TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(104 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,164,257 sequences; 587,334,133 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_025273.1| Mus musculus 6-pyruvoyl-tetrahydropterin s... 215 5e-55
dbj|AK007401.1|AK007401 Mus musculus 10 day old male pancre... 215 5e-55
ref|NM_000281.1| Homo sapiens 6-pyruvoyl-tetrahydropterin s... 214 1e-54
gb|BC006324.1|BC006324 Homo sapiens, 6-pyruvoyl-tetrahydrop... 214 1e-54
gb|AF082858.1|AF082858 Homo sapiens pterin carbinolamine de... 214 1e-54
gb|L41559.1|HUMPCBDA Homo sapiens pterin-4a-carbinolamine d... 214 1e-54
gb|M83740.1|RATHOMEOA Rat cofactor mRNA sequence 214 1e-54
gb|M83742.1|HUMHOMEOA Human cofactor mRNA 212 4e-54
gb|M83741.1|MUSHOMEOA Mouse cofactor mRNA 206 2e-52
emb|AJ005157.1|GGAJ5157 Gallus gallus mRNA for dimerization... 206 4e-52
emb|Z37525.1|XLXDCOHMR X.laevis XDCoH mRNA 193 3e-48
dbj|AK012465.1|AK012465 Mus musculus 11 days embryo whole b... 152 7e-36
ref|XM_047749.1| Homo sapiens hypothetical protein DKFZp566... 142 7e-33
gb|AF190051.1|AF190051 Gallus gallus hepatocyte nuclear fac... 141 1e-32
ref|NM_032151.1| Homo sapiens hypothetical protein DKFZp566... 140 1e-32
emb|AL136721.1|HSM801689 Homo sapiens mRNA; cDNA DKFZp566K1... 140 1e-32
ref|NM_059581.1| Caenorhabditis elegans 139 3e-32
ref|NG_000696.1| Drosophila melanogaster pterin-4a-carbinol... 121 9e-27
gb|AF069297.1|AF069297 Drosophila melanogaster pterin-4a-ca... 121 9e-27
ref|NM_058012.1| Drosophila melanogaster pterin-4a-carbinol... 121 9e-27
gb|AE003770.1|AE003770 Drosophila melanogaster genomic scaf... 121 9e-27
gb|AC007892.4|AC007892 Drosophila melanogaster, chromosome ... 121 9e-27
gb|AF382144.1|AF382144 Drosophila virilis pterin 4alpha-car... 120 2e-26
emb|AL646074.1|AL646074 Ralstonia solanacearum GMI1000 chro... 112 6e-24
gb|AE009620.1|AE009620 Brucella melitensis strain 16M chrom... 103 3e-21
gb|AE005698.1|AE005698 Caulobacter crescentus section 24 o... 100 2e-20
gb|AF098993.1|CELT10B11 Caenorhabditis elegans cosmid T10B11 96 7e-19
emb|AJ005542.1|RNA005542 Rattus norvegicus DCoH gene 95 9e-19
emb|AL009227.1|SPAC27D7 S.pombe chromosome I cosmid c27D7 95 1e-18
gb|L41560.1|HUMPCBD Homo sapiens (clones HGPCD2 and HGPCD15... 94 2e-18
emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 comple... 94 3e-18
gb|L15410.1|HUMCDHA Human 4a-carbinolamine dehydratase gene... 92 6e-18
gb|AF168787.1|AF168787 Homo sapiens vanilloid receptor gene... 91 1e-17
emb|AJ005158.1|GGAJ5158 Gallus gallus DCoH gene, complete CDS 91 2e-17
gb|AC078911.11| Mus musculus Strain C57BL6/J Chromosome 2 R... 57 2e-15
gb|AE008181.1|AE008181 Agrobacterium tumefaciens str. C58 c... 84 3e-15
dbj|D90909.1|D90909 Synechocystis sp. PCC 6803 DNA, complet... 84 3e-15
gb|AE009214.1|AE009214 Agrobacterium tumefaciens strain C58... 84 3e-15
dbj|AP003003.2|AP003003 Mesorhizobium loti DNA, complete ge... 79 5e-14
gb|L15428.1|HUMCDHC Human 4a-carbinolamine dehydratase gene... 65 8e-10
gb|AE006824.1|AE006824 Sulfolobus solfataricus section 183 ... 64 2e-09
gb|L15427.1|HUMCDHB Human 4a-carbinolamine dehydratase gene... 63 5e-09
gb|AC008670.5| Homo sapiens chromosome 5 clone CTB-36O1, co... 60 3e-08
gb|AC001555.1|HSAC001555 Homo sapiens (subclone 1_d8 from B... 60 3e-08
dbj|AP003596.1|AP003596 Nostoc sp. PCC 7120 DNA, complete g... 58 2e-07
gb|L04537.1|RAT4ACRDHY Rat 4a-hydroxytetrahydrobiopterin de... 57 3e-07
dbj|AP000989.1|AP000989 Sulfolobus tokodaii genomic DNA, co... 57 3e-07
gb|AE000671.1|AE000671 Aquifex aeolicus section 3 of 109 of... 55 8e-07
gb|L81893.1|HSL81893 Homo sapiens (subclone 2_e10 from P1 H... 54 3e-06
gb|AC006077.1|AC006077 Homo sapiens chromosome 5, P1 clone ... 54 3e-06
gb|AE004067.1|AE004067 Xylella fastidiosa 9a5c, section 213... 52 7e-06
ref|NM_102721.1| Arabidopsis thaliana chromosome 1 CHR1v12... 47 3e-04
dbj|AB047767.1|AB047767 Meloidogyne arenaria DNA, polymorph... 46 5e-04
dbj|AB047765.1|AB047765 Meloidogyne incognita DNA, polymorp... 46 5e-04
dbj|AB047764.1|AB047764 Meloidogyne incognita DNA, polymorp... 46 5e-04
dbj|AB047763.1|AB047763 Meloidogyne arenaria DNA, polymorph... 46 5e-04
dbj|AB047762.1|AB047762 Meloidogyne javanica DNA, polymorph... 46 5e-04
dbj|AB047766.1|AB047766 Meloidogyne javanica DNA, polymorph... 44 0.002
emb|AL583922.1|MLEPRTN6 Mycobacterium leprae strain TN comp... 44 0.002
dbj|AB047761.1|AB047761 Meloidogyne incognita DNA, polymorp... 43 0.006
gb|AE005081.1|AE005081 Halobacterium sp. NRC-1 section 112 ... 43 0.006
emb|Z95584.1|MTCI65 Mycobacterium tuberculosis H37Rv comple... 43 0.006
gb|AE006997.1|AE006997 Mycobacterium tuberculosis CDC1551, ... 43 0.006
gb|AD000020.1|MSGY348 Mycobacterium tuberculosis sequence f... 43 0.006
emb|AL031515.1|SC5C7 Streptomyces coelicolor cosmid 5C7 42 0.012
gb|U11582.1|YSCH9433 Saccharomyces cerevisiae chromosome VI... 41 0.016
emb|Z95150.1|MTCY164 Mycobacterium tuberculosis H37Rv compl... 38 0.14
gb|AE007135.1|AE007135 Mycobacterium tuberculosis CDC1551, ... 38 0.14
gb|L81892.1|HSL81892 Homo sapiens (subclone 2_h6 from P1 H6... 38 0.18
gb|AC073641.3| Homo sapiens BAC clone RP11-368E14 from 2, c... 37 0.23
gb|AE009890.1|AE009890 Pyrobaculum aerophilum strain IM2 se... 37 0.31
gb|U72662.1|MEU72662 Methylobacterium extorquens methylotro... 35 0.89
dbj|AP003010.2|AP003010 Mesorhizobium loti DNA, complete ge... 33 5.8
gb|AY055218.1| Phaseolus vulgaris putative defense associat... 32 9.8
>ref|NM_025273.1| Mus musculus 6-pyruvoyl-tetrahydropterin synthase/dimerization
cofactor of hepatocyte nuclear factor 1 alpha (TCF1)
(Pcbd), mRNA
Length = 784
Score = 215 bits (548), Expect = 5e-55
Identities = 104/104 (100%), Positives = 104/104 (100%)
Frame = +2
Query: 1 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 60
MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL
