TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(557 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,164,257 sequences; 587,334,133 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_011179.1| Mus musculus prosaposin (Psap), mRNA 1075 0.0
gb|S36200.1|S36200 saposin=sphingolipid activator protein [... 1068 0.0
gb|S71616.1|S71616 prosaposin [mice, mRNA, 2593 nt] 1051 0.0
gb|U27340.1|MMU27340 Mus musculus sulfated glycoprotein (Sg... 1038 0.0
ref|NM_013013.1| Rattus norvegicus Prosaposin (sulfated gly... 959 0.0
gb|M19936.1|RATSGP1A Rat sulfated glycoprotein 1 (SGP-1) mR... 959 0.0
gb|S81353.1|S81353 sulfated glycoprotein-1 [rats, testes, m... 953 0.0
gb|S81373.1|S81373 prosaposin=sulfated glycoprotein-1 [rats... 951 0.0
dbj|D00422.1|HUMSA Human sphingolipid activator proteins, m... 732 0.0
gb|M81355.1|HUMSPHINO Homo sapiens sphingolipid activator p... 731 0.0
gb|M60255.1|HUMSAPA1 Human mutant cerebroside sulfate activ... 728 0.0
gb|M60258.1|HUMSAPD1 Human mutant cerebroside sulfate activ... 722 0.0
gb|J03015.1|HUMSAP Homo sapiens sphingolipid activator prot... 721 0.0
ref|XM_045140.2| Homo sapiens prosaposin (variant Gaucher d... 721 0.0
ref|NM_002778.1| Homo sapiens prosaposin (variant Gaucher d... 721 0.0
gb|J03077.1|HUMGLBA Human co-beta glucosidase (proactivator... 721 0.0
gb|BC004275.1|BC004275 Homo sapiens, prosaposin (variant Ga... 721 0.0
gb|M32221.1|HUMSAPABCD Human saposin proteins A-D mRNA, com... 721 0.0
gb|BC001503.1|BC001503 Homo sapiens, prosaposin (variant Ga... 721 0.0
gb|BC007612.1|BC007612 Homo sapiens, prosaposin (variant Ga... 721 0.0
gb|M60257.1|HUMSAPC1 Human mutant cerebroside sulfate activ... 717 0.0
dbj|AB036791.1|AB036791 Bos taurus psap mRNA for prosaposin... 701 0.0
dbj|AK057878.1|AK057878 Homo sapiens cDNA FLJ25149 fis, clo... 633 e-179
gb|AF108656.1|AF108656 Gallus gallus prosaposin mRNA, compl... 559 e-157
dbj|AB003471.1|AB003471 Gallus gallus mRNA for prosaposin, ... 557 e-156
gb|AF276996.1|AF276996 Danio rerio lysosomal cofactor/neuro... 464 e-129
gb|AF108655.1|AF108655 Danio rerio prosaposin precursor, mR... 445 e-123
dbj|AK009408.1|AK009408 Mus musculus adult male tongue cDNA... 239 2e-76
ref|XM_084496.1| Homo sapiens similar to prosaposin (varian... 253 4e-65
gb|S82555.1|S82555 Sulfated glycoprotein-1/SGP-1 [sheep, en... 170 4e-40
gb|U57999.1|MMU57999 Mus musculus prosaposin (psap\SGP-1) g... 152 1e-34
ref|XM_087585.1| Homo sapiens LOC153061 (LOC153061), mRNA 142 9e-32
ref|NM_079858.1| Drosophila melanogaster Saposin-related (S... 139 7e-31
gb|AE003775.1|AE003775 Drosophila melanogaster genomic scaf... 139 7e-31
gb|AF145647.1|AF145647 Drosophila melanogaster clone GH0831... 139 7e-31
gb|AC008219.4|AC008219 Drosophila melanogaster, chromosome ... 139 7e-31
dbj|AB008449.1|AB008449 Bombyx mori mRNA for BmP109, comple... 136 6e-30
gb|AF162129.1|AF162129 Drosophila melanogaster ecdysone dep... 120 5e-25
gb|M86181.1|HUMPSAPA Human prosaposin (PSAP) gene 115 1e-24
emb|X57108.1|HSCSAP11 Human gene for cerebroside sulfate ac... 92 1e-24
gb|BC014989.1|BC014989 Homo sapiens, Similar to phospholipi... 115 1e-23
gb|M12710.1|HUMSHP1A Human sphingolipid activator protein mRNA 114 2e-23
emb|X14778.1|RNSPB Rat mRNA for pulmonary surfactant-associ... 105 2e-20
gb|AF107544.1|AF107544 Ovis aries pulmonary surfactant-asso... 92 2e-16
gb|AF154047.1|AF154047 Naegleria fowleri naegleriapore B po... 90 7e-16
gb|AF033190.1|AF033190 Cavia porcellus surfactant protein-B... 87 3e-15
ref|NM_000542.1| Homo sapiens surfactant, pulmonary-associa... 85 2e-14
gb|J02761.1|HUMPSPBA Human pulmonary surfactant-associated ... 85 2e-14
ref|XM_034120.2| Homo sapiens surfactant, pulmonary-associa... 85 2e-14
gb|U17106.1|OCU17106 Oryctolagus cuniculus surfactant prote... 84 3e-14
gb|M15170.1|DOGSP18A Dog pulmonary surfactant protein 18 (S... 82 1e-13
gb|U66367.1|DDU66367 Dictyostelium discoideum SapA (sapA) m... 79 2e-12
gb|AF196309.1|AF196309 Naegleria fowleri naegleriapore B pr... 76 1e-11
emb|X57107.1|HSCSAP3 Human gene for cerebroside sulfate act... 72 2e-10
gb|M24901.1|RABSPBA Rabbit pulmonary surfactant-associated ... 70 4e-10
dbj|D17028.1|HUMD3C07M5 Human HepG2 partial cDNA, clone hmd... 67 3e-09
gb|AF154046.1|AF154046 Naegleria fowleri naegleriapore A po... 64 5e-08
gb|AC073370.6| Homo sapiens chromosome 10 clone RP11-472G21... 62 2e-07
ref|NM_120258.1| Arabidopsis thaliana chromosome 5 CHR5v12... 54 3e-05
gb|AY056420.1| Arabidopsis thaliana AT5g01800/T20L15_70 mRN... 54 3e-05
dbj|D12777.1|RICASPPRO Rice mRNA for aspartic proteinase, c... 51 3e-04
ref|NM_069043.1| Caenorhabditis elegans 51 3e-04
ref|NM_115032.1| Arabidopsis thaliana chromosome 3 CHR3v12... 51 3e-04
dbj|AB002695.1|AB002695 Pumpkin mRNA for aspartic endopepti... 50 8e-04
gb|AF220198.1|AF220198 Vitis riparia putative protein mRNA,... 49 0.001
dbj|AB024999.1|AB024999 Cicer arietinum mRNA for aspartic p... 49 0.002
gb|U40853.1|OCU40853 Oryctolagus cuniculus pulmonary surfac... 48 0.002
gb|S78114.1|S78114 surfactant protein B [mice, DBA/2J, live... 46 0.011
gb|AF076282.1|AF076282 Mustela vison clone SP-B/Short simil... 46 0.011
dbj|AB021787.1|AB021787 Pyrus pyrifolia PPFRU11 mRNA for as... 46 0.011
dbj|AB070857.1|AB070857 Glycine max sapa mRNA for aspartic ... 45 0.014
emb|X56136.1|HVASPROT Barley mRNA for aspartic proteinase 45 0.024
gb|AC012454.8| Homo sapiens BAC clone RP11-439L14 from 2, c... 44 0.032
gb|AF400074.1|AF400074 Homo sapiens surfactant, pulmonary-a... 44 0.032
gb|M24461.1|HUMSPBAA Human pulmonary surfactant-associated ... 44 0.032
gb|L38775.1|PS30007E Pisolithus tinctorius (F00041) mRNA, E... 44 0.041
gb|AY056387.1| Arabidopsis thaliana At1g11910/F12F1_24 mRNA... 44 0.054
gb|AY056403.1| Arabidopsis thaliana At1g11910/F12F1_24 mRNA... 44 0.054
gb|U51036.1|ATU51036 Arabidopsis thaliana aspartic proteina... 44 0.054
gb|AY063974.1| Arabidopsis thaliana putative aspartic prote... 44 0.054
ref|NM_101062.1| Arabidopsis thaliana chromosome 1 CHR1v12... 44 0.054
gb|AC006714.3| Caenorhabditis elegans cosmid Y119D3B, compl... 43 0.092
ref|NM_069046.1| Caenorhabditis elegans 43 0.092
gb|AF196308.1|AF196308 Naegleria fowleri naegleriapore A pr... 41 0.35
emb|X77260.1|BOASPR B. oleracea L. gene for aspartic protea... 41 0.35
gb|AF362767.1|AF362767 Paragonimus westermani clone NJS459 ... 40 0.46
emb|Y09123.1|CCY09123 C.calcitrapa mRNA for aspartic protei... 40 0.60
emb|X69193.1|VCCYNA V.cardunculus mRNA for cynarase 40 0.60
dbj|AB025359.2|AB025359 Helianthus annuus mRNA for aspartic... 39 1.3
gb|AF211857.1|AF211857 Ovis aries pulmonary surfactant prot... 39 1.7
gb|M60259.1|HUMSAPE1 Human mutant cerebroside sulfate activ... 39 1.7
dbj|AB045891.1|AB045891 Nepenthes alata NaAP1 mRNA for aspa... 38 2.3
dbj|AB069959.1|AB069959 Glycine max sapd mRNA for aspartic ... 38 2.3
gb|AF175577.1|AF175577 Tripedalia cystophora J3-crystallin ... 38 2.3
ref|NM_077493.1| sphingomyelin phosphodiesterase 37 3.9
dbj|AB016728.1|AB016728 Dictyostelium discoideum sapA mRNA ... 36 8.6
>ref|NM_011179.1| Mus musculus prosaposin (Psap), mRNA
Length = 1961
Score = 1075 bits (2779), Expect = 0.0
Identities = 523/557 (93%), Positives = 523/557 (93%)
Frame = +2
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS
Sbjct: 26 MYALALFASLLATALTSPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 205
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM
