TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(906 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,164,257 sequences; 587,334,133 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_007683.1| Mus musculus centromere autoantigen C (Cen... 1663 0.0
gb|U03113.1|MMCENPC Mus musculus Swiss centromeric protein ... 1663 0.0
dbj|AK011004.1|AK011004 Mus musculus 13 days embryo liver c... 792 0.0
ref|XM_084163.1| Homo sapiens centromere protein C 1 (CENPC... 707 0.0
ref|NM_001812.1| Homo sapiens centromere protein C 1 (CENPC... 707 0.0
gb|M95724.1|HUMCENPRO H.sapiens centromere autoantigen C (C... 707 0.0
gb|AC010201.18| Homo sapiens 12 BAC RP11-1109F11 (Roswell P... 307 e-129
ref|XM_017019.2| Homo sapiens similar to centromere protein... 307 e-129
gb|U35657.1|OAU35657 Ovis aries centromere protein C (CENP-... 317 5e-84
dbj|AB004650.1|AB004650 Chicken mRNA for CENP-C, clone CENP... 191 2e-46
dbj|AB004649.1|AB004649 Gallus gallus mRNA for CENP-C, comp... 189 1e-45
gb|AC104806.3| Homo sapiens chromosome 4 clone RP11-584P21,... 125 3e-26
gb|L30105.1|MUSCENP Mus musculus (clone xs72) Cenpc pseudog... 108 3e-25
dbj|AB042324.1|AB042324 Gallus gallus CENP-C gene for centr... 65 4e-08
dbj|AK020042.1|AK020042 Mus musculus 13 days embryo forelim... 52 4e-04
emb|X88927.1|XLNOPP180 X.laevis mRNA for xNopp180 51 5e-04
ref|NM_022869.1| Rattus norvegicus nucleolar phosphoprotein... 48 0.004
gb|M94287.1|RATNOP140A Rattus norvegicus nucleolar phosphop... 48 0.004
dbj|AP002057.1|AP002057 Arabidopsis thaliana genomic DNA, c... 47 0.009
ref|NM_113798.1| Arabidopsis thaliana chromosome 3 CHR3v12... 47 0.009
ref|NM_101434.1| Arabidopsis thaliana chromosome 1 CHR1v12... 47 0.012
gb|M94288.1|RATNOP140B Rattus norvegicus nucleolar phosphop... 46 0.020
gb|AY052127.1| Drosophila melanogaster SD07741 full length ... 46 0.020
gb|U33058.1|CEU33058 Caenorhabditis elegans UNC-89 (unc-89)... 45 0.026
gb|AF003131.1| Caenorhabditis elegans cosmid C09D1, complet... 45 0.026
ref|NM_059022.1| helicase 45 0.034
gb|AF134186.1|AF134186 Caenorhabditis elegans XNP-1 (xnp-1)... 45 0.034
ref|NM_058889.1| immunoglobin-like protein 43 0.17
ref|NM_120839.1| Arabidopsis thaliana chromosome 5 CHR5v12... 43 0.17
gb|AF129857.2|AF129857 Zea mays CENPCA protein (CenpcA) mRN... 43 0.17
emb|AL109834.1|SPBC1861 S.pombe chromosome II cosmid c1861 42 0.22
emb|Z18294.1|SCMIF2A Saccharomyces cerevisiae of MIF2 gene 42 0.22
emb|Z28089.1|SCYKL089W S.cerevisiae chromosome XI reading f... 42 0.22
gb|AF129859.1|AF129859 Zea mays CENPCC protein (CenpcC) mRN... 42 0.29
gb|AF129858.1|AF129858 Zea mays CENPCB protein (CenpcB) mRN... 42 0.29
emb|Z69728.1|SPAC56F8 S.pombe chromosome I cosmid c56F8 42 0.37
emb|AL353012.1|SPBC1711 S.pombe chromosome II cosmid c1711 41 0.49
gb|AC073883.32| Mus musculus chromosome 3 clone rp23-71e13,... 41 0.49
gb|K02113.1|CHKVITB Gallus gallus vitellogenin gene coding ... 41 0.49
emb|X13607.1|GGVITIIG Chicken vitellogenin II gene 41 0.49
emb|AL114081.1|CNS01BD5 Botrytis cinerea strain T4 cDNA lib... 41 0.64
emb|AL117078.1|CNS01DOE Botrytis cinerea strain T4 cDNA lib... 40 0.83
gb|AE001337.1|AE001337 Chlamydia trachomatis section 64 of ... 40 0.83
emb|AL112778.1|CNS01ACY Botrytis cinerea strain T4 cDNA lib... 40 1.1
gb|AC093196.1| Drosophila melanogaster, chromosome 2L, regi... 40 1.1
emb|AL117024.1|CNS01DMW Botrytis cinerea strain T4 cDNA lib... 40 1.1
gb|M18060.1|CHKVITC Chicken vitellogenin gene, complete cds 40 1.1
gb|M87306.1|TETMIHILIN Tetrahymena thermophila micronuclear... 40 1.4
ref|NM_113278.1| Arabidopsis thaliana chromosome 3 CHR3v12... 40 1.4
gb|AF154031.1|AF154031 Streptococcus pneumoniae strain g48s... 40 1.4
gb|AC008216.3|AC008216 Drosophila melanogaster, chromosome ... 40 1.4
gb|AE003759.1|AE003759 Drosophila melanogaster genomic scaf... 40 1.4
emb|AL445883.3|CNS07EEQ Human chromosome 14 DNA sequence BA... 39 1.9
emb|AL355885.4|CNS05TCW Human chromosome 14 DNA sequence BA... 39 1.9
emb|AL033534.1|SPBC215 S.pombe chromosome II cosmid c215 39 2.4
emb|X16421.1|EFPF54 E.faecium DNA encoding P54 protein 39 2.4
gb|AY058638.1| Drosophila melanogaster LD33732 full length ... 39 2.4
ref|NM_005626.1| Homo sapiens splicing factor, arginine/ser... 39 3.2
ref|XM_068308.1| Homo sapiens similar to nuclear protein (L... 39 3.2
gb|L14076.1|HUMSRP75A Human pre-mRNA splicing factor SRp75 ... 39 3.2
gb|AE003750.1|AE003750 Drosophila melanogaster genomic scaf... 38 4.1
gb|AC005135.1|AC005135 Drosophila melanogaster DNA sequence... 38 4.1
ref|NG_000284.1| Drosophila melanogaster string of pearls (... 38 4.1
gb|M94316.1|RABDNAB Rabbit neurofilament-H mRNA, partial cds 38 4.1
emb|AL163912.1|ATT2I1 Arabidopsis thaliana DNA chromosome 5... 38 4.1
gb|AC007853.4|AC007853 Drosophila melanogaster, chromosome ... 38 4.1
gb|AC008206.10|AC008206 Drosophila melanogaster, chromosome... 38 4.1
gb|AC009744.7| Drosophila melanogaster, chromosome 2L, regi... 38 4.1
dbj|AB021506.1|AB021506 Human herpesvirus 6 DNA, variant B,... 38 5.4
emb|AJ331485.1|HSA331485 Homo sapiens genomic sequence surr... 38 5.4
gb|AE003449.1|AE003449 Drosophila melanogaster genomic scaf... 38 5.4
gb|U92288.1|HHU92288 Human herpesvirus 6 serotype B putativ... 38 5.4
ref|NM_058959.1| Caenorhabditis elegans 38 5.4
gb|AC023732.3| Drosophila melanogaster X BAC RP98-42M11 (Ro... 38 5.4
ref|NM_058843.1| Caenorhabditis elegans 38 5.4
gb|AF230482.1|AF230482 Hydra vulgaris tight junction protei... 38 5.4
gb|AF321299.1|AF321299 Caenorhabditis elegans CENP-C-like p... 38 5.4
gb|AC013453.1|AC013453 Arabidopsis thaliana chromosome I BA... 38 5.4
gb|AC023705.3| Drosophila melanogaster X BAC RP98-7L6 (Rosw... 38 5.4
emb|AL445565.1|MPULM03 Mycoplasma pulmonis (strain UAB CTIP... 38 5.4
gb|AC005617.2|AC005617 Arabidopsis thaliana chromosome II s... 37 7.0
dbj|AP000751.4|AP000751 Homo sapiens genomic DNA, chromosom... 37 7.0
gb|AF397467.1|AF397467 Ictalurus punctatus novel immune-typ... 37 7.0
ref|NM_014715.1| Homo sapiens KIAA0712 gene product (KIAA07... 37 7.0
dbj|AB018255.1|AB018255 Homo sapiens mRNA for KIAA0712 prot... 37 7.0
gb|AC091387.2| Drosophila melanogaster, chromosome 2R, regi... 37 9.2
emb|AJ271723.1|FRU271723 Fugu rubripes Furu-I103, psmb8, ps... 37 9.2
gb|AF157706.1|AF157706 Human herpesvirus 6B strain Z29, com... 37 9.2
gb|AC007329.7|AC007329 Drosophila melanogaster, chromosome ... 37 9.2
emb|AL355931.1|NCB3E4 Neurospora crassa DNA linkage group I... 37 9.2
gb|AE003817.2|AE003817 Drosophila melanogaster genomic scaf... 37 9.2
>ref|NM_007683.1| Mus musculus centromere autoantigen C (Cenpc), mRNA
Length = 3092
Score = 1663 bits (4307), Expect = 0.0
Identities = 839/906 (92%), Positives = 839/906 (92%)
Frame = +2
Query: 1 MAMFHLDHLKNYHRRYCRSSRAPNIHTKKGQNMLEILQDCFEDQSKASFLDDFTESLTSS 60
MAMFHLDHLKNYHRRYCRSSRAPNIHTKKGQNMLEILQDCFEDQSKASFLDDFTESLTSS
Sbjct: 125 MAMFHLDHLKNYHRRYCRSSRAPNIHTKKGQNMLEILQDCFEDQSKASFLDDFTESLTSS 304
Query: 61 TQKKKANYSQSSSKKCPESHSKPVPVSSRTGEASLQXXXXXXXXXXXXVQANEVHHGASD 120
TQKKKANYSQSSSKKCPESHSKPVPVSSRTGEASLQ VQANEVHHGASD
Sbjct: 305 TQKKKANYSQSSSKKCPESHSKPVPVSSRTGEASLQASAEPSEAAGGSVQANEVHHGASD 484
Query: 121 ELDLCVGSPVVLLDANVNTLQKAASPAGQKRVASVSRSPVDRQASNKNISFKTRKRLNFE 180
ELDLCVGSPVVLLDANVNTLQKAASPAGQKRVASVSRSPVDRQASNKNISFKTRKRLNFE
Sbjct: 485 ELDLCVGSPVVLLDANVNTLQKAASPAGQKRVASVSRSPVDRQASNKNISFKTRKRLNFE 664
Query: 181 DKVTSSTAETENSVLQVEDNLSKGQEGTSSEITQKRDDLSSDVQSRSKKNFSELFLETXX 240
DKVTSSTAETENSVLQVEDNLSKGQEGTSSEITQKRDDLSSDVQSRSKKNFSELFLET
Sbjct: 665 DKVTSSTAETENSVLQVEDNLSKGQEGTSSEITQKRDDLSSDVQSRSKKNFSELFLETVK 844
Query: 241 XXXXXXXXXXHTAAVPFSPPPPSDMKLLEDEXXXXXXXXXXXXXLWVMIPSKDRHLSAHK 300
HTAAVPFSPPPPSDMKLLEDE LWVMIPSKDRHLSAHK
Sbjct: 845 RKSKSSSVVRHTAAVPFSPPPPSDMKLLEDEFIIDRSDRSFSSRLWVMIPSKDRHLSAHK 1024
Query: 301 PSPENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELEND 360
PSPENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELEND
Sbjct: 1025 PSPENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELEND 1204
Query: 361 CRSPENKMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQ 420
CRSPENKMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQ
Sbjct: 1205 CRSPENKMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQ 1384
Query: 421 INSKRNMKDCEEVRNEPNPKKQKPALENKRKTNSTQTXXXXXXXXXXXXXXXXXXVPKKV 480
INSKRNMKDCEEVRNEPNPKKQKPALENKRKTNSTQT VPKKV
Sbjct: 1385 INSKRNMKDCEEVRNEPNPKKQKPALENKRKTNSTQTNKEKSGKKFFSGGSKNKFVPKKV 1564
Query: 481 TLTXXXXXXXXXXXXEWWRVKSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKK 540
TLT EWWRVKSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKK
Sbjct: 1565 TLTSRRSRRISQRPSEWWRVKSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKK 1744
Query: 541 PGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPK 600
PGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPK
Sbjct: 1745 PGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPK 1924
Query: 601 RGCKYRNNVMTSPNVHLKSHTEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGS 660
RGCKYRNNVMTSPNVHLKSHTEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGS
Sbjct: 1925 RGCKYRNNVMTSPNVHLKSHTEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGS 2104
Query: 661 SNSEMGDEQDQKSLHFTTRSFNMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRGER 720
SNSEMGDEQDQKSLHFTTRSFNMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRGER
Sbjct: 2105 SNSEMGDEQDQKSLHFTTRSFNMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRGER 2284
Query: 721 VDYQESSSGQLVLEIISPSSVPTKIKAQRNLGKVNKKVTKKPTHLNSHEKAKMELPLDMR 780
VDYQESSSGQLVLEIISPSSVPTKIKAQRNLGKVNKKVTKKPTHLNSHEKAKMELPLDMR
Sbjct: 2285 VDYQESSSGQLVLEIISPSSVPTKIKAQRNLGKVNKKVTKKPTHLNSHEKAKMELPLDMR 2464
Query: 781 LGDPFQATLAKDPETAELVPMDLIRPRDTYRFFVEQHGLKVFKTLDTIYFSTGKLVLGPY 840
LGDPFQATLAKDPETAELVPMDLIRPRDTYRFFVEQHGLKVFKTLDTIYFSTGKLVLGPY
Sbjct: 2465 LGDPFQATLAKDPETAELVPMDLIRPRDTYRFFVEQHGLKVFKTLDTIYFSTGKLVLGPY 2644
Query: 841 EEKGKQHVGQDILVFYVNFGDLLCTLHETPYKLTTGDSFYVPSGNHYNIKNLLNVESSLL 900
EEKGKQHVGQDILVFYVNFGDLLCTLHETPYKLTTGDSFYVPSGNHYNIKNLLNVESSLL
Sbjct: 2645 EEKGKQHVGQDILVFYVNFGDLLCTLHETPYKLTTGDSFYVPSGNHYNIKNLLNVESSLL 2824
Query: 901 FTQIKR 906
FTQIKR
Sbjct: 2825 FTQIKR 2842
>gb|U03113.1|MMCENPC Mus musculus Swiss centromeric protein CENPC (CENP-C) mRNA, complete
cds
Length = 3092
Score = 1663 bits (4307), Expect = 0.0
Identities = 839/906 (92%), Positives = 839/906 (92%)
Frame = +2
Query: 1 MAMFHLDHLKNYHRRYCRSSRAPNIHTKKGQNMLEILQDCFEDQSKASFLDDFTESLTSS 60
MAMFHLDHLKNYHRRYCRSSRAPNIHTKKGQNMLEILQDCFEDQSKASFLDDFTESLTSS
Sbjct: 125 MAMFHLDHLKNYHRRYCRSSRAPNIHTKKGQNMLEILQDCFEDQSKASFLDDFTESLTSS 304
Query: 61 TQKKKANYSQSSSKKCPESHSKPVPVSSRTGEASLQXXXXXXXXXXXXVQANEVHHGASD 120
TQKKKANYSQSSSKKCPESHSKPVPVSSRTGEASLQ VQANEVHHGASD
Sbjct: 305 TQKKKANYSQSSSKKCPESHSKPVPVSSRTGEASLQASAEPSEAAGGSVQANEVHHGASD 484
Query: 121 ELDLCVGSPVVLLDANVNTLQKAASPAGQKRVASVSRSPVDRQASNKNISFKTRKRLNFE 180
ELDLCVGSPVVLLDANVNTLQKAASPAGQKRVASVSRSPVDRQASNKNISFKTRKRLNFE
Sbjct: 485 ELDLCVGSPVVLLDANVNTLQKAASPAGQKRVASVSRSPVDRQASNKNISFKTRKRLNFE 664
Query: 181 DKVTSSTAETENSVLQVEDNLSKGQEGTSSEITQKRDDLSSDVQSRSKKNFSELFLETXX 240
DKVTSSTAETENSVLQVEDNLSKGQEGTSSEITQKRDDLSSDVQSRSKKNFSELFLET
Sbjct: 665 DKVTSSTAETENSVLQVEDNLSKGQEGTSSEITQKRDDLSSDVQSRSKKNFSELFLETVK 844
Query: 241 XXXXXXXXXXHTAAVPFSPPPPSDMKLLEDEXXXXXXXXXXXXXLWVMIPSKDRHLSAHK 300
HTAAVPFSPPPPSDMKLLEDE LWVMIPSKDRHLSAHK
Sbjct: 845 RKSKSSSVVRHTAAVPFSPPPPSDMKLLEDEFIIDRSDRSFSSRLWVMIPSKDRHLSAHK 1024
Query: 301 PSPENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELEND 360
PSPENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELEND
Sbjct: 1025 PSPENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELEND 1204
Query: 361 CRSPENKMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQ 420
CRSPENKMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQ
Sbjct: 1205 CRSPENKMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQ 1384
Query: 421 INSKRNMKDCEEVRNEPNPKKQKPALENKRKTNSTQTXXXXXXXXXXXXXXXXXXVPKKV 480
INSKRNMKDCEEVRNEPNPKKQKPALENKRKTNSTQT VPKKV
Sbjct: 1385 INSKRNMKDCEEVRNEPNPKKQKPALENKRKTNSTQTNKEKSGKKFFSGGSKNKFVPKKV 1564
Query: 481 TLTXXXXXXXXXXXXEWWRVKSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKK 540
TLT EWWRVKSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKK
Sbjct: 1565 TLTSRRSRRISQRPSEWWRVKSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKK 1744
Query: 541 PGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPK 600
PGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPK
Sbjct: 1745 PGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPK 1924
Query: 601 RGCKYRNNVMTSPNVHLKSHTEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGS 660
RGCKYRNNVMTSPNVHLKSHTEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGS
Sbjct: 1925 RGCKYRNNVMTSPNVHLKSHTEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGS 2104
Query: 661 SNSEMGDEQDQKSLHFTTRSFNMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRGER 720
SNSEMGDEQDQKSLHFTTRSFNMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRGER
Sbjct: 2105 SNSEMGDEQDQKSLHFTTRSFNMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRGER 2284
Query: 721 VDYQESSSGQLVLEIISPSSVPTKIKAQRNLGKVNKKVTKKPTHLNSHEKAKMELPLDMR 780
VDYQESSSGQLVLEIISPSSVPTKIKAQRNLGKVNKKVTKKPTHLNSHEKAKMELPLDMR
Sbjct: 2285 VDYQESSSGQLVLEIISPSSVPTKIKAQRNLGKVNKKVTKKPTHLNSHEKAKMELPLDMR 2464
Query: 781 LGDPFQATLAKDPETAELVPMDLIRPRDTYRFFVEQHGLKVFKTLDTIYFSTGKLVLGPY 840
LGDPFQATLAKDPETAELVPMDLIRPRDTYRFFVEQHGLKVFKTLDTIYFSTGKLVLGPY
Sbjct: 2465 LGDPFQATLAKDPETAELVPMDLIRPRDTYRFFVEQHGLKVFKTLDTIYFSTGKLVLGPY 2644
Query: 841 EEKGKQHVGQDILVFYVNFGDLLCTLHETPYKLTTGDSFYVPSGNHYNIKNLLNVESSLL 900
EEKGKQHVGQDILVFYVNFGDLLCTLHETPYKLTTGDSFYVPSGNHYNIKNLLNVESSLL
Sbjct: 2645 EEKGKQHVGQDILVFYVNFGDLLCTLHETPYKLTTGDSFYVPSGNHYNIKNLLNVESSLL 2824
Query: 901 FTQIKR 906
FTQIKR
Sbjct: 2825 FTQIKR 2842
>dbj|AK011004.1|AK011004 Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched
library, clone:2510027E19:centromere autoantigen C, full
insert sequence
Length = 1546
Score = 792 bits (2045), Expect = 0.0
Identities = 403/446 (90%), Positives = 403/446 (90%)
Frame = +1
Query: 1 MAMFHLDHLKNYHRRYCRSSRAPNIHTKKGQNMLEILQDCFEDQSKASFLDDFTESLTSS 60
MA FHLDHLKNYHRRYCRSSRAPNIHTKKGQNMLEILQDCFEDQSKASFLDDFTESLTSS
Sbjct: 208 MASFHLDHLKNYHRRYCRSSRAPNIHTKKGQNMLEILQDCFEDQSKASFLDDFTESLTSS 387
Query: 61 TQKKKANYSQSSSKKCPESHSKPVPVSSRTGEASLQXXXXXXXXXXXXVQANEVHHGASD 120
TQKKKANYSQSSSKKCPESHSKPVPVSSRTGEASLQ VQANEVHHGASD
Sbjct: 388 TQKKKANYSQSSSKKCPESHSKPVPVSSRTGEASLQASAEPSEAAGGSVQANEVHHGASD 567
Query: 121 ELDLCVGSPVVLLDANVNTLQKAASPAGQKRVASVSRSPVDRQASNKNISFKTRKRLNFE 180
ELDLCVGSPVVLLDANVNTLQKAASP GQKRVASVSRSPVDRQASNKNISFKTRKRL FE
Sbjct: 568 ELDLCVGSPVVLLDANVNTLQKAASPGGQKRVASVSRSPVDRQASNKNISFKTRKRLYFE 747
Query: 181 DKVTSSTAETENSVLQVEDNLSKGQEGTSSEITQKRDDLSSDVQSRSKKNFSELFLETXX 240
DKVT STAETENSVLQVEDNLSKGQEGTSSEITQKRDDLSSDVQSRSKKNFSELFLET
Sbjct: 748 DKVTLSTAETENSVLQVEDNLSKGQEGTSSEITQKRDDLSSDVQSRSKKNFSELFLETVK 927
Query: 241 XXXXXXXXXXHTAAVPFSPPPPSDMKLLEDEXXXXXXXXXXXXXLWVMIPSKDRHLSAHK 300
HTAAVPFSPPPPSDMKLLEDE LWVMIPSKDRHLSAHK
Sbjct: 928 RKSKSSSVVRHTAAVPFSPPPPSDMKLLEDEFIIDRSDRSFSSRLWVMIPSKDRHLSAHK 1107
Query: 301 PSPENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELEND 360
PSPENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELEND
Sbjct: 1108PSPENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELEND 1287
Query: 361 CRSPENKMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQ 420
CRSPENKMQSETAKTP AWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQD LQ
Sbjct: 1288CRSPENKMQSETAKTPRAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDKLQ 1467
Query: 421 INSKRNMKDCEEVRNEPNPKKQKPAL 446
INSKRNMKDCEEVRNEPNPKKQKPAL
Sbjct: 1468INSKRNMKDCEEVRNEPNPKKQKPAL 1545
>ref|XM_084163.1| Homo sapiens centromere protein C 1 (CENPC1), mRNA
Length = 3115
Score = 707 bits (1825), Expect = 0.0
Identities = 437/948 (46%), Positives = 558/948 (58%), Gaps = 42/948 (4%)
Frame = +1
Query: 1 MAMFHLDHLKN-YHRRYCRSSRAPNIHTKKGQNMLEILQDCFEDQSKAS-FLDDFTESLT 58
MA LDHLKN Y RR+CR SRA +I+T++GQN+LEILQDCFE++S A+ F + T+S+
Sbjct: 157 MAASGLDHLKNGYRRRFCRPSRARDINTEQGQNVLEILQDCFEEKSLANDFSTNSTKSVP 336
Query: 59 SSTQKKKANYSQSSSKKCPESHSKPVPVSSRTGEASLQXXXXXXXXXXXXVQANEVHHG- 117
+ST+K K QS SK+C +SH K VPVSS+ EASLQ VQA+EVH