Sbjct: 56 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 235
Query: 61 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 104
DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT
Sbjct: 236 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 367
>dbj|AK007401.1|AK007401 Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
enriched library,
clone:1810009G19:6-pyruvoyl-tetrahydropterin
synthase/dimerization cofactor of hepatocyte nuclear
factor 1 alpha (TCF1), full insert sequence
Length = 784
Score = 215 bits (548), Expect = 5e-55
Identities = 104/104 (100%), Positives = 104/104 (100%)
Frame = +2
Query: 1 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 60
MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL
Sbjct: 56 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 235
Query: 61 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 104
DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT
Sbjct: 236 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 367
>ref|NM_000281.1| Homo sapiens 6-pyruvoyl-tetrahydropterin synthase/dimerization
cofactor of hepatocyte nuclear factor 1 alpha (TCF1)
(PCBD), mRNA
Length = 624
Score = 214 bits (545), Expect = 1e-54
Identities = 103/104 (99%), Positives = 104/104 (99%)
Frame = +3
Query: 1 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 60
MAGKAHRLSAEERDQLLPNLRAVGWNE+EGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL
Sbjct: 21 MAGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 200
Query: 61 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 104
DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT
Sbjct: 201 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 332
>gb|BC006324.1|BC006324 Homo sapiens, 6-pyruvoyl-tetrahydropterin synthase/dimerization
cofactor of hepatocyte nuclear factor 1 alpha (TCF1),
clone MGC:12706 IMAGE:4138350, mRNA, complete cds
Length = 801
Score = 214 bits (545), Expect = 1e-54
Identities = 103/104 (99%), Positives = 104/104 (99%)
Frame = +1
Query: 1 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 60
MAGKAHRLSAEERDQLLPNLRAVGWNE+EGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL
Sbjct: 28 MAGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 207
Query: 61 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 104
DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT
Sbjct: 208 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 339
>gb|AF082858.1|AF082858 Homo sapiens pterin carbinolamine dehydratase (PCD) mRNA, complete
cds
Length = 829
Score = 214 bits (545), Expect = 1e-54
Identities = 103/104 (99%), Positives = 104/104 (99%)
Frame = +2
Query: 1 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 60
MAGKAHRLSAEERDQLLPNLRAVGWNE+EGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL
Sbjct: 74 MAGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 253
Query: 61 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 104
DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT
Sbjct: 254 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 385
>gb|L41559.1|HUMPCBDA Homo sapiens pterin-4a-carbinolamine dehydratase (PCBD) mRNA,
complete cds
Length = 626
Score = 214 bits (545), Expect = 1e-54
Identities = 103/104 (99%), Positives = 104/104 (99%)
Frame = +3
Query: 1 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 60
MAGKAHRLSAEERDQLLPNLRAVGWNE+EGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL
Sbjct: 21 MAGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 200
Query: 61 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 104
DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT
Sbjct: 201 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 332
>gb|M83740.1|RATHOMEOA Rat cofactor mRNA sequence
Length = 949
Score = 214 bits (545), Expect = 1e-54
Identities = 103/104 (99%), Positives = 104/104 (99%)
Frame = +1
Query: 1 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 60
MAGKAHRLSAEERDQLLPNLRAVGWNE+EGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL
Sbjct: 235 MAGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 414
Query: 61 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 104
DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT
Sbjct: 415 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 546
>gb|M83742.1|HUMHOMEOA Human cofactor mRNA
Length = 607
Score = 212 bits (540), Expect = 4e-54
Identities = 102/103 (99%), Positives = 103/103 (99%)
Frame = +2
Query: 2 AGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLD 61
AGKAHRLSAEERDQLLPNLRAVGWNE+EGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLD
Sbjct: 5 AGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLD 184
Query: 62 HHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 104
HHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT
Sbjct: 185 HHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 313
>gb|M83741.1|MUSHOMEOA Mouse cofactor mRNA
Length = 750
Score = 206 bits (525), Expect = 2e-52
Identities = 99/100 (99%), Positives = 100/100 (100%)
Frame = +3
Query: 5 AHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHP 64
+HRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHP
Sbjct: 6 SHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHP 185
Query: 65 EWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 104
EWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT
Sbjct: 186 EWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 305
>emb|AJ005157.1|GGAJ5157 Gallus gallus mRNA for dimerization cofactor of HNF1
Length = 969
Score = 206 bits (523), Expect = 4e-52
Identities = 97/104 (93%), Positives = 102/104 (97%)
Frame = +2
Query: 1 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 60
MAGKAHRL+AEER+QLLPNLRAVGWNEVEGRDAIFK+FHFKDFNRAFGFMTRVALQAEKL
Sbjct: 50 MAGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNRAFGFMTRVALQAEKL 229
Query: 61 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 104
DHHPEWFNVYNKVHITLSTHEC GLSERDINLASFIEQVA S++
Sbjct: 230 DHHPEWFNVYNKVHITLSTHECTGLSERDINLASFIEQVAASLS 361
>emb|Z37525.1|XLXDCOHMR X.laevis XDCoH mRNA
Length = 925
Score = 193 bits (490), Expect = 3e-48
Identities = 89/104 (85%), Positives = 99/104 (94%)
Frame = +2
Query: 1 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 60
MAGK HRLS EER+QLLPNLRAVGW+E++GRDAI K+FHFKDFNRAFGFMTRVALQAEKL
Sbjct: 41 MAGKVHRLSGEEREQLLPNLRAVGWHELDGRDAICKEFHFKDFNRAFGFMTRVALQAEKL 220
Query: 61 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 104
DHHPEWFNVY+KVHITLSTH+C GLSERDINLASFIEQ+A S++
Sbjct: 221 DHHPEWFNVYDKVHITLSTHDCGGLSERDINLASFIEQIAASLS 352
>dbj|AK012465.1|AK012465 Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:2700061N24:related to HEPATOCYTE
NUCLEAR FACTOR 1A DIMERIZATION COFACTOR ISOFORM, full
insert sequence
Length = 537
Score = 152 bits (383), Expect = 7e-36
Identities = 67/103 (65%), Positives = 88/103 (85%)
Frame = +1
Query: 1 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 60
M+ A L+AEERDQL+P L+A GW+E+ RDAI+K+F FK+FN+AFGFM+RVALQAEK+
Sbjct: 103 MSSDAQWLTAEERDQLIPGLKAAGWSELSERDAIYKEFSFKNFNQAFGFMSRVALQAEKM 282
Query: 61 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSM 103
+HHPEWFNVYNKV ITL++H+C GL++RD+ LA FIE+ A S+
Sbjct: 283 NHHPEWFNVYNKVQITLTSHDCGGLTKRDVKLAQFIEKAAASL 411
>ref|XM_047749.1| Homo sapiens hypothetical protein DKFZp566K1946 (DKFZP566K1946),
mRNA
Length = 5619
Score = 142 bits (357), Expect = 7e-33
Identities = 62/103 (60%), Positives = 86/103 (83%)
Frame = +3
Query: 1 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 60
M+ HRL+AEER+Q + +L+A GW+E+ RDAI+K+F F +FN+AFGFM+RVALQAEK+
Sbjct: 102 MSSGTHRLTAEERNQAILDLKAAGWSELSERDAIYKEFSFHNFNQAFGFMSRVALQAEKM 281
Query: 61 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSM 103
+HHPEWFNVYNKV ITL++H+C L+++D+ LA FIE+ A S+
Sbjct: 282 NHHPEWFNVYNKVQITLTSHDCGELTKKDVKLAKFIEKAAASV 410
>gb|AF190051.1|AF190051 Gallus gallus hepatocyte nuclear factor 1a dimerization cofactor
isoform (DCoH) mRNA, complete cds
Length = 559
Score = 141 bits (355), Expect = 1e-32
Identities = 63/103 (61%), Positives = 87/103 (84%)
Frame = +1
Query: 1 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 60
M+ ++H L+AEER Q+L +L+A GW+E RDAI+K+F+FK+FN+AFGFMTRVALQAE +
Sbjct: 16 MSSQSHWLTAEERTQVLLDLKASGWSESGERDAIYKEFNFKNFNQAFGFMTRVALQAENM 195
Query: 61 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSM 103
+HHPEWFNVY+KV ITL +H+C GL++RD+ LA FI++ A S+
Sbjct: 196 NHHPEWFNVYSKVQITLISHDCGGLTKRDVKLAQFIDKAAASV 324
>ref|NM_032151.1| Homo sapiens hypothetical protein DKFZp566K1946 (DKFZP566K1946),
mRNA
Length = 5641
Score = 140 bits (354), Expect = 1e-32
Identities = 62/103 (60%), Positives = 85/103 (82%)
Frame = +3
Query: 1 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 60
M+ HRL AEER+Q + +L+A GW+E+ RDAI+K+F F +FN+AFGFM+RVALQAEK+
Sbjct: 102 MSSGTHRLIAEERNQAILDLKAAGWSELSERDAIYKEFSFHNFNQAFGFMSRVALQAEKM 281
Query: 61 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSM 103
+HHPEWFNVYNKV ITL++H+C L+++D+ LA FIE+ A S+
Sbjct: 282 NHHPEWFNVYNKVQITLTSHDCGELTKKDVKLAKFIEKAAASV 410
>emb|AL136721.1|HSM801689 Homo sapiens mRNA; cDNA DKFZp566K1946 (from clone DKFZp566K1946);
complete cds
Length = 5641
Score = 140 bits (354), Expect = 1e-32
Identities = 62/103 (60%), Positives = 85/103 (82%)
Frame = +3
Query: 1 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKL 60
M+ HRL AEER+Q + +L+A GW+E+ RDAI+K+F F +FN+AFGFM+RVALQAEK+
Sbjct: 102 MSSGTHRLIAEERNQAILDLKAAGWSELSERDAIYKEFSFHNFNQAFGFMSRVALQAEKM 281
Query: 61 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSM 103
+HHPEWFNVYNKV ITL++H+C L+++D+ LA FIE+ A S+
Sbjct: 282 NHHPEWFNVYNKVQITLTSHDCGELTKKDVKLAKFIEKAAASV 410
>ref|NM_059581.1| Caenorhabditis elegans
Length = 537
Score = 139 bits (351), Expect = 3e-32
Identities = 63/92 (68%), Positives = 73/92 (78%)
Frame = +1
Query: 8 LSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWF 67
L+ ER + L L+ GW VEGRDAI K+FHFKDFN AFGFMTRV L+AEK+DHHPEWF
Sbjct: 250 LTESERTEQLSGLKTAGWKLVEGRDAIQKEFHFKDFNEAFGFMTRVGLKAEKMDHHPEWF 429
Query: 68 NVYNKVHITLSTHECAGLSERDINLASFIEQV 99
NVYNKV ITLSTH+C GLS D+ LA+FIE +
Sbjct: 430 NVYNKVDITLSTHDCGGLSPNDVKLATFIESI 525
>ref|NG_000696.1| Drosophila melanogaster pterin-4a-carbinolamine dehydratase (Pcd) on
chromosome 3
Length = 11001
Score = 121 bits (304), Expect = 9e-27
Identities = 58/94 (61%), Positives = 70/94 (73%)
Frame = +3
Query: 7 RLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEW 66
RL+ +ER + L L GW VEGRDAIFKQF KDFN+AF FMT VAL AEK++HHPEW
Sbjct: 5685 RLNEQERAEKLQPLLDAGWTLVEGRDAIFKQFVLKDFNQAFSFMTGVALLAEKINHHPEW 5864
Query: 67 FNVYNKVHITLSTHECAGLSERDINLASFIEQVA 100
FN YNKV +TLSTH+ GLS +DI +A+ +E A
Sbjct: 5865 FNCYNKVDVTLSTHDVGGLSSQDIRMATHLETTA 5966
>gb|AF069297.1|AF069297 Drosophila melanogaster pterin-4a-carbinolamine dehydratase gene,
complete cds
Length = 2123
Score = 121 bits (304), Expect = 9e-27
Identities = 58/94 (61%), Positives = 70/94 (73%)
Frame = +1
Query: 7 RLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEW 66
RL+ +ER + L L GW VEGRDAIFKQF KDFN+AF FMT VAL AEK++HHPEW
Sbjct: 1636 RLNEQERAEKLQPLLDAGWTLVEGRDAIFKQFVLKDFNQAFSFMTGVALLAEKINHHPEW 1815
Query: 67 FNVYNKVHITLSTHECAGLSERDINLASFIEQVA 100
FN YNKV +TLSTH+ GLS +DI +A+ +E A
Sbjct: 1816 FNCYNKVDVTLSTHDVGGLSSQDIRMATHLETTA 1917
>ref|NM_058012.1| Drosophila melanogaster pterin-4a-carbinolamine dehydratase (Pcd),
transcript variant Pcd-P1|CDS, mRNA
Length = 306
Score = 121 bits (304), Expect = 9e-27
Identities = 58/94 (61%), Positives = 70/94 (73%)
Frame = +1
Query: 7 RLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEW 66
RL+ +ER + L L GW VEGRDAIFKQF KDFN+AF FMT VAL AEK++HHPEW
Sbjct: 10 RLNEQERAEKLQPLLDAGWTLVEGRDAIFKQFVLKDFNQAFSFMTGVALLAEKINHHPEW 189
