TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(386 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,164,257 sequences; 587,334,133 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_008264.1| Mus musculus homeo box A13 (Hoxa13), mRNA 488 e-136
ref|XM_004921.1| Homo sapiens homeo box A13 (HOXA13), mRNA 481 e-134
ref|NM_000522.1| Homo sapiens homeo box A13 (HOXA13), mRNA 476 e-132
gb|AY030050.1| Gallus gallus homeo box A13 (HOXA13) mRNA, c... 332 3e-89
gb|U59322.1|MMU59322 Mus musculus transcription factor HOXA... 330 1e-88
gb|AC004080.2| Homo sapiens chromosome 7 clone RP1-170O19, ... 323 2e-86
gb|U82827.1|HSU82827 Human transcription factor HOXA13 (HOX... 318 4e-85
gb|AC107365.2| Danio rerio, clone -241I7, complete sequence 236 2e-60
gb|AF255676.1|AF255676 Homo sapiens homeoprotein C13 (HOXC1... 228 5e-58
ref|NM_017410.1| Homo sapiens homeo box C13 (HOXC13), mRNA 228 5e-58
gb|AF193796.1|AF193796 Mus musculus homeodomain protein (Ho... 228 5e-58
ref|XM_006804.4| Homo sapiens homeo box C13 (HOXC13), mRNA 228 5e-58
gb|AF263466.2|AF263466 Homo sapiens HOXC13 (HOXC13) mRNA, c... 228 5e-58
gb|BC002754.1|BC002754 Homo sapiens, homeo box C13, clone M... 228 5e-58
dbj|AK024027.1|AK024027 Homo sapiens cDNA FLJ13965 fis, clo... 228 9e-58
ref|NM_008267.1| Mus musculus homeo box B13 (Hoxb13), mRNA 220 2e-55
gb|U57051.1|MMU57051 Mus musculus Hoxb-13 mRNA, complete cds 220 2e-55
gb|BC013639.1|BC013639 Mus musculus, homeo box B13, clone M... 220 2e-55
gb|BC007092.1|BC007092 Homo sapiens, homeo box B13, clone M... 216 2e-54
gb|U57052.1|HSU57052 Human Hoxb-13 mRNA, complete cds 216 2e-54
ref|XM_030437.1| Homo sapiens homeo box B13 (HOXB13), mRNA 216 2e-54
gb|U81599.1|HSU81599 Homo sapiens homeodomain protein HOXB1... 214 8e-54
ref|NM_006361.2| Homo sapiens homeo box B13 (HOXB13), mRNA 214 8e-54
ref|NM_000523.1| Homo sapiens homeo box D13 (HOXD13), mRNA 209 3e-52
gb|L09550.1|CHKHOXD13A Chicken homeobox protein hoxd13 mRNA... 209 3e-52
gb|U20942.1|AMU20942 Ambystoma mexicanum homeobox protein H... 209 4e-52
ref|NM_008275.1| Mus musculus homeo box D13 (Hoxd13), mRNA 207 1e-51
emb|X99291.1|MMHOXD13 M.musculus hoxd-13 gene 207 1e-51
gb|AF298184.1|AF298184 Ambystoma mexicanum homeodomain prot... 190 2e-46
emb|X87752.1|DRHOXD13G D.rerio Hoxd-13 gene 162 4e-38
emb|AJ314743.1|XLA314743 Xenopus laevis partial mRNA for ho... 148 7e-34
gb|AC021667.21|AC021667 Mus musculus, clone RP23-304J12, co... 137 2e-30
gb|AC107364.1| Danio rerio, clone -10O19, complete sequence 136 3e-30
gb|AC012531.11|AC012531 Homo sapiens, clone RP11-83K1, comp... 131 9e-29
gb|AF071242.1|AF071242 Danio rerio homeobox protein (hoxa13... 131 1e-28
gb|AF224263.1|AF224263 Heterodontus francisci Evx2 (evx2), ... 130 3e-28
gb|AF071241.1|AF071241 Danio rerio homeobox protein (hoxa13... 128 8e-28
gb|AC015584.18| Mus musculus, clone RP23-400H17, complete s... 128 1e-27
gb|L35012.1|MUSHOXAE Mus musculus (clone cos2W3H) Hox gene ... 127 2e-27
gb|AF005220.1|HUMTFHOXD2 Homo sapiens transcription factor ... 127 2e-27
dbj|AB038155.1|AB038155 Homo sapiens mRNA for NUP98-HOXD13 ... 127 2e-27
gb|AC009336.13|AC009336 Homo sapiens chromosome 2, clone RP... 127 2e-27
dbj|AB032481.1|AB032481 Homo sapiens HOXD13 gene for homeob... 127 2e-27
gb|AC091179.5| Homo sapiens chromosome 17, clone CTD-2377D2... 125 5e-27
dbj|D10290.1|CHKCHOX4G Gallus gallus Chox-4g gene for homeo... 125 6e-27
gb|S80553.1|S80553 HOX-4 complex: Hox-4.8=homeobox gene [mi... 124 2e-26
emb|AJ335159.1|HSA335159 Homo sapiens genomic sequence surr... 120 2e-25
gb|AF071261.1|AF071261 Danio rerio homeobox protein (hoxc13... 119 5e-25
emb|Y07699.1|DRHOXA13 D.rerio HOXA-13 gene, partial 117 2e-24
gb|AF071262.1|AF071262 Danio rerio homeobox protein (hoxc13... 112 7e-23
emb|AJ335615.1|HSA335615 Homo sapiens genomic sequence surr... 106 3e-21
gb|BC016712.1|BC016712 Homo sapiens, clone IMAGE:4108342, mRNA 103 3e-20
emb|AJ324355.1|HSA324355 Homo sapiens genomic sequence surr... 96 7e-18
gb|AF005219.1|HUMTFHOXD1 Homo sapiens transcription factor ... 91 1e-16
emb|AJ335415.1|HSA335415 Homo sapiens genomic sequence surr... 91 1e-16
ref|NM_014212.1| Homo sapiens homeo box C11 (HOXC11), mRNA 86 4e-15
emb|AJ000041.1|HSHOXC11P Homo sapiens mRNA for HOXC11 86 4e-15
gb|BC001543.1|BC001543 Homo sapiens, homeo box C11, clone M... 86 4e-15
ref|XM_012215.3| Homo sapiens homeo box C11 (HOXC11), mRNA 86 4e-15
gb|M81249.1|CHKHOXA Gallus gallus homeodomain-containing pr... 86 7e-15
gb|AF151672.1|AF151672 Nereis virens Post1 homeobox protein... 84 2e-14
emb|X99679.1|HSHOXC13 H.sapiens mRNA for HOXC13 protein 84 3e-14
gb|M81250.1|CHKHOXB Gallus gallus homeodomain-containing pr... 83 4e-14
ref|NM_021192.1| Homo sapiens homeo box D11 (HOXD11), mRNA 83 4e-14
emb|AJ319668.1|XLA319668 Xenopus laevis partial mRNA for ho... 83 5e-14
gb|AF031481.1|AF031481 Ambystoma mexicanum homeobox transcr... 83 5e-14
ref|NM_008273.1| Mus musculus homeo box D11 (Hoxd11), mRNA 82 6e-14
emb|X57674.1|NVNVHBOX2 N.viridescens RNA for homeobox gene ... 82 6e-14
ref|NM_005523.3| Homo sapiens homeo box A11 (HOXA11), mRNA 82 6e-14
dbj|D10288.1|CHKCHOX4E Gallus gallus Chox-4e gene for homeo... 82 1e-13
emb|X60395.1|MMHOX46 M.musculus Hox-4.6 gene 82 1e-13
emb|X71422.1|MMHOXD11 M.musculus Hoxd-11 gene 82 1e-13
emb|X60762.1|MMHOX46E2 M.musculus Hox-4.6 gene, exon 2 82 1e-13
gb|AF154915.1|AF154915 Homo sapiens transcription factor HO... 82 1e-13
gb|U20370.1|MMU20370 Mus musculus homeobox protein (Hoxa11)... 81 2e-13
ref|NM_010450.1| Mus musculus homeo box A11 (Hoxa11), mRNA 81 2e-13
gb|AF071164.1|AF071164 Homo sapiens homeobox A11 (HOXA11) g... 80 2e-13
gb|AF039307.1|AF039307 Homo sapiens homeobox A11 (HOXA11) g... 80 2e-13
gb|AF287137.1|AF287137 Danio rerio Hoxa-11b gene, complete cds 80 3e-13
gb|AF287136.1|AF287136 Danio aequipinnatus Hoxa-11b gene, c... 80 3e-13
emb|X58849.1|MMHOX47 Murine Hox-4.7 gene 80 3e-13
gb|AF144679.1|AF144679 Lingula anatina Post-1 homeodomain p... 80 4e-13
gb|AF287138.1|AF287138 Danio rerio Hoxa-11a gene, complete cds 80 4e-13
gb|AF042652.1|AF042652 Strongylocentrotus purpuratus homeod... 80 4e-13
ref|NM_008274.1| Mus musculus homeo box D12 (Hoxd12), mRNA 80 4e-13
gb|U20371.1|MMU20371 Mus musculus homeobox protein (Hoxa11)... 80 4e-13
gb|BC015565.1|BC015565 Homo sapiens, homeo box B9, clone MG... 79 5e-13
gb|L35011.1|MUSHOXAD Mus musculus (clone cos2W3E) Hox gene ... 79 5e-13
