1224 SIKEQLNNSVSNANTLSAKLTDKDNTIQQAKTELEKEVQKADQAIKSNNTASMQSAKSSL 1403
Query: 520 RGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDS 579
VAE + + +D AK + + + +P L SQL S
Sbjct: 1404 DAKVAE----ITKKLETFNKDKEAKFNELKQTRNQIQEFINTNK-NNPNYSELISQL-TS 1565
Query: 580 LKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGR 639
+D K + ++ + SD+ S T + LA A A N + E+ N +++
Sbjct: 1566 KRDSKNSVTDSSNK--SDIESANTELKQALAKANADKVQADNLAKSIKEQLNNSVSNANT 1739
Query: 640 LXXXXXXXXXXXXXNKSTVE------------GIQASVKTARELTPQVIS--AARILLRN 685
L K+ +E AS+++A+ ++ ++ N
Sbjct: 1740 LSAKLTDKDNTIQQAKTELEKEVQKANQAIKSNNTASMQSAKSSLDAKVAEITKKLETFN 1919
Query: 686 PGNQAAYEHFETMKNQWID--NVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMAN 743
+A + + +NQ + N K E I + S+ ++ +K + AN
Sbjct: 1920 KDKEAKFNELKQTRNQIQEFINTNKNNPNYSELISQLTSKRDSKNSVTDSSNKSDIESAN 2099
Query: 744 IQPQMLVAGATSIARRANRILLVAKREVENS 774
+ + +A A + +A+ + K ++ NS
Sbjct: 2100 TELKQALAKANADKVQADNLAKSIKEQLNNS 2192
>gb|AY056464.1| Mus musculus beta myosin heavy chain mRNA, complete cds
Length = 6054
Score = 41.2 bits (95), Expect = 0.59
Identities = 71/349 (20%), Positives = 138/349 (39%), Gaps = 40/349 (11%)
Frame = +1
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L + + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 4909 HLRMVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 5082
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 5083 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 5259
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKV 309
E +R +D+ L+Q + + + +A E+A + I D A
Sbjct: 5260 IETSERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 5439
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R A +A++ ++ Q L+ ++EN
Sbjct: 5440 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 5613
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 5614 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 5793
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG 452
EEQ L++ RK+ D+ +ER DI S ++ L +K D+ +G
Sbjct: 5794 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGAKG 5934
>gb|U21962.1|MHU21962 Mycoplasma hominis Mh56 Lmp1 (lmp1) gene, complete cds
Length = 4370
Score = 41.2 bits (95), Expect = 0.59
Identities = 82/451 (18%), Positives = 162/451 (35%), Gaps = 24/451 (5%)
Frame = +3
Query: 348 VAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLAD---PNGGPEG 404
VA + L AKV +KLE K++ ++ +N + + N
Sbjct: 885 VASNNTASMQSAKSSLDAKVAEITKKLETFNKDKEAKFNELKQTRNQIQEFINTNKNNPN 1064
Query: 405 EEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAK 464
++ L R D + DI + E+ +K D +A LAK
Sbjct: 1065 YSELISQLTSKRDSKNSVTDSSNKSDIESANTELKQALAK-------ANADKVQADNLAK 1223
Query: 465 QVATALQNLQTKTNRAVA-----NSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAI 519
+ L N + N A ++ +A LE ++++A + I + ++++
Sbjct: 1224 SIKEQLNNSVSNANTLSAKLTDKDNTIQQAKTELEKEVQKADQAIKSNNTASMQSAKSSL 1403
Query: 520 RGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDS 579
VAE + + +D AK + + + +P L SQL S
Sbjct: 1404 DAKVAE----ITKKLETFNKDKEAKFNELKQTRNQIQEFINTNK-NNPNYSELISQL-TS 1565
Query: 580 LKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGR 639
+D K + ++ + SD+ S T + LA A A N + E+ N +++
Sbjct: 1566 KRDSKNSVTDSSNK--SDIESANTELKQALAKANADKVQADNLAKSIKEQLNNSVSNANT 1739
Query: 640 LXXXXXXXXXXXXXNKSTVE------------GIQASVKTARELTPQVIS--AARILLRN 685
L K+ +E AS+++A+ ++ ++ N
Sbjct: 1740 LSAKLTDKDNTIQQAKTELEKEVQKADQAIKSNNTASMQSAKSSLDAKVAEITKKLETFN 1919
Query: 686 PGNQAAYEHFETMKNQWID--NVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMAN 743
+A + + +NQ + N K E I + S+ ++ +K + AN
Sbjct: 1920 KDKEAKFNELKQTRNQIQEFINTNKNNPNYSELISQLTSKRDSKNSVTDSSNKSDIESAN 2099
Query: 744 IQPQMLVAGATSIARRANRILLVAKREVENS 774
+ + +A A + +A+ + K ++ NS
Sbjct: 2100 TELKQALAKANADKVQADNLAKSIKEQLNNS 2192
>emb|X72932.1|SPEMMFCR S.pyogenes genes for Fcr protein and M protein
Length = 3162
Score = 41.2 bits (95), Expect = 0.59
Identities = 42/163 (25%), Positives = 75/163 (45%), Gaps = 6/163 (3%)
Frame = +1
Query: 654 NKSTVEGIQASVKTARELTP--QVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTG 711
NK + + Q S K A+ LT Q++ A+R LR N + K Q ++ +T
Sbjct: 2476 NKLSGQNEQLSPKNAK-LTEDKQILRASRQGLRRDLNAS-----REAKKQVEKDLANLTA 2637
Query: 712 LVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIA-RRANRILLVAKRE 770
+D+ + K + DAS + +++DLD + A ++ + A A + N++L +K+E
Sbjct: 2638 ELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEEANRKLAALEKLNKVLGESKKE 2817
Query: 771 VENSE---DPKFREAVKAASDELSKTISPMVMDAKAVAGNISD 810
+ + K KA ++L+K + AK A SD
Sbjct: 2818 TQKEKAELQAKLEAEAKALKEQLAKQAEEL---AKLRAEKASD 2937
>gb|U75316.1|SSU75316 Sus scrofa beta-myosin heavy chain mRNA, complete cds
Length = 5996
Score = 41.2 bits (95), Expect = 0.59
Identities = 71/349 (20%), Positives = 138/349 (39%), Gaps = 40/349 (11%)
Frame = +1
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H M + VK L
Sbjct: 4840 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--MAAEAQKQVKSLQ 5013
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 5014 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 5190
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKV 309
E +R +++ L+Q + + + +A E+A + I D A
Sbjct: 5191 IETSERVQLLHSQNTSLINQKKKMEADLSQLQTEVEEAVQESRNAEEKAKKAITDAAMMA 5370
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R A +A++ ++ Q L+ ++EN
Sbjct: 5371 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 5544
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 5545 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYNRQAEE 5724
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG 452
EEQ L++ RK+ D+ +ER DI S ++ L +K D+ +G
Sbjct: 5725 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 5865
>gb|AE006012.1|AE006012 Caulobacter crescentus section 338 of 359 of the complete genome
Length = 10208
Score = 40.8 bits (94), Expect = 0.77
Identities = 68/270 (25%), Positives = 106/270 (39%), Gaps = 55/270 (20%)
Frame = +1
Query: 292 GDAGEQ----AIRQILDEAGK--------VGELCA-GKERREILGTCKMLGQMT----DQ 334
G GEQ A++++LD AG V E+ + G+ RR I+ + T Q
Sbjct: 3829 GSQGEQHPQGAMKRLLDRAGVSRAEVRAWVPEVDSRGRWRRRIVNEALRPAEATADWLSQ 4008
Query: 335 VADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAAR---------------KLEAMTN 379
+A LRA G PVA + G V+ A+ E A + A+
Sbjct: 4009 IAALRAEAPGLDPVA-----EGLTGFSVIAARAEEEAAGACALLLREALEDPVRTAALVT 4173
Query: 380 SKQSIAKKI-DAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILR----- 433
Q++A+++ Q W P+ G+ A +A L ++P +L
Sbjct: 4174 PDQTLARRVMTRLQRWGVIPDSSAGAPLAAAGSAILALHLARLVEEPLNPVRLLAFAKHP 4353
Query: 434 -SLGE----IAALTSKLG---------DLRRQGKGDSPEARALAKQVATALQNLQTK--T 477
LGE AAL + G D+ R ++P+A ALA++V A+ +
Sbjct: 4354 LVLGEDEVPAAALLERKGLRGAAPGSADVLRARLREAPDALALAERVLVAVNHAAAPYGD 4533
Query: 478 NRAVANSRPAKAAVH-LEGKIEQAQRWIDN 506
A +R A+A V LE I + W N
Sbjct: 4534 GALAAPARAAQALVEALESLIAPDRLWAGN 4623
>emb|AJ319534.1|SPY319534 Streptococcus pyogenes partial emm gene for M protein, isolate
STNZ451
Length = 1042
Score = 40.8 bits (94), Expect = 0.77
Identities = 59/280 (21%), Positives = 125/280 (44%), Gaps = 7/280 (2%)
Frame = +1
Query: 148 AEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVML-VNSMNTVKELLPVLI 206
AE+ +DL L + + +++ ++E ++E ++N + ELL +
Sbjct: 226 AELKADNDDLKAEKNRLTTDNRGLTEKLEKAKEESVNKERESKENEKTLNDLNELLKKTV 405
Query: 207 SAMKIFVTTKNSKNQG-IEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEA 265