Sbjct: 206 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 385
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYP 180
IKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYP
Sbjct: 386 IKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYP 565
Query: 181 QDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIC 240
QDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIC
Sbjct: 566 QDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIC 745
Query: 241 KNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM 300
KNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM
Sbjct: 746 KNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM 925
Query: 301 MDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQ 360
MDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQ
Sbjct: 926 MDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQ 1105
Query: 361 EVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXXX 420
EVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALL
Sbjct: 1106EVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLKEPTPPKQ 1285
Query: 421 XXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPY 480
HVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPY
Sbjct: 1286PAQPKQSALPAHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPY 1465
Query: 481 QKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNME 540
QKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNME
Sbjct: 1466QKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNME 1645
Query: 541 TAARCNAVDHCKRHVWN 557
TAARCNAVDHCKRHVWN
Sbjct: 1646TAARCNAVDHCKRHVWN 1696
>gb|S36200.1|S36200 saposin=sphingolipid activator protein [mice, liver, mRNA, 2567 nt]
Length = 2567
Score = 1068 bits (2762), Expect = 0.0
Identities = 520/557 (93%), Positives = 521/557 (93%)
Frame = +3
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS
Sbjct: 6 MYALALFASLLATALTSPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 185
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM
Sbjct: 186 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 365
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYP 180
IKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYP
Sbjct: 366 IKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYP 545
Query: 181 QDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIC 240
QDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIC
Sbjct: 546 QDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIC 725
Query: 241 KNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM 300
KNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM
Sbjct: 726 KNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM 905
Query: 301 MDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQ 360
MDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNAC +LPDPARTKCQ
Sbjct: 906 MDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACGVLPDPARTKCQ 1085
Query: 361 EVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXXX 420
EVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALL
Sbjct: 1086EVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLKEPTPPKQ 1265
Query: 421 XXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPY 480
HVPPQKNGGFCEVCKK VLYLEHNLEKNSTKEEILAALEKGCSFLPDPY
Sbjct: 1266PAQPKQSALPAHVPPQKNGGFCEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDPY 1445
Query: 481 QKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNME 540
QKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNME
Sbjct: 1446QKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNME 1625
Query: 541 TAARCNAVDHCKRHVWN 557
TAARCNAVDHCKRHVWN
Sbjct: 1626TAARCNAVDHCKRHVWN 1676
>gb|S71616.1|S71616 prosaposin [mice, mRNA, 2593 nt]
Length = 2593
Score = 1051 bits (2719), Expect = 0.0
Identities = 514/557 (92%), Positives = 517/557 (92%)
Frame = +1
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS
Sbjct: 49 MYALALFASLLATALTSPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 228
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICKTVVTEAGNLLKDNAT+EEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM
Sbjct: 229 LPCDICKTVVTEAGNLLKDNATEEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 408
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYP 180
IKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIP VDMARVVAPFMSNIPLLLYP
Sbjct: 409 IKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIP-VDMARVVAPFMSNIPLLLYP 585
Query: 181 QDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIC 240
QDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIC
Sbjct: 586 QDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIC 765
Query: 241 KNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM 300
KNY+DQYSEVCVQM MHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM
Sbjct: 766 KNYLDQYSEVCVQMWMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM 945
Query: 301 MDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQ 360
MDPYEQ+LVQAHNVILCQTCQ VMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQ
Sbjct: 946 MDPYEQDLVQAHNVILCQTCQLVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQ 1125
Query: 361 EVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXXX 420
EVVGTFGPS LDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAP IVSALL
Sbjct: 1126EVVGTFGPSQLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPRIVSALLKEPTPPKQ 1305
Query: 421 XXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPY 480
HVPPQKNGGFCEVCKK VLYLEHNLEKNSTKEEILAALEKGCSFLPDPY
Sbjct: 1306PAQPKQSALRAHVPPQKNGGFCEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDPY 1485
Query: 481 QKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNME 540
QKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNME
Sbjct: 1486QKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNME 1665
Query: 541 TAARCNAVDHCKRHVWN 557
TAARCNAVDHCKRHVWN
Sbjct: 1666TAARCNAVDHCKRHVWN 1716
>gb|U27340.1|MMU27340 Mus musculus sulfated glycoprotein (Sgp1) mRNA, complete cds
Length = 2558
Score = 1038 bits (2684), Expect = 0.0
Identities = 509/557 (91%), Positives = 512/557 (91%)
Frame = +3
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS
Sbjct: 30 MYALALFASLLATALTSPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 209
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM
Sbjct: 210 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 389
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYP 180
IKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNK+PEVDMARVVAPF +NIPLLLYP
Sbjct: 390 IKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKVPEVDMARVVAPFSANIPLLLYP 569
Query: 181 QDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIC 240
QDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIC
Sbjct: 570 QDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIC 749
Query: 241 KNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM 300
KNYVDQYSEVCVQ+LMHM QPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM
Sbjct: 750 KNYVDQYSEVCVQILMHM---QPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM 920
Query: 301 MDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQ 360
MDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQ
Sbjct: 921 MDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQ 1100
Query: 361 EVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXXX 420
EVVGTF PSLLD FIHEVNPSSLCGVIGLC A PELVEALEQPAP IVSALL
Sbjct: 1101EVVGTFDPSLLDDFIHEVNPSSLCGVIGLCTALPELVEALEQPAPRIVSALLKEPTPPKQ 1280