gb|AF328962.1|AF328963S2 Homo sapiens HOXC12 gene, exon 2 a... 79 5e-13
ref|NM_024017.1| Homo sapiens homeo box B9 (HOXB9), mRNA 79 5e-13
emb|X83451.1|CIHBOX5 C.intestinalis DNA for homeobox (435 bp) 79 5e-13
emb|X62019.1|GGGHOX G.gallus Ghox 4.7 mRNA 79 7e-13
gb|L35010.1|MUSHOXAC Mus musculus (clone cos2W3A) Hox gene ... 79 7e-13
gb|AF276815.1|AF276815 Branchiostoma floridae homeodomain-c... 79 7e-13
ref|XM_087004.1| Homo sapiens similar to homeo box D12 (LOC... 79 7e-13
emb|X87751.1|DRHOXD11G D.rerio Hoxd-11 gene 79 7e-13
ref|XM_010803.1| Homo sapiens homeo box D12 (HOXD12), mRNA 79 7e-13
dbj|D10289.1|CHKCHOX4F Gallus gallus Chox-4f gene for homeo... 79 7e-13
gb|AF071260.1|AF071260 Danio rerio homeobox protein (hoxc12... 79 9e-13
gb|M34857.1|MUSHOX25A Mouse Hox-2.5 mRNA 79 9e-13
ref|XM_028620.2| Homo sapiens homeo box C9 (HOXC9), mRNA 79 9e-13
dbj|AK056414.1|AK056414 Homo sapiens cDNA FLJ31852 fis, clo... 79 9e-13
dbj|AK000445.1|AK000445 Homo sapiens cDNA FLJ20438 fis, clo... 79 9e-13
dbj|AB026968.1|AB026968 Oryzias latipes gene for HOXD9B, pa... 78 1e-12
dbj|AK056123.1|AK056123 Homo sapiens cDNA FLJ31561 fis, clo... 78 1e-12
gb|AF071258.1|AF071258 Danio rerio homeobox protein (hoxc11... 78 2e-12
gb|AY014296.1|AY014295S2 Homo sapiens HOXB9 gene, exon 2 an... 77 2e-12
gb|S66855.1|S66855 HoxB9=Hox-2.5 [mice, embryos, mRNA Parti... 77 2e-12
emb|X16172.1|HSHOX25 Human HOX-2.5 gene for homeodomain pro... 77 2e-12
dbj|AK012173.1|AK012173 Mus musculus 10 days embryo whole b... 77 2e-12
gb|AF071259.1|AF071259 Danio rerio homeobox protein (hoxc11... 77 2e-12
ref|NM_008272.1| Mus musculus homeo box C9 (Hoxc9), mRNA 77 2e-12
emb|X55318.1|MMHOX32A Mus musculus Hox-3.2 gene 77 2e-12
emb|X07647.1|MMHOX32 Mouse mRNA for Hox 3.2 protein 77 2e-12
gb|AC011194.15|AC011194 Mus musculus chromosome 11, clone R... 77 2e-12
gb|M35603.1|MUSHOXMAA Mouse Hox-3.1 gene and Hox-3.2-Hox-3.... 77 2e-12
gb|U61980.1|OAU61980 Ovis aries Hoxc-9 mRNA, partial cds 77 2e-12
gb|AC009789.21|AC009789 Homo sapiens chromosome 17, clone R... 77 2e-12
gb|AY014302.1|AY014301S2 Homo sapiens HOXC9 gene, exon 2 an... 77 2e-12
emb|Y07698.1|DRHOXA11 D.rerio HOXA-11 gene, partial 77 2e-12
gb|S76303.1|S76303 Hox-C|Hox-3 {clone 27b} [rats, Sprague-D... 77 2e-12
gb|U31564.1|HEU31564 Heliocidaris erythrogramma HEHBOX7 (He... 77 3e-12
gb|AF071240.1|AF071240 Danio rerio homeobox protein (hoxa11... 77 3e-12
emb|Z35150.1|BFHOX10G B.floridae Hox-10 gene for homeobox p... 77 3e-12
ref|NM_021193.1| Homo sapiens homeo box D12 (HOXD12), mRNA 77 3e-12
gb|AF071250.1|AF071250 Danio rerio homeobox protein (hoxb10... 77 3e-12
ref|XM_028621.1| Homo sapiens homeo box C10 (HOXC10), mRNA 77 3e-12
gb|U05571.1|SCU05571 Styela clava Ascidian homeobox protein... 77 3e-12
gb|BC001293.1|BC001293 Homo sapiens, homeo box C10, clone M... 77 3e-12
gb|AF071267.1|AF071267 Danio rerio homeobox protein (hoxc9a... 77 3e-12
gb|AF255675.1|AF255675 Homo sapiens homeoprotein C10 (HOXC1... 77 3e-12
ref|NM_017409.1| Homo sapiens homeo box C10 (HOXC10), mRNA 77 3e-12
gb|AF075754.2|AF075754 Holothuria glaberrima homeodomain-co... 77 3e-12
emb|X63507.1|MMHOX35 M.musculus HOX-3.5 gene 77 3e-12
gb|U05600.1|SPU05600 Styela plicata Ascidian homeobox prote... 77 3e-12
gb|S73920.1|S73920 Styela clava DNA binding protein AHox2 (... 77 3e-12
gb|S73921.1|S73921 AHox3 [Styela plicata, Genomic, 180 nt] 77 3e-12
gb|BC019150.1|BC019150 Mus musculus, homeo box D9, clone MG... 76 5e-12
ref|XM_011611.3| Homo sapiens homeo box A10 (HOXA10), mRNA 76 5e-12
gb|BC007600.1|BC007600 Homo sapiens, clone IMAGE:3347294, mRNA 76 5e-12
gb|AF453292.1|AF453292 Sus scrofa homeobox A11 mRNA, partia... 76 5e-12
gb|AF071256.1|AF071256 Danio rerio homeobox protein (hoxb9a... 76 5e-12
gb|BC013971.1|BC013971 Homo sapiens, clone MGC:12859 IMAGE:... 76 5e-12
ref|NM_013555.1| Mus musculus homeo box D9 (Hoxd9), mRNA 76 5e-12
dbj|D11330.1|MUSHOX36C Mouse Hox 3.6 gene 76 5e-12
gb|U92572.1|FRU92572 Fugu rubripes homeobox protein HOXC-9 ... 76 5e-12
dbj|AB026969.1|AB026969 Oryzias latipes mRNA for HOXB9A, pa... 76 5e-12
gb|AY052760.1| Euprymna scolopes posterior-1 homeodomain pr... 76 6e-12
dbj|AB026970.1|AB026970 Oryzias latipes mRNA for HOXC9A, co... 76 6e-12
dbj|AB049973.1|AB049973 Dugesia japonica mRNA for Hox class... 75 8e-12
ref|NM_002148.1| Homo sapiens homeo box D10 (HOXD10), mRNA 75 8e-12
emb|X59373.1|HSHOX4D Human HOX4D mRNA for a homeobox protein 75 8e-12
gb|BC013463.1|BC013463 Mus musculus, clone MGC:18685 IMAGE:... 75 8e-12
gb|U51413.1|RPU51413 Rasbora paviei Hoxd10 gene, exon 2, pa... 75 8e-12
gb|U51422.1|RHU51422 Rasbora heteromorpha Hoxd10 gene, exon... 75 8e-12
gb|U51412.1|DPU51412 Danio pulcher Hoxd10 gene, exon 2, par... 75 8e-12
gb|U51411.1|DKU51411 Danio kerri Hoxd10 gene, exon 2, parti... 75 8e-12
emb|X87753.1|DRHOXD12G D.rerio Hoxd-12 gene 75 8e-12
emb|X68976.1|NVHOXD N.viridescens mRNA for Hoxd-10 75 8e-12
gb|U31600.1|HEU31600 Heliocidaris erythrogramma HEHBOX10 (H... 75 8e-12
dbj|D10287.1|CHKCHOX4D Gallus gallus Chox-4d gene for homeo... 75 8e-12
gb|AF298186.1|AF298186 Ambystoma mexicanum homeodomain prot... 75 1e-11
gb|AF151673.1|AF151673 Nereis virens Post2 homeobox protein... 75 1e-11
gb|AF224262.1|AF224262 Heterodontus francisci HoxA10 (HoxA1... 75 1e-11
emb|X68975.1|NVHOXC N.viridescens mRNA for Hoxc-10 75 1e-11
gb|AF298185.1|AF298185 Ambystoma mexicanum homeodomain prot... 75 1e-11
gb|AF031245.1|AF031245 Ambystoma mexicanum homeobox transcr... 75 1e-11
gb|AF144893.1|AF144893 Priapulus caudatus abdominal-B homeo... 75 1e-11
ref|NM_002142.1| Homo sapiens homeo box A9 (HOXA9), mRNA 75 1e-11
gb|U20941.1|AMU20941 Ambystoma mexicanum homeobox protein H... 75 1e-11
ref|NM_010456.1| Mus musculus homeo box A9 (Hoxa9), mRNA 75 1e-11
dbj|AB005457.1|AB005457 Mus musculus mRNA for Hoxa-9, compl... 75 1e-11
emb|X13537.1|CSHOX17B Guinea pig mRNA for Hox-1.7 protein (... 75 1e-11
gb|U41813.1|HSU41813 Human class I homeoprotein (HOXA9) mRN... 75 1e-11
gb|U92573.1|FRU92573 Fugu rubripes homeobox protein HOXA-9 ... 75 1e-11
gb|U81511.1|HSU81511 Homo sapiens HOXA-9A and HOXA-9B (HOXA... 75 1e-11
gb|AF071268.1|AF071268 Danio rerio homeobox protein (hoxd9a... 75 1e-11
emb|AJ319749.1|XLA319749 Xenopus laevis partial mRNA for ho... 75 1e-11
ref|XM_088184.1| Homo sapiens homeo box A9 (HOXA9), mRNA 75 1e-11
ref|XM_002545.1| Homo sapiens homeo box D9 (HOXD9), mRNA 75 1e-11
ref|NM_014213.1| Homo sapiens homeo box D9 (HOXD9), mRNA 75 1e-11