KI K+ ++ G +++ L N+ E+ +NE+++ ++ + +D A
Sbjct: 406 ED-KIAREQKSKQDIGALKQELANKQQESEENEKTLNELLKKTVEDKIAKEQKSKQDIGA 582
Query: 266 MKRALASID--SKLNQA--KGWLRDPNASPGDAGE-QAIRQILDEAGKVGELCAGKERRE 320
+K+ALA + +K++ A KG RD +AS + +A Q L+E K+ E RR+
Sbjct: 583 LKQALAKKEEQNKISDASRKGLRRDLDASREAKKQLEAEHQKLEEQNKISEASRKGLRRD 762
Query: 321 ILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNS 380
+ + + Q+ A +++ ++S+ A + R L+A +
Sbjct: 763 LDASREAKKQLE------------AEHQKLEEQNKISE------ASRKGLRRDLDASREA 888
Query: 381 KQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE 420
K+ + K ++ A + LA E++ L E++K+ E
Sbjct: 889 KKQVEKALEEANSKLA-------ALEKLNKELEESKKLTE 987
>gb|U26458.1|SRU26458 Snakehead retrovirus (SnRV), complete genome
Length = 10688
Score = 40.4 bits (93), Expect = 1.0
Identities = 26/119 (21%), Positives = 54/119 (44%)
Frame = +1
Query: 328 LGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKK 387
+ ++ +VADL + G+GA V +++ + + AK+E +L AMT K+ + +
Sbjct: 802 IAELEKEVADLTSAGRGADQVIAGMDKELKKTAEKYQAKLEELEEQLAAMTVEKEELESQ 981
Query: 388 IDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLG 446
++ + L + E + +L E + PK+R L+ + + + LG
Sbjct: 982 VEGLKESLVE-------AETKKVSLMEVLTMPTRSKGPKKRGPDLKQIRSLHVMADSLG 1137
>dbj|D38541.1|CELTMY1C Caenorhabditis elegans mRNA tmy-1 for tropomyosin isoform CeTMII,
complete cds
Length = 1468
Score = 40.0 bits (92), Expect = 1.3
Identities = 43/236 (18%), Positives = 97/236 (40%), Gaps = 5/236 (2%)
Frame = +2
Query: 366 KVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDP 425
K++ +K++AM K + + DAA EE++R + ++ E D
Sbjct: 62 KMDAIKKKMQAMKIEKDNALDRADAA-------------EEKVRQITEKLERVEEELRDT 202
Query: 426 KER-----DDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
+++ DD+ ++ +++A TSKL + + + E +L +++ + L+ R
Sbjct: 203 QKKMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERL 382
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
+ + A H + E+ ++ ++N ++ D + + E LA Y +
Sbjct: 383 KIATEKLEEATHNVDESERVRKVMENRSLQDEERAN-TVEAQLKEAQLLAEEADRKY-DE 556
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVS 596
+ K V GE + + + ++LK L+ ++A+ +E S
Sbjct: 557 VARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDS 724
>dbj|AB032020.1|AB032020 Seriola dumerilii mRNA for myosin heavy chain, complete cds
Length = 6045
Score = 40.0 bits (92), Expect = 1.3
Identities = 98/486 (20%), Positives = 185/486 (37%), Gaps = 45/486 (9%)
Frame = +3
Query: 18 QQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDMPPA 77
+ + HL M E + + I DLT + ++ L + K+TV+T + +I + + A
Sbjct: 4563 EALDHLETMKRENKNLQQEISDLTEQIGETGKSIHELEKA-KKTVETEKTEI-QSALEEA 4736
Query: 78 FIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRV 137
+E+ K+++ L + G D L + E+ +I R
Sbjct: 4737 EGTLEHEEAKILRVQLELNQ------------------VKGEVDRKLAEKDEEMEQIKRN 4862
Query: 138 CKGILEYL--TVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSM 195
+ +++ + T+ V + D + K + + +M + ++ E + L N
Sbjct: 4863 SQRVMDSMQSTLDAEVRSRNDALRVKKKMEGDLNEMEIQLSHANRQAA--EAQKQLRNVQ 5036
Query: 196 NTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEK----MSAEINEIIRVLQLT 251
+K+ L L A++ +E +K + VE+ M AEI E+ L+ T
Sbjct: 5037 GQLKDALLHLDDAVRG------------QEDMKEQVVMVERRNGLMVAEIEELRVALEQT 5180
Query: 252 SWDEDAWASKDTEAMKRA-------------LASIDSKLNQAKGWLRDPNASPGDAGEQA 298
+ +A +R ++S L Q + + D +A E+A
Sbjct: 5181 ERGRKVAEQELVDASERVGLLHSQNTSLLNTKKKLESDLVQVQSEVDDSIQEARNAEEKA 5360
Query: 299 IRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQ 358
+ I D A EL ++ L K ++T V DL+ R A +AM+ ++ Q
Sbjct: 5361 KKAITDAAMMAEELKKEQDTSAHLERMKKNLEVT--VKDLQHRLDEAENLAMKGGKKQLQ 5534
Query: 359 GLDVLTAKVENAA------------------RKLEAMTNSKQSIAKKIDAAQNWL----- 395
L+ ++E R+++ +T + K + Q+ +
Sbjct: 5535 KLESRVRELEAEVDAEQRRGSDAVKGVRKYERRVKELTYQTEEDKKNVHRLQDLVDKLQL 5714
Query: 396 ---ADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG 452
A E EEQ L+ RK+ ++ +ER DI S ++ L +K D G
Sbjct: 5715 KVKAYKRQAEESEEQANTHLSRLRKVQHEMEEAQERADIAES--QVNKLRAKSRD---TG 5879
Query: 453 KGDSPE 458
K +S E
Sbjct: 5880 KSESAE 5897
>dbj|D38540.1|CELTMY1B Caenorhabditis elegans tmy-1 mRNA for tropomyosin isoform CeTMI,
complete cds
Length = 1264
Score = 40.0 bits (92), Expect = 1.3
Identities = 43/236 (18%), Positives = 97/236 (40%), Gaps = 5/236 (2%)
Frame = +2
Query: 366 KVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDP 425
K++ +K++AM K + + DAA EE++R + ++ E D
Sbjct: 62 KMDAIKKKMQAMKIEKDNALDRADAA-------------EEKVRQITEKLERVEEELRDT 202
Query: 426 KER-----DDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA 480
+++ DD+ ++ +++A TSKL + + + E +L +++ + L+ R
Sbjct: 203 QKKMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERL 382
Query: 481 VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD 540
+ + A H + E+ ++ ++N ++ D + + E LA Y +
Sbjct: 383 KIATEKLEEATHNVDESERVRKVMENRSLQDEERAN-TVEAQLKEAQLLAEEADRKY-DE 556
Query: 541 LLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVS 596
+ K V GE + + + ++LK L+ ++A+ +E S
Sbjct: 557 VARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDS 724
>emb|X91846.1|SSMYHCC Sus scrofa mRNA for cardiac myosin heavy chain (pAZMY7)
Length = 937
Score = 40.0 bits (92), Expect = 1.3
Identities = 64/300 (21%), Positives = 120/300 (39%), Gaps = 3/300 (1%)
Frame = +3
Query: 179 QQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMS 238
+QEL RV L++S NT LI+ K + +EEA++ EK
Sbjct: 111 EQELIETSERVQLLHSQNTS------LINQKKKMEADLSQLQTEVEEAVQECRNAEEKAK 272
Query: 239 AEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQA 298
I + + + ++D S E MK+ + EQ
Sbjct: 273 KAITDAAMMAEELKKEQDT--SAHLERMKKNM-------------------------EQT 371
Query: 299 IRQI---LDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQ 355
I+ + LDEA ++ L GK++ + K+ ++ + +L A Q + +++ ++
Sbjct: 372 IKDLQHRLDEAEQIA-LKGGKKQLQ-----KLEARVRELENELEAE-QKRNAESVKGMRK 530
Query: 356 VSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEA 415
+ + LT + E + L + + + K+ A + E EEQ L++
Sbjct: 531 SERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQ------AEEAEEQANTNLSKF 692
Query: 416 RKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQT 475
RK+ D+ +ER DI S ++ L +K D+ +G + L + A Q+ Q+
Sbjct: 693 RKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKGLNEE*ICHILICPILRAQQSSQS 866
>gb|AF006665.1|AF006665 Bacillus subtilis 168 region at 182 min containing the cge gene cluster
Length = 30100
Score = 39.7 bits (91), Expect = 1.7
Identities = 76/355 (21%), Positives = 143/355 (39%), Gaps = 17/355 (4%)
Frame = +2
Query: 87 KLVQAAQMLQSDPYSVPARDYLIDGS-RGILSGTSDLLLTF-DEAEVRKIIRVCKGILEY 144
KL +A + ++SD Y D L+DG+ +G++ D T+ D+ + + E
Sbjct: 23021 KLNKAYEQIKSDYYQKTDDDKLVDGAIKGMIQSLDDPYSTYMDQEQAKSFDETISASFEG 23200
Query: 145 LTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPV 204
+ A+V E +++ + G K I R Q + V +N V +
Sbjct: 23201 IG-AQVEEKDGEILIVSPIKGSPAEKAG--IKPRDQIIKVNGKSVKGMNVNEAVALIRGK 23371
Query: 205 LISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEI-IRVLQLTSWDEDAWASKDT 263
+ +K+ + N I+ ++K VE + +E+ + I +Q+TS+ E
Sbjct: 23372 KGTKVKLELNRAGVGN--IDLSIKRDTIPVETVYSEMKDNNIGEIQITSFSETT-----A 23530
Query: 264 EAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQA-------------IRQILDEAGKVG 310
+ + A+ S++ K AKG++ D +PG EQA I Q+ + G
Sbjct: 23531 KELTDAIDSLEKK--GAKGYILDLRGNPGGLMEQAITMSNLFIDKGKNIMQVEYKNGSKE 23704
Query: 311 ELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQ-GLDVLTAKVEN 369
+ A KER+ T ++ T A++ A A+ ++ V G
