TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(304 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,164,257 sequences; 587,334,133 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
gb|M54996.1|MUSTCRGZZX Mus musculus T-cell receptor gamma-c... 593 e-168
emb|X00697.1|MMTCEL05 Murine mRNA for T-cell gamma gene 583 e-165
emb|X04397.1|MMTCRG04 Mouse non-productive mRNA for T-cell ... 347 e-159
gb|K02900.1|MUSTCGXC Mouse T-cell receptor active gamma-cha... 562 e-158
gb|K02899.1|MUSTCGXB Mouse T-cell receptor aberrantly rearr... 315 e-122
ref|NM_011558.2| Mus musculus T-cell receptor gamma, variab... 426 e-117
emb|X04699.1|MMGAMTCR M.musculus RNA for gamma chain of T-c... 426 e-117
gb|M54990.1|MUSTCRGZZY Mus musculus T-cell receptor gamma-c... 422 e-116
gb|M54998.1|MUSTCRGZZW Mus musculus T-cell receptor gamma-c... 421 e-116
emb|X03802.1|MMTCRG02 M.musculus mRNA for Tcell receptor ga... 412 e-113
emb|X04315.1|MMTCRG01 Mouse non-productive mRNA for T-cell ... 325 e-112
gb|BC003826.1|BC003826 Mus musculus, Similar to T-cell rece... 408 e-112
gb|S75435.1|S75435 TCR gamma C4L=T-cell receptor gamma cha... 393 e-108
emb|Z27087.1|RNTCRGA R.norvegicus (F344/Crj)rearranged mRNA... 393 e-108
gb|U07554.1|MMU07554 Mus musculus AKR T-cell receptor gamma... 392 e-107
emb|X03983.1|MMTCRG4P Mouse non-functional transcript for T... 347 9e-94
emb|X64803.1|MMTCRG M.musculus mRNA of rearranged TCR gamma... 343 1e-92
emb|X03984.1|MMTCRG6P Mouse non-functional transcript for T... 329 1e-90
gb|S75437.1|S75437 Rattus norvegicus T-cell receptor gamma ... 244 2e-89
emb|Z27105.1|RNTCRGB R.norvegicus (F344/Crj) rearranged mRN... 244 2e-89
gb|M30175.1|MUSTCGXM Mouse T-cell receptor beta-chain mRNA ... 308 5e-82
dbj|D55648.1|RATTCRGC Rattus sp. mRNA for T-cell receptor g... 298 4e-79
gb|M30174.1|MUSTCGXL Mouse T-cell receptor beta-chain mRNA ... 290 8e-77
gb|M18858.1|MUSTCRCGA Mouse T cell receptor C-gamma-7.1 mRN... 289 2e-76
gb|M34969.1|MUSTGVJCA Mouse (clone RAG4) T-cell receptor re... 279 2e-73
gb|M34970.1|MUSTGVJCB Mouse (clone RAG11) T-cell receptor r... 278 3e-73
gb|M34971.1|MUSTGVJCC Mouse (clone RAG42) T-cell rearranged... 278 4e-73
gb|M16768.1|HUMTCRGA Human T-cell receptor gamma chain VJCI... 277 9e-73
gb|M34972.1|MUSTGVJCD Mouse (clone RAG50) T-cell receptor r... 274 6e-72
emb|X03801.1|MMTCRG1P M.musculus mRNA for Tcell receptor ga... 243 3e-71
emb|X72500.1|HSTCRGSA H.sapiens mRNA for soluble gamma TCR 260 1e-67
gb|M16804.1|HUMTCRGB Human T-cell receptor gamma chain VJCI... 260 1e-67
dbj|D38134.1|RABTCRG Rabbit mRNA for T-cell receptor precur... 247 8e-64
emb|Y00790.1|HSTCRGR Human mRNA for T-cell receptor gamma-c... 238 5e-61
emb|X03985.1|MMTCRG7P Mouse non-functional transcript for T... 237 1e-60
emb|X06774.1|HSTRGC64 Human mRNA for T-cell rearranging gam... 235 3e-60
gb|M34973.1|MUSTGVJCE Mouse (clone RAG12) T-cell receptor r... 234 9e-60
gb|M34974.1|MUSTGVJCF Mouse (clone RAG14) T-cell receptor r... 233 2e-59
gb|AF021335.1|AF021335 Mus musculus T cell receptor gamma l... 232 3e-59
gb|M12834.1|MUSTCGGB1 Mouse T-cell receptor germline gamma ... 232 3e-59
gb|M34975.1|MUSTGVJCG Mouse (clone RAG43) T-cell receptor r... 231 4e-59
gb|M30894.1|HUMTCRGAD Human T-cell receptor Ti rearranged g... 230 1e-58
gb|M13340.1|MUSTCGXF3 Mouse T-cell receptor rearranged gamm... 224 9e-57
gb|AF037352.1|AF037352 Mus musculus T cell receptor gamma l... 224 9e-57
gb|M13231.1|HUMTCGXH Human T-cell receptor aberrantly rearr... 208 1e-56
gb|AF151103.1|AF151103 Homo sapiens TCRgamma alternate read... 221 5e-56
ref|XM_088188.1| Homo sapiens similar to T cell receptor ga... 221 5e-56
gb|M30172.1|MUSTCGXJ Mouse T-cell receptor beta-chain mRNA ... 200 2e-55
gb|M12837.1|MUSTCGGC1 Mouse T-cell receptor germline gamma ... 216 1e-54
gb|BC017861.1|BC017861 Homo sapiens, Similar to T cell rece... 216 2e-54
gb|M26764.1|MUSG2VJ Mus musculus rearranged T-cell receptor... 213 2e-53
gb|M27334.1|HUMTCRGAAD Homo sapiens (clone HGP02) T cell re... 211 8e-53
gb|M12831.1|MUSTCGGA2 Mouse T-cell receptor germline gamma ... 210 1e-52
gb|L21160.1|PIGTCRG4C Pig T-cell receptor gamma4 chain mRNA... 207 9e-52
emb|X15019.1|HSTRGGC1 Human CII mRNA for T-cell receptor ga... 205 4e-51
emb|Z13986.1|OATCCG5 O.aries rearranged T-cell receptor gamma 203 1e-50
emb|X06775.1|HSTRGC10 Human aberrant mRNA from TRG gamma ge... 203 2e-50
emb|Z22846.1|MMTCRVJAT M.musculus T cell receptor V gamma 2... 203 2e-50
gb|M77018.1|MUSTCGB M.musculus immunoglobulin rearranged T ... 201 5e-50
emb|X74774.1|HSTCRGP2 H.sapiens mRNA for TCR gamma V10 pseu... 200 1e-49
gb|M27331.1|HUMTCRGAAA Homo sapiens (clone HGP08) T cell re... 199 2e-49
gb|M26763.1|MUSG1V Mus musculus germline T-cell receptor ga... 199 2e-49
gb|M17325.1|HUMTCGCJ Homo sapiens T-cell receptor gamma-cha... 198 5e-49
emb|X06776.1|HSTRGC54 Human truncated mRNA from TRG gamma g... 197 7e-49
gb|M27332.1|HUMTCRGAAB Homo sapiens (clone HGP06) T cell re... 196 3e-48
emb|Z13003.1|OATCVG3 O.aries rearranged T-cell receptor gamma 195 3e-48
gb|M17324.1|HUMTCGCI Homo sapiens T-cell receptor gamma-cha... 194 1e-47
dbj|D90414.1|BOVBTG24 Bos taurus mRNA for T-cell receptor g... 193 1e-47
gb|M17323.1|HUMTCGCH Homo sapiens T-cell receptor gamma-cha... 191 7e-47
emb|Z48589.1|MMTCRGBV2 M.musculus mRNA for T-cell receptor ... 189 2e-46
gb|M12832.1|MUSTCGGA1 Mouse T-cell receptor germline gamma ... 180 2e-46
emb|X63684.1|BTBTGT2 B.taurus BTGT2 mRNA for T cell recepto... 188 6e-46
gb|AF159056.1|AF159056 Homo sapiens T-cell gamma receptor l... 187 9e-46
gb|M14996.1|HUMTCGCD1 Human T-cell receptor germline gamma-... 187 9e-46
gb|AC006033.2|AC006033 Homo sapiens BAC clone RP11-121A8 fr... 187 9e-46
emb|X02766.1|HSTCELG1 Human gene fragment for T-cell recept... 187 9e-46
dbj|D90417.1|BOVBTG32 Bovine mRNA for T-cell receptor gamma... 186 3e-45
dbj|D90409.1|BOVBTG2 Bovine mRNA for T-cell receptor gamma ... 186 3e-45
emb|X63683.1|BTBTGC8 B.taurus BTGC8 mRNA for T cell recepto... 184 6e-45
dbj|D90411.1|BOVBTG15 Bovine mRNA for T-cell receptor gamma... 184 1e-44
emb|Z12966.1|OATCCG3 O.aries rearranged T-cell receptor gamma 184 1e-44
emb|Z12965.1|OATCCG2 O.aries rearranged T-cell receptor gamma 181 5e-44
emb|Z49051.1|MMTCPB22B M.musculus mRNA for partial T cell r... 180 1e-43
gb|M15002.1|HUMTCGCG Human T-cell receptor germline gamma-c... 179 2e-43
gb|M15001.1|HUMTCGCF Human T-cell receptor germline gamma-c... 179 2e-43
gb|L21161.1|PIGTCRG10C Pig T-cell receptor gamma10 chain mR... 179 3e-43
gb|M77017.1|MUSTCGA M.musculus immunoglobulin rearranged T ... 176 2e-42
emb|Z22847.1|MMTCRVJAU M.musculus T cell receptor V gamma 1... 174 8e-42
emb|X63680.1|BTBTGT1 B.taurus BTGT1 mRNA for T cell recepto... 173 1e-41
dbj|D90415.1|BOVBTG25 Bos taurus mRNA for T-cell receptor g... 167 8e-40
dbj|D90410.1|BOVBTG9 Bovine mRNA for T-cell receptor gamma ... 167 8e-40
dbj|D90413.1|BOVBTG20 Bovine mRNA for T-cell receptor gamma... 166 2e-39
dbj|D90416.1|BOVBTG27 Bos taurus mRNA for T-cell receptor g... 166 2e-39
emb|X63682.1|BTBTGT4 B.taurus BTGT4 mRNA for T cell recepto... 166 2e-39
emb|Z12967.1|OATCCG4 O.aries rearranged T-cell receptor gamma 166 2e-39
gb|M14999.1|HUMTCGCE Human T-cell receptor germline gamma-c... 166 2e-39
emb|Z48588.1|MMTCRGBV1 M.musculus mRNA for T-cell receptor ... 164 7e-39
emb|Z12964.1|OATCCG1 O.aries rearranged T-cell receptor gamma 163 2e-38
emb|Z13004.1|OATCVG4 O.aries rearranged T-cell receptor gamma 160 1e-37
gb|L14603.1|PIGTCRGDCB Pig T-cell receptor gamma and delta ... 159 2e-37
dbj|D89023.1|D89023 Felis catus mRNA for TCR gamma constant... 159 4e-37
gb|AF047015.1|AF047015 Ovis aries T cell receptor gamma1 co... 158 5e-37
dbj|D90412.1|BOVBTG17 Bovine mRNA for T-cell receptor gamma... 158 6e-37
gb|AF234763.1|AF234763S1 Ovis aries T-cell receptor constan... 157 8e-37
gb|AF312559.1|AF312559S1 Ovis aries T-cell receptor constan... 157 1e-36
gb|AF312555.1|AF312555S1 Ovis aries T-cell receptor constan... 157 1e-36
gb|AF241307.1|AF241307S1 Ovis aries T cell receptor constan... 155 3e-36
dbj|D23724.1|RABTCRGC1 Rabbit mRNA for T cell receptor gamm... 155 4e-36
gb|S60780.1|S60780 TCR- gamma V-IV=T-cell receptor gamma c... 154 1e-35
gb|S60779.1|S60779 Homo sapiens nonfunctional T-cell recept... 145 4e-33
gb|L38392.1|HRSTCRG Equus caballus (clone Gorig) T cell rec... 143 2e-32
emb|Z12999.1|OATCVG21 O.aries rearranged T-cell receptor gamma 143 2e-32
gb|U07555.1|MMU07555 Mus musculus AKR T-cell receptor gamma... 140 2e-31
emb|Z13000.1|OATCVG22 O.aries rearranged T-cell receptor gamma 137 1e-30
emb|Z13007.1|OATCVG6 O.aries rearranged T-cell receptor gamma 133 2e-29
gb|AF134235.1|AF134235 Equus caballus T-cell receptor gamma... 133 2e-29
gb|U07556.1|MMU07556 Mus musculus AKR T-cell receptor gamma... 130 1e-28
dbj|D38142.1|RABTCRG8 Rabbit mRNA for T-cell receptor gamma... 128 7e-28
gb|U07558.1|MMU07558 Mus musculus BALB/c T-cell receptor ga... 127 9e-28
gb|S73842.1|S73842 TCR V gamma 3J gamma 2C gamma 2=T cell r... 120 1e-25
emb|Z12998.1|OATCVG1 O.aries rearranged T-cell receptor gamma 117 1e-24
gb|M30171.1|MUSTCGXI Mouse T-cell receptor gamma-chain mRNA... 96 4e-24
gb|U22666.1|GGU22666 Gallus gallus clone CK186 T cell recep... 115 6e-24
dbj|D38143.1|RABTCRG9 Rabbit mRNA for T-cell receptor gamma... 114 8e-24
gb|U73188.1|BTU73188 Bos taurus T cell receptor gamma chain... 113 2e-23
emb|Z13005.1|OATCVG51 O.aries rearranged T-cell receptor gamma 112 3e-23
gb|AF079123.1|AF079123 Canis familiaris clone TCRgV-J132 T ... 111 7e-23
gb|M26765.1|MUSG3VJ Mus musculus rearranged T-cell receptor... 87 1e-21
emb|X86472.1|BATRGC31 B.acutorostrata TRGC gene, Tgamma 31 ... 107 1e-21
emb|Z12299.1|MMTCRGV4M M.musculus rearranged T-cell recepto... 107 2e-21
gb|M13336.1|MUSTCGXF2 Mouse T-cell receptor rearranged gamm... 107 2e-21
emb|X86471.1|BATRGC117 B.acutorostrata TRGC gene, Tgamma 11... 107 2e-21
gb|U78284.1|U78284 Gallus gallus clone 10f1 T-cell receptor... 104 1e-20
gb|AF440688.1|AF440688 Aotus nancymaae T cell receptor mRNA... 102 5e-20
emb|Z22841.1|MMTCRVJAM M.musculus T cell receptor V gamma 4... 96 6e-20
gb|M27333.1|HUMTCRGAAC Homo sapiens (clone HGP03) T cell re... 101 9e-20
gb|AF378702.1|AF378702 Anas platyrhynchos T-cell receptor g... 100 2e-19
gb|U78261.1|U78261 Gallus gallus clone 9a1 T-cell receptor ... 99 3e-19
emb|X86723.1|PTTRGC P.troglodytes mRNA for TcR gamma consta... 98 1e-18
emb|X74775.1|HSTCRGP H.sapiens mRNA for TCR gamma V11 pseud... 97 2e-18
emb|X02758.1|HSTRGG1D H.sapiens gene for T-cell receptor ga... 96 3e-18
emb|X02757.1|HSTRGG1R H.sapiens gene for T-cell receptor ga... 96 4e-18
emb|Y11227.1|HSTRGV11G H.sapiens TRGV11 gene 95 8e-18
gb|U78285.1|U78285 Gallus gallus clone 18a3 T-cell receptor... 94 1e-17
emb|Z48590.1|MMTCRGBV4 M.musculus mRNA for T-cell receptor ... 94 1e-17
gb|M27335.1|HUMTCRGAAE Human (clone HGP02) T cell receptor ... 94 2e-17
gb|AF079122.1|AF079122 Canis familiaris clone TCRgV-J131 T ... 77 2e-17
gb|U73186.1|BTU73186 Bos taurus T cell receptor gamma chain... 93 3e-17
gb|U78260.1|U78260 Gallus gallus clone 5d1 T-cell receptor ... 92 4e-17
gb|U73187.1|BTU73187 Bos taurus T cell receptor gamma chain... 91 1e-16
emb|X07207.1|HSTRGV11 Human non-productive rearranged V11 g... 91 1e-16
gb|M94349.1|MUSLIG Mus musculus immunoglobulin lambda chain... 90 2e-16
gb|U78259.1|U78259 Gallus gallus T-cell receptor gamma Vg2-... 89 4e-16
gb|AF333728.1| Aotus nancymaae clone 11192.6 T-cell recepto... 89 4e-16
gb|AF333716.1| Aotus nancymaae clone 11190.4 T-cell recepto... 89 5e-16
gb|M94351.1|MUSCSIGLA Mus musculus immunoglobulin lambda ch... 89 6e-16
gb|AF333717.1| Aotus nancymaae clone 11190.5 T-cell recepto... 88 8e-16
gb|AF333713.1| Aotus nancymaae clone 11190.1 T-cell recepto... 88 8e-16
emb|X57820.1|HSIGVL030 Human rearranged immunoglobulin lamb... 88 8e-16
emb|Z13001.1|OATCVG23 O.aries rearranged T-cell receptor gamma 88 8e-16
emb|Z11172.1|HSN1B12 H.sapiens gamma-delta T-cell Vgamma9+ ... 88 8e-16
gb|L15321.1|MUSTCRGVX Mouse T cell receptor gamma V1 and V2... 85 1e-15
gb|AF333725.1| Aotus nancymaae clone 11192.18 T-cell recept... 88 1e-15
gb|AF333722.1| Aotus nancymaae clone 11192.17 T-cell recept... 88 1e-15
gb|AF333719.1| Aotus nancymaae clone 11190.8 T-cell recepto... 88 1e-15
gb|AF333715.1| Aotus nancymaae clone 11190.3 T-cell recepto... 88 1e-15
gb|L22290.1|RABTCRGAM Rabbit T-cell receptor gamma mRNA, pa... 88 1e-15
emb|X02422.1|HSIGLBV Human mRNA for Ig lambda L-chain V(VI)... 88 1e-15
emb|X57815.1|HSIGVL025 Human rearranged immunoglobulin lamb... 87 1e-15
gb|AF333720.1| Aotus nancymaae clone 11190.10 T-cell recept... 87 1e-15
gb|AF333718.1| Aotus nancymaae clone 11190.6 T-cell recepto... 87 1e-15
gb|AF333714.1| Aotus nancymaae clone 11190.2 T-cell recepto... 87 2e-15
emb|X86720.1|GGTRGV10 G.gorilla TRGV10 gene 87 2e-15
gb|AF321283.1|AF321283 Trichosurus vulpecula clone L5 immun... 87 2e-15
emb|X05503.1|HSTRG10R Human rearranged TRGV10-J2 gene for T... 87 2e-15
emb|X86718.1|PPTRGV10 P.paniscus TRGV10 gene 87 2e-15
emb|X74798.1|HSTRGV H.sapiens TRGV10 gene, allele V10*A2 87 2e-15
emb|X07206.1|HSTRGV10 H.sapiens TRGV10 gene, allele V10*A1 87 2e-15
emb|X86558.1|PTTRGV10 P.troglodytes TRGV10 gene 87 2e-15
gb|AF321280.1|AF321280 Trichosurus vulpecula clone L1 immun... 87 2e-15
gb|AF191795.1|AF191795 Homo sapiens immunoglobulin lambda l... 86 3e-15
gb|AF333731.1| Aotus nancymaae clone 11192.24 T-cell recept... 86 3e-15
gb|AF333729.1| Aotus nancymaae clone 11192.5 T-cell recepto... 86 4e-15
gb|AF333726.1| Aotus nancymaae clone 11192.20 T-cell recept... 86 4e-15
gb|AF333724.1| Aotus nancymaae clone 11192.16 T-cell recept... 86 5e-15
gb|AF321281.1|AF321281 Trichosurus vulpecula clone L10 immu... 86 5e-15
gb|AF333727.1| Aotus nancymaae clone 11192.2 T-cell recepto... 86 5e-15
emb|Z11276.1|HSN3TB13 H.sapiens gamma-delta T-cell Vgamma9+... 85 7e-15
gb|AF018265.1|AF018265 Synthetic construct RSV neutralizing... 85 7e-15
gb|AF333721.1| Aotus nancymaae clone 11192.10 T-cell recept... 85 9e-15
gb|AF333723.1| Aotus nancymaae clone 11192.15 T-cell recept... 85 9e-15
emb|Z11217.1|HSN2B5 H.sapiens gamma-delta T-cell Vgamma9+ mRNA 85 9e-15
gb|L76575.1|XELIGL01 Xenopus laevis immunoglobulin light ch... 84 1e-14
gb|AF333732.1| Aotus nancymaae clone 11192.22 T-cell recept... 84 1e-14
gb|S60175.1|S60175 TCR V3-JP2-C gamma 2=T cell receptor gam... 84 1e-14
emb|X57817.1|HSIGVL027 Human rearranged immunoglobulin lamb... 84 2e-14
gb|AF378744.1|AF378744 Aotus nancymaae clone Y9-9 T-cell re... 84 2e-14
gb|AF378742.1|AF378742 Aotus nancymaae clone S1-9 T-cell re... 84 2e-14
emb|Z11307.1|HSS1B78 H.sapiens gamma-delta T-cell Vgamma9+ ... 84 2e-14
emb|Z11207.1|HSN2B12 H.sapiens gamma-delta T-cell Vgamma9+ ... 84 2e-14
emb|Z11187.1|HSN1B28 H.sapiens gamma-delta T-cell Vgamma9+ ... 84 2e-14
emb|X57812.1|HSIGVL022 Human rearranged immunoglobulin lamb... 83 3e-14
gb|L38567.1|HSL38567 Human clone tat16Fab, immunoglobulin l... 83 3e-14
emb|X86719.1|HLTRGV10 H.lar TRGV10 gene 83 3e-14
emb|X57822.1|HSIGVL032 Human rearranged immunoglobulin lamb... 83 3e-14
gb|AF333730.1| Aotus nancymaae clone 11192.25 T-cell recept... 83 3e-14
gb|AF378741.1|AF378741 Aotus nancymaae clone S1-7 T-cell re... 83 3e-14
emb|Z11403.1|HSN1B13B H.sapiens gamma-delta T-cell Vgamma9+... 83 3e-14
gb|AF378743.1|AF378743 Aotus nancymaae clone Y9-5 T-cell re... 82 4e-14
emb|Z11361.1|HSS2TB6 H.sapiens gamma-delta T-cell Vgamma9+ ... 82 4e-14
emb|Z11302.1|HSS1B28 H.sapiens gamma-delta T-cell Vgamma9+ ... 82 4e-14
emb|Z11374.1|HSS3B43 H.sapiens gamma-delta T-cell Vgamma9+ ... 82 4e-14
emb|Z11310.1|HSS1PHA10 H.sapiens gamma-delta T-cell Vgamma9... 82 4e-14
emb|Z11300.1|HSS1B26 H.sapiens gamma-delta T-cell Vgamma9+ ... 82 4e-14
emb|Z11198.1|HSN1TB12 H.sapiens gamma-delta T-cell Vgamma9+... 82 4e-14
emb|Z11178.1|HSN1B19 H.sapiens gamma-delta T-cell Vgamma9+ ... 82 4e-14
emb|Z11176.1|HSN1B17 H.sapiens gamma-delta T-cell Vgamma9+ ... 82 4e-14
emb|Z11343.1|HSS2B19 H.sapiens gamma-delta T-cell Vgamma9+ ... 82 6e-14
emb|Z11345.1|HSS2B46 H.sapiens gamma-delta T-cell Vgamma9+ ... 82 6e-14
emb|Z11170.1|HSN1B10 H.sapiens gamma-delta T-cell Vgamma9+ ... 82 6e-14
dbj|D01059.1|HUMIGLYM1 Homo sapiens mRNA for immunoglobulin... 82 7e-14
emb|Z11235.1|HSN2TB6 H.sapiens gamma-delta T-cell Vgamma9+ ... 82 7e-14
emb|Z11180.1|HSN1B21 H.sapiens gamma-delta T-cell Vgamma9+ ... 82 7e-14
emb|X14583.1|HSIGLV Human mRNA for Ig lambda-chain 82 7e-14
emb|Z11273.1|HSN3TB10 H.sapiens gamma-delta T-cell Vgamma9+... 82 7e-14
emb|Z11209.1|HSN2B14 H.sapiens gamma-delta T-cell Vgamma9+ ... 82 7e-14
emb|Z11206.1|HSN2B11 H.sapiens gamma-delta T-cell Vgamma9+ ... 82 7e-14
emb|Z11314.1|HSS1PHA14 H.sapiens gamma-delta T-cell Vgamma9... 82 7e-14
emb|AJ133189.1|ARU133189 Acipenser ruthenus mRNA for immuno... 81 1e-13
emb|Z11398.1|HSS3TB22 H.sapiens gamma-delta T-cell Vgamma9+... 81 1e-13
gb|BC022823.1| Homo sapiens, clone MGC:39283 IMAGE:4856249,... 81 1e-13
emb|X57810.1|HSIGVL011 Human rearranged immunoglobulin lamb... 81 1e-13
emb|Z11385.1|HSS3PHA3 H.sapiens gamma-delta T-cell Vgamma9+... 81 1e-13
emb|Z11363.1|HSS2TB8 H.sapiens gamma-delta T-cell Vgamma9+ ... 81 1e-13
emb|Z11339.1|HSS2B15 H.sapiens gamma-delta T-cell Vgamma9+ ... 81 1e-13
emb|Z11190.1|HSN1B31 H.sapiens gamma-delta T-cell Vgamma9+ ... 81 1e-13
emb|Z11182.1|HSN1B23 H.sapiens gamma-delta T-cell Vgamma9+ ... 81 1e-13
emb|X86722.1|PPATRGV10 P.pygmaeus ssp. alelei TRGV10 gene 81 1e-13
emb|Z11293.1|HSS1B19 H.sapiens gamma-delta T-cell Vgamma9+ ... 81 1e-13
emb|X57819.1|HSIGVL029 Human rearranged immunoglobulin lamb... 81 1e-13
emb|Z11372.1|HSS3B41 H.sapiens gamma-delta T-cell Vgamma9+ ... 81 1e-13
emb|Z11349.1|HSS2TB10 H.sapiens gamma-delta T-cell Vgamma9+... 81 1e-13
emb|Z11333.1|HSS1TB20 H.sapiens gamma-delta T-cell Vgamma9+... 81 1e-13
emb|Z11294.1|HSS1B20 H.sapiens gamma-delta T-cell Vgamma9+ ... 81 1e-13
emb|Z11285.1|HSS1B10 H.sapiens gamma-delta T-cell Vgamma9+ ... 81 1e-13
emb|Z11275.1|HSN3TB12 H.sapiens gamma-delta T-cell Vgamma9+... 81 1e-13
emb|Z11269.1|HSN3PHA7 H.sapiens gamma-delta T-cell Vgamma9+... 81 1e-13
emb|Z11252.1|HSN3B8 H.sapiens gamma-delta T-cell Vgamma9+ mRNA 81 1e-13
emb|Z11221.1|HSN2B9 H.sapiens gamma-delta T-cell Vgamma9+ mRNA 81 1e-13
emb|Z11192.1|HSN1B4 H.sapiens gamma-delta T-cell Vgamma9+ mRNA 81 1e-13
emb|Z11188.1|HSN1B29 H.sapiens gamma-delta T-cell Vgamma9+ ... 81 1e-13
emb|Z11186.1|HSN1B27 H.sapiens gamma-delta T-cell Vgamma9+ ... 81 1e-13
emb|Z11324.1|HSS1PHA8 H.sapiens gamma-delta T-cell Vgamma9+... 81 1e-13
emb|X57804.1|HSIGVL004 Human rearranged immunoglobulin lamb... 80 2e-13
emb|X86721.1|PPPTRGV10 P.pygmaeus ssp. pygmaeus TRGV10 gene 80 2e-13
emb|Z11397.1|HSS3TB21 H.sapiens gamma-delta T-cell Vgamma9+... 80 2e-13
emb|Z11373.1|HSS3B42 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11319.1|HSS1PHA3 H.sapiens gamma-delta T-cell Vgamma9+... 80 2e-13
emb|Z11299.1|HSS1B25 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11280.1|HSN3TB18 H.sapiens gamma-delta T-cell Vgamma9+... 80 2e-13
emb|Z11251.1|HSN3B67 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11248.1|HSN3B19 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11298.1|HSS1B24 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11394.1|HSS3TB15 H.sapiens gamma-delta T-cell Vgamma9+... 80 2e-13
emb|Z11367.1|HSS3B35 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11360.1|HSS2TB5 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11354.1|HSS2TB16 H.sapiens gamma-delta T-cell Vgamma9+... 80 2e-13
emb|Z11348.1|HSS2TB12 H.sapiens gamma-delta T-cell Vgamma9+... 80 2e-13
emb|Z11335.1|HSS2B13 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11336.1|HSS2B11 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11334.1|HSS1TB810 H.sapiens gamma-delta T-cell Vgamma9... 80 2e-13
emb|Z11326.1|HSS1TB17 H.sapiens gamma-delta T-cell Vgamma9+... 80 2e-13
emb|Z11321.1|HSS1PHA5 H.sapiens gamma-delta T-cell Vgamma9+... 80 2e-13
emb|Z11303.1|HSS1B29 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11301.1|HSS1B27 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11297.1|HSS1B23 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11296.1|HSS1B22 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11284.1|HSS1B16 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11283.1|HSN3TB9 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11282.1|HSN3TB78 H.sapiens gamma-delta T-cell Vgamma9+... 80 2e-13
emb|Z11279.1|HSN3TB17 H.sapiens gamma-delta T-cell Vgamma9+... 80 2e-13
emb|Z11272.1|HSN3TB14 H.sapiens gamma-delta T-cell Vgamma9+... 80 2e-13
emb|Z11257.1|HSN3PHA12 H.sapiens gamma-delta T-cell Vgamma9... 80 2e-13
emb|Z11239.1|HSN3B13 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11224.1|HSN2TB11 H.sapiens gamma-delta T-cell Vgamma9+... 80 2e-13
emb|Z11211.1|HSN2B16 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11202.1|HSN1TB7 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11177.1|HSN1B18 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|Z11169.1|HSN1B13 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 2e-13
emb|AJ236869.1|ARU236869 Acipenser ruthenus mRNA for immuno... 80 2e-13
emb|Z11193.1|HSN1B5 H.sapiens gamma-delta T-cell Vgamma9+ mRNA 80 3e-13
emb|Z11315.1|HSS1PHA15 H.sapiens gamma-delta T-cell Vgamma9... 80 3e-13
emb|Z11401.1|HSS3TB25 H.sapiens gamma-delta T-cell Vgamma9+... 80 3e-13
emb|Z11396.1|HSS3TB20 H.sapiens gamma-delta T-cell Vgamma9+... 80 3e-13
emb|Z11392.1|HSS3TB19 H.sapiens gamma-delta T-cell Vgamma9+... 80 3e-13
emb|Z11388.1|HSS3PHA6 H.sapiens gamma-delta T-cell Vgamma9+... 80 3e-13
emb|Z11384.1|HSS3PHA2 H.sapiens gamma-delta T-cell Vgamma9+... 80 3e-13
emb|Z11382.1|HSS3PHA14 H.sapiens gamma-delta T-cell Vgamma9... 80 3e-13
emb|Z11378.1|HSS3PHA10 H.sapiens gamma-delta T-cell Vgamma9... 80 3e-13
emb|Z11313.1|HSS1PHA13 H.sapiens gamma-delta T-cell Vgamma9... 80 3e-13
emb|Z11312.1|HSS1PHA12 H.sapiens gamma-delta T-cell Vgamma9... 80 3e-13
emb|Z11277.1|HSN3TB15 H.sapiens gamma-delta T-cell Vgamma9+... 80 3e-13
emb|Z11247.1|HSN3B18 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 3e-13
emb|Z11246.1|HSN3B17 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 3e-13
emb|Z11245.1|HSN3B16 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 3e-13
emb|Z11227.1|HSN2TB14 H.sapiens gamma-delta T-cell Vgamma9+... 80 3e-13
emb|Z11226.1|HSN2TB13 H.sapiens gamma-delta T-cell Vgamma9+... 80 3e-13
emb|Z11203.1|HSN1TB8 H.sapiens gamma-delta T-cell Vgamma9+ ... 80 3e-13
gb|AF321282.1|AF321282 Trichosurus vulpecula clone L11 immu... 79 4e-13
gb|AF043184.1|AF043184 Homo sapiens T cell receptor beta ch... 79 4e-13
emb|Z11375.1|HSS3B44 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 4e-13
emb|Z11368.1|HSS3B37 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 4e-13
emb|Z11364.1|HSS2TB9 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 4e-13
emb|Z11353.1|HSS2TB15 H.sapiens gamma-delta T-cell Vgamma9+... 79 4e-13
emb|Z11351.1|HSS2TB13 H.sapiens gamma-delta T-cell Vgamma9+... 79 4e-13
emb|Z11346.1|HSS2B78 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 4e-13
emb|Z11344.1|HSS2B20 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 4e-13
emb|Z11332.1|HSS1TB19 H.sapiens gamma-delta T-cell Vgamma9+... 79 4e-13
emb|Z11331.1|HSS1TB18 H.sapiens gamma-delta T-cell Vgamma9+... 79 4e-13
emb|Z11316.1|HSS1PHA16 H.sapiens gamma-delta T-cell Vgamma9... 79 4e-13
emb|Z11304.1|HSS1B30 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 4e-13
emb|Z11250.1|HSN3B45 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 4e-13
emb|Z11249.1|HSN3B20 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 4e-13
emb|Z11242.1|HSN3B12 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 4e-13
emb|Z11241.1|HSN3B11 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 4e-13
emb|Z11238.1|HSN2TB9 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 4e-13
emb|Z11377.1|HSS3PHA1 H.sapiens gamma-delta T-cell Vgamma9+... 79 4e-13
emb|Z11356.1|HSS2TB18 H.sapiens gamma-delta T-cell Vgamma9+... 79 4e-13
emb|X57809.1|HSIGVL009 Human rearranged immunoglobulin lamb... 79 4e-13
emb|Z11199.1|HSN1TB34 H.sapiens gamma-delta T-cell Vgamma9+... 79 4e-13
emb|Z11185.1|HSN1B26 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 4e-13
emb|Z11395.1|HSS3TB17 H.sapiens gamma-delta T-cell Vgamma9+... 79 4e-13
emb|Z11195.1|HSN1B7 H.sapiens gamma-delta T-cell Vgamma9+ mRNA 79 5e-13
emb|X62917.1|BTIGLCXX B.taurus mRNA for immunoglobulin ligh... 79 5e-13
emb|Z11402.1|HSS3TB26 H.sapiens gamma-delta T-cell Vgamma9+... 79 5e-13
emb|Z11337.1|HSS2B12 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 5e-13
emb|Z11286.1|HSS1B11 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 5e-13
emb|Z11210.1|HSN2B15 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 5e-13
emb|Z11201.1|HSN1TB6 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 5e-13
emb|Z11174.1|HSN1B15 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 5e-13
gb|L25552.1|HDLIGCVD Hydrolagus colliei immunoglobulin ligh... 79 5e-13
emb|Z11216.1|HSN2B4 H.sapiens gamma-delta T-cell Vgamma9+ mRNA 79 5e-13
emb|Z11362.1|HSS2TB7 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 5e-13
emb|Z11359.1|HSS2TB34 H.sapiens gamma-delta T-cell Vgamma9+... 79 5e-13
emb|Z11341.1|HSS2B17 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 5e-13
emb|Z11291.1|HSS1B17 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 5e-13
gb|BC020233.1|BC020233 Homo sapiens, clone MGC:31936 IMAGE:... 79 6e-13
emb|Z11194.1|HSN1B6 H.sapiens gamma-delta T-cell Vgamma9+ mRNA 79 6e-13
emb|Z11208.1|HSN2B13 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 6e-13
dbj|D89024.1|D89024 Felis catus mRNA for TCR gamma constant... 79 6e-13
dbj|D38144.1|RABTCRG10 Rabbit mRNA for T-cell receptor gamm... 79 6e-13
gb|S77011.1|S77011 {pseudogene} Ig V lambda IJ psi C lambda... 79 6e-13
emb|Z11393.1|HSS3TB10 H.sapiens gamma-delta T-cell Vgamma9+... 79 6e-13
emb|Z11376.1|HSS3B45 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 6e-13
emb|Z11366.1|HSS3B3234 H.sapiens gamma-delta T-cell Vgamma9... 79 6e-13
emb|Z11352.1|HSS2TB14 H.sapiens gamma-delta T-cell Vgamma9+... 79 6e-13
emb|Z11322.1|HSS1PHA6 H.sapiens gamma-delta T-cell Vgamma9+... 79 6e-13
emb|Z11266.1|HSN3PHA4 H.sapiens gamma-delta T-cell Vgamma9+... 79 6e-13
emb|Z11189.1|HSN1B30 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 6e-13
emb|Z11369.1|HSS3B38 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 6e-13
emb|Z11305.1|HSS1B31 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 6e-13
emb|Z11405.1|HSN3TB14B H.sapiens gamma-delta T-cell Vgamma9... 79 6e-13
emb|Z11231.1|HSN2TB2 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 6e-13
emb|Z11181.1|HSN1B22 H.sapiens gamma-delta T-cell Vgamma9+ ... 79 6e-13
emb|Z11365.1|HSS3B131 H.sapiens gamma-delta T-cell Vgamma9+... 78 8e-13
emb|Z11330.1|HSS1TB16 H.sapiens gamma-delta T-cell Vgamma9+... 78 8e-13
emb|Z11175.1|HSN1B16 H.sapiens gamma-delta T-cell Vgamma9+ ... 78 8e-13
emb|X57811.1|HSIGVL021 Human rearranged immunoglobulin lamb... 78 8e-13
dbj|D38138.1|RABTCRG4 Rabbit mRNA for T-cell receptor gamma... 78 8e-13
emb|Z11243.1|HSN3B14 H.sapiens gamma-delta T-cell Vgamma9+ ... 78 8e-13
emb|Z11370.1|HSS3B39 H.sapiens gamma-delta T-cell Vgamma9+ ... 78 8e-13
emb|Z11320.1|HSS1PHA4 H.sapiens gamma-delta T-cell Vgamma9+... 78 8e-13
emb|Z11220.1|HSN2B8 H.sapiens gamma-delta T-cell Vgamma9+ mRNA 78 8e-13
gb|AF396698.1|AF396698 Bos taurus immunoglobulin lambda lig... 78 8e-13
emb|Z11381.1|HSS3PHA13 H.sapiens gamma-delta T-cell Vgamma9... 78 8e-13
emb|Z11325.1|HSS1PHA9 H.sapiens gamma-delta T-cell Vgamma9+... 78 1e-12
emb|Z11240.1|HSN3B10 H.sapiens gamma-delta T-cell Vgamma9+ ... 78 1e-12
emb|Z11355.1|HSS2TB17 H.sapiens gamma-delta T-cell Vgamma9+... 78 1e-12
emb|Z11258.1|HSN3PHA13 H.sapiens gamma-delta T-cell Vgamma9... 78 1e-12
emb|X57806.1|HSIGVL006 Human rearranged immunoglobulin lamb... 78 1e-12
emb|Z11400.1|HSS3TB24 H.sapiens gamma-delta T-cell Vgamma9+... 78 1e-12
emb|Z11399.1|HSS3TB23 H.sapiens gamma-delta T-cell Vgamma9+... 78 1e-12
emb|Z11390.1|HSS3PHA8 H.sapiens gamma-delta T-cell Vgamma9+... 78 1e-12
emb|Z11371.1|HSS3B40 H.sapiens gamma-delta T-cell Vgamma9+ ... 78 1e-12
emb|Z11347.1|HSS2B910 H.sapiens gamma-delta T-cell Vgamma9+... 78 1e-12
emb|Z11407.1|HSS1TB17B H.sapiens gamma-delta T-cell Vgamma9... 78 1e-12
emb|Z11287.1|HSS1B12 H.sapiens gamma-delta T-cell Vgamma9+ ... 78 1e-12
emb|Z11281.1|HSN3TB56 H.sapiens gamma-delta T-cell Vgamma9+... 78 1e-12
emb|Z11278.1|HSN3TB16 H.sapiens gamma-delta T-cell Vgamma9+... 78 1e-12
emb|Z11274.1|HSN3TB11 H.sapiens gamma-delta T-cell Vgamma9+... 78 1e-12
emb|Z11253.1|HSN3B9 H.sapiens gamma-delta T-cell Vgamma9+ mRNA 78 1e-12
emb|Z11225.1|HSN2TB12 H.sapiens gamma-delta T-cell Vgamma9+... 78 1e-12
emb|Z11204.1|HSN2B1 H.sapiens gamma-delta T-cell Vgamma9+ mRNA 78 1e-12
emb|Z11184.1|HSN1B25 H.sapiens gamma-delta T-cell Vgamma9+ ... 78 1e-12
gb|BC002129.1|BC002129 Mus musculus, clone MGC:6743 IMAGE:3... 77 1e-12
emb|Z11308.1|HSS1B9 H.sapiens gamma-delta T-cell Vgamma9+ mRNA 77 1e-12
emb|Z11236.1|HSN2TB7 H.sapiens gamma-delta T-cell Vgamma9+ ... 77 1e-12
emb|Z11233.1|HSN2TB4 H.sapiens gamma-delta T-cell Vgamma9+ ... 77 1e-12
emb|Z11223.1|HSN2TB10 H.sapiens gamma-delta T-cell Vgamma9+... 77 1e-12
gb|L21162.1|PIGTCRG15C Pig T-cell receptor gamma15 chain mR... 77 1e-12
emb|Z11340.1|HSS2B16 H.sapiens gamma-delta T-cell Vgamma9+ ... 77 1e-12