gb|AF071248.1|AF071248 Danio rerio homeobox protein (hoxa9a... 75 1e-11
emb|X59372.1|HSHOX4C Human HOX4C mRNA for a homeobox protein 75 1e-11
gb|M28449.1|MUSHOXA Mouse Hox-1.7 protein mRNA, 3' end 75 1e-11
emb|X97750.1|GGHOXA9 G.gallus mRNA for Hoxa-9 protein 75 1e-11
emb|X13536.1|CSHOX17A Guinea pig mRNA for Hox-1.7 protein (... 75 1e-11
gb|BC006537.1|BC006537 Homo sapiens, clone MGC:1934 IMAGE:2... 75 1e-11
gb|BC010023.1|BC010023 Homo sapiens, Similar to homeo box A... 75 1e-11
gb|AF010258.1|AF010258 Homo sapiens homeodomain protein (HO... 75 1e-11
emb|X61916.1|XBHBEX X.borealis homeobox gene, exon 75 1e-11
emb|X62669.1|MMHOX4 M.musculus genes HOX-4.4 and Hox-4.5 75 1e-11
emb|X15506.1|HSHOX52 Human Hox5.2 gene fragment 75 1e-11
gb|U82759.1|HSU82759 Human homeodomain protein HoxA9 mRNA, ... 74 2e-11
emb|X13147.1|TGHB4 Sea urchin HB4 gene for homeo domain pro... 74 2e-11
gb|U51421.1|DRU51421 Danio rerio Hoxd10 gene, exon 2, parti... 74 2e-11
gb|U51415.1|DPU51415 Devario pathirana Hoxd10 gene, exon 2,... 74 2e-11
gb|U51416.1|DMU51416 Devario malabaricus Hoxd10 gene, exon ... 74 2e-11
gb|U51409.1|DFU51409 Danio frankei Hoxd10 gene, exon 2, par... 74 2e-11
gb|U51420.1|DDU51420 Devario devario Hoxd10 gene, exon 2, p... 74 2e-11
gb|AF254953.1|AF254953 Tripneustes gratilla homeodomain pro... 74 2e-11
emb|Y16574.1|LSHOX9 Lineus sanguineus Hox-9 gene 74 2e-11
gb|AF089743.1|AF089743 Morone saxatilis homeodomain protein... 74 2e-11
gb|AF353624.1|AF353624 Gallus gallus caudal-type homeobox p... 74 2e-11
gb|U51423.1|REU51423 Rasbora elegans Hoxd10 gene, exon 2, p... 74 2e-11
gb|U51414.1|DCU51414 Devario cf. aequipinnatus Hoxd10 gene,... 74 2e-11
dbj|AB026972.1|AB026972 Oryzias latipes mRNA for HOXA9A, co... 74 2e-11
ref|NM_013554.1| Mus musculus homeo box D10 (Hoxd10), mRNA 74 2e-11
emb|X97819.1|TCZEN T.castaneum mRNA for Zen Tc 74 2e-11
emb|X14714.1|MMHOX52 Mus musculus Hox 5.2 gene for homeobox... 74 2e-11
gb|AY052761.1| Euprymna scolopes posterior-2 homeodomain pr... 74 3e-11
dbj|AK002670.1|AK002670 Mus musculus adult male kidney cDNA... 74 3e-11
gb|U35632.1|HSU35632 Human insulin promoter factor 1 (PDX-1... 74 3e-11
ref|NM_008263.1| Mus musculus homeo box A10 (Hoxa10), mRNA 74 3e-11
gb|L08757.1|MUSHOXAA Mus musculus homeobox protein (Hoxa10)... 74 3e-11
gb|AF281156.1|AF281156 Sus scrofa homeobox protein A10 mRNA... 74 3e-11
ref|XM_088187.1| Homo sapiens hypothetical gene LOC155287 (... 74 3e-11
gb|AF040714.1|AF040714 Homo sapiens homeobox protein A10 (H... 74 3e-11
gb|M30599.1|HUMHOXAC Human homeobox protein mRNA, partial c... 74 3e-11
emb|X58430.1|HSHOX18 Homo sapiens Hox1.8 gene for homeobox ... 74 3e-11
gb|AF227923.1|AF227923 Tribolium castaneum abdominal-B mRNA... 74 3e-11
ref|NM_018951.1| Homo sapiens homeo box A10 (HOXA10), mRNA 74 3e-11
ref|NM_000209.1| Homo sapiens insulin promoter factor 1, ho... 74 3e-11
emb|X99894.1|HSGSFGENE H.sapiens mRNA coding for insulin pr... 74 3e-11
emb|X14715.1|MMHOX53 Mus musculus Hox 5.3 gene for homeobox... 74 3e-11
dbj|AB049972.1|AB049972 Dugesia japonica mRNA for Hox class... 74 3e-11
gb|U30329.1|HSU30329 Human insulin promoter factor 1 (IPF1)... 74 3e-11
emb|X87750.1|DRHOXD10G D.rerio Hoxd-10 gene 74 3e-11
emb|X83450.1|CIHBOX4 C.intestinalis DNA for homeobox (214 bp) 73 4e-11
emb|AJ314827.1|XLA314827 Xenopus laevis partial mRNA for ho... 73 4e-11
gb|S61771.1|S61771 Hox-1 cluster: Hox-1.8 {homeobox} [mice,... 73 4e-11
emb|Z35149.1|BFHOX9G B.floridae Hox-9 gene for homeobox pro... 73 4e-11
gb|U51418.1|DAU51418 Danio aff. tweediei Hoxd10 gene, exon ... 73 4e-11
gb|U51417.1|DAU51417 Danio aff. albolineatus Hoxd10 gene, e... 73 4e-11
gb|U73854.1|MAU73854 Mesocricetus auratus homeodomain prote... 73 4e-11
dbj|D11331.1|MUSHOX18D Mouse Hox 1.8 gene 73 4e-11
emb|Y07697.1|DRHOXA10 D.rerio HOXA-10 gene exon 73 4e-11
emb|X62619.1|BMABDBHB B.mori Abd-B gene homeobox 73 4e-11
emb|AJ131397.1|CSA131397 Cupiennius salei mRNA for abdominal-B 73 5e-11
dbj|AB028838.1| Homo sapiens mRNA for homeobox protein GSH-... 73 5e-11
dbj|AB027048.1|AB027048 Oryzias latipes MF-Hox13-3 homeobox... 73 5e-11
gb|AF306344.1|AF306343S2 Homo sapiens homeobox protein 2 (G... 73 5e-11
ref|NM_013311.1| Homo sapiens insulin upstream factor 1 (IU... 72 7e-11
gb|AF049893.1|AF049893 Homo sapiens insulin upstream factor... 72 7e-11
dbj|AB026967.1|AB026967 Oryzias latipes mRNA for HOXD9A, co... 72 7e-11
gb|AF172090.1|AF172090 Caenorhabditis elegans homeodomain p... 72 7e-11
dbj|AB055742.1|AB055742 Oryzias latipes MF-hoxA13b gene, pa... 72 7e-11
ref|NM_067173.1| Caenorhabditis elegans 72 7e-11
emb|Z22638.1|HMHOXEXNA H.magnipapillata homeobox containing... 72 7e-11
gb|AF124593.1|AF124593 Cassiopea xamachana Scox-3 homeodoma... 72 7e-11
emb|AJ252182.1|HVU252182 Hydra vulgaris partial cnox-3 gene... 72 7e-11
dbj|AB026971.1|AB026971 Oryzias latipes mRNA for HOXA9B, co... 72 8e-11
gb|AF124594.1|AF124594 Cassiopea xamachana Scox-4 homeodoma... 72 1e-10
gb|AF172092.1|AF172092 Caenorhabditis elegans homeodomain p... 72 1e-10
dbj|D11329.1|MUSHOX35B Mouse Hox 3.5 mRNA 72 1e-10
ref|NM_067172.1| Homeobox domain 72 1e-10
gb|S79041.1|S79041 Gsh-2=dispersed homeobox gene [mice, NIH... 71 1e-10
emb|Y07696.1|DRHOXA9 D.rerio HOXA-9 gene exon 71 1e-10
gb|AF071249.1|AF071249 Danio rerio homeobox protein (hoxa9b... 71 1e-10
ref|NM_010451.1| Mus musculus homeo box A2 (Hoxa2), mRNA 71 2e-10
gb|M95599.1|MUSHOMEO Mus musculus homeobox-containing prote... 71 2e-10
emb|X69161.1|SGABDBG S.gregaria Abd-B gene 71 2e-10
gb|M93292.1|MUSHOX111B Mouse homeobox protein (Hox1.11) mRN... 71 2e-10
gb|U04838.1|MMU04838 Mus musculus C57BL/6J homeobox protein... 71 2e-10
ref|NM_012581.1| Rattus norvegicus homeobox A2 (Hoxa2), mRNA 71 2e-10
gb|M91802.1|RATHOX111A Rattus norvegicus homeobox protein (... 71 2e-10
dbj|AB027049.1|AB027049 Oryzias latipes MF-Hox13-2 homeobox... 70 2e-10
ref|XM_062808.2| Homo sapiens similar to bA438F9.1 (novel p... 70 2e-10
dbj|AB044157.1|AB044157 Homo sapiens mRNA for homeobox prot... 70 2e-10
dbj|AB027047.1|AB027047 Oryzias latipes MF-Hox13-1 homeobox... 70 3e-10
gb|J03770.1|MUSHOX42A Mouse homeobox protein (hox-4.2) mRNA... 70 4e-10
emb|AJ133025.1|MAB133025 Megaselia abdita zen gene, exons 1-2 70 4e-10
gb|AF124592.1|AF124592 Cassiopea xamachana Scox-2 homeodoma... 70 4e-10
gb|AY036893.1| Podocoryne carnea transcription factor Cnox4... 69 6e-10