Sbjct: 23705 VMKAEKERKVTKPTVVLVNDGTASAAEIMA-------AALHESSNVPLIGETTFGKGTVQ 23863
Query: 370 AARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDD 424
A++ + + K ++AK + A W+ P Q++ L + K+ L D
Sbjct: 23864 TAKEYDDGSTVKLTVAKWLTADGEWIHKKGIKP----QVKAELPDYAKLPYLDAD 24016
>dbj|AB059400.1|AB059400 Bos taurus MyHC-slow mRNA for myosin heavy chain slow, complete cds
Length = 5930
Score = 39.7 bits (91), Expect = 1.7
Identities = 70/349 (20%), Positives = 138/349 (39%), Gaps = 40/349 (11%)
Frame = +3
Query: 144 YLTVAEVVETMEDLVTYTKNLGPGMTK-MAKMIDERQQELTHQEHRVMLVNSMNTVKELL 202
+L V + ++T D T ++N + K M ++E + +L+H + + VK L
Sbjct: 4776 HLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANR--LAAEAQKQVKSLQ 4949
Query: 203 PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKD 262
L+ +I + N ++E + + AE+ E+ V++ T +
Sbjct: 4950 S-LLKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQEL 5126
Query: 263 TEAMKRALA-------------SIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKV 309
E +R +++ L+Q + + + +A E+A + I D A
Sbjct: 5127 IETSERVQLLHSQNTSLINQKKKMEADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMA 5306
Query: 310 GELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVEN 369
EL KE+ +M M + DL+ R A +A++ ++ Q L+ ++EN
Sbjct: 5307 EEL--KKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN 5480
Query: 370 ------------------AARKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPE 403
+ R+++ +T + K + Q+ + A E
Sbjct: 5481 ELEAEQKRNAESVKGMRKSERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQAEE 5660
Query: 404 GEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG 452
EEQ L++ RK+ D+ +ER DI S ++ L +K D+ +G
Sbjct: 5661 AEEQANTNLSKFRKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 5801
>emb|X95601.1|MHLMP34GN M.hominis lmp3 and lmp4 genes
Length = 6797
Score = 39.7 bits (91), Expect = 1.7
Identities = 127/704 (18%), Positives = 254/704 (36%), Gaps = 56/704 (7%)
Frame = +1
Query: 127 DEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNL----GPGMTKMAKMIDERQQEL 182
D ++ +K + + I + L + ++ +T E+L K L +K+ +E++QEL
Sbjct: 1360 DSSDAKKALNENQ-IDDSLPIDKIKKTNENLENAKKELLNKINAERELQSKIFNEKKQEL 1536
Query: 183 THQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEIN 242
V + KE+ K+F+ T ++ IE+ +KN+ VEK ++ +
Sbjct: 1537 KR-------VLDLEDTKEV--DFTKEQKVFIETNINETSSIED-IKNKIIEVEKATSSLT 1686
Query: 243 EIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAK----------------GWLRD 286
I + E KD + I++KLN AK G ++
Sbjct: 1687 SKILNTKQQELQEFENIKKDLQDF------INTKLNDAKYQSIKQKALDKINSLNGINKN 1848
Query: 287 PNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTC--------KMLGQMTDQVADL 338
AG+ A+ + +EAG E G+ ++ L K+L ++ DL
Sbjct: 1849 STIKEIKAGQNALIKAKEEAGLEKEKLDGQNIKDTLKETINNAKEFKKLLIDNDQKIVDL 2028
Query: 339 RARGQGASPVAMQKAQQVSQGL----DVLTAKVENAARKLEAMTNSKQSIAKKIDAA--- 391
++ A Q + + + D+L K+ L K++ +++
Sbjct: 2029 KSNLDNEISKAEQSLSKDKESMESANDLLNTKLIEYKEILNKFNQEKEAKFNELEQTRKN 2208
Query: 392 -QNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRR 450
+N+L D + L A+ + + + DI+ + AL L D +
Sbjct: 2209 IENFLTDEVKNNPNYATLVKDLTNAKDAKKSVTNSSNKSDIIAA---NEALIQALADANK 2379
Query: 451 QGKGDSPEARALAKQVATALQNLQTKTNRAVA-----NSRPAKAAVHLEGKIEQAQRWID 505
K EA K + L L K N + +S KA L +I A + ++
Sbjct: 2380 -AKDQVDEAN---KSIKEQLNALIDKANTLLPQLNDNDSEIVKAKESLNAEITNANKAVN 2547
Query: 506 NPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGE 565
+D Q+A L + ++ N + + +D AK +
Sbjct: 2548 Q---NDNASMQSAKSSLDDKVTKIQN-QLTEFNKDKDAKFKELEQTRKDIDNFLTDDVKN 2715
Query: 566 SPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEV 625
+P L L ++ D K+ + + E+ + + VA +A + +
Sbjct: 2716 NPNYATLVKDLTNAKDDKKSVTKSSNKSEIIAANDELKQALDKAKVAKDQIDEA--NKSI 2889
Query: 626 FDERAANFENHSGRLXXXXXXXXXXXXXNKSTVEGIQASVKTARELTPQVISAARILLRN 685
++ + + N + L + IQ++ + P + +A+ L
Sbjct: 2890 KEQLSDSITNANQLLNKLVDSDKDIQKAKTELSQEIQSASQELNLNNPTSMQSAKESLDA 3069
Query: 686 PGNQAA--YEHFETMKNQWIDNVEKMTGLVDEAIDT-------KSLLDA------SEEAI 730
+ E F K+ +EK +DE I+T +L+ S+ ++
Sbjct: 3070 KVTEITKKLETFNKDKDVKFKELEKTRKDIDEFINTNKTNPNYSTLISELTSKRDSKNSV 3249
Query: 731 KKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENS 774
+K + AN + + +A A + +A+ + K ++ NS
Sbjct: 3250 TNSSNKSDIETANTELKQALAKANTDKAQADNLAKSTKEQLNNS 3381
>gb|AF272857.1|AF272857 Methanopyrus kandleri carbon monoxide dehydrogenase catalytic subunit
gene, complete cds
Length = 2758
Score = 39.7 bits (91), Expect = 1.7
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Frame = +3
Query: 250 LTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAG-K 308
L WD + EA++RA+ + + ++ + + +PNA + G +R +LD G +
Sbjct: 1392 LILWDPERAEEVAEEAVQRAIEAFKERRSKHEDKIMEPNAQARERG--GVRILLDRGGRR 1565
Query: 309 VGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVE 368
+GE R I G C ++G +L + G V + K + + + + VL A
Sbjct: 1566 LGERAQADRRSTIRGVCAIMG-----CTNLSSGGHNVPAVELAK-EMIKRDVLVLGAGCV 1727
Query: 369 NAA 371
N A
Sbjct: 1728 NGA 1736
>emb|Z99114.1|BSUB0011 Bacillus subtilis complete genome (section 11 of 21): from 2000171 to
2207900
Length = 207730
Score = 39.7 bits (91), Expect = 1.7
Identities = 76/355 (21%), Positives = 143/355 (39%), Gaps = 17/355 (4%)
Frame = -1
Query: 87 KLVQAAQMLQSDPYSVPARDYLIDGS-RGILSGTSDLLLTF-DEAEVRKIIRVCKGILEY 144
KL +A + ++SD Y D L+DG+ +G++ D T+ D+ + + E
Sbjct: 132241 KLNKAYEQIKSDYYQKTDDDKLVDGAIKGMIQSLDDPYSTYMDQEQAKSFDETISASFEG 132062
Query: 145 LTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPV 204
+ A+V E +++ + G K I R Q + V +N V +
Sbjct: 132061 IG-AQVEEKDGEILIVSPIKGSPAEKAG--IKPRDQIIKVNGKSVKGMNVNEAVALIRGK 131891
Query: 205 LISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEI-IRVLQLTSWDEDAWASKDT 263
+ +K+ + N I+ ++K VE + +E+ + I +Q+TS+ E
Sbjct: 131890 KGTKVKLELNRAGVGN--IDLSIKRDTIPVETVYSEMKDNNIGEIQITSFSETT-----A 131732
Query: 264 EAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQA-------------IRQILDEAGKVG 310
+ + A+ S++ K AKG++ D +PG EQA I Q+ + G
Sbjct: 131731 KELTDAIDSLEKK--GAKGYILDLRGNPGGLMEQAITMSNLFIDKGKNIMQVEYKNGSKE 131558
Query: 311 ELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQ-GLDVLTAKVEN 369
+ A KER+ T ++ T A++ A A+ ++ V G
Sbjct: 131557 VMKAEKERKVTKPTVVLVNDGTASAAEIMA-------AALHESSNVPLIGETTFGKGTVQ 131399
Query: 370 AARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDD 424
A++ + + K ++AK + A W+ P Q++ L + K+ L D
Sbjct: 131398 TAKEYDDGSTVKLTVAKWLTADGEWIHKKGIKP----QVKAELPDYAKLPYLDAD 131246
>gb|AF015775.1|AF015775 Bacillus subtilis YodA (yodA), YodB (yodB), YodC (yodC), YodD (yodD),
ABC-transporter (yodE), permease (yodF), proteinase
(ctpA), YodH (yodH), YodI (yodI), carboxypeptidase
(yodJ), purine nucleoside phosphorylase (deoD), YodL
(yodL), YodM (yodM), YodN >
Length = 29950
Score = 39.7 bits (91), Expect = 1.7
Identities = 76/355 (21%), Positives = 143/355 (39%), Gaps = 17/355 (4%)
Frame = -1
Query: 87 KLVQAAQMLQSDPYSVPARDYLIDGS-RGILSGTSDLLLTF-DEAEVRKIIRVCKGILEY 144
KL +A + ++SD Y D L+DG+ +G++ D T+ D+ + + E
Sbjct: 7111 KLNKAYEQIKSDYYQKTDDDKLVDGAIKGMIQSLDDPYSTYMDQEQAKSFDETISASFEG 6932
Query: 145 LTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPV 204
+ A+V E +++ + G K I R Q + V +N V +
Sbjct: 6931 IG-AQVEEKDGEILIVSPIKGSPAEKAG--IKPRDQIIKVNGKSVKGMNVNEAVALIRGK 6761
Query: 205 LISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEI-IRVLQLTSWDEDAWASKDT 263
+ +K+ + N I+ ++K VE + +E+ + I +Q+TS+ E
Sbjct: 6760 KGTKVKLELNRAGVGN--IDLSIKRDTIPVETVYSEMKDNNIGEIQITSFSETT-----A 6602