Query: 67 FNVYNKVHITLSTHECAGLSERDINLASFIEQVA 100
FN YNKV +TLSTH+ GLS +DI +A+ +E A
Sbjct: 190 FNCYNKVDVTLSTHDVGGLSSQDIRMATHLETTA 291
>gb|AE003770.1|AE003770 Drosophila melanogaster genomic scaffold 142000013386035 section 95 of
105, complete sequence
Length = 224100
Score = 121 bits (304), Expect = 9e-27
Identities = 58/94 (61%), Positives = 70/94 (73%)
Frame = +3
Query: 7 RLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEW 66
RL+ +ER + L L GW VEGRDAIFKQF KDFN+AF FMT VAL AEK++HHPEW
Sbjct: 213954 RLNEQERAEKLQPLLDAGWTLVEGRDAIFKQFVLKDFNQAFSFMTGVALLAEKINHHPEW 214133
Query: 67 FNVYNKVHITLSTHECAGLSERDINLASFIEQVA 100
FN YNKV +TLSTH+ GLS +DI +A+ +E A
Sbjct: 214134 FNCYNKVDVTLSTHDVGGLSSQDIRMATHLETTA 214235
>gb|AC007892.4|AC007892 Drosophila melanogaster, chromosome 3R, region 99B-99B, BAC clone
BACR02O03, complete sequence
Length = 202929
Score = 121 bits (304), Expect = 9e-27
Identities = 58/94 (61%), Positives = 70/94 (73%)
Frame = +3
Query: 7 RLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEW 66
RL+ +ER + L L GW VEGRDAIFKQF KDFN+AF FMT VAL AEK++HHPEW
Sbjct: 78684 RLNEQERAEKLQPLLDAGWTLVEGRDAIFKQFVLKDFNQAFSFMTGVALLAEKINHHPEW 78863
Query: 67 FNVYNKVHITLSTHECAGLSERDINLASFIEQVA 100
FN YNKV +TLSTH+ GLS +DI +A+ +E A
Sbjct: 78864 FNCYNKVDVTLSTHDVGGLSSQDIRMATHLETTA 78965
>gb|AF382144.1|AF382144 Drosophila virilis pterin 4alpha-carbinolamine dehydratase gene,
complete cds
Length = 1748
Score = 120 bits (302), Expect = 2e-26
Identities = 56/94 (59%), Positives = 73/94 (77%)
Frame = +2
Query: 7 RLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEW 66
+L+ +ER + L L GW VEGRDAI+K+F FKDFN+AF FMT VAL AEK++HHPEW
Sbjct: 1274 KLTEQERVEKLQPLLDAGWCLVEGRDAIYKEFLFKDFNQAFSFMTGVALLAEKMNHHPEW 1453
Query: 67 FNVYNKVHITLSTHECAGLSERDINLASFIEQVA 100
FNVYNK+ +TLSTH+ GLS +DI +A+++E A
Sbjct: 1454 FNVYNKLQVTLSTHDVGGLSSQDIRMATYLETQA 1555
>emb|AL646074.1|AL646074 Ralstonia solanacearum GMI1000 chromosome, complete sequence; segment
18/19
Length = 220050
Score = 112 bits (280), Expect = 6e-24
Identities = 56/93 (60%), Positives = 69/93 (73%)
Frame = +2
Query: 8 LSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWF 67
L+ E+R L L GW+ RDAI K+F F DFN AFGFMTRVAL+AE+++HHPEWF
Sbjct: 212540 LNDEQRKALFAELP--GWSLQNDRDAIHKRFTFTDFNAAFGFMTRVALKAEQVNHHPEWF 212713
Query: 68 NVYNKVHITLSTHECAGLSERDINLASFIEQVA 100
NV+N+V ITLSTH+ GL+ RD +LA FIEQ A
Sbjct: 212714 NVWNRVDITLSTHDANGLTHRDADLARFIEQAA 212812
>gb|AE009620.1|AE009620 Brucella melitensis strain 16M chromosome I, section 177 of 195 of
the complete sequence
Length = 11751
Score = 103 bits (256), Expect = 3e-21
Identities = 49/95 (51%), Positives = 67/95 (69%)
Frame = +1
Query: 6 HRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPE 65
+RL+ E ++ L L GW +V+GR+AI + F FKDF+ AFGFM + AL AEKLDHHPE
Sbjct: 2278 NRLTESEMNEALRALD--GWQKVDGREAITRSFKFKDFSTAFGFMAQAALYAEKLDHHPE 2451
Query: 66 WFNVYNKVHITLSTHECAGLSERDINLASFIEQVA 100
WFN YN+V +TL+TH G++E DI +A + +A
Sbjct: 2452 WFNAYNRVDVTLATHSENGVTELDIKMARKMNAIA 2556
>gb|AE005698.1|AE005698 Caulobacter crescentus section 24 of 359 of the complete genome
Length = 11036
Score = 100 bits (250), Expect = 2e-20
Identities = 43/70 (61%), Positives = 56/70 (79%)
Frame = +1
Query: 31 RDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDI 90
+DAI K F F DFN+AFGFMTRVAL A+KLDHHPEWFNVYN+V + L+TH+ G+++ D+
Sbjct: 1606 KDAIVKTFRFDDFNQAFGFMTRVALMADKLDHHPEWFNVYNRVEVLLTTHDADGVTDLDL 1785
Query: 91 NLASFIEQVA 100
LA F++ A
Sbjct: 1786 TLAKFMDSAA 1815
>gb|AF098993.1|CELT10B11 Caenorhabditis elegans cosmid T10B11
Length = 32314
Score = 95.5 bits (236), Expect = 7e-19
Identities = 43/62 (69%), Positives = 49/62 (78%)
Frame = +1
Query: 38 FHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIE 97
F F AFGFMTRV L+AEK+DHHPEWFNVYNKV ITLSTH+C GLS D+ LA+FIE
Sbjct: 26782 FILNSFF*AFGFMTRVGLKAEKMDHHPEWFNVYNKVDITLSTHDCGGLSPNDVKLATFIE 26961
Query: 98 QV 99
+
Sbjct: 26962 SI 26967
Score = 52.4 bits (124), Expect = 7e-06
Identities = 23/42 (54%), Positives = 28/42 (65%)
Frame = +2
Query: 8 LSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGF 49
L+ ER + L L+ GW VEGRDAI K+FHFKDFN F +
Sbjct: 26642 LTESERTEQLSGLKTAGWKLVEGRDAIQKEFHFKDFNEVFKY 26767
>emb|AJ005542.1|RNA005542 Rattus norvegicus DCoH gene
Length = 9392
Score = 95.1 bits (235), Expect = 9e-19
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = +2
Query: 2 AGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFG 48
AGKAHRLSAEERDQLLPNLRAVGWNE+EGRDAIFKQFHFKDFNR G
Sbjct: 4973 AGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRVCG 5113
Score = 66.2 bits (160), Expect = 5e-10
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +1
Query: 43 FNRAFGFMTRVALQAEKLDHHPEWFNVYNKV 73
F +AFGFMTRVALQAEKLDHHPEWFNVYNKV
Sbjct: 5488 FYQAFGFMTRVALQAEKLDHHPEWFNVYNKV 5580
Score = 65.9 bits (159), Expect = 6e-10
Identities = 32/33 (96%), Positives = 33/33 (99%)
Frame = +2
Query: 72 KVHITLSTHECAGLSERDINLASFIEQVAVSMT 104
+VHITLSTHECAGLSERDINLASFIEQVAVSMT
Sbjct: 7097 QVHITLSTHECAGLSERDINLASFIEQVAVSMT 7195
>emb|AL009227.1|SPAC27D7 S.pombe chromosome I cosmid c27D7
Length = 35892
Score = 94.7 bits (234), Expect = 1e-18
Identities = 45/97 (46%), Positives = 65/97 (66%)
Frame = +1
Query: 4 KAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHH 63
K +++ R L + W +G +FK F FK+F A+GFM+ VAL+A++L+HH
Sbjct: 12136 KVEKMNTSARLLALVSKSKNNWILQQGDTKLFKSFRFKNFIEAWGFMSCVALRAQQLNHH 12315
Query: 64 PEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVA 100
PEW NVYNKV ITL+TH+ GL+E+D+ LA FI+ +A
Sbjct: 12316 PEWTNVYNKVDITLTTHDTKGLTEKDLKLAEFIDTLA 12426
>gb|L41560.1|HUMPCBD Homo sapiens (clones HGPCD2 and HGPCD15) pterin-4a-carbinolamine
dehydratase (PCBD) gene, complete cds
Length = 12404
Score = 94.0 bits (232), Expect = 2e-18
Identities = 43/46 (93%), Positives = 45/46 (97%)
Frame = +2