gb|AF321227.1|AF321227 Tribolium castaneum Ftz (ftz), Scr (... 69 6e-10
gb|AF071257.1|AF071257 Danio rerio homeobox protein (hoxc10... 69 6e-10
emb|AJ005421.1|TCAJ5421 Tribolium castaneum mRNA for caudal... 69 6e-10
ref|NM_022852.1| Rattus norvegicus pancreatic and duodenal ... 69 7e-10
gb|U04833.1|RNU04833 Rattus norvegicus NEDH islet/duodenum ... 69 7e-10
gb|S67435.1|S67435 somatostatin transactivating factor-1 [r... 69 7e-10
ref|NM_013553.1| Mus musculus homeo box C4 (Hoxc4), mRNA 69 9e-10
emb|X69019.1|MMHOX35MR M.musculus Hox-3.5 mRNA 69 9e-10
gb|AF144680.1|AF144680 Lingula anatina Post-2 homeodomain p... 69 9e-10
emb|X74323.1|GDHOXA2 G.gallus mRNA for Hoxa2 protein 69 9e-10
emb|X16134.1|DMABDBP3 Drosophila Abd-B P3 mRNA 69 9e-10
gb|AF144892.1|AF144892 Priapulus caudatus HB4 homeodomain p... 69 9e-10
gb|M21173.1|DROBXCA D.melanogaster iab-7 mRNA, partial cds,... 69 9e-10
ref|XM_082445.1| Abdominal B, mRNA 69 9e-10
emb|X15080.1|DMBX189B Drosophila pH189 mRNA of distal BX-C ... 69 9e-10
gb|AF043432.2|AF043432 Gallus gallus Mox-1 related protein ... 69 9e-10
dbj|AK016033.1|AK016033 Mus musculus adult male testis cDNA... 69 9e-10
dbj|AK020261.1|AK020261 Mus musculus adult male cecum cDNA,... 69 9e-10
ref|NM_080157.1| Drosophila melanogaster Abdominal B (Abd-B... 69 9e-10
emb|X51663.1|DMABDBCLA D.melanogaster RNA for Abd-B gene, c... 69 9e-10
ref|NM_008814.1| Mus musculus pancreatic and duodenal homeo... 69 9e-10
emb|X74342.1|MMIPF1 M.musculus mRNA for IPF1 protein 69 9e-10
gb|M26884.1|XELHOXAB2 X.laevis homeobox protein (Hox1A) gen... 69 9e-10
ref|NM_014620.1| Homo sapiens homeo box C4 (HOXC4), mRNA 69 9e-10
emb|X07495.1|HSHOX329 Human mRNA for cp19 homeobox from HOX... 69 9e-10
ref|NM_008178.1| Mus musculus genomic screened homeo box 1 ... 68 1e-09
gb|U21224.1|MMU21224 Mus musculus homeobox Gsh-1 mRNA, comp... 68 1e-09
ref|NM_010469.1| Mus musculus homeo box D4 (Hoxd4), mRNA 68 1e-09
gb|U32943.1|SAU32943 Schistocerca americana Antennapedia ho... 68 1e-09
ref|NG_000242.1| Drosophila melanogaster bicoid (bcd) on ch... 68 1e-09
emb|AL390738.4|AL390738 Human DNA sequence from clone RP11-... 68 1e-09
gb|AE003674.2|AE003674 Drosophila melanogaster genomic scaf... 68 1e-09
emb|X68347.1|SZEN1A Drosophila sp. zerknuellt (zen) z1 gene 68 1e-09
gb|U04302.1|U04302 Xenopus laevis homeobox protein (xCAD2) ... 68 1e-09
gb|AE001572.2|AE001572 Drosophila melanogaster Antennapedia... 68 1e-09
ref|NM_057445.1| Drosophila melanogaster zerknullt (zen), t... 68 1e-09
gb|AC002512.1|AC002512 Drosophila melanogaster (P1 DS00276 ... 68 1e-09
gb|AC095014.1| Drosophila melanogaster, chromosome 3R, regi... 68 1e-09
dbj|AB044158.1|AB044158 Homo sapiens gene for homeobox prot... 68 1e-09
gb|U19238.1|AMU19238 Ambystoma mexicanum homeobox protein (... 68 1e-09
ref|NG_000212.1| Drosophila melanogaster zerknullt (zen) on... 68 1e-09
emb|X16849.1|XLHBOX8 Xenopus laevis XlHbox 8 gene for homeo... 68 1e-09
gb|AF417198.1|AF417198 Silurana tropicalis cad2 mRNA, compl... 68 2e-09
gb|AF071234.1|AF071234 Petromyzon marinus homeobox protein ... 68 2e-09
ref|NM_057606.1| Drosophila melanogaster caudal (cad), tran... 68 2e-09
gb|AF080565.1|AF080565 Anopheles gambiae Antennapedia homeo... 68 2e-09
gb|AY069565.1| Drosophila melanogaster LD29596 full length ... 68 2e-09
gb|AF052054.1|AF052054 Pristionchus pacificus homeotic prot... 68 2e-09
ref|NG_000352.1| Drosophila melanogaster caudal (cad) on ch... 67 2e-09
emb|X57158.1|CHCHOXM Chicken CHOX M mRNA for HOX-4.3-relate... 67 2e-09
gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome ... 67 2e-09
gb|AE003668.3|AE003668 Drosophila melanogaster genomic scaf... 67 2e-09
gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence... 67 2e-09
emb|X07104.1|XLHBOX4 Xenopus mRNA containing homeobox (XlHb... 67 2e-09
gb|M62870.1|HYDCNOX2A Hydra vulgaris antennapedia class hom... 67 2e-09
dbj|D16683.1|BMOSHOWA Silkworm mRNA, homeobox gene caudal (... 67 2e-09
gb|AF417197.1|AF417197 Silurana tropicalis cad1 mRNA, compl... 67 2e-09
gb|S79684.1|S79684S1 Hirudo medicinalis homeobox protein (L... 67 2e-09
emb|AJ277388.1|HVU277388 Hydra vulgaris mRNA for cnox-2 hom... 67 2e-09
gb|BC011082.1|BC011082 Mus musculus, Similar to mesenchyme ... 67 3e-09
ref|NM_005193.1| Homo sapiens caudal type homeo box transcr... 67 3e-09
gb|AF239666.1|AF239666 Homo sapiens CDX1 homeobox protein (... 67 3e-09
ref|XM_008351.3| Homo sapiens mesenchyme homeo box 1 (MEOX1... 67 3e-09
gb|U15212.1|HSU15212 Human caudal-type homeobox protein (CD... 67 3e-09
gb|AF031246.1|AF031246 Ambystoma mexicanum homeobox transcr... 67 3e-09
gb|AF112141.1|AF112141 Oryzias latipes homeodomain transcri... 67 3e-09
ref|XM_003791.1| Homo sapiens caudal type homeo box transcr... 67 3e-09
gb|U51095.1|HSU51095 Human homeobox protein Cdx1 mRNA, comp... 67 3e-09
ref|NM_001804.1| Homo sapiens caudal type homeo box transcr... 67 3e-09
gb|L20432.1|XELMOX2 Xenopus laevis homeobox protein (MOX2) ... 67 3e-09
ref|NM_004527.1| Homo sapiens mesenchyme homeo box 1 (MEOX1... 67 3e-09
emb|Z15103.1|MMMOX1G M.musculus Mox-1 mRNA 67 3e-09
gb|U10492.1|HSMOX1 Human Mox1 protein (MOX1) mRNA, complete... 67 3e-09
ref|NM_010791.1| Mus musculus mesenchyme homeobox 1 (Meox1)... 67 3e-09
emb|Z14313.1|HRLOX2MR H.robusta Lox2 mRNA 67 4e-09
gb|AF137385.1| Helobdella triserialis LOX18 homeodomain pro... 67 4e-09
ref|NM_019558.1| Homo sapiens homeo box D8 (HOXD8), mRNA 67 4e-09
emb|X68324.1|BRHOX34A B.rerio hox-3.4 gene for homeobox pro... 67 4e-09
ref|NM_007674.1| Mus musculus caudal type homeo box 4 (Cdx4... 67 4e-09
gb|L08061.1|MUSCDX4A Mus musculus homeobox protein (cdx 4) ... 67 4e-09
ref|NM_006735.1| Homo sapiens homeo box A2 (HOXA2), mRNA 67 4e-09
gb|U92575.1|FRU92575 Fugu rubripes homeobox protein HOXB-4 ... 67 4e-09
emb|AJ401088.1|GGA401088 Gallus gallus mRNA for MOX-2 protein 67 4e-09
emb|X17566.1|HMLOX2G H.medicinalis Lox2 gene (homeobox gene) 67 4e-09
ref|NM_008268.1| Mus musculus homeo box B5 (Hoxb5), mRNA 66 5e-09
gb|M26283.1|MUSHOX21A Mouse homeobox (Hox2.1) protein mRNA,... 66 5e-09
gb|U41840.1|EDU41840 Eleutheria dichotoma Cnox3 homeodomain... 66 5e-09
gb|AF071247.1|AF071247 Danio rerio homeobox protein (hoxa5a... 66 5e-09
emb|X66958.1|BRCAD1 B.rerio caudal homeobox mRNA ZF-cad1 66 5e-09
gb|AF151696.1|AF151696 Pristionchus pacificus MAB-5 mRNA, c... 66 5e-09
ref|XM_008561.1| Homo sapiens homeo box B5 (HOXB5), mRNA 66 5e-09