emb|Z11311.1|HSS1PHA11 H.sapiens gamma-delta T-cell Vgamma9... 77 1e-12
emb|Z11290.1|HSS1B15 H.sapiens gamma-delta T-cell Vgamma9+ ... 77 1e-12
emb|Z11271.1|HSN3PHA9 H.sapiens gamma-delta T-cell Vgamma9+... 77 1e-12
emb|Z11318.1|HSS1PHA18 H.sapiens gamma-delta T-cell Vgamma9... 77 1e-12
emb|Z11317.1|HSS1PHA17 H.sapiens gamma-delta T-cell Vgamma9... 77 1e-12
emb|Z11404.1|HSN3B13B H.sapiens gamma-delta T-cell Vgamma9+... 77 1e-12
emb|Z11219.1|HSN2B7 H.sapiens gamma-delta T-cell Vgamma9+ mRNA 77 1e-12
emb|Z11215.1|HSN2B3 H.sapiens gamma-delta T-cell Vgamma9+ mRNA 77 1e-12
emb|Z11267.1|HSN3PHA5 H.sapiens gamma-delta T-cell Vgamma9+... 77 1e-12
emb|Z11264.1|HSN3PHA2 H.sapiens gamma-delta T-cell Vgamma9+... 77 1e-12
emb|Z11410.1|HSS3TB19B H.sapiens gamma-delta T-cell Vgamma9... 77 1e-12
emb|Z11409.1|HSS2TB12B H.sapiens gamma-delta T-cell Vgamma9... 77 1e-12
emb|Z11350.1|HSS2TB11 H.sapiens gamma-delta T-cell Vgamma9+... 77 1e-12
emb|Z11328.1|HSS1TB13 H.sapiens gamma-delta T-cell Vgamma9+... 77 1e-12
emb|Z11327.1|HSS1TB11 H.sapiens gamma-delta T-cell Vgamma9+... 77 1e-12
emb|Z11288.1|HSS1B13 H.sapiens gamma-delta T-cell Vgamma9+ ... 77 1e-12
emb|Z11183.1|HSN1B24 H.sapiens gamma-delta T-cell Vgamma9+ ... 77 1e-12
emb|Z11179.1|HSN1B20 H.sapiens gamma-delta T-cell Vgamma9+ ... 77 1e-12
gb|U75411.1|RNU75411 Rattus norvegicus anti-idiotype immuno... 77 2e-12
emb|Z11255.1|HSN3PHA10 H.sapiens gamma-delta T-cell Vgamma9... 77 2e-12
emb|Z11387.1|HSS3PHA5 H.sapiens gamma-delta T-cell Vgamma9+... 77 2e-12
emb|Z11309.1|HSS1PHA1 H.sapiens gamma-delta T-cell Vgamma9+... 77 2e-12
emb|Z11406.1|HSS1B16B H.sapiens gamma-delta T-cell Vgamma9+... 77 2e-12
emb|Z11254.1|HSN3PHA1 H.sapiens gamma-delta T-cell Vgamma9+... 77 2e-12
emb|Z11222.1|HSN2TB1 H.sapiens gamma-delta T-cell Vgamma9+ ... 77 2e-12
emb|Z11205.1|HSN2B10 H.sapiens gamma-delta T-cell Vgamma9+ ... 77 2e-12
emb|Z11259.1|HSN3PHA14 H.sapiens gamma-delta T-cell Vgamma9... 77 2e-12
emb|Z11171.1|HSN1B11 H.sapiens gamma-delta T-cell Vgamma9+ ... 77 2e-12
gb|BC015833.1|BC015833 Homo sapiens, Similar to immunoglobu... 77 2e-12
emb|Z11391.1|HSS3PHA9 H.sapiens gamma-delta T-cell Vgamma9+... 77 2e-12
emb|Z11379.1|HSS3PHA11 H.sapiens gamma-delta T-cell Vgamma9... 77 2e-12
emb|Z11292.1|HSS1B18 H.sapiens gamma-delta T-cell Vgamma9+ ... 77 2e-12
emb|Z11200.1|HSN1TB5 H.sapiens gamma-delta T-cell Vgamma9+ ... 77 2e-12
emb|Z11256.1|HSN3PHA11 H.sapiens gamma-delta T-cell Vgamma9... 77 2e-12
emb|Z11408.1|HSS2B13B H.sapiens gamma-delta T-cell Vgamma9+... 77 2e-12
emb|Z11389.1|HSS3PHA7 H.sapiens gamma-delta T-cell Vgamma9+... 77 2e-12
emb|X57821.1|HSIGVL031 Human rearranged immunoglobulin lamb... 77 2e-12
gb|BC012876.1|BC012876 Homo sapiens, clone MGC:17259 IMAGE:... 77 2e-12
gb|U75771.1|REU75771 Raja eglanteria T cell antigen recepto... 77 2e-12
emb|Z11214.1|HSN2B2 H.sapiens gamma-delta T-cell Vgamma9+ mRNA 77 2e-12
emb|Z11196.1|HSN1B8 H.sapiens gamma-delta T-cell Vgamma9+ mRNA 77 2e-12
emb|Z11265.1|HSN3PHA3 H.sapiens gamma-delta T-cell Vgamma9+... 76 3e-12
emb|Z11323.1|HSS1PHA7 H.sapiens gamma-delta T-cell Vgamma9+... 76 3e-12
gb|BC009851.1|BC009851 Homo sapiens, clone MGC:15420 IMAGE:... 76 3e-12
emb|Z11329.1|HSS1TB15 H.sapiens gamma-delta T-cell Vgamma9+... 76 4e-12
emb|Z11295.1|HSS1B21 H.sapiens gamma-delta T-cell Vgamma9+ ... 76 4e-12
gb|M13823.1|HUMTCGXK Homo sapiens T cell receptor gamma cha... 76 4e-12
emb|Z11228.1|HSN2TB15 H.sapiens gamma-delta T-cell Vgamma9+... 76 4e-12
gb|U04616.1|OMU04616 Oncorhynchus mykiss clone RBTIGHTM1 Ig... 76 4e-12
gb|U78288.1|U78288 Gallus gallus clone 5751 T-cell receptor... 76 4e-12
emb|Z11380.1|HSS3PHA12 H.sapiens gamma-delta T-cell Vgamma9... 76 4e-12
emb|Z11342.1|HSS2B18 H.sapiens gamma-delta T-cell Vgamma9+ ... 76 4e-12
emb|Z11234.1|HSN2TB5 H.sapiens gamma-delta T-cell Vgamma9+ ... 76 4e-12
gb|M87474.1|MACTRCF Macaca mulatta (SIV-infected) T-cell re... 76 4e-12
gb|L16765.1|GINIGL Shark mRNA sequence 75 5e-12
gb|M37806.1|CHKTCRBCG G.gallus T-cell receptor beta chain V... 75 5e-12
emb|X90549.1|ABIGLC309 A.baeri mRNA for immunoglobulin ligh... 75 5e-12
emb|X57801.1|HSIGVL001 Human rearranged immunoglobulin lamb... 75 5e-12
emb|Z11289.1|HSS1B14 H.sapiens gamma-delta T-cell Vgamma9+ ... 75 5e-12
dbj|AB062639.1|AB062639 Seriola quinqueradiata IgL mRNA imm... 75 5e-12
dbj|AB062638.1|AB062638 Seriola quinqueradiata IgL mRNA imm... 75 5e-12
emb|Z11386.1|HSS3PHA4 H.sapiens gamma-delta T-cell Vgamma9+... 75 7e-12
emb|X17115.1|HSIGM201 Human mRNA for IgM heavy chain comple... 75 7e-12
gb|M64307.1|HEFIGLAAA H.francisci Ig rearranged L-chain mRN... 75 7e-12
gb|M18645.1|HUMIGLAM2 Human Ig rearranged lambda-chain mRNA... 75 7e-12
emb|Z11262.1|HSN3PHA17 H.sapiens gamma-delta T-cell Vgamma9... 60 8e-12
emb|X90557.1|ABIGLCST5 A.baeri mRNA for immunoglobulin ligh... 75 9e-12
emb|X15274.1|HSTRGV9F H.sapiens TRGV9 gene, allele V9*A2 75 9e-12
emb|AJ133188.1|ARU133188 Acipenser ruthenus mRNA for immuno... 75 9e-12
gb|BC020240.1|BC020240 Homo sapiens, clone MGC:31973 IMAGE:... 75 9e-12
emb|AJ309319.1|HSA309319 Homo sapiens partial mRNA for anti... 75 9e-12
gb|U07992.1|HSU07992 Human myeloma immunoglobulin lambda li... 75 9e-12
dbj|AB064322.1|AB064322 Seriola quinqueradiata mRNA for imm... 75 9e-12
emb|Z11263.1|HSN3PHA19 H.sapiens gamma-delta T-cell Vgamma9... 60 1e-11
gb|M81149.1|CHKTCRBC Chicken T-cell receptor beta-chain mRN... 74 1e-11
gb|M87790.1|HUMIGHEPAL Human (hybridoma H210) anti-hepatiti... 74 1e-11
dbj|D38137.1|RABTCRG3 Rabbit mRNA for T-cell receptor gamma... 74 1e-11
gb|U07991.1|HSU07991 Human lymphoma immunoglobulin lambda l... 74 1e-11
emb|X57823.1|HSIGVL033 Human rearranged immunoglobulin lamb... 74 1e-11
dbj|AB027448.1|AB027448 Homo sapiens mRNA for anti HBs anti... 74 1e-11
emb|Z11218.1|HSN2B6 H.sapiens gamma-delta T-cell Vgamma9+ mRNA 74 1e-11
gb|L38565.1|HSL38565 Human clone tat107Fab, immunoglobulin ... 74 1e-11
gb|BC019337.1|BC019337 Homo sapiens, Similar to immunoglobu... 74 2e-11
gb|M87476.1|MACTRCH Macaca mulatta (SIV-infected) T-cell re... 74 2e-11
emb|X07205.1|HSTRGV9 H.sapiens TRGV9 gene, allele V9*A1 74 2e-11
emb|Z11261.1|HSN3PHA16 H.sapiens gamma-delta T-cell Vgamma9... 74 2e-11
emb|X57805.1|HSIGVL005 Human rearranged immunoglobulin lamb... 74 2e-11
ref|XM_088183.1| Homo sapiens similar to T-cell receptor ga... 74 2e-11
dbj|AK056843.1|AK056843 Homo sapiens cDNA FLJ32281 fis, clo... 74 2e-11
emb|X05155.1|REFELVTC Feline leukaemia virus (FeLV) transdu... 74 2e-11
dbj|AB062663.1|AB062663 Seriola quinqueradiata IgL mRNA imm... 74 2e-11
dbj|AB062640.1|AB062640 Seriola quinqueradiata IgL mRNA imm... 74 2e-11
dbj|AB062637.1|AB062637 Seriola quinqueradiata IgL mRNA imm... 74 2e-11
gb|L76586.1|XELIGL03 Xenopus laevis immunoglobulin light ch... 74 2e-11
dbj|AB027437.2|AB027437 Homo sapiens mRNA for anti TNF-alph... 74 2e-11
emb|X82069.1|APIGLLC A.platyrhynchos mRNA for immunoglobuli... 74 2e-11
emb|X57824.1|HSIGVL034 Human rearranged immunoglobulin lamb... 73 3e-11
gb|BC022098.1|BC022098 Homo sapiens, clone MGC:31944 IMAGE:... 73 3e-11
emb|X90556.1|ABIGLCST3 A.baeri mRNA for immunoglobulin ligh... 73 3e-11
>gb|M54996.1|MUSTCRGZZX Mus musculus T-cell receptor gamma-chain mRNA, complete cds, clone
MNG8
Length = 1441
Score = 593 bits (1530), Expect = e-168
Identities = 288/304 (94%), Positives = 288/304 (94%)
Frame = +1
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ
Sbjct: 112 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 291
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 120
QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS
Sbjct: 292 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 471
Query: 121 GFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIR 180
GFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIR
Sbjct: 472 GFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIR 651
Query: 181 VYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEI 240
VYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEI
Sbjct: 652 VYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEI 831
Query: 241 FFPSIKKVATTCWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGN 300
FFPSIKKVATTCWQDKNDVLQFQF VIYLAIISFSLLRRTSVCGN
Sbjct: 832 FFPSIKKVATTCWQDKNDVLQFQFTSTSAYYTYLLLLLKSVIYLAIISFSLLRRTSVCGN 1011
Query: 301 EKKS 304
EKKS
Sbjct: 1012EKKS 1023
>emb|X00697.1|MMTCEL05 Murine mRNA for T-cell gamma gene
Length = 1286
Score = 583 bits (1504), Expect = e-165
Identities = 284/304 (93%), Positives = 285/304 (93%)
Frame = +1
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLLRWFTSCCLWVFGLGQLEQTELSVTR+TDENVQISCIVYLPYFSNTAIHWYRQKTNQ
Sbjct: 88 MLLLRWFTSCCLWVFGLGQLEQTELSVTRETDENVQISCIVYLPYFSNTAIHWYRQKTNQ 267
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 120
QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA WM SS
Sbjct: 268 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCAVWMRYSS 447
Query: 121 GFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIR 180
GFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIR
Sbjct: 448 GFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIR 627
Query: 181 VYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEI 240
VYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEI
Sbjct: 628 VYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEI 807
Query: 241 FFPSIKKVATTCWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGN 300
FFPSIKKVATTCWQDKNDVLQFQF VIYLAIISFSLLRRTSVCGN
Sbjct: 808 FFPSIKKVATTCWQDKNDVLQFQFTSTSAYYTYLLLLLKSVIYLAIISFSLLRRTSVCGN 987
Query: 301 EKKS 304
EKKS
Sbjct: 988 EKKS 999
>emb|X04397.1|MMTCRG04 Mouse non-productive mRNA for T-cell receptor gamma V2-J2-C2
Length = 1461
Score = 347 bits (889), Expect(2) = e-159
Identities = 170/186 (91%), Positives = 170/186 (91%)
Frame = +2
Query: 119 SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDV 178
SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDV
Sbjct: 491 SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDV 670
Query: 179 IRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQ 238
IRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQ
Sbjct: 671 IRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQ 850
Query: 239 EIFFPSIKKVATTCWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVC 298
EIFFPSIKKVATTCWQDKNDVLQFQF VIYLAIISFSLLRRTSVC
Sbjct: 851 EIFFPSIKKVATTCWQDKNDVLQFQFTSTSAYYTYLLLLLKSVIYLAIISFSLLRRTSVC 1030
Query: 299 GNEKKS 304
GNEKKS
Sbjct: 1031GNEKKS 1048
Score = 241 bits (615), Expect(2) = e-159
Identities = 113/116 (97%), Positives = 115/116 (98%)
Frame = +1
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLLRWFTSCCLWVFGLGQLEQTELSVTR+TDENVQISCIVYLPYFSNTAIHWYRQKTNQ
Sbjct: 142 MLLLRWFTSCCLWVFGLGQLEQTELSVTRETDENVQISCIVYLPYFSNTAIHWYRQKTNQ 321
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWM 116
QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA W+
Sbjct: 322 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCAVWI 489
>gb|K02900.1|MUSTCGXC Mouse T-cell receptor active gamma-chain mRNA from CTL-DFL12 cell
line, complete cds
Length = 1407
Score = 562 bits (1448), Expect = e-158
Identities = 275/304 (90%), Positives = 281/304 (91%)
Frame = +3
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLLRWFTSCCLWVFGLGQLEQTELSVTR+TDENVQISCIVYLPYFSNTAIHWYRQKTNQ
Sbjct: 96 MLLLRWFTSCCLWVFGLGQLEQTELSVTRETDENVQISCIVYLPYFSNTAIHWYRQKTNQ 275
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 120
QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA + SS
Sbjct: 276 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCAVY---SS 446
Query: 121 GFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIR 180
GFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLC+LEKFFPDVIR
Sbjct: 447 GFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCILEKFFPDVIR 626
Query: 181 VYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEI 240
VYWK+KNGNTILDSQEGDTLKTKGTYMKFSWLTVPER+MGKEH CIVKHENNKGGADQEI
Sbjct: 627 VYWKDKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERSMGKEHRCIVKHENNKGGADQEI 806
Query: 241 FFPSIKKVATTCWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGN 300
FFPSIKKVATTCWQDKNDVLQ QF VIYLAIISFSLLRRTSVC N
Sbjct: 807 FFPSIKKVATTCWQDKNDVLQLQFMSTSAYYTYLLLLLKSVIYLAIISFSLLRRTSVCCN 986
Query: 301 EKKS 304
EK+S
Sbjct: 987 EKRS 998
>gb|K02899.1|MUSTCGXB Mouse T-cell receptor aberrantly rearranged gamma-chain mRNA from
CTL-2C cell line, clone pHDS34
Length = 1156
Score = 315 bits (808), Expect(2) = e-122
Identities = 160/186 (86%), Positives = 160/186 (86%)
Frame = +3
Query: 119 SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDV 178
SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDV
Sbjct: 219 SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDV 398
Query: 179 IRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQ 238
IRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQ
Sbjct: 399 IRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQ 578
Query: 239 EIFFPSIKKVATTCWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVC 298
EIFFPSIKK DVLQFQF VIYLAIISFSLLRRTSVC
Sbjct: 579 EIFFPSIKK----------DVLQFQFTSTSAYYTYLLLLLKSVIYLAIISFSLLRRTSVC 728
Query: 299 GNEKKS 304
GNEKKS
Sbjct: 729 GNEKKS 746
Score = 148 bits (373), Expect(2) = e-122
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +2
Query: 46 FSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKE 105
FSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKE
Sbjct: 2 FSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKE 181
Query: 106 DEATYYCADW 115
DEATYYCA W
Sbjct: 182 DEATYYCAVW 211
>ref|NM_011558.2| Mus musculus T-cell receptor gamma, variable 4 (Tcrg-V4), mRNA
Length = 1423
Score = 426 bits (1095), Expect = e-117
Identities = 219/307 (71%), Positives = 239/307 (77%), Gaps = 5/307 (1%)
Frame = +3
Query: 3 LLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQF 62
LL+ CL FG G+LEQ E+S++R DE QISC V++ F + IHWYRQK NQ
Sbjct: 105 LLKVVIFLCLLTFGHGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGL 284
Query: 63 EYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGF 122
E+L+YV L ++KK+EASK+ +STS L I L++EDEA YYC+ +SSGF
Sbjct: 285 EFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCS--YGNSSGF 458
Query: 123 HKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVY 182
HKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVY
Sbjct: 459 HKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVY 638
Query: 183 WKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFF 242
WKEK+GNTILDSQEGDTLKT TYMKFSWLTVPERAMGKEH CIVKHENNKGGADQEIFF
Sbjct: 639 WKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAMGKEHRCIVKHENNKGGADQEIFF 818
Query: 243 PSIKKVA-----TTCWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSV 297
PSIKKVA TTCWQDKNDVLQ QF VIYLAIISFSLLRRTSV
Sbjct: 819 PSIKKVAVSTKPTTCWQDKNDVLQLQFTITSAYYTYLLLLLKSVIYLAIISFSLLRRTSV 998
Query: 298 CGNEKKS 304
CGNEKKS
Sbjct: 999 CGNEKKS 1019
>emb|X04699.1|MMGAMTCR M.musculus RNA for gamma chain of T-cell receptor
Length = 1423
Score = 426 bits (1095), Expect = e-117
Identities = 219/307 (71%), Positives = 239/307 (77%), Gaps = 5/307 (1%)
Frame = +3
Query: 3 LLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQF 62
LL+ CL FG G+LEQ E+S++R DE QISC V++ F + IHWYRQK NQ
Sbjct: 105 LLKVVIFLCLLTFGHGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGL 284
Query: 63 EYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGF 122
E+L+YV L ++KK+EASK+ +STS L I L++EDEA YYC+ +SSGF
Sbjct: 285 EFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCS--YGNSSGF 458
Query: 123 HKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVY 182
HKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVY
Sbjct: 459 HKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVY 638
Query: 183 WKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFF 242
WKEK+GNTILDSQEGDTLKT TYMKFSWLTVPERAMGKEH CIVKHENNKGGADQEIFF
Sbjct: 639 WKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAMGKEHRCIVKHENNKGGADQEIFF 818
Query: 243 PSIKKVA-----TTCWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSV 297
PSIKKVA TTCWQDKNDVLQ QF VIYLAIISFSLLRRTSV
Sbjct: 819 PSIKKVAVSTKPTTCWQDKNDVLQLQFTITSAYYTYLLLLLKSVIYLAIISFSLLRRTSV 998
Query: 298 CGNEKKS 304
CGNEKKS
Sbjct: 999 CGNEKKS 1019
>gb|M54990.1|MUSTCRGZZY Mus musculus T-cell receptor gamma-chain mRNA, complete cds, clone
MNG7
Length = 1407
Score = 422 bits (1084), Expect = e-116
Identities = 218/307 (71%), Positives = 236/307 (76%), Gaps = 5/307 (1%)
Frame = +3
Query: 3 LLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQF 62
LL+ CL FG G+LEQ E+S++R DE QISC V++ F + IHWYRQK NQ
Sbjct: 102 LLKVVIFLCLLTFGHGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGL 281
Query: 63 EYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGF 122
E+L+YV L ++KK+EASK+ +STS L I L++EDEA YYC S GF
Sbjct: 282 EFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYC------SYGF 443
Query: 123 HKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVY 182
HKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVY
Sbjct: 444 HKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVY 623
Query: 183 WKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFF 242
WKEK+GNTILDSQEGDTLKT TYMKFSWLTVPERAMGKEH CIVKHENNKGGADQEIFF
Sbjct: 624 WKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAMGKEHRCIVKHENNKGGADQEIFF 803
Query: 243 PSIKKVA-----TTCWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSV 297
PSIKKVA TTCWQDKNDVLQ QF VIYLAIISFSLLRRTSV
Sbjct: 804 PSIKKVAVSTKPTTCWQDKNDVLQLQFTITSAYYTYLLLLLKSVIYLAIISFSLLRRTSV 983
Query: 298 CGNEKKS 304
CGNEKKS
Sbjct: 984 CGNEKKS 1004
>gb|M54998.1|MUSTCRGZZW Mus musculus T-cell receptor gamma-chain mRNA, 3' end, clone MNG9
Length = 1096
Score = 421 bits (1083), Expect = e-116
Identities = 210/231 (90%), Positives = 211/231 (90%)
Frame = +1
Query: 74 QRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLI 133
QRPLGGKHKKIEASKDFKSSTSTLEIN LKKEDEATYYCAD+ SSGFHKVFAEGTKLI
Sbjct: 1 QRPLGGKHKKIEASKDFKSSTSTLEINSLKKEDEATYYCADY---SSGFHKVFAEGTKLI 171
Query: 134 VIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILD 193
VIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILD
Sbjct: 172 VIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILD 351
Query: 194 SQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATTCW 253
SQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATTCW
Sbjct: 352 SQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATTCW 531
Query: 254 QDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
QDKNDVLQFQF VIYLAIISFSLLRRTSVCGNEKKS
Sbjct: 532 QDKNDVLQFQFTSTSAYYTYLLLLLKSVIYLAIISFSLLRRTSVCGNEKKS 684
>emb|X03802.1|MMTCRG02 M.musculus mRNA for Tcell receptor gamma chain
Length = 1349
Score = 412 bits (1060), Expect = e-113
Identities = 210/327 (64%), Positives = 242/327 (73%), Gaps = 23/327 (7%)
Frame = +1
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLLRW T CCLWVFGLGQLEQTELSVTR TDE+ QISCIV LPYFSNTAIHWYRQK +
Sbjct: 88 MLLLRWPTFCCLWVFGLGQLEQTELSVTRATDESAQISCIVSLPYFSNTAIHWYRQKA-K 264
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 120
+FEYLIYV+TNYNQRPLGGK+KKIEASKDF++STSTL+INYLKKEDEATYYCA S +S
Sbjct: 265 KFEYLIYVSTNYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVCRSGTS 444
Query: 121 GFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIR 180
+ K+FA+GTKL+VIP DKR D+D SPKPTIFLPS AETNLHK GTYLCLLEKFFP VIR
Sbjct: 445 -WVKIFAKGTKLVVIPPDKRTDSDFSPKPTIFLPSAAETNLHKAGTYLCLLEKFFPKVIR 621
Query: 181 VYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEI 240
VYWKEK+G IL+SQEG+T+KT YMKFSWLTV E +M KEHSCIVKHENNK G DQEI
Sbjct: 622 VYWKEKDGEKILESQEGNTIKTNDRYMKFSWLTVTEDSMAKEHSCIVKHENNKRGVDQEI 801
Query: 241 FFPSIKKVATT-----------------------CWQDKNDVLQFQFXXXXXXXXXXXXX 277
FP I K TT C + + D+LQ Q
Sbjct: 802 LFPPIGKAFTTINVNPRDSVLRHENVNNATDLEDCMKGRKDMLQLQVTTTYAFYTYLILF 981
Query: 278 XXXVIYLAIISFSLLRRTSVCGNEKKS 304
+++LA + F L RR ++ ++++S
Sbjct: 982 FKSMVHLAFVVFCLFRRAAMSCDDQRS 1062
>emb|X04315.1|MMTCRG01 Mouse non-productive mRNA for T-cell receptor gamma V4-J1-C1
Length = 1368
Score = 325 bits (833), Expect(2) = e-112
Identities = 163/191 (85%), Positives = 164/191 (85%), Gaps = 5/191 (2%)
Frame = +1
Query: 119 SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDV 178
SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDV
Sbjct: 385 SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDV 564
Query: 179 IRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQ 238
IRVYWKEK+GNTILDSQEGDTLKT TYMKFSWL VPERAMGKEH CIVKHENNKGGADQ
Sbjct: 565 IRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLIVPERAMGKEHRCIVKHENNKGGADQ 744
Query: 239 EIFFPSIKKVAT-----TCWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLR 293
EIFFPSIKKVA TCWQDKNDVLQ QF VIYLAIISFSLLR
Sbjct: 745 EIFFPSIKKVAVSTKPITCWQDKNDVLQLQFTITSAYYTYLLLLLKSVIYLAIISFSLLR 924
Query: 294 RTSVCGNEKKS 304
RTSVCGNEKKS
Sbjct: 925 RTSVCGNEKKS 957
Score = 106 bits (264), Expect(2) = e-112
Identities = 54/111 (48%), Positives = 72/111 (64%)
Frame = +2
Query: 3 LLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQF 62
LL+ CL FG G+LEQ E+S++R DE QISC V++ F + IHWYRQK NQ
Sbjct: 41 LLKVVIFLCLLTFGHGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGL 220
Query: 63 EYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA 113
E+L+YV L ++KK+EASK+ +STS L I L++EDEA YYC+
Sbjct: 221 EFLLYVLATPTHVFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCS 373
>gb|BC003826.1|BC003826 Mus musculus, Similar to T-cell receptor gamma, variable 4, clone
MGC:6230 IMAGE:3495512, mRNA, complete cds
Length = 1584
Score = 408 bits (1049), Expect = e-112
Identities = 209/343 (60%), Positives = 241/343 (69%), Gaps = 39/343 (11%)
Frame = +2
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLLRW T CCLWVFGLGQLEQTELSVTR TDE+ QISCIV LPYFSNTAIHWYRQK +
Sbjct: 95 MLLLRWPTFCCLWVFGLGQLEQTELSVTRATDESAQISCIVSLPYFSNTAIHWYRQKA-K 271
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 120
+FEYLIYV+TNYNQRPLGGK+KKIEASKDF++STSTL+INYLKKEDEATYYCA W S
Sbjct: 272 KFEYLIYVSTNYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVWTGTS- 448
Query: 121 GFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIR 180
+ K+FA+GTKL+VIP DKR D+D SPKPTIFLPS AETNLHK GTYLCLLEKFFP+VIR
Sbjct: 449 -WVKIFAKGTKLVVIPPDKRTDSDFSPKPTIFLPSAAETNLHKAGTYLCLLEKFFPEVIR 625
Query: 181 VYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEI 240
VYWKEK+G IL+SQEG+T+KT YMKFSWLTV E +M KEHSCIVKHENNK G DQEI
Sbjct: 626 VYWKEKDGEKILESQEGNTIKTNDRYMKFSWLTVTEDSMAKEHSCIVKHENNKRGVDQEI 805
Query: 241 FFPSIKKVAT---------------------------------------TCWQDKNDVLQ 261
FP I K A C + + D+LQ
Sbjct: 806 LFPPIGKAANIITPTESALKTESAFTTINVNPRDSVLRHENVNNATDLEDCMKGRKDMLQ 985
Query: 262 FQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
Q +++LA + F L RR ++ ++++S
Sbjct: 986 LQVTTTYAFYTYLILFFKSMVHLAFVVFCLFRRAAMSCDDQRS 1114
>gb|S75435.1|S75435 TCR gamma C4L=T-cell receptor gamma chain {clone RG4} [rats,
thymic lymphoma cell line cFTL53, mRNA, 1483 nt]
Length = 1483
Score = 393 bits (1010), Expect = e-108
Identities = 200/307 (65%), Positives = 231/307 (75%), Gaps = 5/307 (1%)
Frame = +2
Query: 3 LLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQF 62
LL+ CL FG G+LEQ E+S++R DE +ISC ++ F + AIHWYRQK NQ
Sbjct: 161 LLKVVIFSCLLTFGRGKLEQPEISISRARDETAEISCKGFVESFQSVAIHWYRQKPNQGL 340
Query: 63 EYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGF 122
E+L+YV + L K+KK++ASK+ +STS L I L++EDEA YYC+ SSG+
Sbjct: 341 EFLLYVLATPTETFLNKKYKKMKASKNSSASTSILTIYSLEEEDEAIYYCS--YGYSSGW 514
Query: 123 HKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVY 182
KVFAEGTKLIV+P+DK +ADISPKPTIFLPS AETNLHKTGTYLCLLEKFFPDVIRVY
Sbjct: 515 SKVFAEGTKLIVVPADKSFNADISPKPTIFLPSSAETNLHKTGTYLCLLEKFFPDVIRVY 694
Query: 183 WKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFF 242
WKEK+ NTILDSQEG+TLKT TYMKFSWLTVPE +MGKEH CIVKHENNKGGADQEIFF
Sbjct: 695 WKEKDSNTILDSQEGETLKTNDTYMKFSWLTVPEGSMGKEHRCIVKHENNKGGADQEIFF 874
Query: 243 PSIKKVA-----TTCWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSV 297
PSIKKVA TTCWQDKNDVLQ QF V+YLAIISF LLRRT+
Sbjct: 875 PSIKKVALSTQPTTCWQDKNDVLQLQFTGTSAYYTYLLLLLKSVLYLAIISFFLLRRTAS 1054
Query: 298 CGNEKKS 304
CGN+K+S
Sbjct: 1055CGNKKRS 1075
>emb|Z27087.1|RNTCRGA R.norvegicus (F344/Crj)rearranged mRNA for T-cell receptor gamma
chain (1483bp)
Length = 1483
Score = 393 bits (1010), Expect = e-108
Identities = 200/307 (65%), Positives = 231/307 (75%), Gaps = 5/307 (1%)
Frame = +2
Query: 3 LLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQF 62
LL+ CL FG G+LEQ E+S++R DE +ISC ++ F + AIHWYRQK NQ
Sbjct: 161 LLKVVIFSCLLTFGRGKLEQPEISISRARDETAEISCKGFVESFQSVAIHWYRQKPNQGL 340
Query: 63 EYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGF 122
E+L+YV + L K+KK++ASK+ +STS L I L++EDEA YYC+ SSG+
Sbjct: 341 EFLLYVLATPTETFLNKKYKKMKASKNSSASTSILTIYSLEEEDEAIYYCS--YGYSSGW 514
Query: 123 HKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVY 182
KVFAEGTKLIV+P+DK +ADISPKPTIFLPS AETNLHKTGTYLCLLEKFFPDVIRVY
Sbjct: 515 SKVFAEGTKLIVVPADKSFNADISPKPTIFLPSSAETNLHKTGTYLCLLEKFFPDVIRVY 694
Query: 183 WKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFF 242
WKEK+ NTILDSQEG+TLKT TYMKFSWLTVPE +MGKEH CIVKHENNKGGADQEIFF
Sbjct: 695 WKEKDSNTILDSQEGETLKTNDTYMKFSWLTVPEGSMGKEHRCIVKHENNKGGADQEIFF 874
Query: 243 PSIKKVA-----TTCWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSV 297
PSIKKVA TTCWQDKNDVLQ QF V+YLAIISF LLRRT+
Sbjct: 875 PSIKKVALSTQPTTCWQDKNDVLQLQFTGTSAYYTYLLLLLKSVLYLAIISFFLLRRTAS 1054
Query: 298 CGNEKKS 304
CGN+K+S
Sbjct: 1055CGNKKRS 1075
>gb|U07554.1|MMU07554 Mus musculus AKR T-cell receptor gamma chain V gamma 1-J gamma 4-C
gamma 4 region mRNA, partial cds
Length = 1005
Score = 392 bits (1006), Expect = e-107
Identities = 200/336 (59%), Positives = 232/336 (68%), Gaps = 39/336 (11%)
Frame = +1
Query: 8 TSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIY 67
T CCLWVFGLGQL+QTE+SVTR TDE+ QISCI LP F NT IHWYRQK +QFEYLIY
Sbjct: 4 TFCCLWVFGLGQLKQTEVSVTRATDESAQISCIASLPDFGNTEIHWYRQKA-KQFEYLIY 180
Query: 68 VATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFA 127
V TNYNQRPLGGKHKKIEASKDF++STSTL+INYLKKEDEATYYCA W+S S + K+FA
Sbjct: 181 VQTNYNQRPLGGKHKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVWISTS--WVKIFA 354
Query: 128 EGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKN 187
+GTKL+VIP DKR D+D SPKPTIFLPS AETNLHK GTYLCLLEKFFP+VIRVYWKEK+
Sbjct: 355 KGTKLVVIPPDKRTDSDFSPKPTIFLPSAAETNLHKAGTYLCLLEKFFPEVIRVYWKEKD 534
Query: 188 GNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK 247
G IL+SQEG+T+KT YMKFSWLTV E +M KEHSCIVKHENNK G DQEI FP I K
Sbjct: 535 GEKILESQEGNTIKTNDRYMKFSWLTVTEDSMAKEHSCIVKHENNKRGVDQEILFPPIGK 714
Query: 248 VAT---------------------------------------TCWQDKNDVLQFQFXXXX 268
A C + + D+LQ Q
Sbjct: 715 AANIITPTESALKTESAFTTINVNPRDSVLRHENVNNATDLEACMKGRKDMLQLQVTTTY 894
Query: 269 XXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
+++LA + F L RR ++ ++++S
Sbjct: 895 AFYAYLILFFKSMVHLAFVVFCLFRRAAMSCDDQRS 1002
>emb|X03983.1|MMTCRG4P Mouse non-functional transcript for T-cell receptor gamma from
alloreactive cytotoxic T-cell clone (3F9-gamma 4) V
10.8A-J10.5-C10.5 rearrangement
Length = 1354
Score = 347 bits (889), Expect = 9e-94
Identities = 170/186 (91%), Positives = 170/186 (91%)
Frame = +3
Query: 119 SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDV 178
SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDV
Sbjct: 384 SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDV 563
Query: 179 IRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQ 238
IRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQ
Sbjct: 564 IRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQ 743
Query: 239 EIFFPSIKKVATTCWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVC 298
EIFFPSIKKVATTCWQDKNDVLQFQF VIYLAIISFSLLRRTSVC
Sbjct: 744 EIFFPSIKKVATTCWQDKNDVLQFQFTSTSAYYTYLLLLLKSVIYLAIISFSLLRRTSVC 923
Query: 299 GNEKKS 304
GNEKKS
Sbjct: 924 GNEKKS 941
Score = 247 bits (630), Expect = 1e-63
Identities = 126/177 (71%), Positives = 134/177 (75%), Gaps = 1/177 (0%)
Frame = +1
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLLRWFTSCCLWVFGLGQLEQTELSVTR+TDENVQISCIVYLPYFSNTAIHWYRQKTNQ
Sbjct: 28 MLLLRWFTSCCLWVFGLGQLEQTELSVTRETDENVQISCIVYLPYFSNTAIHWYRQKTNQ 207
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSD-S 119
QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA WMS +
Sbjct: 208 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCAVWMSPVA 387
Query: 120 SGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFP 176
F + + P K L P P F + + + G L+ FP
Sbjct: 388 RAFTRYLQKEQSS**FPPTKGLMQTFPPSPLFFFLLLLKQISIRLGHTFVSLKSSFP 558
>emb|X64803.1|MMTCRG M.musculus mRNA of rearranged TCR gamma gene
Length = 1118
Score = 343 bits (879), Expect = 1e-92
Identities = 171/190 (90%), Positives = 171/190 (90%), Gaps = 2/190 (1%)
Frame = +2
Query: 117 SDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFP 176
S SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFP
Sbjct: 359 SHSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFP 538
Query: 177 DVIRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGA 236
DVIRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGA
Sbjct: 539 DVIRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGA 718
Query: 237 DQEIFFPSIKKVATTCWQDKNDVL--QFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRR 294
DQEIFFPSIKKVATTCWQDKNDVL QFQF VIYLAIISFSLLRR
Sbjct: 719 DQEIFFPSIKKVATTCWQDKNDVLQFQFQFTSTSAYYTYLLLLLKSVIYLAIISFSLLRR 898
Query: 295 TSVCGNEKKS 304
TSVCGNEKKS
Sbjct: 899 TSVCGNEKKS 928
Score = 238 bits (607), Expect = 5e-61
Identities = 123/176 (69%), Positives = 131/176 (73%)