Sbjct: 337 NSTRKIKDTCIQSPSKECQKSHPKSVPVSSKKKEASLQFVVEPSEATNRSVQAHEVHQKI 516
Query: 118 ---------------------------ASDELDLCVGSPVVLLDANVNTLQKAASPAGQK 150
A +E L VGSP VLLDA + Q + QK
Sbjct: 517 LATDVSSKNTPDSKKISSRNINDHHSEADEEFYLSVGSPSVLLDAKTSVSQNVIPSSAQK 696
Query: 151 RVASVSRSPVDRQASNKNISFKTRKRLNFEDKVTSSTAETENSVLQVEDNLSKGQEGTSS 210
R + V+ S+ +S KT+KRLNF+DKV E +N V ED S+GQE S
Sbjct: 697 RETYTFENSVNMLPSSTEVSVKTKKRLNFDDKVMLKKIEIDNKVSDEEDKTSEGQERKPS 876
Query: 211 EITQKR-DDLSSDVQSRSKKNFSELFLETXXXXXXXXXXXXHTAAVPFSPPPPSDMKLLE 269
+Q R D ++Q ++KK+FS LFLET H A P PP D KL+E
Sbjct: 877 GSSQNRIRDSEYEIQRQAKKSFSTLFLETVKRKSESSPIVRHAATAPPHSCPPDDTKLIE 1056
Query: 270 DEXXXXXXXXXXXXXLWVMIPSKDRHLSAHKPSP-ENTALLQGKKSREKSHSLSAMTFAR 328
DE W+ IP K L SP E+TALLQG+KSREK H++ T A
Sbjct: 1057 DEFIIDESDQSFASRSWITIPRKAGSLKQRTISPAESTALLQGRKSREKHHNILPKTLAN 1236
Query: 329 NTQSDKAHPIEEAQLSVEE--NPATTCTDELENDCRSPENKMQSETAKTPPAWERTTKQS 386
+ S K HP+E +Q S + + + E N+ RS + +M S+ A+ P +RT KQ
Sbjct: 1237 DKHSHKPHPVETSQPSDKTVLDTSYALIGETVNNYRSTKYEMYSKNAEKPSRSKRTIKQK 1416
Query: 387 QRRVSKPKAAEE-LRKGQSSWENSNVSNTGQDTLQINSKRNMKDCEEVRNEPNPKKQKPA 445
QRR K AEE L GQS EN + S+ QD Q NS RNM++ EE+ N+ KKQ P
Sbjct: 1417 QRRKFMAKPAEEQLDVGQSKDENIHTSHITQDEFQRNSDRNMEEHEEMGNDCVSKKQMPP 1596
Query: 446 LENKRKTNSTQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXXXXXXXXXEWWRVKSDES 505
+ +K+ +ST+ VP++VT T +WW VKS+ES
Sbjct: 1597 VGSKK--SSTRKDKEESKKKRFSSESKNKLVPEEVTSTVTKSRRISRRPSDWWVVKSEES 1770
Query: 506 SVDRNPSKENNSPVVYPNKKKQTKR-NHVSKRAGKKPGSSKRQKTEM--SPRVQKSLNVK 562
V N S N P+ + + +K TK+ N SK KK KRQKT + RVQK LN +
Sbjct: 1771 PVYSNSSVRNELPMHHNSSRKSTKKTNQSSKNIRKKTIPLKRQKTATKGNQRVQKFLNAE 1950
Query: 563 DSGGTVSGHDDTSR-SQRKPLKIIEAD-PTQKSLAISRPKRGCKYRNNVMTSPNVHLKSH 620
SGG V GHD+ SR S +PL+ EAD +K+L SR R K +N+MT+ NV LK
Sbjct: 1951 GSGGIV-GHDEISRCSLSEPLESDEADLAKKKNLDCSRSTRSSKNEDNIMTAQNVPLKPQ 2127
Query: 621 TEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGSSNSEMGDEQDQKSLHFTTRS 680
T YT ES +S K SV EESGPSR N + N ++ DE+ S + +S
Sbjct: 2128 TSGYTCNIPTESNLDSGEHKTSVLEESGPSRLNNNYLMSGKN-DVDDEEVHGSSDDSKQS 2304
Query: 681 FNMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRGERVDYQESSSGQLVLE-IISPS 739
++P ++HHKLVLPSN+PNVRR+ R RLKPLEYWRGER+DYQ SG V+ ++SP
Sbjct: 2305 -KVIPKNRIHHKLVLPSNTPNVRRTKRTRLKPLEYWRGERIDYQGRPSGGFVISGVLSPD 2481
Query: 740 SVPTKIKAQRNLGKVNKKVTKKPTHLNSHE-KAKMELPLDMRLGDPFQATLAKDPETAEL 798
++ +K KA+ N+GKVNKK KK L++ E K + + L + LGDP Q T KDPET E+
Sbjct: 2482 TISSKRKAKENIGKVNKKSNKKRICLDNDERKTNLMVNLGIPLGDPLQPTRVKDPETREI 2661
Query: 799 VPMDLIRPRDTYRFFVEQHGLKVFKTLDTIYFSTGKLVLGPYEEKGKQHVGQDILVFYVN 858
+ MDL+RP+DTY+FFV+ LKV+KTLDT +FSTGKL+LGP EEKGKQHVGQDILVFYVN
Sbjct: 2662 ILMDLVRPQDTYQFFVKHGELKVYKTLDTPFFSTGKLILGPQEEKGKQHVGQDILVFYVN 2841
Query: 859 FGDLLCTLHETPYKLTTGDSFYVPSGNHYNIKNLLNVESSLLFTQIKR 906
FGDLLCTLHETPY L+TGDSFYVPSGN+YNIKNL N ES LLFTQIKR
Sbjct: 2842 FGDLLCTLHETPYILSTGDSFYVPSGNYYNIKNLRNEESVLLFTQIKR 2985
>ref|NM_001812.1| Homo sapiens centromere protein C 1 (CENPC1), mRNA
Length = 3132
Score = 707 bits (1824), Expect = 0.0
Identities = 436/948 (45%), Positives = 558/948 (57%), Gaps = 42/948 (4%)
Frame = +1
Query: 1 MAMFHLDHLKN-YHRRYCRSSRAPNIHTKKGQNMLEILQDCFEDQSKAS-FLDDFTESLT 58
MA LDHLKN Y RR+CR SRA +I+T++GQN+LEILQDCFE++S A+ F + T+S+
Sbjct: 157 MAASGLDHLKNGYRRRFCRPSRARDINTEQGQNVLEILQDCFEEKSLANDFSTNSTKSVP 336
Query: 59 SSTQKKKANYSQSSSKKCPESHSKPVPVSSRTGEASLQXXXXXXXXXXXXVQANEVHHG- 117
+ST+K K QS SK+C +SH K VPVSS+ EASLQ VQA+EVH
Sbjct: 337 NSTRKIKDTCIQSPSKECQKSHPKSVPVSSKKKEASLQFVVEPSEATNRSVQAHEVHQKI 516
Query: 118 ---------------------------ASDELDLCVGSPVVLLDANVNTLQKAASPAGQK 150
A +E L VGSP VLLDA + Q + +K
Sbjct: 517 LATDVSSKNTPDSKKISSRNINDHHSEADEEFYLSVGSPSVLLDAKTSVSQNVIPSSAKK 696
Query: 151 RVASVSRSPVDRQASNKNISFKTRKRLNFEDKVTSSTAETENSVLQVEDNLSKGQEGTSS 210
R + V+ S+ +S KT+KRLNF+DKV E +N V ED S+GQE S
Sbjct: 697 RETYTFENSVNMLPSSTEVSVKTKKRLNFDDKVMLKKIEIDNKVSDEEDKTSEGQERKPS 876
Query: 211 EITQKR-DDLSSDVQSRSKKNFSELFLETXXXXXXXXXXXXHTAAVPFSPPPPSDMKLLE 269
+Q R D ++Q ++KK+FS LFLET H A P PP D KL+E
Sbjct: 877 GSSQNRIRDSEYEIQRQAKKSFSTLFLETVKRKSESSPIVRHAATAPPHSCPPDDTKLIE 1056
Query: 270 DEXXXXXXXXXXXXXLWVMIPSKDRHLSAHKPSP-ENTALLQGKKSREKSHSLSAMTFAR 328
DE W+ IP K L SP E+TAL QG+KSREK H++ T A
Sbjct: 1057 DEFIIDESDQSFASRSWITIPRKAGSLKQRTISPAESTALFQGRKSREKHHNILPKTLAN 1236
Query: 329 NTQSDKAHPIEEAQLSVEE--NPATTCTDELENDCRSPENKMQSETAKTPPAWERTTKQS 386
+ S K HP+E +Q S + + + DE N+ RS + +M S+ A+ P +RT KQ
Sbjct: 1237 DKHSHKPHPVETSQPSDKTVLDTSYALIDETVNNYRSTKYEMYSKNAEKPSRSKRTIKQK 1416
Query: 387 QRRVSKPKAAEE-LRKGQSSWENSNVSNTGQDTLQINSKRNMKDCEEVRNEPNPKKQKPA 445
QRR K AEE L GQS EN + S+ QD Q NS RNM++ EE+ N+ KKQ P
Sbjct: 1417 QRRKFMAKPAEEQLDVGQSKDENIHTSHITQDEFQRNSDRNMEEHEEMGNDCVSKKQMPP 1596
Query: 446 LENKRKTNSTQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXXXXXXXXXEWWRVKSDES 505
+ +K+ +ST+ VP++VT T +WW VKS+ES
Sbjct: 1597 VGSKK--SSTRKDKEESKKKRFSSESKNKLVPEEVTSTVTKSRRISRRPSDWWVVKSEES 1770
Query: 506 SVDRNPSKENNSPVVYPNKKKQTKR-NHVSKRAGKKPGSSKRQKTEM--SPRVQKSLNVK 562
V N S N P+ + + +K TK+ N SK KK KRQKT + RVQK LN +
Sbjct: 1771 PVYSNSSVRNELPMHHNSSRKSTKKTNQSSKNIRKKTIPLKRQKTATKGNQRVQKFLNAE 1950
Query: 563 DSGGTVSGHDDTSR-SQRKPLKIIEAD-PTQKSLAISRPKRGCKYRNNVMTSPNVHLKSH 620
SGG V GHD+ SR S +PL+ EAD +K+L SR R K +N+MT+ NV LK
Sbjct: 1951 GSGGIV-GHDEISRCSLSEPLESDEADLAKKKNLDCSRSTRSSKNEDNIMTAQNVPLKPQ 2127
Query: 621 TEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGSSNSEMGDEQDQKSLHFTTRS 680
T YT ES +S K SV EESGPSR N + N ++ DE+ S + +S
Sbjct: 2128 TSGYTCNIPTESNLDSGEHKTSVLEESGPSRLNNNYLMSGKN-DVDDEEVHGSSDDSKQS 2304
Query: 681 FNMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRGERVDYQESSSGQLVLE-IISPS 739
++P ++HHKLVLPSN+PNVRR+ R RLKPLEYWRGER+DYQ SG V+ ++SP
Sbjct: 2305 -KVIPKNRIHHKLVLPSNTPNVRRTKRTRLKPLEYWRGERIDYQGRPSGGFVISGVLSPD 2481
Query: 740 SVPTKIKAQRNLGKVNKKVTKKPTHLNSHE-KAKMELPLDMRLGDPFQATLAKDPETAEL 798
++ +K KA+ N+GKVNKK KK L++ E K + + L + LGDP Q T KDPET E+
Sbjct: 2482 TISSKRKAKENIGKVNKKSNKKRICLDNDERKTNLMVNLGIPLGDPLQPTRVKDPETREI 2661
Query: 799 VPMDLIRPRDTYRFFVEQHGLKVFKTLDTIYFSTGKLVLGPYEEKGKQHVGQDILVFYVN 858
+ MDL+RP+DTY+FFV+ LKV+KTLDT +FSTGKL+LGP EEKGKQHVGQDILVFYVN
Sbjct: 2662 ILMDLVRPQDTYQFFVKHGELKVYKTLDTPFFSTGKLILGPQEEKGKQHVGQDILVFYVN 2841
Query: 859 FGDLLCTLHETPYKLTTGDSFYVPSGNHYNIKNLLNVESSLLFTQIKR 906
FGDLLCTLHETPY L+TGDSFYVPSGN+YNIKNL N ES LLFTQIKR
Sbjct: 2842 FGDLLCTLHETPYILSTGDSFYVPSGNYYNIKNLRNEESVLLFTQIKR 2985
>gb|M95724.1|HUMCENPRO H.sapiens centromere autoantigen C (CENPC) mRNA, complete cds
Length = 3132
Score = 707 bits (1824), Expect = 0.0
Identities = 436/948 (45%), Positives = 558/948 (57%), Gaps = 42/948 (4%)
Frame = +1
Query: 1 MAMFHLDHLKN-YHRRYCRSSRAPNIHTKKGQNMLEILQDCFEDQSKAS-FLDDFTESLT 58
MA LDHLKN Y RR+CR SRA +I+T++GQN+LEILQDCFE++S A+ F + T+S+
Sbjct: 157 MAASGLDHLKNGYRRRFCRPSRARDINTEQGQNVLEILQDCFEEKSLANDFSTNSTKSVP 336
Query: 59 SSTQKKKANYSQSSSKKCPESHSKPVPVSSRTGEASLQXXXXXXXXXXXXVQANEVHHG- 117
+ST+K K QS SK+C +SH K VPVSS+ EASLQ VQA+EVH
Sbjct: 337 NSTRKIKDTCIQSPSKECQKSHPKSVPVSSKKKEASLQFVVEPSEATNRSVQAHEVHQKI 516
Query: 118 ---------------------------ASDELDLCVGSPVVLLDANVNTLQKAASPAGQK 150
A +E L VGSP VLLDA + Q + +K
Sbjct: 517 LATDVSSKNTPDSKKISSRNINDHHSEADEEFYLSVGSPSVLLDAKTSVSQNVIPSSAKK 696
Query: 151 RVASVSRSPVDRQASNKNISFKTRKRLNFEDKVTSSTAETENSVLQVEDNLSKGQEGTSS 210
R + V+ S+ +S KT+KRLNF+DKV E +N V ED S+GQE S
Sbjct: 697 RETYTFENSVNMLPSSTEVSVKTKKRLNFDDKVMLKKIEIDNKVSDEEDKTSEGQERKPS 876
Query: 211 EITQKR-DDLSSDVQSRSKKNFSELFLETXXXXXXXXXXXXHTAAVPFSPPPPSDMKLLE 269
+Q R D ++Q ++KK+FS LFLET H A P PP D KL+E
Sbjct: 877 GSSQNRIRDSEYEIQRQAKKSFSTLFLETVKRKSESSPIVRHAATAPPHSCPPDDTKLIE 1056
Query: 270 DEXXXXXXXXXXXXXLWVMIPSKDRHLSAHKPSP-ENTALLQGKKSREKSHSLSAMTFAR 328
DE W+ IP K L SP E+TAL QG+KSREK H++ T A
Sbjct: 1057 DEFIIDESDQSFASRSWITIPRKAGSLKQRTISPAESTALFQGRKSREKHHNILPKTLAN 1236
Query: 329 NTQSDKAHPIEEAQLSVEE--NPATTCTDELENDCRSPENKMQSETAKTPPAWERTTKQS 386
+ S K HP+E +Q S + + + DE N+ RS + +M S+ A+ P +RT KQ
Sbjct: 1237 DKHSHKPHPVETSQPSDKTVLDTSYALIDETVNNYRSTKYEMYSKNAEKPSRSKRTIKQK 1416
Query: 387 QRRVSKPKAAEE-LRKGQSSWENSNVSNTGQDTLQINSKRNMKDCEEVRNEPNPKKQKPA 445
QRR K AEE L GQS EN + S+ QD Q NS RNM++ EE+ N+ KKQ P
Sbjct: 1417 QRRKFMAKPAEEQLDVGQSKDENIHTSHITQDEFQRNSDRNMEEHEEMGNDCVSKKQMPP 1596
Query: 446 LENKRKTNSTQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXXXXXXXXXEWWRVKSDES 505
+ +K+ +ST+ VP++VT T +WW VKS+ES
Sbjct: 1597 VGSKK--SSTRKDKEESKKKRFSSESKNKLVPEEVTSTVTKSRRISRRPSDWWVVKSEES 1770
Query: 506 SVDRNPSKENNSPVVYPNKKKQTKR-NHVSKRAGKKPGSSKRQKTEM--SPRVQKSLNVK 562
V N S N P+ + + +K TK+ N SK KK KRQKT + RVQK LN +
Sbjct: 1771 PVYSNSSVRNELPMHHNSSRKSTKKTNQSSKNIRKKTIPLKRQKTATKGNQRVQKFLNAE 1950
Query: 563 DSGGTVSGHDDTSR-SQRKPLKIIEAD-PTQKSLAISRPKRGCKYRNNVMTSPNVHLKSH 620
SGG V GHD+ SR S +PL+ EAD +K+L SR R K +N+MT+ NV LK
Sbjct: 1951 GSGGIV-GHDEISRCSLSEPLESDEADLAKKKNLDCSRSTRSSKNEDNIMTAQNVPLKPQ 2127
Query: 621 TEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGSSNSEMGDEQDQKSLHFTTRS 680
T YT ES +S K SV EESGPSR N + N ++ DE+ S + +S
Sbjct: 2128 TSGYTCNIPTESNLDSGEHKTSVLEESGPSRLNNNYLMSGKN-DVDDEEVHGSSDDSKQS 2304
Query: 681 FNMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRGERVDYQESSSGQLVLE-IISPS 739
++P ++HHKLVLPSN+PNVRR+ R RLKPLEYWRGER+DYQ SG V+ ++SP
Sbjct: 2305 -KVIPKNRIHHKLVLPSNTPNVRRTKRTRLKPLEYWRGERIDYQGRPSGGFVISGVLSPD 2481
Query: 740 SVPTKIKAQRNLGKVNKKVTKKPTHLNSHE-KAKMELPLDMRLGDPFQATLAKDPETAEL 798
++ +K KA+ N+GKVNKK KK L++ E K + + L + LGDP Q T KDPET E+
Sbjct: 2482 TISSKRKAKENIGKVNKKSNKKRICLDNDERKTNLMVNLGIPLGDPLQPTRVKDPETREI 2661
Query: 799 VPMDLIRPRDTYRFFVEQHGLKVFKTLDTIYFSTGKLVLGPYEEKGKQHVGQDILVFYVN 858
+ MDL+RP+DTY+FFV+ LKV+KTLDT +FSTGKL+LGP EEKGKQHVGQDILVFYVN
Sbjct: 2662 ILMDLVRPQDTYQFFVKHGELKVYKTLDTPFFSTGKLILGPQEEKGKQHVGQDILVFYVN 2841
Query: 859 FGDLLCTLHETPYKLTTGDSFYVPSGNHYNIKNLLNVESSLLFTQIKR 906
FGDLLCTLHETPY L+TGDSFYVPSGN+YNIKNL N ES LLFTQIKR
Sbjct: 2842 FGDLLCTLHETPYILSTGDSFYVPSGNYYNIKNLRNEESVLLFTQIKR 2985
>gb|AC010201.18| Homo sapiens 12 BAC RP11-1109F11 (Roswell Park Cancer Institute Human
BAC Library) complete sequence
Length = 168851
Score = 307 bits (787), Expect(3) = e-129
Identities = 204/485 (42%), Positives = 276/485 (56%), Gaps = 11/485 (2%)
Frame = -1
Query: 285 LWVMIPSKDRHLSAHKPSP-ENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQL 343
L + IP K L SP E+TALLQ +KSREK H++ A T A + S K H +E +Q
Sbjct: 18536 LGITIPRKAGPLKQRTISPAESTALLQDRKSREKHHNILAKTLANDKHSHKPHLVETSQP 18357
Query: 344 SVEE--NPATTCTDELENDCRSPENKMQSETAKTPPAWERTTKQSQRRVSKPKAAEE-LR 400
S + + + T E ENDCRS + +M S+ A+ +RT KQ QRR K AEE L
Sbjct: 18356 SDKTVLDTSYALTGETENDCRSTKYEMYSKNAEKSSGSKRTIKQKQRRKFMAKPAEEQLD 18177
Query: 401 KGQSSWENSNVSNTGQDTLQINSKRNMKDCEEVRNEPNPKKQKPALENKRKTNSTQTXXX 460
GQ+ EN ++S+ QD Q NS RNM++ EE+ N+ K Q P + +K+ +ST+
Sbjct: 18176 VGQTKDENIHMSHITQDKFQRNSDRNMEEREEMGNDCASKIQMPPVGSKK--SSTRKDKE 18003
Query: 461 XXXXXXXXXXXXXXXVPKKVTLTXXXXXXXXXXXXEWWRVKSDESSVDRNPSKENNSPVV 520
V ++VT T WW VKS+ES V N S N P+
Sbjct: 18002 ESKKKRFSSESKNKLVSEEVTSTVTRSRRISRHPSNWWVVKSEESPVYSNSSIRNELPLH 17823
Query: 521 YPNKKKQTKR-NHVSKRAGKKPGSSKRQKTEM--SPRVQKSLNVKDSGGTVSGHDDTSRS 577
+ +++K K+ N SK GKK KRQKT S RVQK LN K SGG + GHD+ S
Sbjct: 17822 HNSRQKSAKKTNQSSKNIGKKTIPLKRQKTATKDSQRVQKFLNAKGSGGII-GHDEISSC 17646
Query: 578 -QRKPLKIIEAD-PTQKSLAISRPKRGCKYRNNVMTSPNVHLKSHTEEYTSKTQMESASN 635
+PL+ EAD +K+L SR K +N+MT+ NV LK T YT T ES +
Sbjct: 17645 FLSEPLESDEADLAKRKNLDCSRSTGSSKNEDNIMTAQNVPLKPQTSGYTCNTPTESNLD 17466
Query: 636 SEMSKRSVWEESGPSRFKN-YEMPGSSNSEMGDEQDQKSLHFTTRSFNMVPDKKLHHKLV 694
S K SV EESGPSR N Y M G +N+++ DE+ S + R+ ++P ++HHKLV
Sbjct: 17465 SGEHKTSVLEESGPSRLNNNYLMSGKNNNDVDDEEVPGSSDDSKRT-KVIPKNRIHHKLV 17289
Query: 695 LPSNSPNVRRSNRIRLKPLEYWRGERVDYQESSSGQLVLE-IISPSSVPTKIKAQRNLGK 753
LPSN+PNVRR+ R RLKPLEYWRG+++DYQ SG V+ I+SP + +K KA+ N+GK
Sbjct: 17288 LPSNTPNVRRTKRTRLKPLEYWRGQQIDYQGRPSGGFVISGILSPGKISSKRKARENIGK 17109
Query: 754 VNKKV 758
V+KK+
Sbjct: 17108 VDKKI 17094
Score = 209 bits (532), Expect = 1e-51
Identities = 105/164 (64%), Positives = 127/164 (77%), Gaps = 1/164 (0%)
Frame = -2
Query: 744 KIKAQRNLGKVNKKVTKKPTHLNSHE-KAKMELPLDMRLGDPFQATLAKDPETAELVPMD 802
K + ++ L K+ KK KK L++ E K + + L + LGDP Q + KDPET E++ MD
Sbjct: 17137 KGRQEKILEKLTKKSNKKRICLDNDERKTSLMVNLGIPLGDPLQPAMVKDPETREIILMD 16958
Query: 803 LIRPRDTYRFFVEQHGLKVFKTLDTIYFSTGKLVLGPYEEKGKQHVGQDILVFYVNFGDL 862
L+RP+DTY+FFV+ LKV+ TLDT +FSTGKL+L P EEKGKQHVGQDIL FYVNFGDL
Sbjct: 16957 LVRPQDTYQFFVKHGELKVYNTLDTPFFSTGKLILRPQEEKGKQHVGQDILFFYVNFGDL 16778
Query: 863 LCTLHETPYKLTTGDSFYVPSGNHYNIKNLLNVESSLLFTQIKR 906
CTLHE PY ++TGDSFYVPSGN+YNIKNLLN ES LLFTQIKR
Sbjct: 16777 SCTLHEIPYIISTGDSFYVPSGNYYNIKNLLNEESVLLFTQIKR 16646
Score = 146 bits (369), Expect(3) = e-129
Identities = 93/223 (41%), Positives = 123/223 (54%), Gaps = 30/223 (13%)
Frame = -2
Query: 1 MAMFHLDHLKN-YHRRYCRSSRAPNIHTKKGQNMLEILQDCFEDQSKAS-FLDDFTESLT 58
MA+ LDHLKN Y RR+C+ SRA +I+T++GQN+LEILQDCFE++S A+ F + T+S+
Sbjct: 19492 MAVSGLDHLKNGYRRRFCQPSRARDINTEQGQNVLEILQDCFEEKSLANDFSTNSTKSVL 19313
Query: 59 SSTQKKKANYSQSSSKKCPESHSKPVPVSSRTGEASLQXXXXXXXXXXXXVQANEV---- 114
+ST+K K QS SK+C +SH K VP+SSR EASLQ VQA+EV
Sbjct: 19312 NSTRKIKDTCIQSPSKECQKSHPKSVPLSSRKKEASLQFVVEPSEATNRSVQAHEVRQKI 19133
Query: 115 ------------------------HHGASDELDLCVGSPVVLLDANVNTLQKAASPAGQK 150
H A +E L VGSP VLLDA + Q + QK
Sbjct: 19132 LATDVSSKNTPDLKKM*SRNINDHHSEADEEFYLSVGSPSVLLDAKTSVSQNVIPSSAQK 18953
Query: 151 RVASVSRSPVDRQASNKNISFKTRKRLNFEDKVTSSTAETENS 193
R + V+ S+ +S KT+KRLNFEDKV E + +
Sbjct: 18952 RETYTFENSVNMLPSSTEVSLKTKKRLNFEDKVILKKIEIDRN 18824
Score = 56.6 bits (135), Expect(3) = e-129
Identities = 35/84 (41%), Positives = 44/84 (51%), Gaps = 1/84 (1%)
Frame = -3
Query: 189 ETENSVLQVEDNLSKGQEGTSSEITQKRDDLSS-DVQSRSKKNFSELFLETXXXXXXXXX 247
E +N V ED S+GQE S +Q R S ++Q ++KK+FS LFLET
Sbjct: 18828 EIDNKVSDKEDKTSEGQERKPSGSSQNRIRHSEYEIQ*QAKKSFSTLFLETVKRKSESSP 18649
Query: 248 XXXHTAAVPFSPPPPSDMKLLEDE 271
H VP PP DMKL+EDE
Sbjct: 18648 IVRHGGIVPPHSCPPDDMKLIEDE 18577
>ref|XM_017019.2| Homo sapiens similar to centromere protein C 1 (H. sapiens)
(LOC144645), mRNA
Length = 3131
Score = 307 bits (787), Expect(3) = e-129
Identities = 204/485 (42%), Positives = 276/485 (56%), Gaps = 11/485 (2%)
Frame = +1
Query: 285 LWVMIPSKDRHLSAHKPSP-ENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQL 343
L + IP K L SP E+TALLQ +KSREK H++ A T A + S K H +E +Q
Sbjct: 1114 LGITIPRKAGPLKQRTISPAESTALLQDRKSREKHHNILAKTLANDKHSHKPHLVETSQP 1293
Query: 344 SVEE--NPATTCTDELENDCRSPENKMQSETAKTPPAWERTTKQSQRRVSKPKAAEE-LR 400
S + + + T E ENDCRS + +M S+ A+ +RT KQ QRR K AEE L
Sbjct: 1294 SDKTVLDTSYALTGETENDCRSTKYEMYSKNAEKSSGSKRTIKQKQRRKFMAKPAEEQLD 1473
Query: 401 KGQSSWENSNVSNTGQDTLQINSKRNMKDCEEVRNEPNPKKQKPALENKRKTNSTQTXXX 460
GQ+ EN ++S+ QD Q NS RNM++ EE+ N+ K Q P + +K+ +ST+
Sbjct: 1474 VGQTKDENIHMSHITQDKFQRNSDRNMEEREEMGNDCASKIQMPPVGSKK--SSTRKDKE 1647
Query: 461 XXXXXXXXXXXXXXXVPKKVTLTXXXXXXXXXXXXEWWRVKSDESSVDRNPSKENNSPVV 520
V ++VT T WW VKS+ES V N S N P+
Sbjct: 1648 ESKKKRFSSESKNKLVSEEVTSTVTRSRRISRHPSNWWVVKSEESPVYSNSSIRNELPLH 1827
Query: 521 YPNKKKQTKR-NHVSKRAGKKPGSSKRQKTEM--SPRVQKSLNVKDSGGTVSGHDDTSRS 577
+ +++K K+ N SK GKK KRQKT S RVQK LN K SGG + GHD+ S
Sbjct: 1828 HNSRQKSAKKTNQSSKNIGKKTIPLKRQKTATKDSQRVQKFLNAKGSGGII-GHDEISSC 2004
Query: 578 -QRKPLKIIEAD-PTQKSLAISRPKRGCKYRNNVMTSPNVHLKSHTEEYTSKTQMESASN 635
+PL+ EAD +K+L SR K +N+MT+ NV LK T YT T ES +
Sbjct: 2005 FLSEPLESDEADLAKRKNLDCSRSTGSSKNEDNIMTAQNVPLKPQTSGYTCNTPTESNLD 2184
Query: 636 SEMSKRSVWEESGPSRFKN-YEMPGSSNSEMGDEQDQKSLHFTTRSFNMVPDKKLHHKLV 694
S K SV EESGPSR N Y M G +N+++ DE+ S + R+ ++P ++HHKLV
Sbjct: 2185 SGEHKTSVLEESGPSRLNNNYLMSGKNNNDVDDEEVPGSSDDSKRT-KVIPKNRIHHKLV 2361
Query: 695 LPSNSPNVRRSNRIRLKPLEYWRGERVDYQESSSGQLVLE-IISPSSVPTKIKAQRNLGK 753
LPSN+PNVRR+ R RLKPLEYWRG+++DYQ SG V+ I+SP + +K KA+ N+GK
Sbjct: 2362 LPSNTPNVRRTKRTRLKPLEYWRGQQIDYQGRPSGGFVISGILSPGKISSKRKARENIGK 2541
Query: 754 VNKKV 758
V+KK+
Sbjct: 2542 VDKKI 2556
Score = 209 bits (532), Expect = 1e-51
Identities = 105/164 (64%), Positives = 127/164 (77%), Gaps = 1/164 (0%)
Frame = +2
Query: 744 KIKAQRNLGKVNKKVTKKPTHLNSHE-KAKMELPLDMRLGDPFQATLAKDPETAELVPMD 802
K + ++ L K+ KK KK L++ E K + + L + LGDP Q + KDPET E++ MD
Sbjct: 2513 KGRQEKILEKLTKKSNKKRICLDNDERKTSLMVNLGIPLGDPLQPAMVKDPETREIILMD 2692
Query: 803 LIRPRDTYRFFVEQHGLKVFKTLDTIYFSTGKLVLGPYEEKGKQHVGQDILVFYVNFGDL 862