gb|AF245689.1|AF245689 Acropora millepora homeodomain prote... 66 5e-09
dbj|AK012146.1|AK012146 Mus musculus 10 days embryo whole b... 66 5e-09
dbj|AB046532.1|AB046532 Gallus gallus CdxA mRNA for caudal-... 66 5e-09
dbj|AB026955.1|AB026955 Oryzias latipes mRNA for HOXC4A, co... 66 5e-09
emb|AJ005422.1|TCAJ5422 Tribolium castaneum mRNA for caudal... 66 5e-09
emb|X04706.1|HSHOM4 Human homeobox gene (clone HHO.c13) 66 5e-09
emb|X80668.1|CCCDX1 C.carpio cdx1 mRNA 66 5e-09
ref|NM_002147.1| Homo sapiens homeo box B5 (HOXB5), mRNA 66 5e-09
gb|M92299.1|HUMHOX2A Human homeobox 2.1 protein (HOX2A) mRN... 66 5e-09
gb|AF085283.1|AF085283 Nematostella vectensis hox2 protein ... 66 5e-09
gb|M26679.1|HUMHOX13G Homo sapiens homeobox protein (HOX-1.... 66 5e-09
dbj|AB030175.1|AB030175 Dicyema orientale mRNA for DoxC, co... 66 5e-09
gb|M20705.1|DROANTPRB D.melanogaster antennapedia gene (Ant... 66 6e-09
gb|M20704.1|DROANTPRA Drosophila melanogaster antennapedia ... 66 6e-09
ref|NM_079525.1| Drosophila melanogaster Antennapedia (Antp... 66 6e-09
gb|BC016763.1|BC016763 Homo sapiens, clone MGC:22628 IMAGE:... 66 6e-09
ref|XM_042818.1| Homo sapiens homeo box D4 (HOXD4), mRNA 66 6e-09
gb|S76300.1|S76300 Hox-B|Hox-2 {clone 17b} [rats, Sprague-D... 66 6e-09
emb|X03062.1|DMCAD Drosophila caudal (cad) mRNA fragment wi... 66 6e-09
gb|M21070.1|DROCADA2 D.melanogaster caudal gene (cad) encod... 65 8e-09
emb|X16846.1|GDGHOX21 Chicken homeobox gene Ghox 2.1 fragment 65 8e-09
emb|Z35143.1|BFHOX2G B.floridae Hox-2 gene for homeobox pro... 65 8e-09
ref|NM_010453.1| Mus musculus homeo box A5 (Hoxa5), mRNA 65 8e-09
emb|X12802.1|BRRZF21 Zebrafish mRNA for homeotic protein ZF-21 65 8e-09
emb|X07381.1|BRHOX21 Zebrafish Hox-2.1 gene homologue (ZF-21) 65 8e-09
emb|X68248.1|BRHOX2A B.rerio DNA hox-2.1 and hox-2.2 genes 65 8e-09
ref|XM_040801.1| Homo sapiens homeo box A5 (HOXA5), mRNA 65 8e-09
ref|NM_019102.1| Homo sapiens homeo box A5 (HOXA5), mRNA 65 8e-09
gb|AF287967.1|AF287967 Homo sapiens homeobox B7 (HOXB7) gen... 65 8e-09
ref|NM_014621.1| Homo sapiens homeo box D4 (HOXD4), mRNA 65 8e-09
emb|AL645798.2| Zebrafish DNA sequence from clone XX-227H09... 65 8e-09
emb|X16840.1|MMHX13 Mouse Hox 1.3 mRNA for a homeodomain pr... 65 8e-09
gb|M36604.1|MUSHOX13B Mouse homeobox 1.3 protein mRNA, comp... 65 8e-09
gb|AF071253.1|AF071253 Danio rerio homeobox protein (hoxb5b... 65 8e-09
emb|X52672.1|GGCHOXA Chicken Chox-a mRNA for homeodomain pr... 65 8e-09
gb|BC011063.1|BC011063 Mus musculus, Similar to homeo box A... 65 8e-09
gb|K02572.1|HUMHOM2 Human putative homeo box Hu1 65 8e-09
gb|M28021.1|MUSHOX13A Mouse homeo domain protein (Hox 1.3) ... 65 8e-09
emb|Y00208.1|MMHOX13 Mouse Hox 1.3 gene for homeo domain pr... 65 8e-09
dbj|AB050887.1|AB050887 Branchiostoma floridae DNA, enhance... 65 8e-09
gb|AF052463.1|AF052463 Branchiostoma floridae homeobox prot... 65 8e-09
emb|X03033.1|MMHOBOX1 Mus musculus gene for homeo-box prote... 65 8e-09
dbj|AB028207.1|AB028207 Branchiostoma floridae AmphiHox2 ge... 65 8e-09
dbj|AB026962.1|AB026962 Oryzias latipes gene for HOXB5B, pa... 65 8e-09
gb|BC013682.1|BC013682 Homo sapiens, clone MGC:9376 IMAGE:3... 65 8e-09
gb|M13373.1|DROANTDFD D.melanogaster (ANT-C locus) deformed... 65 1e-08
ref|NM_024016.1| Homo sapiens homeo box B8 (HOXB8), mRNA 65 1e-08
emb|X95414.1|DTHOXA Girardia tigrina DthoxA gene, partial 65 1e-08
gb|AF036325.1|AF036325 Danio rerio homeobox protein PDX-1 (... 65 1e-08
emb|Z32525.1|DTDNBIPR D.tigrina mRNA for DNA-binding protein 65 1e-08
gb|AE003673.2|AE003673 Drosophila melanogaster genomic scaf... 65 1e-08
emb|X13721.1|MMHOX24 Murine Hox-2.4 mRNA 65 1e-08
gb|S70444.1|S70444 Hoxa-4 [mice, testis, Genomic, 3002 nt] 65 1e-08
emb|X66861.1|MMHOX14B Mus musculus Hox-1.4 gene 65 1e-08
dbj|AB029759.1|AB029759 Paralichthys olivaceus mRNA for Hox... 65 1e-08
emb|X68045.1|BFHOMEOG B.floridae gene for amphihox3 65 1e-08
ref|NG_000557.1| Drosophila melanogaster Deformed (Dfd) on ... 65 1e-08
emb|X05136.1|DMDFD Drosophila mRNA for Deformed (Dfd) protein 65 1e-08
dbj|D83534.1|D83534 Bombyx mori Dfd mRNA, complete cds 65 1e-08
ref|NM_057853.1| Drosophila melanogaster Deformed (Dfd), tr... 65 1e-08
ref|NM_057320.1| Drosophila melanogaster proboscipedia (pb)... 65 1e-08
gb|S67058.1|S67058 Hoxa-4/Hox-1.4=Hoxa-4 [mice, Genomic, 25... 65 1e-08
gb|AF004387.1|AF004387 Helobdella robusta homeodomain prote... 65 1e-08
gb|AF124591.1|AF124591 Cassiopea xamachana Scox-1 homeodoma... 65 1e-08
ref|NM_010836.1| Mus musculus homeo box, msh-like 3 (Msx3),... 65 1e-08
gb|U62523.1|MMU62523 Mus musculus Msx3 mRNA, complete cds 65 1e-08
gb|M18399.1|MUSHOX24A Mouse homeo box (Hox2.4) region 65 1e-08
gb|AF104002.1|AF104002 Thermobia domestica abdominal-B prot... 65 1e-08
gb|M37565.1|RATHOMBX1A Rat homeobox protein R1a gene, compl... 65 1e-08
gb|AF035573.1|AF035573 Oryzias latipes developmental transc... 65 1e-08
dbj|AB024407.1|AB024407 Dugesia japonica mRNA for PLOX3-Dj,... 65 1e-08
emb|X99630.1|HSHOXC11 H.sapiens mRNA for HOXC11 protein, ex... 65 1e-08
gb|AF228509.1|AF228509 Tribolium castaneum prothoraxless mR... 65 1e-08
emb|X64626.1|CVCNOX2 C.viridissima homeobox gene cnox2 mRNA 65 1e-08
gb|AF277988.1|AF277988 Caenorhabditis briggsae LIN-39 mRNA,... 64 2e-08
ref|XM_088266.1| Homo sapiens mesenchyme homeo box 2 (growt... 64 2e-08
gb|AF187068.1|AF187068 Tribolium castaneum clone pcmxp5 pro... 64 2e-08
gb|L36328.1|HUMGAX Homo sapiens GAX mRNA, complete cds 64 2e-08
gb|AF452568.1|AF452568 Tribolium castaneum homeodomain tran... 64 2e-08
gb|S82178.1|S82168S2 IPF-1=insulin promoter factor 1 [human... 64 2e-08
emb|Z16406.1|MOX2A Mus musculus Mox-2A mRNA 64 2e-08
ref|NM_057322.1| Drosophila melanogaster proboscipedia (pb)... 64 2e-08
ref|NM_066253.1| C. elegans homeobox gene lin-39 64 2e-08
ref|NM_002141.1| Homo sapiens homeo box A4 (HOXA4), mRNA 64 2e-08
emb|AJ334855.1|HSA334855 Homo sapiens genomic sequence surr... 64 2e-08
gb|U81038.1|TCU81038 Tribolium castaneum transcription fact... 64 2e-08
gb|M74297.1|HUMHOX14 Human homeobox 1.4 protein mRNA, compl... 64 2e-08
emb|X63728.1|DMPROB D.melanogaster proboscipedia mRNA 64 2e-08
gb|AF363233.1|AF363233 Phascolion strombi homeodomain trans... 64 2e-08
gb|AF268446.1|AF268446 Podocoryne carnea GSX transcription ... 64 2e-08
emb|AL353195.14|AL353195 Human DNA sequence from clone RP11... 64 2e-08
ref|NM_005924.1| Homo sapiens mesenchyme homeo box 2 (growt... 64 2e-08