Query: 421 XXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPY 480
HVPPQKNGGFCEV KK VLYLEHNLEKNSTKEEILAALEKGCSFLPDPY
Sbjct: 1281PAQPKQSALPAHVPPQKNGGFCEVFKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDPY 1460
Query: 481 QKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNME 540
QKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNME
Sbjct: 1461QKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNME 1640
Query: 541 TAARCNAVDHCKRHVWN 557
TAARCNAVDHCKRHVWN
Sbjct: 1641TAARCNAVDHCKRHVWN 1691
>ref|NM_013013.1| Rattus norvegicus Prosaposin (sulfated glycoprotein, sphingolipid
hydrolase activator) (Psap), mRNA
Length = 2175
Score = 959 bits (2478), Expect = 0.0
Identities = 462/557 (82%), Positives = 488/557 (86%)
Frame = +1
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PVQDPK CSGGSAV+CRDVKTAVDC AVKHCQQMVWSKPTAKS
Sbjct: 28 MYALALLASLLVTALTSPVQDPKICSGGSAVVCRDVKTAVDCRAVKHCQQMVWSKPTAKS 207
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICKTVVTEAGNLLKDNAT+EEILHYLEKTC WIHDSSLSASCKEVVDSYLPVILDM
Sbjct: 208 LPCDICKTVVTEAGNLLKDNATEEEILHYLEKTCAWIHDSSLSASCKEVVDSYLPVILDM 387
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYP 180
IKGEMSNPGEVCSALNLCQSLQEYLAEQNQ+QLESNKIPEVD+ARVVAPFMSNIPLLLYP
Sbjct: 388 IKGEMSNPGEVCSALNLCQSLQEYLAEQNQRQLESNKIPEVDLARVVAPFMSNIPLLLYP 567
Query: 181 QDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIC 240
QD PRSQPQPKANEDVCQDCMKLV+D+QTAV+TNSSF+QG VDHVKEDCDRLGPGVSDIC
Sbjct: 568 QDRPRSQPQPKANEDVCQDCMKLVTDIQTAVRTNSSFVQGLVDHVKEDCDRLGPGVSDIC 747
Query: 241 KNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM 300
KNYVDQYSEV VQM+MHM QPKEICV+ GFC+EVKRVPM+TLVPATE IKNILPALE+
Sbjct: 748 KNYVDQYSEVAVQMMMHM---QPKEICVMVGFCDEVKRVPMRTLVPATEAIKNILPALEL 918
Query: 301 MDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQ 360
DPYEQ+++QA NVI CQ CQ VM K SELI+NNATEELL+KGLS AC+LLP PA TKCQ
Sbjct: 919 TDPYEQDVIQAQNVIFCQVCQLVMRKLSELIINNATEELLIKGLSKACSLLPAPASTKCQ 1098
Query: 361 EVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXXX 420
EV+ TFGPSLLD+ +HEVNP+ LCGVI LC+A P LV LEQPA AIVSAL
Sbjct: 1099EVLVTFGPSLLDVLMHEVNPNFLCGVISLCSANPNLVGTLEQPAAAIVSALPKEPAPPKQ 1278
Query: 421 XXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPY 480
HVPPQKNGGFCEVCKK V+YLEHNLEKNSTKEEILAALEKGCSFLPDPY
Sbjct: 1279PEEPKQSALRAHVPPQKNGGFCEVCKKLVIYLEHNLEKNSTKEEILAALEKGCSFLPDPY 1458
Query: 481 QKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNME 540
QKQCD+FVAEYEPLLLEILVEVMDP FVCSKIGVCPSAYKLLLGTEKCVWGP YWCQN E
Sbjct: 1459QKQCDEFVAEYEPLLLEILVEVMDPSFVCSKIGVCPSAYKLLLGTEKCVWGPGYWCQNSE 1638
Query: 541 TAARCNAVDHCKRHVWN 557
TAARCNAVDHCKRHVWN
Sbjct: 1639TAARCNAVDHCKRHVWN 1689
>gb|M19936.1|RATSGP1A Rat sulfated glycoprotein 1 (SGP-1) mRNA, complete cds
Length = 2175
Score = 959 bits (2478), Expect = 0.0
Identities = 462/557 (82%), Positives = 488/557 (86%)
Frame = +1
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PVQDPK CSGGSAV+CRDVKTAVDC AVKHCQQMVWSKPTAKS
Sbjct: 28 MYALALLASLLVTALTSPVQDPKICSGGSAVVCRDVKTAVDCRAVKHCQQMVWSKPTAKS 207
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICKTVVTEAGNLLKDNAT+EEILHYLEKTC WIHDSSLSASCKEVVDSYLPVILDM
Sbjct: 208 LPCDICKTVVTEAGNLLKDNATEEEILHYLEKTCAWIHDSSLSASCKEVVDSYLPVILDM 387
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYP 180
IKGEMSNPGEVCSALNLCQSLQEYLAEQNQ+QLESNKIPEVD+ARVVAPFMSNIPLLLYP
Sbjct: 388 IKGEMSNPGEVCSALNLCQSLQEYLAEQNQRQLESNKIPEVDLARVVAPFMSNIPLLLYP 567
Query: 181 QDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIC 240
QD PRSQPQPKANEDVCQDCMKLV+D+QTAV+TNSSF+QG VDHVKEDCDRLGPGVSDIC
Sbjct: 568 QDRPRSQPQPKANEDVCQDCMKLVTDIQTAVRTNSSFVQGLVDHVKEDCDRLGPGVSDIC 747
Query: 241 KNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM 300
KNYVDQYSEV VQM+MHM QPKEICV+ GFC+EVKRVPM+TLVPATE IKNILPALE+
Sbjct: 748 KNYVDQYSEVAVQMMMHM---QPKEICVMVGFCDEVKRVPMRTLVPATEAIKNILPALEL 918
Query: 301 MDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQ 360
DPYEQ+++QA NVI CQ CQ VM K SELI+NNATEELL+KGLS AC+LLP PA TKCQ
Sbjct: 919 TDPYEQDVIQAQNVIFCQVCQLVMRKLSELIINNATEELLIKGLSKACSLLPAPASTKCQ 1098
Query: 361 EVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXXX 420
EV+ TFGPSLLD+ +HEVNP+ LCGVI LC+A P LV LEQPA AIVSAL
Sbjct: 1099EVLVTFGPSLLDVLMHEVNPNFLCGVISLCSANPNLVGTLEQPAAAIVSALPKEPAPPKQ 1278
Query: 421 XXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPY 480
HVPPQKNGGFCEVCKK V+YLEHNLEKNSTKEEILAALEKGCSFLPDPY
Sbjct: 1279PEEPKQSALRAHVPPQKNGGFCEVCKKLVIYLEHNLEKNSTKEEILAALEKGCSFLPDPY 1458
Query: 481 QKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNME 540
QKQCD+FVAEYEPLLLEILVEVMDP FVCSKIGVCPSAYKLLLGTEKCVWGP YWCQN E
Sbjct: 1459QKQCDEFVAEYEPLLLEILVEVMDPSFVCSKIGVCPSAYKLLLGTEKCVWGPGYWCQNSE 1638
Query: 541 TAARCNAVDHCKRHVWN 557
TAARCNAVDHCKRHVWN
Sbjct: 1639TAARCNAVDHCKRHVWN 1689
>gb|S81353.1|S81353 sulfated glycoprotein-1 [rats, testes, mRNA Partial, 1692 nt]
Length = 1692
Score = 953 bits (2464), Expect = 0.0
Identities = 460/557 (82%), Positives = 487/557 (86%)
Frame = +1
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PVQDPK CSGGSAV+CRDVKTAVDC AVKHCQQMVWSKPTAKS
Sbjct: 28 MYALALLASLLVTALTSPVQDPKICSGGSAVVCRDVKTAVDCRAVKHCQQMVWSKPTAKS 207
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICKTVVTEAGNLLKDNAT+EEILHYLEKTC WIHDSSLSASCKEVVDSYL VILDM
Sbjct: 208 LPCDICKTVVTEAGNLLKDNATEEEILHYLEKTCAWIHDSSLSASCKEVVDSYLLVILDM 387
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYP 180
IKGEMSNPGEVCSALNLCQSLQEYLAEQNQ+QLESNKIPEVD+ARVVAPFMSNIPLLLYP
Sbjct: 388 IKGEMSNPGEVCSALNLCQSLQEYLAEQNQRQLESNKIPEVDLARVVAPFMSNIPLLLYP 567
Query: 181 QDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIC 240
QD PRSQPQPKANEDVCQDCMKLV+D+QTAV+TNSSF+QG VDHVKEDCDRLGPGVSDIC
Sbjct: 568 QDRPRSQPQPKANEDVCQDCMKLVTDIQTAVRTNSSFVQGLVDHVKEDCDRLGPGVSDIC 747
Query: 241 KNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM 300
KNYVDQYSEV VQM+MHM QPKEICV+ GFC+EVKRVPM+TLVPATE IKNILPALE+
Sbjct: 748 KNYVDQYSEVAVQMMMHM---QPKEICVMVGFCDEVKRVPMRTLVPATEAIKNILPALEL 918
Query: 301 MDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQ 360
+PYEQ+++QA NVI CQ CQ VM K SELI+NNATEELL+KGLS AC+LLP PA TKCQ
Sbjct: 919 TEPYEQDVIQAQNVIFCQVCQLVMRKLSELIINNATEELLIKGLSKACSLLPAPASTKCQ 1098
Query: 361 EVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXXX 420
EV+ TFGPSLLD+ +HEVNP+ LCGVI LC+A P LV LEQPA AIVSAL
Sbjct: 1099EVLVTFGPSLLDVLMHEVNPNFLCGVISLCSANPNLVGTLEQPAAAIVSALPKEPAPPKQ 1278
Query: 421 XXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPY 480
HVPPQKNGGFCEVCKK V+YLEHNLEKNSTKEEILAALEKGCSFLPDPY
Sbjct: 1279PEEPKQSALRAHVPPQKNGGFCEVCKKLVIYLEHNLEKNSTKEEILAALEKGCSFLPDPY 1458
Query: 481 QKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNME 540
QKQCD+FVAEYEPLLLEILVEVMDP FVCSKIGVCPSAYKLLLGTEKCVWGP YWCQN E
Sbjct: 1459QKQCDEFVAEYEPLLLEILVEVMDPSFVCSKIGVCPSAYKLLLGTEKCVWGPGYWCQNSE 1638
Query: 541 TAARCNAVDHCKRHVWN 557
TAARCNAVDHCKRHVWN
Sbjct: 1639TAARCNAVDHCKRHVWN 1689
>gb|S81373.1|S81373 prosaposin=sulfated glycoprotein-1 [rats, Stratagene, testicle,
mRNA, 1737 nt]
Length = 1737
Score = 951 bits (2459), Expect = 0.0
Identities = 460/557 (82%), Positives = 487/557 (86%)
Frame = +1
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PVQDPK CSGGSAV+CRDVKTAVDC AVKHCQQMVWSKPTAKS
Sbjct: 25 MYALALLASLLVTALTSPVQDPKICSGGSAVVCRDVKTAVDCRAVKHCQQMVWSKPTAKS 204
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICKTVVTEAGNLLKDNAT+EEILHYLEKTC WIHDSSLSASCKEVVDSYL VILDM
Sbjct: 205 LPCDICKTVVTEAGNLLKDNATEEEILHYLEKTCAWIHDSSLSASCKEVVDSYLLVILDM 384