Query: 264 EAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQA-------------IRQILDEAGKVG 310
+ + A+ S++ K AKG++ D +PG EQA I Q+ + G
Sbjct: 6601 KELTDAIDSLEKK--GAKGYILDLRGNPGGLMEQAITMSNLFIDKGKNIMQVEYKNGSKE 6428
Query: 311 ELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQ-GLDVLTAKVEN 369
+ A KER+ T ++ T A++ A A+ ++ V G
Sbjct: 6427 VMKAEKERKVTKPTVVLVNDGTASAAEIMA-------AALHESSNVPLIGETTFGKGTVQ 6269
Query: 370 AARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDD 424
A++ + + K ++AK + A W+ P Q++ L + K+ L D
Sbjct: 6268 TAKEYDDGSTVKLTVAKWLTADGEWIHKKGIKP----QVKAELPDYAKLPYLDAD 6116
>emb|Z22219.1|SPPAMPR S.pyogenes PAM protein gene
Length = 1164
Score = 39.3 bits (90), Expect = 2.2
Identities = 74/371 (19%), Positives = 149/371 (39%), Gaps = 2/371 (0%)
Frame = +1
Query: 219 KNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLN 278
+N+G++ L+ + ++ + ++ ++ +L + + E +K D K
Sbjct: 187 ENKGLKTDLREKEEELQGLKDDVEKLTADAELQRLKNERHEEAELERLKSERHDHDKKEA 366
Query: 279 QAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADL 338
+ K L D A + A+R I ++ + E A +++ + Q++D
Sbjct: 367 ERKA-LEDKLADKQEHLNGALRYINEKEAEAKEKEAEQKKLK----------EEKQISDA 513
Query: 339 RARGQGASPVAMQKAQ-QVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLAD 397
+G A ++A+ QV + L LTA+++ + + S+Q + + +DA++
Sbjct: 514 SRQGLRRDLDASREAKKQVEKDLANLTAELDKVKEEKQISDASRQGLRRDLDASR----- 678
Query: 398 PNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG-KGDS 456
E ++Q+ LA AEL D KE I D RQG + D
Sbjct: 679 -----EAKKQVEKGLANLT--AEL-DKVKEEKQI--------------SDASRQGLRRDL 792
Query: 457 PEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQ 516
+R KQV AL+ ANS+ A A L ++E++++ + + + +
Sbjct: 793 DASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKKLTEKEKAELQAKLE 942
Query: 517 AAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQL 576
A + L + + A + + K G+G++PQA +Q
Sbjct: 943 AEAKALKEQLAKQAEELAKLRAE----KASDSQTPDAKPGNKAVPGKGQAPQAGTKPNQN 1110
Query: 577 QDSLKDLKAQM 587
+ +K+ K Q+
Sbjct: 1111KAPMKETKRQL 1143
>gb|M95774.1|STRMPROTN Group G streptococci M protein gene, complete cds
Length = 2280
Score = 39.3 bits (90), Expect = 2.2
Identities = 110/519 (21%), Positives = 203/519 (38%), Gaps = 19/519 (3%)
Frame = +1
Query: 116 LSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPG-----MTK 170
++G L E E K ++ K I E T A + T D K L + +
Sbjct: 670 VTGDDSRRLFAKEIEENKELK--KQISELTTKASNLATELDNTKQDKELAKETLLYEINE 843
Query: 171 MAKMIDERQQELTHQE-HRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGI---EEA 226
K +D + L +E R L S++T K L +++ K + + E+
Sbjct: 844 KKKFVDSIAKVLEDKEVQRHNLQQSLDTAKAELDKKEQELQLVKGNLGQKEKELDQKEKE 1023
Query: 227 LKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRD 286
L+N E +++ E I + + E + + LA +++ Q K +D
Sbjct: 1024 LENEELAKESAISDLTEQINAKKA-----------EVEKLAQDLADKSAEI-QEKEAEKD 1167
Query: 287 PNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGAS 346
+A + Q ++ K + A ++ E + +LG D +A L A+ +
Sbjct: 1168 RQQHMYEA---FMSQYKEKVEKQEQELAKLKQLETINN-NLLGNAKDMIAKLSAKNE--- 1326
Query: 347 PVAMQKAQQVSQGLDVLTAKVENAARK-LEAMTNSKQSIAKKIDAAQNWLADPN----GG 401
+A KA+ Q K+ +A+R+ L N+ + K+++A L + N
Sbjct: 1327 QLASDKAKLEEQN------KISDASRQGLRRDLNASREAKKQLEAEHQKLEEQNKISEAS 1488
Query: 402 PEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG-KGDSPEAR 460
+G + A EA+K E K+ ++ L ++ ++ D R+G + D +R
Sbjct: 1489 RKGLRRDLDASREAKKQVE-----KDLANLTAELDKVKE-DKQISDASRKGLRRDLEASR 1650
Query: 461 ALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIR 520
KQV AL+ ANS+ A A L ++E++++ + + + +A +
Sbjct: 1651 EAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKKLTEKEKAELQAKLEAEAK 1800
Query: 521 GL----VAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQL 576
L + LA + G K G+G++PQA +Q
Sbjct: 1801 ALKEKLAKQAEELAKLRAG--------KASDSQTPDAKPGNNVVPGKGQAPQAGTKPNQN 1956
Query: 577 QDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
++ +K+ K Q+ T E ++ F LAV ATA
Sbjct: 1957 KEPMKETKRQLPS--TGEATNPFFTAAA----LAVMATA 2055
>emb|X58179.1|SPEMM52 S.pyogenes for emm52 gene
Length = 1372
Score = 39.3 bits (90), Expect = 2.2
Identities = 87/403 (21%), Positives = 166/403 (40%), Gaps = 5/403 (1%)
Frame = +3
Query: 218 SKNQGIEEALKNRNFTVEKMSAEI---NEIIRVLQLTSWDEDAWASKDTEAMKRALASID 274
S+N+ ++ L+ RN ++ ++ ++ N+ + + +L + + E +K D
Sbjct: 267 SENEELKADLQKRNKKLKNLNDDVKKLNDEVALERLKNERHVHDEEVELERLKNERHDHD 446
Query: 275 SKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQ 334
K + K L D A + + A+R I ++ ER+E K L + Q
Sbjct: 447 KKEAERKA-LEDKLADKQEHLDGALRYINEKEA---------ERKEKEAEQKKLKE-EKQ 593
Query: 335 VADLRARGQGASPVAMQKAQ-QVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQN 393
++D +G A ++A+ QV + L LTA+++ + + S+Q + + +DA++
Sbjct: 594 ISDASRQGLRRDLDASREAKKQVEKDLANLTAELDKVKEEKQISDASRQGLRRDLDASR- 770
Query: 394 WLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG- 452
E ++Q+ LA AEL D KE I D RQG
Sbjct: 771 ---------EAKKQVEKDLANLT--AEL-DKVKEEKQI--------------SDASRQGL 872
Query: 453 KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDR 512
+ D +R KQV AL+ ANS+ A A L ++E++++ + + +
Sbjct: 873 RRDLDASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKKLTEKEKAELQ 1022
Query: 513 GVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARAL 572
+A + L + + A + + K G+G++PQA
Sbjct: 1023AKLEAEAKALKEKLAKQAEELAKLRAE----KASDSQTPDAKPGNKAVPGKGQAPQAGTK 1190
Query: 573 ASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
+Q + +K+ K Q+ T E ++ F T + ++A A A
Sbjct: 1191PNQNKAPMKETKRQLPS--TGEAANPFF-TAAALTVMATAGVA 1310
>gb|AF097904.1|AF097904 Rana catesbeiana myosin heavy chain (MHC-1) mRNA, partial cds
Length = 2772
Score = 38.9 bits (89), Expect = 2.9
Identities = 62/281 (22%), Positives = 115/281 (40%), Gaps = 3/281 (1%)
Frame = +2
Query: 179 QQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMS 238
+QEL RV L++S NT LI++ K + + +EEA++ EK
Sbjct: 1928 EQELLDASERVQLLHSQNTS------LINSKKKLESDMSQLQNEVEEAVQEARNAEEKAK 2089
Query: 239 AEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQA 298
I + + + ++D S E MK+ L EQ
Sbjct: 2090 KAITDASMMAEELKKEQDT--SAHLERMKKNL-------------------------EQT 2188
Query: 299 IRQI---LDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQ 355
++ + LDEA ++ + GK++ + K+ ++ D +L A Q A++ ++
Sbjct: 2189 VKDLQHRLDEAEQLA-MKGGKKQLQ-----KLESRVRDVENELDAE-QKRGTEAIKGVRK 2347
Query: 356 VSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEA 415
+ + LT + E + + + + + K+ A + E EEQ LA
Sbjct: 2348 YERRVKELTYQSEEDKKNVLRLQDLVDKLQLKVKAYKRQ------AEESEEQANAHLARF 2509
Query: 416 RKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDS 456
RK+ ++ +ER DI S ++ L +K D+ + KG+S
Sbjct: 2510 RKVQHELEEAEERADIAES--QVNKLRAKSRDISGK-KGES 2623
>gb|AF041382.1|AF041382 Drosophila melanogaster microtubule binding protein D-CLIP-190 mRNA,
complete cds
Length = 5999
Score = 38.9 bits (89), Expect = 2.9
Identities = 89/431 (20%), Positives = 168/431 (38%), Gaps = 13/431 (3%)
Frame = +3
Query: 328 LGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKK 387
L Q+ Q A A G+ S + ++SQ L ++ E +L++ ++ ++ +K+
Sbjct: 3144 LEQLQQQAA---ASGEEGSKTVAKLHDEISQ----LKSQAEETQSELKSTESNLEAKSKQ 3302
Query: 388 IDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGD 447
++AA NG E E + G L E +I +L + +E AAL+S D
Sbjct: 3303 LEAA-------NGSLEEEAKKSGQLQE--QITKLKSEVEETQ---------AALSSYHTD 3428
Query: 448 LRRQGKGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDNP 507
+ + KQ+ A L+ K N+ A SR A L+ K+++ +
Sbjct: 3429 VESK-----------TKQLEAANAALE-KVNKEYAESRAE--ASDLQDKVKEITDTLHAE 3566