emb|X82629.1|HSMOX2 H.sapiens mRNA for Mox-2 64 2e-08
dbj|D16684.1|BMOAHP Silkworm mRNA for Antennapedia homologu... 64 2e-08
ref|NM_017149.1| Rattus norvegicus mesenchyme homeobox 2 (M... 64 2e-08
emb|Z17223.1|RNGAXMR R.norvegicus mRNA encoding Gax protein 64 2e-08
emb|AJ327718.1|HSA327718 Homo sapiens genomic sequence surr... 64 2e-08
gb|M24085.1|ZEFZF13A Zebrafish homeobox protein (ZF-13) gen... 64 2e-08
gb|AF071252.1|AF071252 Danio rerio homeobox protein (hoxb4a... 64 2e-08
emb|X92654.2|SGHOX3 S.gregaria mRNA for group 3 homeodomain... 64 2e-08
gb|L19248.1|CELHOMDOMB Caenorhabditis elegans homeodomain p... 64 2e-08
emb|X63729.1|DMAPROB D.melanogaster alternative probosciped... 64 2e-08
gb|AF308821.1|AF308821 Branchiostoma floridae Mnx homeodoma... 64 2e-08
gb|BC002076.1|BC002076 Mus musculus, Similar to mesenchyme ... 64 2e-08
gb|AF461700.1|AF461700 Gallus gallus MOX-2 homeobox mRNA, p... 64 2e-08
gb|U82487.1|BFU82487 Branchiostoma floridae engrailed prote... 64 2e-08
gb|L19639.1|CELLIN39A Caenorhabditis elegans homeobox prote... 64 2e-08
emb|Y16571.1|LSHOX3 Lineus sanguineus Hox-3 gene 64 2e-08
ref|XM_004917.1| Homo sapiens homeo box A4 (HOXA4), mRNA 64 2e-08
ref|NM_057323.1| Drosophila melanogaster proboscipedia (pb)... 64 2e-08
ref|NM_057321.1| Drosophila melanogaster proboscipedia (pb)... 64 2e-08
gb|BC017021.1|BC017021 Homo sapiens, mesenchyme homeo box 2... 64 2e-08
gb|AF035260.1|HUMPDX3 Homo sapiens insulin promoter factor ... 64 2e-08
ref|NM_023963.1| Rattus norvegicus CDX2 protein (Cdx2), mRNA 64 2e-08
emb|AJ278466.1|RNO278466 Rattus norvegicus mRNA for CDX2 pr... 64 2e-08
gb|AF275310.1| Haliotis rufescens Hox5 mRNA, complete cds 64 2e-08
emb|AJ132670.1|DME132670 Drosophila melanogaster buttonless... 64 2e-08
gb|M87803.1|MUSHOX43 Mus musculus homeobox protein (Hox-4.3... 64 2e-08
gb|U51096.1|HSU51096 Human homeobox protein Cdx2 mRNA, comp... 64 2e-08
gb|AC001650.1|AC001650 Drosophila melanogaster DNA sequence... 64 2e-08
ref|NG_000213.1| Drosophila melanogaster zerknullt-related ... 64 2e-08
emb|X56561.1|MMHOX43 Mouse Hox-4.3 gene, homeo box-containi... 64 2e-08
ref|NG_000110.1| Drosophila melanogaster proboscipedia (pb)... 64 2e-08
emb|X79494.1|DHFTZGEN D.hydei fushi tarazu gene 64 2e-08
ref|XM_039995.3| Homo sapiens caudal type homeo box transcr... 64 2e-08
ref|NM_001265.1| Homo sapiens caudal type homeo box transcr... 64 2e-08
emb|Y13709.1|HSCDX2 Homo sapiens caudal-type homeobox gene ... 64 2e-08
gb|AF163858.1|AF163858 Chaetopterus variopedatus homeoprote... 64 2e-08
emb|X68348.1|DSZEN2A Drosophila sp. zerknuellt (zen) z2 gene 64 2e-08
ref|NM_057446.1| Drosophila melanogaster zerknullt-related ... 64 2e-08
gb|AY014294.1|AY014293S2 Homo sapiens HOXB8 gene, exon 2 an... 64 2e-08
gb|M26883.1|XELHOXAB1 X.laevis homeobox protein (Hox1B) gen... 64 2e-08
gb|BC014461.1|BC014461 Homo sapiens, Similar to caudal type... 64 2e-08
emb|AJ130766.1|BFL130766 Branchiostoma floridae mRNA for Ms... 64 2e-08
ref|NM_019247.1| Rattus norvegicus paired-like homeodomain ... 64 2e-08
emb|AJ011005.2|RNO011005 Rattus norvegicus mRNA for Ptx3 pr... 64 2e-08
>ref|NM_008264.1| Mus musculus homeo box A13 (Hoxa13), mRNA
Length = 1318
Score = 488 bits (1255), Expect = e-136
Identities = 240/386 (62%), Positives = 240/386 (62%)
Frame = +2
Query: 1 MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNMEXXXXXXXXXXXXXXXXXXXXXXXX 60
MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNME
Sbjct: 107 MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNMEGAAAAAAAAAAAAAAGAGGGGFPH 286
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXNQCRNLMAHXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
NQCRNLMAH
Sbjct: 287 PAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLAPGAAAAYSSAPGEAPPSAAAAA 466
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPYGYFGSGYYP 180
LPYGYFGSGYYP
Sbjct: 467 AAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSAAAQSSSGPAALPYGYFGSGYYP 646
Query: 181 CARMGPHPNXXXXXXXXXXXXXXXXXXXXXXXGPAAEEFSSRAKEFAFYHQGYAAGPYHH 240
CARMGPHPN GPAAEEFSSRAKEFAFYHQGYAAGPYHH
Sbjct: 647 CARMGPHPNAIKSCAQPASAAAAFADKYMDTAGPAAEEFSSRAKEFAFYHQGYAAGPYHH 826
Query: 241 HQPVPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQTQPPHLW 300
HQPVPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQTQPPHLW
Sbjct: 827 HQPVPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQTQPPHLW 1006
Query: 301 KSTLPDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLS 360
KSTLPDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLS
Sbjct: 1007KSTLPDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLS 1186
Query: 361 ERQVTIWFQNRRVKEKKVINKLKTTS 386
ERQVTIWFQNRRVKEKKVINKLKTTS
Sbjct: 1187ERQVTIWFQNRRVKEKKVINKLKTTS 1264
>ref|XM_004921.1| Homo sapiens homeo box A13 (HOXA13), mRNA
Length = 1167
Score = 481 bits (1237), Expect = e-134
Identities = 238/388 (61%), Positives = 239/388 (61%), Gaps = 2/388 (0%)
Frame = +1
Query: 1 MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNMEXXXXXXXXXXXXXXXXXXXXXXXX 60
MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNME
Sbjct: 1 MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNMEGAAAAAAAAAAAAAAGAGGGGFPH 180
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXNQCRNLMAHXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
NQCRNLMAH
Sbjct: 181 PAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLAPGAASAYSSAPGEAPPSAAAAA 360
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPYGYFGSGYYP 180
LPYGYFGSGYYP
Sbjct: 361 AAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSAAAQSSSGPAALPYGYFGSGYYP 540
Query: 181 CARMGPHPNXXXXXX--XXXXXXXXXXXXXXXXXGPAAEEFSSRAKEFAFYHQGYAAGPY 238
CARMGPHPN GPAAEEFSSRAKEFAFYHQGYAAGPY
Sbjct: 541 CARMGPHPNAIKSCAQPASAAAAAAFADKYMDTAGPAAEEFSSRAKEFAFYHQGYAAGPY 720
Query: 239 HHHQPVPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQTQPPH 298
HHHQP+PGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQ QPPH
Sbjct: 721 HHHQPMPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQAQPPH 900
Query: 299 LWKSTLPDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTN 358
LWKSTLPDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTN
Sbjct: 901 LWKSTLPDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTN 1080
Query: 359 LSERQVTIWFQNRRVKEKKVINKLKTTS 386
LSERQVTIWFQNRRVKEKKVINKLKTTS
Sbjct: 1081LSERQVTIWFQNRRVKEKKVINKLKTTS 1164
>ref|NM_000522.1| Homo sapiens homeo box A13 (HOXA13), mRNA
Length = 1167
Score = 476 bits (1225), Expect = e-132