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYP 180
IKGEMSNPGEVCSALNLCQSLQEYLAEQNQ+QLESNKIPEVD+ARVVAPFMSNIPLLLYP
Sbjct: 385 IKGEMSNPGEVCSALNLCQSLQEYLAEQNQRQLESNKIPEVDLARVVAPFMSNIPLLLYP 564
Query: 181 QDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIC 240
QD PRSQPQPKANEDVCQDCMKLV+D+QTAV+TNSSF+QG VDHVKEDCDRLGPGVSDIC
Sbjct: 565 QDRPRSQPQPKANEDVCQDCMKLVTDIQTAVRTNSSFVQGLVDHVKEDCDRLGPGVSDIC 744
Query: 241 KNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM 300
KNYVDQYSEV VQM+MHM QPKEICV+ GFC+EVKRVPM+TLVPATE IKNILPALE+
Sbjct: 745 KNYVDQYSEVAVQMMMHM---QPKEICVMVGFCDEVKRVPMRTLVPATEAIKNILPALEL 915
Query: 301 MDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQ 360
DPYEQ+++QA NVI CQ CQ VM K SELI+NNATEELL+KGLS AC+LLP PA TKCQ
Sbjct: 916 TDPYEQDVIQAQNVIFCQVCQLVMRKLSELIINNATEELLIKGLSKACSLLPAPASTKCQ 1095
Query: 361 EVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXXX 420
EV+ TFGPSLLD+ +HEVNP+ LCGVI LC+A P LV LEQPA AIVSAL
Sbjct: 1096EVLVTFGPSLLDVLMHEVNPNFLCGVISLCSANPNLVGTLEQPAAAIVSALPKEPAPPKQ 1275
Query: 421 XXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPY 480
HVPPQKNGGFCEVCKK V+YLEHNLEKNSTKEE+LAALEKGCSFLPDPY
Sbjct: 1276PEEPKQSALRAHVPPQKNGGFCEVCKKLVIYLEHNLEKNSTKEEVLAALEKGCSFLPDPY 1455
Query: 481 QKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNME 540
QKQCD+FVAEYEPLLLEILVEVMDP FVCSKIGVCPSAYKLLLGTEKCV GP YWCQNME
Sbjct: 1456QKQCDEFVAEYEPLLLEILVEVMDPSFVCSKIGVCPSAYKLLLGTEKCVRGPGYWCQNME 1635
Query: 541 TAARCNAVDHCKRHVWN 557
TAARCNAVDHCKRHVWN
Sbjct: 1636TAARCNAVDHCKRHVWN 1686
>dbj|D00422.1|HUMSA Human sphingolipid activator proteins, mRNA, complete cds
Length = 2734
Score = 732 bits (1890), Expect = 0.0
Identities = 348/558 (62%), Positives = 426/558 (75%), Gaps = 1/558 (0%)
Frame = +3
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PV K C+ GSAV C++VKTA DCGAVKHC Q VW+KPT KS
Sbjct: 9 MYALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKS 188
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICK VVT AG++LKDNAT+EEIL YLEKTC+W+ ++SASCKE+VDSYLPVILD+
Sbjct: 189 LPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDI 368
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLY 179
IKGEMS PGEVCSALNLC+SLQ++LAE N QKQLESNKIPE+DM VVAPFM+NIPLLLY
Sbjct: 369 IKGEMSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLY 548
Query: 180 PQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDI 239
PQD PRS+PQPK N DVCQDC+++V+D+QTAV+TNS+F+Q V+HVKE+CDRLGPG++DI
Sbjct: 549 PQDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADI 728
Query: 240 CKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE 299
CKNY+ QYSE+ +QM+MHMQDQQPKEIC L GFC+EVK +PM+TLVPA KN++PALE
Sbjct: 729 CKNYISQYSEIAIQMMMHMQDQQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALE 908
Query: 300 MMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKC 359
+++P +++ V A + + C+ C+F++ + ++LI NN TE+ ++ C+ LP +C
Sbjct: 909 LVEPIKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEEC 1088
Query: 360 QEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXX 419
QEVV T+G S+L I + EV+P +C ++ LC+ PA+
Sbjct: 1089QEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR---------LPALT----------- 1208
Query: 420 XXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDP 479
HV K+GGFCEVCKK V YL+ NLEKNSTK+EILAALEKGCSFLPDP
Sbjct: 1209-----------VHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP 1355
Query: 480 YQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNM 539
YQKQCD FVAEYEP+L+EILVEVMDP FVC KIG CPSA+K LLGTEKC+WGPSYWCQN
Sbjct: 1356YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNT 1535
Query: 540 ETAARCNAVDHCKRHVWN 557
ETAA+CNAV+HCKRHVWN
Sbjct: 1536ETAAQCNAVEHCKRHVWN 1589
>gb|M81355.1|HUMSPHINO Homo sapiens sphingolipid activator proteins 1 and 2 processed
mutant mRNA, complete cds
Length = 2734
Score = 731 bits (1887), Expect = 0.0
Identities = 346/541 (63%), Positives = 424/541 (77%), Gaps = 1/541 (0%)
Frame = +3
Query: 18 PVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLL 77
PV K C+ GSAV C++VKTA DCGAVKHC Q VW+KPT KSLPCDICK VVT AG++L
Sbjct: 60 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKSLPCDICKDVVTAAGDML 239
Query: 78 KDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNL 137
KDNAT+EEIL YLEKTC+W+ ++SASCKE+VDSYLPVILD+IKGEMS PGEVCSALNL
Sbjct: 240 KDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNL 419
Query: 138 CQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDV 196
C+SLQ++LAE N QKQLESNKIPE+DM VVAPFM+NIPLLLYPQD PRS+PQPK N DV
Sbjct: 420 CESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDV 599
Query: 197 CQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLM 256
CQDC+++V+D+QTAV+TNS+F+Q V+HVKE+CDRLGPG++DICKNY+ QYSE+ +QM+M
Sbjct: 600 CQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMM 779
Query: 257 HMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVIL 316
HMQDQQPKEIC L GFC+EVK +PM+TLVPA KN++PALE+++P +++ V A + +
Sbjct: 780 HMQDQQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVY 959
Query: 317 CQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIH 376
C+ C+F++ + ++LI NN TE+ ++ C+ LP +CQEVV T+G S+L I +
Sbjct: 960 CEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLE 1139
Query: 377 EVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXXXXXXXXXXXXXXHVPPQ 436
EV+P +C ++ LC+ PA+ HV
Sbjct: 1140EVSPELVCSMLHLCSGTR---------LPALT----------------------VHVTQP 1226
Query: 437 KNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLL 496
K+GGFCEVCKK V YL+ NLEKNSTK+EILAALEKGCSFLPDPYQKQCD FVAEYEP+L+
Sbjct: 1227KDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVAEYEPVLI 1406
Query: 497 EILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHVW 556
EILVEVMDP FVC KIG CPSA+K LLGTEKC+WGPSYWCQN ETAA+CNAV+HCKRHVW
Sbjct: 1407EILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNTETAAQCNAVEHCKRHVW 1586
Query: 557 N 557
N
Sbjct: 1587N 1589
>gb|M60255.1|HUMSAPA1 Human mutant cerebroside sulfate activator protein (SAP-MU-9) mRNA,
complete cds
Length = 2726
Score = 728 bits (1880), Expect = 0.0
Identities = 347/558 (62%), Positives = 425/558 (75%), Gaps = 1/558 (0%)
Frame = +1
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PV K C+ GSAV C++VKTA DCGAVKHC Q VW+KPT KS
Sbjct: 1 MYALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKS 180
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICK VVT AG++LKDNAT+EEIL YLEKTC+W+ ++SASCKE+VDSYLPVILD+
Sbjct: 181 LPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDI 360
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLY 179
IKGEMS PGEVCSALNLC+SLQ++LAE N QKQLESNKIPE+DM VVAPFM+NIPLLLY
Sbjct: 361 IKGEMSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLY 540
Query: 180 PQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDI 239
PQD PRS+PQPK N DVCQDC+++V+D+QTAV+TNS+F+Q V+HVKE+CDRLGPG++DI
Sbjct: 541 PQDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADI 720
Query: 240 CKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE 299
KNY+ QYSE+ +QM+MHMQDQQPKEIC L GFC+EVK +PM+TLVPA KN++PALE
Sbjct: 721 SKNYISQYSEIAIQMMMHMQDQQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALE 900
Query: 300 MMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKC 359
+++P +++ V A + + C+ C+F++ + ++LI NN TE+ ++ C+ LP +C
Sbjct: 901 LVEPIKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEEC 1080
Query: 360 QEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXX 419
QEVV T+G S+L I + EV+P +C ++ LC+ PA+