Frame = +3
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLLRWFTSCCLWVFGLGQLEQTELSVTR+TDENVQISCIVYLPYFSNTAIHWYRQKTNQ
Sbjct: 21 MLLLRWFTSCCLWVFGLGQLEQTELSVTRETDENVQISCIVYLPYFSNTAIHWYRQKTNQ 200
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 120
QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA +
Sbjct: 201 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA---VIAR 371
Query: 121 GFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFP 176
F + + P K L P P F + + + G L+ FP
Sbjct: 372 AFTRYLQKEQSS**FPPTKGLMQTFPPSPLFFFLLLLKQISIRLGHTFVSLKSSFP 539
>emb|X03984.1|MMTCRG6P Mouse non-functional transcript for T-cell receptor gamma from
alloreactive cytotoxic T-cell clone (3F9 gamma 6)
V-J13.4-C13.4 rearrangement
Length = 1064
Score = 329 bits (844), Expect(2) = 1e-90
Identities = 164/193 (84%), Positives = 168/193 (86%), Gaps = 5/193 (2%)
Frame = +2
Query: 117 SDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFP 176
++SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFP
Sbjct: 77 TESSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFP 256
Query: 177 DVIRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGA 236
DVIRVYWKEK+GNTILDSQEGDTLKT TYMKFSWLTVPERAMGKEH CIVKHENNKGGA
Sbjct: 257 DVIRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAMGKEHRCIVKHENNKGGA 436
Query: 237 DQEIFFPSIKKVA-----TTCWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSL 291
DQEIFFPSIKKVA TTCWQD+NDVLQ QF VIYLAIISFSL
Sbjct: 437 DQEIFFPSIKKVAVSTKPTTCWQDRNDVLQLQFTITSAYYTYLLLLLKSVIYLAIISFSL 616
Query: 292 LRRTSVCGNEKKS 304
LRRTSVCGNEKKS
Sbjct: 617 LRRTSVCGNEKKS 655
Score = 29.6 bits (65), Expect(2) = 1e-90
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1
Query: 92 SSTSTLEINYLKKEDEATYYCA 113
+STS L I L++EDEA YYC+
Sbjct: 10 ASTSILTIYSLEEEDEAIYYCS 75
>gb|S75437.1|S75437 Rattus norvegicus T-cell receptor gamma chain (TCRg; C4L) mRNA,
complete cds
Length = 1474
Score = 244 bits (623), Expect(2) = 2e-89
Identities = 127/210 (60%), Positives = 145/210 (68%), Gaps = 24/210 (11%)
Frame = +3
Query: 119 SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDV 178
S+ + KVFA+GTKL+VIPSDK +D+DISPKPTIFLPS AETNL KTGTYLCLLEKFFPDV
Sbjct: 444 STSWVKVFAKGTKLVVIPSDKLIDSDISPKPTIFLPSSAETNLQKTGTYLCLLEKFFPDV 623
Query: 179 IRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQ 238
IRVYWKEK+ NTILDSQEG+TLKT TYMKFSWLTVPE +MGKEH CIVKHENNKGGADQ
Sbjct: 624 IRVYWKEKDSNTILDSQEGETLKTNDTYMKFSWLTVPEGSMGKEHRCIVKHENNKGGADQ 803
Query: 239 EIFFPSIKKVATT-----------------------CWQDKNDVLQFQFXXXXXXXXXXX 275
EIFFPSIKKV TT C + D+LQ Q
Sbjct: 804 EIFFPSIKKVFTTINVDPRESVFRHENVNNATVLEACLKVSKDMLQLQVTTTSAFYVYLT 983
Query: 276 XXXXXVIYLAIISFSLLRRTSV-CGNEKKS 304
V++LA + F L RR ++ C ++ S
Sbjct: 984 LFFKSVVHLAFVVFWLFRRVNMPCDGQRSS 1073
Score = 110 bits (275), Expect(2) = 2e-89
Identities = 60/117 (51%), Positives = 68/117 (57%)
Frame = +2
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLLRWFT CLWVFGLGQL+QT++SVT+
Sbjct: 209 MLLLRWFTFSCLWVFGLGQLKQTKMSVTK------------------------------- 295
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMS 117
AT YNQ PL GK+KKIEA KDF++STS L +NYLKKEDEATYYCA W S
Sbjct: 296 --------ATGYNQLPLDGKYKKIEARKDFQTSTSNLTLNYLKKEDEATYYCALWAS 442
>emb|Z27105.1|RNTCRGB R.norvegicus (F344/Crj) rearranged mRNA for T-cell receptor gamma
chain (1474bp)
Length = 1474
Score = 244 bits (623), Expect(2) = 2e-89
Identities = 127/210 (60%), Positives = 145/210 (68%), Gaps = 24/210 (11%)
Frame = +3
Query: 119 SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDV 178
S+ + KVFA+GTKL+VIPSDK +D+DISPKPTIFLPS AETNL KTGTYLCLLEKFFPDV
Sbjct: 444 STSWVKVFAKGTKLVVIPSDKLIDSDISPKPTIFLPSSAETNLQKTGTYLCLLEKFFPDV 623
Query: 179 IRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQ 238
IRVYWKEK+ NTILDSQEG+TLKT TYMKFSWLTVPE +MGKEH CIVKHENNKGGADQ
Sbjct: 624 IRVYWKEKDSNTILDSQEGETLKTNDTYMKFSWLTVPEGSMGKEHRCIVKHENNKGGADQ 803
Query: 239 EIFFPSIKKVATT-----------------------CWQDKNDVLQFQFXXXXXXXXXXX 275
EIFFPSIKKV TT C + D+LQ Q
Sbjct: 804 EIFFPSIKKVFTTINVDPRESVFRHENVNNATVLEACLKVSKDMLQLQVTTTSAFYVYLT 983
Query: 276 XXXXXVIYLAIISFSLLRRTSV-CGNEKKS 304
V++LA + F L RR ++ C ++ S
Sbjct: 984 LFFKSVVHLAFVVFWLFRRVNMPCDGQRSS 1073
Score = 110 bits (275), Expect(2) = 2e-89
Identities = 60/117 (51%), Positives = 68/117 (57%)
Frame = +2
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLLRWFT CLWVFGLGQL+QT++SVT+
Sbjct: 209 MLLLRWFTFSCLWVFGLGQLKQTKMSVTK------------------------------- 295
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMS 117
AT YNQ PL GK+KKIEA KDF++STS L +NYLKKEDEATYYCA W S
Sbjct: 296 --------ATGYNQLPLDGKYKKIEARKDFQTSTSNLTLNYLKKEDEATYYCALWAS 442
>gb|M30175.1|MUSTCGXM Mouse T-cell receptor beta-chain mRNA C2 region, 3' end
Length = 913
Score = 308 bits (788), Expect = 5e-82
Identities = 150/166 (90%), Positives = 150/166 (90%)
Frame = +3
Query: 139 KRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGD 198
KRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGD
Sbjct: 3 KRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGD 182
Query: 199 TLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATTCWQDKND 258
TLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATTCWQDKND
Sbjct: 183 TLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATTCWQDKND 362
Query: 259 VLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
VLQFQF VIYLAIISFSLLRRTSVCGNEKKS
Sbjct: 363 VLQFQFTSTSAYYTYLLLLLKSVIYLAIISFSLLRRTSVCGNEKKS 500
>dbj|D55648.1|RATTCRGC Rattus sp. mRNA for T-cell receptor gamma chain, complete cds
Length = 1328
Score = 298 bits (763), Expect = 4e-79
Identities = 148/192 (77%), Positives = 158/192 (82%), Gaps = 5/192 (2%)
Frame = +3
Query: 118 DSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPD 177
DSSG+ KVFAEGTKLIV+P+DK +ADISPKPTIFLPS AETNLHKTGTYLCLLEKFFPD
Sbjct: 384 DSSGWSKVFAEGTKLIVVPADKSFNADISPKPTIFLPSSAETNLHKTGTYLCLLEKFFPD 563
Query: 178 VIRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGAD 237
VIRVYWKEK+ NTILDSQEG+TLKT TYMKFSWLTVPE +MGKEH CIVKHENNKGGAD
Sbjct: 564 VIRVYWKEKDSNTILDSQEGETLKTNDTYMKFSWLTVPEGSMGKEHRCIVKHENNKGGAD 743
Query: 238 QEIFFPSIKKVA-----TTCWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLL 292
QEIFFPSIKKVA TTCWQDKNDVLQ QF V YLAIISF LL
Sbjct: 744 QEIFFPSIKKVALSTQPTTCWQDKNDVLQLQFTGTSAYYTYLLLLLKSVRYLAIISFFLL 923
Query: 293 RRTSVCGNEKKS 304
RRT+ CGN+K+S
Sbjct: 924 RRTAFCGNKKRS 959
>gb|M30174.1|MUSTCGXL Mouse T-cell receptor beta-chain mRNA C1 region, 3' end
Length = 926
Score = 290 bits (743), Expect = 8e-77
Identities = 145/171 (84%), Positives = 146/171 (84%), Gaps = 5/171 (2%)
Frame = +3
Query: 139 KRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGD 198
KRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEK+GNTILDSQEGD
Sbjct: 3 KRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKDGNTILDSQEGD 182
Query: 199 TLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVA-----TTCW 253
TLKT TYMKFSWLTVPERAMGKEH CIVKHENNKGGADQEIFFPSIKKVA TTCW
Sbjct: 183 TLKTNDTYMKFSWLTVPERAMGKEHRCIVKHENNKGGADQEIFFPSIKKVAVSTKPTTCW 362
Query: 254 QDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
QDKNDVLQ QF VIYLAIISFSLLRRTSVCGNEKKS
Sbjct: 363 QDKNDVLQLQFTITSAYYTYLLLLLKSVIYLAIISFSLLRRTSVCGNEKKS 515
>gb|M18858.1|MUSTCRCGA Mouse T cell receptor C-gamma-7.1 mRNA, 3' end
Length = 2413
Score = 289 bits (739), Expect = 2e-76
Identities = 146/173 (84%), Positives = 148/173 (85%), Gaps = 5/173 (2%)
Frame = +1
Query: 137 SDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQE 196
+DKRLDADISPKPTIFLPSV ETNLHKTGTYLCLLEKFFPDVIRVYWKEK+GNTILDSQE
Sbjct: 1486 TDKRLDADISPKPTIFLPSV-ETNLHKTGTYLCLLEKFFPDVIRVYWKEKDGNTILDSQE 1662
Query: 197 GDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVA-----TT 251
GDTLKTK TYMKFSWLTVPERAMGKEH CIVKHENNKGGADQEIFFPSIKKVA TT
Sbjct: 1663 GDTLKTKDTYMKFSWLTVPERAMGKEHRCIVKHENNKGGADQEIFFPSIKKVAVSTKPTT 1842
Query: 252 CWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
CWQDKNDVLQ QF VIYLAIISFSLLRRTSVCGNEKKS
Sbjct: 1843 CWQDKNDVLQLQFTITSAYYTYLLLLLKSVIYLAIISFSLLRRTSVCGNEKKS 2001
>gb|M34969.1|MUSTGVJCA Mouse (clone RAG4) T-cell receptor rearranged gamma-chain mRNA
V2-J2-C2 region, 5' end
Length = 444
Score = 279 bits (713), Expect = 2e-73
Identities = 135/140 (96%), Positives = 137/140 (97%)
Frame = +1
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLLRWFTSCCLWVFGLGQLEQTELSVTR+TDENVQISCIVYLPYFSNTAIHWYRQKTNQ
Sbjct: 31 MLLLRWFTSCCLWVFGLGQLEQTELSVTRETDENVQISCIVYLPYFSNTAIHWYRQKTNQ 210
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 120
QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA W+ SS
Sbjct: 211 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCAVWI--SS 384
Query: 121 GFHKVFAEGTKLIVIPSDKR 140
GFHKVFAEGTKLIVIPSDKR
Sbjct: 385 GFHKVFAEGTKLIVIPSDKR 444
>gb|M34970.1|MUSTGVJCB Mouse (clone RAG11) T-cell receptor rearranged gamma-chain mRNA
V2-J2-C2 region, 5' end
Length = 447
Score = 278 bits (712), Expect = 3e-73
Identities = 135/140 (96%), Positives = 137/140 (97%)
Frame = +1
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLLRWFTSCCLWVFGLGQLEQTELSVTR+TDENVQISCIVYLPYFSNTAIHWYRQKTNQ
Sbjct: 31 MLLLRWFTSCCLWVFGLGQLEQTELSVTRETDENVQISCIVYLPYFSNTAIHWYRQKTNQ 210
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 120
QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA W+ SS
Sbjct: 211 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCAVWIY-SS 387
Query: 121 GFHKVFAEGTKLIVIPSDKR 140
GFHKVFAEGTKLIVIPSDKR
Sbjct: 388 GFHKVFAEGTKLIVIPSDKR 447
>gb|M34971.1|MUSTGVJCC Mouse (clone RAG42) T-cell rearranged receptor gamma-chain mRNA
V2-J2-C2 region, 5' end
Length = 447
Score = 278 bits (711), Expect = 4e-73
Identities = 135/140 (96%), Positives = 136/140 (96%)
Frame = +1
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLLRWFTSCCLWVFGLGQLEQTELSVTR+TDENVQISCIVYLPYFSNTAIHWYRQKTNQ
Sbjct: 31 MLLLRWFTSCCLWVFGLGQLEQTELSVTRETDENVQISCIVYLPYFSNTAIHWYRQKTNQ 210
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 120
QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA W SS
Sbjct: 211 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCAVW-GRSS 387
Query: 121 GFHKVFAEGTKLIVIPSDKR 140
GFHKVFAEGTKLIVIPSDKR
Sbjct: 388 GFHKVFAEGTKLIVIPSDKR 447
>gb|M16768.1|HUMTCRGA Human T-cell receptor gamma chain VJCI-CII-CIII region mRNA,
complete cds
Length = 1530
Score = 277 bits (708), Expect = 9e-73
Identities = 144/300 (48%), Positives = 193/300 (64%), Gaps = 7/300 (2%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G G LEQ ++S T+ + ++ C+V S T+++WYR++ + ++L+ ++ +
Sbjct: 198 LCVYGAGHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYD 377
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGT 130
R G K E + ++STSTL I+ ++K+D ATYYCA + K+F GT
Sbjct: 378 GTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEKQDIATYYCALL---EGNYKKLFGSGT 548
Query: 131 KLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNT 190
L+V +DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPDVI+++W+EK NT
Sbjct: 549 TLVV--TDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHWQEKKSNT 722
Query: 191 ILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVAT 250
IL SQEG+T+KT TYMKFSWLTVPE+++ KEH CIV+HENNK G DQEI FP IK
Sbjct: 723 ILGSQEGNTMKTNDTYMKFSWLTVPEKSLDKEHRCIVRHENNKNGVDQEIIFPPIKTDVI 902
Query: 251 T------CWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
T C +D ND L Q V+Y AII+ LLRRT+ C N +KS
Sbjct: 903 TMDPKDNCSKDANDTLLLQLTNTSAYYMYLLLLLKSVVYFAIITCCLLRRTAFCCNGEKS 1082
>gb|M34972.1|MUSTGVJCD Mouse (clone RAG50) T-cell receptor rearranged gamma-chain mRNA
V2-J2-C2 region, 5' end
Length = 444
Score = 274 bits (701), Expect = 6e-72
Identities = 134/140 (95%), Positives = 136/140 (96%)
Frame = +1
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLLRWFTSCCLWVFGLGQLEQTELSVTR+TDENVQISCIVYLPYFSNTAIHWYRQKTNQ
Sbjct: 31 MLLLRWFTSCCLWVFGLGQLEQTELSVTRETDENVQISCIVYLPYFSNTAIHWYRQKTNQ 210
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 120
QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA + SS
Sbjct: 211 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA--VRYSS 384
Query: 121 GFHKVFAEGTKLIVIPSDKR 140
GFHKVFAEGTKLIVIPSDKR
Sbjct: 385 GFHKVFAEGTKLIVIPSDKR 444
>emb|X03801.1|MMTCRG1P M.musculus mRNA for Tcell receptor gamma chain
Length = 508
Score = 243 bits (619), Expect(2) = 3e-71
Identities = 114/116 (98%), Positives = 115/116 (98%)
Frame = +1
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLLRWFTSCCLWVFGLGQLEQTELSVTR+TDENVQISCIVYLPYFSNTAIHWYRQKTNQ
Sbjct: 88 MLLLRWFTSCCLWVFGLGQLEQTELSVTRETDENVQISCIVYLPYFSNTAIHWYRQKTNQ 267
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWM 116
QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA WM
Sbjct: 268 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCAVWM 435
Score = 51.2 bits (121), Expect(2) = 3e-71
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +2
Query: 118 DSSGFHKVFAEGTKLIVIPSDKRL 141
DSSGFHKVFAEGTKLIVIPSDKRL
Sbjct: 437 DSSGFHKVFAEGTKLIVIPSDKRL 508
>emb|X72500.1|HSTCRGSA H.sapiens mRNA for soluble gamma TCR
Length = 825
Score = 260 bits (664), Expect = 1e-67
Identities = 133/261 (50%), Positives = 177/261 (66%), Gaps = 9/261 (3%)
Frame = +1
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G G LEQ ++S T+ + ++ C+V S T+++WYR++ + ++L+ ++ +
Sbjct: 46 LCVYGAGHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYD 225
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW--MSDSSGFHKVFAE 128
R G K E + ++STSTL I+ ++K+D ATYYCA W + KVF
Sbjct: 226 GTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEKQDIATYYCALWEAQQELGKKIKVFGP 405
Query: 129 GTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNG 188
GTKLI+ +DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPDVI+++W+EK
Sbjct: 406 GTKLII--TDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHWEEKKS 579
Query: 189 NTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKV 248
NTIL SQEG+T+KT TYMKFSWLTVPE+++ KEH CIV+HENNK G DQEI FP IK
Sbjct: 580 NTILGSQEGNTMKTNDTYMKFSWLTVPEKSLDKEHRCIVRHENNKNGVDQEIIFPPIKTD 759
Query: 249 ATT------CWQDKNDVLQFQ 263
T C +D ND L Q
Sbjct: 760 VITMDPKDNCSKDANDTLLLQ 822
>gb|M16804.1|HUMTCRGB Human T-cell receptor gamma chain VJCI-3(CII)-CIII region mRNA, 3'
end
Length = 1402
Score = 260 bits (664), Expect = 1e-67
Identities = 140/322 (43%), Positives = 188/322 (57%), Gaps = 39/322 (12%)
Frame = +1
Query: 22 QTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGG-K 80
Q E+S T+ + ++ C+V S T+++WYR++ + ++L+ ++ + R G
Sbjct: 4 QPEISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIP 183
Query: 81 HKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKR 140
K E + ++STSTL I+ ++K+D ATYYCA W + K+F GT L+V +DK+
Sbjct: 184 SGKFEVDRIPETSTSTLTIHNVEKQDIATYYCALW---EGYYKKLFGSGTTLVV--TDKQ 348
Query: 141 LDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGDTL 200
LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I+++W+EK NTIL SQEG+T+
Sbjct: 349 LDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKIHWQEKKSNTILGSQEGNTM 528
Query: 201 KTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATT--------- 251
KT TYMKFSWLTVPE+++ KEH CIV+HENNK G DQEI FP IK TT
Sbjct: 529 KTNDTYMKFSWLTVPEKSLDKEHRCIVRHENNKNGIDQEIIFPPIKTDVTTVDPKDSYSK 708
Query: 252 -----------------------------CWQDKNDVLQFQFXXXXXXXXXXXXXXXXVI 282
C +D ND L Q V+
Sbjct: 709 DANDVTTVDPKYNYSKDANDVITMDPKDNCSKDANDTLLLQLTNTSAYYMYLLLLLKSVV 888
Query: 283 YLAIISFSLLRRTSVCGNEKKS 304
Y AII+ LLRRT+ C N +KS
Sbjct: 889 YFAIITCCLLRRTAFCCNGEKS 954
>dbj|D38134.1|RABTCRG Rabbit mRNA for T-cell receptor precursor (V-J-C region)
Length = 1035
Score = 247 bits (631), Expect = 8e-64
Identities = 138/316 (43%), Positives = 184/316 (57%), Gaps = 32/316 (10%)
Frame = +1
Query: 21 EQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPL--G 78
E+T VT+ T +V ++C + ++ IHWYR + + + L+Y + + + G
Sbjct: 70 EKTMTVVTKPTGSSVAVTCSITQ---QSSYIHWYRYQEGKAPQRLLYYVVSSTRSIVDSG 240
Query: 79 GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSD 138
+K +A K + S + N L ++D YYCA W + + K+F +GTKLIV P D
Sbjct: 241 FDTEKYQAYKSIQGSYNVFLRN-LGRDDSGVYYCAVWTKTQNVWIKIFPKGTKLIVTPPD 417
Query: 139 KRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGD 198
K+LD D SPKPTIFLPS+AET LHK GTYLCLLEKFFPDVI+VYWKEKNG+TIL+SQEG+
Sbjct: 418 KKLDGDFSPKPTIFLPSIAETKLHKAGTYLCLLEKFFPDVIKVYWKEKNGDTILESQEGN 597
Query: 199 TLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK----------- 247
T+K GTYMKFSWLTVP+++ KEH CIV+HEN + + QEI FP+I K
Sbjct: 598 TMKINGTYMKFSWLTVPQKSFDKEHRCIVEHENTR-ESKQEILFPAINKGTVLGAVEKKR 774
Query: 248 ------------VATTCWQDK-------NDVLQFQFXXXXXXXXXXXXXXXXVIYLAIIS 288
+ TT + K DVL+ Q +YLAI++
Sbjct: 775 KPSSLGSENRTVLGTTDMEGKPDHLGYAKDVLRLQLTNSSVYYTYLLLLLKSSVYLAIVT 954
Query: 289 FSLLRRTSVCGNEKKS 304
FSL RRT+ C EK S
Sbjct: 955 FSLFRRTADCSAEKSS 1002
>emb|Y00790.1|HSTCRGR Human mRNA for T-cell receptor gamma-chain
Length = 1080
Score = 238 bits (607), Expect = 5e-61
Identities = 141/310 (45%), Positives = 177/310 (56%), Gaps = 25/310 (8%)
Frame = +1
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTA-IHWYRQKTNQQFEYLIY--VATNYNQRP 76
LE SVTRQT + +I+C + + +NT IHWY + + + L+Y V+T +
Sbjct: 100 LEGRTKSVTRQTGSSAEITCDLTV---TNTFYIHWYLHQEGKAPQRLLYYDVSTARDVLE 270
Query: 77 LGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIP 136
G K + S L + L + D YYCA W D K+F GT L+V
Sbjct: 271 SGLSPGKYYTHTPRRWSW-ILRLQNLIENDSGVYYCATW--DRPRLKKLFGSGTTLVV-- 435
Query: 137 SDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQE 196
+DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I+++W+EK NTIL SQE
Sbjct: 436 TDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKIHWQEKKSNTILGSQE 615
Query: 197 GDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATTC---- 252
G+T+KT TYMKFSWLTVPE ++ KEH CIV+HENNK G DQEI FP IK TT
Sbjct: 616 GNTMKTNDTYMKFSWLTVPEESLDKEHRCIVRHENNKNGIDQEIIFPPIKTDVTTVDPKY 795
Query: 253 -----------------W-QDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRR 294
W +D ND L Q V+Y AII+ LLRR
Sbjct: 796 NYSKDANDVITMDPKDNWSKDANDTLLLQLTNTSAYYTYLLLLLKSVVYFAIITCCLLRR 975
Query: 295 TSVCGNEKKS 304
T+ C N +KS
Sbjct: 976 TAFCCNGEKS 1005
>emb|X03985.1|MMTCRG7P Mouse non-functional transcript for T-cell receptor gamma from
alloreactive cytotoxic T-cell clone (3F9 gamma 7)
V10.8A-J10.5 rearrangement
Length = 360
Score = 237 bits (604), Expect = 1e-60
Identities = 115/122 (94%), Positives = 116/122 (94%)
Frame = +2
Query: 2 LLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQ 61
LLLRWFTSCCLWVFGLGQLEQTELSVTR+TDENVQISCIVYLPYFSNTAIHWYRQKTNQQ
Sbjct: 2 LLLRWFTSCCLWVFGLGQLEQTELSVTRETDENVQISCIVYLPYFSNTAIHWYRQKTNQQ 181
Query: 62 FEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSG 121
FEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA SG
Sbjct: 182 FEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA---V*CSG 352
Query: 122 FH 123
FH
Sbjct: 353 FH 358
>emb|X06774.1|HSTRGC64 Human mRNA for T-cell rearranging gamma gene (TRG)
V(g)8-J(g)2-C(g)2
Length = 1160
Score = 235 bits (600), Expect = 3e-60
Identities = 139/325 (42%), Positives = 177/325 (53%), Gaps = 40/325 (12%)
Frame = +2
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGG 79
LE SVTR T + I+C LP + HWY + + + L+Y +YN R +
Sbjct: 179 LEGRTKSVTRPTGSSAVITCD--LPVENAVYTHWYLHQEGKAPQRLLYY-DSYNSRVVLE 349
Query: 80 KHKKIEASKDFKSSTSTLE--INYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPS 137
E + S+ +L+ + L + D YYCA W +D + K+F GT L+V +
Sbjct: 350 SGISREKYHTYASTGKSLKFILENLIERDSGVYYCATW-TDRIYYKKLFGSGTTLVV--T 520
Query: 138 DKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEG 197
DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I+++W+EK NTIL SQEG
Sbjct: 521 DKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKIHWQEKKSNTILGSQEG 700
Query: 198 DTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATTC----- 252
+T+KT TYMKFSWLTVPE ++ KEH CIV+HENNK G DQEI FP IK TT
Sbjct: 701 NTMKTNDTYMKFSWLTVPEESLDKEHRCIVRHENNKNGIDQEIIFPPIKTDVTTVDPKDS 880
Query: 253 --------------------------------W-QDKNDVLQFQFXXXXXXXXXXXXXXX 279
W +D ND L Q
Sbjct: 881 YSKDANDVTTVDPKYNYSKDANDVTTMDPKDNWSKDANDTLLLQLTNTSAYYMYLLLLLK 1060
Query: 280 XVIYLAIISFSLLRRTSVCGNEKKS 304
V+Y AII+ LLRRT+ C N +KS
Sbjct: 1061SVVYFAIITCCLLRRTAFCCNGEKS 1135
>gb|M34973.1|MUSTGVJCE Mouse (clone RAG12) T-cell receptor rearranged gamma-chain mRNA
V1-J4-C4 region, 5' end
Length = 447
Score = 234 bits (596), Expect = 9e-60
Identities = 113/140 (80%), Positives = 126/140 (89%)
Frame = +1
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLLRWFTSCCLWVFGLGQLEQTELSVTR TDE+ QISCIV LPYFSNTAIHWYRQK +
Sbjct: 31 MLLLRWFTSCCLWVFGLGQLEQTELSVTRATDESAQISCIVSLPYFSNTAIHWYRQKA-K 207
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 120
+FEYLIYV+TNYNQRPLGGK+KKIEASKDF++STSTL+INYLKKEDEATYYCA +
Sbjct: 208 KFEYLIYVSTNYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVCWMKGT 387
Query: 121 GFHKVFAEGTKLIVIPSDKR 140
+ K+FA+GTKL+VIP DKR
Sbjct: 388 SWVKIFAKGTKLVVIPPDKR 447
>gb|M34974.1|MUSTGVJCF Mouse (clone RAG14) T-cell receptor rearranged gamma-chain mRNA
V1-J4-C4 region, 5' end
Length = 447
Score = 233 bits (594), Expect = 2e-59
Identities = 113/140 (80%), Positives = 126/140 (89%)
Frame = +1
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLLRWFTSCCLWVFGLGQLEQTELSVTR TDE+ QISCIV LPYFSNTAIHWYRQK +
Sbjct: 31 MLLLRWFTSCCLWVFGLGQLEQTELSVTRATDESAQISCIVSLPYFSNTAIHWYRQKA-K 207
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 120
+FEYLIYV+TNYNQRPLGGK+KKIEASKDF++STSTL+INYLKKEDEATYYCA +
Sbjct: 208 KFEYLIYVSTNYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVCWIRGT 387
Query: 121 GFHKVFAEGTKLIVIPSDKR 140
+ K+FA+GTKL+VIP DKR
Sbjct: 388 SWVKIFAKGTKLVVIPPDKR 447
>gb|AF021335.1|AF021335 Mus musculus T cell receptor gamma locus, TCR gamma 2 and gamma 4
gene clusters
Length = 62031
Score = 232 bits (592), Expect = 3e-59
Identities = 110/111 (99%), Positives = 111/111 (99%)
Frame = -1
Query: 137 SDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQE 196
+DKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQE
Sbjct: 7308 TDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQE 7129
Query: 197 GDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK 247
GDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK
Sbjct: 7128 GDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK 6976
Score = 210 bits (535), Expect = 1e-52
Identities = 104/120 (86%), Positives = 105/120 (86%), Gaps = 9/120 (7%)
Frame = -3
Query: 7 FTSCC---------LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQK 57
F CC L GLGQLEQTELSVTR+TDENVQISCIVYLPYFSNTAIHWYRQK
Sbjct: 36688 FFKCCFLCS*ELFPLLAVGLGQLEQTELSVTRETDENVQISCIVYLPYFSNTAIHWYRQK 36509
Query: 58 TNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMS 117
TNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA WMS
Sbjct: 36508 TNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCAVWMS 36329
Score = 187 bits (474), Expect = 1e-45
Identities = 87/112 (77%), Positives = 95/112 (84%)
Frame = +3
Query: 136 PSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQ 195
P+DKR D+D SPKPTIFLPS AETNLHK GTYLCLLEKFFP+VIRVYWKEK+G IL+SQ
Sbjct: 44307 PTDKRTDSDFSPKPTIFLPSAAETNLHKAGTYLCLLEKFFPEVIRVYWKEKDGEKILESQ 44486
Query: 196 EGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK 247
EG+T+KT YMKFSWLTV E +M KEHSCIVKHENNK G DQEI FP I K
Sbjct: 44487 EGNTIKTNDRYMKFSWLTVTEDSMAKEHSCIVKHENNKRGVDQEILFPPIGK 44642
Score = 180 bits (456), Expect(2) = 2e-46
Identities = 87/106 (82%), Positives = 98/106 (92%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L GLGQLEQTELSVTR+TDE+ QISCIV LPYFSNTAIHWYRQK ++FEYLIYV+TN
Sbjct: 39897 LLAVGLGQLEQTELSVTRETDESAQISCIVSLPYFSNTAIHWYRQKA-KKFEYLIYVSTN 40073
Query: 72 YNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMS 117
YNQRPLGGK+KKIEASKDF++STSTL+INYLKKEDEATYYCA W++
Sbjct: 40074 YNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVWIN 40211
Score = 59.7 bits (143), Expect = 3e-07
Identities = 31/47 (65%), Positives = 31/47 (65%)
Frame = -3
Query: 258 DVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
DVLQFQF VIYLAIISFSLLRRTSVCGNEKKS
Sbjct: 4957 DVLQFQFTSTSAYYTYLLLLLKSVIYLAIISFSLLRRTSVCGNEKKS 4817
Score = 48.1 bits (113), Expect(2) = 6e-07
Identities = 22/31 (70%), Positives = 25/31 (79%)
Frame = +1
Query: 56 QKTNQQFEYLIYVATNYNQRPLGGKHKKIEA 86
+KTNQQ EYLI+V T YNQ LGGK KK+EA
Sbjct: 38731 KKTNQQIEYLIHVWTKYNQHHLGGKKKKVEA 38823
Score = 45.8 bits (107), Expect = 0.004
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = -1
Query: 118 DSSGFHKVFAEGTKLIVIPSDKRL 141
DSSGFHKVFAEGTKLIVIPS K L
Sbjct: 11058 DSSGFHKVFAEGTKLIVIPSGKYL 10987
Score = 38.1 bits (87), Expect = 0.93
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
Frame = -1
Query: 1 MLLLRWFTSCCLWV-----FGLGQLEQTELSVT 28
MLLLRWFTSCCLWV G G E +S++
Sbjct: 36783 MLLLRWFTSCCLWVCKWTFLGAGDSELILISIS 36685
Score = 31.2 bits (69), Expect(2) = 2e-46
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1
Query: 1 MLLLRWFTSCCLWV 14
MLLLRW T CCLWV
Sbjct: 39772 MLLLRWPTFCCLWV 39813
Score = 30.0 bits (66), Expect(2) = 6e-07
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2
Query: 37 ISCIVYLPYFSNTAI 51
ISCIV LPYFSNT I
Sbjct: 38681 ISCIVSLPYFSNTVI 38725
>gb|M12834.1|MUSTCGGB1 Mouse T-cell receptor germline gamma chain gene C-region (C10.5)
Length = 643
Score = 232 bits (592), Expect = 3e-59
Identities = 110/111 (99%), Positives = 111/111 (99%)
Frame = +3
Query: 137 SDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQE 196
+DKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQE
Sbjct: 111 TDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQE 290
Query: 197 GDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK 247
GDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK
Sbjct: 291 GDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK 443
>gb|M34975.1|MUSTGVJCG Mouse (clone RAG43) T-cell receptor rearranged gamma-chain mRNA
V1-J4-C4 region, 5' end
Length = 444
Score = 231 bits (590), Expect = 4e-59
Identities = 115/141 (81%), Positives = 128/141 (90%), Gaps = 1/141 (0%)
Frame = +1
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLLRWFTSCCLWVFGLGQLEQTELSVTR TDE+ QISCIV LPYFSNTAIHWYRQK +
Sbjct: 31 MLLLRWFTSCCLWVFGLGQLEQTELSVTRATDESAQISCIVSLPYFSNTAIHWYRQKA-K 207
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA-DWMSDS 119
+FEYLIYV+TNYNQRPLGGK+KKIEASKDF++STSTL+INYLKKEDEATYYCA W+ S
Sbjct: 208 KFEYLIYVSTNYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVCWIGTS 387
Query: 120 SGFHKVFAEGTKLIVIPSDKR 140
+ K+FA+GTKL+VIP DKR
Sbjct: 388 --WVKIFAKGTKLVVIPPDKR 444
>gb|M30894.1|HUMTCRGAD Human T-cell receptor Ti rearranged gamma-chain mRNA V-J-C region,
complete cds
Length = 1586
Score = 230 bits (587), Expect = 1e-58
Identities = 137/325 (42%), Positives = 174/325 (53%), Gaps = 40/325 (12%)
Frame = +3
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGG 79
LE SVTR T + I+C LP + HWY + + + L+Y +YN R +
Sbjct: 204 LEGRTKSVTRPTGSSAVITCD--LPVENAVYTHWYLHQEGKAPQRLLYY-DSYNSRVVLE 374
Query: 80 KHKKIEASKDFKSSTSTLE--INYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPS 137
E + S+ +L+ + L + D YYCA W + K+F GT L+V +
Sbjct: 375 SGISREKYHTYASTGKSLKFILENLIERDSGVYYCATW---KDYYKKLFGSGTTLVV--T 539
Query: 138 DKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEG 197
DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I+++W+EK NTIL SQEG
Sbjct: 540 DKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKIHWQEKKSNTILGSQEG 719
Query: 198 DTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATTC----- 252
+T+KT TYMKFSWLTVPE ++ KEH CIV+HENNK G DQEI FP IK TT
Sbjct: 720 NTMKTNDTYMKFSWLTVPEESLDKEHRCIVRHENNKNGIDQEIIFPPIKTDVTTVDPKDS 899
Query: 253 --------------------------------W-QDKNDVLQFQFXXXXXXXXXXXXXXX 279
W +D ND L Q
Sbjct: 900 YSKDANDVTTVDPKYNYSKDANDVITMDPKDNWSKDANDTLLLQLTNTSAYYMYLLLLLK 1079
Query: 280 XVIYLAIISFSLLRRTSVCGNEKKS 304
V+Y AII+ LL RT+ C N +KS
Sbjct: 1080SVVYFAIITCCLLGRTAFCCNGEKS 1154
>gb|M13340.1|MUSTCGXF3 Mouse T-cell receptor rearranged gamma-chain C1-region gene, exon
1, clone TC-17
Length = 372
Score = 224 bits (570), Expect = 9e-57
Identities = 106/111 (95%), Positives = 108/111 (96%)
Frame = +1
Query: 137 SDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQE 196
+DKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEK+GNTILDSQE
Sbjct: 25 TDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKDGNTILDSQE 204
Query: 197 GDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK 247
GDTLKT TYMKFSWLTVPERAMGKEH CIVKHENNKGGADQEIFFPSIKK
Sbjct: 205 GDTLKTNDTYMKFSWLTVPERAMGKEHRCIVKHENNKGGADQEIFFPSIKK 357
>gb|AF037352.1|AF037352 Mus musculus T cell receptor gamma locus, TCR gamma 1 and gamma 3 gene
clusters
Length = 105726
Score = 224 bits (570), Expect = 9e-57
Identities = 106/111 (95%), Positives = 108/111 (96%)
Frame = +1
Query: 137 SDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQE 196
+DKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEK+GNTILDSQE
Sbjct: 37354 TDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKDGNTILDSQE 37533
Query: 197 GDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK 247
GDTLKT TYMKFSWLTVPERAMGKEH CIVKHENNKGGADQEIFFPSIKK
Sbjct: 37534 GDTLKTNDTYMKFSWLTVPERAMGKEHRCIVKHENNKGGADQEIFFPSIKK 37686
Score = 182 bits (463), Expect(2) = 2e-44
Identities = 88/106 (83%), Positives = 96/106 (90%)
Frame = +2
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L GLGQLEQTELSVTR TDE+ QISCIV LP FSNTAIHWYRQK NQQFEYLIYV TN
Sbjct: 66236 LLAVGLGQLEQTELSVTRATDESAQISCIVSLPCFSNTAIHWYRQKPNQQFEYLIYVETN 66415
Query: 72 YNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMS 117
YNQ+PLGGK+KKIEASKDF++STSTL+INYLKKEDEATYYCA W++
Sbjct: 66416 YNQQPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVWIN 66553
Score = 163 bits (413), Expect(2) = 2e-44