Query: 2 AGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAF 47
AGKAHRLSAEERDQLLPNLRAVGWNE+EGRDAIFKQFHFKDFNR +
Sbjct: 7292 AGKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRVW 7429
Score = 66.6 bits (161), Expect = 4e-10
Identities = 34/38 (89%), Positives = 35/38 (91%)
Frame = +1
Query: 67 FNVYNKVHITLSTHECAGLSERDINLASFIEQVAVSMT 104
F V +VHITLSTHECAGLSERDINLASFIEQVAVSMT
Sbjct: 9154 FLVSFQVHITLSTHECAGLSERDINLASFIEQVAVSMT 9267
Score = 64.3 bits (155), Expect = 2e-09
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 46 AFGFMTRVALQAEKLDHHPEWFNVYNKV 73
AFGFMTRVALQAEKLDHHPEWFNVYNKV
Sbjct: 7989 AFGFMTRVALQAEKLDHHPEWFNVYNKV 8072
>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12
Length = 273785
Score = 93.6 bits (231), Expect = 3e-18
Identities = 44/77 (57%), Positives = 54/77 (69%)
Frame = -1
Query: 24 GWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECA 83
GW E +I+K F FK F AF FMT+ A AEKL+HHPEWFNVYNKV +TLSTH+
Sbjct: 120620 GWVLAEDGGSIWKTFRFKTFAEAFTFMTQCAFAAEKLNHHPEWFNVYNKVDVTLSTHDAD 120441
Query: 84 GLSERDINLASFIEQVA 100
GL+E D LA+ ++Q A
Sbjct: 120440 GLTELDFKLAAKMDQAA 120390
>gb|L15410.1|HUMCDHA Human 4a-carbinolamine dehydratase gene, partial cds
Length = 271
Score = 92.4 bits (228), Expect = 6e-18
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +2
Query: 3 GKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAF 47
GKAHRLSAEERDQLLPNLRAVGWNE+EGRDAIFKQFHFKDFNR +
Sbjct: 2 GKAHRLSAEERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRVW 136
>gb|AF168787.1|AF168787 Homo sapiens vanilloid receptor gene, partial sequence; CARKL and CTNS
genes, complete cds; TIP1 gene, partial cds; P2X5b and
P2X5a genes, complete cds; and HUMINAE gene, partial cds
Length = 200237
Score = 91.3 bits (225), Expect = 1e-17
Identities = 41/61 (67%), Positives = 52/61 (85%)
Frame = -2
Query: 43 FNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAVS 102
FN+AFGFM+RVALQAEK++HHPEWFNV NKV ITL++ C GL +RD+ LA+FIE+ A S
Sbjct: 54757 FNQAFGFMSRVALQAEKMNHHPEWFNV*NKVQITLTSRNCGGLIKRDVKLATFIEKAASS 54578
Query: 103 M 103
+
Sbjct: 54577 V 54575
Score = 37.0 bits (84), Expect = 0.31
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -1
Query: 1 MAGKAHRLSAEERDQLLPNLRAVGWNEVEGRD 32
M AHR +AEER+Q + NL+A GW+E+ R+
Sbjct: 55193 MLSGAHR*TAEERNQAILNLKAAGWSELSERE 55098
>emb|AJ005158.1|GGAJ5158 Gallus gallus DCoH gene, complete CDS
Length = 12339
Score = 90.9 bits (224), Expect = 2e-17
Identities = 41/44 (93%), Positives = 44/44 (99%)
Frame = +3
Query: 2 AGKAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNR 45
AGKAHRL+AEER+QLLPNLRAVGWNEVEGRDAIFK+FHFKDFNR
Sbjct: 4848 AGKAHRLNAEEREQLLPNLRAVGWNEVEGRDAIFKEFHFKDFNR 4979
Score = 65.5 bits (158), Expect = 8e-10
Identities = 29/34 (85%), Positives = 30/34 (87%)
Frame = +3
Query: 40 FKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKV 73
F +AFGFMTRVALQAEKLDHHPEWFNVYNKV
Sbjct: 5316 FYSTEQAFGFMTRVALQAEKLDHHPEWFNVYNKV 5417
Score = 59.7 bits (143), Expect = 4e-08
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +3
Query: 73 VHITLSTHECAGLSERDINLASFIEQVAVSMT 104
VHITLSTHEC GLSERDINLASFIEQVA S++
Sbjct: 5946 VHITLSTHECTGLSERDINLASFIEQVAASLS 6041
>gb|AC078911.11| Mus musculus Strain C57BL6/J Chromosome 2 RP23-111A22, complete
sequence
Length = 200329
Score = 56.6 bits (135), Expect(2) = 2e-15
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = -2
Query: 6 HRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVA 54
+RLSAE ++Q LPN RAVG E+EG KQFHFKDF+ FGFM R A
Sbjct: 64452 NRLSAEGQEQQLPNCRAVGRKELEG----CKQFHFKDFSGTFGFMAREA 64318
Score = 47.8 bits (112), Expect(2) = 2e-15
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = -3
Query: 58 EKLDHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVA 100
E+LDH +W NV+ K HI L++H+ LSE DINL FI +VA
Sbjct: 64325 ERLDHRLQWLNVH-KAHIPLNSHKPGSLSELDINLTGFITKVA 64200
>gb|AE008181.1|AE008181 Agrobacterium tumefaciens str. C58 circular chromosome, section 239
of 254 of the complete sequence
Length = 11754
Score = 83.6 bits (205), Expect = 3e-15
Identities = 44/97 (45%), Positives = 58/97 (59%)
Frame = -1
Query: 4 KAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHH 63
K RL + Q L L GW+ E AI + F F F AFGFM AL AEKL+HH
Sbjct: 930 KYPRLEPDAIRQALSKLE--GWSLREDGAAIVRSFKFSSFAEAFGFMAESALAAEKLNHH 757
Query: 64 PEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVA 100
PEW NVY++V + L+TH+ G++ERD LA +++ A
Sbjct: 756 PEWSNVYSRVKVCLTTHDSQGVTERDFLLAEAMQKAA 646
>dbj|D90909.1|D90909 Synechocystis sp. PCC 6803 DNA, complete genome, section:11/27,
1311235-1430418
Length = 119184
Score = 83.6 bits (205), Expect = 3e-15
Identities = 38/71 (53%), Positives = 55/71 (76%)
Frame = -3
Query: 24 GWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECA 83
GW+ ++G + + +QF F +FN+AFGFMTR+AL AE L+HHPEW NVYN+V I L+TH+
Sbjct: 82612 GWS-LQG-NKLHRQFKFANFNQAFGFMTRLALVAETLNHHPEWSNVYNRVTIDLTTHDAG 82439
Query: 84 GLSERDINLAS 94
G++E D+ A+
Sbjct: 82438 GITELDVKFAT 82406
>gb|AE009214.1|AE009214 Agrobacterium tumefaciens strain C58 circular chromosome, section 240
of 256 of the complete sequence
Length = 10359
Score = 83.6 bits (205), Expect = 3e-15
Identities = 44/97 (45%), Positives = 58/97 (59%)
Frame = -3
Query: 4 KAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHH 63
K RL + Q L L GW+ E AI + F F F AFGFM AL AEKL+HH
Sbjct: 4120 KYPRLEPDAIRQALSKLE--GWSLREDGAAIVRSFKFSSFAEAFGFMAESALAAEKLNHH 3947
Query: 64 PEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVA 100
PEW NVY++V + L+TH+ G++ERD LA +++ A
Sbjct: 3946 PEWSNVYSRVKVCLTTHDSQGVTERDFLLAEAMQKAA 3836
>dbj|AP003003.2|AP003003 Mesorhizobium loti DNA, complete genome, section 10/21
Length = 349116
Score = 79.3 bits (194), Expect = 5e-14
Identities = 38/82 (46%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +1
Query: 13 RDQLLPNLRAVG-WNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYN 71