Sbjct: 1081QEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR---------LPALT----------- 1200
Query: 420 XXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDP 479
HV K+GGFCEVCKK V YL+ NLEKNSTK+EILAALEKGCSFLPDP
Sbjct: 1201-----------VHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP 1347
Query: 480 YQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNM 539
YQKQCD FVAEYEP+L+EILVEVMDP FVC KIG CPSA+K LLGTEKC+WGPSYWCQN
Sbjct: 1348YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNT 1527
Query: 540 ETAARCNAVDHCKRHVWN 557
ETAA+CNAV+HCKRHVWN
Sbjct: 1528ETAAQCNAVEHCKRHVWN 1581
>gb|M60258.1|HUMSAPD1 Human mutant cerebroside sulfate activator protein (SAP-MU-6) mRNA,
complete cds and with a 6 bp insertion
Length = 2723
Score = 722 bits (1863), Expect = 0.0
Identities = 346/558 (62%), Positives = 424/558 (75%), Gaps = 1/558 (0%)
Frame = +1
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PV K C+ GSAV C++VKTA DCGAVKHC Q VW+KPT KS
Sbjct: 1 MYALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKS 180
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICK VVT AG++LKDNAT+EEIL YLEKTC+W+ ++SASCKE+VDSYLPVILD+
Sbjct: 181 LPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDI 360
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLY 179
IKGEMS PGEVCSALNLC+SLQ++LAE N QKQLESNKIPE+DM VVAPFM+NIPLLLY
Sbjct: 361 IKGEMSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLY 540
Query: 180 PQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDI 239
PQD PRS+PQPK N DVCQDC+++V+D+QTAV+TNS+F+Q V+HVKE+CDRLGPG++DI
Sbjct: 541 PQDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADI 720
Query: 240 CKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE 299
KNY+ QYSE+ +QM+MHM DQQPKEIC L GFC+EVK +PM+TLVPA KN++PALE
Sbjct: 721 SKNYISQYSEIAIQMMMHM-DQQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALE 897
Query: 300 MMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKC 359
+++P +++ V A + + C+ C+F++ + ++LI NN TE+ ++ C+ LP +C
Sbjct: 898 LVEPIKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEEC 1077
Query: 360 QEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXX 419
QEVV T+G S+L I + EV+P +C ++ LC+ PA+
Sbjct: 1078QEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR---------LPALT----------- 1197
Query: 420 XXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDP 479
HV K+GGFCEVCKK V YL+ NLEKNSTK+EILAALEKGCSFLPDP
Sbjct: 1198-----------VHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP 1344
Query: 480 YQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNM 539
YQKQCD FVAEYEP+L+EILVEVMDP FVC KIG CPSA+K LLGTEKC+WGPSYWCQN
Sbjct: 1345YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNT 1524
Query: 540 ETAARCNAVDHCKRHVWN 557
ETAA+CNAV+HCKRHVWN
Sbjct: 1525ETAAQCNAVEHCKRHVWN 1578
>gb|J03015.1|HUMSAP Homo sapiens sphingolipid activator protein 1 mRNA, 3' end
Length = 2724
Score = 721 bits (1860), Expect = 0.0
Identities = 345/558 (61%), Positives = 423/558 (74%), Gaps = 1/558 (0%)
Frame = +1
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PV K C+ GSAV C++VKTA DCGAVKHC Q VW+KPT KS
Sbjct: 7 MYALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKS 186
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICK VVT AG++LKDNAT+EEIL YLEKTC+W+ ++SASCKE+VDSYLPVILD+
Sbjct: 187 LPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDI 366
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLY 179
IKGEMS PGEVCSALNLC+SLQ++LAE N QKQLESNKIPE+DM VVAPFM+NIPLLLY
Sbjct: 367 IKGEMSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLY 546
Query: 180 PQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDI 239
PQD PRS+PQPK N DVCQDC+++V+D+QTAV+TNS+F+Q V+HVKE+CDRLGPG++DI
Sbjct: 547 PQDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADI 726
Query: 240 CKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE 299
CKNY+ QYSE+ +QM+MHMQ PKEIC L GFC+EVK +PM+TLVPA KN++PALE
Sbjct: 727 CKNYISQYSEIAIQMMMHMQ---PKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALE 897
Query: 300 MMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKC 359
+++P +++ V A + + C+ C+F++ + ++LI NN TE+ ++ C+ LP +C
Sbjct: 898 LVEPIKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEEC 1077
Query: 360 QEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXX 419
QEVV T+G S+L I + EV+P +C ++ LC+ PA+
Sbjct: 1078QEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR---------LPALT----------- 1197
Query: 420 XXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDP 479
HV K+GGFCEVCKK V YL+ NLEKNSTK+EILAALEKGCSFLPDP
Sbjct: 1198-----------VHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP 1344
Query: 480 YQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNM 539
YQKQCD FVAEYEP+L+EILVEVMDP FVC KIG CPSA+K LLGTEKC+WGPSYWCQN
Sbjct: 1345YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNT 1524
Query: 540 ETAARCNAVDHCKRHVWN 557
ETAA+CNAV+HCKRHVWN
Sbjct: 1525ETAAQCNAVEHCKRHVWN 1578
>ref|XM_045140.2| Homo sapiens prosaposin (variant Gaucher disease and variant
metachromatic leukodystrophy) (PSAP), mRNA
Length = 2743
Score = 721 bits (1860), Expect = 0.0
Identities = 345/558 (61%), Positives = 423/558 (74%), Gaps = 1/558 (0%)
Frame = +2
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PV K C+ GSAV C++VKTA DCGAVKHC Q VW+KPT KS
Sbjct: 29 MYALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKS 208
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICK VVT AG++LKDNAT+EEIL YLEKTC+W+ ++SASCKE+VDSYLPVILD+
Sbjct: 209 LPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDI 388
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLY 179
IKGEMS PGEVCSALNLC+SLQ++LAE N QKQLESNKIPE+DM VVAPFM+NIPLLLY
Sbjct: 389 IKGEMSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLY 568
Query: 180 PQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDI 239
PQD PRS+PQPK N DVCQDC+++V+D+QTAV+TNS+F+Q V+HVKE+CDRLGPG++DI
Sbjct: 569 PQDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADI 748
Query: 240 CKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE 299
CKNY+ QYSE+ +QM+MHMQ PKEIC L GFC+EVK +PM+TLVPA KN++PALE
Sbjct: 749 CKNYISQYSEIAIQMMMHMQ---PKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALE 919
Query: 300 MMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKC 359
+++P +++ V A + + C+ C+F++ + ++LI NN TE+ ++ C+ LP +C
Sbjct: 920 LVEPIKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEEC 1099
Query: 360 QEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXX 419
QEVV T+G S+L I + EV+P +C ++ LC+ PA+
Sbjct: 1100QEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR---------LPALT----------- 1219
Query: 420 XXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDP 479
HV K+GGFCEVCKK V YL+ NLEKNSTK+EILAALEKGCSFLPDP
Sbjct: 1220-----------VHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP 1366
Query: 480 YQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNM 539
YQKQCD FVAEYEP+L+EILVEVMDP FVC KIG CPSA+K LLGTEKC+WGPSYWCQN
Sbjct: 1367YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNT 1546
Query: 540 ETAARCNAVDHCKRHVWN 557
ETAA+CNAV+HCKRHVWN
Sbjct: 1547ETAAQCNAVEHCKRHVWN 1600
>ref|NM_002778.1| Homo sapiens prosaposin (variant Gaucher disease and variant
metachromatic leukodystrophy) (PSAP), mRNA
Length = 2767
Score = 721 bits (1860), Expect = 0.0
Identities = 345/558 (61%), Positives = 423/558 (74%), Gaps = 1/558 (0%)
Frame = +3
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PV K C+ GSAV C++VKTA DCGAVKHC Q VW+KPT KS