Identities = 76/85 (89%), Positives = 81/85 (94%)
Frame = +1
Query: 137 SDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQE 196
+DK+LDADISPKPTIFLPSVAETNLHKTGTYLC+LEKFFPDVIRVYWKEK GNTILDSQE
Sbjct: 84142 TDKKLDADISPKPTIFLPSVAETNLHKTGTYLCVLEKFFPDVIRVYWKEKKGNTILDSQE 84321
Query: 197 GDTLKTKGTYMKFSWLTVPERAMGK 221
GD LKT TYMKFSWLTVPER+MG+
Sbjct: 84322 GDMLKTNDTYMKFSWLTVPERSMGQ 84396
Score = 99.4 bits (246), Expect = 3e-19
Identities = 50/102 (49%), Positives = 67/102 (65%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L G G+LEQ E+S++R DE QISC V++ F + IHWYRQK NQ E+L+YV
Sbjct: 8445 LLAVGHGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLAT 8624
Query: 72 YNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA 113
L ++KK+EASK+ +STS L I L++EDEA YYC+
Sbjct: 8625 PTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCS 8750
Score = 57.0 bits (136), Expect = 2e-06
Identities = 30/47 (63%), Positives = 30/47 (63%)
Frame = +1
Query: 258 DVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
DVLQ QF VIYLAIISFSLLRRTSVCGNEKKS
Sbjct: 39730 DVLQLQFTITSAYYTYLLLLLKSVIYLAIISFSLLRRTSVCGNEKKS 39870
Score = 55.8 bits (133), Expect = 4e-06
Identities = 31/96 (32%), Positives = 47/96 (48%)
Frame = +3
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGG 79
+ Q +LS TR+ ++ V ISC + NT +HWY+ K + + Y + ++
Sbjct: 15687 ISQDQLSFTRRPNKTVHISCKLSGVPLHNTIVHWYQLKEGEPLRRIFYGSVKTYKQDKSH 15866
Query: 80 KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW 115
+I+ D T L IN + DEATYYCA W
Sbjct: 15867 SRLEIDEKDD---GTFYLIINNVVTSDEATYYCACW 15965
Score = 53.5 bits (127), Expect = 2e-05
Identities = 29/47 (61%), Positives = 29/47 (61%)
Frame = +2
Query: 258 DVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
DVLQ QF VIYLAIISFSLLRRTSVC NEKKS
Sbjct: 86540 DVLQLQFTITSAYYTYLLLLLKSVIYLAIISFSLLRRTSVCCNEKKS 86680
Score = 45.8 bits (107), Expect = 0.004
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +1
Query: 118 DSSGFHKVFAEGTKLIVIPSDKRL 141
DSSGFHKVFAEGTKLIVIPS K L
Sbjct: 33598 DSSGFHKVFAEGTKLIVIPSGKYL 33669
Score = 40.8 bits (94), Expect(2) = 2e-44
Identities = 18/27 (66%), Positives = 19/27 (69%)
Frame = +3
Query: 221 KEHSCIVKHENNKGGADQEIFFPSIKK 247
K + HE NKGGADQEIFFP IKK
Sbjct: 84396 KSTDVLSNHETNKGGADQEIFFPPIKK 84476
Score = 40.4 bits (93), Expect = 0.19
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +1
Query: 118 DSSGFHKVFAEGTKLIVIPSDKRL 141
DS FHKVFAEGTKLIVIPS K L
Sbjct: 80377 DSWDFHKVFAEGTKLIVIPSGKYL 80448
Score = 35.4 bits (80), Expect = 6.0
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Frame = +1
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIY---------VAT 70
LE+ +S+T+ + ++C + + T IHWYR + + E+L+Y V +
Sbjct: 1474 LEERIMSITKLEGSSAIMTCDTHR---TGTYIHWYRFQKGRAPEHLLYYNFVSSTTVVDS 1644
Query: 71 NYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW 115
+N L H K +K + +++ D A YYCA W
Sbjct: 1645 RFN---LEKYHVYEGPDKRYK-----FVLRNVEESDSALYYCASW 1755
Score = 21.9 bits (45), Expect(2) = 2e-44
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 159 TNLHKTGTYLC 169
TNLHK YLC
Sbjct: 66573 TNLHKNHPYLC 66605
>gb|M13231.1|HUMTCGXH Human T-cell receptor aberrantly rearranged gamma-chain mRNA from
cell line HPB-MLT
Length = 1421
Score = 208 bits (530), Expect(2) = 1e-56
Identities = 108/205 (52%), Positives = 130/205 (62%), Gaps = 22/205 (10%)
Frame = +2
Query: 122 FHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRV 181
+ K+F GT L+V +DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I++
Sbjct: 368 YKKLFGSGTTLVV--TDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKI 541
Query: 182 YWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIF 241
+W+EK NTIL SQEG+T+KT TYMKFSWLTVPE ++ KEH CIV+HENNK G DQEI
Sbjct: 542 HWQEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEESLDKEHRCIVRHENNKNGIDQEII 721
Query: 242 FPSIKKVATTC---------------------W-QDKNDVLQFQFXXXXXXXXXXXXXXX 279
FP IK TT W +D ND L Q
Sbjct: 722 FPPIKTDVTTVDPKDSYSKDANDVITMDPKDNWSKDANDTLLLQLTNTSAYYMYLLLLLK 901
Query: 280 XVIYLAIISFSLLRRTSVCGNEKKS 304
V+Y AII+ LL RT+ C N +KS
Sbjct: 902 SVVYFAIITCCLLGRTAFCCNGEKS 976
Score = 36.6 bits (83), Expect(2) = 1e-56
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +1
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTA-IHWYRQKTNQQFEYLIY--VATNYNQRP 76
LE SVTRQT + +I+C + + +NT IHWY + + + L+Y V+T +
Sbjct: 67 LEGRTKSVTRQTGSSAEITCDLTV---TNTFYIHWYLHQEGKAPQRLLYYDVSTARDVLE 237
Query: 77 LGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW 115
G K + S L + L + D YYCA W
Sbjct: 238 SGLSPGKYYTHTPRRWSW-ILRLQNLIENDSGVYYCATW 351
>gb|AF151103.1|AF151103 Homo sapiens TCRgamma alternate reading frame protein (TCRg) mRNA,
complete cds
Length = 1027
Score = 221 bits (564), Expect = 5e-56
Identities = 111/187 (59%), Positives = 131/187 (69%), Gaps = 6/187 (3%)
Frame = +1
Query: 124 KVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYW 183
KVF GTKLI+ +DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPDVI+++W
Sbjct: 25 KVFGPGTKLII--TDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHW 198
Query: 184 KEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFP 243
+EK NTIL SQEG+T+KT TYMKFSWLTVPE+++ KEH CIV+HENNK G DQEI FP
Sbjct: 199 QEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSLDKEHRCIVRHENNKNGVDQEIIFP 378
Query: 244 SIKKVATT------CWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSV 297
IK T C +D ND L Q V+Y AII+ LLRRT+
Sbjct: 379 PIKTDVITMDPKDNCSKDANDTLLLQLTNTSAYYMYLLLLLKSVVYFAIITCCLLRRTAF 558
Query: 298 CGNEKKS 304
C N +KS
Sbjct: 559 CCNGEKS 579
>ref|XM_088188.1| Homo sapiens similar to T cell receptor gamma chain (LOC155236),
mRNA
Length = 1016
Score = 221 bits (564), Expect = 5e-56
Identities = 111/187 (59%), Positives = 131/187 (69%), Gaps = 6/187 (3%)
Frame = +2
Query: 124 KVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYW 183
KVF GTKLI+ +DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPDVI+++W
Sbjct: 14 KVFGPGTKLII--TDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHW 187
Query: 184 KEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFP 243
+EK NTIL SQEG+T+KT TYMKFSWLTVPE+++ KEH CIV+HENNK G DQEI FP
Sbjct: 188 QEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSLDKEHRCIVRHENNKNGVDQEIIFP 367
Query: 244 SIKKVATT------CWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSV 297
IK T C +D ND L Q V+Y AII+ LLRRT+
Sbjct: 368 PIKTDVITMDPKDNCSKDANDTLLLQLTNTSAYYMYLLLLLKSVVYFAIITCCLLRRTAF 547
Query: 298 CGNEKKS 304
C N +KS
Sbjct: 548 CCNGEKS 568
>gb|M30172.1|MUSTCGXJ Mouse T-cell receptor beta-chain mRNA V2-J2 region, 3' end
Length = 353
Score = 200 bits (508), Expect(2) = 2e-55
Identities = 95/98 (96%), Positives = 97/98 (98%)
Frame = +1
Query: 19 QLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG 78
QLEQTELSVTR+TDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG
Sbjct: 1 QLEQTELSVTRETDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG 180
Query: 79 GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWM 116
GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA W+
Sbjct: 181 GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCAVWI 294
Score = 41.2 bits (95), Expect(2) = 2e-55
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 119 SSGFHKVFAEGTKLIVIPS 137
SSGFHKVFAEGTKLIVIPS
Sbjct: 296 SSGFHKVFAEGTKLIVIPS 352
>gb|M12837.1|MUSTCGGC1 Mouse T-cell receptor germline gamma chain gene C7.5-region
Length = 545
Score = 216 bits (551), Expect = 1e-54
Identities = 101/111 (90%), Positives = 106/111 (94%)
Frame = +3
Query: 137 SDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQE 196
+DK+LDADISPKPTIFLPSVAETNLHKTGTYLC+LEKFFPDVIRVYWKEK GNTILDSQE
Sbjct: 12 TDKKLDADISPKPTIFLPSVAETNLHKTGTYLCVLEKFFPDVIRVYWKEKKGNTILDSQE 191
Query: 197 GDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK 247
GD LKT TYMKFSWLTVPER+MGKEH CIVKHENNKGGADQEIFFP+IKK
Sbjct: 192 GDMLKTNDTYMKFSWLTVPERSMGKEHRCIVKHENNKGGADQEIFFPTIKK 344
>gb|BC017861.1|BC017861 Homo sapiens, Similar to T cell receptor gamma locus, clone
IMAGE:4687960, mRNA
Length = 1510
Score = 216 bits (549), Expect = 2e-54
Identities = 113/217 (52%), Positives = 135/217 (62%), Gaps = 22/217 (10%)
Frame = +1
Query: 110 YYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLC 169
Y +DW+ K FA+GT+LIV DK+LDAD+SPKPTIFLPS+AET L K GTYLC
Sbjct: 403 YIGSDWI-------KTFAKGTRLIVTSPDKQLDADVSPKPTIFLPSIAETKLQKAGTYLC 561
Query: 170 LLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKH 229
LLEKFFPD+I+++W+EK NTIL SQEG+T+KT TYMKFSWLTVPE ++ KEH CIV+H
Sbjct: 562 LLEKFFPDIIKIHWQEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEESLDKEHRCIVRH 741
Query: 230 ENNKGGADQEIFFPSIKKVATTC---------------------W-QDKNDVLQFQFXXX 267
ENNK G DQEI FP IK TT W +D ND L Q
Sbjct: 742 ENNKNGIDQEIIFPPIKTDVTTVDPKYNYSKDANDVITMDPKDNWSKDANDTLLLQLTNT 921
Query: 268 XXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
V+Y AII+ LL RT+ C N +KS
Sbjct: 922 SAYYMYLLLLLKSVVYFAIITCCLLGRTAFCCNGEKS 1032
Score = 42.4 bits (98), Expect = 0.049
Identities = 43/195 (22%), Positives = 71/195 (36%), Gaps = 17/195 (8%)
Frame = +2
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGG 79
LE SVTR T + I+C LP + HWY + + + L+Y +YN R +
Sbjct: 101 LEGRTKSVTRPTGSSAVITCD--LPVENAVYTHWYLHQEGKAPQRLLYY-DSYNSRVVLE 271
Query: 80 KHKKIEASKDFKSSTSTLE--INYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPS 137
E + S+ +L+ + L + D YYCA W G ++V+
Sbjct: 272 SGISREKYHTYASTGKSLKFILENLIERDSGVYYCATWDRWGKG----------ILVVIG 421
Query: 138 DKRLDADIS---------------PKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVY 182
+RL + P P F + + N + L F ++R
Sbjct: 422 SRRLQKGLGS**LRLINNLMQMFPPSPLFFFLRLLKQNSRRLEHTFVFLRNFSQILLRYI 601
Query: 183 WKEKNGNTILDSQEG 197
K++ D + G
Sbjct: 602 GKKRRATRFWDPRRG 646
>gb|M26764.1|MUSG2VJ Mus musculus rearranged T-cell receptor gamma-2 chain gene,
variable and joining segments
Length = 428
Score = 213 bits (541), Expect = 2e-53
Identities = 110/142 (77%), Positives = 119/142 (83%), Gaps = 2/142 (1%)
Frame = +1
Query: 2 LLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQ 61
LL+R F + GLGQLEQTELSVTR+ DE+ QISCIV LPYFSNTAIHWYRQK NQQ
Sbjct: 7 LLMRTFPFATV---GLGQLEQTELSVTREQDESAQISCIVSLPYFSNTAIHWYRQKPNQQ 177
Query: 62 FEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS- 120
FEYLIYV TNYNQRPLGGK+KKIEASKDF++STSTLEINYLKKEDEATYYCA W+ S
Sbjct: 178 FEYLIYVETNYNQRPLGGKNKKIEASKDFQTSTSTLEINYLKKEDEATYYCAVWIGGSG* 357
Query: 121 -GFHKVFAEGTKLIVIPSDKRL 141
G +VFAEGTKLIVIPS K L
Sbjct: 358 LGLSQVFAEGTKLIVIPSGKYL 423
>gb|M27334.1|HUMTCRGAAD Homo sapiens (clone HGP02) T cell receptor gamma-chain mRNA, C1
region
Length = 958
Score = 211 bits (536), Expect = 8e-53
Identities = 103/173 (59%), Positives = 121/173 (69%), Gaps = 6/173 (3%)
Frame = +1
Query: 138 DKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEG 197
DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPDVI+++W+EK NTIL SQEG
Sbjct: 1 DKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHWEEKKSNTILGSQEG 180
Query: 198 DTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATT------ 251
+T+KT TYMKFSWLTVPE+++ KEH CIV+HENNK G DQEI FP IK T
Sbjct: 181 NTMKTNDTYMKFSWLTVPEKSLDKEHRCIVRHENNKNGVDQEIIFPPIKTDVITMDPKDN 360
Query: 252 CWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
C +D ND L Q V+Y AII+ LLRRT+ C N +KS
Sbjct: 361 CSKDANDTLLLQLTNTSAYYTYLLLLLKSVVYFAIITCCLLRRTAFCCNGEKS 519
>gb|M12831.1|MUSTCGGA2 Mouse T-cell receptor germline gamma chain gene V-region (V108A)
Length = 990
Score = 210 bits (535), Expect = 1e-52
Identities = 104/120 (86%), Positives = 105/120 (86%), Gaps = 9/120 (7%)
Frame = +3
Query: 7 FTSCC---------LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQK 57
F CC L GLGQLEQTELSVTR+TDENVQISCIVYLPYFSNTAIHWYRQK
Sbjct: 468 FFKCCFLCS*ELFPLLAVGLGQLEQTELSVTRETDENVQISCIVYLPYFSNTAIHWYRQK 647
Query: 58 TNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMS 117
TNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA WMS
Sbjct: 648 TNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCAVWMS 827
Score = 38.1 bits (87), Expect = 0.93
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
Frame = +1
Query: 1 MLLLRWFTSCCLWV-----FGLGQLEQTELSVT 28
MLLLRWFTSCCLWV G G E +S++
Sbjct: 373 MLLLRWFTSCCLWVCKWTFLGAGDSELILISIS 471
>gb|L21160.1|PIGTCRG4C Pig T-cell receptor gamma4 chain mRNA C-region, 3' end of cds
Length = 978
Score = 207 bits (527), Expect = 9e-52
Identities = 98/169 (57%), Positives = 119/169 (69%), Gaps = 2/169 (1%)
Frame = +1
Query: 138 DKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEG 197
D+ L AD+SPKPTIFLPS+AE NLH TGT+LCLLEKFFPD I+VYWKEKNGNT+LDSQ+G
Sbjct: 1 DRNLAADMSPKPTIFLPSIAEINLHNTGTHLCLLEKFFPDAIKVYWKEKNGNTVLDSQQG 180
Query: 198 DTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATT--CWQD 255
D ++T TYMKFSWLTV +++ KEH CIVKHENNK G DQEI FPS+ K TT C +D
Sbjct: 181 DVIQTNDTYMKFSWLTVTQKSADKEHICIVKHENNKRGTDQEILFPSMNKEVTTDVCLKD 360
Query: 256 KNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
+ +Q Q +Y AII++ L R T+VC K+S
Sbjct: 361 TSGTMQLQLTNTSAYYTYLLLLLKSALYFAIITYCLFRETTVCSAWKRS 507
>emb|X15019.1|HSTRGGC1 Human CII mRNA for T-cell receptor gamma (GC12) V-J(gamma)2
Length = 817
Score = 205 bits (521), Expect = 4e-51
Identities = 112/240 (46%), Positives = 146/240 (60%), Gaps = 10/240 (4%)
Frame = +2
Query: 31 TDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIEASKDF 90
T + +I+C L + IHWY + + + L+Y + ++ L + K +
Sbjct: 2 TRSSAEITCD--LTVINAFYIHWYLHQEGKAPQRLLYYDVSNSKDVL---ESGLSPGKYY 166
Query: 91 KSSTST----LEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADIS 146
+ L + L + D YYCA W K+F GT L+V +DK+LDAD+S
Sbjct: 167 THTPRRWSWILILRNLIENDSGVYYCATWDRQDK---KLFGSGTTLVV--TDKQLDADVS 331
Query: 147 PKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKTKGTY 206
PKPTIFLPS+AET L K GTYLCLLEKFFPD+I+++W+EK NTIL SQEG+ +KT TY
Sbjct: 332 PKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKIHWQEKKSNTILGSQEGNNMKTNDTY 511
Query: 207 MKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATTC------WQDKNDVL 260
MKFSWLTVPE ++ KEH CIV+HENNK G DQEI FP IK TT +D NDV+
Sbjct: 512 MKFSWLTVPEESLDKEHRCIVRHENNKNGIDQEIIFPPIKTDVTTVDPKYNYSKDANDVI 691
>emb|Z13986.1|OATCCG5 O.aries rearranged T-cell receptor gamma
Length = 559
Score = 203 bits (517), Expect = 1e-50
Identities = 100/177 (56%), Positives = 121/177 (67%), Gaps = 2/177 (1%)
Frame = +1
Query: 128 EGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKN 187
EGTKL+VIP D+RLD D+ PKPTIF PSV E H GT+LCLL+ FFPD I+V WKEKN
Sbjct: 1 EGTKLVVIPPDRRLDGDLFPKPTIFFPSVEEVKRHSAGTHLCLLQNFFPDAIKVQWKEKN 180
Query: 188 GNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFF-PSIK 246
GNTIL+S +G+ +KT TYMKFSWLT+ ++AMGKEH CIVKHENNKGG DQEI F P K
Sbjct: 181 GNTILESHQGNIIKTNDTYMKFSWLTLTKKAMGKEHVCIVKHENNKGGRDQEILFSPVNK 360
Query: 247 KVAT-TCWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEK 302
+VAT C + +D LQ QF +IY +II+F + R + N K
Sbjct: 361 EVATHACMKKGSDTLQLQFASTSAYYTYLLLLLKSMIYFSIIAFCVFWRIGIFSNGK 531
>emb|X06775.1|HSTRGC10 Human aberrant mRNA from TRG gamma gene with unrearranged J(g)2
spliced onto C(g)2
Length = 720
Score = 203 bits (516), Expect = 2e-50
Identities = 108/221 (48%), Positives = 131/221 (58%), Gaps = 38/221 (17%)
Frame = +1
Query: 122 FHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRV 181
+ K+F GT L+V +DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I++
Sbjct: 49 YKKLFGSGTTLVV--TDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKI 222
Query: 182 YWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIF 241
+W+EK NTIL SQEG+T+KT TYMKFSWLTVPE ++ KEH CIV+HENNK G DQEI
Sbjct: 223 HWQEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEESLDKEHRCIVRHENNKNGIDQEII 402
Query: 242 FPSIKKVATTC-------------------------------------W-QDKNDVLQFQ 263
FP IK TT W ++ ND L Q
Sbjct: 403 FPPIKTDVTTVDPKDSYSKDANDVTTVDPKYNYSKDANDVTTMDPKDNWSKNANDTLLLQ 582
Query: 264 FXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
V+Y AII+ LLRRT+ C N +KS
Sbjct: 583 LTNTSAYYMYLLLLLKSVVYFAIITCCLLRRTAFCCNGEKS 705
>emb|Z22846.1|MMTCRVJAT M.musculus T cell receptor V gamma 2 and T cell receptor J gamma 2
mRNA
Length = 309
Score = 203 bits (516), Expect = 2e-50
Identities = 99/104 (95%), Positives = 101/104 (96%)
Frame = +1
Query: 19 QLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG 78
QLEQTELSVTR+TDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG
Sbjct: 1 QLEQTELSVTRETDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG 180
Query: 79 GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGF 122
GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA W+ SSGF
Sbjct: 181 GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCAVWIG-SSGF 309
>gb|M77018.1|MUSTCGB M.musculus immunoglobulin rearranged T cell receptor gamma chain
mRNA, partial cds
Length = 294
Score = 201 bits (512), Expect = 5e-50
Identities = 96/98 (97%), Positives = 97/98 (98%)
Frame = +1
Query: 19 QLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG 78
QLEQTELSVTR+TDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG
Sbjct: 1 QLEQTELSVTRETDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG 180
Query: 79 GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWM 116
GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA WM
Sbjct: 181 GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCAVWM 294
>emb|X74774.1|HSTCRGP2 H.sapiens mRNA for TCR gamma V10 pseudogene
Length = 697
Score = 200 bits (509), Expect = 1e-49
Identities = 97/181 (53%), Positives = 130/181 (71%), Gaps = 2/181 (1%)
Frame = +2
Query: 16 GLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYN-- 73
GL ++EQ +LS++ + +++ I C + F IHWYRQK NQ E+LIY+ + +
Sbjct: 161 GLSKVEQFQLSISTEVKKSIDIPCKISSTRFETDVIHWYRQKPNQALEHLIYIVSTKSAA 340
Query: 74 QRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLI 133
+R +G K+EA K+ ++ TS L I ++KED A YYCA W D++G+ K+FAEGTKLI
Sbjct: 341 RRSMGKTSNKVEARKNSQTLTSILTIKSVEKEDMAVYYCAAW--DTTGWFKIFAEGTKLI 514
Query: 134 VIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILD 193
V DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPDVI+++W+EK NTIL
Sbjct: 515 VTSPDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHWQEKKSNTILG 694
Query: 194 S 194
S
Sbjct: 695 S 697
>gb|M27331.1|HUMTCRGAAA Homo sapiens (clone HGP08) T cell receptor gamma-chain mRNA, C2
region
Length = 1013
Score = 199 bits (507), Expect = 2e-49
Identities = 102/189 (53%), Positives = 120/189 (62%), Gaps = 22/189 (11%)
Frame = +1
Query: 138 DKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEG 197
DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I+++W+EK NTIL SQEG
Sbjct: 1 DKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKIHWQEKKSNTILGSQEG 180
Query: 198 DTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATTC----- 252
+T+KT TYMKFSWLTVPE ++ KEH CIV+HENNK G DQEI FP IK TT
Sbjct: 181 NTMKTNDTYMKFSWLTVPEESLDKEHRCIVRHENNKNGIDQEIIFPPIKTDVTTVDPKYN 360
Query: 253 ----------------W-QDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRT 295
W +D ND L Q V+Y AII+ LL RT
Sbjct: 361 YSKDANDVITMDPKDNWSKDANDTLLLQLTNTSAYYMYLLLLLKSVVYFAIITCCLLGRT 540
Query: 296 SVCGNEKKS 304
+ C N +KS
Sbjct: 541 AFCCNGEKS 567
>gb|M26763.1|MUSG1V Mus musculus germline T-cell receptor gamma-1 chain gene, variable
segment
Length = 413
Score = 199 bits (507), Expect = 2e-49
Identities = 101/130 (77%), Positives = 115/130 (87%)
Frame = +2
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L GLGQLEQTELSVTR+TDE+ QISCIV LPYFSNTAIHWYRQK ++FEYLIYV+TN
Sbjct: 29 LLAVGLGQLEQTELSVTRETDESAQISCIVSLPYFSNTAIHWYRQKA-KKFEYLIYVSTN 205
Query: 72 YNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTK 131
YNQRPLGGK+KKIEASKDF++STSTLEINYLKKEDEATYYCA W+ +S + K+FA+GTK
Sbjct: 206 YNQRPLGGKNKKIEASKDFQTSTSTLEINYLKKEDEATYYCAVWI*GTS-WVKIFAKGTK 382
Query: 132 LIVIPSDKRL 141
L+VIP K L
Sbjct: 383 LVVIPPGKLL 412
>gb|M17325.1|HUMTCGCJ Homo sapiens T-cell receptor gamma-chain constant region (TCRGC1)
mRNA, partial cds
Length = 757
Score = 198 bits (503), Expect = 5e-49
Identities = 97/166 (58%), Positives = 114/166 (68%), Gaps = 6/166 (3%)
Frame = +1
Query: 145 ISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKTKG 204
+SPKPTIFLPS+AET L K GTYLCLLEKFFPDVI+++W+EK NTIL SQEG+T+KT
Sbjct: 1 VSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHWQEKKSNTILGSQEGNTMKTND 180
Query: 205 TYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATT------CWQDKND 258
TYMKFSWLTVPE+++ KEH CIV+HENNK G DQEI FP IK T C +D ND
Sbjct: 181 TYMKFSWLTVPEKSLDKEHRCIVRHENNKNGVDQEIIFPPIKTDVITMDPKDNCSKDAND 360
Query: 259 VLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
L Q V+Y AII+ LLRRT+ C N +KS
Sbjct: 361 TLLLQLTNTSAYYMYLLLLLKSVVYFAIITCCLLRRTAFCCNGEKS 498
>emb|X06776.1|HSTRGC54 Human truncated mRNA from TRG gamma gene V(g)8-J(g)P2-C(g)2 with
nonproductive V-J arrangement
Length = 635
Score = 197 bits (502), Expect = 7e-49
Identities = 90/125 (72%), Positives = 105/125 (84%)
Frame = +3
Query: 124 KVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYW 183
K FA+GT+LIV DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I+++W
Sbjct: 234 KTFAKGTRLIVTSPDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKIHW 413
Query: 184 KEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFP 243
+EK NTIL SQEG+T+KT TYMKFSWLTVPE ++ KEH CIV+HENNK G DQEI FP
Sbjct: 414 QEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEESLDKEHRCIVRHENNKNGIDQEIIFP 593
Query: 244 SIKKV 248
IK V
Sbjct: 594 PIKTV 608
>gb|M27332.1|HUMTCRGAAB Homo sapiens (clone HGP06) T cell receptor gamma-chain mRNA, C2
region
Length = 1003
Score = 196 bits (497), Expect = 3e-48
Identities = 102/189 (53%), Positives = 120/189 (62%), Gaps = 22/189 (11%)
Frame = +1
Query: 138 DKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEG 197
DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I+++W+EK NTIL SQEG
Sbjct: 1 DKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKIHWQEKKSNTILGSQEG 180
Query: 198 DTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATTC----- 252
+T+KT TYMKFSWLTVPE ++ KEH CIV+HENNK G DQEI FP IK TT
Sbjct: 181 NTMKTNDTYMKFSWLTVPEESLDKEHRCIVRHENNKNGIDQEIIFPPIKTDVTTVDPKYN 360
Query: 253 ----------------W-QDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRT 295
W +D ND L Q V+Y AII+ LL RT
Sbjct: 361 YSKDANDVITMDPKDNWSKDANDTL-LQLTNTSAYYMYLLLLLKSVVYFAIITCCLLGRT 537
Query: 296 SVCGNEKKS 304
+ C N +KS
Sbjct: 538 AFCCNGEKS 564
>emb|Z13003.1|OATCVG3 O.aries rearranged T-cell receptor gamma
Length = 632
Score = 195 bits (496), Expect = 3e-48
Identities = 99/203 (48%), Positives = 133/203 (64%), Gaps = 4/203 (1%)
Frame = +3
Query: 4 LRWFTSCCLWVFGLG--QLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQ 61
L FT W GLG ++EQ ++S + + +++ I C + F + A++WYRQK +Q
Sbjct: 36 LEAFTFFSFWASGLGLSKVEQAQISPSTEVKKSITIHCKIESTDFESEAVYWYRQKRHQA 215
Query: 62 FEYLIYV--ATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDS 119
E+L+YV T + + GK+K IEA KD + TSTL +N+++KED YYCA W
Sbjct: 216 LEHLVYVISTTTAARHQVDGKNK-IEARKDARMFTSTLTVNFVEKEDVGIYYCAGWRKGI 392
Query: 120 SGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVI 179
KVF EGTKL+VIP D+RLD D+ PKPTIF PSV E H GT+LCLL+ FFPD I
Sbjct: 393 ----KVFGEGTKLVVIPPDRRLDGDLFPKPTIFFPSVEEVKRHSAGTHLCLLQNFFPDAI 560
Query: 180 RVYWKEKNGNTILDSQEGDTLKT 202
+V WKEKNGNTIL+S +G+ +KT
Sbjct: 561 KVQWKEKNGNTILESHQGNIIKT 629
>gb|M17324.1|HUMTCGCI Homo sapiens T-cell receptor gamma-chain constant region (TCRGC2)
mRNA, partial cds
Length = 600
Score = 194 bits (492), Expect = 1e-47
Identities = 100/188 (53%), Positives = 118/188 (62%), Gaps = 22/188 (11%)
Frame = +3
Query: 139 KRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGD 198
K+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I+++W+EK NTIL SQEG+
Sbjct: 3 KQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKIHWQEKKSNTILGSQEGN 182
Query: 199 TLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATTC------ 252
T+KT TYMKFSWLTVPE ++ KEH CIV+HENNK G DQEI FP IK TT
Sbjct: 183 TMKTNDTYMKFSWLTVPEESLDKEHRCIVRHENNKNGIDQEIIFPPIKTDVTTVDPKYNY 362
Query: 253 ---------------W-QDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTS 296
W +D D L Q +Y AII+ LLRRT+
Sbjct: 363 SKDANDVITMDPKDNWSKDAIDTLLLQLTNTSAYYMYLLLLLKSGVYFAIITCCLLRRTA 542
Query: 297 VCGNEKKS 304
C N +KS
Sbjct: 543 FCCNGEKS 566
>dbj|D90414.1|BOVBTG24 Bos taurus mRNA for T-cell receptor gamma chain, J and C regions,
clone:BTG24
Length = 1396
Score = 193 bits (491), Expect = 1e-47
Identities = 97/212 (45%), Positives = 124/212 (57%), Gaps = 27/212 (12%)
Frame = +2
Query: 120 SGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVI 179
+G+ K+F + T+LIV P D+ LD D+SPKPT+FLPS+ E TGTYLCLLE FFP VI
Sbjct: 347 AGWKKIFGKATELIVAPPDRDLDIDMSPKPTMFLPSITEIKRENTGTYLCLLENFFPHVI 526
Query: 180 RVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQE 239
+VYW+EK GN +L SQ+G+T+KT TYMKFSWLTV +M KEH CIVKHE NK G +QE
Sbjct: 527 KVYWREKRGNRVLPSQQGNTVKTADTYMKFSWLTVSGNSMDKEHICIVKHEKNKTGDNQE 706
Query: 240 IFFPSIKKVATT---------------------------CWQDKNDVLQFQFXXXXXXXX 272
I FP + +V T+ C +D+N+ LQ
Sbjct: 707 ILFPPVNEVVTSVVTATKPPNDGLKDKKKQVPVVNSTKACLKDENNTLQLHLMNTSAYYT 886
Query: 273 XXXXXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
+YL II+ + RRT VCG +K S
Sbjct: 887 YLLLLITSTVYLVIITSCVFRRTGVCGIQKSS 982
>gb|M17323.1|HUMTCGCH Homo sapiens T-cell receptor gamma-chain constant region (TCRGC2)
mRNA, partial cds
Length = 1046
Score = 191 bits (485), Expect = 7e-47
Identities = 101/204 (49%), Positives = 119/204 (57%), Gaps = 38/204 (18%)
Frame = +3
Query: 139 KRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGD 198
K+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I+++W+EK NTIL SQEG+
Sbjct: 3 KQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKIHWQEKKSNTILGSQEGN 182
Query: 199 TLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATTC------ 252
T+KT TYMKFSWLTVPE ++ KEH CIV+HENNK G DQEI FP IK TT
Sbjct: 183 TMKTNDTYMKFSWLTVPEESLDKEHRCIVRHENNKNGIDQEIIFPPIKTDVTTVDPKDSY 362
Query: 253 -------------------------------W-QDKNDVLQFQFXXXXXXXXXXXXXXXX 280
W +D ND L Q
Sbjct: 363 SKDANDVTTVDPKYNYSKDANDVITMDPKDNWSKDANDTLLLQLTNTSAYYMYLLLLLKS 542
Query: 281 VIYLAIISFSLLRRTSVCGNEKKS 304
V+Y AII+ LL RT+ C N +KS
Sbjct: 543 VVYFAIITCCLLGRTAFCCNGEKS 614
>emb|Z48589.1|MMTCRGBV2 M.musculus mRNA for T-cell receptor gammaB-V2 segment
Length = 296
Score = 189 bits (481), Expect = 2e-46
Identities = 90/98 (91%), Positives = 96/98 (97%)
Frame = +1
Query: 19 QLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG 78
QLEQTELSVTR+TDE+VQISCIV+LPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPL
Sbjct: 1 QLEQTELSVTRETDESVQISCIVFLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLE 180
Query: 79 GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWM 116
GK+KKIEASKDFK+STSTL+INYLKKEDEATYYCA WM
Sbjct: 181 GKNKKIEASKDFKTSTSTLKINYLKKEDEATYYCAVWM 294
>gb|M12832.1|MUSTCGGA1 Mouse T-cell receptor germline gamma chain gene V-region (V108B)
Length = 517
Score = 180 bits (456), Expect(2) = 2e-46
Identities = 87/106 (82%), Positives = 98/106 (92%)
Frame = +1
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L GLGQLEQTELSVTR+TDE+ QISCIV LPYFSNTAIHWYRQK ++FEYLIYV+TN
Sbjct: 133 LLAVGLGQLEQTELSVTRETDESAQISCIVSLPYFSNTAIHWYRQKA-KKFEYLIYVSTN 309
Query: 72 YNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMS 117
YNQRPLGGK+KKIEASKDF++STSTL+INYLKKEDEATYYCA W++
Sbjct: 310 YNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVWIN 447
Score = 31.2 bits (69), Expect(2) = 2e-46
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2
Query: 1 MLLLRWFTSCCLWV 14
MLLLRW T CCLWV
Sbjct: 8 MLLLRWPTFCCLWV 49
>emb|X63684.1|BTBTGT2 B.taurus BTGT2 mRNA for T cell receptor gamma chain
Length = 1014
Score = 188 bits (477), Expect = 6e-46
Identities = 95/172 (55%), Positives = 119/172 (68%), Gaps = 7/172 (4%)
Frame = +1
Query: 87 SKDF-KSSTSTLEINY-----LKKEDEATYYCADWMS-DSSGFHKVFAEGTKLIVIPSDK 139
SKDF K+S T + + L K + YC + DSSG+ K+F EG +IV P ++
Sbjct: 172 SKDFQKNSDQTASMKFFDF*SLYKGRKRLGYCRSFYHCDSSGWRKIFGEGANIIVTPPER 351
Query: 140 RLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGDT 199
L+AD SPKPT+FLPS+AE N GTYLCLLEKFFPDVI V W+ KN L SQ+G+T
Sbjct: 352 NLEADTSPKPTVFLPSIAEINHDNAGTYLCLLEKFFPDVITVSWRAKNDKRALPSQQGNT 531
Query: 200 LKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATT 251
+KTK TYMKFSWLT+ E +M K+H C+VKH+ N GG DQEI FPSIK+V T+
Sbjct: 532 MKTKDTYMKFSWLTMTENSMDKQHVCVVKHKKNIGGIDQEIIFPSIKEVVTS 687
>gb|AF159056.1|AF159056 Homo sapiens T-cell gamma receptor locus, complete sequence
Length = 140691
Score = 187 bits (475), Expect = 9e-46
Identities = 84/117 (71%), Positives = 99/117 (83%)
Frame = +2
Query: 130 TKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGN 189
T + +P DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPDVI+++W+EK N
Sbjct: 108212 THISFLPIDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHWQEKKSN 108391
Query: 190 TILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIK 246
TIL SQEG+T+KT TYMKFSWLTVPE+++ KEH CIV+HENNK G DQEI FP IK
Sbjct: 108392 TILGSQEGNTMKTNDTYMKFSWLTVPEKSLDKEHRCIVRHENNKNGVDQEIIFPPIK 108562
Score = 186 bits (471), Expect = 3e-45
Identities = 83/117 (70%), Positives = 98/117 (82%)
Frame = +1
Query: 130 TKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGN 189
T + +P DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I+++W+EK N
Sbjct: 124318 THISFLPIDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKIHWQEKKSN 124497
Query: 190 TILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIK 246
TIL SQEG+T+KT TYMKFSWLTVPE ++ KEH CIV+HENNK G DQEI FP IK
Sbjct: 124498 TILGSQEGNTMKTNDTYMKFSWLTVPEESLDKEHRCIVRHENNKNGIDQEIIFPPIK 124668
Score = 94.4 bits (233), Expect = 1e-17
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