L+RP+DTY+FFV+ LKV+ TLDT +FSTGKL+L P EEKGKQHVGQDIL FYVNFGDL
Sbjct: 2693 LVRPQDTYQFFVKHGELKVYNTLDTPFFSTGKLILRPQEEKGKQHVGQDILFFYVNFGDL 2872
Query: 863 LCTLHETPYKLTTGDSFYVPSGNHYNIKNLLNVESSLLFTQIKR 906
CTLHE PY ++TGDSFYVPSGN+YNIKNLLN ES LLFTQIKR
Sbjct: 2873 SCTLHEIPYIISTGDSFYVPSGNYYNIKNLLNEESVLLFTQIKR 3004
Score = 146 bits (369), Expect(3) = e-129
Identities = 93/223 (41%), Positives = 123/223 (54%), Gaps = 30/223 (13%)
Frame = +2
Query: 1 MAMFHLDHLKN-YHRRYCRSSRAPNIHTKKGQNMLEILQDCFEDQSKAS-FLDDFTESLT 58
MA+ LDHLKN Y RR+C+ SRA +I+T++GQN+LEILQDCFE++S A+ F + T+S+
Sbjct: 158 MAVSGLDHLKNGYRRRFCQPSRARDINTEQGQNVLEILQDCFEEKSLANDFSTNSTKSVL 337
Query: 59 SSTQKKKANYSQSSSKKCPESHSKPVPVSSRTGEASLQXXXXXXXXXXXXVQANEV---- 114
+ST+K K QS SK+C +SH K VP+SSR EASLQ VQA+EV
Sbjct: 338 NSTRKIKDTCIQSPSKECQKSHPKSVPLSSRKKEASLQFVVEPSEATNRSVQAHEVRQKI 517
Query: 115 ------------------------HHGASDELDLCVGSPVVLLDANVNTLQKAASPAGQK 150
H A +E L VGSP VLLDA + Q + QK
Sbjct: 518 LATDVSSKNTPDLKKM*SRNINDHHSEADEEFYLSVGSPSVLLDAKTSVSQNVIPSSAQK 697
Query: 151 RVASVSRSPVDRQASNKNISFKTRKRLNFEDKVTSSTAETENS 193
R + V+ S+ +S KT+KRLNFEDKV E + +
Sbjct: 698 RETYTFENSVNMLPSSTEVSLKTKKRLNFEDKVILKKIEIDRN 826
Score = 56.6 bits (135), Expect(3) = e-129
Identities = 35/84 (41%), Positives = 44/84 (51%), Gaps = 1/84 (1%)
Frame = +3
Query: 189 ETENSVLQVEDNLSKGQEGTSSEITQKRDDLSS-DVQSRSKKNFSELFLETXXXXXXXXX 247
E +N V ED S+GQE S +Q R S ++Q ++KK+FS LFLET
Sbjct: 822 EIDNKVSDKEDKTSEGQERKPSGSSQNRIRHSEYEIQ*QAKKSFSTLFLETVKRKSESSP 1001
Query: 248 XXXHTAAVPFSPPPPSDMKLLEDE 271
H VP PP DMKL+EDE
Sbjct: 1002IVRHGGIVPPHSCPPDDMKLIEDE 1073
>gb|U35657.1|OAU35657 Ovis aries centromere protein C (CENP-C) mRNA, partial cds
Length = 1376
Score = 317 bits (811), Expect = 5e-84
Identities = 193/411 (46%), Positives = 246/411 (58%), Gaps = 6/411 (1%)
Frame = +1
Query: 501 KSDESSVDRNPSKENNSPVVYPNKKKQT--KRNHVSKRAGKKPGSSKRQKTEMSPRVQKS 558
KS++SS + S N V + +++K K N SK GKK K+QK
Sbjct: 1 KSEQSSFSSSSSVRNELSVYHNSRQKPPAEKTNQSSKNIGKKAAPFKKQKRA-------- 156
Query: 559 LNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLK 618
N SG V D+ +Q + L+ EAD +K G + M + NVH K
Sbjct: 157 -NKGSSGAQVLYAKDSGGAQNESLRSNEADLAKKKNPNPSGDTGSSKNQDSMAAQNVHQK 333
Query: 619 SHTEEYTSKTQMESASNSE-MSKRSVWEESGPSRFKNYEMPGSSNSEMGDEQDQKSLHFT 677
S T T +S E + + E R KNY + +S++ D Q++L+ +
Sbjct: 334 SQMSVETCTTPSKSNLILESLGLQFFGREVTLFRLKNY-LTSERHSDVDDNVVQENLNDS 510
Query: 678 TRSF-NMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRGERVDYQESSSGQLVLE-I 735
+ P+ K+HHKLVLPS +PNVRR+ R R KPLEYWRGER+DYQ SG V+ I
Sbjct: 511 RGEIPDSTPESKMHHKLVLPSYTPNVRRTMRTRSKPLEYWRGERIDYQARPSGGFVIGGI 690
Query: 736 ISPSSVPTKIKAQRNLGKVNKKVTKKPTHL-NSHEKAKMELPLDMRLGDPFQATLAKDPE 794
+SP +V +K KA+ NLG++ +K L N+ K K + L++ LGDP Q T KDPE
Sbjct: 691 LSPDTVSSKRKAKGNLGRIITTANRKRICLENAPIKNKFMVNLNIPLGDPLQPTRVKDPE 870
Query: 795 TAELVPMDLIRPRDTYRFFVEQHGLKVFKTLDTIYFSTGKLVLGPYEEKGKQHVGQDILV 854
T E V MDLIRPRDTY+F VE LKV+KTLDT +FS+GKL++GP +EKGKQHVG D LV
Sbjct: 871 TQETVLMDLIRPRDTYQFCVEHDELKVYKTLDTPFFSSGKLIIGPLQEKGKQHVGLDTLV 1050
Query: 855 FYVNFGDLLCTLHETPYKLTTGDSFYVPSGNHYNIKNLLNVESSLLFTQIK 905
FYVN G LLCTLHETPY +TTGDSFYVPSGN+YNIKNLLN E LLFTQIK
Sbjct: 1051FYVNLGYLLCTLHETPYIVTTGDSFYVPSGNYYNIKNLLNEERVLLFTQIK 1203
>dbj|AB004650.1|AB004650 Chicken mRNA for CENP-C, clone CENP-C_1_2, complete cds
Length = 2760
Score = 191 bits (486), Expect = 2e-46
Identities = 181/698 (25%), Positives = 303/698 (42%), Gaps = 48/698 (6%)
Frame = +1
Query: 256 PFSPPPPSD--MKLLEDEXXXXXXXXXXXXXLWVMIPSKDRHLS---AHKPSPENTALLQ 310
P SP P D +++ D W IP K+R + P ++ + +
Sbjct: 559 PSSPSPVKDHNVEIESDCEFLIDESGCLSFKSWFSIPRKNRKSQKDGSAAPVLKSQSSDK 738
Query: 311 GKKSREKSHSLSAMTFARNTQSDKAHPIE-EAQLSVEENPATTCTDELENDCRSPENKMQ 369
K + +K +++ + Q K ++ + + + E +P ++ +++ + ++KMQ
Sbjct: 739 EKTADKKGKNMNVQAEVHSEQKTKNVRVQRDLKRTSESHPVSS-----DSEGKVLKSKMQ 903
Query: 370 SET--AKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSN----------------V 411
S T K+ + + + ++++S AE+L E S+
Sbjct: 904 SSTHAGKSKKDALKGSSKHRKKMSYESEAEQLMLSGLDSETSDGEQKIRRVMPREDLAVP 1083
Query: 412 SNTGQDTLQINSKRNMKDCEEVRNEPNPKKQKPALENKRKTNSTQTXXXXXXXXXXXXXX 471
S Q ++SK+N+ C+ ++ ++ + ++T + T
Sbjct: 1084 SAEHQQEQMLSSKKNLTPCKYQQSASKAYQRSVHKKQTKQTLANDTVLKSQR-------- 1239
Query: 472 XXXXVPKKVTLTXXXXXXXXXXXXEWWRVKSD--ESSVDRNPSKENNSPVVYPNKKKQTK 529
KK+ + W S+ E ++R P + N P+++ QT
Sbjct: 1240 ------KKLKKSGKRNGNKNPEPRRWKSSDSEPGEEGLEREPLESNEMFTSPPHQELQT- 1398
Query: 530 RNHVSKRAGKKPGSSKRQKTEMSPRVQKSLNVKDSGGTVSGH-------------DDTSR 576
S QK S + +K L+ +S V+ D
Sbjct: 1399 --------------SVLQKLAKSEKAEKVLHALESVTDVNNKTPLKAVELLQHLVDSMKN 1536
Query: 577 SQRKPLKIIEADPTQKSLAISRPKRGCKY-RNNVMTSPNVHLKSHTEEYTSK----TQME 631
S++K + + K + KR C R++ + S E SK + +
Sbjct: 1537 SEKKRSSVTSSGKMLKKVHHRAHKRACSITRDSEPQNTTDSDSSSAPEVASKKPKSNRHQ 1716
Query: 632 SASNSEMSKRSVWEESGP--SRFKNYEMPGSSNSEMGDEQDQKSLHFTTRSFNMVPDKKL 689
+S +++++ ESG + Y P S + E +E S + N++ D+
Sbjct: 1717 RLQHSPAAEKAMGPESGLVLEHSEKYTSP-SKHCEENNESSDNSEDLHCQIKNLLSDEIG 1893
Query: 690 HHKLVLPSNSPNVRRSNRIRLKPLEYWRGERVDYQESSSGQLVLEIISPSSVPTKIKAQR 749
K+VLPSN+PNVRR+ RIRLKPLEYWRGERV Y SG+L++ I+ + +K
Sbjct: 1894 RQKIVLPSNTPNVRRTKRIRLKPLEYWRGERVTYTLKPSGRLLISGIAGAEAEPHMK--- 2064
Query: 750 NLGKVNKKVTKKPTHLNSHEKAKMELP--LDMRLGDPFQATLAKDPETAELVPMDLIRPR 807
NK K H K + E+ LD+ L D + T DP T + V ++ I
Sbjct: 2065 -----NKL---KSRHKKKRAKTRSEVVKCLDIPLADASKPTSIVDPVTNQEVLLECINSG 2220
Query: 808 DTYRFFVEQHGLKVFKTLDTIYFSTGKLVLGPYEEKGKQHVGQDILVFYVNFGDLLCTLH 867
++ F E +KV+K+L+T F+ GKL+L P +EKG Q V D + FYV G ++ TLH
Sbjct: 2221 SSHSCFFEDESIKVYKSLNTSDFAAGKLILKPLKEKGHQFVHMDTIAFYVIRGQIITTLH 2400
Query: 868 ETPYKLTTGDSFYVPSGNHYNIKNLLNVESSLLFTQIK 905
+T Y LT+GD FYVP+GN YNI+NLLN ES L FTQ+K
Sbjct: 2401 KTSYYLTSGDYFYVPAGNGYNIRNLLNEESVLHFTQLK 2514
Score = 41.2 bits (95), Expect = 0.49
Identities = 27/86 (31%), Positives = 45/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 6 LDHLKNYHR-RYCRSSRAPNIHTKKGQNMLEILQDCFEDQSKASFLDDFTESLTSSTQKK 64
LDHLK Y+R R+C I+ + GQN+L+ +QDCFE ++ + + TSS+
Sbjct: 16 LDHLKKYYRARFCGQG-GKKINIQPGQNVLKYIQDCFECDDTDVTIN--SPNATSSSTPL 186
Query: 65 KANYSQSSSKKCPESHSKPVPVSSRT 90
N ++S++ + V +RT
Sbjct: 187VRNQERTSTQSPRPDAGLTIVVGNRT 264
>dbj|AB004649.1|AB004649 Gallus gallus mRNA for CENP-C, complete cds
Length = 2952
Score = 189 bits (480), Expect = 1e-45
Identities = 182/709 (25%), Positives = 304/709 (42%), Gaps = 59/709 (8%)
Frame = +1
Query: 256 PFSPPPPSD--MKLLEDEXXXXXXXXXXXXXLWVMIPSKDRHLS---AHKPSPENTALLQ 310
P SP P D +++ D W IP K+R + P ++ + +
Sbjct: 586 PSSPSPVKDHNVEIESDCEFLIDESGCLSFKSWFSIPRKNRKSQKDGSAAPVLKSQSSDK 765
Query: 311 GKKSREKSHSLSAMTFARNTQSDKAHPIE-EAQLSVEENPATTCTDELENDCRSPENKMQ 369
K + +K +++ + Q K ++ + + + E +P ++ +++ + ++KMQ
Sbjct: 766 EKTADKKGKNMNVQAEVHSEQKTKNVRVQRDLKRTSESHPVSS-----DSEGKVLKSKMQ 930
Query: 370 SET--AKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSN----------------V 411
S T K+ + + + ++++S AE+L E S+
Sbjct: 931 SSTHAGKSKKDALKGSSKHRKKMSYESEAEQLMLSGLDSETSDGEQKIRRVMPREDLAVP 1110
Query: 412 SNTGQDTLQINSKRNMKDCEEVRNEPNPKKQKPALENKRKTNSTQTXXXXXXXXXXXXXX 471
S Q ++SK+N+ C+ ++ ++ + ++T + T
Sbjct: 1111 SAEHQQEQMLSSKKNLTPCKYQQSASKAYQRSVHKKQTKQTLANDTVLKSQR-------- 1266
Query: 472 XXXXVPKKVTLTXXXXXXXXXXXXEWWRVKSD--ESSVDRNPSKENNSPVVYPNKKKQTK 529
KK+ + W S+ E ++R P + N P+++ QT
Sbjct: 1267 ------KKLKKSGKRNGNKNPEPRRWKSSDSEPGEEGLEREPLESNEMFTSPPHQELQT- 1425
Query: 530 RNHVSKRAGKKPGSSKRQKTEMSPRVQKSLNVKDSGGTVSGH-------------DDTSR 576
S QK S + +K L+ +S V+ D
Sbjct: 1426 --------------SVLQKLAKSEKAEKVLHALESVTDVNNKTPLKAVELLQHLVDSMKN 1563
Query: 577 SQRKPLKIIEADPTQKSLAISRPKRGCKY-RNNVMTSPNVHLKSHTEEYTSKTQMESA-- 633
S++K + + K + KR C R++ + S E K + +SA
Sbjct: 1564 SEKKRSSVTSSGKMLKKVHHRAHKRACSITRDSEPQNTTDSDSSSAPEVARKKRRQSAVR 1743
Query: 634 -------------SNSEMSKRSVWEESGP--SRFKNYEMPGSSNSEMGDEQDQKSLHFTT 678
+S +++++ ESG + Y P S + E +E S
Sbjct: 1744 ASKKPKSNRHQRLQHSPAAEKAMGPESGLVLEHSEKYTSP-SKHCEENNESSDNSEDLHC 1920
Query: 679 RSFNMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRGERVDYQESSSGQLVLEIISP 738
+ N++ D+ K+VLPSN+PNVRR+ RIRLKPLEYWRGERV Y SG+L++ I+
Sbjct: 1921 QIKNLLSDEIGRQKIVLPSNTPNVRRTKRIRLKPLEYWRGERVTYTLKPSGRLLISGIAG 2100
Query: 739 SSVPTKIKAQRNLGKVNKKVTKKPTHLNSHEKAKMELP--LDMRLGDPFQATLAKDPETA 796
+ +K NK K H K + E+ LD+ L D + T DP T
Sbjct: 2101 AEAEPHMK--------NKL---KSRHKKKRAKTRSEVVKCLDIPLADASKPTSIVDPVTN 2247
Query: 797 ELVPMDLIRPRDTYRFFVEQHGLKVFKTLDTIYFSTGKLVLGPYEEKGKQHVGQDILVFY 856
+ V ++ I ++ F E +KV+K+L+T F+ GKL+L P +EKG Q V D + FY
Sbjct: 2248 QEVLLECINSGSSHSCFFEDESIKVYKSLNTSDFAAGKLILKPLKEKGHQFVHMDTIAFY 2427
Query: 857 VNFGDLLCTLHETPYKLTTGDSFYVPSGNHYNIKNLLNVESSLLFTQIK 905
V G ++ TLH+T Y LT+GD FYVP+GN YNI+NLLN ES L FTQ+K
Sbjct: 2428 VIRGQIITTLHKTSYYLTSGDYFYVPAGNGYNIRNLLNEESVLHFTQLK 2574
Score = 41.2 bits (95), Expect = 0.49
Identities = 27/86 (31%), Positives = 45/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 6 LDHLKNYHR-RYCRSSRAPNIHTKKGQNMLEILQDCFEDQSKASFLDDFTESLTSSTQKK 64
LDHLK Y+R R+C I+ + GQN+L+ +QDCFE ++ + + TSS+
Sbjct: 43 LDHLKKYYRARFCGQG-GKKINIQPGQNVLKYIQDCFECDDTDVTIN--SPNATSSSTPL 213
Query: 65 KANYSQSSSKKCPESHSKPVPVSSRT 90
N ++S++ + V +RT
Sbjct: 214 VRNQERTSTQSPRPDAGLTIVVGNRT 291
>gb|AC104806.3| Homo sapiens chromosome 4 clone RP11-584P21, complete sequence
Length = 147777
Score = 125 bits (313), Expect = 3e-26
Identities = 81/198 (40%), Positives = 105/198 (52%), Gaps = 4/198 (2%)
Frame = -3
Query: 251 HTAAVPFSPPPPSDMKLLEDEXXXXXXXXXXXXXLWVMIPSKDRHLSAHKPSP-ENTALL 309
H A P PP D KL+EDE W+ IP K L SP E+TALL
Sbjct: 122719 HAATAPPHSCPPDDTKLIEDEFIIDESDQSFASRSWITIPRKAGSLKQRTISPAESTALL 122540
Query: 310 QGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEE--NPATTCTDELENDCRSPENK 367
QG+KSREK H++ T A + S K HP+E +Q S + + + E N+ RS + +
Sbjct: 122539 QGRKSREKHHNILPKTLANDKHSHKPHPVETSQPSDKTVLDTSYALIGETVNNYRSTKYE 122360
Query: 368 MQSETAKTPPAWERTTKQSQRRVSKPKAAEE-LRKGQSSWENSNVSNTGQDTLQINSKRN 426
M S+ A+ P +RT KQ QRR K AEE L GQS EN + S+ QD Q NS RN
Sbjct: 122359 MYSKNAEKPSRSKRTIKQKQRRKFMAKPAEEQLDVGQSKDENIHTSHITQDEFQRNSDRN 122180
Query: 427 MKDCEEVRNEPNPKKQKP 444
M++ EE+ N+ KKQ P
Sbjct: 122179 MEEHEEMGNDCVSKKQMP 122126
Score = 90.1 bits (222), Expect = 9e-16
Identities = 41/54 (75%), Positives = 49/54 (89%)
Frame = -3
Query: 801 MDLIRPRDTYRFFVEQHGLKVFKTLDTIYFSTGKLVLGPYEEKGKQHVGQDILV 854
+DL+RP+DTY+FFV+ LKV+KTLDT +FSTGKL+LGP EEKGKQHVGQDILV
Sbjct: 98170 LDLVRPQDTYQFFVKHGELKVYKTLDTPFFSTGKLILGPQEEKGKQHVGQDILV 98009
Score = 66.6 bits (161), Expect = 1e-08
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = -3
Query: 690 HHKLVLPSNSPNVRRSNRIRLKPLEYWRGERVDYQESSSGQLVL 733
H +VLPSN+PNVRR+ R RLKPLEYWRGER+DYQ SG+ L
Sbjct: 102046 HLFIVLPSNTPNVRRTKRTRLKPLEYWRGERIDYQGRPSGKTYL 101915
Score = 66.2 bits (160), Expect = 1e-08
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = -3
Query: 854 VFYVNFGDLLCTLHETPYKLTTGDSFYVPSG 884
VFYVNFGDLLCTLHETPY L+TGDSFYVPSG
Sbjct: 83023 VFYVNFGDLLCTLHETPYILSTGDSFYVPSG 82931
Score = 53.1 bits (126), Expect = 1e-04
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = -3
Query: 176 RLNFEDKVTSSTAETENSVLQVEDNLSKGQEGTSSEITQKR-DDLSSDVQSRSKKNFSEL 234
RLNF+DKV E +N V ED S+GQE S +Q R D ++Q ++KK+FS L
Sbjct: 126415 RLNFDDKVMLKKIEIDNKVSDEEDKTSEGQERKPSGSSQNRIRDSEYEIQRQAKKSFSTL 126236
Query: 235 FLET 238
FLET
Sbjct: 126235 FLET 126224
Score = 52.8 bits (125), Expect = 2e-04
Identities = 39/87 (44%), Positives = 50/87 (56%), Gaps = 4/87 (4%)
Frame = -3
Query: 510 NPSKENNSPVVYPNKKKQTKR-NHVSKRAGKKPGSSKRQKTEM--SPRVQKSLNVKDSGG 566
N S N P+ + + +K TK+ N SK KK KRQKT + RVQK LN + SGG
Sbjct: 117136 NSSVRNELPMHHNSSRKSTKKTNQSSKNIRKKTIPLKRQKTATKGNQRVQKFLNAEGSGG 116957
Query: 567 TVSGHDDTSR-SQRKPLKIIEADPTQK 592
V GHD+ SR S +PL+ EAD +K
Sbjct: 116956 IV-GHDEISRCSLSEPLESDEADLAKK 116879
Score = 46.6 bits (109), Expect = 0.012
Identities = 26/68 (38%), Positives = 36/68 (52%)
Frame = -1
Query: 112 NEVHHGASDELDLCVGSPVVLLDANVNTLQKAASPAGQKRVASVSRSPVDRQASNKNISF 171
N+ H A +E L VGSP VLLDA + Q + QKR + V+ S+ +S
Sbjct: 127455 NDHHSEADEEFYLSVGSPSVLLDAKTSVSQNVIPSSAQKRETYTFENSVNMLPSSTEVSV 127276
Query: 172 KTRKRLNF 179
KT+KR +F
Sbjct: 127275 KTKKR*HF 127252
Score = 40.8 bits (94), Expect = 0.64
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 15/68 (22%)
Frame = -1
Query: 854 VFYVNFGDLL--CTLHE-----TPYKLTTGDSFY--------VPSGNHYNIKNLLNVESS 898
+ Y G+L C L+ T Y + DS+ + GN+YNIKNL N ES
Sbjct: 80856 ISYFRLGELFLSCVLYYNCQVMTTYLIKKNDSYVNNFYFLITLLLGNYYNIKNLRNEESV 80677
Query: 899 LLFTQIKR 906
LLFTQIKR
Sbjct: 80676 LLFTQIKR 80653
Score = 40.4 bits (93), Expect = 0.83
Identities = 18/45 (40%), Positives = 31/45 (68%)
Frame = -1
Query: 727 SSGQLVLEIISPSSVPTKIKAQRNLGKVNKKVTKKPTHLNSHEKA 771
S G ++ ++SP ++ +K KA+ N+GKVNKK KK L++ E++
Sbjct: 101046 SGGFVISGVLSPDTISSKRKAKENIGKVNKKSNKKRICLDNDERS 100912
>gb|L30105.1|MUSCENP Mus musculus (clone xs72) Cenpc pseudogene fragment
Length = 250
Score = 108 bits (270), Expect(2) = 3e-25
Identities = 54/63 (85%), Positives = 55/63 (86%)
Frame = +3
Query: 285 LWVMIPSKDRHLSAHKPSPENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLS 344
LWVMI KDRHLS HKPSPENTALLQG+KSREKSHSLSA TF RNTQ D AHPI EAQLS
Sbjct: 9 LWVMIARKDRHLSPHKPSPENTALLQGRKSREKSHSLSATTFVRNTQCD*AHPIGEAQLS 188
Query: 345 VEE 347
VEE
Sbjct: 189 VEE 197
Score = 33.9 bits (76), Expect(2) = 3e-25
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +2
Query: 348 NPATTCTDELENDCRSPE 365
N TT TDELENDCRSPE
Sbjct: 197 NLGTT*TDELENDCRSPE 250
>dbj|AB042324.1|AB042324 Gallus gallus CENP-C gene for centromere protein CENP-C, complete cds
Length = 27630
Score = 64.7 bits (156), Expect = 4e-08
Identities = 30/38 (78%), Positives = 32/38 (83%)
Frame = +1
Query: 692 KLVLPSNSPNVRRSNRIRLKPLEYWRGERVDYQESSSG 729
KLVLPSN+PNVRR+ RIRLKPLEYWRGERV Y SG
Sbjct: 14869 KLVLPSNTPNVRRTKRIRLKPLEYWRGERVTYTLKPSG 14982
Score = 46.6 bits (109), Expect = 0.012
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +3
Query: 800 PMDLIRPRDTYRFFVEQHGLKVFKTLDTIYFSTGKLVLGPYEEKGKQHVGQDILV 854
P + I ++ F E +KV+K+L+T F+ GKL+L P +EKG Q V D +V
Sbjct: 18774 PAECINSGSSHSCFFEDESIKVYKSLNTSDFAAGKLILKPLKEKGHQFVHMDTIV 18938
Score = 46.2 bits (108), Expect = 0.015
Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +1
Query: 852 ILVFYVNFGDLLCTLHETPYKLTTGDSFYVPSGNHYNIK-NLLNVE 896
I FYV G ++ TLH+T Y LT+GD FYVP+G ++K NLL +
Sbjct: 19840 IKAFYVIRGQIITTLHKTSYYLTSGDYFYVPAGKCMSLKTNLLGAD 19977
>dbj|AK020042.1|AK020042 Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length
enriched library, clone:5930434L05:centromere
autoantigen C, full insert sequence
Length = 312
Score = 51.6 bits (122), Expect = 4e-04
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +1
Query: 882 PSGNHYNIKNLLNVESSLLFTQIKR 906
PSGNHYNIK LLNVESSLLFTQIKR
Sbjct: 4 PSGNHYNIKTLLNVESSLLFTQIKR 78
>emb|X88927.1|XLNOPP180 X.laevis mRNA for xNopp180
Length = 3432
Score = 51.2 bits (121), Expect = 5e-04
Identities = 123/635 (19%), Positives = 205/635 (31%), Gaps = 8/635 (1%)
Frame = +1
Query: 134 DANVNTLQKAASPAGQKRVASVSRSPVDRQASNKNISFKTRKRLNFEDKVTSSTAETENS 193
DA + A A K+ +S S S +SN+ + K + + T++T +
Sbjct: 1186 DAKSTPVAAAKKSAPAKKASSSSDSD---SSSNEETTTKPAAKTTPAKSAATPTSKTPTN 1356
Query: 194 VLQVEDNLSKGQEGTSSEITQKRDDLSSDVQSRSKKNFSELFLETXXXXXXXXXXXXHTA 253
+ + + GT T K+D SSD S E +A
Sbjct: 1357 GKATPTSKTPAKPGTPKTSTAKKDSSSSDSSDSSSD-------EETTTKPAAKTTPAKSA 1515
Query: 254 AVPFSPPPPSDMKLLEDEXXXXXXXXXXXXXLWVMIPSKDRHLSAHKPSPENTALLQGKK 313
A P S P + SK S P+ T K
Sbjct: 1516 ATPTSKTPTN---------------------------SKATPTSKKTPAKPGTP----KT 1602
Query: 314 SREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELENDCRSPENKMQSETA 373
S K S S+ + ++ +K P + A + PA T A
Sbjct: 1603 SAAKKDS-SSSDSSDSSSDEKKTPAKRAAKTTPAKPAAKTTP-------------AKPAA 1740
Query: 374 KTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQINSKRNMKDCEEV 433
KT PA KP A K + + S+ S++ + + K + K V
Sbjct: 1741 KTTPA-------------KPAAKSTPGKQVPTKKESSSSDSSDSSSEDEKKSSAKPA--V 1875
Query: 434 RNEPNPKKQKPALENK----RKTNSTQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXXX 489
+ P KP + +K +K +S+ P TL
Sbjct: 1876 KTTPGKATSKPVVASKPVPAKKASSSSDSDSSEEETTKTTKPLTKLSPAVKTLPPKKAES 2055
Query: 490 XXXXXXEWWRVKSDESSVDRNPSKENNSPV--VYPNKKKQTKRNHVSKRAGKKPGSSKRQ 547
+ S++ + P ++ +PV P + K +K + + + +Q
Sbjct: 2056 SSDSSSD---SDSEKKTKPAKPPAKSATPVNTKAPAQNKASKASCSDSDSSSEEEGKSKQ 2226