+D + L +G W+ +I + F F++F+ AF FMTRVAL AEK+DHHP+W NVY
Sbjct: 348343 KDAITAALAELGDWSLATDGASIKRSFVFRNFSEAFAFMTRVALAAEKMDHHPDWSNVYK 348522
Query: 72 KVHITLSTHECAGLSERDINLA 93
V +TL+TH+ G++ DI LA
Sbjct: 348523 TVDVTLNTHDAGGVTALDIALA 348588
>gb|L15428.1|HUMCDHC Human 4a-carbinolamine dehydratase gene, 3' end of cds
Length = 139
Score = 65.5 bits (158), Expect = 8e-10
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +3
Query: 73 VHITLSTHECAGLSERDINLASFIEQVAVSMT 104
VHITLSTHECAGLSERDINLASFIEQVAVSMT
Sbjct: 30 VHITLSTHECAGLSERDINLASFIEQVAVSMT 125
>gb|AE006824.1|AE006824 Sulfolobus solfataricus section 183 of 272 of the complete genome
Length = 13389
Score = 63.9 bits (154), Expect = 2e-09
Identities = 30/83 (36%), Positives = 49/83 (58%)
Frame = +2
Query: 17 LPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHIT 76
L L+ GW +E I K+F FKDF ++ F+ + A+ LDHHP+ YN+V +
Sbjct: 10508 LEELKINGWIVLENGKKIKKEFRFKDFKQSVDFLKDIQPSADALDHHPDVCVYYNRVVVE 10687
Query: 77 LSTHECAGLSERDINLASFIEQV 99
L+TH+ GL++ D LA ++++
Sbjct: 10688 LTTHDVGGLTDLDYKLAIKLDEL 10756
>gb|L15427.1|HUMCDHB Human 4a-carbinolamine dehydratase gene, partial cds
Length = 285
Score = 62.8 bits (151), Expect = 5e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +1
Query: 46 AFGFMTRVALQAEKLDHHPEWFNVYNK 72
AFGFMTRVALQAEKLDHHPEWFNVYNK
Sbjct: 205 AFGFMTRVALQAEKLDHHPEWFNVYNK 285
>gb|AC008670.5| Homo sapiens chromosome 5 clone CTB-36O1, complete sequence
Length = 132755
Score = 60.5 bits (145), Expect = 3e-08
Identities = 25/29 (86%), Positives = 29/29 (99%)
Frame = -1
Query: 45 RAFGFMTRVALQAEKLDHHPEWFNVYNKV 73
+AFGFM+RVALQAEK++HHPEWFNVYNKV
Sbjct: 51218 QAFGFMSRVALQAEKMNHHPEWFNVYNKV 51132
Score = 53.5 bits (127), Expect = 3e-06
Identities = 22/40 (55%), Positives = 33/40 (82%)
Frame = -1
Query: 6 HRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNR 45
HRL+AEER+Q + +L+A GW+E+ RDAI+K+F F +FN+
Sbjct: 99908 HRLTAEERNQAILDLKAAGWSELSERDAIYKEFSFHNFNQ 99789
Score = 37.7 bits (86), Expect = 0.18
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = -2
Query: 73 VHITLSTHECAGLSERDINLASFIEQVAVSM 103
V ITL++H+C L+++D+ LA FIE+ A S+
Sbjct: 49669 VQITLTSHDCGELTKKDVKLAKFIEKAAASV 49577
>gb|AC001555.1|HSAC001555 Homo sapiens (subclone 1_d8 from BAC H75) DNA sequence, complete
sequence
Length = 4481
Score = 60.5 bits (145), Expect = 3e-08
Identities = 25/29 (86%), Positives = 29/29 (99%)
Frame = -1
Query: 45 RAFGFMTRVALQAEKLDHHPEWFNVYNKV 73
+AFGFM+RVALQAEK++HHPEWFNVYNKV
Sbjct: 2588 QAFGFMSRVALQAEKMNHHPEWFNVYNKV 2502
Score = 37.7 bits (86), Expect = 0.18
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = -2
Query: 73 VHITLSTHECAGLSERDINLASFIEQVAVSM 103
V ITL++H+C L+++D+ LA FIE+ A S+
Sbjct: 1039 VQITLTSHDCGELTKKDVKLAKFIEKAAASV 947
>dbj|AP003596.1|AP003596 Nostoc sp. PCC 7120 DNA, complete genome, section 16/19
Length = 348550
Score = 57.8 bits (138), Expect = 2e-07
Identities = 25/60 (41%), Positives = 39/60 (64%)
Frame = +2
Query: 40 FKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQV 99
FKDF A F+ ++ AE HHP+ YNKV +TL+TH+ GL+++D ++A+ I Q+
Sbjct: 300410 FKDFIEAIAFVNKLVEPAESAGHHPDIEISYNKVKVTLTTHDAGGLTQKDFDVAATISQI 300589
>gb|L04537.1|RAT4ACRDHY Rat 4a-hydroxytetrahydrobiopterin dehydratase mRNA, partial cds
Length = 76
Score = 57.0 bits (136), Expect = 3e-07
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 21 RAVGWNEVEGRDAIFKQFHFKDFNR 45
RAVGWNE+EGRDAIFKQFHFKDFNR
Sbjct: 2 RAVGWNELEGRDAIFKQFHFKDFNR 76
>dbj|AP000989.1|AP000989 Sulfolobus tokodaii genomic DNA, complete sequence, section:9/10
Length = 277050
Score = 57.0 bits (136), Expect = 3e-07
Identities = 28/76 (36%), Positives = 48/76 (62%)
Frame = -1
Query: 24 GWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECA 83
GW+ ++G + I K F F DF A F+ +V A+ ++HHP+ YNKV + L+TH+
Sbjct: 28896 GWS-LKG-NVIEKTFLFHDFKEAVNFLNKVQPIADSMNHHPDVCIYYNKVIVQLTTHDAG 28723
Query: 84 GLSERDINLASFIEQV 99
G+++ D+ LA I+++
Sbjct: 28722 GITDLDVELAKKIDEL 28675
>gb|AE000671.1|AE000671 Aquifex aeolicus section 3 of 109 of the complete genome
Length = 13276
Score = 55.5 bits (132), Expect = 8e-07
Identities = 34/93 (36%), Positives = 51/93 (54%)
Frame = +1
Query: 7 RLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEW 66
+LS EE + L NL GW +D I K+F K++ + +A AE HHP+
Sbjct: 3970 KLSEEEVKRELENLE--GWEFC--KDYIQKEFSTKNWKTTIFVVNAIASLAEAQWHHPDL 4137
Query: 67 FNVYNKVHITLSTHECAGLSERDINLASFIEQV 99
+ KV + L+THE G++ERDI LA I+++
Sbjct: 4138 EVSFKKVKVKLTTHEAGGITERDIKLAKSIDEL 4236
>gb|L81893.1|HSL81893 Homo sapiens (subclone 2_e10 from P1 H62) DNA sequence, complete
sequence
Length = 3490
Score = 53.5 bits (127), Expect = 3e-06
Identities = 22/40 (55%), Positives = 33/40 (82%)
Frame = -1
Query: 6 HRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNR 45
HRL+AEER+Q + +L+A GW+E+ RDAI+K+F F +FN+
Sbjct: 292 HRLTAEERNQAILDLKAAGWSELSERDAIYKEFSFHNFNQ 173
>gb|AC006077.1|AC006077 Homo sapiens chromosome 5, P1 clone 254f11 (LBNL H62), complete
sequence
Length = 87424
Score = 53.5 bits (127), Expect = 3e-06
Identities = 22/40 (55%), Positives = 33/40 (82%)
Frame = +1
Query: 6 HRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNR 45
HRL+AEER+Q + +L+A GW+E+ RDAI+K+F F +FN+
Sbjct: 77509 HRLTAEERNQAILDLKAAGWSELSERDAIYKEFSFHNFNQ 77628
>gb|AE004067.1|AE004067 Xylella fastidiosa 9a5c, section 213 of 229 of the complete genome
Length = 12757
Score = 52.4 bits (124), Expect = 7e-06
Identities = 28/91 (30%), Positives = 43/91 (46%)
Frame = +1
Query: 4 KAHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHH 63
K H+L +LLP + GW A+ + F F ++ R F+ +A A DHH
Sbjct: 6589 KEHKLGQARLAELLPQVP--GWELSNNGHALTRTFRFDNYYRTLAFVNALAFIAHCEDHH 6762
Query: 64 PEWFNVYNKVHITLSTHECAGLSERDINLAS 94
P+ Y + + STH+ G+SE D A+
Sbjct: 6763 PDMSVHYGRAVVCFSTHKIGGISENDFICAA 6855
>ref|NM_102721.1| Arabidopsis thaliana chromosome 1 CHR1v12152001 genomic sequence
Length = 447
Score = 47.0 bits (110), Expect = 3e-04