Frame = +3
Query: 17 LGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRP 76
LGQLEQ E+S++R +++ IS + FS+ IHWY QK N+ EYL++V + +
Sbjct: 81990 LGQLEQPEISISRPANKSAHISWKASIQGFSSKIIHWYWQKPNKGLEYLLHVFLTISAQD 82169
Query: 77 L-GGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 120
GGK KK+E SK+ +STSTL+I +L+KEDE Y+CA W+ S
Sbjct: 82170 CSGGKTKKLEISKNAHTSTSTLKIKFLEKEDEVVYHCACWIRHHS 82304
Score = 86.7 bits (213), Expect = 2e-15
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Frame = +3
Query: 16 GLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYN-- 73
GL ++EQ +LS++ + +++ I C + F IHWYRQK NQ E+LIY+ + +
Sbjct: 73791 GLSKVEQFQLSISTEVKKSIDIPCKISSTRFETDVIHWYRQKPNQALEHLIYIVSTKSAA 73970
Query: 74 QRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW 115
+R +G K+EA K+ ++ TS L I ++KED A YYCA W
Sbjct: 73971 RRSMGKTSNKVEARKNSQTLTSILTIKSVEKEDMAVYYCAAW 74096
Score = 73.9 bits (180), Expect = 2e-11
Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Frame = +2
Query: 6 WFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYL 65
+F+ C V+G G LEQ ++S T+ + ++ C+V S T+++WYR++ + ++L
Sbjct: 56591 FFSPVC--VYGAGHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFL 56764
Query: 66 IYVATNYNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 120
+ ++ + R G K E + ++STSTL I+ ++K+D ATYYCA W SS
Sbjct: 56765 VSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEKQDIATYYCALWEVHSS 56932
Score = 47.8 bits (112), Expect(2) = 2e-10
Identities = 21/36 (58%), Positives = 27/36 (74%)
Frame = +1
Query: 77 LGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYC 112
LG K+KK+EA +F+ STS IN++ KEDEA YYC
Sbjct: 78031 LGEKNKKLEARTNFQMSTSVFTINFIGKEDEAIYYC 78138
Score = 44.7 bits (104), Expect = 0.010
Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Frame = +2
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGG 79
LE SVTR T + +I+C LP S IHWY + + + L+Y Y++ L
Sbjct: 6074 LEGRTKSVTRLTGSSAEITCD--LPGASTLYIHWYLHQEGKAPQCLLYYEPYYSRVVLES 6247
Query: 80 KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW--MSDSSGFH-KVFAEGTK 131
+ S L + L K D YYCA W SDS + V A GT+
Sbjct: 6248 GITPGKYDTGSTRSNWNLRLQNLIKNDSGFYYCATWDRHSDSDTENLPVVASGTQ 6412
Score = 42.4 bits (98), Expect(2) = 2e-10
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 27 VTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFE 63
V R TD++V +SC+V F N IHWY+QK N +E
Sbjct: 77873 VNRATDKSV*VSCVVSTEDFVNIVIHWYQQKLNLNYE 77983
Score = 39.3 bits (90), Expect = 0.42
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGG 79
LE SVTR T + I+C LP + HWY + + + L+Y +YN R +
Sbjct: 43322 LEGRTKSVTRPTGSSAVITCD--LPVENAVYTHWYLHQEGKAPQRLLYY-DSYNSRVVLE 43492
Query: 80 KHKKIEASKDFKSSTSTLE--INYLKKEDEATYYCADW 115
E + S+ +L+ + L + D YYCA W
Sbjct: 43493 SGISREKYHTYASTGKSLKFILENLIERDSGVYYCATW 43606
Score = 37.0 bits (84), Expect = 2.1
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +3
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGG 79
LE SV RQT + +I+C L SN IHWY + + + L Y +YN + +
Sbjct: 10797 LEGRTKSVIRQTGSSAEITCD--LAEGSNGYIHWYLHQEGKAPQRLQYY-DSYNSKVVLE 10967
Query: 80 KHKKIEASKDFKSSTSTLEI--NYLKKEDEATYYCADW 115
+ S+ + L + L + D YYCA W
Sbjct: 10968 SGVSPGKYYTYASTRNNLRLILRNLIENDSGVYYCATW 11081
Score = 36.6 bits (83), Expect = 2.7
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Frame = +3
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGG 79
LE SVTR T + +I+C L + IHWY Q+ + ++L++ + ++ L
Sbjct: 28632 LEGRMKSVTRPTGSSAEITCD--LTVINAVYIHWYLQQEGKTPQHLLHYDVSNSRDVL-- 28799
Query: 80 KHKKIEASKDFKSSTS----TLEINYLKKEDEATYYCADW 115
+ K + + L + L + D YYCA W
Sbjct: 28800 -ESGLSLGKYYTHTPRRWSWNLRLQNLIENDSGVYYCATW 28916
Score = 36.6 bits (83), Expect = 2.7
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +2
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTA-IHWYRQKTNQQFEYLIY--VATNYNQRP 76
LE SVTRQT + +I+C + + +NT IHWY + + + L+Y V+T +
Sbjct: 15149 LEGRTKSVTRQTGSSAEITCDLTV---TNTFYIHWYLHQEGKAPQRLLYYDVSTARDVLE 15319
Query: 77 LGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW 115
G K + S L + L + D YYCA W
Sbjct: 15320 SGLSPGKYYTHTPRRWSW-ILRLQNLIENDSGVYYCATW 15433
>gb|M14996.1|HUMTCGCD1 Human T-cell receptor germline gamma-chain (TCRGC1) gene,
C1-region, exon 1
Length = 410
Score = 187 bits (475), Expect = 9e-46
Identities = 84/117 (71%), Positives = 99/117 (83%)
Frame = +1
Query: 130 TKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGN 189
T + +P DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPDVI+++W+EK N
Sbjct: 16 THISFLPIDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHWQEKKSN 195
Query: 190 TILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIK 246
TIL SQEG+T+KT TYMKFSWLTVPE+++ KEH CIV+HENNK G DQEI FP IK
Sbjct: 196 TILGSQEGNTMKTNDTYMKFSWLTVPEKSLDKEHRCIVRHENNKNGVDQEIIFPPIK 366
>gb|AC006033.2|AC006033 Homo sapiens BAC clone RP11-121A8 from 7p14-p13, complete sequence
Length = 171816
Score = 187 bits (475), Expect = 9e-46
Identities = 84/117 (71%), Positives = 99/117 (83%)
Frame = -3
Query: 130 TKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGN 189
T + +P DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPDVI+++W+EK N
Sbjct: 86602 THISFLPIDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHWQEKKSN 86423
Query: 190 TILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIK 246
TIL SQEG+T+KT TYMKFSWLTVPE+++ KEH CIV+HENNK G DQEI FP IK
Sbjct: 86422 TILGSQEGNTMKTNDTYMKFSWLTVPEKSLDKEHRCIVRHENNKNGVDQEIIFPPIK 86252
Score = 186 bits (471), Expect = 3e-45
Identities = 83/117 (70%), Positives = 98/117 (82%)
Frame = -2
Query: 130 TKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGN 189
T + +P DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I+++W+EK N
Sbjct: 70496 THISFLPIDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKIHWQEKKSN 70317
Query: 190 TILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIK 246
TIL SQEG+T+KT TYMKFSWLTVPE ++ KEH CIV+HENNK G DQEI FP IK
Sbjct: 70316 TILGSQEGNTMKTNDTYMKFSWLTVPEESLDKEHRCIVRHENNKNGIDQEIIFPPIK 70146
Score = 94.7 bits (234), Expect = 8e-18
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
Frame = -2
Query: 17 LGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRP 76
LGQLEQ E+S++R +++ IS + FS+ IHWY QK N+ EYL++V + +
Sbjct: 112823 LGQLEQPEISISRPANKSAHISWKASIQGFSSKIIHWYWQKPNKGLEYLLHVFLTISAQD 112644
Query: 77 L-GGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 120
GGK KK+E SK+ +STSTL+I +L+KEDE Y+CA W+ S
Sbjct: 112643 CSGGKTKKLEVSKNAHTSTSTLKIKFLEKEDEVVYHCACWIRHHS 112509
Score = 86.7 bits (213), Expect = 2e-15
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Frame = -1
Query: 16 GLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYN-- 73
GL ++EQ +LS++ + +++ I C + F IHWYRQK NQ E+LIY+ + +
Sbjct: 121020 GLSKVEQFQLSISTEVKKSIDIPCKISSTRFETDVIHWYRQKPNQALEHLIYIVSTKSAA 120841
Query: 74 QRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW 115
+R +G K+EA K+ ++ TS L I ++KED A YYCA W
Sbjct: 120840 RRSMGKTSNKVEARKNSQTLTSILTIKSVEKEDMAVYYCAAW 120715
Score = 74.7 bits (182), Expect = 9e-12
Identities = 40/118 (33%), Positives = 69/118 (57%), Gaps = 1/118 (0%)
Frame = -2
Query: 4 LRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFE 63
L +F+ C V+G G LEQ ++S T+ + ++ C+V S T+++WYR++ + +
Sbjct: 138254 LPFFSPVC--VYGAGHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQ 138081
Query: 64 YLIYVATNYNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 120
+L+ ++ + R G K E + ++STSTL I+ ++K+D ATYYCA W SS
Sbjct: 138080 FLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEKQDIATYYCALWEVHSS 137907
Score = 47.8 bits (112), Expect(2) = 2e-10
Identities = 21/36 (58%), Positives = 27/36 (74%)
Frame = -3
Query: 77 LGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYC 112
LG K+KK+EA +F+ STS IN++ KEDEA YYC
Sbjct: 116782 LGEKNKKLEARTNFQMSTSVFTINFIGKEDEAIYYC 116675
Score = 42.4 bits (98), Expect(2) = 2e-10
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = -1
Query: 27 VTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFE 63
V R TD++V +SC+V F N IHWY+QK N +E
Sbjct: 116940 VNRATDKSV*VSCVVSTEDFVNIVIHWYQQKLNLNYE 116830
Score = 39.3 bits (90), Expect = 0.42
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = -2
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGG 79
LE SVTR T + I+C LP + HWY + + + L+Y +YN R +
Sbjct: 151532 LEGRTKSVTRPTGSSAVITCD--LPVENAVYTHWYLHQEGKAPQRLLYY-DSYNSRVVLE 151362
Query: 80 KHKKIEASKDFKSSTSTLE--INYLKKEDEATYYCADW 115
E + S+ +L+ + L + D YYCA W
Sbjct: 151361 SGISREKYHTYASTGKSLKFILENLIERDSGVYYCATW 151248
Score = 36.6 bits (83), Expect = 2.7
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Frame = -3
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGG 79
LE SVTR T + +I+C L + IHWY Q+ + ++L++ + ++ L
Sbjct: 166219 LEGRMKSVTRPTGSSAEITCD--LTVINAVYIHWYLQQEGKTPQHLLHYDVSNSRDVL-- 166052
Query: 80 KHKKIEASKDFKSSTS----TLEINYLKKEDEATYYCADW 115
+ K + + L + L + D YYCA W
Sbjct: 166051 -ESGLSLGKYYTHTPRRWSWNLRLQNLIENDSGVYYCATW 165935
>emb|X02766.1|HSTCELG1 Human gene fragment for T-cell receptor gamma 1 chain constant
region (loc. on chromosome 7p15)
Length = 400
Score = 187 bits (475), Expect = 9e-46
Identities = 84/117 (71%), Positives = 99/117 (83%)
Frame = +3
Query: 130 TKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGN 189
T + +P DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPDVI+++W+EK N
Sbjct: 3 THISFLPIDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHWEEKKSN 182
Query: 190 TILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIK 246
TIL SQEG+T+KT TYMKFSWLTVPE+++ KEH CIV+HENNK G DQEI FP IK
Sbjct: 183 TILGSQEGNTMKTNDTYMKFSWLTVPEKSLDKEHRCIVRHENNKNGVDQEIIFPPIK 353
>dbj|D90417.1|BOVBTG32 Bovine mRNA for T-cell receptor gamma chain, a part of V, J, C and
3'UT regions
Length = 1052
Score = 186 bits (471), Expect = 3e-45
Identities = 87/142 (61%), Positives = 106/142 (74%), Gaps = 1/142 (0%)
Frame = +2
Query: 111 YCADWMS-DSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLC 169
YC + DSSG+ K+F EG +IV P ++ L+AD SPKPT+FLPS+AE N GTYLC
Sbjct: 74 YCRSFYHCDSSGWRKIFGEGANIIVTPPERNLEADTSPKPTVFLPSIAEINHDNAGTYLC 253
Query: 170 LLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKH 229
LLEKFFPDVI V W+ KN L SQ+G+T+KTK TYMKFSWLTV E +M K+H C+VKH
Sbjct: 254 LLEKFFPDVITVSWRAKNDKRALPSQQGNTMKTKDTYMKFSWLTVTENSMDKQHVCVVKH 433
Query: 230 ENNKGGADQEIFFPSIKKVATT 251
+ N GG DQEI FPSIK+V T+
Sbjct: 434 KKNIGGIDQEIIFPSIKEVVTS 499
>dbj|D90409.1|BOVBTG2 Bovine mRNA for T-cell receptor gamma chain, a part of V, J, C and
3'UT regions
Length = 1087
Score = 186 bits (471), Expect = 3e-45
Identities = 87/142 (61%), Positives = 106/142 (74%), Gaps = 1/142 (0%)
Frame = +3
Query: 111 YCADWMS-DSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLC 169
YC + DSSG+ K+F EG +IV P ++ L+AD SPKPT+FLPS+AE N GTYLC
Sbjct: 75 YCRSFYHCDSSGWRKIFGEGANIIVTPPERNLEADTSPKPTVFLPSIAEINHDNAGTYLC 254
Query: 170 LLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKH 229
LLEKFFPDVI V W+ KN L SQ+G+T+KTK TYMKFSWLTV E +M K+H C+VKH
Sbjct: 255 LLEKFFPDVITVSWRAKNDKRALPSQQGNTMKTKDTYMKFSWLTVTENSMDKQHVCVVKH 434
Query: 230 ENNKGGADQEIFFPSIKKVATT 251
+ N GG DQEI FPSIK+V T+
Sbjct: 435 KKNIGGIDQEIIFPSIKEVVTS 500
>emb|X63683.1|BTBTGC8 B.taurus BTGC8 mRNA for T cell receptor gamma chain
Length = 826
Score = 184 bits (468), Expect = 6e-45
Identities = 86/142 (60%), Positives = 106/142 (74%), Gaps = 1/142 (0%)
Frame = +2
Query: 111 YCADWMS-DSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLC 169
YC + DSSG+ K+F EG +IV P ++ L+AD SPKPT+FLPS+AE N GTYLC
Sbjct: 74 YCRSFYHCDSSGWRKIFGEGANIIVTPPERNLEADTSPKPTVFLPSIAEINHDNAGTYLC 253
Query: 170 LLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKH 229
LLEKFFPDVI V W+ KN L SQ+G+T+KTK TYMKFSWLT+ E +M K+H C+VKH
Sbjct: 254 LLEKFFPDVITVSWRAKNDKRALPSQQGNTMKTKDTYMKFSWLTMTENSMDKQHVCVVKH 433
Query: 230 ENNKGGADQEIFFPSIKKVATT 251
+ N GG DQEI FPSIK+V T+
Sbjct: 434 KKNIGGIDQEIIFPSIKEVVTS 499
>dbj|D90411.1|BOVBTG15 Bovine mRNA for T-cell receptor gamma chain, a part of V, J, C and
3'UT regions
Length = 1052
Score = 184 bits (466), Expect = 1e-44
Identities = 101/239 (42%), Positives = 126/239 (52%), Gaps = 45/239 (18%)
Frame = +2
Query: 111 YCADWMS-DSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLC 169
YC + DSSG+ K+F EG +IV P ++ L+AD SPKPT+FLPS+AE N GTYLC
Sbjct: 74 YCRSFYHCDSSGWRKIFGEGANIIVTPPERNLEADTSPKPTVFLPSIAEINHDNAGTYLC 253
Query: 170 LLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKH 229
LLEKFFPDVI V W+ KN L SQ+G+T+KTK TYMK SWLTV E +M K+H C+VKH
Sbjct: 254 LLEKFFPDVITVSWRAKNDKRALPSQQGNTMKTKDTYMKLSWLTVTENSMDKQHVCVVKH 433
Query: 230 ENNKGGADQEIFFPSIKKVATT-------------------------------------- 251
+ N GG DQEI FPSIK+V T+
Sbjct: 434 KKNIGGIDQEIIFPSIKEVVTSLVPTTEPPTAEPPNDCLTDESITDTGSKKACLKDGSDT 613
Query: 252 -----CWQDKNDVLQFQ-FXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
C + K+ LQ Q +Y A+I + RRT VC + K S
Sbjct: 614 NSTKACLEGKSSTLQLQLMNTSAAYYTYLLLLLLSTVYFAVIISCVFRRTGVCCDRKIS 790
>emb|Z12966.1|OATCCG3 O.aries rearranged T-cell receptor gamma
Length = 690
Score = 184 bits (466), Expect = 1e-44
Identities = 94/203 (46%), Positives = 117/203 (57%), Gaps = 28/203 (13%)
Frame = +3
Query: 130 TKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGN 189
T+LIV D+ LD D+SPKPT+FLPS+ E +GTYLCLLE FFP VI+VYW+EK GN
Sbjct: 6 TELIVASPDRDLDKDMSPKPTMFLPSITEIKRDNSGTYLCLLEDFFPHVIKVYWREKRGN 185
Query: 190 TILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVA 249
+L SQEG T+KT TYMKFSWLTV +M KEH CIVKHE NK G +QEI FP++ +V
Sbjct: 186 KVLPSQEGKTIKTLDTYMKFSWLTVSGNSMDKEHMCIVKHEKNKRGTNQEILFPAVNEVV 365
Query: 250 TT----------------------------CWQDKNDVLQFQFXXXXXXXXXXXXXXXXV 281
++ C +D+N+ LQ Q
Sbjct: 366 SSVVTTTKPPNDGLKDKSEKQVPVANSTKACLKDENNTLQLQLMSTSAYYTYLLLLIKST 545
Query: 282 IYLAIISFSLLRRTSVCGNEKKS 304
Y AII+ + RRT VCGN+K S
Sbjct: 546 AYFAIITSCVFRRTGVCGNQKSS 614
>emb|Z12965.1|OATCCG2 O.aries rearranged T-cell receptor gamma
Length = 995
Score = 181 bits (460), Expect = 5e-44
Identities = 86/142 (60%), Positives = 104/142 (72%)
Frame = +1
Query: 110 YYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLC 169
Y+C DSSG+ K+F EG +IV P ++ L AD SPKPT+FLPS+AE N GTYLC
Sbjct: 10 YHC-----DSSGWKKIFGEGANIIVTPPERNLAADTSPKPTVFLPSIAEINHDNAGTYLC 174
Query: 170 LLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKH 229
LLEKFFPDVI V W+ KN L SQ+G+T+KTK TYMK SWLTV E +M K+H C+VKH
Sbjct: 175 LLEKFFPDVITVSWRVKNDKRALPSQQGNTMKTKDTYMKLSWLTVTENSMDKQHVCVVKH 354
Query: 230 ENNKGGADQEIFFPSIKKVATT 251
+ N GG DQEI FPSIK+V T+
Sbjct: 355 QKNIGGIDQEIIFPSIKEVVTS 420
>emb|Z49051.1|MMTCPB22B M.musculus mRNA for partial T cell receptor gamma-chain (clone
PB22)
Length = 296
Score = 180 bits (457), Expect = 1e-43
Identities = 86/98 (87%), Positives = 91/98 (92%)
Frame = +1
Query: 19 QLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG 78
QLEQTELSVTR TDE+ QISCIV LPYFSN+ IHWYRQK NQQFEYLIYV TNYNQ+PLG
Sbjct: 1 QLEQTELSVTRATDESAQISCIVSLPYFSNSVIHWYRQKPNQQFEYLIYVETNYNQQPLG 180
Query: 79 GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWM 116
GK+KKIEASKDFKSSTSTL+INYLKKEDEATYYCA WM
Sbjct: 181 GKNKKIEASKDFKSSTSTLKINYLKKEDEATYYCAVWM 294
>gb|M15002.1|HUMTCGCG Human T-cell receptor germline gamma-chain (TCRGC2) gene C2-region
allele gamma-2b, exon 1
Length = 330
Score = 179 bits (455), Expect = 2e-43
Identities = 80/108 (74%), Positives = 93/108 (86%)
Frame = +3
Query: 139 KRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGD 198
K+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I+++W+EK NTIL SQEG+
Sbjct: 3 KQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKIHWQEKKSNTILGSQEGN 182
Query: 199 TLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIK 246
T+KT TYMKFSWLTVPE ++ KEH CIV+HENNK G DQEI FP IK
Sbjct: 183 TMKTNDTYMKFSWLTVPEESLDKEHRCIVRHENNKNGIDQEIIFPPIK 326
>gb|M15001.1|HUMTCGCF Human T-cell receptor germline gamma-chain (TCRGC2) gene C2-region
allele gamma-2a, exon 1
Length = 330
Score = 179 bits (455), Expect = 2e-43
Identities = 80/108 (74%), Positives = 93/108 (86%)
Frame = +3
Query: 139 KRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGD 198
K+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I+++W+EK NTIL SQEG+
Sbjct: 3 KQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKIHWQEKKSNTILGSQEGN 182
Query: 199 TLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIK 246
T+KT TYMKFSWLTVPE ++ KEH CIV+HENNK G DQEI FP IK
Sbjct: 183 TMKTNDTYMKFSWLTVPEESLDKEHRCIVRHENNKNGIDQEIIFPPIK 326
>gb|L21161.1|PIGTCRG10C Pig T-cell receptor gamma10 chain mRNA C-region, 3' end of cds
Length = 1096
Score = 179 bits (454), Expect = 3e-43
Identities = 93/209 (44%), Positives = 118/209 (55%), Gaps = 42/209 (20%)
Frame = +1
Query: 138 DKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEG 197
D L +D+SPKPT+FLPS+AE LH GTYLCLLE FFP+VI+VYWKEKNGN +L+SQ+G
Sbjct: 1 DINLASDLSPKPTVFLPSIAEIKLHNAGTYLCLLENFFPNVIKVYWKEKNGNKVLESQQG 180
Query: 198 DTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATT------ 251
+T++T TYMKFSWLTV + AM KEH C+VKHE N+GG DQEI FPS+ +V T+
Sbjct: 181 NTMRTTNTYMKFSWLTVSKTAMDKEHKCVVKHEKNRGGVDQEIIFPSVNEVVTSVVTTTE 360
Query: 252 ------------------------------------CWQDKNDVLQFQFXXXXXXXXXXX 275
C +D+++ LQ Q
Sbjct: 361 PPNDCLNDGSKATGIDSEKACKKDHSEVTVTDSKKVCQKDESNSLQLQLENTSAYYTYLL 540
Query: 276 XXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
+Y AII+ L RRT VC + K S
Sbjct: 541 LLLKSTLYFAIITCCLFRRT-VCSSGKTS 624
>gb|M77017.1|MUSTCGA M.musculus immunoglobulin rearranged T cell receptor gamma chain
mRNA, partial cds
Length = 291
Score = 176 bits (447), Expect = 2e-42
Identities = 84/98 (85%), Positives = 94/98 (95%)
Frame = +1
Query: 19 QLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG 78
QLEQTELSVTR+TDE+ QISCIVYLPYFSNTAIHWYRQK ++FEYLIYV+TNYNQRPLG
Sbjct: 1 QLEQTELSVTRETDESAQISCIVYLPYFSNTAIHWYRQKA-KKFEYLIYVSTNYNQRPLG 177
Query: 79 GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWM 116
GK+KKIEASKDF++STSTL+INYLKKEDEATYYCA W+
Sbjct: 178 GKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVWI 291
>emb|Z22847.1|MMTCRVJAU M.musculus T cell receptor V gamma 1 mRNA
Length = 291
Score = 174 bits (441), Expect = 8e-42
Identities = 84/98 (85%), Positives = 93/98 (94%)
Frame = +1
Query: 19 QLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG 78
QLEQTELSVTR+TDE+ QISCIV LPYFSNTAIHWYRQK ++FEYLIYV+TNYNQRPLG
Sbjct: 1 QLEQTELSVTRETDESAQISCIVSLPYFSNTAIHWYRQKA-KKFEYLIYVSTNYNQRPLG 177
Query: 79 GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWM 116
GK+KKIEASKDF+SSTSTL+INYLKKEDEATYYCA W+
Sbjct: 178 GKNKKIEASKDFQSSTSTLKINYLKKEDEATYYCAVWI 291
>emb|X63680.1|BTBTGT1 B.taurus BTGT1 mRNA for T cell receptor gamma chain
Length = 1230
Score = 173 bits (439), Expect = 1e-41
Identities = 98/236 (41%), Positives = 124/236 (52%), Gaps = 48/236 (20%)
Frame = +2
Query: 115 WMSDSSGFHKVFAEGTK-----LIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLC 169
W DSS V E L ++ D+ L DISPKPTIFLPS+AE N KTGTYLC
Sbjct: 71 WQPDSSS---VLREALSCFWIFLFLLI*DRNLATDISPKPTIFLPSIAEINHSKTGTYLC 241
Query: 170 LLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKH 229
LLEKFFPD+I+VYWKEK+GN L SQ+G+T+KT TYMK SWLTV E +M KEH C+V+H
Sbjct: 242 LLEKFFPDIIKVYWKEKDGNKALPSQQGNTMKTTDTYMKLSWLTVTENSMDKEHICVVQH 421
Query: 230 ENNKGGADQEIFFPSIKKVATT-------------------------------------- 251
E N GG +QEI FPSI +V ++
Sbjct: 422 ERNIGGINQEILFPSINEVVSSIVPTTESPSDCLNHDSKVTGTGSKKACLKDESEVTADN 601
Query: 252 -----CWQDKNDVLQFQFXXXXXXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEK 302
C +D+++ LQ Q V+Y II+ + RRT +C + K
Sbjct: 602 NSTKVCLKDESNTLQLQLMNTSAYYTYLLLLLKSVVYCIIITSCVFRRTGICCDGK 769
>dbj|D90415.1|BOVBTG25 Bos taurus mRNA for T-cell receptor gamma chain, J and C regions,
clone:BTG25
Length = 1029
Score = 167 bits (424), Expect = 8e-40
Identities = 81/132 (61%), Positives = 99/132 (74%)
Frame = +1
Query: 120 SGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVI 179
+ + K F G KLIV +++ L+AD SPKPT+FLPS+AE N GTYLCLLEKFFPDVI
Sbjct: 85 NSYLKNFNVGAKLIV--TERNLEADTSPKPTVFLPSIAEINHDNAGTYLCLLEKFFPDVI 258
Query: 180 RVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQE 239
V W+ KN L SQ+G+T+KTK TYMKFSWLTV E +M K+H C+VKH+ N GG DQE
Sbjct: 259 TVSWRAKNDKRALPSQQGNTMKTKDTYMKFSWLTVTENSMDKQHVCVVKHKKNIGGIDQE 438
Query: 240 IFFPSIKKVATT 251
I FPSIK+V T+
Sbjct: 439 IIFPSIKEVVTS 474
>dbj|D90410.1|BOVBTG9 Bovine mRNA for T-cell receptor gamma chain, 5'UT, J, C and 3'UT
regions
Length = 1059
Score = 167 bits (424), Expect = 8e-40
Identities = 81/132 (61%), Positives = 99/132 (74%)
Frame = +1
Query: 120 SGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVI 179
+ + K F G KLIV +++ L+AD SPKPT+FLPS+AE N GTYLCLLEKFFPDVI
Sbjct: 85 NNYIKNFNVGAKLIV--TERNLEADTSPKPTVFLPSIAEINHDNAGTYLCLLEKFFPDVI 258
Query: 180 RVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQE 239
V W+ KN L SQ+G+T+KTK TYMKFSWLTV E +M K+H C+VKH+ N GG DQE
Sbjct: 259 TVSWRAKNDKRALPSQQGNTMKTKDTYMKFSWLTVTENSMDKQHVCVVKHKKNIGGIDQE 438
Query: 240 IFFPSIKKVATT 251
I FPSIK+V T+
Sbjct: 439 IIFPSIKEVVTS 474
>dbj|D90413.1|BOVBTG20 Bovine mRNA for T-cell receptor gamma chain, 5'UT, J, C and 3'UT
regions
Length = 1064
Score = 166 bits (421), Expect = 2e-39
Identities = 80/132 (60%), Positives = 99/132 (74%)
Frame = +1
Query: 120 SGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVI 179
+ + K F G KLIV +++ L+AD SPKPT+FLPS+AE N GTYLCLLEKFFPDVI
Sbjct: 85 NNYIKNFNVGAKLIV--TERNLEADTSPKPTVFLPSIAEINHDNAGTYLCLLEKFFPDVI 258
Query: 180 RVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQE 239
V W+ KN L SQ+G+T+KTK TYMKFSWLT+ E +M K+H C+VKH+ N GG DQE
Sbjct: 259 TVSWRAKNDKRALPSQQGNTMKTKDTYMKFSWLTMTENSMDKQHVCVVKHKKNIGGIDQE 438
Query: 240 IFFPSIKKVATT 251
I FPSIK+V T+
Sbjct: 439 IIFPSIKEVVTS 474
>dbj|D90416.1|BOVBTG27 Bos taurus mRNA for T-cell receptor gamma chain, J and C regions,
clone:BTG27
Length = 1037
Score = 166 bits (421), Expect = 2e-39
Identities = 81/132 (61%), Positives = 98/132 (73%)
Frame = +3
Query: 120 SGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVI 179
+ + K F G KLIV +++ L+AD SPKPT+FLPS AE N GTYLCLLEKFFPDVI
Sbjct: 93 NSYLKNFNVGAKLIV--TERNLEADTSPKPTVFLPSTAEINHDNAGTYLCLLEKFFPDVI 266
Query: 180 RVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQE 239
V W+ KN L SQ+G+T+KTK TYMKFSWLTV E +M K+H C+VKH+ N GG DQE
Sbjct: 267 TVSWRAKNDKRALPSQQGNTMKTKDTYMKFSWLTVTENSMDKQHVCVVKHKKNIGGIDQE 446
Query: 240 IFFPSIKKVATT 251
I FPSIK+V T+
Sbjct: 447 IIFPSIKEVVTS 482
>emb|X63682.1|BTBTGT4 B.taurus BTGT4 mRNA for T cell receptor gamma chain
Length = 865
Score = 166 bits (421), Expect = 2e-39
Identities = 80/132 (60%), Positives = 99/132 (74%)
Frame = +2
Query: 120 SGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVI 179
+ + K F G KLIV +++ L+AD SPKPT+FLPS+AE N GTYLCLLEKFFPDVI
Sbjct: 149 NNYIKNFNVGAKLIV--TERNLEADTSPKPTVFLPSIAEINHDNAGTYLCLLEKFFPDVI 322
Query: 180 RVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQE 239
V W+ KN L SQ+G+T+KTK TYMKFSWLT+ E +M K+H C+VKH+ N GG DQE
Sbjct: 323 TVSWRAKNDKRALPSQQGNTMKTKDTYMKFSWLTMTENSMDKQHVCVVKHKKNIGGIDQE 502
Query: 240 IFFPSIKKVATT 251
I FPSIK+V T+
Sbjct: 503 IIFPSIKEVVTS 538
>emb|Z12967.1|OATCCG4 O.aries rearranged T-cell receptor gamma
Length = 767
Score = 166 bits (420), Expect = 2e-39
Identities = 94/216 (43%), Positives = 114/216 (52%), Gaps = 40/216 (18%)
Frame = +1
Query: 129 GTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNG 188
GTK+ V DK L DI PKPTIFLPS+ E N +T TYLCLLE FFPDVI+V WKEKNG
Sbjct: 7 GTKVFV--QDKNLPTDIIPKPTIFLPSINEVNHQQTATYLCLLENFFPDVIKVSWKEKNG 180
Query: 189 NTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK- 247
+L SQ+G+T+KT TYMKFSWLTV E +M KEH CIV+ E N GG DQEI FP++ +
Sbjct: 181 KRVLPSQQGNTMKTNNTYMKFSWLTVTEDSMKKEHMCIVRLEKNAGGKDQEILFPAVNEV 360
Query: 248 ----VATT-----------------------------------CWQDKNDVLQFQFXXXX 268
VATT C +D+N+ ++ Q
Sbjct: 361 FSPVVATTEPPDDCLQDESEVTDTDFTKVCSRGESEVTDSTKACLKDENNTVELQLAYNS 540
Query: 269 XXXXXXXXXXXXVIYLAIISFSLLRRTSVCGNEKKS 304
IY S + RRT VC + K S
Sbjct: 541 AYYTYLLLLLKSAIYFVTSSCCVFRRTGVCHDGKSS 648
>gb|M14999.1|HUMTCGCE Human T-cell receptor germline gamma-chain (TCRGC1) gene C1-region
allele gamma-1a, exon 1
Length = 300
Score = 166 bits (420), Expect = 2e-39
Identities = 73/99 (73%), Positives = 86/99 (86%)
Frame = +3
Query: 139 KRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGD 198
K+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I+++W+EK NTIL SQEG+
Sbjct: 3 KQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKIHWQEKKSNTILGSQEGN 182
Query: 199 TLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGAD 237
T+KT TYMKFSWLTVPE ++ KEH CIV+HENNK G D
Sbjct: 183 TMKTNDTYMKFSWLTVPEESLDKEHRCIVRHENNKNGID 299
>emb|Z48588.1|MMTCRGBV1 M.musculus mRNA for T-cell receptor gammaB-V1 segment
Length = 290
Score = 164 bits (416), Expect = 7e-39
Identities = 79/97 (81%), Positives = 87/97 (89%)
Frame = +1
Query: 19 QLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG 78
QL+QTE+SVTR+TDE+ QISCI LP F NT IHWYRQK +QFEYLIYV TNYNQRPLG
Sbjct: 1 QLKQTEVSVTRETDESAQISCIASLPDFGNTEIHWYRQKA-KQFEYLIYVQTNYNQRPLG 177
Query: 79 GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW 115
GKHKKIEASKDF++STSTL+INYLKKEDEATYYCA W
Sbjct: 178 GKHKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVW 288
>emb|Z12964.1|OATCCG1 O.aries rearranged T-cell receptor gamma
Length = 896
Score = 163 bits (412), Expect = 2e-38
Identities = 86/208 (41%), Positives = 112/208 (53%), Gaps = 43/208 (20%)
Frame = +2
Query: 138 DKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEG 197
++ L D+SPKP IFLPS+AE N KTGTYLCLLEKFFPD+I+VYWKEK+GN L SQ+G
Sbjct: 89 NRNLATDLSPKPIIFLPSIAEINHSKTGTYLCLLEKFFPDIIKVYWKEKDGNRALPSQQG 268
Query: 198 DTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATT------ 251
+T+ T TYMK SWLTV E +M KEH C+V+HE N G +QEI FPSI +V ++
Sbjct: 269 NTMNTTDTYMKLSWLTVTENSMDKEHICVVQHERNIRGINQEILFPSINEVVSSIVPTTE 448
Query: 252 -------------------------------------CWQDKNDVLQFQFXXXXXXXXXX 274
C +D+++ LQ Q
Sbjct: 449 SPSDCLNQESKVTGTGSKKACLKDESEVTADNNSTKVCLEDESNTLQLQLMNTSAYYTYL 628
Query: 275 XXXXXXVIYLAIISFSLLRRTSVCGNEK 302
V+Y II+ + RRT +C + K
Sbjct: 629 LLLLKSVVYFIIITSCVFRRTGMCCDGK 712
>emb|Z13004.1|OATCVG4 O.aries rearranged T-cell receptor gamma
Length = 504
Score = 160 bits (406), Expect = 1e-37
Identities = 83/175 (47%), Positives = 109/175 (61%)
Frame = +1
Query: 28 TRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIEAS 87
TR+ D V ISC + N +HWY++K + + ++Y + N + L + ++E
Sbjct: 4 TRRPDRTVHISCKLSGVPLENAVVHWYQEKEGEPLKRILYGSANSYK--LDKPNSRLEMD 177
Query: 88 KDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISP 147
K+ L IN + K DEATYYCA W KVF EGTKL+VIP D+RLD D+ P
Sbjct: 178 NK-KNGIFYLIINNVVKSDEATYYCACWGI------KVFGEGTKLVVIPPDRRLDGDLFP 336
Query: 148 KPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKT 202
KPTIF PSV E H GT+LCLL+ FFPD I+V WKEKNGNTIL+S +G+ +KT
Sbjct: 337 KPTIFFPSVEEVKRHSAGTHLCLLQNFFPDAIKVQWKEKNGNTILESHQGNIIKT 501
>gb|L14603.1|PIGTCRGDCB Pig T-cell receptor gamma and delta constant region mRNA, partial
cds
Length = 295
Score = 159 bits (403), Expect = 2e-37
Identities = 69/98 (70%), Positives = 82/98 (83%)
Frame = +2
Query: 146 SPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKTKGT 205
SPKPT+FLPS+AE LH GTYLCLLE FFP+VI+VYWKEKNGN +L+SQ+G+T++T T
Sbjct: 2 SPKPTVFLPSIAEIKLHNAGTYLCLLENFFPNVIKVYWKEKNGNKVLESQQGNTMRTTNT 181
Query: 206 YMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFP 243
YMKFSWLTV + AM KEH C+VKHE N+G DQEI FP
Sbjct: 182 YMKFSWLTVSKTAMDKEHKCVVKHEKNRGRVDQEIIFP 295
>dbj|D89023.1|D89023 Felis catus mRNA for TCR gamma constant chain, partial cds
Length = 508
Score = 159 bits (401), Expect = 4e-37
Identities = 69/94 (73%), Positives = 81/94 (85%)
Frame = +1
Query: 154 PSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLT 213
PS+AE NLHK GTYLCLLE FFP VI +YWKEKNG TIL+SQ+G+T+KTK TYMK++WLT
Sbjct: 1 PSIAEVNLHKAGTYLCLLEDFFPGVIEIYWKEKNGKTILESQQGNTMKTKDTYMKYTWLT 180
Query: 214 VPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK 247
V E +MGKEH C+VKH++NKGG DQEI FPSI K
Sbjct: 181 VSEESMGKEHKCVVKHDSNKGGVDQEILFPSIDK 282
>gb|AF047015.1|AF047015 Ovis aries T cell receptor gamma1 constant region gene, partial cds
Length = 3101
Score = 158 bits (400), Expect = 5e-37
Identities = 72/112 (64%), Positives = 87/112 (77%)
Frame = +1
Query: 136 PSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQ 195
P ++ L D+SPKP IFLPS+AE N KTGTYLCLLEKFFPD+I+VYWKEK+GN L SQ
Sbjct: 1213 PQNRNLATDLSPKPIIFLPSIAEINHSKTGTYLCLLEKFFPDIIKVYWKEKDGNRALPSQ 1392
Query: 196 EGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK 247
+G+T+ T TYMK SWLTV E +M KEH C+V+HE N G +QEI FPSI +
Sbjct: 1393 QGNTMNTTDTYMKLSWLTVTENSMDKEHICVVQHERNIRGINQEILFPSINE 1548
>dbj|D90412.1|BOVBTG17 Bovine mRNA for T-cell receptor gamma chain, a part of V, J, C and
3'UT regions
Length = 1042
Score = 158 bits (399), Expect = 6e-37
Identities = 76/140 (54%), Positives = 97/140 (69%), Gaps = 1/140 (0%)
Frame = +2
Query: 111 YCADWMS-DSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLC 169
YC + DSSG+ K+F EG +IV P ++ L+AD SPKPT+FLPS+AE N GTYLC
Sbjct: 74 YCRSFYHCDSSGWRKIFGEGANIIVTPPERNLEADTSPKPTVFLPSIAEINHDNAGTYLC 253
Query: 170 LLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKH 229
LLEKFFPDVI V W+ KN L SQ+G+T+KTK TYMK SWLTV E +M K+H C+VKH
Sbjct: 254 LLEKFFPDVITVSWRAKNDKRALPSQQGNTMKTKDTYMKLSWLTVTENSMDKQHVCVVKH 433
Query: 230 ENNKGGADQEIFFPSIKKVA 249
+ + +FF KK++
Sbjct: 434 KKI*EELIKRLFFLQ*KKLS 493
>gb|AF234763.1|AF234763S1 Ovis aries T-cell receptor constant region Cgamma3 gene, partial
sequence
Length = 397
Score = 157 bits (398), Expect = 8e-37
Identities = 71/112 (63%), Positives = 86/112 (76%)
Frame = +2
Query: 136 PSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQ 195