Query: 508 TVDDRGVGQAAIRGL------VAEGHRLANVMMGPYRQDLLAKCD-----RVXXXXXXXX 556
+R A L +A GH+ + Q++L K R
Sbjct: 3567 LQAERSSSSALHTKLSKFSDEIATGHKELTSKADAWSQEMLQKEKELQELRQQLQDSQDS 3746
Query: 557 XXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAP 616
+ EGE + ++S+K+L+ ++ +A T+ + ++ + T T IK
Sbjct: 3747 QTKLKAEGERKE-----KSFEESIKNLQEEVTKAKTENL-ELSTGTQTTIK--------- 3881
Query: 617 PDAPNREEVFDERAANFENHSGRLXXXXXXXXXXXXXNKSTVEGIQASVKTARELTPQVI 676
D R E+ + + E + K+ VE IQ + ++
Sbjct: 3882 -DLQERLEITNAELQHKEKMASE-------DAQKIADLKTLVEAIQVANANISATNAELS 4037
Query: 677 SAARILLRNPGN-QAAYEHFETMKNQWIDN-VEKMTGLVDEAIDTKSLLDASEEAIKKDL 734
+ +L +E FE + + +EK+TG+ +E +T LD ++ ++
Sbjct: 4038 TVLEVLQAEKSETNHIFELFEMEADMNSERLIEKVTGIKEELKETHLQLDERQKKFEELE 4217
Query: 735 DKCKVAMANIQ 745
+K K A + Q
Sbjct: 4218 EKLKQAQQSEQ 4250
>gb|AE004684.1|AE004684 Pseudomonas aeruginosa PA01, section 245 of 529 of the complete
genome
Length = 9788
Score = 38.9 bits (89), Expect = 2.9
Identities = 71/397 (17%), Positives = 154/397 (37%), Gaps = 14/397 (3%)
Frame = +3
Query: 92 AQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVV 151
A L S S AR ++ GS ++ + + L R ++R + ++E++
Sbjct: 3372 ASDLHSSSISAEARRTMLLGSLVLIGASLAVALLSLWLVNRNLVRPVQRLIEHIAQLSHG 3551
Query: 152 ETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKI 211
+ E + K+ + A + + ++ + R +++ L + S M
Sbjct: 3552 DFGERIEIRRKDELGKLALAANTLRDFLVDIFDRLRRS--TRDLDSASGSLNAIASLMAA 3725
Query: 212 FVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALA 271
+ S+ + A++ + T ++++ + R + D A + + M+ +
Sbjct: 3726 GTREQFSRTDQVATAMQEMSATAQEVARYAGDAARAAD----EADDSAQRGEDVMEETIR 3893
Query: 272 SIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQM 331
SI + D + IRQ+ ++G++G++ I G + +
Sbjct: 3894 SIGEMRKEI------------DHTVEVIRQLESDSGRIGKVLD-----VIRGIAEQTNLL 4022
Query: 332 TDQVADLRAR----GQGASPVA----------MQKAQQVSQGLDVLTAKVENAARKLEAM 377
A AR G+G + VA + ++ Q +D + NAAR +E+
Sbjct: 4023 ALNAAIEAARAGDAGRGFAVVADEVRTLAQRTAESIAEIHQIIDTVQNGAVNAARAIESG 4202
Query: 378 TNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGE 437
+ ++ A+++ A L E + +A A + + ++I R+L E
Sbjct: 4203 QSRSEAGAEQVANAGAMLRQITASVESIRDMNRQIATAAE-----EQTAVAEEISRNLTE 4367
Query: 438 IAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQ 474
IA++ S + Q + S + L+ Q+ ALQ L+
Sbjct: 4368 IASIASSNQEQVEQTEAASRDLHGLSAQLGDALQRLR 4478
>dbj|AB000214.1|AB000214 Theragra chalcogramma mRNA for myosin heavy chain, partial cds
Length = 3441
Score = 38.9 bits (89), Expect = 2.9
Identities = 98/482 (20%), Positives = 184/482 (37%), Gaps = 45/482 (9%)
Frame = +3
Query: 18 QQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDMPPA 77
+ + HL M E + + I DLT + ++ L + K+ V+T + +I + + A
Sbjct: 2022 ETLDHLETMKRENKNLQQEISDLTEQIGETGKSIHELEK-SKKQVETEKTEI-QSALEEA 2195
Query: 78 FIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRV 137
+E+ +K+++ L + G D L + E+ +I R
Sbjct: 2196 EGTLEHEESKILRVQLELNQ------------------IKGEVDRKLAEKDEEMEQIKRN 2321
Query: 138 CKGILEYL--TVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSM 195
+ +++ + T+ V + D + K + + +M + ++ E + L N
Sbjct: 2322 SQRVIDSMQATLDSEVRSRNDALRIKKKMEGDLNEMEIQLSHANRQAA--EAQKQLRNVQ 2495
Query: 196 NTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEK----MSAEINEIIRVLQLT 251
+K+ L A++ E LK + VE+ M AEI E+ L+ T
Sbjct: 2496 GQLKDAQLHLDDAVRA------------AEDLKEQAAMVERRNGLMVAEIEELRAALEQT 2639
Query: 252 SWDEDAWASKDTEAMKR-------------ALASIDSKLNQAKGWLRDPNASPGDAGEQA 298
+ +A +R + ++S L Q +G + D +A E+A
Sbjct: 2640 ERGRKVAEQELVDASERVGLLHSQNTSLLNSKKKLESDLVQVQGEVDDSVQEARNAEEKA 2819
Query: 299 IRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQ 358
+ I D A EL ++ L K ++T V DL+ R A +AM+ ++ Q
Sbjct: 2820 KKAITDAAMMAEELKKEQDTSSHLERMKKNLEVT--VKDLQHRLDEAENLAMKGGKKQLQ 2993
Query: 359 GLDV----LTAKVENAARK-LEAMTNSKQSIAKKIDAAQNWLADPNGG------------ 401
L+ L ++V+N R+ EA+ ++ + + D G
Sbjct: 2994 KLEARVRDLESEVDNEQRRGAEAIKGVRKYERRVKELTYQTEEDKKNGCRLQDLVDKLQL 3173
Query: 402 ---------PEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG 452
E EEQ L++ RK+ + +ER DI + ++ L +K D G
Sbjct: 3174 KVKAYKRQSEEAEEQANSYLSKCRKVQHELEAAEERADIAET--QVNKLRAKTRD---SG 3338
Query: 453 KG 454
KG
Sbjct: 3339 KG 3344
>dbj|AB039332.1|AB039332 Pseudomonas aeruginosa gene for chemotactic transducer CtpH, complete
cds
Length = 3604
Score = 38.9 bits (89), Expect = 2.9
Identities = 71/397 (17%), Positives = 154/397 (37%), Gaps = 14/397 (3%)
Frame = +2
Query: 92 AQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVV 151
A L S S AR ++ GS ++ + + L R ++R + ++E++
Sbjct: 1475 ASDLHSSSISAEARRTMLLGSLVLIGASLAVALLSLWLVNRNLVRPVQRLIEHIAQLSHG 1654
Query: 152 ETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKI 211
+ E + K+ + A + + ++ + R +++ L + S M
Sbjct: 1655 DFGERIEIRRKDELGKLALAANTLRDFLVDIFDRLRRS--TRDLDSASGSLNAIASLMAA 1828
Query: 212 FVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALA 271
+ S+ + A++ + T ++++ + R + D A + + M+ +
Sbjct: 1829 GTREQFSRTDQVATAMQEMSATAQEVARYAGDAARAAD----EADDSAQRGEDVMEETIR 1996
Query: 272 SIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQM 331
SI + D + IRQ+ ++G++G++ I G + +
Sbjct: 1997 SIGEMRKEI------------DHTVEVIRQLESDSGRIGKVLD-----VIRGIAEQTNLL 2125
Query: 332 TDQVADLRAR----GQGASPVA----------MQKAQQVSQGLDVLTAKVENAARKLEAM 377
A AR G+G + VA + ++ Q +D + NAAR +E+
Sbjct: 2126 ALNAAIEAARAGDAGRGFAVVADEVRTLAQRTAESIAEIHQIIDTVQNGAVNAARAIESG 2305
Query: 378 TNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGE 437
+ ++ A+++ A L E + +A A + + ++I R+L E
Sbjct: 2306 QSRSEAGAEQVANAGAMLRQITASVESIRDMNRQIATAAE-----EQTAVAEEISRNLTE 2470
Query: 438 IAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQ 474
IA++ S + Q + S + L+ Q+ ALQ L+
Sbjct: 2471 IASIASSNQEQVEQTEAASRDLHGLSAQLGDALQRLR 2581
>gb|AF317887.1|AF317887 Homo sapiens monoclonal antibody 3H11 antigen mRNA, complete cds
Length = 2156
Score = 38.5 bits (88), Expect = 3.8
Identities = 78/347 (22%), Positives = 140/347 (39%), Gaps = 4/347 (1%)
Frame = +3
Query: 162 KNLGPGMTKMAKMIDE--RQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSK 219
KNL + +M KM DE R + + HQ V ++ + + + + + + +KN +
Sbjct: 633 KNLEESVQEMEKMTDEYNRMKAIVHQTDNV--IDQLKKENDHYQLQVQELTDLLKSKNEE 806
Query: 220 NQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMK--RALASIDSKL 277
+ I A+ +A++ E +L +SKD E ++ + L ++ KL
Sbjct: 807 DDPIMVAV----------NAKVEEWKLIL----------SSKDDEIIEYQQMLHNLREKL 926
Query: 278 NQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVAD 337
A+ D + S A +Q I++ + + E + TC + + + +
Sbjct: 927 KNAQ---LDADKSNVMALQQGIQERDSQIKMLTEQVEQYTKEMEKNTC-----IIEDLKN 1082
Query: 338 LRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLAD 397
R +GAS ++ Q ++ LD+L K + A R E + K++ A L D
Sbjct: 1083ELQRNKGASTLSQQTHMKIQSTLDILKEKTKEAERTAELAEADAREKDKELVEALKRLKD 1262
Query: 398 PNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSP 457
G G E A+ E I + K RD EI LT ++ L +
Sbjct: 1263YESGVYGLED---AVVE---IKNCKNQIKIRD------REIEILTKEINKLELKISDFPD 1406
Query: 458 EARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWI 504
E AL ++V L+ KT + R +K HL+ + +A+ I
Sbjct: 1407ENEALRERV-----GLEPKTMIDLTEFRNSK---HLKQQQYRAENQI 1523
>gb|U29585.1|SPU29585 Streptococcus pyogenes emm18.1 gene, complete cds
Length = 1332
Score = 38.5 bits (88), Expect = 3.8
Identities = 86/413 (20%), Positives = 171/413 (40%), Gaps = 10/413 (2%)
Frame = +1
Query: 213 VTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDED-----AWASKDTEAMK 267