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +1
Query: 21 RAVGWNEVEGRDAI--FKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNV-YNKVHITL 77
+ GW+ D + + + K F + F RVA AE HHP+ V +N V I +
Sbjct: 160 KVAGWDLANDNDTLKLHRSWRVKSFTKGLDFFQRVADIAESEGHHPDLHLVGWNNVKIEI 339
Query: 78 STHECAGLSERDINLASFIEQVAV 101
TH GL+E D LA+ I ++ V
Sbjct: 340 WTHAIGGLTENDFILAAKINELQV 411
>dbj|AB047767.1|AB047767 Meloidogyne arenaria DNA, polymorphic marker for virulence,
isolate:MAMG-AV
Length = 1316
Score = 46.2 bits (108), Expect = 5e-04
Identities = 21/62 (33%), Positives = 33/62 (52%)
Frame = +3
Query: 33 AIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDINL 92
AI K +HF ++ F+ +A A DHHP+ YN+ + L+TH+ G+S D
Sbjct: 798 AIEKTYHFANYYETISFVNALAFIANAQDHHPDLSVHYNRCVVRLNTHDVHGISSTDFEC 977
Query: 93 AS 94
A+
Sbjct: 978 AT 983
>dbj|AB047765.1|AB047765 Meloidogyne incognita DNA, polymorphic marker for virulence,
isolate:MIIK-AV
Length = 1316
Score = 46.2 bits (108), Expect = 5e-04
Identities = 21/62 (33%), Positives = 33/62 (52%)
Frame = +3
Query: 33 AIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDINL 92
AI K +HF ++ F+ +A A DHHP+ YN+ + L+TH+ G+S D
Sbjct: 798 AIEKTYHFANYYETISFVNALAFIANAQDHHPDLSVHYNRCVVRLNTHDVHGISSTDFEC 977
Query: 93 AS 94
A+
Sbjct: 978 AT 983
>dbj|AB047764.1|AB047764 Meloidogyne incognita DNA, polymorphic marker for virulence,
isolate:MIGD-VI
Length = 1316
Score = 46.2 bits (108), Expect = 5e-04
Identities = 21/62 (33%), Positives = 33/62 (52%)
Frame = +3
Query: 33 AIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDINL 92
AI K +HF ++ F+ +A A DHHP+ YN+ + L+TH+ G+S D
Sbjct: 798 AIEKTYHFANYYETISFVNALAFIANAQDHHPDLSVHYNRCVVRLNTHDVHGISSTDFEC 977
Query: 93 AS 94
A+
Sbjct: 978 AT 983
>dbj|AB047763.1|AB047763 Meloidogyne arenaria DNA, polymorphic marker for virulence,
isolate:MAYG-VI
Length = 1316
Score = 46.2 bits (108), Expect = 5e-04
Identities = 21/62 (33%), Positives = 33/62 (52%)
Frame = +3
Query: 33 AIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDINL 92
AI K +HF ++ F+ +A A DHHP+ YN+ + L+TH+ G+S D
Sbjct: 798 AIEKTYHFANYYETISFVNALAFIANAQDHHPDLSVHYNRCVVRLNTHDVHGISSTDFEC 977
Query: 93 AS 94
A+
Sbjct: 978 AT 983
>dbj|AB047762.1|AB047762 Meloidogyne javanica DNA, polymorphic marker for virulence,
isolate:MJON-VI
Length = 1316
Score = 46.2 bits (108), Expect = 5e-04
Identities = 21/62 (33%), Positives = 33/62 (52%)
Frame = +3
Query: 33 AIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDINL 92
AI K +HF ++ F+ +A A DHHP+ YN+ + L+TH+ G+S D
Sbjct: 798 AIEKTYHFANYYETISFVNALAFIANAQDHHPDLSVHYNRCVVRLNTHDVHGISSTDFEC 977
Query: 93 AS 94
A+
Sbjct: 978 AT 983
>dbj|AB047766.1|AB047766 Meloidogyne javanica DNA, polymorphic marker for virulence,
isolate:MJON-AV
Length = 1330
Score = 44.3 bits (103), Expect = 0.002
Identities = 20/62 (32%), Positives = 33/62 (52%)
Frame = +3
Query: 33 AIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDINL 92
AI K +HF ++ F+ +A A DHHP+ Y++ + L+TH+ G+S D
Sbjct: 798 AIEKTYHFANYYETISFVNALAFIANAQDHHPDLSVHYSRCVVRLNTHDVHGISSTDFEC 977
Query: 93 AS 94
A+
Sbjct: 978 AT 983
>emb|AL583922.1|MLEPRTN6 Mycobacterium leprae strain TN complete genome; segment 6/10
Length = 318200
Score = 43.9 bits (102), Expect = 0.002
Identities = 29/92 (31%), Positives = 45/92 (48%)
Frame = +2
Query: 8 LSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWF 67
L+ E+ D L +L W +G A+ + F F + RVA AE DHHP+
Sbjct: 134300 LTDEQVDAALLDLN--DWKHTDG--ALCRSIKFPTFLAGIDAVCRVAEHAETKDHHPDID 134467
Query: 68 NVYNKVHITLSTHECAGLSERDINLASFIEQV 99
Y V L TH G++++DI +A I+++
Sbjct: 134468 IRYRTVTFILVTHYADGITKKDITMARDIDRL 134563
>dbj|AB047761.1|AB047761 Meloidogyne incognita DNA, polymorphic marker for virulence,
isolate:MINN-VI
Length = 1316
Score = 42.7 bits (99), Expect = 0.006
Identities = 19/62 (30%), Positives = 32/62 (50%)
Frame = +3
Query: 33 AIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDINL 92
AI K +HF ++ F+ +A A DHHP+ YN+ + +TH+ G++ D
Sbjct: 798 AIEKTYHFANYYETISFVNALAFVANAQDHHPDLSVHYNRCVVRPNTHDVHGITSTDFEC 977
Query: 93 AS 94
A+
Sbjct: 978 AT 983
>gb|AE005081.1|AE005081 Halobacterium sp. NRC-1 section 112 of 170 of the complete genome
Length = 19293
Score = 42.7 bits (99), Expect = 0.006
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = -3
Query: 32 DAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDIN 91
DAI + + F+++ F + V A++ HHPE Y++V + + HE G++ +DI
Sbjct: 6085 DAITRTYTFEEYLDGVAFASEVGDLADEAFHHPEITIRYDEVEVRFTDHEAGGVTSQDIE 5906
Query: 92 LA 93
LA
Sbjct: 5905 LA 5900
>emb|Z95584.1|MTCI65 Mycobacterium tuberculosis H37Rv complete genome; segment 50/162
Length = 34331
Score = 42.7 bits (99), Expect = 0.006
Identities = 28/90 (31%), Positives = 44/90 (48%)
Frame = -1
Query: 8 LSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWF 67
L+ E+ D L +L GW G + + F F + RVA +AE+++HHP+
Sbjct: 24758 LTDEQVDAALHDLN--GWQRAGG--VLRRSIKFPTFMAGIDAVRRVAERAEEVNHHPDID 24591
Query: 68 NVYNKVHITLSTHECAGLSERDINLASFIE 97
+ V L TH G++E DI +A I+
Sbjct: 24590 IRWRTVTFALVTHAVGGITENDIAMAHDID 24501
>gb|AE006997.1|AE006997 Mycobacterium tuberculosis CDC1551, section 83 of 280 of the
complete genome
Length = 14210
Score = 42.7 bits (99), Expect = 0.006
Identities = 28/90 (31%), Positives = 44/90 (48%)
Frame = -1
Query: 8 LSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWF 67
L+ E+ D L +L GW G + + F F + RVA +AE+++HHP+
Sbjct: 4637 LTDEQVDAALHDLN--GWQRAGG--VLRRSIKFPTFMAGIDAVRRVAERAEEVNHHPDID 4470
Query: 68 NVYNKVHITLSTHECAGLSERDINLASFIE 97
+ V L TH G++E DI +A I+
Sbjct: 4469 IRWRTVTFALVTHAVGGITENDIAMAHDID 4380
>gb|AD000020.1|MSGY348 Mycobacterium tuberculosis sequence from clone y348
Length = 40056
Score = 42.7 bits (99), Expect = 0.006
Identities = 28/90 (31%), Positives = 44/90 (48%)
Frame = -3
Query: 8 LSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWF 67