P+D+ LD D+SPKPT+FLPS+ E +GTYLCLLE FFP VI+VYW+EK GN +L SQ
Sbjct: 44 PTDRDLDIDMSPKPTMFLPSITEIKRDNSGTYLCLLEDFFPHVIKVYWREKRGNKVLPSQ 223
Query: 196 EGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK 247
EG T+KT TYMKFSWLTV +M KEH CIVKHE NK G +QEI FP++ +
Sbjct: 224 EGKTIKTLDTYMKFSWLTVSGNSMDKEHMCIVKHEKNKRGTNQEILFPAVNE 379
>gb|AF312559.1|AF312559S1 Ovis aries T-cell receptor constant region Cgamma2b gene, exon
sequence
Length = 770
Score = 157 bits (396), Expect = 1e-36
Identities = 72/112 (64%), Positives = 86/112 (76%)
Frame = +1
Query: 136 PSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQ 195
P+++ L AD SPKPT+FLPS+AE N GTYLCLLEKFFPDVI V W+ KN L SQ
Sbjct: 403 PTERNLAADTSPKPTVFLPSIAEINHDNAGTYLCLLEKFFPDVITVSWRVKNDKRALPSQ 582
Query: 196 EGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK 247
+G+T+KTK TYMK SWLTV E +M K+H C+VKH+ N GG DQEI FPSIK+
Sbjct: 583 QGNTMKTKDTYMKLSWLTVTENSMDKQHVCVVKHQKNIGGIDQEIIFPSIKE 738
>gb|AF312555.1|AF312555S1 Ovis aries T-cell receptor constant region Cgamma2a gene, partial
sequence
Length = 366
Score = 157 bits (396), Expect = 1e-36
Identities = 72/112 (64%), Positives = 86/112 (76%)
Frame = +2
Query: 136 PSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQ 195
P+++ L AD SPKPT+FLPS+AE N GTYLCLLEKFFPDVI V W+ KN L SQ
Sbjct: 23 PTERNLAADTSPKPTVFLPSIAEINHDNAGTYLCLLEKFFPDVITVSWRVKNDKRALPSQ 202
Query: 196 EGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK 247
+G+T+KTK TYMK SWLTV E +M K+H C+VKH+ N GG DQEI FPSIK+
Sbjct: 203 QGNTMKTKDTYMKLSWLTVTENSMDKQHVCVVKHQKNIGGIDQEIIFPSIKE 358
>gb|AF241307.1|AF241307S1 Ovis aries T cell receptor constant region Cgamma4, exon
Length = 449
Score = 155 bits (393), Expect = 3e-36
Identities = 72/110 (65%), Positives = 84/110 (75%)
Frame = +1
Query: 138 DKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEG 197
DK L DI PKPTIFLPS+ E N +T TYLCLLE FFPDVI+V WKEKNG +L SQ+G
Sbjct: 79 DKNLPTDIIPKPTIFLPSINEVNHQQTATYLCLLENFFPDVIKVSWKEKNGKRVLPSQQG 258
Query: 198 DTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK 247
+T+KT TYMKFSWLTV E +M KEH CIV+ E N GG DQEI FP++ +
Sbjct: 259 NTMKTNNTYMKFSWLTVTEDSMKKEHMCIVRLEKNAGGKDQEILFPAVNE 408
>dbj|D23724.1|RABTCRGC1 Rabbit mRNA for T cell receptor gamma constant
Length = 486
Score = 155 bits (392), Expect = 4e-36
Identities = 71/97 (73%), Positives = 84/97 (86%)
Frame = +1
Query: 151 IFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKTKGTYMKFS 210
IFLPS+AET LHK GTYLCLLEKFFPDVI+VYWKEKNG+TIL+SQEG+T+K GTYMKFS
Sbjct: 1 IFLPSIAETKLHKAGTYLCLLEKFFPDVIKVYWKEKNGDTILESQEGNTMKINGTYMKFS 180
Query: 211 WLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKK 247
WLTVP+++ KEH CIV+HEN + + QEI FP+I K
Sbjct: 181 WLTVPQKSFDKEHRCIVEHENTR-ESKQEILFPAINK 288
>gb|S60780.1|S60780 TCR- gamma V-IV=T-cell receptor gamma chain variable region
[human, mononuclear cells, mRNA, 606 nt]
Length = 606
Score = 154 bits (388), Expect = 1e-35
Identities = 79/150 (52%), Positives = 107/150 (70%), Gaps = 3/150 (2%)
Frame = +2
Query: 17 LGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRP 76
LGQLEQ E+S++R +++ IS + FS+ IHWY QK N+ EYL++V + +
Sbjct: 155 LGQLEQPEISISRPANKSAHISWKASIQGFSSKIIHWYWQKPNKGLEYLLHVFLTISAQD 334
Query: 77 L-GGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSD--SSGFHKVFAEGTKLI 133
GGK KK+E SK+ +STSTL+I +L+KEDE Y+CA W+ ++G+ K+FAEGTKLI
Sbjct: 335 CSGGKTKKLEVSKNAHTSTSTLKIKFLEKEDEVVYHCACWIRHVGATGWFKIFAEGTKLI 514
Query: 134 VIPSDKRLDADISPKPTIFLPSVAETNLHK 163
V DK+LDAD+SPKPTIFLPS+AET L K
Sbjct: 515 VTSPDKQLDADVSPKPTIFLPSIAETKLQK 604
>gb|S60779.1|S60779 Homo sapiens nonfunctional T-cell receptor gamma chain variable
region mRNA, partial sequence
Length = 620
Score = 145 bits (366), Expect = 4e-33
Identities = 73/153 (47%), Positives = 102/153 (65%), Gaps = 5/153 (3%)
Frame = +1
Query: 16 GLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYN-- 73
GL ++EQ +LS++ + +++ I C + F IHWYRQK NQ E+LIY+ + +
Sbjct: 160 GLSKVEQFQLSISTEVKKSIDIPCKISSTRFETDVIHWYRQKPNQALEHLIYIVSTKSAA 339
Query: 74 QRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW---MSDSSGFHKVFAEGT 130
+R +G K+EA K+ ++ TS L I ++KED A YYCA W D++G+ K+FAEGT
Sbjct: 340 RRSMGKTSNKVEARKNSQTLTSILTIKSVEKEDMAVYYCAAWDYITGDTTGWFKIFAEGT 519
Query: 131 KLIVIPSDKRLDADISPKPTIFLPSVAETNLHK 163
KLIV DK+LDAD+SPK TIFLPS+AET L K
Sbjct: 520 KLIVTSPDKQLDADVSPKATIFLPSIAETKLQK 618
>gb|L38392.1|HRSTCRG Equus caballus (clone Gorig) T cell receptor gamma (TCRG) mRNA, VDJ
region
Length = 972
Score = 143 bits (361), Expect = 2e-32
Identities = 66/105 (62%), Positives = 79/105 (74%)
Frame = +1
Query: 151 IFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKTKGTYMKFS 210
IFLPS+AE LHK GTYLCLLEKFFP+VI++YWKEK+GNTI SQ+ KT TYMKFS
Sbjct: 1 IFLPSIAEIKLHKAGTYLCLLEKFFPEVIKIYWKEKDGNTIPQSQQEIPWKTDNTYMKFS 180
Query: 211 WLTVPERAMGKEHSCIVKHENNKGGADQEIFFPSIKKVATTCWQD 255
WLTV ++M KEH C+V+HE K G DQEI FPS+ +V + D
Sbjct: 181 WLTVTGKSMDKEHKCVVQHEKIKTGVDQEILFPSVNEVLNSSLPD 315
>emb|Z12999.1|OATCVG21 O.aries rearranged T-cell receptor gamma
Length = 653
Score = 143 bits (360), Expect = 2e-32
Identities = 77/188 (40%), Positives = 111/188 (58%), Gaps = 5/188 (2%)
Frame = +3
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG- 78
+E+ ++S+T+ + I L + IHWY+ + L+Y +Y++ L
Sbjct: 108 MEREKMSITKAAVPGAFVEIICDLITQTVKYIHWYKHQEGTAPRRLLYYDISYSKIVLES 287
Query: 79 ----GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIV 134
GK+K +K + T I+ L++ D YYCA W +SSG+ K+F + T+LIV
Sbjct: 288 GISEGKYKV------YKEKSYTFAISNLQESDSGMYYCAVW-ENSSGWKKIFGKATELIV 446
Query: 135 IPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDS 194
D+ LD D+SPKPT+FLPS+ E +GTYLCLLE FFP VI+VYW+EK GN +L S
Sbjct: 447 ASPDRDLDKDMSPKPTMFLPSITEIKRDNSGTYLCLLEDFFPHVIKVYWREKRGNKVLPS 626
Query: 195 QEGDTLKT 202
QEG T+KT
Sbjct: 627 QEGKTIKT 650
>gb|U07555.1|MMU07555 Mus musculus AKR T-cell receptor gamma chain V gamma 2 region
mRNA, partial cds
Length = 220
Score = 140 bits (352), Expect = 2e-31
Identities = 66/73 (90%), Positives = 72/73 (98%)
Frame = +2
Query: 26 SVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIE 85
SVTR+TDE+VQISCIV+LPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPL GK+KKIE
Sbjct: 2 SVTRETDESVQISCIVFLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLEGKNKKIE 181
Query: 86 ASKDFKSSTSTLE 98
ASKDFK+STSTL+
Sbjct: 182ASKDFKTSTSTLK 220
>emb|Z13000.1|OATCVG22 O.aries rearranged T-cell receptor gamma
Length = 672
Score = 137 bits (345), Expect = 1e-30
Identities = 75/185 (40%), Positives = 107/185 (57%), Gaps = 2/185 (1%)
Frame = +1
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPL-- 77
+E ++S+T+ + I L + IHWY+ + L+Y +Y++ L
Sbjct: 127 MEGEKMSITKAAVPGAFVEIICDLITQTAKYIHWYKYQEGTAPRRLLYYDISYSKVVLES 306
Query: 78 GGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPS 137
G K + +K + T I+ L++ D YYCA W SSG+ K+F + T+LIV
Sbjct: 307 GISEGKYQV---YKEKSYTFAISNLQESDSGMYYCAVW-EYSSGWKKIFGKATELIVASP 474
Query: 138 DKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEG 197
D+ LD D+SPKPT+FLPS+ E +G YLCLLE FFP VI+VYW+EK GN +L SQEG
Sbjct: 475 DRDLDKDMSPKPTMFLPSITEIKRDNSGRYLCLLEDFFPHVIKVYWREKRGNKVLPSQEG 654
Query: 198 DTLKT 202
T+KT
Sbjct: 655 KTIKT 669
>emb|Z13007.1|OATCVG6 O.aries rearranged T-cell receptor gamma
Length = 708
Score = 133 bits (335), Expect = 2e-29
Identities = 73/156 (46%), Positives = 94/156 (59%), Gaps = 4/156 (2%)
Frame = +1
Query: 51 IHWYRQKTNQQFEYLIYVATNYNQ----RPLGGKHKKIEASKDFKSSTSTLEINYLKKED 106
+HW+RQ Q E L+ +A + LGG K+ A++ + T+ + L K D
Sbjct: 256 VHWFRQLEGQAPERLLNLALSKRDVQWDSVLGGD--KVSAARGGDGKSCTMSLRKLAKSD 429
Query: 107 EATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGT 166
E YYCA W D + + +F GTK+ V DK L DI PKPTIFLPS+ E N +T T
Sbjct: 430 EGLYYCAAW--DYNLNYMIFGGGTKVFV--QDKNLPTDIIPKPTIFLPSINEVNHQQTAT 597
Query: 167 YLCLLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKT 202
YLCLLE FFPDVI+V WKEKNG +L SQ G+T+KT
Sbjct: 598 YLCLLENFFPDVIKVSWKEKNGKRVLPSQHGNTMKT 705
>gb|AF134235.1|AF134235 Equus caballus T-cell receptor gamma subunit (TCRG) gene, partial
cds
Length = 252
Score = 133 bits (334), Expect = 2e-29
Identities = 62/84 (73%), Positives = 69/84 (81%)
Frame = +1
Query: 145 ISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKTKG 204
ISPKPT FLPS+AE LHK GTYLCLLEKFFP+VI+VYWKEK+GNTIL SQ+ KT
Sbjct: 1 ISPKPTSFLPSIAEIKLHKAGTYLCLLEKFFPEVIKVYWKEKDGNTILQSQQEIPWKTDN 180
Query: 205 TYMKFSWLTVPERAMGKEHSCIVK 228
TYMKFSWLTV ++M KEH CIVK
Sbjct: 181 TYMKFSWLTVTGKSMDKEHKCIVK 252
>gb|U07556.1|MMU07556 Mus musculus AKR T-cell receptor gamma chain V gamma 3 region
mRNA, partial cds
Length = 220
Score = 130 bits (328), Expect = 1e-28
Identities = 62/73 (84%), Positives = 67/73 (90%)
Frame = +2
Query: 26 SVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIE 85
SVTR TDE+ QISCIV LPYFSN+ IHWYRQK NQQFEYLIYV TNYNQ+PLGGK+KKIE
Sbjct: 2 SVTRATDESAQISCIVSLPYFSNSVIHWYRQKPNQQFEYLIYVETNYNQQPLGGKNKKIE 181
Query: 86 ASKDFKSSTSTLE 98
ASKDFKSSTSTL+
Sbjct: 182ASKDFKSSTSTLK 220
>dbj|D38142.1|RABTCRG8 Rabbit mRNA for T-cell receptor gamma chain V2-P2-C precursor
Length = 442
Score = 128 bits (321), Expect = 7e-28
Identities = 70/145 (48%), Positives = 93/145 (63%), Gaps = 4/145 (2%)
Frame = +2
Query: 13 WVFGLG--QLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVAT 70
W GLG ++EQ+++SV+ + ++V I C V F + IHWYRQK NQ E+LI V++
Sbjct: 20 WAAGLGLSKVEQSQISVSAEVQKSVAIFCEVSSSTFESEVIHWYRQKPNQALEHLIQVSS 199
Query: 71 NYN--QRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAE 128
LGGK K+EA K ++STS L +N+++K D ATYYCA W + KVF
Sbjct: 200 TKTPAHANLGGKRNKVEAEKAPQNSTSILTVNFIEKGDVATYYCAGW--GDRYYEKVFGA 373
Query: 129 GTKLIVIPSDKRLDADISPKPTIFL 153
GTKL+VI DK+LD D SPKPTIFL
Sbjct: 374 GTKLVVI--DKKLDGDFSPKPTIFL 442
>gb|U07558.1|MMU07558 Mus musculus BALB/c T-cell receptor gamma chain V gamma 3 region
mRNA, partial cds
Length = 220
Score = 127 bits (320), Expect = 9e-28
Identities = 61/73 (83%), Positives = 67/73 (91%)
Frame = +2
Query: 26 SVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIE 85
SVTR TDE+ QISCIV LP FSNTAIHWYRQK NQQFEYLIYV TNYNQ+PLGGK+KKIE
Sbjct: 2 SVTRATDESAQISCIVSLPCFSNTAIHWYRQKPNQQFEYLIYVETNYNQQPLGGKNKKIE 181
Query: 86 ASKDFKSSTSTLE 98
ASKDF++STSTL+
Sbjct: 182ASKDFQTSTSTLK 220
>gb|S73842.1|S73842 TCR V gamma 3J gamma 2C gamma 2=T cell receptor gamma chain {V-J-C
region, clone i37-4} [human, i cell line, T cells, mRNA
Partial, 411 nt]
Length = 411
Score = 120 bits (302), Expect = 1e-25
Identities = 59/99 (59%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Frame = +1
Query: 97 LEINYLKKEDEATYYCADWMSDSSG-FHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPS 155
L + L + D YYCA W D G + K+F GT L+V +DK+LDAD+SPKPTIFLPS
Sbjct: 127 LRLQNLIENDSGVYYCATW--DRLGNYKKLFGSGTTLVV--TDKQLDADVSPKPTIFLPS 294
Query: 156 VAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDS 194
+AET L K GTYLCLLEKFFPD+I+++W+EK NTIL S
Sbjct: 295 IAETKLQKAGTYLCLLEKFFPDIIKIHWQEKKSNTILGS 411
>emb|Z12998.1|OATCVG1 O.aries rearranged T-cell receptor gamma
Length = 604
Score = 117 bits (293), Expect = 1e-24
Identities = 71/170 (41%), Positives = 93/170 (53%), Gaps = 4/170 (2%)
Frame = +1
Query: 24 ELSVTRQTDENVQISCIVYLPYFSNTA--IHWYRQKTNQQFEYLIYVATNYNQRPL--GG 79
++SVT +T + +C F+ IH Y+Q+ L Y Y++ G
Sbjct: 124 QMSVTAKTWDTTSFTCD-----FTQDVKYIHLYKQQEGMAPRRLFYYDVYYSKIEFESGI 288
Query: 80 KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDK 139
K K + I L+ D TYYCA W + + K F GTKL+V +D+
Sbjct: 289 DKAKYSVYKGAAGRSYRFAILNLEHSDSGTYYCAVW---AGSYIKNFNVGTKLVV--TDR 453
Query: 140 RLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGN 189
L D+SPKP IFLPS+AE N KTGTYLCLLEKFFPD+I+VYWKEK+GN
Sbjct: 454 NLATDLSPKPIIFLPSIAEINHSKTGTYLCLLEKFFPDIIKVYWKEKDGN 603
>gb|M30171.1|MUSTCGXI Mouse T-cell receptor gamma-chain mRNA V4-J1 region, 3' end
Length = 354
Score = 95.5 bits (236), Expect(2) = 4e-24
Identities = 47/95 (49%), Positives = 64/95 (66%)
Frame = +1
Query: 19 QLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG 78
+LEQ E+S++R DE QISC V++ F + IHWYRQK NQ E+L+YV L
Sbjct: 1 KLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHVFLD 180
Query: 79 GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA 113
++KK+EASK+ +STS L I L++EDEA YYC+
Sbjct: 181 KEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCS 285
Score = 41.2 bits (95), Expect(2) = 4e-24
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 119 SSGFHKVFAEGTKLIVIPS 137
SSGFHKVFAEGTKLIVIPS
Sbjct: 297 SSGFHKVFAEGTKLIVIPS 353
>gb|U22666.1|GGU22666 Gallus gallus clone CK186 T cell receptor gamma mRNA, complete cds
Length = 1906
Score = 115 bits (287), Expect = 6e-24
Identities = 78/228 (34%), Positives = 109/228 (47%), Gaps = 4/228 (1%)
Frame = +1
Query: 20 LEQTELSVTRQTDENVQISCIVY-LPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG 78
L+Q + S TR+ + V I C V + F N IHWYRQ E L+YV
Sbjct: 166 LQQRQPSATRERSKTVTIQCHVEGIADFHNAYIHWYRQMPAGAPERLLYVTAVAQVSYDS 345
Query: 79 GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSD 138
+K S + TL + + +D+ TYYCA W S S ++KVF GTKLIV SD
Sbjct: 346 DSYKNKYTSSKMGNKICTLSVQDIGDDDKGTYYCAYWESRSGYYYKVFGSGTKLIV--SD 519
Query: 139 KRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYW-KEKNGNTILDSQEG 197
K S P + + + K Y+CL+EK +P+VIRV W E N + +G
Sbjct: 520 KG-----SSAPENY--EIMQEEHEKQVVYVCLIEKSYPEVIRVKWTDEANKEVTQNVVKG 678
Query: 198 DTLKTKG--TYMKFSWLTVPERAMGKEHSCIVKHENNKGGADQEIFFP 243
D K+ G Y +WL+VP + K +SC +HE+ + FP
Sbjct: 679 DVWKSPGEDKYSVSTWLSVPLESKNKIYSCTYEHESGGNSLSTQDLFP 822
>dbj|D38143.1|RABTCRG9 Rabbit mRNA for T-cell receptor gamma chain V2-J2-C
Length = 351
Score = 114 bits (286), Expect = 8e-24
Identities = 63/122 (51%), Positives = 78/122 (63%), Gaps = 2/122 (1%)
Frame = +1
Query: 34 NVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYN--QRPLGGKHKKIEASKDFK 91
+V I C V F + IHWYRQK NQ E+LI V++ LGGK K+EA K +
Sbjct: 1 SVAIFCEVSSSTFESEVIHWYRQKPNQALEHLIQVSSTKTPAHANLGGKRNKVEAEKAPQ 180
Query: 92 SSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTI 151
+STS L +N+++K D ATYYCA W S + KVF GTKL+VI DK+LD D SPKPTI
Sbjct: 181 NSTSILTVNFIEKGDVATYYCAGW---GSYYEKVFGAGTKLVVI--DKKLDGDFSPKPTI 345
Query: 152 FL 153
FL
Sbjct: 346 FL 351
>gb|U73188.1|BTU73188 Bos taurus T cell receptor gamma chain variable region BVG7 mRNA,
partial cds
Length = 354
Score = 113 bits (282), Expect = 2e-23
Identities = 58/107 (54%), Positives = 74/107 (68%), Gaps = 2/107 (1%)
Frame = +1
Query: 12 LWVFGLGQLE--QTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVA 69
LW FGLGQL QTE+SVT ++++ +SC V+ FS IHWYRQK +Q E L++V
Sbjct: 34 LWSFGLGQLTLVQTEVSVTGTREKSIIMSCKVFSKDFSKDYIHWYRQKPDQGLEQLLFVL 213
Query: 70 TNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWM 116
LGGK K+EA KD SSTSTL+I++L+KEDEATYYCA W+
Sbjct: 214 DAPALNDLGGKKNKLEARKDKPSSTSTLKISFLEKEDEATYYCAGWL 354
>emb|Z13005.1|OATCVG51 O.aries rearranged T-cell receptor gamma
Length = 550
Score = 112 bits (281), Expect = 3e-23
Identities = 65/169 (38%), Positives = 89/169 (52%), Gaps = 3/169 (1%)
Frame = +1
Query: 19 QLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPL- 77
Q+ + +TR+T E C + IH Y+ + +Y +YN +P+
Sbjct: 58 QVSSNLMLITRKTGETASFPCDLT---HGAIYIHLYKHEEGMAPRRPLYY-DSYNSKPVF 225
Query: 78 --GGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVI 135
G K K SS + +N L+ D YYCA W + G+ K+F EG +I+
Sbjct: 226 VSGICGTKYHVYKGTGSSYTFTMVN-LQASDSGIYYCAIWDNRREGWKKIFGEGANIIIT 402
Query: 136 PSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWK 184
P ++ L AD SPKPT+FLPS+AE N GTYLCLLEKFFPDVI V W+
Sbjct: 403 PPERNLAADTSPKPTVFLPSIAEINHDNAGTYLCLLEKFFPDVITVSWR 549
>gb|AF079123.1|AF079123 Canis familiaris clone TCRgV-J132 T cell receptor gamma V-J region
(TCRg) mRNA, partial cds
Length = 409
Score = 111 bits (278), Expect = 7e-23
Identities = 57/121 (47%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
Frame = +1
Query: 68 VATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSG-FHKVF 126
++ +Y QR + K K+ A K S + L + L+K DE YYCA W + G ++KV
Sbjct: 46 MSRSYVQRDIFVKADKVNAKKGRNSYSCNLLLQKLEKSDEGVYYCAAWEALRHGWYNKVL 225
Query: 127 AEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEK 186
GT L V +DK + D +PKPT+FLPS++E +HK GTYLCLLE FFP++I+V WKEK
Sbjct: 226 GPGTILRV--TDKSANEDTAPKPTVFLPSISEIKIHKAGTYLCLLEDFFPEIIKVDWKEK 399
Query: 187 N 187
N
Sbjct: 400 N 402
>gb|M26765.1|MUSG3VJ Mus musculus rearranged T-cell receptor gamma-3 chain gene,
variable and joining segments
Length = 347
Score = 87.0 bits (214), Expect(2) = 1e-21
Identities = 43/85 (50%), Positives = 55/85 (64%)
Frame = +3
Query: 29 RQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIEASK 88
R DE QISC V++ F + IHWYRQK NQ E+L+YV L ++KK+EASK
Sbjct: 6 RARDETAQISCKVFIKSFRSVTIHWYRQKPNQSLEFLLYVLATPTHIFLDKEYKKMEASK 185
Query: 89 DFKSSTSTLEINYLKKEDEATYYCA 113
D +STS L I L++EDEA YYC+
Sbjct: 186 DPSASTSILTIYSLEEEDEAIYYCS 260
Score = 41.2 bits (95), Expect(2) = 1e-21
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 119 SSGFHKVFAEGTKLIVIPS 137
SSGFHKVFAEGTKLIVIPS
Sbjct: 274 SSGFHKVFAEGTKLIVIPS 330
>emb|X86472.1|BATRGC31 B.acutorostrata TRGC gene, Tgamma 31 clone
Length = 192
Score = 107 bits (267), Expect = 1e-21
Identities = 47/64 (73%), Positives = 55/64 (85%)
Frame = +1
Query: 151 IFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKTKGTYMKFS 210
IFLPS+ E NLH GT+LCLLE FFPDVI+VYWKEKNGN +L+SQ+G+ +KT TYMKFS
Sbjct: 1 IFLPSIDEINLHGAGTHLCLLENFFPDVIKVYWKEKNGNIVLESQQGNIIKTNDTYMKFS 180
Query: 211 WLTV 214
WLTV
Sbjct: 181 WLTV 192
>emb|Z12299.1|MMTCRGV4M M.musculus rearranged T-cell receptor genes Vgamma4 and Jgamma1
Length = 322
Score = 107 bits (266), Expect = 2e-21
Identities = 56/108 (51%), Positives = 73/108 (66%)
Frame = +1
Query: 22 QTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKH 81
Q E+S++R DE QISC V++ F + IHWYRQK NQ E+L+YV L ++
Sbjct: 1 QPEISISRARDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEY 180
Query: 82 KKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEG 129
KK+EASK+ +STS L I L++EDEA YYC+ + SSGFHKVFAEG
Sbjct: 181 KKMEASKNPSASTSILTIYSLEEEDEAIYYCS-YA*YSSGFHKVFAEG 321
>gb|M13336.1|MUSTCGXF2 Mouse T-cell receptor rearranged gamma-chain V-region (V2-J1) gene,
exon 2, clones TC-(5,16,17, 19)
Length = 390
Score = 107 bits (266), Expect = 2e-21
Identities = 57/114 (50%), Positives = 74/114 (64%)
Frame = +1
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L G G+LEQ E+S++R DE QISC V++ F + IHWYRQK NQ E+L+YV
Sbjct: 55 LLAVGHGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLAT 234
Query: 72 YNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKV 125
L ++KK+EASK+ +STS L I L++EDEA YYC+ SSGFHKV
Sbjct: 235 PTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCS--YGYSSGFHKV 390
>emb|X86471.1|BATRGC117 B.acutorostrata TRGC gene, Tgamma 117 clone
Length = 193
Score = 107 bits (266), Expect = 2e-21
Identities = 46/63 (73%), Positives = 55/63 (87%)
Frame = +3
Query: 147 PKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGDTLKTKGTY 206
PKPTIFLPS+ E NLH+ GT+LCLLE FFPDVI+VYWKEKNGN +L+SQ+G+ +KT TY
Sbjct: 3 PKPTIFLPSIDEINLHEAGTHLCLLENFFPDVIKVYWKEKNGNIVLESQQGNIIKTNDTY 182
Query: 207 MKF 209
MKF
Sbjct: 183 MKF 191
>gb|U78284.1|U78284 Gallus gallus clone 10f1 T-cell receptor gamma Vg1-Jg1 mRNA,
partial cds
Length = 815
Score = 104 bits (259), Expect = 1e-20
Identities = 74/216 (34%), Positives = 106/216 (48%), Gaps = 4/216 (1%)
Frame = +1
Query: 20 LEQTELSVTRQTDENVQISCIVY-LPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG 78
L+Q + S TR+ + V I C V + F N IHWYRQ E L+YV
Sbjct: 199 LQQRQPSATRERSKTVTIQCHVEGIADFHNAYIHWYRQMPAGAPERLLYVTAVAQASYDS 378
Query: 79 GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSD 138
+K S + TL + + +D+ TYYCA + + ++KVF GTKLIV SD
Sbjct: 379 DSYKNKYTSSKMGNKICTLSVQDIGDDDKGTYYCAYRVLN---YYKVFGSGTKLIV--SD 543
Query: 139 KRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYW-KEKNGNTILDSQEG 197
K S P + + + K Y+CL+EKF+P+VIRV W E N + +G
Sbjct: 544 KG-----SSAPENY--EIMQEEHEKQVVYVCLIEKFYPEVIRVKWTDEANKEVTQNVVKG 702
Query: 198 DTLKTKG--TYMKFSWLTVPERAMGKEHSCIVKHEN 231
D K+ G Y +WL+VP + K +SC +HE+
Sbjct: 703 DVWKSPGEDKYSVSTWLSVPLESKNKIYSCTYEHES 810
>gb|AF440688.1|AF440688 Aotus nancymaae T cell receptor mRNA, partial cds
Length = 388
Score = 102 bits (253), Expect = 5e-20
Identities = 54/129 (41%), Positives = 82/129 (62%), Gaps = 1/129 (0%)
Frame = +1
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGG 79
LE ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++ R G
Sbjct: 10 LEHPQISSTKTPSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSDGAVRMESG 189
Query: 80 -KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSD 138
K E + ++STSTL I+ ++K+D ATYYCA W +G+ KVFAEGTKLIV P D
Sbjct: 190 ITSGKFEVDRVPETSTSTLTIHNVEKKDIATYYCAFW---EAGWIKVFAEGTKLIVTPPD 360
Query: 139 KRLDADISP 147
+ L ADISP
Sbjct: 361 EYLGADISP 387
>emb|Z22841.1|MMTCRVJAM M.musculus T cell receptor V gamma 4 and T cell receptor J gamma 1
mRNA
Length = 331
Score = 95.5 bits (236), Expect(2) = 6e-20
Identities = 47/95 (49%), Positives = 64/95 (66%)
Frame = +1
Query: 19 QLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG 78
+LEQ E+S++R DE QISC V++ F + IHWYRQK NQ E+L+YV L
Sbjct: 1 KLEQPEISISRARDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLD 180
Query: 79 GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA 113
++KK+EASK+ +STS L I L++EDEA YYC+
Sbjct: 181 KEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCS 285
Score = 26.9 bits (58), Expect(2) = 6e-20
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 119 SSGFHKVFAEG 129
SSGFHKVFAEG
Sbjct: 299 SSGFHKVFAEG 331
>gb|M27333.1|HUMTCRGAAC Homo sapiens (clone HGP03) T cell receptor gamma-chain processed
pseudogene mRNA, C2 region
Length = 786
Score = 101 bits (251), Expect = 9e-20
Identities = 44/58 (75%), Positives = 52/58 (88%)
Frame = +1
Query: 138 DKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQ 195
DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I+++W+EK NTIL SQ
Sbjct: 1 DKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKIHWQEKKSNTILGSQ 174
>gb|AF378702.1|AF378702 Anas platyrhynchos T-cell receptor gamma mRNA, complete cds
Length = 1030
Score = 100 bits (249), Expect = 2e-19
Identities = 74/239 (30%), Positives = 113/239 (46%), Gaps = 6/239 (2%)
Frame = +2
Query: 1 MLLLRWFTSCCLWVFGLGQLE--QTELSVTRQTDENVQISCIV--YLPYFSNTAIHWYRQ 56
MLLL + W +G Q QT +S+T+ + + ++ C F + IHWY+Q
Sbjct: 38 MLLLAALVATTTWSYGFAQETPIQTPISITK-SQGSTRLHCHFKDVSTNFDSIVIHWYQQ 214
Query: 57 KTNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWM 116
K N+ E + Y++T + + + K TL I + + ATYYCA W
Sbjct: 215 KENKAPERMFYISTGTTAVDESFQGRTYTIERVSKQKICTLTIKNIAPDVAATYYCAYW- 391
Query: 117 SDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFP 176
++KVF GTKLIV SD+ + P+ + L + + L Y+CL+E F+P
Sbjct: 392 ---DHYYKVFGTGTKLIV--SDR---GNSKPENSEILQTKHKDQL----LYVCLIENFYP 535
Query: 177 DVIRVYW-KEKNGNTILDSQEGDTLK-TKGTYMKFSWLTVPERAMGKEHSCIVKHENNK 233
+VIRV W E N + +GD K T Y +WLT+P K + C HE+ +
Sbjct: 536 EVIRVQWVDEANKEVTKNVIKGDVWKSTNDKYSVSTWLTLPGNTTNKNYYCKYDHESQE 712
>gb|U78261.1|U78261 Gallus gallus clone 9a1 T-cell receptor gamma Vg3-Jg3 mRNA, partial
cds
Length = 693
Score = 99.4 bits (246), Expect = 3e-19
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 6/237 (2%)
Frame = +1
Query: 1 MLLLRWFTSCCLWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
MLLL + + LW G Q + R+ E ++ L S T +HWYRQ +
Sbjct: 19 MLLLTFLVATSLWSRGDAQAVPMQRPSERRLVEGSLVTMTCQLS--SGTIVHWYRQLPGE 192
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMS--- 117
+ ++Y++ N +K + ++ S S L I + D TYYCA W
Sbjct: 193 PPKRILYMSGNSPTFDDSNDRQKFQVQRN--PSNSVLTIKKSTRRDTGTYYCAYWYKQGV 366
Query: 118 DSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPD 177
+ G+ K F GTKLIV S+K A + + + + K Y+CL+EKF+P+
Sbjct: 367 NGRGWIKYFGTGTKLIV--SNKGSSAPENYE-------IMQEEHEKQVVYVCLIEKFYPE 519
Query: 178 VIRVYW-KEKNGNTILDSQEGDTLKTKG--TYMKFSWLTVPERAMGKEHSCIVKHEN 231
VIRV W E N + +GD K+ G Y +WL+VP + K +SC +HE+
Sbjct: 520 VIRVKWTDEANKEVTQNVVKGDVWKSPGEDKYSVSTWLSVPLESKNKIYSCTYEHES 690
>emb|X86723.1|PTTRGC P.troglodytes mRNA for TcR gamma constant chain
Length = 166
Score = 97.8 bits (242), Expect = 1e-18
Identities = 42/55 (76%), Positives = 49/55 (88%)
Frame = +1
Query: 138 DKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTIL 192
DK LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I+++W+EK NTIL
Sbjct: 1 DKNLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKIHWQEKKSNTIL 165
>emb|X74775.1|HSTCRGP H.sapiens mRNA for TCR gamma V11 pseudogene
Length = 531
Score = 96.7 bits (239), Expect = 2e-18
Identities = 42/57 (73%), Positives = 50/57 (87%)
Frame = +1
Query: 138 DKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDS 194
DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPDVI+++W+EK N +L S
Sbjct: 361 DKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHWQEKKSNRLLGS 531
Score = 57.8 bits (138), Expect = 1e-06
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +2
Query: 17 LGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYV-ATNYNQR 75
LGQLEQ E+S++R +++ IS + FS+ IHWY QK N+ EYL++V T Q
Sbjct: 152 LGQLEQPEISISRPANKSAHISWKASIQGFSSKIIHWYWQKPNKGLEYLLHVFLTISAQD 331
Query: 76 PLGGKHKKIE 85
GGK KK+E
Sbjct: 332 CSGGKTKKLE 361
>emb|X02758.1|HSTRGG1D H.sapiens gene for T-cell receptor gamma constant region C1
(allotype lambda D 19)
Length = 178
Score = 96.3 bits (238), Expect = 3e-18
Identities = 41/55 (74%), Positives = 49/55 (88%)
Frame = +1
Query: 135 IPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGN 189
+P DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPDVI+++W+EK N
Sbjct: 13 LPIDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHWQEKKSN 177
>emb|X02757.1|HSTRGG1R H.sapiens gene for T-cell receptor gamma constant region (allotype
lambda R gamma)
Length = 178
Score = 95.9 bits (237), Expect = 4e-18
Identities = 40/55 (72%), Positives = 49/55 (88%)
Frame = +1
Query: 135 IPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGN 189
+P DK+LDAD+SPKPTIFLPS+AET L K GTYLCLLEKFFPD+I+++W+EK N
Sbjct: 13 LPIDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDIIKIHWQEKKSN 177
>emb|Y11227.1|HSTRGV11G H.sapiens TRGV11 gene
Length = 503
Score = 94.7 bits (234), Expect = 8e-18
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
Frame = +2
Query: 17 LGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRP 76
LGQLEQ E+S++R +++ IS + FS+ IHWY QK N+ EYL++V + +
Sbjct: 155 LGQLEQPEISISRPANKSAHISWKASIQGFSSKIIHWYWQKPNKGLEYLLHVFLTISAQD 334
Query: 77 L-GGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 120
GGK KK+E SK+ +STSTL+I +L+KEDE Y+CA W+ S
Sbjct: 335 CSGGKTKKLEVSKNAHTSTSTLKIKFLEKEDEVVYHCACWIRHHS 469
>gb|U78285.1|U78285 Gallus gallus clone 18a3 T-cell receptor gamma Vg1-Jg2 mRNA,
partial cds
Length = 659
Score = 94.4 bits (233), Expect = 1e-17
Identities = 60/168 (35%), Positives = 85/168 (49%), Gaps = 1/168 (0%)
Frame = +1
Query: 20 LEQTELSVTRQTDENVQISCIVY-LPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLG 78
L+Q +LS TR+ + V I C V + F N IHWYRQ E L+YV
Sbjct: 166 LQQHQLSATRERSKTVTIQCHVEGIADFHNAYIHWYRQMPAGAPERLLYVTAVAQVSYDS 345
Query: 79 GKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSD 138
+K S ++ TL + ++ +DE TYYCA W + G K+F GTKLIV SD
Sbjct: 346 DSYKNKYTSSKMENKICTLSVLNIRDDDEGTYYCAYW--EPRGDEKIFGSGTKLIV--SD 513
Query: 139 KRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEK 186
K A + + + + K Y+CL+EKF+P+VIRV W ++
Sbjct: 514 KGSSAPENYE-------IMQEEHEKQVVYVCLIEKFYPEVIRVKWTDE 636
>emb|Z48590.1|MMTCRGBV4 M.musculus mRNA for T-cell receptor gammaB-V4 segment
Length = 287
Score = 94.0 bits (232), Expect = 1e-17
Identities = 46/92 (50%), Positives = 62/92 (67%)
Frame = +1
Query: 22 QTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKH 81
Q E+S++R DE QISC V++ F + IHWYRQK NQ E+L+YV L ++
Sbjct: 1 QPEISISRARDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEY 180
Query: 82 KKIEASKDFKSSTSTLEINYLKKEDEATYYCA 113
KK+EASK+ +STSTL I L++EDEA YYC+
Sbjct: 181 KKMEASKNPSASTSTLTIYSLEEEDEAIYYCS 276
>gb|M27335.1|HUMTCRGAAE Human (clone HGP02) T cell receptor gamma-chain mRNA, V region
Length = 456
Score = 93.6 bits (231), Expect = 2e-17
Identities = 52/139 (37%), Positives = 84/139 (60%), Gaps = 3/139 (2%)
Frame = +1
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G G LEQ ++S T+ + ++ C+V S T+++WYR++ + ++L+ ++ +
Sbjct: 46 LCVYGAGHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYD 225
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW--MSDSSGFHKVFAE 128
R G K E + ++STSTL I+ ++K+D ATYYCA W + KVF
Sbjct: 226 GTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEKQDIATYYCALWEAQGELGKKIKVFGP 405
Query: 129 GTKLIVIPSDKRLDADISP 147
GTKLI+ +DK+LDAD+SP
Sbjct: 406 GTKLII--TDKQLDADVSP 456
>gb|AF079122.1|AF079122 Canis familiaris clone TCRgV-J131 T cell receptor gamma V-J region
(TCRg) pseudogene, partial mRNA sequence
Length = 407
Score = 77.0 bits (188), Expect(2) = 2e-17
Identities = 40/69 (57%), Positives = 48/69 (68%)
Frame = +2
Query: 119 SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDV 178
SS KVF GT L V +DK + DISPKPTIFLPS+AE H+ GTY+CLLE PD+
Sbjct: 203 SSWSKKVFGPGTILRV--TDKSPE-DISPKPTIFLPSIAEIKAHQVGTYICLLEDIIPDI 373
Query: 179 IRVYWKEKN 187
++ WKEKN
Sbjct: 374 FKIDWKEKN 400
Score = 37.0 bits (84), Expect(2) = 2e-17
Identities = 18/48 (37%), Positives = 26/48 (53%)
Frame = +1
Query: 68 VATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW 115
++ +Y QR + K K+ A K S + L + L+K DE YYCA W
Sbjct: 46 MSRSYVQRDIFVKADKVNAKKGRNSYSCNLLLQKLEKGDEGVYYCAAW 189
>gb|U73186.1|BTU73186 Bos taurus T cell receptor gamma chain variable region BVG3.1
precursor mRNA, partial cds
Length = 357
Score = 92.8 bits (229), Expect = 3e-17
Identities = 47/116 (40%), Positives = 70/116 (59%), Gaps = 4/116 (3%)
Frame = +1