+T +N K + +E L N ++ ++ + R +L S E+ A A E +
Sbjct: 208 LTVENKKLKTDKEQLTKENDDLKTEKDQLEQ--RSEKLASQKENLEKEVAEAKHKNETLN 381
Query: 268 RALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKM 327
+ KLN+ + L + + E+ + ++L++ K ++ ++ ++ G K
Sbjct: 382 INNDDLTKKLNETRQELANKQQESKE-NEKTLNELLEKTVK-DKIAREQKSKQDFGALKQ 555
Query: 328 -LGQMTDQ--VADLRARGQGASPVAMQKAQ-QVSQGLDVLTAKVENAARKLEAMTNSKQS 383
L + +Q +++ +G A ++A+ QV + L LTA+++ + + S+Q
Sbjct: 556 ELAKKEEQNKISEASRKGLRRDLDASREAKKQVEKDLANLTAELDKVKEEKQISDASRQG 735
Query: 384 IAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTS 443
+ + +DA++ E ++Q+ LA AEL D KE I
Sbjct: 736 LRRDLDASR----------EAKKQVEKDLANLT--AEL-DKVKEEKQI------------ 840
Query: 444 KLGDLRRQG-KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQR 502
D RQG + D +R KQV AL+ ANS+ A A L ++E++++
Sbjct: 841 --SDASRQGLRRDLDASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEESKK 984
Query: 503 WIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXXXXXXRG 562
+ + + +A + L + + A + + K G
Sbjct: 985 LTEKEKAELQAKLEAEAKALKEQLAKQAEELAKLRAE----KASDSQTPDAKPGNKAVPG 1152
Query: 563 EGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
+G++PQA +Q + +K+ K Q+ T E ++ F T + ++A A A
Sbjct: 1153KGQAPQAGTKPNQNKAPMKETKRQLPS--TGEAANPFF-TAAALTVMATAGVA 1302
>ref|NM_061137.1| Caenorhabditis elegans
Length = 855
Score = 38.5 bits (88), Expect = 3.8
Identities = 42/230 (18%), Positives = 94/230 (40%), Gaps = 5/230 (2%)
Frame = +1
Query: 372 RKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKER--- 428
+K++AM K + + DAA EE++R + ++ E D +++
Sbjct: 16 KKMQAMKIEKDNALDRADAA-------------EEKVRQITEKLERVEEELRDTQKKMTQ 156
Query: 429 --DDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVANSRP 486
DD+ ++ +++A TSKL + + + E +L +++ + L+ R +
Sbjct: 157 TGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEK 336
Query: 487 AKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCD 546
+ A H + E+ ++ ++N ++ D + + E LA Y ++ K
Sbjct: 337 LEEATHNVDESERVRKVMENRSLQDEERAN-TVEAQLKEAQLLAEEADRKY-DEVARKLA 510
Query: 547 RVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVS 596
V GE + + + ++LK L+ ++A+ +E S
Sbjct: 511 MVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDS 660
>ref|NM_061136.1| Caenorhabditis elegans
Length = 855
Score = 38.5 bits (88), Expect = 3.8
Identities = 42/230 (18%), Positives = 94/230 (40%), Gaps = 5/230 (2%)
Frame = +1
Query: 372 RKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAELCDDPKER--- 428
+K++AM K + + DAA EE++R + ++ E D +++
Sbjct: 16 KKMQAMKIEKDNALDRADAA-------------EEKVRQITEKLERVEEELRDTQKKMTQ 156
Query: 429 --DDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRAVANSRP 486
DD+ ++ +++A TSKL + + + E +L +++ + L+ R +
Sbjct: 157 TGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEK 336
Query: 487 AKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQDLLAKCD 546
+ A H + E+ ++ ++N ++ D + + E LA Y ++ K
Sbjct: 337 LEEATHNVDESERVRKVMENRSLQDEERAN-TVEAQLKEAQLLAEEADRKY-DEVARKLA 510
Query: 547 RVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVS 596
V GE + + + ++LK L+ ++A+ +E S
Sbjct: 511 MVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDS 660
>ref|NM_025114.1| Homo sapiens hypothetical protein FLJ13615 (FLJ13615), mRNA
Length = 2719
Score = 38.1 bits (87), Expect = 5.0
Identities = 78/347 (22%), Positives = 140/347 (39%), Gaps = 4/347 (1%)
Frame = +3
Query: 162 KNLGPGMTKMAKMIDE--RQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSK 219
KNL + +M KM DE R + + HQ V ++ + + + + + + +KN +
Sbjct: 1065 KNLEESVQEMEKMTDEYNRMKAIVHQTDNV--IDQLKKENDHYQLQVQELTDLLKSKNEE 1238
Query: 220 NQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMK--RALASIDSKL 277
+ I A+ +A++ E +L +SKD E ++ + L ++ KL
Sbjct: 1239 DDPIMVAV----------NAKVEEWKLIL----------SSKDDEIIEYQQMLHNLREKL 1358
Query: 278 NQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVAD 337
A+ D + S A +Q I++ + + E + TC + + + +
Sbjct: 1359 KNAQ---LDADKSNVMALQQGIQERDSQIKMLTEQVEQYTKEMEKNTC-----IIEDLKN 1514
Query: 338 LRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLAD 397
R +GAS ++ Q ++ LD+L K + A R E + K++ A L D
Sbjct: 1515 ELQRNKGASTLSQQTHMKIQSTLDILKEKTKEAERTAELAEADAREKDKELVEALKRLKD 1694
Query: 398 PNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSP 457
G G E A+ E I + K RD EI LT ++ L +
Sbjct: 1695 YESGVYGLED---AVVE---IKNCKNQIKIRD------REIEILTKEINKLELKISDFLD 1838
Query: 458 EARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWI 504
E AL ++V L+ KT + R +K HL+ + +A+ I
Sbjct: 1839 ENEALRERV-----GLEPKTMIDLTEFRNSK---HLKQQQYRAENQI 1955
>dbj|AK023677.1|AK023677 Homo sapiens cDNA FLJ13615 fis, clone PLACE1010896, weakly similar to
NUF1 PROTEIN
Length = 2719
Score = 38.1 bits (87), Expect = 5.0
Identities = 78/347 (22%), Positives = 140/347 (39%), Gaps = 4/347 (1%)
Frame = +3
Query: 162 KNLGPGMTKMAKMIDE--RQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSK 219
KNL + +M KM DE R + + HQ V ++ + + + + + + +KN +
Sbjct: 1065 KNLEESVQEMEKMTDEYNRMKAIVHQTDNV--IDQLKKENDHYQLQVQELTDLLKSKNEE 1238
Query: 220 NQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMK--RALASIDSKL 277
+ I A+ +A++ E +L +SKD E ++ + L ++ KL
Sbjct: 1239 DDPIMVAV----------NAKVEEWKLIL----------SSKDDEIIEYQQMLHNLREKL 1358
Query: 278 NQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVAD 337
A+ D + S A +Q I++ + + E + TC + + + +
Sbjct: 1359 KNAQ---LDADKSNVMALQQGIQERDSQIKMLTEQVEQYTKEMEKNTC-----IIEDLKN 1514
Query: 338 LRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLAD 397
R +GAS ++ Q ++ LD+L K + A R E + K++ A L D
Sbjct: 1515 ELQRNKGASTLSQQTHMKIQSTLDILKEKTKEAERTAELAEADAREKDKELVEALKRLKD 1694
Query: 398 PNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSP 457
G G E A+ E I + K RD EI LT ++ L +
Sbjct: 1695 YESGVYGLED---AVVE---IKNCKNQIKIRD------REIEILTKEINKLELKISDFLD 1838
Query: 458 EARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWI 504
E AL ++V L+ KT + R +K HL+ + +A+ I
Sbjct: 1839 ENEALRERV-----GLEPKTMIDLTEFRNSK---HLKQQQYRAENQI 1955
>gb|M19932.1|BABBMYHA Baboon beta-myosin heavy-chain mRNA, partial cds
Length = 881
Score = 38.1 bits (87), Expect = 5.0
Identities = 60/277 (21%), Positives = 112/277 (39%), Gaps = 3/277 (1%)
Frame = +1
Query: 179 QQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMS 238
+QEL RV L++S NT LI+ K + +EEA++ EK
Sbjct: 34 EQELIETSERVQLLHSQNTS------LINQKKKMDADLSQLQTEVEEAVQECRNAEEKAK 195
Query: 239 AEINEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQA 298
I + + + ++D S E MK+ + EQ
Sbjct: 196 KAITDAAMMAEELKKEQDT--SAHLERMKKNM-------------------------EQT 294
Query: 299 IRQI---LDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQ 355
I+ + LDEA ++ L GK++ + K+ ++ + +L A Q + +++ ++
Sbjct: 295 IKDLQHRLDEAEQIA-LKGGKKQLQ-----KLEARVRELENELEAE-QKRNAESVKGMRK 453
Query: 356 VSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEA 415
+ + LT + E + L + + + K+ A + E EEQ L++
Sbjct: 454 SERRIKELTYQTEEDRKNLLRLQDLVDKLQLKVKAYKRQ------AEEAEEQANTNLSKF 615
Query: 416 RKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG 452
RK+ D+ +ER DI S ++ L +K D+ +G
Sbjct: 616 RKVQHELDEAEERADIAES--QVNKLRAKSRDIGTKG 720
>ref|NM_073088.1| Caenorhabditis elegans
Length = 3888
Score = 37.7 bits (86), Expect = 6.5
Identities = 79/384 (20%), Positives = 166/384 (42%), Gaps = 21/384 (5%)
Frame = +1
Query: 139 KGILEYLTVAEVV--ETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVML-VNSM 195
+ + E L A+++ E +++L + GM ++ K ++ + ++ +E ++ V+