Sbjct: 39 MYALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKS 218
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICK VVT AG++LKDNAT+EEIL YLEKTC+W+ ++SASCKE+VDSYLPVILD+
Sbjct: 219 LPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDI 398
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLY 179
IKGEMS PGEVCSALNLC+SLQ++LAE N QKQLESNKIPE+DM VVAPFM+NIPLLLY
Sbjct: 399 IKGEMSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLY 578
Query: 180 PQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDI 239
PQD PRS+PQPK N DVCQDC+++V+D+QTAV+TNS+F+Q V+HVKE+CDRLGPG++DI
Sbjct: 579 PQDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADI 758
Query: 240 CKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE 299
CKNY+ QYSE+ +QM+MHMQ PKEIC L GFC+EVK +PM+TLVPA KN++PALE
Sbjct: 759 CKNYISQYSEIAIQMMMHMQ---PKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALE 929
Query: 300 MMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKC 359
+++P +++ V A + + C+ C+F++ + ++LI NN TE+ ++ C+ LP +C
Sbjct: 930 LVEPIKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEEC 1109
Query: 360 QEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXX 419
QEVV T+G S+L I + EV+P +C ++ LC+ PA+
Sbjct: 1110QEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR---------LPALT----------- 1229
Query: 420 XXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDP 479
HV K+GGFCEVCKK V YL+ NLEKNSTK+EILAALEKGCSFLPDP
Sbjct: 1230-----------VHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP 1376
Query: 480 YQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNM 539
YQKQCD FVAEYEP+L+EILVEVMDP FVC KIG CPSA+K LLGTEKC+WGPSYWCQN
Sbjct: 1377YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNT 1556
Query: 540 ETAARCNAVDHCKRHVWN 557
ETAA+CNAV+HCKRHVWN
Sbjct: 1557ETAAQCNAVEHCKRHVWN 1610
>gb|J03077.1|HUMGLBA Human co-beta glucosidase (proactivator) mRNA, complete cds
Length = 2767
Score = 721 bits (1860), Expect = 0.0
Identities = 345/558 (61%), Positives = 423/558 (74%), Gaps = 1/558 (0%)
Frame = +3
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PV K C+ GSAV C++VKTA DCGAVKHC Q VW+KPT KS
Sbjct: 39 MYALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKS 218
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICK VVT AG++LKDNAT+EEIL YLEKTC+W+ ++SASCKE+VDSYLPVILD+
Sbjct: 219 LPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDI 398
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLY 179
IKGEMS PGEVCSALNLC+SLQ++LAE N QKQLESNKIPE+DM VVAPFM+NIPLLLY
Sbjct: 399 IKGEMSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLY 578
Query: 180 PQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDI 239
PQD PRS+PQPK N DVCQDC+++V+D+QTAV+TNS+F+Q V+HVKE+CDRLGPG++DI
Sbjct: 579 PQDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADI 758
Query: 240 CKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE 299
CKNY+ QYSE+ +QM+MHMQ PKEIC L GFC+EVK +PM+TLVPA KN++PALE
Sbjct: 759 CKNYISQYSEIAIQMMMHMQ---PKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALE 929
Query: 300 MMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKC 359
+++P +++ V A + + C+ C+F++ + ++LI NN TE+ ++ C+ LP +C
Sbjct: 930 LVEPIKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEEC 1109
Query: 360 QEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXX 419
QEVV T+G S+L I + EV+P +C ++ LC+ PA+
Sbjct: 1110QEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR---------LPALT----------- 1229
Query: 420 XXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDP 479
HV K+GGFCEVCKK V YL+ NLEKNSTK+EILAALEKGCSFLPDP
Sbjct: 1230-----------VHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP 1376
Query: 480 YQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNM 539
YQKQCD FVAEYEP+L+EILVEVMDP FVC KIG CPSA+K LLGTEKC+WGPSYWCQN
Sbjct: 1377YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNT 1556
Query: 540 ETAARCNAVDHCKRHVWN 557
ETAA+CNAV+HCKRHVWN
Sbjct: 1557ETAAQCNAVEHCKRHVWN 1610
>gb|BC004275.1|BC004275 Homo sapiens, prosaposin (variant Gaucher disease and variant
metachromatic leukodystrophy), clone MGC:10834
IMAGE:3615413, mRNA, complete cds
Length = 2748
Score = 721 bits (1860), Expect = 0.0
Identities = 345/558 (61%), Positives = 423/558 (74%), Gaps = 1/558 (0%)
Frame = +2
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PV K C+ GSAV C++VKTA DCGAVKHC Q VW+KPT KS
Sbjct: 14 MYALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKS 193
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICK VVT AG++LKDNAT+EEIL YLEKTC+W+ ++SASCKE+VDSYLPVILD+
Sbjct: 194 LPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDI 373
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLY 179
IKGEMS PGEVCSALNLC+SLQ++LAE N QKQLESNKIPE+DM VVAPFM+NIPLLLY
Sbjct: 374 IKGEMSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLY 553
Query: 180 PQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDI 239
PQD PRS+PQPK N DVCQDC+++V+D+QTAV+TNS+F+Q V+HVKE+CDRLGPG++DI
Sbjct: 554 PQDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADI 733
Query: 240 CKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE 299
CKNY+ QYSE+ +QM+MHMQ PKEIC L GFC+EVK +PM+TLVPA KN++PALE
Sbjct: 734 CKNYISQYSEIAIQMMMHMQ---PKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALE 904
Query: 300 MMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKC 359
+++P +++ V A + + C+ C+F++ + ++LI NN TE+ ++ C+ LP +C
Sbjct: 905 LVEPIKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEEC 1084
Query: 360 QEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXX 419
QEVV T+G S+L I + EV+P +C ++ LC+ PA+
Sbjct: 1085QEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR---------LPALT----------- 1204
Query: 420 XXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDP 479
HV K+GGFCEVCKK V YL+ NLEKNSTK+EILAALEKGCSFLPDP
Sbjct: 1205-----------VHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP 1351
Query: 480 YQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNM 539
YQKQCD FVAEYEP+L+EILVEVMDP FVC KIG CPSA+K LLGTEKC+WGPSYWCQN
Sbjct: 1352YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNT 1531
Query: 540 ETAARCNAVDHCKRHVWN 557
ETAA+CNAV+HCKRHVWN
Sbjct: 1532ETAAQCNAVEHCKRHVWN 1585
>gb|M32221.1|HUMSAPABCD Human saposin proteins A-D mRNA, complete cds
Length = 2171
Score = 721 bits (1860), Expect = 0.0
Identities = 345/558 (61%), Positives = 423/558 (74%), Gaps = 1/558 (0%)
Frame = +1
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PV K C+ GSAV C++VKTA DCGAVKHC Q VW+KPT KS
Sbjct: 7 MYALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKS 186
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICK VVT AG++LKDNAT+EEIL YLEKTC+W+ ++SASCKE+VDSYLPVILD+
Sbjct: 187 LPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDI 366
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLY 179
IKGEMS PGEVCSALNLC+SLQ++LAE N QKQLESNKIPE+DM VVAPFM+NIPLLLY
Sbjct: 367 IKGEMSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLY 546
Query: 180 PQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDI 239
PQD PRS+PQPK N DVCQDC+++V+D+QTAV+TNS+F+Q V+HVKE+CDRLGPG++DI
Sbjct: 547 PQDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADI 726
Query: 240 CKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE 299
CKNY+ QYSE+ +QM+MHMQ PKEIC L GFC+EVK +PM+TLVPA KN++PALE
Sbjct: 727 CKNYISQYSEIAIQMMMHMQ---PKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALE 897
Query: 300 MMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKC 359