L+ E+ D L +L GW G + + F F + RVA +AE+++HHP+
Sbjct: 18079 LTDEQVDAALHDLN--GWQRAGG--VLRRSIKFPTFMAGIDAVRRVAERAEEVNHHPDID 17912
Query: 68 NVYNKVHITLSTHECAGLSERDINLASFIE 97
+ V L TH G++E DI +A I+
Sbjct: 17911 IRWRTVTFALVTHAVGGITENDIAMAHDID 17822
>emb|AL031515.1|SC5C7 Streptomyces coelicolor cosmid 5C7
Length = 41906
Score = 41.6 bits (96), Expect = 0.012
Identities = 29/97 (29%), Positives = 48/97 (48%), Gaps = 1/97 (1%)
Frame = +2
Query: 5 AHRLSAEERDQLLPNLRAVGWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHP 64
A LS +E ++ L L GW+ GR + + + A + VA E+LDHH
Sbjct: 27587 AEPLSPQEVEERLATLP--GWSLDAGR--LTRSYRLGSHFAAAAMVVHVAQVQEELDHHS 27754
Query: 65 EWFNVYNKVHITLSTHECAG-LSERDINLASFIEQVA 100
+ Y+ V + + TH G ++E+D+ LA +E +A
Sbjct: 27755 DLTLGYHTVALAVHTHSAGGAVTEKDVELARRVEDLA 27865
>gb|U11582.1|YSCH9433 Saccharomyces cerevisiae chromosome VIII cosmid 9433
Length = 29276
Score = 41.2 bits (95), Expect = 0.016
Identities = 23/78 (29%), Positives = 39/78 (49%), Gaps = 7/78 (8%)
Frame = +2
Query: 34 IFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHEC-------AGLS 86
I ++ FKD+ + F+TRV++++ HHP Y V + L TH+ + LS
Sbjct: 15254 ITREVTFKDYETTWAFLTRVSMRSHLWGHHPLIHTSYTWVKLELHTHDIDPKDGAHSQLS 15433
Query: 87 ERDINLASFIEQVAVSMT 104
+ D+ +A I+ MT
Sbjct: 15434 DIDVRMAKRIDSYIDEMT 15487
>emb|Z95150.1|MTCY164 Mycobacterium tuberculosis H37Rv complete genome; segment 135/162
Length = 39150
Score = 38.1 bits (87), Expect = 0.14
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = +2
Query: 24 GWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNK--VHITLSTHE 81
GW ++ R + + F +F+++ FM RVA A ++HHP+ V +K V +T T +
Sbjct: 21611 GWQLLDMR--LSRAFQCTNFDQSIDFMNRVASIANDINHHPD-IAVLDKRSVRVTAWTRK 21781
Query: 82 CAGLSERDINLASFIE 97
L++ D +LA+ +E
Sbjct: 21782 LGYLTDIDFDLAASVE 21829
>gb|AE007135.1|AE007135 Mycobacterium tuberculosis CDC1551, section 221 of 280 of the complete
genome
Length = 15576
Score = 38.1 bits (87), Expect = 0.14
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = +3
Query: 24 GWNEVEGRDAIFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNK--VHITLSTHE 81
GW ++ R + + F +F+++ FM RVA A ++HHP+ V +K V +T T +
Sbjct: 14448 GWQLLDMR--LSRAFQCTNFDQSIDFMNRVASIANDINHHPD-IAVLDKRSVRVTAWTRK 14618
Query: 82 CAGLSERDINLASFIE 97
L++ D +LA+ +E
Sbjct: 14619 LGYLTDIDFDLAASVE 14666
>gb|L81892.1|HSL81892 Homo sapiens (subclone 2_h6 from P1 H62) DNA sequence, complete
sequence
Length = 3294
Score = 37.7 bits (86), Expect = 0.18
Identities = 14/27 (51%), Positives = 22/27 (80%)
Frame = -1
Query: 19 NLRAVGWNEVEGRDAIFKQFHFKDFNR 45
+L+A GW+E+ RDAI+K+F F +FN+
Sbjct: 3294 DLKAAGWSELSERDAIYKEFSFHNFNQ 3214
>gb|AC073641.3| Homo sapiens BAC clone RP11-368E14 from 2, complete sequence
Length = 197709
Score = 37.4 bits (85), Expect = 0.23
Identities = 20/43 (46%), Positives = 25/43 (57%), Gaps = 1/43 (2%)
Frame = +1
Query: 59 KLDHHPEWFNVYNKVHIT-LSTHECAGLSERDINLASFIEQVA 100
K++HHPEWFNV NKV T LS +D+ L FI + A
Sbjct: 95602 KMNHHPEWFNVNNKVRPT*LSPCTLTMN*PKDVTLIQFIAKAA 95730
>gb|AE009890.1|AE009890 Pyrobaculum aerophilum strain IM2 section 145 of 201 of the complete
genome
Length = 12288
Score = 37.0 bits (84), Expect = 0.31
Identities = 22/70 (31%), Positives = 40/70 (56%), Gaps = 1/70 (1%)
Frame = +1
Query: 34 IFKQFHFKDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAG-LSERDINL 92
I + FK++ A F+ +A AE+L HHP+ Y + + L+TH+ +++RD+ L
Sbjct: 8482 IVYRIKFKNYLDAVKFLGDLAQIAERLGHHPDVELKYVNLVLKLTTHDAGNRVTDRDLAL 8661
Query: 93 ASFIEQVAVS 102
A I+++ S
Sbjct: 8662 AREIDRLVES 8691
>gb|U72662.1|MEU72662 Methylobacterium extorquens methylotrophy region containing malyl-CoA
lyase (mclA), putative ABC transporter subunit A (abcA),
putative ABC transporter subunit B (abcB), putative ABC
transporter ATP-binding subunit (abcC), methanol
dyhydrogenase large >
Length = 15807
Score = 35.4 bits (80), Expect = 0.89
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3
Query: 57 AEKLDHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQV 99
AE HHP+ Y V + L H G++E+D +LA IE+V
Sbjct: 3895 AEAAWHHPDLTASYAWVEVRLMNHAAKGITEKDFSLAKKIEEV 3767
>dbj|AP003010.2|AP003010 Mesorhizobium loti DNA, complete genome, section 17/21
Length = 340857
Score = 32.7 bits (73), Expect = 5.8
Identities = 28/101 (27%), Positives = 43/101 (41%), Gaps = 1/101 (0%)
Frame = -2
Query: 2 AGKAHRLSAEERDQLLPNLRAVGWNEVEGRD-AIFKQFHFKDFNRAFGFMTRVALQAEKL 60
AG+ HRL+ E RDQ + + + + D A+F DF + FGF R + E
Sbjct: 188054 AGRRHRLATEARDQAV--IAPTAADRTKAHDLAVF----IGDFGQEFGFKDRAGVIFEAA 187893
Query: 61 DHHPEWFNVYNKVHITLSTHECAGLSERDINLASFIEQVAV 101
H V+ +S+ GL R+ A I +V +
Sbjct: 187892 HHRA----VHGDAVFAISSRPDQGLDGREFADAFLIGRVGI 187782
>gb|AY055218.1| Phaseolus vulgaris putative defense associated acid phosphatase
mRNA, complete cds
Length = 1084
Score = 32.0 bits (71), Expect = 9.8
Identities = 18/53 (33%), Positives = 28/53 (51%)
Frame = +3
Query: 41 KDFNRAFGFMTRVALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDINLA 93
++ N FG RVA++A + W V + + L + CAG ERD++LA
Sbjct: 231 REANERFGLSWRVAVEANNVRR---WRTVPPQCYHHLQNYMCAGQYERDLSLA 380
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 19, 2002 12:00 AM
Number of letters in database: 587,334,133
Number of sequences in database: 1,164,257
Lambda K H
0.323 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 572,007,967
Number of Sequences: 1164257
Number of extensions: 7038530
Number of successful extensions: 28869
Number of sequences better than 10.0: 148
Number of HSP's better than 10.0 without gapping: 27256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28866
length of query: 104
length of database: 1,627,433,809
effective HSP length: 80
effective length of query: 24
effective length of database: 1,534,293,249
effective search space: 36823037976
effective search space used: 36823037976
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 71 (32.0 bits)