Sbjct: 2683 ENVKEELIGAKIMNKEMVDELNAKLGDALEGMEELKKSLEVSEAKVQRREEELIAQVSKH 2862
Query: 196 NTVKELLPVLISAMKIFV-TTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTS-- 252
+E L + + +K +T+ S++Q E A + +E++ A I+ + LQ
Sbjct: 2863 RDQQEQLQLTLDELKSAQHSTETSRSQSNELAAR-----IEELEASISFAQKALQDVEDV 3027
Query: 253 -WDEDAWASKDTEAMKRAL-------ASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILD 304
+D S+ EAM + S+ ++ NQ ++ Q ++I+
Sbjct: 3028 KHQQDIQISEANEAMVKLKQDFETERTSLQNEFNQTVSADKEQLGHAEQMIAQKEKEIIT 3207
Query: 305 EAGKVGELCAG-KERREILGTCKM----LGQMTDQVADLRARGQGASPVAMQKAQQVSQG 359
++ + +ER E K +G +T+ ++ L+ V +Q+ +
Sbjct: 3208 LQARIEAMSQQFEERLEASNVWKTQAMNVGTLTESLSQLQ--------VQLQQMNEKLVA 3363
Query: 360 LDVLTAKVENAARK-LEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKI 418
D +VE A+ + + K + ++ A + +A E EEQ+ A E ++
Sbjct: 3364 SDKYAVEVEQQAQHDITVIQEEKNEQSAALEEALSKIA------ELEEQLGRAQKEIVRL 3525
Query: 419 AELCDDPKERDDILRSLGE-IAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKT 477
++CDD DD+ R L + I+ L S++ L+ G P+ L +Q ++ L
Sbjct: 3526 EKVCDD---FDDVERELKDAISKLQSEIKQLK--GIKKPPKVMGLLQQARLGVKPL---- 3678
Query: 478 NRAVANSRPAKAAVHLEGKIEQAQ 501
+R +++ P + V E K E AQ
Sbjct: 3679 SREHSHAEPPEPVV--EDKFEDAQ 3744
>gb|AC008067.3|AC008067 Homo sapiens BAC clone RP11-303I4 from 2, complete sequence
Length = 151242
Score = 37.7 bits (86), Expect = 6.5
Identities = 17/37 (45%), Positives = 22/37 (58%)
Frame = +1
Query: 904 QLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGG 940
+L E KW GNDII AK+M ++M EM+ R G
Sbjct: 12382 KLDAEVAKWDDSGNDIIVLAKQMCMIMMEMTDFTR*G 12492
>emb|AL607023.3|AL607023 Human DNA sequence from clone RP11-65E10 on chromosome 10, complete
sequence [Homo sapiens]
Length = 132396
Score = 37.7 bits (86), Expect = 6.5
Identities = 22/58 (37%), Positives = 32/58 (54%)
Frame = -1
Query: 583 LKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRL 640
+ +Q+++A+ VSD F DTT P+ +L AA RE+ E AA F H+ RL
Sbjct: 35796 ISSQLRKAIIDHVSDSFLDTTVPLLVLIEAA-----KNGREKEIKEYAAIFHEHTSRL 35638
>emb|AL662833.4| Human DNA sequence from clone XXbac-101P6 on chromosome 6, complete
sequence [Homo sapiens]
Length = 168887
Score = 37.4 bits (85), Expect = 8.5
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = +3
Query: 289 ASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQG 344
ASP G ++RQ GK EL RREILG C M + T+++A+ G G
Sbjct: 19518 ASPRPGGSSSLRQ----PGKTCELIRKSGRREILGRCPMARKRTNELANRERHGGG 19673
>gb|AC004195.1|AC004195 Homo sapiens clone UWGC:y24c027 from 6p21, complete sequence
Length = 40878
Score = 37.4 bits (85), Expect = 8.5
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = -2
Query: 289 ASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQG 344
ASP G ++RQ GK EL RREILG C M + T+++A+ G G
Sbjct: 7049 ASPRPGGSSSLRQ----PGKTCELIRKSGRREILGRCPMARKRTNELANRERHGGG 6894
>emb|X72090.1|SPEMM55 S.pyogenes emm55 gene for M-protein
Length = 1653
Score = 37.4 bits (85), Expect = 8.5
Identities = 95/479 (19%), Positives = 179/479 (36%), Gaps = 23/479 (4%)
Frame = +1
Query: 160 YTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSK 219
Y + G G+ K+A + E RV L + ++ +K++ L + K+ T + K
Sbjct: 328 YNELSGDGVKKLAASL---------MEERVALRDEIDQIKKISEELKN--KLRATEEELK 474
Query: 220 NQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWA---SKDTEAMKRALASIDSK 276
N+ E L++ + V+ E E ++ + L D++ A + + K L + +
Sbjct: 475 NKKEERELEHAAYAVDAKKHE--EYVKSMSLALMDKEESAHLLEQSLDTAKAELVKKEQE 648
Query: 277 LNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVA 336
L KG L D E+ + +E K E +I + ++T +A
Sbjct: 649 LQLVKGNL--------DQKEKELEN--EELAK--ESAISDLTEQITAKKAEVEKLTQDLA 792
Query: 337 DLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLA 396
A Q ++ + KVE ++L + + + A++ +A
Sbjct: 793 AKSAEIQEKEAEKDRQQHMYEAFMSQYKEKVEKQEQELAKLKQLETINNNLLGNAKDMIA 972
Query: 397 DPNGGPEGEEQIRGALAEARKIAELCDDPKERD---------DILRSLGEIAALTSK--- 444
+ E + L E KI+E RD + + L + A K
Sbjct: 973 KLSAENEQLASDKAKLEEQNKISEASRKGLRRDLDASREAKKQVEKDLANLTAELDKVKE 1152
Query: 445 ---LGDLRRQG-KGDSPEARALAKQVATALQNLQTKTNRAVANSRPAKAAVHLEGKIEQA 500
+ D R+G + D +R KQV AL+ ANS+ A A L ++E++
Sbjct: 1153DKQISDASRKGLRRDLDASREAKKQVEKALEE---------ANSKLA-ALEKLNKELEES 1302
Query: 501 QRWIDNPTVDDRGVGQAAIRGL----VAEGHRLANVMMGPYRQDLLAKCDRVXXXXXXXX 556
++ + + + +A + L + LA + G K
Sbjct: 1303KKLTEKEKAELQAKLEAEAKTLKEKLAKQAEELAKLRAG--------KASDSQTPDAKPG 1458
Query: 557 XXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFSDTTTPIKLLAVAATA 615
G+G++PQA +Q + +K+ K Q+ T E ++ F T + ++A A A
Sbjct: 1459NKAVPGKGQAPQAGTKPNQNKAPMKETKRQLPS--TGETANPFF-TAAALTVMATAGVA 1626
>gb|AE006624.1|AE006624 Streptococcus pyogenes M1 GAS strain SF370, section 153 of 167 of the
complete genome
Length = 12928
Score = 37.4 bits (85), Expect = 8.5
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Frame = -2
Query: 699 KNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIA- 757
K Q ++ +T +D+ + K + DAS + +++DLD + A ++ + A + A
Sbjct: 1998 KKQVEKDLANLTAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEEANSKLAAL 1819
Query: 758 RRANRILLVAKREVENSE---DPKFREAVKAASDELSKTISPMVMDAKAVAGNISD 810
+ N+ L +K+ E + K KA ++L+K + AK AG SD
Sbjct: 1818 EKLNKELEESKKLTEKEKAELQAKLEAEAKALKEQLAKQAEEL---AKLRAGKASD 1660
>gb|U65899.1|SPU65899 Streptococcus pyogenes M protein gene, partial cds
Length = 624
Score = 37.4 bits (85), Expect = 8.5
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Frame = +1
Query: 699 KNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIA- 757
K Q ++ +T +D+ + K + DAS + +++DLD + A ++ + A + A
Sbjct: 64 KRQVEKDLANLTAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEEANSKLAAL 243
Query: 758 RRANRILLVAKREVENSE---DPKFREAVKAASDELSKTISPMVMDAKAVAGNISD 810
+ N+ L +K+ E + K KA ++L+K + AK AG SD
Sbjct: 244 EKLNKELEESKKLTEKEKAELQAKLEAEAKALKEQLAKQAEEL---AKLRAGKASD 402
>emb|AJ278733.1|MMU278733 Mus musculus partial mRNA for myosin heavy chain IIB (MYHC-IIB gene)
Length = 1679
Score = 37.4 bits (85), Expect = 8.5
Identities = 57/254 (22%), Positives = 99/254 (38%), Gaps = 43/254 (16%)
Frame = +3
Query: 224 EEALKNRNFTVEK----MSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALA-------- 271
++ LK + VE+ M AEI E+ L+ T + +A +R
Sbjct: 756 QDDLKEQLAMVERRANLMQAEIEELRASLEQTERSRRVAEQELLDASERVQLLHTQNTSL 935
Query: 272 -----SIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCK 326
+++ ++Q +G + D +A E+A + I D A EL KE+ +
Sbjct: 936 INTKKKLETDISQIQGEMEDIVQEARNAEEKAKKAITDAAMMAEEL--KKEQDTSAHLER 1109
Query: 327 MLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAA--------------- 371
M M V DL+ R A +A++ ++ Q L+ ++EN
Sbjct: 1110 MKKNMEQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVRELENEVENEQKRNIEAVKGLR 1289
Query: 372 ---RKLEAMTNSKQSIAKKIDAAQNWL--------ADPNGGPEGEEQIRGALAEARKIAE 420
R+++ +T + K + Q+ + A E EEQ LA+ RKI
Sbjct: 1290 KHERRVKELTYQTEEDRKNVLRLQDLVDKLQTKVKAYKRQAEEAEEQSNVNLAKFRKIQH 1469
Query: 421 LCDDPKERDDILRS 434
++ +ER DI S
Sbjct: 1470 ELEEAEERADIAES 1511
>dbj|AP000509.1|AP000509 Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region,
section 8/20
Length = 100000
Score = 37.4 bits (85), Expect = 8.5
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = -2
Query: 289 ASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQG 344
ASP G ++RQ GK EL RREILG C M + T+++A+ G G
Sbjct: 83706 ASPRPGGSSSLRQ----PGKTCELIRKSGRREILGRCPMARKRTNELANRERHGGG 83551
>dbj|AB023059.1|AB023059 Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region,