Query: 548 KTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRN 607
T SP + + K + V+ +S S E +++ A K+G K
Sbjct: 2227 PTGKSPAAKATAPPKKNPVAVNKDKPSSSSSSDSSGDDEKQKPKQAAAAKDVKQGAK--- 2397
Query: 608 NVMTSPNVHLKSHTEEYTSKTQMESA--SNSEMSKRSVWEESGPSRFKNYEMPGSSNSEM 665
+P S +E+ +S + A +N+ +SK V K SS+SE
Sbjct: 2398 AAKPTPKKAASSSSEDSSSDEDVSKAKKTNTAVSKSPVTTPKAVPAAKKESSSESSDSE- 2574
Query: 666 GDEQDQKSLHFTTRSFNMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRGERVDYQE 725
DE+ TT+ N P S+S + ++N G +
Sbjct: 2575 -DEKQGGKNTSTTKIANSTPKAAAAECSEESSSSEDEGKAN-----------GTSGKRKR 2718
Query: 726 SSSGQLVLEIISPSSVPTKIKAQRNLGKVNKKVTK 760
S+G E ++P + K K+ KVNKK K
Sbjct: 2719 ESTGNAECEAVTPENKKLKAKSPNTFPKVNKKELK 2823
>ref|NM_022869.1| Rattus norvegicus nucleolar phosphoprotein p130 (Nopp140), mRNA
Length = 3609
Score = 48.1 bits (113), Expect = 0.004
Identities = 92/542 (16%), Positives = 180/542 (32%), Gaps = 25/542 (4%)
Frame = +2
Query: 156 SRSPVDRQASNKNISFKTRKRLNFEDKVTSSTAETENSVLQVEDNLSKGQEGTSSEITQK 215
+++P + SN ++ K +K + D S+ E + + + + + + + + K
Sbjct: 233 TKAPKVKLQSNGPVAKKAKKETSSSDSSEDSSEEEDKAQVPTQKAAAPAKRASLPQHAGK 412
Query: 216 RDDLSSDVQSRSKKNFSELFLETXXXXXXXXXXXXHTAAVPFSPPPPSDMKLLEDEXXXX 275
+S+ S + + E + AV PPP + E E
Sbjct: 413 AAAKASESSSSEESSEEEEEKDKKKKPVQQKAVKPQAKAVR---PPPKKAESSESESDSS 583
Query: 276 XXXXX------XXXXLWVMIPSKDRHLSAHKPSPENTA---LLQGKKSREKSHSLSAMTF 326
P+K + + KP P A GK S S S+ +
Sbjct: 584 SEDEAPQTQKPKAAATAAKAPTKAQTKAPAKPGPPAKAQPKAANGKAGSSSSSSSSSSSD 763
Query: 327 ARNTQSDKAHPIEE--------AQLSVEENPATTCTDELENDCRSPENKMQSETAK---- 374
+ A P+++ A+ V+ A T D S E + Q + K
Sbjct: 764 DSEEEKKAAAPLKKTAPKKQVVAKAPVKVTAAPTQKSSSSEDSSSEEEEEQKKPMKKKAG 943
Query: 375 ----TPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQINSKRNMKDC 430
PP +K+S S KAA + + SS ++S S++ + + + +
Sbjct: 944 PYSSVPPPSVSLSKKSVGAQSPKKAAAQTQPADSSADSSEESDSSSEEEKKTPAKTVVSK 1123
Query: 431 EEVRNEPNPKKQKPALENKRKTNSTQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXXXX 490
+ P KK + + ++ +S PK
Sbjct: 1124TPAKPAPVKKKAESSSDSSDSDSSEDEAPAKPVSATKSPLSKPAVTPKPPAAKAVATPKQ 1303
Query: 491 XXXXXEWWRVKSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQKTE 550
+ K D + S+E +S ++++ TK++ + +A ++ +
Sbjct: 1304PAGSGQ----KPQSRKADSSSSEEESS----SSEEEATKKSVTTPKARVTAKAAPSLPAK 1459
Query: 551 MSPRVQKSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNVM 610
+PR +GG S ++S S+ + + +K+ + PK
Sbjct: 1460QAPR---------AGGDSSSDSESSSSEEEKKTPPKPPAKKKAAGAAVPK---------- 1582
Query: 611 TSPNVHLKSHTEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGSSNSEMGDEQD 670
P K+ E +S + E +S E K P K +P S N + G E +
Sbjct: 1583--PTPVKKAAAESSSSSSSSEDSSEEEKKKPKSKATPKPQAGKANGVPASQNGKAGKESE 1756
Query: 671 QK 672
++
Sbjct: 1757EE 1762
>gb|M94287.1|RATNOP140A Rattus norvegicus nucleolar phosphoprotein of 140kD, Nopp140 mRNA,
complete cds
Length = 3609
Score = 48.1 bits (113), Expect = 0.004
Identities = 92/542 (16%), Positives = 180/542 (32%), Gaps = 25/542 (4%)
Frame = +2
Query: 156 SRSPVDRQASNKNISFKTRKRLNFEDKVTSSTAETENSVLQVEDNLSKGQEGTSSEITQK 215
+++P + SN ++ K +K + D S+ E + + + + + + + + K
Sbjct: 233 TKAPKVKLQSNGPVAKKAKKETSSSDSSEDSSEEEDKAQVPTQKAAAPAKRASLPQHAGK 412
Query: 216 RDDLSSDVQSRSKKNFSELFLETXXXXXXXXXXXXHTAAVPFSPPPPSDMKLLEDEXXXX 275
+S+ S + + E + AV PPP + E E
Sbjct: 413 AAAKASESSSSEESSEEEEEKDKKKKPVQQKAVKPQAKAVR---PPPKKAESSESESDSS 583
Query: 276 XXXXX------XXXXLWVMIPSKDRHLSAHKPSPENTA---LLQGKKSREKSHSLSAMTF 326
P+K + + KP P A GK S S S+ +
Sbjct: 584 SEDEAPQTQKPKAAATAAKAPTKAQTKAPAKPGPPAKAQPKAANGKAGSSSSSSSSSSSD 763
Query: 327 ARNTQSDKAHPIEE--------AQLSVEENPATTCTDELENDCRSPENKMQSETAK---- 374
+ A P+++ A+ V+ A T D S E + Q + K
Sbjct: 764 DSEEEKKAAAPLKKTAPKKQVVAKAPVKVTAAPTQKSSSSEDSSSEEEEEQKKPMKKKAG 943
Query: 375 ----TPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQINSKRNMKDC 430
PP +K+S S KAA + + SS ++S S++ + + + +
Sbjct: 944 PYSSVPPPSVSLSKKSVGAQSPKKAAAQTQPADSSADSSEESDSSSEEEKKTPAKTVVSK 1123
Query: 431 EEVRNEPNPKKQKPALENKRKTNSTQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXXXX 490
+ P KK + + ++ +S PK
Sbjct: 1124TPAKPAPVKKKAESSSDSSDSDSSEDEAPAKPVSATKSPLSKPAVTPKPPAAKAVATPKQ 1303
Query: 491 XXXXXEWWRVKSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQKTE 550
+ K D + S+E +S ++++ TK++ + +A ++ +
Sbjct: 1304PAGSGQ----KPQSRKADSSSSEEESS----SSEEEATKKSVTTPKARVTAKAAPSLPAK 1459
Query: 551 MSPRVQKSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNVM 610
+PR +GG S ++S S+ + + +K+ + PK
Sbjct: 1460QAPR---------AGGDSSSDSESSSSEEEKKTPPKPPAKKKAAGAAVPK---------- 1582
Query: 611 TSPNVHLKSHTEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGSSNSEMGDEQD 670
P K+ E +S + E +S E K P K +P S N + G E +
Sbjct: 1583--PTPVKKAAAESSSSSSSSEDSSEEEKKKPKSKATPKPQAGKANGVPASQNGKAGKESE 1756
Query: 671 QK 672
++
Sbjct: 1757EE 1762
>dbj|AP002057.1|AP002057 Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T19N8
Length = 73391
Score = 47.0 bits (110), Expect = 0.009
Identities = 89/495 (17%), Positives = 174/495 (34%), Gaps = 8/495 (1%)
Frame = +1
Query: 161 DRQASNKNISFKTRKRLNFEDKVTSSTAETENSVLQVEDNLSKGQEGTSSEITQKRDDLS 220
D++ K+ K+RK+ EDK E +NS + ED K ++ ++ +K D
Sbjct: 19879 DKKEKKKHEESKSRKKE--EDKKDMEKLEDQNSNKKKEDKNEK-KKSQHVKLVKKESDKK 20049
Query: 221 SDVQSRSKKNFSELFLETXXXXXXXXXXXXHTAAVPFSPPPPSDMKLLEDEXXXXXXXXX 280
++ K E+ E+ ++ +MK E++
Sbjct: 20050 EKKENEEKSETKEI--ESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEEDR 20223
Query: 281 XXXXLWVMIPSKDRHLSAHKPSPEN-----TALLQGKKSREKSHSLSAMTFARN---TQS 332
V K + K P++ T GKK +S S A ++ TQ+
Sbjct: 20224 KKQTS-VEENKKQKETKKEKNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQA 20400
Query: 333 DKAHPIEEAQLSVEENPATTCTDELENDCRSPENKMQSETAKTPPAWERTTKQSQRRVSK 392
D E + + + + ++D E MQ+++ T ++ Q V++
Sbjct: 20401 DSDESKNEILMQADSQADSHSDSQADSDESKNEILMQADSQATTQRNNEEDRKKQTSVAE 20580
Query: 393 PKAAEELRKGQSSWENSNVSNTGQDTLQINSKRNMKDCEEVRNEPNPKKQKPALENKRKT 452
K +E ++ ++ ++ + T Q K+ + E E K Q + ++
Sbjct: 20581 NKKQKETKEEKNKPKDDKKNTTKQS----GGKKESMESESKEAENQQKSQATTQADSDES 20748
Query: 453 NSTQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXXXXXXXXXEWWRVKSDESSVDRNPS 512
+ K L E R K ++SV N
Sbjct: 20749 KNEILMQADSQADSHSDSQADSDESKNEILMQADSQATTQRNNEEDRKK--QTSVAEN-- 20916
Query: 513 KENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHD 572
K+ NK K K+N + GKK K ++ N + S T G
Sbjct: 20917 KKQKETKEEKNKPKDDKKNTTEQSGGKKESMESESK--------EAENQQKSQATTQGES 21072
Query: 573 DTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLKSHTEEYTSKTQMES 632
D S+++ +++AD + A S+ + +N ++ + S T+ SK ++
Sbjct: 21073 DESKNE----ILMQADSQADTHANSQGDSD-ESKNEILMQADSQADSQTDSDESKNEILM 21237
Query: 633 ASNSEMSKRSVWEES 647
++S+ ++ +ES
Sbjct: 21238 QADSQADSQTDSDES 21282
>ref|NM_113798.1| Arabidopsis thaliana chromosome 3 CHR3v12152001 genomic sequence
Length = 6246
Score = 47.0 bits (110), Expect = 0.009
Identities = 89/495 (17%), Positives = 174/495 (34%), Gaps = 8/495 (1%)
Frame = +1
Query: 161 DRQASNKNISFKTRKRLNFEDKVTSSTAETENSVLQVEDNLSKGQEGTSSEITQKRDDLS 220
D++ K+ K+RK+ EDK E +NS + ED K ++ ++ +K D
Sbjct: 3292 DKKEKKKHEESKSRKKE--EDKKDMEKLEDQNSNKKKEDKNEK-KKSQHVKLVKKESDKK 3462
Query: 221 SDVQSRSKKNFSELFLETXXXXXXXXXXXXHTAAVPFSPPPPSDMKLLEDEXXXXXXXXX 280
++ K E+ E+ ++ +MK E++
Sbjct: 3463 EKKENEEKSETKEI--ESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEEDR 3636
Query: 281 XXXXLWVMIPSKDRHLSAHKPSPEN-----TALLQGKKSREKSHSLSAMTFARN---TQS 332
V K + K P++ T GKK +S S A ++ TQ+
Sbjct: 3637 KKQTS-VEENKKQKETKKEKNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQA 3813
Query: 333 DKAHPIEEAQLSVEENPATTCTDELENDCRSPENKMQSETAKTPPAWERTTKQSQRRVSK 392
D E + + + + ++D E MQ+++ T ++ Q V++
Sbjct: 3814 DSDESKNEILMQADSQADSHSDSQADSDESKNEILMQADSQATTQRNNEEDRKKQTSVAE 3993
Query: 393 PKAAEELRKGQSSWENSNVSNTGQDTLQINSKRNMKDCEEVRNEPNPKKQKPALENKRKT 452
K +E ++ ++ ++ + T Q K+ + E E K Q + ++
Sbjct: 3994 NKKQKETKEEKNKPKDDKKNTTKQS----GGKKESMESESKEAENQQKSQATTQADSDES 4161
Query: 453 NSTQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXXXXXXXXXEWWRVKSDESSVDRNPS 512
+ K L E R K ++SV N
Sbjct: 4162 KNEILMQADSQADSHSDSQADSDESKNEILMQADSQATTQRNNEEDRKK--QTSVAEN-- 4329
Query: 513 KENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHD 572
K+ NK K K+N + GKK K ++ N + S T G
Sbjct: 4330 KKQKETKEEKNKPKDDKKNTTEQSGGKKESMESESK--------EAENQQKSQATTQGES 4485
Query: 573 DTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLKSHTEEYTSKTQMES 632
D S+++ +++AD + A S+ + +N ++ + S T+ SK ++
Sbjct: 4486 DESKNE----ILMQADSQADTHANSQGDSD-ESKNEILMQADSQADSQTDSDESKNEILM 4650
Query: 633 ASNSEMSKRSVWEES 647
++S+ ++ +ES
Sbjct: 4651 QADSQADSQTDSDES 4695
>ref|NM_101434.1| Arabidopsis thaliana chromosome 1 CHR1v12152001 genomic sequence
Length = 2133
Score = 46.6 bits (109), Expect = 0.012
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Frame = +1
Query: 609 VMTSPNVHLKSHTEEYTSKTQMESASNSEMSKRS--VWEESG--------PSRFKNYEMP 658
V +P VH SH + T+K + +S+S + KRS V E+G P + +
Sbjct: 1630 VENAPEVHKYSHKQ--TNKRRKRGSSDSNVKKRSKTVHGETGGDKQMKTLPHESRAKKQT 1803
Query: 659 GSSNSEMGDEQDQKSLHFTTRSFNMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRG 718
++E +++ +K+L + F+ + VRRS RI+ +PLEYWRG
Sbjct: 1804 KGKSNEREEKKPKKTLTHEGKLFSCRKSLAAAGTKI----EGGVRRSTRIKSRPLEYWRG 1971
Query: 719 ERVDY---QESSSGQLVLEIISP 738
ER Y ES + + ++ SP
Sbjct: 1972 ERFLYGRIHESLTTVIGIKYASP 2040
>gb|M94288.1|RATNOP140B Rattus norvegicus nucleolar phosphoprotein of 140kD, Nopp140 mRNA,
complete cds
Length = 3235
Score = 45.8 bits (107), Expect = 0.020
Identities = 95/544 (17%), Positives = 181/544 (32%), Gaps = 27/544 (4%)
Frame = +3
Query: 156 SRSPVDRQASNKNISFKTRKRLNFEDKVTSSTAETENSVLQVEDNLSKGQEGTSSEITQK 215
+++P + SN ++ K +K + D S+ E + + + + + + + + K
Sbjct: 984 TKAPKVKLQSNGPVAKKAKKETSSSDSSEDSSEEEDKAQVPTQKAAAPAKRASLPQHAGK 1163
Query: 216 RDDLSSDVQSRSKKNFSELFLETXXXXXXXXXXXXHTAAVPFSPPPP--------SDMKL 267
+S+ S + + E E A PPP SD
Sbjct: 1164 AAAKASESSSSEESSEEE---EEKDKKKKPVQKAVKPQAKAVRPPPKKAESSESESDSSS 1334
Query: 268 LEDEXXXXXXXXXXXXXLWVMIPSKDRHLSAHKPSPENTA---LLQGKKSREKSHSLSAM 324
EDE P+K + + KP P A GK S S S+
Sbjct: 1335 -EDEAPQTQKPKAAATA--AKAPTKAQTKAPAKPGPPAKAQPKAANGKAGSSSSSSSSSS 1505
Query: 325 TFARNTQSDKAHPIEE--------AQLSVEENPATTCTDELENDCRSPENKMQSETAK-- 374
+ + A P+++ A+ V+ A T D S E + Q + K
Sbjct: 1506 SDDSEEEKKAAAPLKKTAPKKQVVAKAPVKVTAAPTQKSSSSEDSSSEEEEEQKKPMKKK 1685
Query: 375 ------TPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQINSKRNMK 428
PP +K+S S KAA + + SS ++S S++ + + + +
Sbjct: 1686 AGPYSSVPPPSVSLSKKSVGAQSPKKAAAQTQPADSSADSSEESDSSSEEEKKTPAKTVV 1865
Query: 429 DCEEVRNEPNPKKQKPALENKRKTNSTQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXX 488
+ P KK + + ++ +S PK
Sbjct: 1866 SKTPAKPAPVKKKAESSSDSSDSDSSEDEAPAKPVSATKSPLSKPAVTPKPPAAKAVATP 2045
Query: 489 XXXXXXXEWWRVKSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQK 548
+ K D + S+E +S ++++ TK++ + +A ++
Sbjct: 2046 KQPAGSGQ----KPQSRKADSSSSEEESS----SSEEEATKKSVTTPKARVTAKAAPSLP 2201
Query: 549 TEMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNN 608
+ +PR +GG S ++S S+ + + +K+ + PK
Sbjct: 2202 AKQAPR---------AGGDSSSDSESSSSEEEKKTPPKPPAKKKAAGAAVPK-------- 2330
Query: 609 VMTSPNVHLKSHTEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGSSNSEMGDE 668
P K+ E +S + E +S E K P K +P S N + G E
Sbjct: 2331 ----PTPVKKAAAESSSSSSSSEDSSEEEKKKPKSKATPKPQAGKANGVPASQNGKAGKE 2498
Query: 669 QDQK 672
+++
Sbjct: 2499 SEEE 2510
>gb|AY052127.1| Drosophila melanogaster SD07741 full length cDNA
Length = 3682
Score = 45.8 bits (107), Expect = 0.020
Identities = 94/523 (17%), Positives = 182/523 (33%), Gaps = 25/523 (4%)
Frame = +2
Query: 287 VMIPSKDRH-----LSAHKPSPENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEA 341
V PS++R +A+ ++ + KK ++++ SA + + K H E
Sbjct: 788 VRTPSRERDRDAGDAAANGDERDHVSKTDKKKRKKRARESSASPERKKKKKSKKHKKESK 967
Query: 342 QLSVE-------ENPATTCTDELENDCRSPENKMQSETAKTPPAWERTTKQSQRRVSKPK 394
+ E+ + D E D S E + +S+ + ++ K ++R K K
Sbjct: 968 SKKKKSRKRKHSESGRDSDRDSDEEDDSSEEERRESKNVR-----KKAKKDKKKRDKKLK 1132
Query: 395 AAEELRKGQSSWENSNVSNTGQDTLQINSKRNMKDCEEVRNEPNPKKQKPALENKRKTNS 454
R S E +N + K N D N ++ P EN ++ S
Sbjct: 1133 KKSRARASSSDSERTNSPSR---------KENKSDRSRGANASKSDEKAPQQENVMRSRS 1285
Query: 455 TQTXXXXXXXXXXXXXXXXXXVPKK---VTLTXXXXXXXXXXXXEWWRVKSDESSVDRNP 511
+ P++ T + R K S DR
Sbjct: 1286 RERKDTRSSRPLEASIDSRQRKPRERSAATPPRKEPERHRERSKDRQRSKEKHRSRDRLR 1465
Query: 512 SKENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSLNVKDSGGTVSGH 571
S+E + ++ +R+ +R+ ++ S +RQ++ R ++ K+
Sbjct: 1466 SRERQ-------RSRERQRSRERQRSKERQRSKERQRSIERQRSKERQRSKER------- 1603
Query: 572 DDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLKSHTEEYTSKTQME 631
RS+ K + P SR +R K ++ S H ++ K +
Sbjct: 1604 ---QRSRSKDALRCKEKPQSNEKERSRERRRSKSKDR-QRSKEKHRPKDEKQTLDKRRDR 1771
Query: 632 SASNSEMSKRSVWEESGPSRFKNYEMPGSSNSEMGDEQ----------DQKSLHFTTRSF 681
S S+ ++RS + R ++ E S + + E+ D++ L RS
Sbjct: 1772 STDRSKENQRSNERQRSKERQRSKERERSKDRQRSRERRRSKERQLSKDRQGLKERQRS- 1948
Query: 682 NMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRGERVDYQESSSGQLVLEIISPSSV 741
+++ K PS R + +PL+ D Q S Q E + +
Sbjct: 1949 ----NERKRSKERQPSKEKQRSRERQRSREPLQ-----SKDRQRSKERQRSRERPAKEAR 2101
Query: 742 PTKIKAQRNLGKVNKKVTKKPTHLNSHEKAKMELPLDMRLGDP 784
PT+ +R+ + + + PT+ + +K +L + R P
Sbjct: 2102 PTRSPRERSSKSRDDRRHRSPTNASRKQKDDTKLSRNARFKSP 2230
>gb|U33058.1|CEU33058 Caenorhabditis elegans UNC-89 (unc-89) gene, complete cds
Length = 46638
Score = 45.4 bits (106), Expect = 0.026
Identities = 74/398 (18%), Positives = 139/398 (34%), Gaps = 16/398 (4%)
Frame = +2
Query: 339 EEAQLSVEENPATTCTDELENDCRSPENKMQSETAKTPPAWERTTKQS------QRRVSK 392
E++ VEE PA+ E + + K K+P E++ ++S +
Sbjct: 25331 EKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKS 25510
Query: 393 PKAAEELRKGQSSWENSNVSNTGQDTLQINSKRNMKDCEEVRNEPNPKKQKPALENKRKT 452
P+ A++ K + E S + +D +K + P ++KP K+++
Sbjct: 25511 PEKADDKPKSPTKKEKSPEKSATED---------VKSPTKKEKSPEKVEEKPTSPTKKES 25663
Query: 453 NSTQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXXXXXXXXXEWWRVKSDESSVDRNPS 512
+ T+ K+D+ ++P+
Sbjct: 25664 SPTK--------------------------------------------KTDDEV--KSPT 25705
Query: 513 KENNSPVVY------PNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSLNVKDSGG 566
K+ SP P KK+++ V + K P +K E P KS K+
Sbjct: 25706 KKEKSPQTVEEKPASPTKKEKSPEKSVVEEV-KSPKEKSPEKAEEKP---KSPTKKEKSP 25873
Query: 567 TVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLKSHTEEYTS 626
S ++ +K + + + A +PK K ++ + + +KS T++ S
Sbjct: 25874 EKSAAEEVKSPTKK-------EKSPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKS 26032
Query: 627 KTQMESASNSEMSKRSVWEESGPSRFKN----YEMPGSSNSEMGDEQDQKSLHFTTRSFN 682
++E S K E+S K+ + P S + GDE +KS
Sbjct: 26033 PEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPK 26212
Query: 683 MVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRGER 720
KK P SP ++S + +++ R ER
Sbjct: 26213 SPTPKK------SPPGSPKKKKSKSPEAEKVKFGRVER 26308
>gb|AF003131.1| Caenorhabditis elegans cosmid C09D1, complete sequence
Length = 53848
Score = 45.4 bits (106), Expect = 0.026
Identities = 74/398 (18%), Positives = 139/398 (34%), Gaps = 16/398 (4%)
Frame = +2
Query: 339 EEAQLSVEENPATTCTDELENDCRSPENKMQSETAKTPPAWERTTKQS------QRRVSK 392
E++ VEE PA+ E + + K K+P E++ ++S +
Sbjct: 31241 EKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKS 31420
Query: 393 PKAAEELRKGQSSWENSNVSNTGQDTLQINSKRNMKDCEEVRNEPNPKKQKPALENKRKT 452
P+ A++ K + E S + +D +K + P ++KP K+++
Sbjct: 31421 PEKADDKPKSPTKKEKSPEKSATED---------VKSPTKKEKSPEKVEEKPTSPTKKES 31573
Query: 453 NSTQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXXXXXXXXXEWWRVKSDESSVDRNPS 512
+ T+ K+D+ ++P+
Sbjct: 31574 SPTK--------------------------------------------KTDDEV--KSPT 31615
Query: 513 KENNSPVVY------PNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSLNVKDSGG 566
K+ SP P KK+++ V + K P +K E P KS K+
Sbjct: 31616 KKEKSPQTVEEKPASPTKKEKSPEKSVVEEV-KSPKEKSPEKAEEKP---KSPTKKEKSP 31783
Query: 567 TVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLKSHTEEYTS 626
S ++ +K + + + A +PK K ++ + + +KS T++ S
Sbjct: 31784 EKSAAEEVKSPTKK-------EKSPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKS 31942
Query: 627 KTQMESASNSEMSKRSVWEESGPSRFKN----YEMPGSSNSEMGDEQDQKSLHFTTRSFN 682
++E S K E+S K+ + P S + GDE +KS
Sbjct: 31943 PEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPK 32122