+++P +++ V A + + C+ C+F++ + ++LI NN TE+ ++ C+ LP +C
Sbjct: 898 LVEPIKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEEC 1077
Query: 360 QEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXX 419
QEVV T+G S+L I + EV+P +C ++ LC+ PA+
Sbjct: 1078QEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR---------LPALT----------- 1197
Query: 420 XXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDP 479
HV K+GGFCEVCKK V YL+ NLEKNSTK+EILAALEKGCSFLPDP
Sbjct: 1198-----------VHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP 1344
Query: 480 YQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNM 539
YQKQCD FVAEYEP+L+EILVEVMDP FVC KIG CPSA+K LLGTEKC+WGPSYWCQN
Sbjct: 1345YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNT 1524
Query: 540 ETAARCNAVDHCKRHVWN 557
ETAA+CNAV+HCKRHVWN
Sbjct: 1525ETAAQCNAVEHCKRHVWN 1578
>gb|BC001503.1|BC001503 Homo sapiens, prosaposin (variant Gaucher disease and variant
metachromatic leukodystrophy), clone MGC:2254
IMAGE:3508263, mRNA, complete cds
Length = 2771
Score = 721 bits (1860), Expect = 0.0
Identities = 345/558 (61%), Positives = 423/558 (74%), Gaps = 1/558 (0%)
Frame = +3
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PV K C+ GSAV C++VKTA DCGAVKHC Q VW+KPT KS
Sbjct: 15 MYALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKS 194
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICK VVT AG++LKDNAT+EEIL YLEKTC+W+ ++SASCKE+VDSYLPVILD+
Sbjct: 195 LPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDI 374
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLY 179
IKGEMS PGEVCSALNLC+SLQ++LAE N QKQLESNKIPE+DM VVAPFM+NIPLLLY
Sbjct: 375 IKGEMSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLY 554
Query: 180 PQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDI 239
PQD PRS+PQPK N DVCQDC+++V+D+QTAV+TNS+F+Q V+HVKE+CDRLGPG++DI
Sbjct: 555 PQDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADI 734
Query: 240 CKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE 299
CKNY+ QYSE+ +QM+MHMQ PKEIC L GFC+EVK +PM+TLVPA KN++PALE
Sbjct: 735 CKNYISQYSEIAIQMMMHMQ---PKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALE 905
Query: 300 MMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKC 359
+++P +++ V A + + C+ C+F++ + ++LI NN TE+ ++ C+ LP +C
Sbjct: 906 LVEPIKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEEC 1085
Query: 360 QEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXX 419
QEVV T+G S+L I + EV+P +C ++ LC+ PA+
Sbjct: 1086QEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR---------LPALT----------- 1205
Query: 420 XXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDP 479
HV K+GGFCEVCKK V YL+ NLEKNSTK+EILAALEKGCSFLPDP
Sbjct: 1206-----------VHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP 1352
Query: 480 YQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNM 539
YQKQCD FVAEYEP+L+EILVEVMDP FVC KIG CPSA+K LLGTEKC+WGPSYWCQN
Sbjct: 1353YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNT 1532
Query: 540 ETAARCNAVDHCKRHVWN 557
ETAA+CNAV+HCKRHVWN
Sbjct: 1533ETAAQCNAVEHCKRHVWN 1586
>gb|BC007612.1|BC007612 Homo sapiens, prosaposin (variant Gaucher disease and variant
metachromatic leukodystrophy), clone MGC:15695
IMAGE:3351606, mRNA, complete cds
Length = 2775
Score = 721 bits (1860), Expect = 0.0
Identities = 345/558 (61%), Positives = 423/558 (74%), Gaps = 1/558 (0%)
Frame = +1
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PV K C+ GSAV C++VKTA DCGAVKHC Q VW+KPT KS
Sbjct: 19 MYALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKS 198
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICK VVT AG++LKDNAT+EEIL YLEKTC+W+ ++SASCKE+VDSYLPVILD+
Sbjct: 199 LPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDI 378
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLY 179
IKGEMS PGEVCSALNLC+SLQ++LAE N QKQLESNKIPE+DM VVAPFM+NIPLLLY
Sbjct: 379 IKGEMSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLY 558
Query: 180 PQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDI 239
PQD PRS+PQPK N DVCQDC+++V+D+QTAV+TNS+F+Q V+HVKE+CDRLGPG++DI
Sbjct: 559 PQDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADI 738
Query: 240 CKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE 299
CKNY+ QYSE+ +QM+MHMQ PKEIC L GFC+EVK +PM+TLVPA KN++PALE
Sbjct: 739 CKNYISQYSEIAIQMMMHMQ---PKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALE 909
Query: 300 MMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKC 359
+++P +++ V A + + C+ C+F++ + ++LI NN TE+ ++ C+ LP +C
Sbjct: 910 LVEPIKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEEC 1089
Query: 360 QEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXX 419
QEVV T+G S+L I + EV+P +C ++ LC+ PA+
Sbjct: 1090QEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR---------LPALT----------- 1209
Query: 420 XXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDP 479
HV K+GGFCEVCKK V YL+ NLEKNSTK+EILAALEKGCSFLPDP
Sbjct: 1210-----------VHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP 1356
Query: 480 YQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNM 539
YQKQCD FVAEYEP+L+EILVEVMDP FVC KIG CPSA+K LLGTEKC+WGPSYWCQN
Sbjct: 1357YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNT 1536
Query: 540 ETAARCNAVDHCKRHVWN 557
ETAA+CNAV+HCKRHVWN
Sbjct: 1537ETAAQCNAVEHCKRHVWN 1590
>gb|M60257.1|HUMSAPC1 Human mutant cerebroside sulfate activator protein (SAP-MU-0) mRNA,
complete cds, without the 9 bp insertion found in
alternatively spliced mRNA
Length = 2717
Score = 717 bits (1850), Expect = 0.0
Identities = 344/558 (61%), Positives = 422/558 (74%), Gaps = 1/558 (0%)
Frame = +1
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PV K C+ GSAV C++VKTA DCGAVKHC Q VW+KPT KS
Sbjct: 1 MYALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVKS 180
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICK VVT AG++LKDNAT+EEIL YLEKTC+W+ ++SASCKE+VDSYLPVILD+
Sbjct: 181 LPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDI 360
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLY 179
IKGEMS PGEVCSALNLC+SLQ++LAE N QKQLESNKIPE+DM VVAPFM+NIPLLLY
Sbjct: 361 IKGEMSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLLLY 540
Query: 180 PQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDI 239
PQD PRS+PQPK N DVCQDC+++V+D+QTAV+TNS+F+Q V+HVKE+CDRLGPG++DI
Sbjct: 541 PQDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADI 720
Query: 240 CKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE 299
KNY+ QYSE+ +QM+MHMQ PKEIC L GFC+EVK +PM+TLVPA KN++PALE
Sbjct: 721 SKNYISQYSEIAIQMMMHMQ---PKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALE 891
Query: 300 MMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKC 359
+++P +++ V A + + C+ C+F++ + ++LI NN TE+ ++ C+ LP +C
Sbjct: 892 LVEPIKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEEC 1071
Query: 360 QEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXX 419
QEVV T+G S+L I + EV+P +C ++ LC+ PA+
Sbjct: 1072QEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR---------LPALT----------- 1191
Query: 420 XXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDP 479
HV K+GGFCEVCKK V YL+ NLEKNSTK+EILAALEKGCSFLPDP
Sbjct: 1192-----------VHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP 1338
Query: 480 YQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNM 539
YQKQCD FVAEYEP+L+EILVEVMDP FVC KIG CPSA+K LLGTEKC+WGPSYWCQN
Sbjct: 1339YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNT 1518
Query: 540 ETAARCNAVDHCKRHVWN 557