clone:TY1G9, complete sequence
Length = 27494
Score = 37.4 bits (85), Expect = 8.5
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = -2
Query: 289 ASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQG 344
ASP G ++RQ GK EL RREILG C M + T+++A+ G G
Sbjct: 18061 ASPRPGGSSSLRQ----PGKTCELIRKSGRREILGRCPMARKRTNELANRERHGGG 17906
>ref|NM_065305.1| Caenorhabditis elegans
Length = 3402
Score = 37.4 bits (85), Expect = 8.5
Identities = 76/422 (18%), Positives = 170/422 (40%), Gaps = 15/422 (3%)
Frame = +1
Query: 191 LVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQL 250
L +S ++KE +I AMKI + + E LK + VEK +++ ++L
Sbjct: 541 LDSSETSLKEFSD-MIEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLE 717
Query: 251 TSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQIL--DEAGK 308
++ E ++ E +K+ L S + N E+ ++ L DE+
Sbjct: 718 STTSEMKQHAEAAEIVKKQLEEAQSSIE---------NLKKDAENERNLKTALESDESSA 870
Query: 309 VGELCAGKE--RREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAK 366
+ E+ E ++E+ + K ++ +Q+ L Q + Q++ + ++ AK
Sbjct: 871 ISEITKQMEAAKKELEASEKEKSELREQMDRL----QKVHNAGQEDIQKLQKTWELEMAK 1038
Query: 367 VENAARKLEAMTNSKQSIAKKIDAAQNWL-ADPNGGPEGEEQIRGALAEARKIAELCDDP 425
+ A+ E +++ +A +++ A+ L G ++ +GAL +A K ++ +
Sbjct: 1039I---AKSTEDEKLAREQLAGELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQ 1209
Query: 426 KER-DDILRSLGEIAA---------LTSKLGDLRRQGKGDSPEARALAKQVATALQNLQT 475
ER L S E+A+ L +L + +++ + A + + + L+N +
Sbjct: 1210LERAQSALESSQELASSQKADKIQELEKELQNAQKRSSEELETANEMVRSLTATLENSNS 1389
Query: 476 KTNRAVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMG 535
+T K + K QA++ + ++ V ++ + ++ N+
Sbjct: 1390ET-------EILKQKLETLDKELQARQQTEKALTEEINVLTTSLAEKEQQTAQIQNLQTQ 1548
Query: 536 PYRQDLLAKCDRVXXXXXXXXXXXXRGEGESPQARALASQLQDSLKDLKAQMQEAMTQEV 595
Y+ + + K ++V RA QL+ LK ++ EA+ +
Sbjct: 1549IYQME-VEKEEKVELVKVQLQQAAQSSSSAEEALRAEIEQLEAKLKAVEQAKAEALNSLL 1725
Query: 596 SD 597
++
Sbjct: 1726AE 1731
>ref|XM_087932.1| Homo sapiens hypothetical gene supported by AK056834 (LOC154567),
mRNA
Length = 2784
Score = 37.4 bits (85), Expect = 8.5
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = +3
Query: 289 ASPGDAGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQG 344
ASP G ++RQ GK EL RREILG C M + T+++A+ G G
Sbjct: 18 ASPRPGGSSSLRQ----PGKTCELIRKSGRREILGRCPMARKRTNELANRERHGGG 173
>ref|XM_045378.2| Homo sapiens hypothetical protein FLJ14957 (FLJ14957), mRNA
Length = 7152
Score = 37.4 bits (85), Expect = 8.5
Identities = 65/339 (19%), Positives = 129/339 (37%), Gaps = 25/339 (7%)
Frame = +1
Query: 193 NSMNTVKELLP------VLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIR 246
NS + VK+LL + ++ ++ + + Q I+E + +E++ ++ NE +
Sbjct: 1825 NSTSEVKDLLEQKSKLTIEVAELQRQLQLEVKNQQNIKEERERMRANLEELRSQHNEKVE 2004
Query: 247 ---VLQLTSWDEDAWASKDTEAM----------KRALASIDSKLNQAKGWLRDPNASPGD 293
LQ + + K+ E + + + + +L++ L S
Sbjct: 2005 ENSTLQQRLEESEGELRKNLEELFQVKMEREQHQTEIRDLQDQLSEMHDELDSAKRSEDR 2184
Query: 294 AGEQAIRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKA 353
I ++L + +L KE +E L K ++T L+ +
Sbjct: 2185 EKGALIEELLQAKQDLQDLLIAKEEQEDL-LRKRERELTALKGALKEEVSSHDQEMDKLK 2361
Query: 354 QQVSQGLDVLTAKVENAARKLEAM---TNSKQSIAKKIDAAQNWLADPNGGPEG--EEQI 408
+Q L L VE A + +E + +N+ + + L + N +G EE
Sbjct: 2362 EQYDAELQALRESVEEATKNVEVLASRSNTSEQDQAGTEMRVKLLQEENEKLQGRSEELE 2541
Query: 409 RGALAEARKIAELC-DDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVA 467
R R+I +L D+ K ++ + + GEI L L R++ K RAL ++
Sbjct: 2542 RRVAQLQRQIEDLKGDEAKAKETLKKYEGEIRQLEEALVHARKEEKEAVSARRALENELE 2721
Query: 468 TALQNLQTKTNRAVANSRPAKAAVHLEGKIEQAQRWIDN 506
A NL T S K + ++ + + ++N
Sbjct: 2722 AAQGNLSQTTQEQKQLSEKLKEESEQKEQLRRLKNEMEN 2838
>emb|AJ243770.1|PFO243770 Paracirrhites forsteri mRNA for fast myosin heavy chain (MyoHC-T54
gene)
Length = 5997
Score = 37.4 bits (85), Expect = 8.5
Identities = 93/486 (19%), Positives = 188/486 (38%), Gaps = 45/486 (9%)
Frame = +1
Query: 18 QQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQTTEDQILKRDMPPA 77
+ + HL M E + + I DLT + ++ L + K+TV+T + +I + + A
Sbjct: 4558 EALDHLETMKRENKNLQQEISDLTEQIGETGKSIHELEKA-KKTVETEKTEI-QSALEEA 4731
Query: 78 FIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRV 137
+E+ K+++ L + G D + + E+ +I R
Sbjct: 4732 EGTLEHEEAKILRVQLELNQ------------------IKGEVDRKMAEKDEEMEQIKRN 4857
Query: 138 CKGILEYL--TVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSM 195
+ +++ + T+ V + D + K + + +M + ++ + E + L N
Sbjct: 4858 SQRVIDSMQSTLDSEVRSRNDALRVKKKMEGDLNEMEIQLSHANRQAS--EAQKQLRNVQ 5031
Query: 196 NTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEK----MSAEINEIIRVLQLT 251
+K+ L A++ +E +K + VE+ M AEI+E+ L+ T
Sbjct: 5032 GQLKDAQLHLDDAVRG------------QEDMKEQVAMVERRNGLMMAEIDELRVALEQT 5175
Query: 252 SWDEDAWASKDTEAMKRA-------------LASIDSKLNQAKGWLRDPNASPGDAGEQA 298
+ +A +R +++ L Q +G + D +A ++A
Sbjct: 5176 ERGRKVAEQELVDASERVGLLHSQNTSLMNTKKKLEADLVQVQGEVDDTVQEARNAEDKA 5355
Query: 299 IRQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQ 358
+ I D A EL ++ L K ++T V DL+ R A +AM+ ++ Q
Sbjct: 5356 KKAITDAAMMAEELKKEQDTSAHLERMKKNLEVT--VKDLQHRLDEAENLAMKGGKKQLQ 5529
Query: 359 GLDVLTAKVENAA------------------RKLEAMTNSKQSIAKKIDAAQNWL----- 395
L+ ++E+ R+++ +T + K ++ Q+ +
Sbjct: 5530 KLESRVRELESEVEAEQRRGADAVKGVRKYERRVKELTYQTEEDKKNVNRLQDLVDKLQL 5709
Query: 396 ---ADPNGGPEGEEQIRGALAEARKIAELCDDPKERDDILRSLGEIAALTSKLGDLRRQG 452
+ E EEQ ++ RK+ ++ +ER DI S ++ L +K R G
Sbjct: 5710 KVKSYKRQSEEAEEQANTHMSRLRKVQHELEEAQERADIAES--QVNKLRAK---SRETG 5874
Query: 453 KGDSPE 458
K D E
Sbjct: 5875 KTDLAE 5892
>dbj|AP001508.1|AP001508 Bacillus halodurans genomic DNA, section 2/14
Length = 296950
Score = 37.4 bits (85), Expect = 8.5
Identities = 38/194 (19%), Positives = 85/194 (43%), Gaps = 5/194 (2%)
Frame = -3
Query: 263 TEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIRQILDEAGKVGELCAGKERREIL 322
T MK+ L + + L A D + D + + + ++ E R ++
Sbjct: 153353 TRRMKKRLTVVTAALEAAGNG--DFTTAIKDTNGDELSVVAESYNRMAEKLQDTLHR-MV 153183
Query: 323 GTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGLDVLTAKVENAARKLEAMTNSKQ 382
+ + ++Q+ + A+ + QQV++G + +A VE+A++ LEAM S
Sbjct: 153182 DSANQVASSSEQLTASAEQTSQATETITEAIQQVAEGSEKASASVEDASQSLEAMAMSVH 153003
Query: 383 SIAKKIDAAQNWLADPNG-GPEGEEQIRGALAEARKIAELCDDPKERDDILRSLG----E 437
+I++ + + + G +GE ++ + ++I + +E ++++SL E
Sbjct: 153002 AISENANGISDISSQAIGKAKDGEVLVQQTV---KQIQAINRSVEESGEVIKSLDTRSKE 152832
Query: 438 IAALTSKLGDLRRQ 451
I +TS + + Q
Sbjct: 152831 IGNITSVIASISEQ 152790
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 18, 2002 12:08 AM
Number of letters in database: 576,412,323
Number of sequences in database: 1,174,033
Lambda K H
0.314 0.128 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,968,863,393
Number of Sequences: 1174033
Number of extensions: 41023297
Number of successful extensions: 127591
Number of sequences better than 10.0: 328
Number of HSP's better than 10.0 without gapping: 20586
Number of HSP's successfully gapped in prelim test: 7015
Number of HSP's that attempted gapping in prelim test: 96991
Number of HSP's gapped (non-prelim): 50772
length of query: 1066
length of database: 1,623,793,206
effective HSP length: 146
effective length of query: 920
effective length of database: 1,452,384,388
effective search space: 1336193636960
effective search space used: 1336193636960
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 84 (37.0 bits)