Query: 683 MVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRGER 720
KK P SP ++S + +++ R ER
Sbjct: 32123 SPTPKK------SPPGSPKKKKSKSPEAEKVKFGRVER 32218
>ref|NM_059022.1| helicase
Length = 4080
Score = 45.1 bits (105), Expect = 0.034
Identities = 70/335 (20%), Positives = 126/335 (36%), Gaps = 32/335 (9%)
Frame = +1
Query: 292 KDRHLSAHKPSPENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPAT 351
K + + S E + + KK++EKS A T + + +K P ++++ +++ +
Sbjct: 445 KQTSSESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEK--PSKKSKKGLKKKAKS 618
Query: 352 TCTDELENDCRSPENKMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNV 411
E E++ ++K +S+ + +S+ + K E+ ++ ++S E S+
Sbjct: 619 ESESESEDEKEVKKSKKKSKKVV------KKESESEDEAPEKKKTEKRKRSKTSSEESS- 777
Query: 412 SNTGQDTLQINSKRNMKDCEEVRNEPNPKKQKP------------------ALENKRKTN 453
S+++ ++ EE + P PKK+KP L K+K
Sbjct: 778 ----------ESEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEESEESDVEVLPQKKKRG 927
Query: 454 STQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXXXXXXXXXEWWRVKSDESSVDRNPSK 513
+ V +KV+ + K ESS + S
Sbjct: 928 AVTLISDSEDEKDQKSESEASDVEEKVSKK---------------KAKKQESSESGSDSS 1062
Query: 514 ENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQK-------TEMSPRVQKSLNVKDSGG 566
E + V N+K + K K+ G SSK QK E R + K+ G
Sbjct: 1063EGSITV---NRKSKKKEKPEKKKKGIIMDSSKLQKETIDAERAEKERRKRLEKKQKEFNG 1233
Query: 567 TV--SGHDDT-----SRSQRKPLKIIEADPTQKSL 594
V G D T + SQRK LK + DP ++
Sbjct: 1234IVLEEGEDLTEMLTGTSSQRK-LKSVVLDPDSSTV 1335
>gb|AF134186.1|AF134186 Caenorhabditis elegans XNP-1 (xnp-1) mRNA, complete cds
Length = 4326
Score = 45.1 bits (105), Expect = 0.034
Identities = 70/335 (20%), Positives = 126/335 (36%), Gaps = 32/335 (9%)
Frame = +1
Query: 292 KDRHLSAHKPSPENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPAT 351
K + + S E + + KK++EKS A T + + +K P ++++ +++ +
Sbjct: 469 KQTSSESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEK--PSKKSKKGLKKKAKS 642
Query: 352 TCTDELENDCRSPENKMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNV 411
E E++ ++K +S+ + +S+ + K E+ ++ ++S E S+
Sbjct: 643 ESESESEDEKEVKKSKKKSKKVV------KKESESEDEAPEKKKTEKRKRSKTSSEESS- 801
Query: 412 SNTGQDTLQINSKRNMKDCEEVRNEPNPKKQKP------------------ALENKRKTN 453
S+++ ++ EE + P PKK+KP L K+K
Sbjct: 802 ----------ESEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEESEESDVEVLPQKKKRG 951
Query: 454 STQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXXXXXXXXXEWWRVKSDESSVDRNPSK 513
+ V +KV+ + K ESS + S
Sbjct: 952 AVTLISDSEDEKDQKSESEASDVEEKVSKK---------------KAKKQESSESGSDSS 1086
Query: 514 ENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQK-------TEMSPRVQKSLNVKDSGG 566
E + V N+K + K K+ G SSK QK E R + K+ G
Sbjct: 1087EGSITV---NRKSKKKEKPEKKKKGIIMDSSKLQKETIDAERAEKERRKRLEKKQKEFNG 1257
Query: 567 TV--SGHDDT-----SRSQRKPLKIIEADPTQKSL 594
V G D T + SQRK LK + DP ++
Sbjct: 1258IVLEEGEDLTEMLTGTSSQRK-LKSVVLDPDSSTV 1359
>ref|NM_058889.1| immunoglobin-like protein
Length = 19929
Score = 42.7 bits (99), Expect = 0.17
Identities = 65/351 (18%), Positives = 124/351 (34%), Gaps = 16/351 (4%)
Frame = +1
Query: 339 EEAQLSVEENPATTCTDELENDCRSPENKMQSETAKTPPAWERTTKQS------QRRVSK 392
E++ VEE PA+ E + + K K+P E++ ++S +
Sbjct: 4690 EKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKS 4869
Query: 393 PKAAEELRKGQSSWENSNVSNTGQDTLQINSKRNMKDCEEVRNEPNPKKQKPALENKRKT 452
P+ A++ K + E S + +D +K + P ++KP K+++
Sbjct: 4870 PEKADDKPKSPTKKEKSPEKSATED---------VKSPTKKEKSPEKVEEKPTSPTKKES 5022
Query: 453 NSTQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXXXXXXXXXEWWRVKSDESSVDRNPS 512
+ T+ K+D+ ++P+
Sbjct: 5023 SPTK--------------------------------------------KTDDEV--KSPT 5064
Query: 513 KENNSPVVY------PNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSLNVKDSGG 566
K+ SP P KK+++ V + K P +K E P KS K+
Sbjct: 5065 KKEKSPQTVEEKPASPTKKEKSPEKSVVEEV-KSPKEKSPEKAEEKP---KSPTKKEKSP 5232
Query: 567 TVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLKSHTEEYTS 626
S ++ +K + + + A +PK K ++ + + +KS T++ S
Sbjct: 5233 EKSAAEEVKSPTKK-------EKSPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKS 5391
Query: 627 KTQMESASNSEMSKRSVWEESGPSRFKN----YEMPGSSNSEMGDEQDQKS 673
++E S K E+S K+ + P S + GDE +KS
Sbjct: 5392 PEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKEKS 5544
>ref|NM_120839.1| Arabidopsis thaliana chromosome 5 CHR5v12152001 genomic sequence
Length = 4515
Score = 42.7 bits (99), Expect = 0.17
Identities = 56/268 (20%), Positives = 99/268 (36%), Gaps = 6/268 (2%)
Frame = -2
Query: 502 SDESSVDRNPSKENNSPVVYPNKKKQTKR-NHVSKRAGKKPGSSKRQKTEMSPRVQKSLN 560
S++ + + + +K + P P K +K + S ++ KP S K P+ + S
Sbjct: 1664 SNKPTTNPSSTKPKSKPSSKPTSKPSSKPISKPSTKSTSKPSSKSTSKPSTKPKSKPSSK 1485
Query: 561 VKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLKSH 620
+ +++S KP + PT K +S K K + T P V
Sbjct: 1484 PTSKPSSKPISKPSTKSTSKP----SSKPTSKPSTVSASKPSSKPTSKPSTKPTV---KP 1326
Query: 621 TEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGSSN-----SEMGDEQDQKSLH 675
T + TSK+ ++ + +S + S K P S + ++ ++ K +
Sbjct: 1325 TPKPTSKSTANPSTTKPTTTKSTSKPSSKPSSKPSTKPTSKSVVKPSTKPTNKPVTKPIS 1146
Query: 676 FTTRSFNMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRGERVDYQESSSGQLVLEI 735
T P K K P+ P + S++ KP+ + S S + +
Sbjct: 1145 KPTTKSIAKPSSKEAGK---PTTRPTIEPSSKPTTKPVAKPISKSTTKPISKS--VAKPV 981
Query: 736 ISPSSVPTKIKAQRNLGKVNKKVTKKPT 763
P+S PTK + K K KPT
Sbjct: 980 RKPTSKPTKKSEAKPTSKTTVKPVAKPT 897
>gb|AF129857.2|AF129857 Zea mays CENPCA protein (CenpcA) mRNA, complete cds
Length = 2238
Score = 42.7 bits (99), Expect = 0.17
Identities = 42/207 (20%), Positives = 78/207 (37%), Gaps = 5/207 (2%)
Frame = +1
Query: 537 AGKKPGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAI 596
A K+ G + + +++ Q+ +N + G S P K + Q+
Sbjct: 1480 AVKEGGVLQDKSSQLLEMPQEDINPLNQAQMHGGSTKKSAPDLSPTKQKKQQAVQERKRK 1659
Query: 597 SRPKRGCKYRNNVMTSPNVHLKSHTEEYTSKTQME--SASNSEMSKRSVWEESGPSRFKN 654
+ KRG K + P + +S + + +E + ++S +S + G R +N
Sbjct: 1660 QQSKRGKKVAGESLEIPQTNFESENQPHNDDVNIEKQTITSSTLSPNGAKGQKGAQR-RN 1836
Query: 655 YEMPGSSNSEMGDEQDQKSLHFTTRSFNMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLE 714
+ +GD + P VR+S+R R +PLE
Sbjct: 1837 QTKKRNQRKILGDAD--------------------------LACQPGVRKSSRTRSRPLE 1938
Query: 715 YWRGERVDY---QESSSGQLVLEIISP 738
YW GER+ Y ++ G + ++ SP
Sbjct: 1939 YWLGERLLYGPIHDNLHGAIGIKAYSP 2019
>emb|AL109834.1|SPBC1861 S.pombe chromosome II cosmid c1861
Length = 23851
Score = 42.4 bits (98), Expect = 0.22
Identities = 51/228 (22%), Positives = 95/228 (41%), Gaps = 4/228 (1%)
Frame = -1
Query: 501 KSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSLN 560
K S V N S++ + P+K+ + K + G KP +S+ + +E+S + L+
Sbjct: 1123 KPRRSYVQNNKSEQT----IKPSKQNKQKEEKKTISQGNKP-NSRDEDSELS--IDVPLS 965
Query: 561 VKDSGGTVSGHDDTSRSQRKPLK--IIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLK 618
+ + + + R+ KPL+ I + +S + + KRG +N + +V
Sbjct: 964 MLNRSLANNSQKNKKRTPNKPLQESSINSVKEGESNPVVKRKRGRPRKNKLEIGNSV--- 794
Query: 619 SHTEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGSSNSEMGDEQDQKSLHF-- 676
+ + TQ++ A P+ +M + + + D S F
Sbjct: 793 ----QTSEATQVKGAKK-------------PAIRNAKKMSNEKDDSLNSQSDSASGEFIK 665
Query: 677 TTRSFNMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRGERVDYQ 724
T N+ K++ + L VRRS R R+ PL +W+ ERV Y+
Sbjct: 664 TIARNNLQEIKQVEREDTLVG----VRRSKRTRIAPLAFWKNERVVYE 533
>emb|Z18294.1|SCMIF2A Saccharomyces cerevisiae of MIF2 gene
Length = 2161
Score = 42.4 bits (98), Expect = 0.22
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 42/245 (17%)
Frame = +2
Query: 702 VRRSNRIRLKPLEYWRGERVDYQESSSGQLVLEIISPSSVPTKIKAQRNL-GKVNKKVTK 760
+R+S R+++ PL+YWR E++ Y+ S+ + VL+I + + L + KK K
Sbjct: 1124 LRKSTRVKVAPLQYWRNEKIVYKRKSN-KPVLDIDKIVTYDESEDEEEILAAQRRKKQKK 1300
Query: 761 KPTHLNSHEKAKMELPLDMRLGDP--FQATLAKDP-------------ETAELVPMDLI- 804
KPT + P DP + + +DP E E + ++
Sbjct: 1301 KPTPTRPYNYVPTGRPRGRPKKDPNAKENLIPEDPNEDIIERIESGGIENGEWLKHGILE 1480
Query: 805 ----------RPRDTYRFFV--------------EQHGLKVFKTLDTIYFSTGKLVLGPY 840
+D F E L++ YF++G L L
Sbjct: 1481 ANVKISDTKEETKDEIIAFAPNLSQTEQVKDTKDENFALEIMFDKHKEYFASGILKLPAI 1660
Query: 841 E-EKGKQHVGQDILVFYVNFGDLLCTLHETPYKLTTGDSFYVPSGNHYNIKNLLNVESSL 899
+K + + + F+V G + T+ + + G +F +P+ N Y I N N E+ +
Sbjct: 1661 SGQKKLSNSFRTYITFHVIQGIVEVTVCKNKFLSVKGSTFQIPAFNEYAIANRGNDEAKM 1840
Query: 900 LFTQI 904
F Q+
Sbjct: 1841 FFVQV 1855
>emb|Z28089.1|SCYKL089W S.cerevisiae chromosome XI reading frame ORF YKL089w
Length = 2073
Score = 42.4 bits (98), Expect = 0.22
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 42/245 (17%)
Frame = +2
Query: 702 VRRSNRIRLKPLEYWRGERVDYQESSSGQLVLEIISPSSVPTKIKAQRNL-GKVNKKVTK 760
+R+S R+++ PL+YWR E++ Y+ S+ + VL+I + + L + KK K
Sbjct: 1034 LRKSTRVKVAPLQYWRNEKIVYKRKSN-KPVLDIDKIVTYDESEDEEEILAAQRRKKQKK 1210
Query: 761 KPTHLNSHEKAKMELPLDMRLGDP--FQATLAKDP-------------ETAELVPMDLI- 804
KPT + P DP + + +DP E E + ++
Sbjct: 1211 KPTPTRPYNYVPTGRPRGRPKKDPNAKENLIPEDPNEDIIERIESGGIENGEWLKHGILE 1390
Query: 805 ----------RPRDTYRFFV--------------EQHGLKVFKTLDTIYFSTGKLVLGPY 840
+D F E L++ YF++G L L
Sbjct: 1391 ANVKISDTKEETKDEIIAFAPNLSQTEQVKDTKDENFALEIMFDKHKEYFASGILKLPAI 1570
Query: 841 E-EKGKQHVGQDILVFYVNFGDLLCTLHETPYKLTTGDSFYVPSGNHYNIKNLLNVESSL 899
+K + + + F+V G + T+ + + G +F +P+ N Y I N N E+ +
Sbjct: 1571 SGQKKLSNSFRTYITFHVIQGIVEVTVCKNKFLSVKGSTFQIPAFNEYAIANRGNDEAKM 1750
Query: 900 LFTQI 904
F Q+
Sbjct: 1751 FFVQV 1765
>gb|AF129859.1|AF129859 Zea mays CENPCC protein (CenpcC) mRNA, partial cds
Length = 1432
Score = 42.0 bits (97), Expect = 0.29
Identities = 39/189 (20%), Positives = 70/189 (36%), Gaps = 2/189 (1%)
Frame = +2
Query: 537 AGKKPGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAI 596
A K+ G + + +++ Q+ +N + G S P K + Q+
Sbjct: 770 AVKEGGVLQDKSSQLLKMPQEDINPLNQAQMHGGSTKKSAPDLSPTKQKKQQAVQERKRK 949
Query: 597 SRPKRGCKYRNNVMTSPNVHLKSHTEEYTSKTQME--SASNSEMSKRSVWEESGPSRFKN 654
+ KRG K + P + +S + + +E + ++S +S + G R +N
Sbjct: 950 QQSKRGKKVAGESLEIPQTNFESENQPHNDDVNIEKQTITSSTLSPNGAKGQKGAQR-RN 1126
Query: 655 YEMPGSSNSEMGDEQDQKSLHFTTRSFNMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLE 714
+ +GD + P VR+S+R R +PLE
Sbjct: 1127QTKKRNQRKILGDAD--------------------------LACQPGVRKSSRTRSRPLE 1228
Query: 715 YWRGERVDY 723
YW GER+ Y
Sbjct: 1229YWLGERLLY 1255
>gb|AF129858.1|AF129858 Zea mays CENPCB protein (CenpcB) mRNA, partial cds
Length = 1495
Score = 42.0 bits (97), Expect = 0.29
Identities = 33/102 (32%), Positives = 48/102 (46%), Gaps = 5/102 (4%)
Frame = +3
Query: 627 KTQMESASNSEMSKRSVWEESGPSRFK-NYEMPGSSNSEMGDEQDQKSLHFTTRSFNMVP 685
K ES+ E+S+ + E+ P N E P +S G + Q+
Sbjct: 942 KVSDESSHALEISQANFEPENEPHNVDVNMEQPTVMSSAKGQKGAQRRNK---------- 1091
Query: 686 DKKLHHKLVLP----SNSPNVRRSNRIRLKPLEYWRGERVDY 723
KKL+ + +L + VRRS+RIR +PLEYW GER+ Y
Sbjct: 1092 TKKLNQRKILGDVDLARQSGVRRSSRIRSRPLEYWLGERLLY 1217
>emb|Z69728.1|SPAC56F8 S.pombe chromosome I cosmid c56F8
Length = 37093
Score = 41.6 bits (96), Expect = 0.37
Identities = 66/333 (19%), Positives = 120/333 (35%), Gaps = 17/333 (5%)
Frame = +1
Query: 331 QSDKAHPIEEAQLSVEENPATTCTDELENDCR--------SPENKMQSETAKTPPAWERT 382
+ D+ IE Q +E A T D+ E D + +N +SE A P E
Sbjct: 8299 EDDEPQEIESPQ-GPKELTAVTELDDDEFDYKPKKGKKGKKAQNNNESEAAAPPEIPEVR 8475
Query: 383 TKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQINSKRNMKDCEEVRNEPNPKKQ 442
K + + + K E+LRK Q + +TG+DTL + + D + K
Sbjct: 8476 VKTKKEKEREKKEREKLRKKQQQAKKKG--STGEDTLASSEVSSEVDISTPAENDSSAKG 8649
Query: 443 KPALENKRKTNSTQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXXXXXXXXXEWWRVKS 502
K A +KRK VT E R++
Sbjct: 8650 KQAAGSKRK-------------------------GPNVTALQKMLEEKRAREEEEQRIRE 8754
Query: 503 DESSVDRNPSK------ENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQ 556
+E+ + + K+K+ K+ K GK SK+QK + + +
Sbjct: 8755 EEARIAEEEKRLAEVEEARKEEARLKKKEKERKKKEEMKAQGKY--LSKKQKEQQALAQR 8928
Query: 557 KSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQ---KSLAISRPKRGCKYRNNVMTSP 613
+ + +SG V+G + + Q KP+ + + S++ S + + P
Sbjct: 8929 RLQQMLESGVRVAGLSNGEKKQ-KPVYTNKKKSNRSGTSSISSSGILESSPATSISVDEP 9105
Query: 614 NVHLKSHTEEYTSKTQMESASNSEMSKRSVWEE 646
K +E+ +T++E +E +V+++
Sbjct: 9106 QKDSKDDSEKVEKETEVERKEENEAEAEAVFDD 9204
>emb|AL353012.1|SPBC1711 S.pombe chromosome II cosmid c1711
Length = 38000
Score = 41.2 bits (95), Expect = 0.49
Identities = 62/363 (17%), Positives = 124/363 (34%)
Frame = +1
Query: 312 KKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELENDCRSPENKMQSE 371
K+S EKS+ S + +KAH EA S + E+D S E++ SE
Sbjct: 10489 KESLEKSNDDSQKISKKGAPPEKAHSSSEASGSGSSSD--------ESDSSSSESESSSE 10644
Query: 372 TAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQINSKRNMKDCE 431
+ + + +S S ++ + +SS E S+ S++ + S+ + +D +
Sbjct: 10645 DNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSS---ESESSSEDND 10815
Query: 432 EVRNEPNPKKQKPALENKRKTNSTQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXXXXX 491
+ + + + + ++ ++S+ + + +
Sbjct: 10816 SSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSS 10995
Query: 492 XXXXEWWRVKSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQKTEM 551
E SD SS + E++S K + N SS +
Sbjct: 10996 DSESESSSEDSDSSSSSSDSESESSS------KDSDSSSNSSDSEDDSSSDSSDSESESS 11157
Query: 552 SPRVQKSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNVMT 611
S + + DS + S D S + + A + S + S K +
Sbjct: 11158 SEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTS-SEESTSVKDED---- 11322
Query: 612 SPNVHLKSHTEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGSSNSEMGDEQDQ 671
S +H KS ++ S +S +K PS++ ++ P ++ E D
Sbjct: 11323 SSKIHDKSLKRKHEDDESSTSTKSSRTTKTPFTRVGDPSQW-DFASPALRDNSFNFEDDY 11499
Query: 672 KSL 674
+L
Sbjct: 11500 GTL 11508
>gb|AC073883.32| Mus musculus chromosome 3 clone rp23-71e13, complete sequence
Length = 211376
Score = 41.2 bits (95), Expect = 0.49
Identities = 30/147 (20%), Positives = 63/147 (42%)
Frame = -1
Query: 310 QGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELENDCRSPENKMQ 369
Q KK RE+ + + +K EE + EE E E + + E + +
Sbjct: 199760 QRKKEREEEEEEEEEEKEKEEEKEKEEEEEEEEEEEEE--------EEEEEEKEKEKEKE 199605
Query: 370 SETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQINSKRNMKD 429
E K ++ K+ +++ K K ++ +K + + + N ++ + +K+N K+
Sbjct: 199604 KEKEKEKEKEKKKKKKKKKKKKKKKKKKKKKKNKKKKKKNKKKNKNKNKKKNKNKKNKKN 199425
Query: 430 CEEVRNEPNPKKQKPALENKRKTNSTQ 456
+ +N+ N K+ NK+K N +
Sbjct: 199424 KKNKKNKKNKNKK-----NKKKKNKNK 199359
>gb|K02113.1|CHKVITB Gallus gallus vitellogenin gene coding for phosvitin, exons 23 and
24
Length = 1515
Score = 41.2 bits (95), Expect = 0.49
Identities = 50/223 (22%), Positives = 78/223 (34%), Gaps = 7/223 (3%)
Frame = +2
Query: 521 YPNKKKQTKRNHVSKRAGKKPGS--SKRQKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQ 578
+P + K N V G +P + S + S S + S D+ Q
Sbjct: 149 HPKNRPSKKGNTVLAEFGTEPDAKTSSSSSSASSTATSSSSSSASSPNRKKPMDEEENDQ 328
Query: 579 RKPLKIIEADPTQKSLAISRPKR--GCKYRNNVMTSPNVHLKSHTEEYTSKTQMESASNS 636
K + +A + +S S + K N+ S + S + +S + S+SNS
Sbjct: 329 VKQARNKDASSSSRSSKSSNSSKRSSSKSSNSSKRSSSSSSSSSSSSRSSSSSSSSSSNS 508
Query: 637 EMSKRSVWEESGPSRFKNYEMPGSSNSEMGDEQDQKSLHFTTRSFNMVPDKK---LHHKL 693
+ S S S SR ++ SS+S KS + S + HH
Sbjct: 509 KSSSSSSKSSSSSSRSRSSSKSSSSSSSSSSSSSSKSSSSRSSSSSSKSSSHHSHSHHSG 688
Query: 694 VLPSNSPNVRRSNRIRLKPLEYWRGERVDYQESSSGQLVLEII 736
L +S + S + E+ G D SSS VL I
Sbjct: 689 HLNGSSSSSSSSRSVSHHSHEHHSGHLEDDSSSSSSSSVLSKI 817
>emb|X13607.1|GGVITIIG Chicken vitellogenin II gene
Length = 20343
Score = 41.2 bits (95), Expect = 0.49
Identities = 50/223 (22%), Positives = 78/223 (34%), Gaps = 7/223 (3%)
Frame = +3
Query: 521 YPNKKKQTKRNHVSKRAGKKPGS--SKRQKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQ 578
+P + K N V G +P + S + S S + S D+ Q
Sbjct: 11085 HPKNRPSKKGNTVLAEFGTEPDAKTSSSSSSASSTATSSSSSSASSPNRKKPMDEEENDQ 11264
Query: 579 RKPLKIIEADPTQKSLAISRPKR--GCKYRNNVMTSPNVHLKSHTEEYTSKTQMESASNS 636
K + +A + +S S + K N+ S + S + +S + S+SNS
Sbjct: 11265 VKQARNKDASSSSRSSKSSNSSKRSSSKSSNSSKRSSSSSSSSSSSSRSSSSSSSSSSNS 11444
Query: 637 EMSKRSVWEESGPSRFKNYEMPGSSNSEMGDEQDQKSLHFTTRSFNMVPDKK---LHHKL 693
+ S S S SR ++ SS+S KS + S + HH
Sbjct: 11445 KSSSSSSKSSSSSSRSRSSSKSSSSSSSSSSSSSSKSSSSRSSSSSSKSSSHHSHSHHSG 11624
Query: 694 VLPSNSPNVRRSNRIRLKPLEYWRGERVDYQESSSGQLVLEII 736
L +S + S + E+ G D SSS VL I
Sbjct: 11625 HLNGSSSSSSSSRSVSHHSHEHHSGHLEDDSSSSSSSSVLSKI 11753