Identities = 237/388 (61%), Positives = 238/388 (61%), Gaps = 2/388 (0%)
Frame = +1
Query: 1 MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNMEXXXXXXXXXXXXXXXXXXXXXXXX 60
MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNME
Sbjct: 1 MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNMEGAAAAAAAAAAAAAAGAGGGGFPH 180
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXNQCRNLMAHXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
NQCRNLMAH
Sbjct: 181 PAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLAPGAASAYSSAPGEAPPSAAAAA 360
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPYGYFGSGYYP 180
LPYGYFGSGYYP
Sbjct: 361 AAAAAAAAAAAAASSSGGPGPAGPAAAEAAKQCSPCSAAAQSSSGPAALPYGYFGSGYYP 540
Query: 181 CARMGPHPNXXXXXXX--XXXXXXXXXXXXXXXXGPAAEEFSSRAKEFAFYHQGYAAGPY 238
CARMGP PN GPAAEEFSSRAKEFAFYHQGYAAGPY
Sbjct: 541 CARMGPPPNAIKSCPQPPSAAAAAAFADKYMDTAGPAAEEFSSRAKEFAFYHQGYAAGPY 720
Query: 239 HHHQPVPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQTQPPH 298
HHHQP+PGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQ QPPH
Sbjct: 721 HHHQPMPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQAQPPH 900
Query: 299 LWKSTLPDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTN 358
LWKSTLPDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTN
Sbjct: 901 LWKSTLPDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTN 1080
Query: 359 LSERQVTIWFQNRRVKEKKVINKLKTTS 386
LSERQVTIWFQNRRVKEKKVINKLKTTS
Sbjct: 1081LSERQVTIWFQNRRVKEKKVINKLKTTS 1164
>gb|AY030050.1| Gallus gallus homeo box A13 (HOXA13) mRNA, complete cds
Length = 921
Score = 332 bits (851), Expect = 3e-89
Identities = 168/218 (77%), Positives = 178/218 (81%)
Frame = +1
Query: 169 LPYGYFGSGYYPCARMGPHPNXXXXXXXXXXXXXXXXXXXXXXXGPAAEEFSSRAKEFAF 228
LPYGYFGSGYYPC RM H + EEF+SRAKEFAF
Sbjct: 250 LPYGYFGSGYYPC-RMTHH-----NAIKSCAQPASTFADKYMDTSVSGEEFTSRAKEFAF 411
Query: 229 YHQGYAAGPYHHHQPVPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMY 288
Y QGYAAGPY QPVPGYLD+PVVP +GGPGE RH+ L LPM+SYQPWA+ NGWNGQ+Y
Sbjct: 412 Y-QGYAAGPY---QPVPGYLDVPVVPTIGGPGEPRHDSL-LPMDSYQPWAITNGWNGQVY 576
Query: 289 CPKEQTQPPHLWKSTLPDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKD 348
CPKEQ+QPPHLWKSTLPDVVSHPSDA+SYRRGRKKRVPYTKVQLKELEREYATNKFITKD
Sbjct: 577 CPKEQSQPPHLWKSTLPDVVSHPSDANSYRRGRKKRVPYTKVQLKELEREYATNKFITKD 756
Query: 349 KRRRISATTNLSERQVTIWFQNRRVKEKKVINKLKTTS 386
KRRRISATTNLSERQVTIWFQNRRVKEKKVINKLKTTS
Sbjct: 757 KRRRISATTNLSERQVTIWFQNRRVKEKKVINKLKTTS 870
>gb|U59322.1|MMU59322 Mus musculus transcription factor HOXA13 (Hoxa13) gene, complete
cds
Length = 2280
Score = 330 bits (846), Expect = 1e-88
Identities = 159/305 (52%), Positives = 159/305 (52%)
Frame = +1
Query: 1 MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNMEXXXXXXXXXXXXXXXXXXXXXXXX 60
MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNME
Sbjct: 355 MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNMEGAAAAAAAAAAAAAAGAGGGGFPH 534
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXNQCRNLMAHXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
NQCRNLMAH
Sbjct: 535 PAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLAPGAAAAYSSAPGEAPPSAAAAA 714
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPYGYFGSGYYP 180
LPYGYFGSGYYP
Sbjct: 715 AAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSAAAQSSSGPAALPYGYFGSGYYP 894
Query: 181 CARMGPHPNXXXXXXXXXXXXXXXXXXXXXXXGPAAEEFSSRAKEFAFYHQGYAAGPYHH 240
CARMGPHPN GPAAEEFSSRAKEFAFYHQGYAAGPYHH
Sbjct: 895 CARMGPHPNAIKSCAQPASAAAAFADKYMDTAGPAAEEFSSRAKEFAFYHQGYAAGPYHH 1074
Query: 241 HQPVPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQTQPPHLW 300
HQPVPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQTQPPHLW
Sbjct: 1075HQPVPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQTQPPHLW 1254
Query: 301 KSTLP 305
KSTLP
Sbjct: 1255KSTLP 1269
Score = 163 bits (412), Expect = 3e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = +1
Query: 304 LPDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQ 363
L DVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQ
Sbjct: 1978 LTDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQ 2157
Query: 364 VTIWFQNRRVKEKKVINKLKTTS 386
VTIWFQNRRVKEKKVINKLKTTS
Sbjct: 2158 VTIWFQNRRVKEKKVINKLKTTS 2226
>gb|AC004080.2| Homo sapiens chromosome 7 clone RP1-170O19, complete sequence
Length = 129355
Score = 323 bits (828), Expect = 2e-86
Identities = 157/307 (51%), Positives = 158/307 (51%), Gaps = 2/307 (0%)
Frame = -1
Query: 1 MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNMEXXXXXXXXXXXXXXXXXXXXXXXX 60
MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNME
Sbjct: 73447 MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNMEGAAAAAAAAAAAAAAGAGGGGFPH 73268
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXNQCRNLMAHXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
NQCRNLMAH
Sbjct: 73267 PAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLAPGAASAYSSAPGEAPPSAAAAA 73088
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPYGYFGSGYYP 180
LPYGYFGSGYYP
Sbjct: 73087 AAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSAAAQSSSGPAALPYGYFGSGYYP 72908
Query: 181 CARMGPHPNXXXXXX--XXXXXXXXXXXXXXXXXGPAAEEFSSRAKEFAFYHQGYAAGPY 238
CARMGPHPN GPAAEEFSSRAKEFAFYHQGYAAGPY
Sbjct: 72907 CARMGPHPNAIKSCAQPASAAAAAAFADKYMDTAGPAAEEFSSRAKEFAFYHQGYAAGPY 72728
Query: 239 HHHQPVPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQTQPPH 298
HHHQP+PGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQ QPPH
Sbjct: 72727 HHHQPMPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQAQPPH 72548
Query: 299 LWKSTLP 305
LWKSTLP
Sbjct: 72547 LWKSTLP 72527
Score = 162 bits (410), Expect = 5e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = -3
Query: 304 LPDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQ 363
L DVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQ
Sbjct: 71819 LLDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQ 71640
Query: 364 VTIWFQNRRVKEKKVINKLKTTS 386
VTIWFQNRRVKEKKVINKLKTTS
Sbjct: 71639 VTIWFQNRRVKEKKVINKLKTTS 71571
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/67 (55%), Positives = 52/67 (77%)
Frame = -3
Query: 312 SDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNR 371
S ++ +R RKKR PYTK Q++ELERE+ + +I K+KR ++S NL++RQV IWFQNR
Sbjct: 56411 SPSTGGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNR 56232
Query: 372 RVKEKKV 378
R+KEKK+
Sbjct: 56231 RMKEKKI 56211
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = -2