Query: 4 LRWFTSCCLWVFG--LGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQ 61
L FT W FG L ++EQ ++S++ + +++ I C + F + +HWYRQK NQ
Sbjct: 10 LEAFTFFSFWTFGHGLSKVEQAQISLSTEAKKSIDIHCKIESTNFESDTVHWYRQKLNQV 189
Query: 62 FEYLIYVA--TNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW 115
E+L YV T ++ + GK+ KIEA KD + TSTL +N+++KED YYCA W
Sbjct: 190 LEHLAYVTSITTAARKQVDGKN-KIEARKDARMFTSTLTVNFIEKEDVGIYYCAGW 354
>gb|U78260.1|U78260 Gallus gallus clone 5d1 T-cell receptor gamma Vg3-Jg1 mRNA, partial
cds
Length = 576
Score = 92.4 bits (228), Expect = 4e-17
Identities = 63/194 (32%), Positives = 94/194 (47%), Gaps = 9/194 (4%)
Frame = +2
Query: 47 SNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKED 106
S T +HWYRQ + + ++Y++ +K + ++ S S L I + D
Sbjct: 20 SGTVVHWYRQLPGEPPKRILYMSGYSPTFDDSNDRQKFQVQRN--PSNSVLIITKSTRRD 193
Query: 107 EATYYCADWMSD------SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETN 160
TYYCA W S ++KVF GTKLIV SDK A + + + +
Sbjct: 194 TGTYYCAYWYYQGIPGRRSGYYYKVFGSGTKLIV--SDKGSSAPENYE-------IMQEE 346
Query: 161 LHKTGTYLCLLEKFFPDVIRVYW-KEKNGNTILDSQEGDTLKTKG--TYMKFSWLTVPER 217
K Y+CL+EKF+P+VIRV W E N + +GD K+ G Y +WL+VP
Sbjct: 347 HEKQVVYVCLIEKFYPEVIRVKWTDEANKEVTQNVVKGDVWKSPGEDKYSVSTWLSVPLE 526
Query: 218 AMGKEHSCIVKHEN 231
+ K +SC +HE+
Sbjct: 527 SKNKIYSCTYEHES 568
>gb|U73187.1|BTU73187 Bos taurus T cell receptor gamma chain variable region BVG3.2 mRNA,
partial cds
Length = 357
Score = 90.9 bits (224), Expect = 1e-16
Identities = 46/116 (39%), Positives = 70/116 (59%), Gaps = 4/116 (3%)
Frame = +1
Query: 4 LRWFTSCCLWVFGLG--QLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQ 61
L FT W GLG ++EQ ++S++ + +++ I C + F + ++WYRQK NQ
Sbjct: 10 LEAFTFLSFWASGLGLSKVEQAQISLSTEAKKSINIHCKIESTNFESEIVYWYRQKKNQA 189
Query: 62 FEYLIYV--ATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW 115
E+L+YV T + + GK+ KIEA KD + TSTL +N+++KED YYCA W
Sbjct: 190 LEHLVYVTSTTTAARNQVDGKN-KIEARKDARMFTSTLTVNFIEKEDVGIYYCAGW 354
>emb|X07207.1|HSTRGV11 Human non-productive rearranged V11 gene for T-cell receptor gammma
-chain (TRGV11 = J1)
Length = 518
Score = 90.9 bits (224), Expect = 1e-16
Identities = 48/98 (48%), Positives = 66/98 (66%), Gaps = 1/98 (1%)
Frame = +2
Query: 17 LGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYV-ATNYNQR 75
LGQLEQ E+S++R +++ IS + FS+ IHWY QK N+ EYL++V T Q
Sbjct: 155 LGQLEQPEISISRPANKSAHISWKASIQGFSSKIIHWYWQKPNKGLEYLLHVFLTISAQD 334
Query: 76 PLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCA 113
GGK KK+E SK+ +STSTL+I +L+KEDE Y+CA
Sbjct: 335 CSGGKTKKLEVSKNAHTSTSTLKIKFLEKEDEVVYHCA 448
>gb|M94349.1|MUSLIG Mus musculus immunoglobulin lambda chain (IgL) mRNA, complete cds
Length = 843
Score = 90.1 bits (222), Expect = 2e-16
Identities = 70/211 (33%), Positives = 102/211 (48%), Gaps = 4/211 (1%)
Frame = +1
Query: 26 SVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIE 85
SV+ V++SC N +HWY+Q + +IY + N+RP G +
Sbjct: 91 SVSTSLGSTVKLSCKRSTGNIGNNYVHWYQQYMGRSPTNMIY---DDNKRP-SGVSDRFS 258
Query: 86 ASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADI 145
S D S+++ L IN ++ EDEA YYC S SSG +VF GTKL V+ K
Sbjct: 259 GSIDSSSNSAFLTINNVQAEDEADYYC---QSYSSGV-QVFGGGTKLTVLSQPK-----T 411
Query: 146 SPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQE--GDTLKTK 203
SP T+F PS E +K T +C + F+P V+ V WK +G + E + +
Sbjct: 412 SPSVTLFPPSSEELETNK-ATLVCTISDFYPGVVTVDWK-ADGTPVTQGVETTQPSKQNN 585
Query: 204 GTYMKFSWLTVPERA--MGKEHSCIVKHENN 232
YM S+LT+ +A +SC V HE +
Sbjct: 586 NKYMASSYLTLTAKAWETHSSYSCQVTHEGH 678
>gb|U78259.1|U78259 Gallus gallus T-cell receptor gamma Vg2-Jg2 mRNA, partial cds
Length = 681
Score = 89.4 bits (220), Expect = 4e-16
Identities = 70/223 (31%), Positives = 100/223 (44%), Gaps = 8/223 (3%)
Frame = +2
Query: 1 MLLLRWFTSCCLWVFGLGQLE--QTELSVTRQTDENVQISCIV--YLPYFSNTAIHWYRQ 56
MLLL +W Q Q+ +S+T N + C + F NT IHWY+Q
Sbjct: 35 MLLLAALMVATVWPNAFAQETPIQSPVSITMSRG-NTDLKCHFKDFSGNFDNTVIHWYQQ 211
Query: 57 KTNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW- 115
K N+ ++Y + + + + TL I + +D ATYYCA W
Sbjct: 212 KENKAPVRMMYFTSGRTEVDESFQRHRYRIQTISTQKLCTLTIRNVIPDDAATYYCAYWD 391
Query: 116 MSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFF 175
D G K+F GTK IV SDK A + + + + K Y+CL+EKF+
Sbjct: 392 PRDERGDEKIFGSGTKPIV--SDKGSSAPENYE-------IMQEEHEKQVVYVCLIEKFY 544
Query: 176 PDVIRVYW-KEKNGNTILDSQEGDTLKTKG--TYMKFSWLTVP 215
P+VIRV W E N + +GD K+ G Y +WL+VP
Sbjct: 545 PEVIRVKWTDEANKEVTQNVVKGDVWKSPGEDKYSVSTWLSVP 673
>gb|AF333728.1| Aotus nancymaae clone 11192.6 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 391
Score = 89.4 bits (220), Expect = 4e-16
Identities = 46/124 (37%), Positives = 74/124 (59%), Gaps = 1/124 (0%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGT 130
R G K E + ++STSTL I+ ++K+D ATYYCA W + KVF GT
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATYYCAFWDREFGKKIKVFGPGT 368
Query: 131 KLIV 134
KLI+
Sbjct: 369 KLII 380
>gb|AF333716.1| Aotus nancymaae clone 11190.4 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 394
Score = 89.0 bits (219), Expect = 5e-16
Identities = 47/125 (37%), Positives = 75/125 (59%), Gaps = 2/125 (1%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEG 129
R G K E + ++STSTL I+ ++K+D ATYYCA W + G KVF G
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATYYCAFWETQEFGKKIKVFGPG 368
Query: 130 TKLIV 134
TKLI+
Sbjct: 369 TKLII 383
>gb|M94351.1|MUSCSIGLA Mus musculus immunoglobulin lambda chain (IgL) mRNA, complete cds
Length = 834
Score = 88.6 bits (218), Expect = 6e-16
Identities = 67/211 (31%), Positives = 100/211 (46%), Gaps = 4/211 (1%)
Frame = +1
Query: 26 SVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIE 85
SV+ V++SC N ++WY+Q + +IY +QRP G +
Sbjct: 82 SVSTSLGSTVKLSCKRSTGNIGNNYVNWYQQYMGRSPTNMIY---GDDQRPTGVSDR-FS 249
Query: 86 ASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADI 145
S D S+++ L IN ++ EDEA YYC + SD +VF GTKL V+ K
Sbjct: 250 GSIDSSSNSAFLTINNVQAEDEADYYCQSYSSDI----RVFGGGTKLTVLSQPK-----T 402
Query: 146 SPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQE--GDTLKTK 203
SP T+F PS E +K T +C + F+P V+ V WK +G + E + +
Sbjct: 403 SPSVTLFPPSSEELETNK-ATLVCTISDFYPGVVTVDWK-ADGTPVTQGVETTQPSKQNN 576
Query: 204 GTYMKFSWLTVPERA--MGKEHSCIVKHENN 232
YM S+LT+ +A +SC V HE +
Sbjct: 577 NKYMASSYLTLTAKAWETHSSYSCQVTHEGH 669
>gb|AF333717.1| Aotus nancymaae clone 11190.5 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 394
Score = 88.2 bits (217), Expect = 8e-16
Identities = 47/125 (37%), Positives = 74/125 (58%), Gaps = 2/125 (1%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEG 129
R G K E + ++STSTL I+ ++K+D ATYYCA W G KVF G
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATYYCAFWERQEFGKKIKVFGPG 368
Query: 130 TKLIV 134
TKLI+
Sbjct: 369 TKLII 383
>gb|AF333713.1| Aotus nancymaae clone 11190.1 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 394
Score = 88.2 bits (217), Expect = 8e-16
Identities = 47/125 (37%), Positives = 75/125 (59%), Gaps = 2/125 (1%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW-MSDSSGFHKVFAEG 129
R G K E + ++STSTL I+ ++K+D ATYYCA W M + KVF G
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATYYCAFWEMQEFGKKIKVFGPG 368
Query: 130 TKLIV 134
TKLI+
Sbjct: 369 TKLII 383
>emb|X57820.1|HSIGVL030 Human rearranged immunoglobulin lambda light chain mRNA
Length = 780
Score = 88.2 bits (217), Expect = 8e-16
Identities = 65/226 (28%), Positives = 104/226 (45%), Gaps = 11/226 (4%)
Frame = +3
Query: 18 GQLEQTEL----SVTRQTDENVQISCIVYLPY-FSNTAIHWYRQKTNQQFEYLIYVATNY 72
G L Q L S + + +V+++C++ + + I WY+QK YL+Y ++
Sbjct: 51 GSLSQPVLTQPSSHSASSGASVRLTCMLSSGFSVGDFWIRWYQQKPGNPPRYLLYYHSDS 230
Query: 73 NQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKL 132
N+ G + S D ++ L I+ L+ E EA YYC W S+S +VF GTKL
Sbjct: 231 NKGQGSGVPSRFSGSNDASANAGILRISGLQLEVEADYYCGTWHSNSKNV-RVFGGGTKL 407
Query: 133 IVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNG---- 188
V+ K +P T+F PS E +K T +CL+ F+P + V WK +
Sbjct: 408 TVLGQPK-----AAPSVTLFPPSSEELQANK-ATLVCLISDFYPGAVTVAWKADSSPVKA 569
Query: 189 --NTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHENN 232
T S++ + +Y+ LT + K +SC V HE +
Sbjct: 570 GVETTTPSKQSNNKYAASSYLS---LTPEQWKSHKSYSCQVTHEGS 698
>emb|Z13001.1|OATCVG23 O.aries rearranged T-cell receptor gamma
Length = 507
Score = 88.2 bits (217), Expect = 8e-16
Identities = 56/139 (40%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Frame = +3
Query: 22 QTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPL--GG 79
+ +LSVTR T +V I C + Y IHWY+ + L+Y Y++ L G
Sbjct: 111 EDKLSVTRATGSSVVIDCDLTQNY-----IHWYKFQEGTVPRRLLYYDVYYSKVVLDSGI 275
Query: 80 KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDK 139
K K S T I+ L++ D TYYCA W DSSG+ K+F + T+LIV D+
Sbjct: 276 SEGKYHVYKGTGKSY-TFVISNLQESDSGTYYCAVW-GDSSGWKKIFGKATELIVASPDR 449
Query: 140 RLDADISPKPTIFLPSVAE 158
LD D+SPKPT+FLPS+ E
Sbjct: 450 DLDKDMSPKPTMFLPSITE 506
>emb|Z11172.1|HSN1B12 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 222
Score = 88.2 bits (217), Expect = 8e-16
Identities = 42/69 (60%), Positives = 55/69 (78%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W S + K FA+GT+LIV DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEEGVSDWIKTFAKGTRLIVTSPDKQLDADVSPKPT 191
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 192 IFLPSIAET 218
>gb|L15321.1|MUSTCRGVX Mouse T cell receptor gamma V1 and V2 promoter regions
Length = 3510
Score = 84.7 bits (208), Expect = 9e-15
Identities = 42/57 (73%), Positives = 43/57 (74%), Gaps = 9/57 (15%)
Frame = +3
Query: 7 FTSCC---------LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWY 54
F CC L GLGQLEQTELSVTR+TDENVQISCIVYLPYFSNTAIHWY
Sbjct: 3339 FFKCCFLCS*ELFPLLAVGLGQLEQTELSVTRETDENVQISCIVYLPYFSNTAIHWY 3509
Score = 77.0 bits (188), Expect(2) = 1e-15
Identities = 36/43 (83%), Positives = 38/43 (87%)
Frame = -3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWY 54
L GLGQLEQTELSVTR+TDE+ QISCIV LPYFSNTAIHWY
Sbjct: 130 LLAVGLGQLEQTELSVTRETDESAQISCIVSLPYFSNTAIHWY 2
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/31 (70%), Positives = 25/31 (79%)
Frame = -1
Query: 56 QKTNQQFEYLIYVATNYNQRPLGGKHKKIEA 86
+KTNQQ EYLI+V T YNQ LGGK KK+EA
Sbjct: 1296 KKTNQQIEYLIHVWTKYNQHHLGGKKKKVEA 1204
Score = 38.1 bits (87), Expect = 0.93
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
Frame = +1
Query: 1 MLLLRWFTSCCLWV-----FGLGQLEQTELSVT 28
MLLLRWFTSCCLWV G G E +S++
Sbjct: 3244 MLLLRWFTSCCLWVCKWTFLGAGDSELILISIS 3342
Score = 31.2 bits (69), Expect(2) = 1e-15
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1
Query: 1 MLLLRWFTSCCLWV 14
MLLLRW T CCLWV
Sbjct: 255 MLLLRWPTFCCLWV 214
Score = 30.0 bits (66), Expect(2) = 7e-07
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -2
Query: 37 ISCIVYLPYFSNTAI 51
ISCIV LPYFSNT I
Sbjct: 1346 ISCIVSLPYFSNTVI 1302
>gb|AF333725.1| Aotus nancymaae clone 11192.18 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 394
Score = 87.8 bits (216), Expect = 1e-15
Identities = 47/125 (37%), Positives = 76/125 (60%), Gaps = 2/125 (1%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGVKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW-MSDSSGFHKVFAEG 129
R G K E + ++STSTL I+ ++K+D AT+YCA W M +S KVF G
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATHYCAFWEMRESGKKIKVFGPG 368
Query: 130 TKLIV 134
TKLI+
Sbjct: 369 TKLII 383
>gb|AF333722.1| Aotus nancymaae clone 11192.17 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 394
Score = 87.8 bits (216), Expect = 1e-15
Identities = 47/125 (37%), Positives = 75/125 (59%), Gaps = 2/125 (1%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW-MSDSSGFHKVFAEG 129
R G K E + ++STSTL I+ ++K+D ATYYCA W M + KVF G
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATYYCAFWEMREFGKKIKVFGPG 368
Query: 130 TKLIV 134
TKLI+
Sbjct: 369 TKLII 383
>gb|AF333719.1| Aotus nancymaae clone 11190.8 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 394
Score = 87.8 bits (216), Expect = 1e-15
Identities = 47/125 (37%), Positives = 75/125 (59%), Gaps = 2/125 (1%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW-MSDSSGFHKVFAEG 129
R G K E + ++STSTL I+ ++K+D ATYYCA W M + KVF G
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATYYCAFWEMPEFGKKIKVFGPG 368
Query: 130 TKLIV 134
TKLI+
Sbjct: 369 TKLII 383
>gb|AF333715.1| Aotus nancymaae clone 11190.3 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 394
Score = 87.8 bits (216), Expect = 1e-15
Identities = 47/125 (37%), Positives = 74/125 (58%), Gaps = 2/125 (1%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEG 129
R G K E + ++STSTL I+ ++K+D ATYYCA W G KVF G
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATYYCAFWEVQEFGKKIKVFGPG 368
Query: 130 TKLIV 134
TKLI+
Sbjct: 369 TKLII 383
>gb|L22290.1|RABTCRGAM Rabbit T-cell receptor gamma mRNA, partial cds
Length = 147
Score = 87.8 bits (216), Expect = 1e-15
Identities = 38/46 (82%), Positives = 44/46 (95%)
Frame = +2
Query: 156 VAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNGNTILDSQEGDTLK 201
+AET LHK GTYLCLLEKFFPDVI+VYWKEKNG+TIL+SQEG+T+K
Sbjct: 2 IAETKLHKAGTYLCLLEKFFPDVIKVYWKEKNGDTILESQEGNTMK 139
>emb|X02422.1|HSIGLBV Human mRNA for Ig lambda L-chain V(VI)-J-C
Length = 838
Score = 87.8 bits (216), Expect = 1e-15
Identities = 66/213 (30%), Positives = 100/213 (45%), Gaps = 6/213 (2%)
Frame = +1
Query: 26 SVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIE 85
SV+ + V ISC ++ + WY+Q+ +IY NQRPLG +
Sbjct: 172 SVSESPGKTVTISCTGNSGSIASNYVQWYQQRRVSAPTIVIY---EDNQRPLGVPDR-FS 339
Query: 86 ASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADI 145
S D S++++L I+ LK EDEA YYC + + + G VF GTKL V+ K
Sbjct: 340 GSIDSSSNSASLTISGLKTEDEADYYCQSFDNTNQG---VFGGGTKLTVLGQPK-----A 495
Query: 146 SPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNG------NTILDSQEGDT 199
+P T+F PS E +K T +CL+ F+P + V WK + T S++ +
Sbjct: 496 APSVTLFPPSSEELQANK-ATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNN 672
Query: 200 LKTKGTYMKFSWLTVPERAMGKEHSCIVKHENN 232
+Y+ LT + K +SC V HE +
Sbjct: 673 KYAASSYLS---LTPEQWKSHKSYSCQVTHEGS 762
>emb|X57815.1|HSIGVL025 Human rearranged immunoglobulin lambda light chain mRNA
Length = 810
Score = 87.4 bits (215), Expect = 1e-15
Identities = 75/241 (31%), Positives = 106/241 (43%), Gaps = 10/241 (4%)
Frame = +3
Query: 2 LLLRWFTSCCLWVFGLGQLEQTEL----SVTRQTDENVQISCIVYLPYFSNTAIHWYRQK 57
LLL T C G Q+ L S + + V ISC ++WY+Q
Sbjct: 21 LLLTLLTHCA------GSWAQSVLTQPPSASGTPGQRVTISCSGASSNIGTNDVYWYQQL 182
Query: 58 TNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMS 117
T + LIY NQRP G + SK S+++L I+ L+ EDEA YYCA W
Sbjct: 183 TGTAPKLLIY---RNNQRP-SGVPDRFSGSKS--GSSASLAISGLQSEDEADYYCAAWDD 344
Query: 118 DSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPD 177
SG VF GTKL V+ K +P T+F PS E +K T +CL+ F+P
Sbjct: 345 SLSG--PVFGGGTKLTVLGQPK-----AAPSVTLFPPSSEELQANK-ATLVCLISDFYPG 500
Query: 178 VIRVYWKEKNG------NTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHEN 231
+ V WK + T S++ + +Y+ LT + + +SC V HE
Sbjct: 501 AVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLS---LTPEQWKSHRSYSCQVTHEG 671
Query: 232 N 232
+
Sbjct: 672 S 674
>gb|AF333720.1| Aotus nancymaae clone 11190.10 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 394
Score = 87.4 bits (215), Expect = 1e-15
Identities = 47/125 (37%), Positives = 75/125 (59%), Gaps = 2/125 (1%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW-MSDSSGFHKVFAEG 129
R G K E + ++STSTL I+ ++K+D ATYYCA W M + KVF G
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATYYCAFWEMLEFGKKIKVFGPG 368
Query: 130 TKLIV 134
TKLI+
Sbjct: 369 TKLII 383
>gb|AF333718.1| Aotus nancymaae clone 11190.6 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 394
Score = 87.4 bits (215), Expect = 1e-15
Identities = 47/125 (37%), Positives = 74/125 (58%), Gaps = 2/125 (1%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEG 129
R G K E + ++STSTL I+ ++K+D ATYYCA W G KVF G
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATYYCAFWEIGEFGKKIKVFGPG 368
Query: 130 TKLIV 134
TKLI+
Sbjct: 369 TKLII 383
>gb|AF333714.1| Aotus nancymaae clone 11190.2 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 394
Score = 87.0 bits (214), Expect = 2e-15
Identities = 47/125 (37%), Positives = 75/125 (59%), Gaps = 2/125 (1%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW-MSDSSGFHKVFAEG 129
R G K E + ++STSTL I+ ++K+D ATYYCA W M + KVF G
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATYYCAFWEMWEFGKKIKVFGPG 368
Query: 130 TKLIV 134
TKLI+
Sbjct: 369 TKLII 383
>emb|X86720.1|GGTRGV10 G.gorilla TRGV10 gene
Length = 480
Score = 87.0 bits (214), Expect = 2e-15
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Frame = +1
Query: 16 GLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYN-- 73
GL ++EQ +LS++ + +++ I C + F IHWYRQK NQ E+LIY+ + +
Sbjct: 163 GLSKVEQFQLSISTEVKKSIDIPCKISSTKFETDVIHWYRQKPNQALEHLIYIVSTKSAA 342
Query: 74 QRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW 115
+R +G K+EA K+ ++ TS L I ++KED A YYCA W
Sbjct: 343 RRSMGKTSNKVEARKNSQTLTSILTIKSIEKEDMAVYYCAAW 468
>gb|AF321283.1|AF321283 Trichosurus vulpecula clone L5 immunoglobulin lambda light chain
mRNA, complete cds
Length = 881
Score = 86.7 bits (213), Expect = 2e-15
Identities = 75/243 (30%), Positives = 115/243 (46%), Gaps = 12/243 (4%)
Frame = +3
Query: 2 LLLRWFTSCC-LWV-FGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTN 59
LL+ FT C W F L Q SV+ ++V ISC + + WY+Q
Sbjct: 60 LLISLFTLCQGAWAKFVLTQ----PASVSGSLGQSVMISCTRSSGNIGSYYVSWYQQHQG 227
Query: 60 QQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDS 119
Q + +IY +++RP G ++ SKD +++++L I+ L+ EDEA YYC + S S
Sbjct: 228 QSPKLIIY---EWSKRP-SGIPERFSGSKDTSANSASLSISGLQAEDEADYYCLSYDSSS 395
Query: 120 SGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVI 179
++VF EGT + V+ K SP +F PS E + K T +CLL F+P +
Sbjct: 396 ---YRVFGEGTHVTVLGQPK-----ASPTVNVFAPSQEELDT-KKATLVCLLSGFYPGTV 548
Query: 180 RVYWKEKNG-------NTILDSQEGDTLKTKGTYMKFS---WLTVPERAMGKEHSCIVKH 229
V W KNG +T S++ D + +Y+ S WL+ +C V H
Sbjct: 549 DVAW-TKNGSPVSQGVDTTRPSRQSDNKYSASSYLSLSSDQWLS------ADIFTCKVTH 707
Query: 230 ENN 232
E +
Sbjct: 708 EGS 716
>emb|X05503.1|HSTRG10R Human rearranged TRGV10-J2 gene for T-cell receptor gamma chain
Length = 537
Score = 86.7 bits (213), Expect = 2e-15
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Frame = +2
Query: 16 GLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYN-- 73
GL ++EQ +LS++ + +++ I C + F IHWYRQK NQ E+LIY+ + +
Sbjct: 161 GLSKVEQFQLSISTEVKKSIDIPCKISSTRFETDVIHWYRQKPNQALEHLIYIVSTKSAA 340
Query: 74 QRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW 115
+R +G K+EA K+ ++ TS L I ++KED A YYCA W
Sbjct: 341 RRSMGKTSNKVEARKNSQTLTSILTIKSVEKEDMAVYYCAAW 466
>emb|X86718.1|PPTRGV10 P.paniscus TRGV10 gene
Length = 483
Score = 86.7 bits (213), Expect = 2e-15
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Frame = +1
Query: 16 GLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYN-- 73
GL ++EQ +LS++ + +++ I C + F IHWYRQK NQ E+LIY+ + +
Sbjct: 163 GLSKVEQFQLSISTEVKKSIDIPCKISSTKFETDVIHWYRQKPNQALEHLIYIVSTKSAA 342
Query: 74 QRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW 115
+R +G K+EA K+ ++ TS L I ++KED A YYCA W
Sbjct: 343 RRSMGKTSNKVEARKNSQTLTSILTIKSIEKEDMAIYYCAAW 468
>emb|X74798.1|HSTRGV H.sapiens TRGV10 gene, allele V10*A2
Length = 493
Score = 86.7 bits (213), Expect = 2e-15
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Frame = +2
Query: 16 GLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYN-- 73
GL ++EQ +LS++ + +++ I C + F IHWYRQK NQ E+LIY+ + +
Sbjct: 161 GLSKVEQFQLSISTEVKKSIDIPCKISSTRFETDVIHWYRQKPNQALEHLIYIVSTKSAA 340
Query: 74 QRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW 115
+R +G K+EA K+ ++ TS L I ++KED A YYCA W
Sbjct: 341 RRSMGKTSNKVEARKNSQTLTSILTIKSVEKEDMAVYYCAAW 466
>emb|X07206.1|HSTRGV10 H.sapiens TRGV10 gene, allele V10*A1
Length = 520
Score = 86.7 bits (213), Expect = 2e-15
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Frame = +2
Query: 16 GLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYN-- 73
GL ++EQ +LS++ + +++ I C + F IHWYRQK NQ E+LIY+ + +
Sbjct: 161 GLSKVEQFQLSISTEVKKSIDIPCKISSTRFETDVIHWYRQKPNQALEHLIYIVSTKSAA 340
Query: 74 QRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW 115
+R +G K+EA K+ ++ TS L I ++KED A YYCA W
Sbjct: 341 RRSMGKTSNKVEARKNSQTLTSILTIKSVEKEDMAVYYCAAW 466
>emb|X86558.1|PTTRGV10 P.troglodytes TRGV10 gene
Length = 514
Score = 86.7 bits (213), Expect = 2e-15
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Frame = +1
Query: 16 GLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYN-- 73
GL ++EQ +LS++ + +++ I C + F IHWYRQK NQ E+LIY+ + +
Sbjct: 163 GLSKVEQFQLSISTEVKKSIDIPCKISSTKFETDVIHWYRQKPNQALEHLIYIVSTKSAA 342
Query: 74 QRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW 115
+R +G K+EA K+ ++ TS L I ++KED A YYCA W
Sbjct: 343 RRSMGKTSNKVEARKNSQTLTSILTIKSIEKEDMAIYYCAAW 468
>gb|AF321280.1|AF321280 Trichosurus vulpecula clone L1 immunoglobulin lambda light chain
mRNA, complete cds
Length = 872
Score = 86.7 bits (213), Expect = 2e-15
Identities = 77/243 (31%), Positives = 115/243 (46%), Gaps = 12/243 (4%)
Frame = +2
Query: 2 LLLRWFTSCC-LWV-FGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTN 59
LL+ FT C W F L Q SV+ ++V ISC + + WY+Q
Sbjct: 59 LLISLFTLCQGAWAKFVLTQ----PASVSGSLGQSVMISCTRSSGNIGSYYVSWYQQHQG 226
Query: 60 QQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDS 119
Q + +IY +++RP G ++ SKD +++++L I+ L+ EDEA YYC + DS
Sbjct: 227 QSPKLIIY---EWSKRP-SGIPERFSGSKDTSANSASLSISGLQAEDEADYYCLSY--DS 388
Query: 120 SGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVI 179
S + +F GT+L VI K SP +F PS E + K T +CLL F+P +
Sbjct: 389 SSY--IFGGGTQLTVIGQPK-----ASPTVNVFAPSQEELDT-KKATLVCLLSGFYPGTV 544
Query: 180 RVYWKEKNG-------NTILDSQEGDTLKTKGTYMKFS---WLTVPERAMGKEHSCIVKH 229
V W KNG +T S++ D + +Y+ S WL+ SC V H
Sbjct: 545 DVAW-TKNGSPVSQGVDTTRPSRQSDNKYSASSYLSLSSDQWLS------ADTFSCKVTH 703
Query: 230 ENN 232
E +
Sbjct: 704 EGS 712
>gb|AF191795.1|AF191795 Homo sapiens immunoglobulin lambda light chain gene, partial cds
Length = 648
Score = 86.3 bits (212), Expect = 3e-15
Identities = 64/206 (31%), Positives = 96/206 (46%), Gaps = 6/206 (2%)
Frame = +1
Query: 33 ENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKS 92
+ V ISC + +++WY+Q + L Y NQRP G + SK
Sbjct: 46 QRVTISCSGSISNIGINSVYWYQQLPGTAPKLLFY---RNNQRP-SGVPDRFSVSKS--G 207
Query: 93 STSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIF 152
++++L I+ L+ EDEA YYCA W SG+ VF GTKL V+ K +P T+F
Sbjct: 208 TSASLAISGLRSEDEADYYCAGWDDSLSGW--VFGGGTKLTVLGQPK-----AAPSVTLF 366
Query: 153 LPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNG------NTILDSQEGDTLKTKGTY 206
PS E +K T +CL+ F+P + V WK + T S++ + +Y
Sbjct: 367 PPSSEELQANK-ATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSY 543
Query: 207 MKFSWLTVPERAMGKEHSCIVKHENN 232
+ LT + K +SC V HE +
Sbjct: 544 LS---LTPEQWKSHKSYSCQVTHEGS 612
>gb|AF333731.1| Aotus nancymaae clone 11192.24 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 397
Score = 86.3 bits (212), Expect = 3e-15
Identities = 46/126 (36%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW--MSDSSGFHKVFAE 128
R G K E + ++STSTL I+ ++K+D ATYYCA W + + KVF
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATYYCAFWERIQEFGKKIKVFGP 368
Query: 129 GTKLIV 134
GTKLI+
Sbjct: 369 GTKLII 386
>gb|AF333729.1| Aotus nancymaae clone 11192.5 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 394
Score = 85.9 bits (211), Expect = 4e-15
Identities = 46/125 (36%), Positives = 75/125 (59%), Gaps = 2/125 (1%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGVKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW-MSDSSGFHKVFAEG 129
R G K E + ++STSTL I+ ++K+D AT+YCA W M + KVF G
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATHYCAFWEMKEFGKKIKVFGPG 368
Query: 130 TKLIV 134
TKLI+
Sbjct: 369 TKLII 383
>gb|AF333726.1| Aotus nancymaae clone 11192.20 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 394
Score = 85.9 bits (211), Expect = 4e-15
Identities = 46/125 (36%), Positives = 74/125 (58%), Gaps = 2/125 (1%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGVKISGTSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEG 129
R G K E + ++STSTL I+ ++K+D AT+YCA W G KVF G
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATHYCAFWERQEFGKKIKVFGPG 368
Query: 130 TKLIV 134
TKLI+
Sbjct: 369 TKLII 383
>gb|AF333724.1| Aotus nancymaae clone 11192.16 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 394
Score = 85.5 bits (210), Expect = 5e-15
Identities = 46/125 (36%), Positives = 75/125 (59%), Gaps = 2/125 (1%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGVKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW-MSDSSGFHKVFAEG 129
R G K E + ++STSTL I+ ++K+D AT+YCA W M + KVF G
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATHYCAFWEMREFGKKIKVFGPG 368
Query: 130 TKLIV 134
TKLI+
Sbjct: 369 TKLII 383
>gb|AF321281.1|AF321281 Trichosurus vulpecula clone L10 immunoglobulin lambda light chain
mRNA, complete cds
Length = 886
Score = 85.5 bits (210), Expect = 5e-15
Identities = 66/217 (30%), Positives = 102/217 (46%), Gaps = 10/217 (4%)
Frame = +3
Query: 26 SVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIE 85
SV+ ++V ISC + + WY+Q Q + +IY +Y+ P G ++
Sbjct: 123 SVSGSLGQSVTISCTRSSGNIGSDYVQWYQQHQGQAPKLIIY---SYSNHP-SGIPERFS 290
Query: 86 ASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADI 145
SKD +++++L I+ L+ EDEA YYC SS + VF EGT + V+ K
Sbjct: 291 GSKDTSANSASLTISGLQAEDEADYYCQSAYYKSSYYTWVFGEGTHVTVLGQPK-----A 455
Query: 146 SPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNG-------NTILDSQEGD 198
SP +F PS E + K T +CLL F+P + V W KNG +T S++ D
Sbjct: 456 SPTVNVFAPSQEELDT-KKATLVCLLSGFYPGTVDVAW-TKNGSPVSQGVDTTRPSRQSD 629
Query: 199 TLKTKGTYMKFS---WLTVPERAMGKEHSCIVKHENN 232
+ +Y+ S WL+ +C V HE +
Sbjct: 630 NKYSASSYLSLSSDQWLS------ADIFTCKVTHEGS 722
>gb|AF333727.1| Aotus nancymaae clone 11192.2 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 397
Score = 85.5 bits (210), Expect = 5e-15
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW--MSDSSGFHKVFAE 128
R G K E + ++STSTL I+ ++K+D ATYYCA W + KVF
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATYYCAFWEITQEFGKKIKVFGP 368
Query: 129 GTKLIV 134
GTKLI+
Sbjct: 369 GTKLII 386
>emb|Z11276.1|HSN3TB13 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 228
Score = 85.1 bits (209), Expect = 7e-15
Identities = 43/71 (60%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSD--SSGFHKVFAEGTKLIVIPSDKRLDADISPK 148
++ST+TL I+ ++K+D ATYYCA W S S + K FA+GT+LIV DK+LDAD+SPK
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWDSGW*GSDWIKTFAKGTRLIVTSPDKQLDADVSPK 191
Query: 149 PTIFLPSVAET 159
PTIFLPS+AET
Sbjct: 192 PTIFLPSIAET 224
>gb|AF018265.1|AF018265 Synthetic construct RSV neutralizing human Ig lambda chain with
leader (IgL) mRNA, complete cds
Length = 720
Score = 85.1 bits (209), Expect = 7e-15
Identities = 65/213 (30%), Positives = 99/213 (45%), Gaps = 6/213 (2%)
Frame = +1
Query: 26 SVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIE 85
SV+ + V ISC ++ + WY+Q+ +IY NQRP G +
Sbjct: 91 SVSESLGKTVTISCTRAGGSIASNYVQWYQQRPGSSPTTVIY---EDNQRPFGVPDR-FS 258
Query: 86 ASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADI 145
S D S++++L I+ LK EDEA YYC + S++ VF GTKL V+ K
Sbjct: 259 GSIDTSSNSASLTISGLKTEDEADYYCQSYDSENPW---VFGGGTKLTVLGQPK-----A 414
Query: 146 SPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWK------EKNGNTILDSQEGDT 199
+P T+F PS E +K T +CL+ F+P + V WK + T S++ +
Sbjct: 415 APSVTLFPPSSEELQANK-ATLVCLISDFYPGAVTVAWKADSRPVKAGVETTTPSKQSNN 591
Query: 200 LKTKGTYMKFSWLTVPERAMGKEHSCIVKHENN 232
+Y+ LT + K +SC V HE +
Sbjct: 592 KYAASSYLS---LTPEQWKSHKSYSCQVTHEGS 681
>gb|AF333721.1| Aotus nancymaae clone 11192.10 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 394
Score = 84.7 bits (208), Expect = 9e-15
Identities = 46/125 (36%), Positives = 73/125 (57%), Gaps = 2/125 (1%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEG 129
R G K E + ++STSTL I+ ++K+ ATYYCA W G KVF G
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKGIATYYCAFWEFGEFGKKIKVFGPG 368
Query: 130 TKLIV 134
TKLI+
Sbjct: 369 TKLII 383
>gb|AF333723.1| Aotus nancymaae clone 11192.15 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 397
Score = 84.7 bits (208), Expect = 9e-15
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMS--DSSGFHKVFAE 128
R G K E + ++STSTL I+ ++K+D ATYYCA W + KVF
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATYYCAFWEMPLEFGKKIKVFGP 368
Query: 129 GTKLIV 134
GTKLI+
Sbjct: 369 GTKLII 386
>emb|Z11217.1|HSN2B5 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 216
Score = 84.7 bits (208), Expect = 9e-15
Identities = 42/69 (60%), Positives = 55/69 (78%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W +S KVF GTKLI+ +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEQESGKKIKVFGPGTKLII--TDKQLDADVSPKPT 185
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 186 IFLPSIAET 212
>gb|L76575.1|XELIGL01 Xenopus laevis immunoglobulin light chain type III mRNA, partial
cds
Length = 1104
Score = 84.3 bits (207), Expect = 1e-14
Identities = 70/237 (29%), Positives = 110/237 (45%), Gaps = 5/237 (2%)
Frame = +3
Query: 2 LLLRWFTSCCLWVFGLGQLEQTE-LSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQ 60
+LL TS C + Q+ T+ +S + + E V+ISC + S ++WY+QK
Sbjct: 18 VLLLSLTSLC--TYSAAQVSITQPVSESVKLGETVRISCTLSGASISGYHVNWYQQKAGN 191
Query: 61 QFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSS 120
+ YL+ ++ N+ G + SKD ++ L I ED+A YYCA W + S
Sbjct: 192 RPRYLLRFYSDSNKHQGDGVPDRFSGSKDSPNNIGYLTIKGALLEDDADYYCATWHASSC 371
Query: 121 GFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIR 180