>emb|AL114081.1|CNS01BD5 Botrytis cinerea strain T4 cDNA library under conditions of
nitrogen deprivation
Length = 696
Score = 40.8 bits (94), Expect = 0.64
Identities = 41/204 (20%), Positives = 76/204 (37%), Gaps = 5/204 (2%)
Frame = -3
Query: 501 KSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVS-----KRAGKKPGSSKRQKTEMSPRV 555
K+ + +N K+ KKKQTK+ K+ KK K+QKT+ +
Sbjct: 685 KTKKKKKKKNKKKKKKKKKKQHKKKKQTKKKKKKTKKKKKKTQKKKKKKKKQKTKNKKKT 506
Query: 556 QKSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNV 615
+K+ N K + ++KP K + +K+ + K+ K +
Sbjct: 505 KKTKNTKQKKKQTKTKKKKQKHKKKPKK--KKKQXKKTKKKTTKKKKTKKKKKKQKKKKK 332
Query: 616 HLKSHTEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGSSNSEMGDEQDQKSLH 675
K T+++ K Q + K+ ++ + KN P + + Q +
Sbjct: 331 XKKQKTKKHKQKNQTK--------KKXKQKKXNQKKKKN---PTQTQXQXHKTTQQXTXT 185
Query: 676 FTTRSFNMVPDKKLHHKLVLPSNS 699
T ++N +P + PSNS
Sbjct: 184 XXTXTYNHIP--------IHPSNS 137
Score = 39.3 bits (90), Expect = 1.9
Identities = 28/144 (19%), Positives = 59/144 (40%)
Frame = -1
Query: 499 RVKSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKS 558
+ K + +N +K+ N K+K+ K+ H K+ KK +K+QKT+ + QK+
Sbjct: 660 KTKKKKKKKKKNNTKKKNKQKKKKKKQKKKKKKHKKKKKKKK---NKKQKTKKKQKKQKT 490
Query: 559 LNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLK 618
N K + + ++ +K K + +K + K+ K + N K
Sbjct: 489 QNKKKNKQKQKKKNKNTKKNQKKKKNXKKKQKKKQQKKKKQKKKKKNKKKKKXKKNKKQK 310
Query: 619 SHTEEYTSKTQMESASNSEMSKRS 642
+ ++ K ++ K++
Sbjct: 309 NTNKKTKQKKXKNKKKXTKKKKKT 238
>emb|AL117078.1|CNS01DOE Botrytis cinerea strain T4 cDNA library under conditions of
nitrogen deprivation
Length = 600
Score = 40.4 bits (93), Expect = 0.83
Identities = 32/131 (24%), Positives = 50/131 (37%), Gaps = 5/131 (3%)
Frame = -3
Query: 331 QSDKAHPIEEAQLSVEENPATTCTDELENDCRSPENKMQSETAKTPPAWERTTKQSQRRV 390
Q K +P + ++NP N P+NK Q + P + K
Sbjct: 556 QQKKKNPQTPPTNTPKKNPTQKTHKNTNNKHTQPKNKNQHKHKNKTPQKNKKHKNPHPNK 377
Query: 391 SKPKAAEELR-----KGQSSWENSNVSNTGQDTLQINSKRNMKDCEEVRNEPNPKKQKPA 445
K K + + K Q++ +N+ NT Q T Q K K ++ + KK KP
Sbjct: 376 KKTKTQQNNKHKKNTKTQTTTKNTKTHNTXQKTKQNKKKHQHK--KQKQQPTTNKKTKPT 203
Query: 446 LENKRKTNSTQ 456
K+ TN+ Q
Sbjct: 202 NNTKQNTNNQQ 170
>gb|AE001337.1|AE001337 Chlamydia trachomatis section 64 of 87 of the complete genome
Length = 13324
Score = 40.4 bits (93), Expect = 0.83
Identities = 35/138 (25%), Positives = 59/138 (42%)
Frame = +1
Query: 314 SREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELENDCRSPENKMQSETA 373
S+E+ + TQS A +EE + S ++N + E+ +SPEN+ Q + +
Sbjct: 1417 SQEQPKQTTPSGSGEPTQSQNAS-MEENRTSPDQNQQPQLSSASESGSQSPENQEQ-QPS 1590
Query: 374 KTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQINSKRNMKDCEEV 433
+TPP T + S +P +A E S E ++V+ G K +D E
Sbjct: 1591 QTPPPSPETPEPS----GEPNSATE-ENSPSPMEKASVTEEGSSGTSEEEKEGEEDTAES 1755
Query: 434 RNEPNPKKQKPALENKRK 451
PK + E K++
Sbjct: 1756 AANEEPKAEASQEEEKKE 1809
>emb|AL112778.1|CNS01ACY Botrytis cinerea strain T4 cDNA library under conditions of
nitrogen deprivation
Length = 780
Score = 40.0 bits (92), Expect = 1.1
Identities = 35/146 (23%), Positives = 61/146 (40%), Gaps = 14/146 (9%)
Frame = -1
Query: 510 NPSKENNSP--VVYPNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSLNVKDS--- 564
N K+NN NKKK+TK+N K+ KK + K++K + + +K K +
Sbjct: 771 NKKKKNNKKKKTQTNNKKKKTKKNTKQKKTTKKKKNXKKKKKKQNKPNKKKTKPKKNKKT 592
Query: 565 --GGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNVM-------TSPNV 615
T H+ T + Q+ K + T+K ++PK+ K + T P
Sbjct: 591 KKKKTQKKHNKTKKKQKNHKKKKTKNKTKKKQK-NKPKKKKKKKKTKKNQTKKQNTKPKP 415
Query: 616 HLKSHTEEYTSKTQMESASNSEMSKR 641
++ T++ K Q + N K+
Sbjct: 414 KQQNQTQKQNKKNQKKKKHNKNTKKK 337
>gb|AC093196.1| Drosophila melanogaster, chromosome 2L, region 30B-30F, BAC clone
BACR22H06, complete sequence
Length = 173188
Score = 40.0 bits (92), Expect = 1.1
Identities = 69/381 (18%), Positives = 130/381 (34%), Gaps = 30/381 (7%)
Frame = -3
Query: 297 SAHKPSPENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDE 356
+ H+P+ + + L+ + S +A T T E + P+T+ T
Sbjct: 117428 TTHEPTTQKSTTLRITEEPTTRKSSTARTTREPTTK------RETTERTTQEPSTSKTTT 117267
Query: 357 LENDCRSPENKMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQ 416
E K E R T++ R K A+ R+ + E + +
Sbjct: 117266 HETTAEPATKKTTHEPTTQKSTTLRITEEPTTR--KSSTAKTTREPTTKRETTERTTKEP 117093
Query: 417 DTLQINSKRNMKD--CEEVRNEPNPKKQ---KPALE-NKRKTNSTQTXXXXXXXXXXXXX 470
T + + + ++ ++ +EP KK KP E RKT++T+T
Sbjct: 117092 TTRKTTTHKTTEEPTTKKTTHEPTTKKSTTLKPTEEPTTRKTSTTKTTREPTTKRKTTER 116913
Query: 471 XXXXXVPKKVTL--TXXXXXXXXXXXXEWWRVKSDESSVDRNPSKENNSPVVYPNK--KK 526
+K T T + + + S P++E + K ++
Sbjct: 116912 TTKEPTTRKTTTHKTTEEPTTNKTTTKKTTHEPTTKKSTTLKPTEEPTTRKTSTTKTTRE 116733
Query: 527 QTKRNHVSKRAGKKPGSSKR-----------QKTEMSPRVQKSLNVKDSGGTVSGHDDTS 575
T + ++R ++P +SK +KT P QKS ++ + + T+
Sbjct: 116732 PTTKRETTERTTQEPSTSKTTTHETTAEPATKKTTHEPTTQKSTTLRITEEPTTRKSSTA 116553
Query: 576 RSQRKPLKIIEA------DPTQKSLAISRPKR---GCKYRNNVMTSPNVHLKSHTEEYTS 626
++ R+P E +PT + + K + T + LK E T
Sbjct: 116552 KTTREPTTKRETTERTTKEPTTRKTTTHKTTEEPTTKKTTHEPTTKKSTTLKPTEEPTTR 116373
Query: 627 KTQMESASNSEMSKRSVWEES 647
KT + +KR E +
Sbjct: 116372 KTSTTKTTREPTTKRKTTERT 116310
Score = 38.1 bits (87), Expect = 4.1
Identities = 69/381 (18%), Positives = 132/381 (34%), Gaps = 30/381 (7%)
Frame = -3
Query: 297 SAHKPSPENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDE 356
+ H+P+ + + L K + E + ++ T + K E + P+T+ T
Sbjct: 116828 TTHEPTTKKSTTL--KPTEEPTTRKTSTTKTTREPTTKRETTERTT----QEPSTSKTTT 116667
Query: 357 LENDCRSPENKMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQ 416
E K E R T++ R K A+ R+ + E + +
Sbjct: 116666 HETTAEPATKKTTHEPTTQKSTTLRITEEPTTR--KSSTAKTTREPTTKRETTERTTKEP 116493
Query: 417 DTLQINSKRNMKD--CEEVRNEPNPKKQ---KPALE-NKRKTNSTQTXXXXXXXXXXXXX 470
T + + + ++ ++ +EP KK KP E RKT++T+T
Sbjct: 116492 TTRKTTTHKTTEEPTTKKTTHEPTTKKSTTLKPTEEPTTRKTSTTKTTREPTTKRKTTER 116313
Query: 471 XXXXXVPKKVTL--TXXXXXXXXXXXXEWWRVKSDESSVDRNPSKENNSPVVYPNK--KK 526
+K T T + + + S P++E + K ++
Sbjct: 116312 TTKEPTTRKTTTHKTTEEPTTNKTTTKKTTHEPTTKKSTTLKPTEEPTTRKTSTTKTTRE 116133
Query: 527 QTKRNHVSKRAGKKPGSSKR-----------QKTEMSPRVQKSLNVKDSGGTVSGHDDTS 575
T + ++R ++P +SK +KT P QKS ++ + + T+
Sbjct: 116132 PTTKRVTTERTTREPTTSKTTTHETTAEPATKKTTHEPTTQKSTTLRITEEPTTRKSSTA 115953
Query: 576 RSQRKPLKIIEA------DPTQKSLAISRPKR---GCKYRNNVMTSPNVHLKSHTEEYTS 626
++ R+P E +PT + + K + T + LK E T
Sbjct: 115952 KTTREPTTKRETTERTTKEPTTRKTTTHKTTEEPTTKKTTHEPTTKKSTTLKPTEEPTTR 115773
Query: 627 KTQMESASNSEMSKRSVWEES 647
KT + +KR E +
Sbjct: 115772 KTSTTKTTREPTTKRKTTERT 115710
>emb|AL117024.1|CNS01DMW Botrytis cinerea strain T4 cDNA library under conditions of
nitrogen deprivation
Length = 720
Score = 40.0 bits (92), Expect = 1.1
Identities = 38/201 (18%), Positives = 78/201 (37%)
Frame = -1
Query: 501 KSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSLN 560
K +++ + K+N +KK+TK+N K+ KK +K++KT + +K N
Sbjct: 669 KQNKTKTKKKKKKQNQKQKKKTKQKKKTKKNKTHKKTKKKQNKNKKKKT---*KKKKKKN 499
Query: 561 VKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLKSH 620
K+ T + ++K +PT+K+ + P++ K + N +P +
Sbjct: 498 KKNKKKTKKKKKKKNHKKKKHKPKKHTNPTKKT--PTTPQKNKKTKQNNPQNPQKKQNNT 325
Query: 621 TEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGSSNSEMGDEQDQKSLHFTTRS 680
T++ K + + ++ + + N ++ + + +L T S
Sbjct: 324 TKKQPKKQTTNTTTKKTTPQKPTQTKQTQPKHXNTQLXTPTXXPTPXTKPSINLPSTIPS 145
Query: 681 FNMVPDKKLHHKLVLPSNSPN 701
P H PS PN
Sbjct: 144 PASSPWDP*SHNSTPPSPLPN 82
Score = 38.1 bits (87), Expect = 4.1
Identities = 31/137 (22%), Positives = 58/137 (41%), Gaps = 9/137 (6%)
Frame = -3
Query: 499 RVKSDESSVDRNPSKENNSPVVYPNKKKQTKRN--HVSKRAGKKPGSSKRQKTEMSPRVQ 556
+ K + +N K+N K+KQ K+N K+ KK +K++K + P+ +
Sbjct: 622 KTKKKNKTKKKNQKKQNTQKNKKKTKQKQKKKNIKKKKKKKQKKQKKNKKKKKKKKPQKK 443
Query: 557 KSL-------NVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNV 609
K+ N K++ T + ++ KP K + QK+ + K K N
Sbjct: 442 KTQTKKTHQPNKKNTNNTTKKQKNKTKQPTKPTKKTK-QHNQKTTKKTNNKHHNKKNNTT 266
Query: 610 MTSPNVHLKSHTEEYTS 626
T+ N + T ++T+
Sbjct: 265 KTNTNQTNPTQTPKHTT 215
>gb|M18060.1|CHKVITC Chicken vitellogenin gene, complete cds
Length = 5791
Score = 40.0 bits (92), Expect = 1.1
Identities = 49/223 (21%), Positives = 78/223 (34%), Gaps = 7/223 (3%)
Frame = +2
Query: 521 YPNKKKQTKRNHVSKRAGKKPGS--SKRQKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQ 578
+P + K N V G +P + S + S + + S D+ Q
Sbjct: 3311 HPKNRPSKKGNTVLAEFGTEPDAKTSSSSSSASSTATSSASSSASSPNRKKPMDEEENDQ 3490
Query: 579 RKPLKIIEADPTQKSLAISRPKR--GCKYRNNVMTSPNVHLKSHTEEYTSKTQMESASNS 636
K + +A + +S S + K N+ S + S + +S + S+SNS
Sbjct: 3491 VKQARNKDASSSSRSSKSSNSSKRSSSKSSNSSKRSSSSSSSSSSSSRSSSSSSSSSSNS 3670
Query: 637 EMSKRSVWEESGPSRFKNYEMPGSSNSEMGDEQDQKSLHFTTRSFNMVPDKK---LHHKL 693
+ S S S SR ++ SS+S KS + S + HH
Sbjct: 3671 KSSSSSSKSSSSSSRSRSSSKSSSSSSSSSSSSSSKSSSSRSSSSSSKSSSHHSHSHHSG 3850
Query: 694 VLPSNSPNVRRSNRIRLKPLEYWRGERVDYQESSSGQLVLEII 736
L +S + S + E+ G D SSS VL I
Sbjct: 3851 HLNGSSSSSSSSRSVSHHSHEHHSGHLEDDSSSSSSSSVLSKI 3979
>gb|M87306.1|TETMIHILIN Tetrahymena thermophila micronuclear linker histone polyprotein
(encoding linker histone proteins alpha, beta, delta and
gamma) (MLH) gene, complete cds
Length = 3000
Score = 39.7 bits (91), Expect = 1.4
Identities = 40/153 (26%), Positives = 69/153 (44%), Gaps = 3/153 (1%)
Frame = +1
Query: 524 KKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSLNVK---DSGGTVSGHDDTSRSQRK 580
+KKQTKR + + ++ + SS + K+ +S KS + K DS + +S ++RK
Sbjct: 1330 QKKQTKRKNSTSKSRR---SSSKGKSSVSKGRTKSTSSKRRADSSASQGRSQSSSSNRRK 1500
Query: 581 PLKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLKSHTEEYTSKTQMESASNSEMSK 640
+ T+ S SR K R N ++ S +SK + S+S ++ S
Sbjct: 1501 ASSSKD*KGTRSS---SRKASNSKGRKNSTSNKRNSSSSSKRSSSSKNKKSSSSKNKKSS 1671
Query: 641 RSVWEESGPSRFKNYEMPGSSNSEMGDEQDQKS 673
S +S SR + + S N + +D+KS
Sbjct: 1672 SSKGRKSSSSRGR--KASSSKNRKSSKSKDRKS 1764
>ref|NM_113278.1| Arabidopsis thaliana chromosome 3 CHR3v12152001 genomic sequence
Length = 1934
Score = 39.7 bits (91), Expect = 1.4
Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 24/210 (11%)
Frame = +1
Query: 549 TEMSPRVQKSLN------VKDSGGTVSGHDDTSRSQR--KPLKIIEADPTQKSLAISRPK 600
T S R KSL+ V S +V D T R PLK + A K+ A SR K
Sbjct: 475 TSSSSRCSKSLSQNITKPVSQSMDSVYDKDSTGSFCRDTSPLKSVIASTPNKNAAFSRGK 654
Query: 601 R-----GCKYRNNV-----MTSPNVHLKSHTEEYTSKTQMESASNSEMSKR----SVWEE 646
YR + + N + + +TEE S + S S++E ++ +V E
Sbjct: 655 LFKTPGSVNYRRMLPYLKDIQEDNPYPQKNTEEVISSPMLNSESDNEGTQEVVTSNVTRE 834
Query: 647 SGPSRFKNYEMPGSSNSEMGDEQDQKSLHFTTRSFNMVPDKKLHHKLVLPSNSPNV--RR 704
SG S +N E + EQ T+ +++PD + + +P +SP V R
Sbjct: 835 SGTSSDENEEPLPCERVPVNLEQSDPDKEQETQIKHVIPDTENNLGSEIPLSSPLVGSRS 1014
Query: 705 SNRIRLKPLEYWRGERVDYQESSSGQLVLE 734
S+ + L + + +E+ +G + E
Sbjct: 1015SSEVNSSALHNTFVDNLVGEENMNGAEITE 1104
>gb|AF154031.1|AF154031 Streptococcus pneumoniae strain g48s surface protein PspC (pspC)
gene, pspC-5.2 allele, complete cds
Length = 2968
Score = 39.7 bits (91), Expect = 1.4
Identities = 33/139 (23%), Positives = 57/139 (40%), Gaps = 9/139 (6%)
Frame = +1
Query: 310 QGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELENDCRSPENKMQ 369
+ K+ E+S +A + + ++ P A+ V AT D+ END P++ +
Sbjct: 1261 EAKRKAEESEKKAAGSQQKVVTKEQGKPKRRAKRGVSGELATP--DKKENDASLPDSSVG 1434
Query: 370 SETAKTPP-AWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQIN------ 422
ET +PP WE + ++ K AE+ Q + N TL++
Sbjct: 1435 EETLPSPPLIWEMKVSRHRKVEEAKKKAED----QKEEDRRNYPTNTYKTLELEIAESDV 1602
Query: 423 --SKRNMKDCEEVRNEPNP 439
K ++ +E EPNP
Sbjct: 1603 EVKKAELELVKEEAKEPNP 1659
>gb|AC008216.3|AC008216 Drosophila melanogaster, chromosome 3R, region 97E-97E, BAC clone
BACR27C22, complete sequence
Length = 179486
Score = 39.7 bits (91), Expect = 1.4
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
Frame = -3
Query: 524 KKKQTKRNH--VSKRAGKKPGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKP 581
KKK+ KR H K++ KK SK++K++ Q+S + S + D++S S
Sbjct: 75387 KKKKGKRKHKKSEKKSKKKSKKSKKKKSK-----QESSSSSSSSSSEDSSDESSSSSSSS 75223
Query: 582 LKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLKSHTEEYTSKTQMESASNSEMSKR 641
E + ++ + + + G K +S S ++ + K + + S +E SK+
Sbjct: 75222 SSDSEDESEEEDVWLEKTADGIKKPKKKKSS-----TSKKDKKSKKKKKKRKSEAEKSKK 75058
Query: 642 SVWEESGPSRFKNYEMPGSSNSEMG 666
S S S+ KN E ++ ++G
Sbjct: 75057 S--SSSSASKSKNKESASHNDEDVG 74989
>gb|AE003759.1|AE003759 Drosophila melanogaster genomic scaffold 142000013386035 section 84 of
105, complete sequence
Length = 226471
Score = 39.7 bits (91), Expect = 1.4
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
Frame = -1
Query: 524 KKKQTKRNH--VSKRAGKKPGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKP 581
KKK+ KR H K++ KK SK++K++ Q+S + S + D++S S
Sbjct: 104209 KKKKGKRKHKKSEKKSKKKSKKSKKKKSK-----QESSSSSSSSSSEDSSDESSSSSSSS 104045
Query: 582 LKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLKSHTEEYTSKTQMESASNSEMSKR 641
E + ++ + + + G K +S S ++ + K + + S +E SK+
Sbjct: 104044 SSDSEDESEEEDVWLEKTADGIKKPKKKKSS-----TSKKDKKSKKKKKKRKSEAEKSKK 103880
Query: 642 SVWEESGPSRFKNYEMPGSSNSEMG 666
S S S+ KN E ++ ++G
Sbjct: 103879 S--SSSSASKSKNKESASHNDEDVG 103811
>emb|AL445883.3|CNS07EEQ Human chromosome 14 DNA sequence BAC R-908D14 of library RPCI-11 from
chromosome 14 of Homo sapiens (Human), complete sequence
Length = 169496
Score = 39.3 bits (90), Expect = 1.9
Identities = 41/154 (26%), Positives = 65/154 (41%), Gaps = 2/154 (1%)
Frame = +3
Query: 514 ENNSPVVYPNKKKQ-TKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHD 572
+ P YP++ +Q T + VS + G+ S R+ P KSL +
Sbjct: 8514 QQQEPGRYPSRSQQSTPKTTVSSKTGR----SLRKINSAPPTETKSLRI----------- 8648
Query: 573 DTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNV-MTSPNVHLKSHTEEYTSKTQME 631
SRS R ++AD + L+ R +RG K NN SPN + +K+ +
Sbjct: 8649 -ASRSTRHSHGPLQADVFVELLSPRRKRRGRKSANNTPENSPNF---PNFRVIATKSSEQ 8816
Query: 632 SASNSEMSKRSVWEESGPSRFKNYEMPGSSNSEM 665
S S + SK S+ E R + + PG S++
Sbjct: 8817 SRSVNIASKLSLQESESKRRCRKRQSPGMKKSKL 8918
>emb|AL355885.4|CNS05TCW Human chromosome 14 DNA sequence BAC R-434O22 of library RPCI-11 from
chromosome 14 of Homo sapiens (Human), complete sequence
Length = 174442
Score = 39.3 bits (90), Expect = 1.9
Identities = 41/154 (26%), Positives = 65/154 (41%), Gaps = 2/154 (1%)
Frame = -1
Query: 514 ENNSPVVYPNKKKQ-TKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHD 572
+ P YP++ +Q T + VS + G+ S R+ P KSL +
Sbjct: 73666 QQQEPGRYPSRSQQSTPKTTVSSKTGR----SLRKINSAPPTETKSLRI----------- 73532
Query: 573 DTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNV-MTSPNVHLKSHTEEYTSKTQME 631
SRS R ++AD + L+ R +RG K NN SPN + +K+ +
Sbjct: 73531 -ASRSTRHSHGPLQADVFVELLSPRRKRRGRKSANNTPENSPNF---PNFRVIATKSSEQ 73364
Query: 632 SASNSEMSKRSVWEESGPSRFKNYEMPGSSNSEM 665
S S + SK S+ E R + + PG S++
Sbjct: 73363 SRSVNIASKLSLQESESKRRCRKRQSPGMKKSKL 73262
>emb|AL033534.1|SPBC215 S.pombe chromosome II cosmid c215
Length = 37777
Score = 38.9 bits (89), Expect = 2.4
Identities = 69/394 (17%), Positives = 130/394 (32%), Gaps = 9/394 (2%)
Frame = +3
Query: 290 PSKDRHLSAHKPSPENTALLQGKKSREKSHSLSAMT----FARNTQSDKAHPIEEAQLSV 345
PS S PS ++A+L S E S S S+++ +T S + +Q SV
Sbjct: 32364 PSSTESSSLLDPSSVSSAILPSSTSVEVSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSV 32543
Query: 346 EENPATTCTD----ELENDCRSPENKMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRK 401
++T + + S + + S ++ + + T S S P +
Sbjct: 32544 SSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSS 32723
Query: 402 GQSSWENSNVSNTGQDTLQINSKRNMKDCEEVRNEPNPKKQKPALENKRKTNSTQTXXXX 461
SS +S+ S+T + +S + + +P + + ++S+ T
Sbjct: 32724 TSSSLSSSSSSSTASSSSSSSSIISSSSS----SSSSPTSTSSTISSSSSSSSSPTSTSS 32891
Query: 462 XXXXXXXXXXXXXXVPKKVTLTXXXXXXXXXXXXEWWRVKSDESSVDRNPSKENNSPVVY 521
TL+ S SS +PS + S
Sbjct: 32892 TISSSSSSSSSFSS-----TLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTS 33056
Query: 522 PNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKP 581
+K + + VS + +S T S + + ++S H +S S+
Sbjct: 33057 SSKSSSSFSSTVSSSSS----TSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKSS- 33221
Query: 582 LKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLKSHT-EEYTSKTQMESASNSEMSK 640
S P Y N+ + + H SH+ +SK + ++S+S ++
Sbjct: 33222 ---------------SAPVSSAFYHNSTSSRSSSHSSSHSLSSLSSKPILTASSSSLLTS 33356
Query: 641 RSVWEESGPSRFKNYEMPGSSNSEMGDEQDQKSL 674