Query: 318 RRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNRRVKEKK 377
R RKKR PYTK Q ELE+E+ N ++T+D+R ++ NL+ERQV IWFQNRR+K KK
Sbjct: 37182 RSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 37003
Query: 378 V 378
+
Sbjct: 37002 I 37000
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/61 (54%), Positives = 47/61 (76%)
Frame = -1
Query: 318 RRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNRRVKEKK 377
+ GRKKR PYTK Q ELE+E+ N ++T+++R IS + +L++RQV IWFQNRR+K KK
Sbjct: 45502 KSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKK 45323
Query: 378 V 378
+
Sbjct: 45322 M 45320
Score = 66.2 bits (160), Expect = 5e-09
Identities = 39/93 (41%), Positives = 57/93 (60%), Gaps = 2/93 (2%)
Frame = -2
Query: 296 PPHLWKSTLPDVVSHPSDASSYR--RGRKKRVPYTKVQLKELEREYATNKFITKDKRRRI 353
P LWK+ + + S A + G++ R YT+ Q ELE+E+ N+++T+ +R I
Sbjct: 15513 PGGLWKTGVGG*TADFSIADNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEI 15334
Query: 354 SATTNLSERQVTIWFQNRRVKEKKVINKLKTTS 386
+ LSERQ+ IWFQNRR+K KK NKLK+ S
Sbjct: 15333 AHALCLSERQIKIWFQNRRMKWKK-DNKLKSMS 15238
Score = 64.7 bits (156), Expect = 1e-08
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 13/97 (13%)
Frame = -3
Query: 294 TQPPHL--------WKSTLPDVVSHPSDAS---SYRRGRKKR--VPYTKVQLKELEREYA 340
+ PPHL ++S L ++ S S SY G KR YT+ Q+ ELE+E+
Sbjct: 3032 SSPPHLLSPPPFPLFRSLLLGLLFRGSGFSVNPSYNGGEPKRSRTAYTRQQVLELEKEFH 2853
Query: 341 TNKFITKDKRRRISATTNLSERQVTIWFQNRRVKEKK 377
N+++T+ +R I+ T LSERQV IWFQNRR+K KK
Sbjct: 2852 FNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 2742
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/63 (49%), Positives = 44/63 (69%)
Frame = -1
Query: 320 GRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNRRVKEKKVI 379
GR+ R YT+ Q ELE+E+ N+++T+ +R I+ L+ERQ+ IWFQNRR+K KK
Sbjct: 19267 GRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKE- 19091
Query: 380 NKL 382
NKL
Sbjct: 19090 NKL 19082
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/57 (45%), Positives = 40/57 (69%)
Frame = -2
Query: 321 RKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNRRVKEKK 377
++ R YT+ Q ELE+E+ N+++T+ +R I+ L+ERQ+ IWFQNRR+K KK
Sbjct: 28581 KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 28411
>gb|U82827.1|HSU82827 Human transcription factor HOXA13 (HOXA13) gene, complete cds
Length = 2014
Score = 318 bits (816), Expect = 4e-85
Identities = 156/307 (50%), Positives = 157/307 (50%), Gaps = 2/307 (0%)
Frame = +1
Query: 1 MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNMEXXXXXXXXXXXXXXXXXXXXXXXX 60
MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNME
Sbjct: 109 MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNMEGAAAAAAAAAAAAAAGAGGGGFPH 288
Query: 61 XXXXXXXXXXXXXXXXXXXXXXXXNQCRNLMAHXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
NQCRNLMAH
Sbjct: 289 PAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLAPGAASAYSSAPGEAPPSAAAAA 468
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPYGYFGSGYYP 180
LPYGYFGSGYYP
Sbjct: 469 AAAAAAAAAAAAASSSGGPGPAGPAAAEAAKQCSPCSAAAQSSSGPAALPYGYFGSGYYP 648
Query: 181 CARMGPHPNXXXXXXX--XXXXXXXXXXXXXXXXGPAAEEFSSRAKEFAFYHQGYAAGPY 238
CARMGP PN GPAAEEFSSRAKEFAFYHQGYAAGPY
Sbjct: 649 CARMGPPPNAIKSCPQPPSAAAAAAFADKYMDTAGPAAEEFSSRAKEFAFYHQGYAAGPY 828
Query: 239 HHHQPVPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQTQPPH 298
HHHQP+PGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQ QPPH
Sbjct: 829 HHHQPMPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQAQPPH 1008
Query: 299 LWKSTLP 305
LWKSTLP
Sbjct: 1009LWKSTLP 1029
Score = 162 bits (410), Expect = 5e-38
Identities = 82/83 (98%), Positives = 82/83 (98%)
Frame = +2
Query: 304 LPDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQ 363
L DVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQ
Sbjct: 1736 LLDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQ 1915
Query: 364 VTIWFQNRRVKEKKVINKLKTTS 386
VTIWFQNRRVKEKKVINKLKTTS
Sbjct: 1916 VTIWFQNRRVKEKKVINKLKTTS 1984
>gb|AC107365.2| Danio rerio, clone -241I7, complete sequence
Length = 128411
Score = 236 bits (603), Expect = 2e-60
Identities = 141/264 (53%), Positives = 161/264 (60%), Gaps = 46/264 (17%)
Frame = -3
Query: 169 LPYGYFGSG-YYPCARMGPHPNXXXXXXXXXXXXXXXXXXXXXXXGPAA---EEF-SSRA 223
+ YGYFG G YYPC RM H +A E++ SSRA
Sbjct: 104568 ISYGYFGGGGYYPC-RMSHHHGSGGGVKTCAQSPASGSPYGEKYMDTSASTGEDYTSSRA 104392
Query: 224 KEFAFYHQGYAAGPYHHHQPVPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALP-NG 282
KEFA Y YA+ PY QPVP YLD+PVV + GP E RHE L LPMESYQPWA+ +G
Sbjct: 104391 KEFALY-SSYASSPY---QPVPSYLDVPVVQAISGPSEPRHESL-LPMESYQPWAITTSG 104227
Query: 283 WNGQMYCPKEQTQPPHLWKSTLP------------------------------------- 305
WNGQ+YC KEQ Q ++WKS++P
Sbjct: 104226 WNGQVYCTKEQQQTGNVWKSSIPGKFILRIAKRKKIHINNKLRRYVHLSLNPFNIYVIMN 104047
Query: 306 --DVVSHP-SDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSER 362
+ VSH +D SS+RRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISA TNLSER
Sbjct: 104046 SIESVSHGGADGSSFRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISAQTNLSER 103867
Query: 363 QVTIWFQNRRVKEKKVINKLKTTS 386
QVTIWFQNRRVKEKKV+NKLK++S
Sbjct: 103866 QVTIWFQNRRVKEKKVVNKLKSSS 103795
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = -1
Query: 319 RGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNRRVKEKKV 378
R RKKR PYTK Q++ELERE+ + +I K+KR ++S NL++RQV IWFQNRR+KEKK+
Sbjct: 95822 RFRKKRCPYTKFQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKL 95643
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/64 (56%), Positives = 48/64 (74%)
Frame = -2
Query: 321 RKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNRRVKEKKVIN 380
RKKR PYTK Q+ ELE+E+ N ++T+D+R ++ NL+ERQV IWFQNRR+K KK N
Sbjct: 83443 RKKRCPYTKHQILELEKEFLFNTYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK-FN 83267
Query: 381 KLKT 384
K +T
Sbjct: 83266 KNET 83255
Score = 66.2 bits (160), Expect = 5e-09
Identities = 33/65 (50%), Positives = 47/65 (71%)
Frame = -2
Query: 320 GRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNRRVKEKKVI 379
G++ R YT+ Q ELE+E+ N+++T+ +R I+ T LSERQ+ IWFQNRR+K KK
Sbjct: 73786 GKRPRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK-D 73610
Query: 380 NKLKT 384
NKLK+
Sbjct: 73609 NKLKS 73595
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Frame = -2
Query: 315 SSYRRG--RKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNRR 372
+SY G ++ R YT+ Q ELE+E+ N+++T+ +R I+ T LSERQV IWFQNRR
Sbjct: 65905 ASYSGG