+F GT+L V+ D + +P +IF PSV E K T +C L F P
Sbjct: 372 ----IFGGGTQLTVLTGDVK-----APSVSIFPPSVEEI-ATKKATVVCSLSDFTPRGAT 521
Query: 181 VYWKEKNGNTILDSQEGDTL--KTKGTYMKFSW--LTVPERAMGKEHSCIVKHENNK 233
V W +G DS + L ++ YM+ S+ LT + + +SC V H+ +
Sbjct: 522 VKWL-VDGKDQTDSVQSSGLSKQSDNLYMESSYLSLTADQWLRHETYSCKVSHQGKE 689
>gb|AF333732.1| Aotus nancymaae clone 11192.22 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 397
Score = 84.3 bits (207), Expect = 1e-14
Identities = 47/127 (37%), Positives = 75/127 (59%), Gaps = 4/127 (3%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L V+G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCVYGAAHLEQPQISSTKTLSKTARLECVVYGVKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFH---KVFA 127
R G K E + ++STSTL I+ ++K+D AT+YCA W D F KVF
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATHYCAFW-EDGMEFGKKIKVFG 365
Query: 128 EGTKLIV 134
GTKLI+
Sbjct: 366 PGTKLII 386
>gb|S60175.1|S60175 TCR V3-JP2-C gamma 2=T cell receptor gamma chain variable {V-J
junction} [human, mRNA Mutant, 339 nt]
Length = 339
Score = 84.0 bits (206), Expect = 1e-14
Identities = 41/71 (57%), Positives = 50/71 (69%), Gaps = 1/71 (1%)
Frame = +1
Query: 97 LEINYLKKEDEATYYCADW-MSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPS 155
L + L + D YYCA W SD S + K FA+GT+LIV DK+LDAD+SPKPTIFLPS
Sbjct: 127 LRLQNLIENDSGVYYCATWDRSDGSDWIKTFAKGTRLIVTSPDKQLDADVSPKPTIFLPS 306
Query: 156 VAETNLHKTGT 166
+AET L K G+
Sbjct: 307 IAETKLQKAGS 339
>emb|X57817.1|HSIGVL027 Human rearranged immunoglobulin lambda light chain mRNA
Length = 750
Score = 83.6 bits (205), Expect = 2e-14
Identities = 72/241 (29%), Positives = 106/241 (43%), Gaps = 10/241 (4%)
Frame = +1
Query: 2 LLLRWFTSCCLWVFGLGQLEQTEL----SVTRQTDENVQISCIVYLPYFSNTAIHWYRQK 57
LLL T C G Q+ L S + + V ISC + ++WY+Q
Sbjct: 10 LLLTLLTHCA------GSWAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQL 171
Query: 58 TNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMS 117
+ LIY NQRP G + SK ++++L I+ L+ EDEA YYCA W
Sbjct: 172 PGTAPKLLIY---RNNQRP-SGVPDRFSGSKS--GTSASLAISGLQSEDEADYYCAAWDD 333
Query: 118 DSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPD 177
+G VF GTKL V+ K +P T+F PS E +K T +CL+ F+P
Sbjct: 334 SLNGV--VFGGGTKLTVLGQPK-----AAPSVTLFPPSSEELQANK-ATLVCLISDFYPG 489
Query: 178 VIRVYWKEKNG------NTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHEN 231
+ V WK + T S++ + +Y+ LT + + +SC V HE
Sbjct: 490 AVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLS---LTPEQWKSHRSYSCQVTHEG 660
Query: 232 N 232
+
Sbjct: 661 S 663
>gb|AF378744.1|AF378744 Aotus nancymaae clone Y9-9 T-cell receptor gamma chain V-J region
mRNA, partial cds
Length = 364
Score = 83.6 bits (205), Expect = 2e-14
Identities = 44/117 (37%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Frame = +1
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGG 79
LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++ R G
Sbjct: 10 LEQPQISSTKTLSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSDGAVRMESG 189
Query: 80 -KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIV 134
K E + ++STSTL I+ ++K+D ATYYCA W + G KVF GTKLI+
Sbjct: 190 ITSGKFEVDRVPETSTSTLTIHNVEKKDIATYYCAFWETQEFGKKIKVFGPGTKLII 360
>gb|AF378742.1|AF378742 Aotus nancymaae clone S1-9 T-cell receptor gamma chain V-J region
mRNA, partial cds
Length = 364
Score = 83.6 bits (205), Expect = 2e-14
Identities = 44/117 (37%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Frame = +1
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGG 79
LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++ R G
Sbjct: 10 LEQPQISSTKTLSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSDGAVRMESG 189
Query: 80 -KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIV 134
K E + ++STSTL I+ ++K+D ATYYCA W + G KVF GTKLI+
Sbjct: 190 ITSGKFEVDRVPETSTSTLTIHNVEKKDIATYYCAFWETQEFGKKIKVFGPGTKLII 360
>emb|Z11307.1|HSS1B78 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 216
Score = 83.6 bits (205), Expect = 2e-14
Identities = 41/69 (59%), Positives = 55/69 (79%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W+ + KVF GTKLI+ +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWVQELGKKIKVFGPGTKLII--TDKQLDADVSPKPT 185
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 186 IFLPSIAET 212
>emb|Z11207.1|HSN2B12 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 216
Score = 83.6 bits (205), Expect = 2e-14
Identities = 40/69 (57%), Positives = 56/69 (80%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W + S+ + K+F GT L+V +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEARSNYYKKLFGSGTTLVV--TDKQLDADVSPKPT 185
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 186 IFLPSIAET 212
>emb|Z11187.1|HSN1B28 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 216
Score = 83.6 bits (205), Expect = 2e-14
Identities = 41/69 (59%), Positives = 55/69 (79%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W+ + KVF GTKLI+ +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWVQELGKKIKVFGPGTKLII--TDKQLDADVSPKPT 185
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 186 IFLPSIAET 212
>emb|X57812.1|HSIGVL022 Human rearranged immunoglobulin lambda light chain mRNA
Length = 803
Score = 83.2 bits (204), Expect = 3e-14
Identities = 59/192 (30%), Positives = 91/192 (46%), Gaps = 6/192 (3%)
Frame = +1
Query: 47 SNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKED 106
++ ++HWY+QK Q ++Y + RP G + S +T+TL I+ ++ D
Sbjct: 148 ASKSVHWYQQKPGQAPVLVVY---GDSDRPSGIPER---FSGSNSGNTATLNISRVEAGD 309
Query: 107 EATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGT 166
EA YYC W DSS H VF GTKL V+ K +P T+F PS E +K T
Sbjct: 310 EAAYYCQVW--DSSSDHVVFGGGTKLTVLGQPK-----AAPSVTLFPPSSEELQANK-AT 465
Query: 167 YLCLLEKFFPDVIRVYWKEKNG------NTILDSQEGDTLKTKGTYMKFSWLTVPERAMG 220
+CL+ F+P + V WK + T S++ + +Y+ LT +
Sbjct: 466 LVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLS---LTPEQWKSH 636
Query: 221 KEHSCIVKHENN 232
+ +SC V HE +
Sbjct: 637 RSYSCQVTHEGS 672
>gb|L38567.1|HSL38567 Human clone tat16Fab, immunoglobulin lambda light chain, V1-J-C1
region, partial cds
Length = 498
Score = 83.2 bits (204), Expect = 3e-14
Identities = 58/159 (36%), Positives = 76/159 (47%)
Frame = +1
Query: 26 SVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIE 85
SV+ + V ISC N + WY+Q + LIY N RP G +
Sbjct: 13 SVSAAPGQKVTISCSGSTSNIGNRHVSWYQQLPGTAPKLLIY---ENNIRP-SGIPDRFS 180
Query: 86 ASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADI 145
ASK +++TL+I L+ DEA YYC W S S H VF GTKL V+ K
Sbjct: 181 ASKS--GTSATLDITGLQTGDEADYYCGTWDSSLSTGHWVFGGGTKLTVLSQPK-----A 339
Query: 146 SPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWK 184
+P T+F PS E +K T +CL+ FFP + V WK
Sbjct: 340 APSVTLFPPSSEELQANK-ATLVCLISDFFPGAVTVAWK 453
>emb|X86719.1|HLTRGV10 H.lar TRGV10 gene
Length = 514
Score = 83.2 bits (204), Expect = 3e-14
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = +1
Query: 16 GLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYN-- 73
GL ++EQ +LS++ + +++ I C V F IHWYRQK NQ E+LIY+ + +
Sbjct: 163 GLSKVEQFQLSISTEVKKSIDIPCKVSSTQFETDVIHWYRQKPNQGLEHLIYIISTKSTA 342
Query: 74 QRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW 115
Q +G K+EA K+ ++ TS L I + KED A YYCA W
Sbjct: 343 QVSMGKTGNKLEARKNSQTLTSILTIKSIGKEDMAIYYCAAW 468
>emb|X57822.1|HSIGVL032 Human rearranged immunoglobulin lambda light chain mRNA
Length = 802
Score = 82.8 bits (203), Expect = 3e-14
Identities = 70/241 (29%), Positives = 107/241 (44%), Gaps = 10/241 (4%)
Frame = +2
Query: 2 LLLRWFTSCCLWVFGLGQLEQTEL----SVTRQTDENVQISCIVYLPYFSNTAIHWYRQK 57
LLL T C G Q+ L S + + V ISC + ++WY+Q
Sbjct: 14 LLLTLLTHCA------GSWAQSVLTQPPSASGTPGQRVTISCSGSTSNIGSNTVNWYQQL 175
Query: 58 TNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMS 117
+ LIY N N+RP G + SK ++++L I+ L+ +DEA YYCA W
Sbjct: 176 PGTAPKVLIY---NNNERP-SGVPDRFSGSKS--GTSASLAISGLQSDDEADYYCAAWDD 337
Query: 118 DSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPD 177
+G ++ GTKL V+ K +P T+F PS E +K T +CL+ F+P
Sbjct: 338 SLNG--RLLGGGTKLTVLGQPK-----AAPSVTLFPPSSEELQANK-ATLVCLISDFYPG 493
Query: 178 VIRVYWKEKNG------NTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHEN 231
+ V WK + T S++ + +Y+ LT + K +SC V HE
Sbjct: 494 AVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLS---LTPEQWKSHKSYSCQVTHEG 664
Query: 232 N 232
+
Sbjct: 665 S 667
>gb|AF333730.1| Aotus nancymaae clone 11192.25 T-cell receptor gamma chain V-J
region mRNA, partial cds
Length = 397
Score = 82.8 bits (203), Expect = 3e-14
Identities = 44/126 (34%), Positives = 74/126 (57%), Gaps = 3/126 (2%)
Frame = +3
Query: 12 LWVFGLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATN 71
L ++G LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++
Sbjct: 9 LCIYGAAHLEQPQISSTKTLSKTARLECVVYGVKISETSIYWYRERPGEAIQLLVYISSD 188
Query: 72 YNQRPLGG-KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW--MSDSSGFHKVFAE 128
R G K E + ++STSTL I+ ++K+D AT+YCA W + KVF
Sbjct: 189 GAVRMESGITSGKFEVDRVPETSTSTLTIHNVEKKDIATHYCAFWEKTQEFGKKIKVFGP 368
Query: 129 GTKLIV 134
GTKLI+
Sbjct: 369 GTKLII 386
>gb|AF378741.1|AF378741 Aotus nancymaae clone S1-7 T-cell receptor gamma chain V-J region
mRNA, partial cds
Length = 364
Score = 82.8 bits (203), Expect = 3e-14
Identities = 44/117 (37%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
Frame = +1
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGG 79
LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++ R G
Sbjct: 10 LEQPQISSTKTLSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSDGAVRMESG 189
Query: 80 -KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIV 134
K E + ++STSTL I+ ++K+D ATYYCA W G KVF GTKLI+
Sbjct: 190 ITSGKFEVDRVPETSTSTLTIHNVEKKDIATYYCAFWEPQEFGKKIKVFGPGTKLII 360
>emb|Z11403.1|HSN1B13B H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 216
Score = 82.8 bits (203), Expect = 3e-14
Identities = 41/69 (59%), Positives = 55/69 (79%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W ++ KVF GTKLI+ +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEAELGKKIKVFGPGTKLII--TDKQLDADVSPKPT 185
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 186 IFLPSIAET 212
>gb|AF378743.1|AF378743 Aotus nancymaae clone Y9-5 T-cell receptor gamma chain V-J region
mRNA, partial cds
Length = 364
Score = 82.4 bits (202), Expect = 4e-14
Identities = 44/117 (37%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Frame = +1
Query: 20 LEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGG 79
LEQ ++S T+ + ++ C+VY S T+I+WYR++ + + L+Y++++ R G
Sbjct: 10 LEQPQISSTKTLSKTARLECVVYGAKISETSIYWYRERPGEAIQLLVYISSDGAVRMESG 189
Query: 80 -KHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW-MSDSSGFHKVFAEGTKLIV 134
K E + ++STSTL I+ ++K+D ATYYCA W M + KVF GTKLI+
Sbjct: 190 ITSGKFEVDRVPETSTSTLTIHNVEKKDIATYYCAFWEMREFGKKIKVFGPGTKLII 360
>emb|Z11361.1|HSS2TB6 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 82.4 bits (202), Expect = 4e-14
Identities = 43/70 (61%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W D G KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEVDGLGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
>emb|Z11302.1|HSS1B28 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 82.4 bits (202), Expect = 4e-14
Identities = 43/70 (61%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W S G KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWESQELGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
>emb|Z11374.1|HSS3B43 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 216
Score = 82.4 bits (202), Expect = 4e-14
Identities = 41/69 (59%), Positives = 54/69 (77%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W + KVF GTKLI+ +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEQELGKKIKVFGPGTKLII--TDKQLDADVSPKPT 185
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 186 IFLPSIAET 212
>emb|Z11310.1|HSS1PHA10 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 216
Score = 82.4 bits (202), Expect = 4e-14
Identities = 41/69 (59%), Positives = 54/69 (77%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W + KVF GTKLI+ +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEGELGKKIKVFGPGTKLII--TDKQLDADVSPKPT 185
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 186 IFLPSIAET 212
>emb|Z11300.1|HSS1B26 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 216
Score = 82.4 bits (202), Expect = 4e-14
Identities = 41/69 (59%), Positives = 54/69 (77%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W + KVF GTKLI+ +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEKELGKKIKVFGPGTKLII--TDKQLDADVSPKPT 185
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 186 IFLPSIAET 212
>emb|Z11198.1|HSN1TB12 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 216
Score = 82.4 bits (202), Expect = 4e-14
Identities = 41/69 (59%), Positives = 54/69 (77%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W + KVF GTKLI+ +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEKELGKKIKVFGPGTKLII--TDKQLDADVSPKPT 185
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 186 IFLPSIAET 212
>emb|Z11178.1|HSN1B19 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 216
Score = 82.4 bits (202), Expect = 4e-14
Identities = 41/69 (59%), Positives = 54/69 (77%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W + KVF GTKLI+ +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEKELGKKIKVFGPGTKLII--TDKQLDADVSPKPT 185
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 186 IFLPSIAET 212
>emb|Z11176.1|HSN1B17 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 216
Score = 82.4 bits (202), Expect = 4e-14
Identities = 41/69 (59%), Positives = 54/69 (77%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W + KVF GTKLI+ +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEQELGKKIKVFGPGTKLII--TDKQLDADVSPKPT 185
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 186 IFLPSIAET 212
>emb|Z11343.1|HSS2B19 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 82.0 bits (201), Expect = 6e-14
Identities = 42/70 (60%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W ++ G KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEAEELGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
>emb|Z11345.1|HSS2B46 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 216
Score = 82.0 bits (201), Expect = 6e-14
Identities = 41/69 (59%), Positives = 54/69 (77%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W + KVF GTKLI+ +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEHELGKKIKVFGPGTKLII--TDKQLDADVSPKPT 185
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 186 IFLPSIAET 212
>emb|Z11170.1|HSN1B10 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 216
Score = 82.0 bits (201), Expect = 6e-14
Identities = 41/69 (59%), Positives = 54/69 (77%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W + KVF GTKLI+ +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWERELGKKIKVFGPGTKLII--TDKQLDADVSPKPT 185
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 186 IFLPSIAET 212
>dbj|D01059.1|HUMIGLYM1 Homo sapiens mRNA for immunoglobulin lambda light chain, complete
cds
Length = 881
Score = 81.6 bits (200), Expect = 7e-14
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 6/188 (3%)
Frame = +2
Query: 51 IHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATY 110
I+WY+QK ++L+ ++ + + G + SKD ++ L I+ L+ EDEA Y
Sbjct: 182 IYWYQQKPGSPPQFLLRYKSDSDNQQGSGVPSRFSGSKDASANAGILLISGLQSEDEADY 361
Query: 111 YCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCL 170
YC W G VF GTKL V+ K +P T+F PS E +K T +CL
Sbjct: 362 YCMIW----RGTAVVFGGGTKLTVLGQPK-----AAPSVTLFPPSSEELQANK-ATLVCL 511
Query: 171 LEKFFPDVIRVYWKEKNG------NTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHS 224
+ F+P + V WK + T S++ + +Y+ LT + + +S
Sbjct: 512 ISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLS---LTPEQWKSHRSYS 682
Query: 225 CIVKHENN 232
C V HE +
Sbjct: 683 CQVTHEGS 706
>emb|Z11235.1|HSN2TB6 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 81.6 bits (200), Expect = 7e-14
Identities = 43/70 (61%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W SG KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEVRESGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
>emb|Z11180.1|HSN1B21 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 81.6 bits (200), Expect = 7e-14
Identities = 42/70 (60%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W + G KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEGEELGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
>emb|X14583.1|HSIGLV Human mRNA for Ig lambda-chain
Length = 870
Score = 81.6 bits (200), Expect = 7e-14
Identities = 66/213 (30%), Positives = 96/213 (44%), Gaps = 6/213 (2%)
Frame = +1
Query: 26 SVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIE 85
SV+ + V ISC N + WY+Q + LIY + N+RP G +
Sbjct: 106 SVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIY---DNNKRP-SGIPDRFS 273
Query: 86 ASKDFKSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADI 145
SK +++TL I L+ DEA YYC W DSS VF GTKL V+ K
Sbjct: 274 GSKS--GTSATLGITGLQTGDEADYYCGTW--DSSLSAGVFGGGTKLTVLGQPK-----A 426
Query: 146 SPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDVIRVYWKEKNG------NTILDSQEGDT 199
+P T+F PS E +K T +CL+ F+P + V WK + T S++ +
Sbjct: 427 APSVTLFPPSSEELQANK-ATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNN 603
Query: 200 LKTKGTYMKFSWLTVPERAMGKEHSCIVKHENN 232
+Y+ LT + + +SC V HE +
Sbjct: 604 KYAASSYLS---LTPEQWKSHRSYSCQVTHEGS 693
>emb|Z11273.1|HSN3TB10 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 216
Score = 81.6 bits (200), Expect = 7e-14
Identities = 41/69 (59%), Positives = 54/69 (77%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W + KVF GTKLI+ +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEVELGKKIKVFGPGTKLII--TDKQLDADVSPKPT 185
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 186 IFLPSIAET 212
>emb|Z11209.1|HSN2B14 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 216
Score = 81.6 bits (200), Expect = 7e-14
Identities = 41/69 (59%), Positives = 54/69 (77%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W + KVF GTKLI+ +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEVELGKKIKVFGPGTKLII--TDKQLDADVSPKPT 185
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 186 IFLPSIAET 212
>emb|Z11206.1|HSN2B11 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 216
Score = 81.6 bits (200), Expect = 7e-14
Identities = 41/69 (59%), Positives = 54/69 (77%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W + KVF GTKLI+ +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEVELGKKIKVFGPGTKLII--TDKQLDADVSPKPT 185
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 186 IFLPSIAET 212
>emb|Z11314.1|HSS1PHA14 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 222
Score = 81.6 bits (200), Expect = 7e-14
Identities = 43/71 (60%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADW--MSDSSGFHKVFAEGTKLIVIPSDKRLDADISPK 148
++ST+TL I+ ++K+D ATYYCA W MS+ KVF GTKLI+ +DK+LDAD+SPK
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEVMSELGKKIKVFGPGTKLII--TDKQLDADVSPK 185
Query: 149 PTIFLPSVAET 159
PTIFLPS+AET
Sbjct: 186 PTIFLPSIAET 218
>emb|AJ133189.1|ARU133189 Acipenser ruthenus mRNA for immunoglobulin light chain, clone ArL1B
Length = 1038
Score = 81.3 bits (199), Expect = 1e-13
Identities = 67/235 (28%), Positives = 101/235 (42%), Gaps = 11/235 (4%)
Frame = +1
Query: 7 FTSCCLWVFGLGQLEQTELSVTRQTD--------ENVQISCIVYLPYFSNTAIHWYRQKT 58
F S +W + E + QT + V ++C V NT +HWY+QK
Sbjct: 34 FISIFIWALVICTQESSGQYTVTQTPAEKSVLPGDTVALNCKVNSAVLGNTYLHWYQQKP 213
Query: 59 NQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMSD 118
+ + LIY A+ + + + + DF TL I+ ++ EDE YYC
Sbjct: 214 GEAPKLLIYRASTL-ESGIPTRFSGSGSGTDF-----TLTISGVQAEDEGDYYCVSVHYS 375
Query: 119 SSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPDV 178
SS + F GTKLIV + +S P PS E + T +CL+ F+PDV
Sbjct: 376 SSRYVLTFGPGTKLIVKSGSPTAPSSVSLLP----PSKLELDSKGKATLVCLVNNFYPDV 543
Query: 179 IRVYWKEKNGNTILDSQEGDTLKTK-GTYMKFSWLTVPERAMGKE--HSCIVKHE 230
+ + W +G T+K K G Y S LT+ + + ++C VKHE
Sbjct: 544 VDIKW-TVDGVAQSSGVLTSTMKQKDGKYSASSSLTLTKAVWNSKETYTCTVKHE 705
>emb|Z11398.1|HSS3TB22 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 213
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/69 (57%), Positives = 54/69 (77%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W G+ K+F GT L+V +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALW-DQKRGYKKLFGSGTTLVV--TDKQLDADVSPKPT 182
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 183 IFLPSIAET 209
>gb|BC022823.1| Homo sapiens, clone MGC:39283 IMAGE:4856249, mRNA, complete cds
Length = 895
Score = 81.3 bits (199), Expect = 1e-13
Identities = 61/187 (32%), Positives = 90/187 (47%), Gaps = 6/187 (3%)
Frame = +2
Query: 52 HWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYY 111
+WY+QK Q +IY N+RP G + +S +T TL I+ ++ EDEA YY
Sbjct: 191 YWYQQKPGQAPVLVIY---KDNERPSGIPERFSGSSS---GTTVTLTISGVQAEDEADYY 352
Query: 112 CADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLL 171
C +DSSG + VF GTKL V+ K +P T+F PS E +K T +CL+
Sbjct: 353 CQS--ADSSGTYWVFGGGTKLTVLGQPK-----AAPSVTLFPPSSEELQANK-ATLVCLI 508
Query: 172 EKFFPDVIRVYWKEKNG------NTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSC 225
F+P + V WK + T S++ + +Y+ LT + K +SC
Sbjct: 509 SDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLS---LTPEQWKSHKSYSC 679
Query: 226 IVKHENN 232
V HE +
Sbjct: 680 QVTHEGS 700
>emb|X57810.1|HSIGVL011 Human rearranged immunoglobulin lambda light chain mRNA
Length = 780
Score = 81.3 bits (199), Expect = 1e-13
Identities = 63/189 (33%), Positives = 90/189 (47%), Gaps = 8/189 (4%)
Frame = +1
Query: 52 HWYRQKTNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSS--TSTLEINYLKKEDEAT 109
+WY+QK+ Q +IY T +RP G I F SS STL I+ + EDEA
Sbjct: 133 YWYQQKSGQSPVLVIYEDT---KRPSG-----IPERFSFSSSGTMSTLTISGAQVEDEAD 288
Query: 110 YYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLC 169
YYC + +D G H+VF GTKL V+ K +P T+F PS E +K T +C
Sbjct: 289 YYC--YSTDRRGNHRVFGGGTKLTVLGQPKA-----APSVTLFPPSSEELQANKA-TLVC 444
Query: 170 LLEKFFPDVIRVYWKEKNG------NTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEH 223
L+ F+P + V WK + T S++ + +Y+ LT + K +
Sbjct: 445 LISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLS---LTPEQWKSHKSY 615
Query: 224 SCIVKHENN 232
SC V HE +
Sbjct: 616 SCQVTHEGS 642
>emb|Z11385.1|HSS3PHA3 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W G KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEEQEPGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
>emb|Z11363.1|HSS2TB8 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/70 (60%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W + G KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEAQELGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
>emb|Z11339.1|HSS2B15 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/70 (60%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W + G KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWDDEELGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
>emb|Z11190.1|HSN1B31 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/70 (60%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W + G KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEAQELGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
>emb|Z11182.1|HSN1B23 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W G KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWAEQELGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
>emb|X86722.1|PPATRGV10 P.pygmaeus ssp. alelei TRGV10 gene
Length = 514
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = +1
Query: 16 GLGQLEQTELSVTRQTDENVQISCIVYLPYFSNTAIHWYRQKTNQQFEYLIYVAT--NYN 73
GL ++EQ +LS++ + +++ I C + F IHWY QK NQ E+LIY+A+ +
Sbjct: 163 GLSKVEQFQLSISTEVKKSIDIPCKISSTKFETDVIHWYWQKPNQALEHLIYIASTKSAT 342
Query: 74 QRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADW 115
+ G K+EA K+ ++ TS L I ++KED A YYCA W
Sbjct: 343 RGSTGKMGNKVEARKNSQTLTSILTIKSIEKEDMAVYYCAAW 468
>emb|Z11293.1|HSS1B19 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 216
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/69 (57%), Positives = 54/69 (77%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W S + K+F GT L+V +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEVIPSYYKKLFGSGTTLVV--TDKQLDADVSPKPT 185
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 186 IFLPSIAET 212
>emb|X57819.1|HSIGVL029 Human rearranged immunoglobulin lambda light chain mRNA
Length = 819
Score = 80.9 bits (198), Expect = 1e-13
Identities = 71/241 (29%), Positives = 106/241 (43%), Gaps = 10/241 (4%)
Frame = +2
Query: 2 LLLRWFTSCCLWVFGLGQLEQTEL----SVTRQTDENVQISCIVYLPYFSNTAIHWYRQK 57
LLL T C G Q+ L S + + V ISC ++WY+Q
Sbjct: 14 LLLTLLTHCA------GSWAQSVLTQPPSASGTPGQRVIISCSGSSSNIGGNTVNWYQQL 175
Query: 58 TNQQFEYLIYVATNYNQRPLGGKHKKIEASKDFKSSTSTLEINYLKKEDEATYYCADWMS 117
+ + LI+ + NQRP G + SK ++++L I+ L+ EDEA YYCA W
Sbjct: 176 PGRAPKLLIH---SNNQRP-SGVPDRFSGSKS--GTSASLAISGLQSEDEADYYCAAW-D 334
Query: 118 DSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEKFFPD 177
DS VF GTK+ V+ K +P T+F PS E +K T +CL+ F+P
Sbjct: 335 DSLNGRYVFGTGTKVTVLGQPK-----ANPTVTLFPPSSEELQANK-ATLVCLISDFYPG 496
Query: 178 VIRVYWKEKNG------NTILDSQEGDTLKTKGTYMKFSWLTVPERAMGKEHSCIVKHEN 231
+ V WK T S++ + +Y+ LT + + +SC V HE
Sbjct: 497 AVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLS---LTPEQWKSHRSYSCQVTHEG 667
Query: 232 N 232
+
Sbjct: 668 S 670
>emb|Z11372.1|HSS3B41 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 80.9 bits (198), Expect = 1e-13
Identities = 42/70 (60%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W + G KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEVEELGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
>emb|Z11349.1|HSS2TB10 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 80.9 bits (198), Expect = 1e-13
Identities = 42/70 (60%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W + G KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEATELGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
>emb|Z11333.1|HSS1TB20 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 80.9 bits (198), Expect = 1e-13
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W G KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEEQELGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
>emb|Z11294.1|HSS1B20 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 80.9 bits (198), Expect = 1e-13
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W G KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEGQELGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
>emb|Z11285.1|HSS1B10 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 80.9 bits (198), Expect = 1e-13
Identities = 42/70 (60%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W + G KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWDTQELGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
>emb|Z11275.1|HSN3TB12 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 80.9 bits (198), Expect = 1e-13
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W G KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEQQELGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
>emb|Z11269.1|HSN3PHA7 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 210
Score = 80.9 bits (198), Expect = 1e-13
Identities = 40/69 (57%), Positives = 55/69 (78%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFHKVFAEGTKLIVIPSDKRLDADISPKPT 150
++ST+TL I+ ++K+D ATYYCA W + G+ K+F GT L+V +DK+LDAD+SPKPT
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALW--EVRGYKKLFGSGTTLVV--TDKQLDADVSPKPT 179
Query: 151 IFLPSVAET 159
IFLPS+AET
Sbjct: 180 IFLPSIAET 206
>emb|Z11252.1|HSN3B8 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 80.9 bits (198), Expect = 1e-13
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W G KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEDQELGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
>emb|Z11221.1|HSN2B9 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 80.9 bits (198), Expect = 1e-13
Identities = 42/70 (60%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W + G KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEAKELGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
>emb|Z11192.1|HSN1B4 H.sapiens gamma-delta T-cell Vgamma9+ mRNA
Length = 219
Score = 80.9 bits (198), Expect = 1e-13
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = +3
Query: 91 KSSTSTLEINYLKKEDEATYYCADWMSDSSGFH-KVFAEGTKLIVIPSDKRLDADISPKP 149
++ST+TL I+ ++K+D ATYYCA W G KVF GTKLI+ +DK+LDAD+SPKP
Sbjct: 12 ETSTTTLTIHNVEKQDIATYYCALWEEQELGKKIKVFGPGTKLII--TDKQLDADVSPKP 185
Query: 150 TIFLPSVAET 159
TIFLPS+AET
Sbjct: 186 TIFLPSIAET 215
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 19, 2002 12:00 AM
Number of letters in database: 587,334,133
Number of sequences in database: 1,164,257
Lambda K H
0.320 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,862,227,625
Number of Sequences: 1164257
Number of extensions: 27861464
Number of successful extensions: 213480
Number of sequences better than 10.0: 22800
Number of HSP's better than 10.0 without gapping: 91917
Number of HSP's successfully gapped in prelim test: 7217
Number of HSP's that attempted gapping in prelim test: 65452
Number of HSP's gapped (non-prelim): 166320
length of query: 304
length of database: 1,627,433,809
effective HSP length: 134
effective length of query: 170
effective length of database: 1,471,423,371
effective search space: 250141973070
effective search space used: 250141973070
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)