S E E S +S + Q S+
Sbjct: 33357 SSHTYERSTVYVVTVETVSSGSSTYASQSTQTSI 33458
>emb|X16421.1|EFPF54 E.faecium DNA encoding P54 protein
Length = 1900
Score = 38.9 bits (89), Expect = 2.4
Identities = 30/133 (22%), Positives = 60/133 (44%), Gaps = 5/133 (3%)
Frame = +3
Query: 312 KKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEEN--PATTCTDE---LENDCRSPEN 366
K++RE++ + +A T A ++ S AQ S EE+ P ++ T+E E+ + +
Sbjct: 1056 KEAREQAAAQAAQTQALSSASTTTESSSAAQSSSEESKAPESSTTEESTSTESSTTTENS 1235
Query: 367 KMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQINSKRN 426
S + ++ E T +S + S P E ++ N+N +N+ ++ ++ N
Sbjct: 1236 STGSSSTESSSTEESTVPESSTQESTPANTESSSSSSNTNVNNNTNNSTNNSTNNSTTNN 1415
Query: 427 MKDCEEVRNEPNP 439
+ V P P
Sbjct: 1416 NNNNNTVTPAPTP 1454
>gb|AY058638.1| Drosophila melanogaster LD33732 full length cDNA
Length = 1954
Score = 38.9 bits (89), Expect = 2.4
Identities = 82/440 (18%), Positives = 157/440 (35%), Gaps = 10/440 (2%)
Frame = +1
Query: 355 DELENDCRSPENKMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNT 414
D E D S E + +S+ + ++ K ++R K K R S E +N +
Sbjct: 73 DSDEEDDSSEEERRESKNVR-----KKAKKDKKKRDKKLKKKSRARASSSDSERTNSPSR 237
Query: 415 GQDTLQINSKRNMKDCEEVRNEPNPKKQKPALENKRKTNSTQTXXXXXXXXXXXXXXXXX 474
K N D ++ P EN ++ S +
Sbjct: 238 ---------KENKSDRSRGAKASKSDEKAPQQENVMRSRSRERKDTRSSRPLEASIDSRQ 390
Query: 475 XVPKK---VTLTXXXXXXXXXXXXEWWRVKSDESSVDRNPSKENNSPVVYPNKKKQTKRN 531
P++ T + R K S DR S+E + ++ +R+
Sbjct: 391 RKPRERSAATPPRKEPERHRERSKDRQRSKEKHRSRDRLRSRERQ-------RSRERQRS 549
Query: 532 HVSKRAGKKPGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQ 591
+R+ ++ S +RQ++ R ++ K+ + S D R + KP + + +
Sbjct: 550 RERQRSKERQRSKERQRSIERQRSKERQRSKERQRSRS--KDALRCKEKP----QCNEKE 711
Query: 592 KSLAISRPKRGCKYRNNVMTSPNVHLKS---HTEEYTSKTQMESASN----SEMSKRSVW 644
+S R K + R+ P +S + T +++ SN S+ +RS
Sbjct: 712 RSRERRRSKSKDRQRSKEKHRPKDEQQSVDKRRDRSTDRSKENQRSNERQRSKERQRSKE 891
Query: 645 EESGPSRFKNYEMPGSSNSEMGDEQDQKSLHFTTRSFNMVPDKKLHHKLVLPSNSPNVRR 704
E R ++ E S ++ +D++ L RS +++ K PS R
Sbjct: 892 RERSKDRQRSRERRRSKEGQLS--KDRQGLKERQRS-----NERKRSKERQPSKEKQRSR 1050
Query: 705 SNRIRLKPLEYWRGERVDYQESSSGQLVLEIISPSSVPTKIKAQRNLGKVNKKVTKKPTH 764
+ +PL+ D Q S Q E + + PT+ +R+ + + + PT+
Sbjct: 1051ERQRSREPLQ-----SKDRQRSKERQRSRERPAKEARPTRSPRERSSKSRDDRRHRSPTN 1215
Query: 765 LNSHEKAKMELPLDMRLGDP 784
+ +K +L + R P
Sbjct: 1216ASRKQKDDTKLSRNARFKSP 1275
>ref|NM_005626.1| Homo sapiens splicing factor, arginine/serine-rich 4 (SFRS4), mRNA
Length = 2076
Score = 38.5 bits (88), Expect = 3.2
Identities = 50/193 (25%), Positives = 75/193 (37%), Gaps = 11/193 (5%)
Frame = +3
Query: 499 RVKSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKS 558
R KS S R+ SK+ S P+K K R+H AGK SK Q E ++Q +
Sbjct: 732 RSKSRSRSQSRSRSKKEKSRS--PSKDKSRSRSH---SAGKSRSKSKDQAEE---KIQNN 887
Query: 559 LNV-KDSGGTVSGHDDTSRS----------QRKPLKIIEADPTQKSLAISRPKRGCKYRN 607
NV K + S H S+S + K + + +KSL SR + K +
Sbjct: 888 DNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVEQGQEQEKSLRQSRSRSRSKAGS 1067
Query: 608 NVMTSPNVHLKSHTEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGSSNSEMGD 667
+ K ++ S+ + S S RS E S K GSS + +
Sbjct: 1068RSRSRSRSKSK---DKRKSRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKE 1238
Query: 668 EQDQKSLHFTTRS 680
+ D+ +RS
Sbjct: 1239DTDRSQSRSPSRS 1277
>ref|XM_068308.1| Homo sapiens similar to nuclear protein (LOC133373), mRNA
Length = 1719
Score = 38.5 bits (88), Expect = 3.2
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 3/155 (1%)
Frame = +3
Query: 306 TALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQ---LSVEENPATTCTDELENDCR 362
TA Q + +R+ + + T QS +A E A+ S ++P +T EN+
Sbjct: 1065 TAATQRRVTRQDNEATRETTQETGQQSARADTSEGAR*LKYSHTQDPQSTTPQ*NENNST 1244
Query: 363 SPENKMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQIN 422
+ +T K P + +T++ RR + K N G +
Sbjct: 1245 NKRTGTNPQTEK-PKHNKESTREKTRRQQRAK------------------NQGSEHRSRT 1367
Query: 423 SKRNMKDCEEVRNEPNPKKQKPALENKRKTNSTQT 457
++R +D + + + PK++ P N++KTN T+T
Sbjct: 1368 TERCTEDKRKQKEQHRPKERDPQPTNRKKTNETKT 1472
>gb|L14076.1|HUMSRP75A Human pre-mRNA splicing factor SRp75 mRNA, complete cds
Length = 2076
Score = 38.5 bits (88), Expect = 3.2
Identities = 50/193 (25%), Positives = 75/193 (37%), Gaps = 11/193 (5%)
Frame = +3
Query: 499 RVKSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKS 558
R KS S R+ SK+ S P+K K R+H AGK SK Q E ++Q +
Sbjct: 732 RSKSRSRSQSRSRSKKEKSRS--PSKDKSRSRSH---SAGKSRSKSKDQAEE---KIQNN 887
Query: 559 LNV-KDSGGTVSGHDDTSRS----------QRKPLKIIEADPTQKSLAISRPKRGCKYRN 607
NV K + S H S+S + K + + +KSL SR + K +
Sbjct: 888 DNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVEQGQEQEKSLRQSRSRSRSKAGS 1067
Query: 608 NVMTSPNVHLKSHTEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGSSNSEMGD 667
+ K ++ S+ + S S RS E S K GSS + +
Sbjct: 1068RSRSRSRSKSK---DKRKSRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKE 1238
Query: 668 EQDQKSLHFTTRS 680
+ D+ +RS
Sbjct: 1239DTDRSQSRSPSRS 1277
>gb|AE003750.1|AE003750 Drosophila melanogaster genomic scaffold 142000013386035 section 75 of
105, complete sequence
Length = 227398
Score = 38.1 bits (87), Expect = 4.1
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 4/144 (2%)
Frame = +1
Query: 303 PENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELENDCR 362
PEN ALL+ K+ K H + +S ++ P E +E+ ++ LEN
Sbjct: 76291 PENLALLEKKRLPRKPHLPENLALLEKRRSSRSPPPLENLALLEKRRSSRSPPPLEN--- 76461
Query: 363 SPENKMQSETAKTPPAWE----RTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDT 418
K + ++++PP E + TK+S R+ P+ K SS + N
Sbjct: 76462 -LAVKAKRRSSRSPPPLENLAVKETKKSLRKALLPENQSVKAKRMSSRPPLQLPNPTSKA 76638
Query: 419 LQINSKRNMKDCEEVRNEPNPKKQ 442
+ + ++ R PNP++Q
Sbjct: 76639 SRNLRQPQKYQQKKSRTSPNPQRQ 76710
>gb|AC005135.1|AC005135 Drosophila melanogaster DNA sequence (P1 DS07070 (D331)), complete
sequence
Length = 67297
Score = 38.1 bits (87), Expect = 4.1
Identities = 78/456 (17%), Positives = 138/456 (30%), Gaps = 13/456 (2%)
Frame = -3
Query: 139 TLQKAASPAGQKRVASVSRSPVDRQASNKNISFKTRKRLNFEDKVTS--STAETENSVLQ 196
T KA + A + +P Q + + + K+ L K T+ STAET+ S
Sbjct: 44426 TTPKATTIKSTATTARATEAPKTEQTTLRTTTIKSTSELITTLKTTTIKSTAETKKSTHN 44247
Query: 197 VEDNLSKGQEGTSSEITQKRDDLSSDVQSRSKKNFSELFLETXXXXXXXXXXXXHTAAVP 256
S T T+K + + +K+ +E + A
Sbjct: 44246 PTTKKSTTLRTTEEPTTRKSSTAKTTREPTTKRETTERTTQEPSTSKTTTHETTAEPATK 44067
Query: 257 FSPPPPSDMKLLEDEXXXXXXXXXXXXXLWVMIPSKDRHLSAHKPSPENTALLQGKKSRE 316
+ P+ K P+ R + +T S+
Sbjct: 44066 KTTHEPTTQKSTTLRITEEPTTRKSSTAKTTREPTTKRETTERTTKEPST-------SKT 43908
Query: 317 KSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELENDCRSPENKMQSETAKTP 376
+H +A + T + + L + E P TT R P K ++
Sbjct: 43907 TTHETTAEPATKKTTHEPTTQ-KSTTLRITEEP-TTRKSSTARTTREPTTKRETT----- 43749
Query: 377 PAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQINSKRNMKDCEEVRNE 436
ERTT++ SK K E + + + TL+I + + +
Sbjct: 43748 ---ERTTQEPS--TSKTKTHETTAEPATKKTTHEPTTQKSTTLRITEEPTTRKSSTAKTT 43584
Query: 437 PNPKKQKPALENKRKTNSTQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXXXXXXXXXE 496
P ++ E K ST K T E
Sbjct: 43583 REPTTKRETTERTTKEPSTS---------------------KTTTHETTAEPATKKTTHE 43467
Query: 497 WWRVKSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKR---------- 546
KS + P+ +S ++ T + ++R ++P +SK
Sbjct: 43466 PTTQKSTTLRITEEPTTRKSSTA--RTTREPTTKRETTERTTQEPSTSKTTTHETTAEPA 43293
Query: 547 -QKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKP 581
+KT P QKS ++ + + T+R+ R+P
Sbjct: 43292 TKKTTHEPTTQKSTTLRITEEPTTRKSSTARTTREP 43185
>ref|NG_000284.1| Drosophila melanogaster string of pearls (sop) on chromosome 2
Length = 10001
Score = 38.1 bits (87), Expect = 4.1
Identities = 78/456 (17%), Positives = 138/456 (30%), Gaps = 13/456 (2%)
Frame = +2
Query: 139 TLQKAASPAGQKRVASVSRSPVDRQASNKNISFKTRKRLNFEDKVTS--STAETENSVLQ 196
T KA + A + +P Q + + + K+ L K T+ STAET+ S
Sbjct: 575 TTPKATTIKSTATTARATEAPKTEQTTLRTTTIKSTSELITTLKTTTIKSTAETKKSTHN 754
Query: 197 VEDNLSKGQEGTSSEITQKRDDLSSDVQSRSKKNFSELFLETXXXXXXXXXXXXHTAAVP 256
S T T+K + + +K+ +E + A
Sbjct: 755 PTTKKSTTLRTTEEPTTRKSSTAKTTREPTTKRETTERTTQEPSTSKTTTHETTAEPATK 934
Query: 257 FSPPPPSDMKLLEDEXXXXXXXXXXXXXLWVMIPSKDRHLSAHKPSPENTALLQGKKSRE 316
+ P+ K P+ R + +T S+
Sbjct: 935 KTTHEPTTQKSTTLRITEEPTTRKSSTAKTTREPTTKRETTERTTKEPST-------SKT 1093
Query: 317 KSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELENDCRSPENKMQSETAKTP 376
+H +A + T + + L + E P TT R P K ++
Sbjct: 1094TTHETTAEPATKKTTHEPTTQ-KSTTLRITEEP-TTRKSSTARTTREPTTKRETT----- 1252
Query: 377 PAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDTLQINSKRNMKDCEEVRNE 436
ERTT++ SK K E + + + TL+I + + +
Sbjct: 1253---ERTTQEPS--TSKTKTHETTAEPATKKTTHEPTTQKSTTLRITEEPTTRKSSTAKTT 1417
Query: 437 PNPKKQKPALENKRKTNSTQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXXXXXXXXXE 496
P ++ E K ST K T E
Sbjct: 1418REPTTKRETTERTTKEPSTS---------------------KTTTHETTAEPATKKTTHE 1534
Query: 497 WWRVKSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKR---------- 546
KS + P+ +S ++ T + ++R ++P +SK
Sbjct: 1535PTTQKSTTLRITEEPTTRKSSTA--RTTREPTTKRETTERTTQEPSTSKTTTHETTAEPA 1708
Query: 547 -QKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKP 581
+KT P QKS ++ + + T+R+ R+P
Sbjct: 1709TKKTTHEPTTQKSTTLRITEEPTTRKSSTARTTREP 1816
>gb|M94316.1|RABDNAB Rabbit neurofilament-H mRNA, partial cds
Length = 1533
Score = 38.1 bits (87), Expect = 4.1
Identities = 67/338 (19%), Positives = 117/338 (33%), Gaps = 20/338 (5%)
Frame = +1
Query: 330 TQSDKAHPIEEAQLSVEENPATTCTDELENDCRSPENKMQSETAKTP-----PAWERTTK 384
T+ A P EEA+ V+E + + + +SP E AK+P PA ++
Sbjct: 127 TEGGAASPEEEAKSPVKEEAKSPAEAKSPAEAKSPAEAKSPEKAKSPAEVKSPAEAKSPA 306
Query: 385 Q--SQRRVSKPKAAEELRKGQSS-------WENSNVSNTGQDTLQINSKRNMKDCEEVRN 435
+ S + P A+ K +S E + + +++ S K E+ ++
Sbjct: 307 EAKSPEKAKSPAEAKSPEKAKSPEKAKSPVKEEAKSPEKAKSPVEVKSPAEAKSPEKAKS 486
Query: 436 EPNPKKQKPA-LENKRKTNSTQTXXXXXXXXXXXXXXXXXXVPKKVTLTXXXXXXXXXXX 494
+ + PA ++ K S + P+K
Sbjct: 487 PVKEEAKSPAEAKSPEKAKSPEKEEAKSPEKAKSPEKEEAKSPEKAKSPVEVKSPAEAKS 666
Query: 495 XEWWRVKSDESSVDRNPSKENNSPVVYPNK-----KKQTKRNHVSKRAGKKPGSSKRQKT 549
E + KS ++P K SPV K K K K K P +K
Sbjct: 667 PE--KAKSPVKEEAKSPEKA-KSPVKEEAKSPEKAKSPEKAKSPVKEEAKSPEKAKSPVK 837
Query: 550 EMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNV 609
E + +K+ + + + V + + P+K EA +K+ + + K K
Sbjct: 838 EEAKSPEKAKSPEKAKSPVKEEAKSPEKAKSPVK-EEAKSPEKAKSPEKAKSPVK---EE 1005
Query: 610 MTSPNVHLKSHTEEYTSKTQMESASNSEMSKRSVWEES 647
SP K+ + E E A + E +K V EE+
Sbjct: 1006AKSPE---KAKSPEKAKSPVKEEAKSPEKAKSPVKEEA 1110
>emb|AL163912.1|ATT2I1 Arabidopsis thaliana DNA chromosome 5, BAC clone T2I1 (ESSA project)
Length = 116763
Score = 38.1 bits (87), Expect = 4.1
Identities = 58/265 (21%), Positives = 90/265 (33%), Gaps = 2/265 (0%)
Frame = -2
Query: 501 KSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSLN 560
K S + SK + P P K +K + + KP S K+ P + +
Sbjct: 108554 KPSTKSTSKPSSKSTSKPSTKPKSKPSSKP---TSKPSSKPISKPSTKSTSKPSSKPTSK 108384
Query: 561 VKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHL--K 618
+ TS+ KP PT KS A K K N + P K
Sbjct: 108383 PSTVSASKPSSKPTSKPSTKPTVKPTPKPTSKSTANPSTKPITKPINKPTSKPRTKTIAK 108204
Query: 619 SHTEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGSSNSEMGDEQDQKSLHFTT 678
++E T + + S SK S S PS + +++ ++ K + T
Sbjct: 108203 PSSKEAG*PTTKPTTTKST-SKPSSKPSSKPSTKPTSKSVVKPSTKPTNKPVTKPISKPT 108027
Query: 679 RSFNMVPDKKLHHKLVLPSNSPNVRRSNRIRLKPLEYWRGERVDYQESSSGQLVLEIISP 738
P K K P+ P + S++ KP+ + S S + + P
Sbjct: 108026 TKSIAKPSSKEAGK---PTTRPTIEPSSKPTTKPVAKPISKSTTKPISKS--VAKPVRKP 107862
Query: 739 SSVPTKIKAQRNLGKVNKKVTKKPT 763
+S PTK + K K KPT
Sbjct: 107861 TSKPTKKSEAKPTSKTTVKPVAKPT 107787
>gb|AC007853.4|AC007853 Drosophila melanogaster, chromosome 3R, region 96B-96C, BAC clone
BACR03L02, complete sequence
Length = 162921
Score = 38.1 bits (87), Expect = 4.1
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 4/144 (2%)
Frame = +2
Query: 303 PENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELENDCR 362
PEN ALL+ K+ K H + +S ++ P E +E+ ++ LEN
Sbjct: 53771 PENLALLEKKRLPRKPHLPENLALLEKRRSSRSPPPLENLALLEKRRSSRSPPPLEN--- 53941
Query: 363 SPENKMQSETAKTPPAWE----RTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDT 418
K + ++++PP E + TK+S R+ P+ K SS + N
Sbjct: 53942 -LAVKAKRRSSRSPPPLENLAVKETKKSLRKALLPENQSVKAKRMSSRPPLQLPNPTSKA 54118
Query: 419 LQINSKRNMKDCEEVRNEPNPKKQ 442
+ + ++ R PNP++Q
Sbjct: 54119 SRNLRQPQKYQQKKSRTSPNPQRQ 54190
>gb|AC008206.10|AC008206 Drosophila melanogaster, chromosome 3R, region 96B-96B, BAC clone
BACR03I15, complete sequence
Length = 181132
Score = 38.1 bits (87), Expect = 4.1
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 4/144 (2%)
Frame = +1
Query: 303 PENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELENDCR 362
PEN ALL+ K+ K H + +S ++ P E +E+ ++ LEN
Sbjct: 117103 PENLALLEKKRLPRKPHLPENLALLEKRRSSRSPPPLENLALLEKRRSSRSPPPLEN--- 117273
Query: 363 SPENKMQSETAKTPPAWE----RTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQDT 418
K + ++++PP E + TK+S R+ P+ K SS + N
Sbjct: 117274 -LAVKAKRRSSRSPPPLENLAVKETKKSLRKALLPENQSVKAKRMSSRPPLQLPNPTSKA 117450
Query: 419 LQINSKRNMKDCEEVRNEPNPKKQ 442
+ + ++ R PNP++Q
Sbjct: 117451 SRNLRQPQKYQQKKSRTSPNPQRQ 117522
>gb|AC009744.7| Drosophila melanogaster, chromosome 2L, region 30F-30F, BAC clone
BACR06G16, complete sequence
Length = 179218
Score = 38.1 bits (87), Expect = 4.1
Identities = 69/381 (18%), Positives = 132/381 (34%), Gaps = 30/381 (7%)
Frame = +2
Query: 297 SAHKPSPENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDE 356
+ H+P+ + + L K + E + ++ T + K E + P+T+ T
Sbjct: 169532 TTHEPTTKKSTTL--KPTEEPTTRKTSTTKTTREPTTKRETTERTT----QEPSTSKTTT 169693
Query: 357 LENDCRSPENKMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSNVSNTGQ 416
E K E R T++ R K A+ R+ + E + +
Sbjct: 169694 HETTAEPATKKTTHEPTTQKSTTLRITEEPTTR--KSSTAKTTREPTTKRETTERTTKEP 169867
Query: 417 DTLQINSKRNMKD--CEEVRNEPNPKKQ---KPALE-NKRKTNSTQTXXXXXXXXXXXXX 470
T + + + ++ ++ +EP KK KP E RKT++T+T
Sbjct: 169868 TTRKTTTHKTTEEPTTKKTTHEPTTKKSTTLKPTEEPTTRKTSTTKTTREPTTKRKTTER 170047
Query: 471 XXXXXVPKKVTL--TXXXXXXXXXXXXEWWRVKSDESSVDRNPSKENNSPVVYPNK--KK 526
+K T T + + + S P++E + K ++
Sbjct: 170048 TTKEPTTRKTTTHKTTEEPTTNKTTTKKTTHEPTTKKSTTLKPTEEPTTRKTSTTKTTRE 170227
Query: 527 QTKRNHVSKRAGKKPGSSKR-----------QKTEMSPRVQKSLNVKDSGGTVSGHDDTS 575
T + ++R ++P +SK +KT P QKS ++ + + T+
Sbjct: 170228 PTTKRVTTERTTREPTTSKTTTHETTAEPATKKTTHEPTTQKSTTLRITEEPTTRKSSTA 170407
Query: 576 RSQRKPLKIIEA------DPTQKSLAISRPKR---GCKYRNNVMTSPNVHLKSHTEEYTS 626
++ R+P E +PT + + K + T + LK E T
Sbjct: 170408 KTTREPTTKRETTERTTKEPTTRKTTTHKTTEEPTTKKTTHEPTTKKSTTLKPTEEPTTR 170587
Query: 627 KTQMESASNSEMSKRSVWEES 647
KT + +KR E +
Sbjct: 170588 KTSTTKTTREPTTKRKTTERT 170650
>dbj|AB021506.1|AB021506 Human herpesvirus 6 DNA, variant B, complete genome, strain:HST
Length = 161573
Score = 37.7 bits (86), Expect = 5.4
Identities = 39/192 (20%), Positives = 73/192 (37%), Gaps = 3/192 (1%)
Frame = -1
Query: 504 ESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSLNVKD 563
++ + N + ++ +K R +SK A + P K P+ +K
Sbjct: 130481 KTKIHSNSELHHTKKNIHRSKTSLQDRVLISKHAPRAPTKDNSYKKHHDPKDTNDPKMKH 130302
Query: 564 SGGTVSGHDDTSRSQ--RKPLKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLKSHT 621
S G + +T+ S + +++ + + K+ + K S N+H K+
Sbjct: 130301 SRGRTTSKKNTANSNGHQDVREVVVKNVSGKAAKNTSKKSD--------PSHNLHGKTSD 130146
Query: 622 EEYTSKTQMESASNSEMSK-RSVWEESGPSRFKNYEMPGSSNSEMGDEQDQKSLHFTTRS 680
E+Y + E S SK +S S Y+ P +S S G+ K T++
Sbjct: 130145 EQYKTSPDNEKISTPPKSKTHHCIHDSSSSEEGQYKSPNNSESNYGNCLSDKFYDNFTKT 129966
Query: 681 FNMVPDKKLHHK 692
P+ K +HK
Sbjct: 129965 ---TPNSKTNHK 129939
>emb|AJ331485.1|HSA331485 Homo sapiens genomic sequence surrounding NotI site, clone
NR1-XE20RS
Length = 875
Score = 37.7 bits (86), Expect = 5.4
Identities = 46/230 (20%), Positives = 87/230 (37%), Gaps = 2/230 (0%)
Frame = -1
Query: 362 RSPENKMQSETAKTPPAWERTTKQSQRRVSKP--KAAEELRKGQSSWENSNVSNTGQDTL 419
++ + + + KT ++T KQ++++ +K K ++ K Q + + + T Q
Sbjct: 755 KTHKTNXKKKKKKTNNTNKKTKKQTKKKNNKKXTKKXKKNXKKQKTQKQTTKKQTHQHKK 576
Query: 420 QINSKRNMKDCEEVRNEPNPKKQKPALENKRKTNSTQTXXXXXXXXXXXXXXXXXXVPKK 479
+ K N ++ +N+ KKQK K+KT + PKK
Sbjct: 575 K--XKXNKXKTKKNQNKTKQKKQKHTTNKKKKTKHKK-----------------KKPPKK 453
Query: 480 VTLTXXXXXXXXXXXXEWWRVKSDESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGK 539
T T + K+ + ++ K KKK+TK+N+ +K+ K
Sbjct: 452 KTNTKNNHXK---------KKKTPKKKQNKKNKKXKKKTKXKTKKKKKTKKNNKNKKQNK 300
Query: 540 KPGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQRKPLKIIEADP 589
+ K +K + + +K K+ T + K K A P
Sbjct: 299 XKKNXKTKKKQKKKK-KKPTKXKNKQKTXXXKTKKKKKXXKKXKXXTAPP 153
>gb|AE003449.1|AE003449 Drosophila melanogaster genomic scaffold 142000013386054 section 33 of
35, complete sequence
Length = 299786
Score = 37.7 bits (86), Expect = 5.4
Identities = 48/233 (20%), Positives = 86/233 (36%), Gaps = 12/233 (5%)
Frame = +1
Query: 42 EDQSKASFLDDFTE--SLTSSTQKKKANYSQSSSKKCPESHSKPVPVSSRTGEA-SLQXX 98
E S + LD E SL + T KK + + + E S P+SS TG++ +
Sbjct: 87559 ESSSSTADLDIVAEEASLGAETDKKSTS-ENDNGESSTEISSSEAPISSTTGQSEDVSST 87735
Query: 99 XXXXXXXXXXVQANEVHHGASD---------ELDLCVGSPVVLLDANVNTLQKAASPAGQ 149
A++ + G+SD E+ SPV L + + T +K A
Sbjct: 87736 TETNSEAIEKEIASDSNDGSSDDPASSTEFIEITNTTSSPVSLQEDSSTTTEKLTRRA-F 87912
Query: 150 KRVASVSRSPVDRQASNKNISFKTRKRLNFEDKVTSSTAETENSVLQVEDNLSKGQEGTS 209
R +S + + V + ++ R+R+ ++++++ AE+E E ++
Sbjct: 87913 NRFSSTTPAVVPEDETTSTVN--QRRRVIVRNRISTTEAESEAQTTTEEPKRRSFYRTST 88086
Query: 210 SEITQKRDDLSSDVQSRSKKNFSELFLETXXXXXXXXXXXXHTAAVPFSPPPP 262
+ + SD Q ++ F T T P SP P
Sbjct: 88087 TAEPSSSTEADSDAQISTETTTRRSFFRTRTTEAASS-----TTEEPSSPTEP 88230
>gb|U92288.1|HHU92288 Human herpesvirus 6 serotype B putative major immediate-early genes
Length = 30752
Score = 37.7 bits (86), Expect = 5.4
Identities = 39/192 (20%), Positives = 73/192 (37%), Gaps = 3/192 (1%)
Frame = -1
Query: 504 ESSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSLNVKD 563
++ + N + ++ +K R +SK A + P K P+ +K
Sbjct: 17999 KTKIHSNSELHHTKKNIHRSKTSLQDRVLISKHAPRAPTKDNSYKKHHDPKDTNDPKMKH 17820
Query: 564 SGGTVSGHDDTSRSQ--RKPLKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLKSHT 621
S G + +T+ S + +++ + + K+ + K S N+H K+
Sbjct: 17819 SRGRTTSKKNTANSNGHQDVREVVVKNVSGKAAKNTSKKSD--------PSHNLHGKTSD 17664
Query: 622 EEYTSKTQMESASNSEMSK-RSVWEESGPSRFKNYEMPGSSNSEMGDEQDQKSLHFTTRS 680
E+Y + E S SK +S S Y+ P +S S G+ K T++
Sbjct: 17663 EQYKTSPDNEKISTPPKSKTHHCIHDSSSSEEGQYKSPNNSESNYGNCLSDKFYDNFTKT 17484
Query: 681 FNMVPDKKLHHK 692
P+ K +HK
Sbjct: 17483 ---TPNSKTNHK 17457
>ref|NM_058959.1| Caenorhabditis elegans
Length = 2598
Score = 37.7 bits (86), Expect = 5.4
Identities = 39/141 (27%), Positives = 57/141 (39%), Gaps = 8/141 (5%)
Frame = +1
Query: 505 SSVDRNPSKENNSPVVYPNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSLNVKDS 564
SS D +PS N SPV +KKQ KKP K+++ E S V ++ + D
Sbjct: 574 SSADSSPSVRNRSPVPVEKEKKQ-----------KKPRGGKKKEAEASTSVPQA-SSPDI 717
Query: 565 GGTVSGHDDTSRSQRKPLKIIE-ADPTQKSLAISRPKRGCKYRNNVMTSPN-------VH 616
TS S++ K E +DP + + K+ Y+ N S + V
Sbjct: 718 SSQEQPESSTSSSKKPSKKEKEPSDPMSTFVLDNWKKKKRDYKLNSSDSSDDDLEPAIVP 897
Query: 617 LKSHTEEYTSKTQMESASNSE 637
LK T K S +NS+
Sbjct: 898 LKKRALSSTRKPSTSSVANSQ 960
>gb|AC023732.3| Drosophila melanogaster X BAC RP98-42M11 (Roswell Park Cancer Institute
Drosophila BAC Library) complete sequence
Length = 177818
Score = 37.7 bits (86), Expect = 5.4
Identities = 48/233 (20%), Positives = 86/233 (36%), Gaps = 12/233 (5%)
Frame = +3
Query: 42 EDQSKASFLDDFTE--SLTSSTQKKKANYSQSSSKKCPESHSKPVPVSSRTGEA-SLQXX 98
E S + LD E SL + T KK + + + E S P+SS TG++ +
Sbjct: 169995 ESSSSTADLDIVAEEASLGAETDKKSTS-ENDNGESSTEISSSEAPISSTTGQSEDVSST 170171
Query: 99 XXXXXXXXXXVQANEVHHGASD---------ELDLCVGSPVVLLDANVNTLQKAASPAGQ 149
A++ + G+SD E+ SPV L + + T +K A
Sbjct: 170172 TETNSEAIEKEIASDSNDGSSDDPASSTEFIEITNTTSSPVSLQEDSSTTTEKLTRRA-F 170348
Query: 150 KRVASVSRSPVDRQASNKNISFKTRKRLNFEDKVTSSTAETENSVLQVEDNLSKGQEGTS 209
R +S + + V + ++ R+R+ ++++++ AE+E E ++
Sbjct: 170349 NRFSSTTPAVVPEDETTSTVN--QRRRVIVRNRISTTEAESEAQTTTEEPKRRSFYRTST 170522
Query: 210 SEITQKRDDLSSDVQSRSKKNFSELFLETXXXXXXXXXXXXHTAAVPFSPPPP 262
+ + SD Q ++ F T T P SP P
Sbjct: 170523 TAEPSSSTEADSDAQISTETTTRRSFFRTRTTEAASS-----TTEEPSSPTEP 170666
>ref|NM_058843.1| Caenorhabditis elegans
Length = 2601
Score = 37.7 bits (86), Expect = 5.4
Identities = 18/41 (43%), Positives = 27/41 (64%), Gaps = 1/41 (2%)
Frame = +1
Query: 687 KKLHHKLVLPSNSPN-VRRSNRIRLKPLEYWRGERVDYQES 726
K H+L+ P ++P+ VRRS R+R+KP+ W GE+ Y S
Sbjct: 2257 KLKEHQLMKPEDAPDGVRRSTRVRVKPVRSWLGEQPVYVNS 2379
>gb|AF230482.1|AF230482 Hydra vulgaris tight junction protein ZO-1 (ZO-1) mRNA, complete
cds
Length = 5888
Score = 37.7 bits (86), Expect = 5.4
Identities = 52/265 (19%), Positives = 95/265 (35%), Gaps = 5/265 (1%)
Frame = +2
Query: 293 DRHLSAHKPSPENTALLQGKKSREKSHSLSAMTFARNTQSDKAHPIEEAQLSVEENPATT 352
DR +H+ +N +G EKSH + N + +K+H ++ E+ T
Sbjct: 686 DRSERSHRSRSKNREDSEGGDKSEKSHRSRSKNREDNAEGEKSH---RSRSKNREDAETG 856
Query: 353 CTDELENDCRSPENKMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKG-QSSWENSNV 411
E + RS +N+ +ET E++ K + R + AE K +S +N
Sbjct: 857 EKSEKSHRSRS-KNREDAETG------EKSEKSHRSRSRNREDAETGEKSHRSRSKNRED 1015
Query: 412 SNTGQDTLQINSKRN---MKDCEEVRNEPNPKKQ-KPALENKRKTNSTQTXXXXXXXXXX 467
T + +L+ SK K E ++E PK Q K +L K NS +
Sbjct: 1016PETEEKSLRSKSKTREDLSKTTESEKSEKIPKSQSKASLGGMEKENSDRQKSKTREDAGE 1195
Query: 468 XXXXXXXXVPKKVTLTXXXXXXXXXXXXEWWRVKSDESSVDRNPSKENNSPVVYPNKKKQ 527
K + + + D V++ S+ K
Sbjct: 1196EEKARIMSTQSKPNIIESSDKHRSRS-----KTREDTEGVEKPRSRSTQRKPNDMEKLNS 1360
Query: 528 TKRNHVSKRAGKKPGSSKRQKTEMS 552
++ N ++A + S R + +++
Sbjct: 1361SRANEDGEKASSRSRSKSRSRDDLT 1435
>gb|AF321299.1|AF321299 Caenorhabditis elegans CENP-C-like protein HCP-4 mRNA, complete cds
Length = 2728
Score = 37.7 bits (86), Expect = 5.4
Identities = 18/41 (43%), Positives = 27/41 (64%), Gaps = 1/41 (2%)
Frame = +3
Query: 687 KKLHHKLVLPSNSPN-VRRSNRIRLKPLEYWRGERVDYQES 726
K H+L+ P ++P+ VRRS R+R+KP+ W GE+ Y S
Sbjct: 2280 KLKEHQLMKPEDAPDGVRRSTRVRVKPVRSWLGEQPVYVNS 2402
>gb|AC013453.1|AC013453 Arabidopsis thaliana chromosome I BAC T16N11 genomic sequence, complete
sequence
Length = 91001
Score = 37.7 bits (86), Expect = 5.4
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +3
Query: 702 VRRSNRIRLKPLEYWRGERVDY 723
VRRS RI+ +PLEYWRGER Y
Sbjct: 88140 VRRSTRIKSRPLEYWRGERFLY 88205
>gb|AC023705.3| Drosophila melanogaster X BAC RP98-7L6 (Roswell Park Cancer Institute
Drosophila BAC Library) complete sequence
Length = 184784
Score = 37.7 bits (86), Expect = 5.4
Identities = 48/233 (20%), Positives = 86/233 (36%), Gaps = 12/233 (5%)
Frame = -3
Query: 42 EDQSKASFLDDFTE--SLTSSTQKKKANYSQSSSKKCPESHSKPVPVSSRTGEA-SLQXX 98
E S + LD E SL + T KK + + + E S P+SS TG++ +
Sbjct: 134757 ESSSSTADLDIVAEEASLGAETDKKSTS-ENDNGESSTEISSSEAPISSTTGQSEDVSST 134581
Query: 99 XXXXXXXXXXVQANEVHHGASD---------ELDLCVGSPVVLLDANVNTLQKAASPAGQ 149
A++ + G+SD E+ SPV L + + T +K A
Sbjct: 134580 TETNSEAIEKEIASDSNDGSSDDPASSTEFIEITNTTSSPVSLQEDSSTTTEKLTRRA-F 134404
Query: 150 KRVASVSRSPVDRQASNKNISFKTRKRLNFEDKVTSSTAETENSVLQVEDNLSKGQEGTS 209
R +S + + V + ++ R+R+ ++++++ AE+E E ++
Sbjct: 134403 NRFSSTTPAVVPEDETTSTVN--QRRRVIVRNRISTTEAESEAQTTTEEPKRRSFYRTST 134230
Query: 210 SEITQKRDDLSSDVQSRSKKNFSELFLETXXXXXXXXXXXXHTAAVPFSPPPP 262
+ + SD Q ++ F T T P SP P
Sbjct: 134229 TAEPSSSTEADSDAQISTETTTRRSFFRTRTTEAASS-----TTEEPSSPTEP 134086
>emb|AL445565.1|MPULM03 Mycoplasma pulmonis (strain UAB CTIP) complete genome; segment 3/3
Length = 315079
Score = 37.7 bits (86), Expect = 5.4
Identities = 37/174 (21%), Positives = 64/174 (36%), Gaps = 2/174 (1%)
Frame = -2
Query: 502 SDESSVDRNPSKENNSPVVYPN--KKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSL 559
S ESS NP+ ENN + + N + +K + S K QK ++ +
Sbjct: 194556 SKESSPQINPNLENNQEISHSNNGENDDSKEQNTSNSRQTKNDLRSEQKQNLTTK----- 194392
Query: 560 NVKDSGGTVSGHDDTSRSQRKPLKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLKS 619
N + V ++T ++ K E D + K ++ +N T+ V K+
Sbjct: 194391 NPSSNSSNVETKNETQNNENSSTKKDEIDTSAK----TQDSTNSNLKNEEKTN-QVETKT 194227
Query: 620 HTEEYTSKTQMESASNSEMSKRSVWEESGPSRFKNYEMPGSSNSEMGDEQDQKS 673
+TE S + + NS K + + N N + E+ KS
Sbjct: 194226 NTESNNSNSTNKQEENSSTKKEEISKSESNVNNSNSTNKQEENIDNKKEEISKS 194065
>gb|AC005617.2|AC005617 Arabidopsis thaliana chromosome II section 129 of 255 of the complete
sequence. Sequence from clones T30L20, T20K9
Length = 35822
Score = 37.4 bits (85), Expect = 7.0
Identities = 50/254 (19%), Positives = 89/254 (34%), Gaps = 5/254 (1%)
Frame = -2
Query: 147 AGQKRVASVSRSPVDRQASNKNISF----KTRKRLNFEDKVTSSTAETENSVLQVEDNL- 201
A +K +S D++ SF K ++ E + +SS +TE + +DN
Sbjct: 29491 AKEKVESSSQEKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEE 29312
Query: 202 SKGQEGTSSEITQKRDDLSSDVQSRSKKNFSELFLETXXXXXXXXXXXXHTAAVPFSPPP 261
S QE T + +K + + Q SK+N +E + + P
Sbjct: 29311 SSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAP 29132
Query: 262 PSDMKLLEDEXXXXXXXXXXXXXLWVMIPSKDRHLSAHKPSPENTALLQGKKSREKSHSL 321
+ K E+E +K++ S+ S EN
Sbjct: 29131 QEETKEKENEKIEKEESASQEETKEKETETKEKEESSSNESQENV--------------- 28997
Query: 322 SAMTFARNTQSDKAHPIEEAQLSVEENPATTCTDELENDCRSPENKMQSETAKTPPAWER 381
NT+S+K +EE + +E+ T EN E K ET++ E
Sbjct: 28996 -------NTESEKKEQVEENEKKTDED---TSESSKENSVSDTEQKQSEETSEK----EE 28859
Query: 382 TTKQSQRRVSKPKA 395
+ K + V++ ++
Sbjct: 28858 SNKNGETEVTQEQS 28817
>dbj|AP000751.4|AP000751 Homo sapiens genomic DNA, chromosome 11q, clone:RP11-679A11, complete
sequence
Length = 176713
Score = 37.4 bits (85), Expect = 7.0
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -3
Query: 759 TKKPTHLNSHEKAKMELPLDMRLGDPFQATLAKDPETAEL--VPMDLIRPRDTYRFFVEQ 816
T PTH N+ E + +D+ P QA L+ DPE A + VP+D + D F +Q
Sbjct: 28097 TGDPTHSNTTESGEQHHQVDLTGNQPHQAYLSGDPEKARITSVPLDSEKSDDHVSFPEDQ 27918
Query: 817 HGLKVFKTL 825
G T+
Sbjct: 27917 SGKNSMPTV 27891
>gb|AF397467.1|AF397467 Ictalurus punctatus novel immune-type receptor 2 (NITR2) and novel
immune-type receptor 4 (NITR4) genes, complete cds
Length = 10115
Score = 37.4 bits (85), Expect = 7.0
Identities = 34/188 (18%), Positives = 70/188 (37%)
Frame = +2
Query: 45 SKASFLDDFTESLTSSTQKKKANYSQSSSKKCPESHSKPVPVSSRTGEASLQXXXXXXXX 104
S +S + S++SS+ ++ + SSS+ +HS SS + +S
Sbjct: 6272 SSSSNSSSSSSSISSSSSSSSSSSNSSSSRSSSSNHSSSSSSSSSSNSSSTSSSSSSNSS 6451
Query: 105 XXXXVQANEVHHGASDELDLCVGSPVVLLDANVNTLQKAASPAGQKRVASVSRSPVDRQA 164
++ +S S +++ ++ ++S + S S S +
Sbjct: 6452 SSSSTSSSSTSSSSSS------NSSSSSSNSSSSSSSSSSSNSSSSSSNSSSSSSSSSSS 6613
Query: 165 SNKNISFKTRKRLNFEDKVTSSTAETENSVLQVEDNLSKGQEGTSSEITQKRDDLSSDVQ 224
++ + S + N TSS++ + +S + S TSS + SS+
Sbjct: 6614 NSSSSSSSSSSSSNSSSSSTSSSSTSSSSSSNSSSSSSNSSSSTSSSSSSNSSSSSSNSS 6793
Query: 225 SRSKKNFS 232
S S + S
Sbjct: 6794 SSSSSSSS 6817
>ref|NM_014715.1| Homo sapiens KIAA0712 gene product (KIAA0712), mRNA
Length = 6476
Score = 37.4 bits (85), Expect = 7.0
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 759 TKKPTHLNSHEKAKMELPLDMRLGDPFQATLAKDPETAEL--VPMDLIRPRDTYRFFVEQ 816
T PTH N+ E + +D+ P QA L+ DPE A + VP+D + D F +Q
Sbjct: 2631 TGDPTHSNTTESGEQHHQVDLTGNQPHQAYLSGDPEKARITSVPLDSEKSDDHVSFPEDQ 2810
Query: 817 HGLKVFKTL 825
G T+
Sbjct: 2811 SGKNSMPTV 2837
>dbj|AB018255.1|AB018255 Homo sapiens mRNA for KIAA0712 protein, complete cds
Length = 6476
Score = 37.4 bits (85), Expect = 7.0
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 759 TKKPTHLNSHEKAKMELPLDMRLGDPFQATLAKDPETAEL--VPMDLIRPRDTYRFFVEQ 816
T PTH N+ E + +D+ P QA L+ DPE A + VP+D + D F +Q
Sbjct: 2631 TGDPTHSNTTESGEQHHQVDLTGNQPHQAYLSGDPEKARITSVPLDSEKSDDHVSFPEDQ 2810
Query: 817 HGLKVFKTL 825
G T+
Sbjct: 2811 SGKNSMPTV 2837
>gb|AC091387.2| Drosophila melanogaster, chromosome 2R, region 50C-50D, BAC clone
BACR13P15, complete sequence
Length = 171222
Score = 37.0 bits (84), Expect = 9.2
Identities = 24/101 (23%), Positives = 48/101 (46%), Gaps = 3/101 (2%)
Frame = -3
Query: 353 CTDELENDCRSPEN--KMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSN 410
C +E + CR E K + E K E ++ ++ + K K AEE +K +
Sbjct: 149680 CENEQQKKCREQERRKKCEEEEKKKKCEEEEIKEKCEQELQKLKCAEEAKKRKCEKLKKK 149501
Query: 411 VSNTGQDTLQINSK-RNMKDCEEVRNEPNPKKQKPALENKR 450
+ + + ++NSK +++KD EE + + ++++ E R
Sbjct: 149500 LESLKNEEKELNSKLKDLKDKEERLKKADEEEKRKKCEEDR 149378
>emb|AJ271723.1|FRU271723 Fugu rubripes Furu-I103, psmb8, psmb10, psmb9-l, psmb9 and abcb3b genes
Length = 22398
Score = 37.0 bits (84), Expect = 9.2
Identities = 37/188 (19%), Positives = 69/188 (36%)
Frame = -3
Query: 45 SKASFLDDFTESLTSSTQKKKANYSQSSSKKCPESHSKPVPVSSRTGEASLQXXXXXXXX 104
S +S + S +SS+ +++ S SSS + S S SSR+ +S
Sbjct: 16024 SSSSSSSSSSRSSSSSSSSSRSSSSSSSSSRSSSSSSSSSSSSSRSSSSSSSSSSSSSSR 15845
Query: 105 XXXXVQANEVHHGASDELDLCVGSPVVLLDANVNTLQKAASPAGQKRVASVSRSPVDRQA 164
+ +S S + ++ ++S + +S S S R +
Sbjct: 15844 SSSSSSSRSSSSSSSS------SSSSSSSGRSSSSSSSSSSSSSSSSRSSSSSSSSSRSS 15683
Query: 165 SNKNISFKTRKRLNFEDKVTSSTAETENSVLQVEDNLSKGQEGTSSEITQKRDDLSSDVQ 224
S+ + S + R + +SS++ + +S + S G SS + SS
Sbjct: 15682 SSSSSSSSSSSRSSSSSSSSSSSSSSRSSSSSSSSSSSSSSSGRSSSSSSSSSRSSSSSS 15503
Query: 225 SRSKKNFS 232
S S + S
Sbjct: 15502 SSSSSSSS 15479
>gb|AF157706.1|AF157706 Human herpesvirus 6B strain Z29, complete genome
Length = 162114
Score = 37.0 bits (84), Expect = 9.2
Identities = 38/175 (21%), Positives = 66/175 (37%), Gaps = 2/175 (1%)
Frame = -1
Query: 520 VYPNKKKQTKRNHVSKRAGKKPGSSKRQKTEMSPRVQKSLNVKDSGGTVSGHDDTSRSQ- 578
++ +K R +SK A + P K P+ +K S G + +T+ S
Sbjct: 130617 IHRSKTSLQDRVLISKHAPRAPTKDNSYKKHHDPKDTNDPKMKHSRGRTTSKKNTANSNG 130438
Query: 579 RKPLKIIEADPTQKSLAISRPKRGCKYRNNVMTSPNVHLKSHTEEYTSKTQMESASNSEM 638
+ ++ + A + K+ S N+H K+ E+Y + E S
Sbjct: 130437 HQDVREVAVKNVSGKAAKNTSKKSDP-------SHNLHGKTSDEQYKTSPDNEKISTPPK 130279
Query: 639 SK-RSVWEESGPSRFKNYEMPGSSNSEMGDEQDQKSLHFTTRSFNMVPDKKLHHK 692
SK +S S Y+ P +S S G+ K T++ P+ K +HK
Sbjct: 130278 SKTHHCIHDSSSSEEGQYKSPNNSESNYGNCLSDKFYDNFTKT---TPNSKTNHK 130123
>gb|AC007329.7|AC007329 Drosophila melanogaster, chromosome 2R, region 50B-50C, BAC clone
BACR14P04, complete sequence
Length = 126140
Score = 37.0 bits (84), Expect = 9.2
Identities = 24/101 (23%), Positives = 48/101 (46%), Gaps = 3/101 (2%)
Frame = +3
Query: 353 CTDELENDCRSPEN--KMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSN 410
C +E + CR E K + E K E ++ ++ + K K AEE +K +
Sbjct: 113496 CENEQQKKCREQERRKKCEEEEKKKKCEEEEIKEKCEQELQKLKCAEEAKKRKCEKLKKK 113675
Query: 411 VSNTGQDTLQINSK-RNMKDCEEVRNEPNPKKQKPALENKR 450
+ + + ++NSK +++KD EE + + ++++ E R
Sbjct: 113676 LESLKNEEKELNSKLKDLKDKEERLKKADEEEKRKKCEEDR 113798
>emb|AL355931.1|NCB3E4 Neurospora crassa DNA linkage group II BAC clone B3E4
Length = 62421
Score = 37.0 bits (84), Expect = 9.2
Identities = 19/75 (25%), Positives = 40/75 (53%)
Frame = +1
Query: 814 VEQHGLKVFKTLDTIYFSTGKLVLGPYEEKGKQHVGQDILVFYVNFGDLLCTLHETPYKL 873
V+ + KT++ +F G + L P K ++ + + F+V G +L T++ET +++
Sbjct: 8707 VKDAAFRYAKTVNEGFFGAGVVDLPPGAVKRPKNSRKMFMTFFVYTGRVLVTVNETVFRI 8886
Query: 874 TTGDSFYVPSGNHYN 888
G ++VP G ++
Sbjct: 8887 GKGGMWFVPRGMFFS 8931
>gb|AE003817.2|AE003817 Drosophila melanogaster genomic scaffold 142000013386047 section 26 of
52, complete sequence
Length = 262257
Score = 37.0 bits (84), Expect = 9.2
Identities = 24/101 (23%), Positives = 48/101 (46%), Gaps = 3/101 (2%)
Frame = +1
Query: 353 CTDELENDCRSPEN--KMQSETAKTPPAWERTTKQSQRRVSKPKAAEELRKGQSSWENSN 410
C +E + CR E K + E K E ++ ++ + K K AEE +K +
Sbjct: 73414 CENEQQKKCREQERRKKCEEEEKKKKCEEEEIKEKCEQELQKLKCAEEAKKRKCEKLKKK 73593
Query: 411 VSNTGQDTLQINSK-RNMKDCEEVRNEPNPKKQKPALENKR 450
+ + + ++NSK +++KD EE + + ++++ E R
Sbjct: 73594 LESLKNEEKELNSKLKDLKDKEERLKKADEEEKRKKCEEDR 73716
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 19, 2002 12:00 AM
Number of letters in database: 587,334,133
Number of sequences in database: 1,164,257
Lambda K H
0.308 0.124 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,541,702,456
Number of Sequences: 1164257
Number of extensions: 62069027
Number of successful extensions: 290634
Number of sequences better than 10.0: 184
Number of HSP's better than 10.0 without gapping: 48464
Number of HSP's successfully gapped in prelim test: 15053
Number of HSP's that attempted gapping in prelim test: 191941
Number of HSP's gapped (non-prelim): 164470
length of query: 906
length of database: 1,627,433,809
effective HSP length: 145
effective length of query: 761
effective length of database: 1,458,616,544
effective search space: 1110007189984
effective search space used: 1110007189984
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 84 (37.0 bits)