ETAA+CNAV+HCKRHVWN
Sbjct: 1519ETAAQCNAVEHCKRHVWN 1572
>dbj|AB036791.1|AB036791 Bos taurus psap mRNA for prosaposin, complete cds
Length = 1685
Score = 701 bits (1808), Expect = 0.0
Identities = 339/559 (60%), Positives = 421/559 (74%), Gaps = 2/559 (0%)
Frame = +2
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PV + C+ GSAV C++VKTA DCGAV+HC Q VWSKPT KS
Sbjct: 47 MYSFFVLASLLGGALASPVLGLRECTRGSAVWCQNVKTAADCGAVQHCLQTVWSKPTVKS 226
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICK V+T AGNLLKDNAT++EIL YLE+TC+W+ ++SASCKE+VDSYLPVILDM
Sbjct: 227 LPCDICKDVITAAGNLLKDNATEQEILMYLERTCDWLPKPNMSASCKEIVDSYLPVILDM 406
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLY 179
IKG+MS+PGEVCSALNLC+SLQ++LAE N QKQLESN+IPE+DMA VVAPFM+NIP LLY
Sbjct: 407 IKGQMSHPGEVCSALNLCESLQKHLAELNHQKQLESNQIPELDMAEVVAPFMANIPFLLY 586
Query: 180 PQDHPRSQPQPK-ANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSD 238
PQD S+PQPK AN +VCQDC++LV+DVQ A++TNS+F++ VDH KE+CDRLGPG+SD
Sbjct: 587 PQDGSHSKPQPKKANGNVCQDCIQLVTDVQEALRTNSTFVEALVDHAKEECDRLGPGMSD 766
Query: 239 ICKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPAL 298
+CKNY++QYSEV +QM+MHMQ PKEICVLAGFC+EVK +PMKTLVPA +N++PAL
Sbjct: 767 MCKNYINQYSEVAIQMVMHMQ---PKEICVLAGFCDEVKEMPMKTLVPAEVVSENVIPAL 937
Query: 299 EMMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTK 358
+++P +++ A I C+ C+FV+ + ++LI NN TEE ++ L C+ LP +
Sbjct: 938 GLVEPIKKDPAPAKADIYCEVCEFVVKEVAKLIDNNRTEEEILHALDKVCSKLPTSLAEQ 1117
Query: 359 CQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXX 418
CQEVV T+G S+L I + E +P +C ++ LC++R PA +
Sbjct: 1118CQEVVDTYGSSILSILLDEASPELVCSMLHLCSSRG-------LPAATV----------- 1243
Query: 419 XXXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPD 478
V P+K+GGFCEVCKK V YL+ NLEKNSTKE+ILAALEKGCSFLPD
Sbjct: 1244-------------RVMPRKDGGFCEVCKKLVGYLDRNLEKNSTKEQILAALEKGCSFLPD 1384
Query: 479 PYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQN 538
Y+KQCD FV EYEP+L+EILVEVMDP FVC KIG CP+A+K LLG EKCVWGPSYWCQN
Sbjct: 1385QYRKQCDQFVTEYEPVLIEILVEVMDPSFVCLKIGACPAAHKPLLGAEKCVWGPSYWCQN 1564
Query: 539 METAARCNAVDHCKRHVWN 557
ME+AA CNAV+HC+RHVWN
Sbjct: 1565MESAALCNAVEHCRRHVWN 1621
>dbj|AK057878.1|AK057878 Homo sapiens cDNA FLJ25149 fis, clone CBR07687, highly similar to
PROACTIVATOR POLYPEPTIDE PRECURSOR
Length = 1683
Score = 633 bits (1632), Expect = e-179
Identities = 309/556 (55%), Positives = 383/556 (68%)
Frame = +3
Query: 1 MYXXXXXXXXXXXXXXXPVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
MY PV K C+ GSAV C++V+TA DCGAVKHC Q VW+KPT KS
Sbjct: 51 MYALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVETASDCGAVKHCLQTVWNKPTVKS 230
Query: 61 LPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDM 120
LPCDICK VVT AG++LKDNAT+EEIL YLEKTC+W+ ++SASCKE+VDSYLPVILD
Sbjct: 231 LPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILD- 407
Query: 121 IKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYP 180
M VVAPFM+NIPLLLYP
Sbjct: 408 ------------------------------------------MTEVVAPFMANIPLLLYP 461
Query: 181 QDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIC 240
QD PRS+PQPK N DVCQDC+++V+D+QTAV+TNS+F+Q V+HVKE+CDRLGPG++DIC
Sbjct: 462 QDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADIC 641
Query: 241 KNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM 300
KNY+ QYSE+ +QM+MHM DQQPKEIC L GFC+EVK +PM+TLVPA KN++PALE+
Sbjct: 642 KNYISQYSEIAIQMMMHM-DQQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALEL 818
Query: 301 MDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQ 360
++P +++ V A + + C+ C+F++ + ++LI NN TE+ ++ C+ LP +CQ
Sbjct: 819 VEPIKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQ 998
Query: 361 EVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXXX 420
EVV T+G S+L I + EV+P +C ++ LC+ PA+
Sbjct: 999 EVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR---------LPALT------------ 1115
Query: 421 XXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPY 480
HV K+GGFCEVCKK V YL+ NLEKNSTK+EILAALEKGCSFLPDPY
Sbjct: 1116----------VHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPY 1265
Query: 481 QKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNME 540
QKQCD FVAEYEP+L+EILVEVMDP FVC KIG CPSA+K LLGTEKC+WGPSYWCQN E
Sbjct: 1266QKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNTE 1445
Query: 541 TAARCNAVDHCKRHVW 556
TAA+CNAV+HCKRHVW
Sbjct: 1446TAAQCNAVEHCKRHVW 1493
Score = 50.4 bits (119), Expect = 4e-04
Identities = 19/36 (52%), Positives = 26/36 (71%)
Frame = +3
Query: 522 LLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHVWN 557
+LG ++C G + WCQN+ETA+ C AV HC + VWN
Sbjct: 105 VLGLKECTRGSAVWCQNVETASDCGAVKHCLQTVWN 212
>gb|AF108656.1|AF108656 Gallus gallus prosaposin mRNA, complete cds
Length = 3831
Score = 559 bits (1441), Expect = e-157
Identities = 265/542 (48%), Positives = 368/542 (67%), Gaps = 2/542 (0%)
Frame = +1
Query: 18 PVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLL 77
PV K C+ G V C+ ++TA CGAVKHCQQ VWSKP S+PCD+CK +VT G +L
Sbjct: 55 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVL 234
Query: 78 KDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNL 137
KDN T++EI YLEKTCE++ D L++ CKE+VDSYLPVI+DMIK E P VCSAL+L
Sbjct: 235 KDNGTEDEIRSYLEKTCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSL 414
Query: 138 CQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDV 196
CQSLQ++LA QKQL+SNKIPE+D + + +PFM+N+PLLLYPQD P+ + KA EDV
Sbjct: 415 CQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQ--KSKATEDV 588
Query: 197 CQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLM 256
CQDC++LV+DVQ AV+TN++F++ V H KE+CDRLGPG+SD+CK+Y+ +YS++ +QM+M
Sbjct: 589 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMM 768
Query: 257 HMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVIL 316
HM+DQQPK+IC + GFC VK VP++TLVPA + + + M+ E+ VQ +
Sbjct: 769 HMKDQQPKDICAMVGFCPSVKSVPLQTLVPA-QVVHEV-----KMETVEKATVQEKTFSV 930
Query: 317 CQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIH 376
C+ C+ ++ + + L+ +N TEE +V + C LLP + +C++ + +G +L+D+ +
Sbjct: 931 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 1110
Query: 377 EVNPSSLCGVIGLCAA-RPELVEALEQPAPAIVSALLXXXXXXXXXXXXXXXXXXXHVPP 435
NP ++C ++ CAA +P + +PA
Sbjct: 1111ATNPEAVCVMLKCCAANKPPQQPVVVKPA------------------------------- 1197
Query: 436 QKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLL 495
GGFC++CK V Y + LEKN+T EI A LEK C FLP+ QC FV +YEP++
Sbjct: 1198---GGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVV 1368
Query: 496 LEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHV 555
+++L E+MDP FVC+K+GVC +A K LLG + CVWGP YWC+NMETAA+CNAVDHC+RHV
Sbjct: 1369VQLLAEMMDPTFVCTKLGVCGAAKKPLLGDDACVWGPGYWCKNMETAAQCNAVDHCRRHV 1548
Query: 556 WN 557
WN
Sbjct: 1549WN 1554
>dbj|AB003471.1|AB003471 Gallus gallus mRNA for prosaposin, complete cds
Length = 1859
Score = 557 bits (1435), Expect = e-156
Identities = 264/542 (48%), Positives = 367/542 (67%), Gaps = 2/542 (0%)
Frame = +1
Query: 18 PVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLL 77
PV K C+ G V C+ ++TA CGAVKHCQQ VWSKP S+PCD+CK +VT G +L
Sbjct: 64 PVLWQKDCAKGPEVWCQSLRTASQCGAVKHCQQNVWSKPAVNSIPCDLCKELVTVVGKVL 243
Query: 78 KDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNL 137
KDN T++EI YLEK CE++ D L++ CKE+VDSYLPVI+DMIK E P VCSAL+L
Sbjct: 244 KDNGTEDEIRSYLEKRCEFLPDQGLASECKEIVDSYLPVIMDMIKEEFDKPEVVCSALSL 423
Query: 138 CQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDV 196
CQSLQ++LA QKQL+SNKIPE+D + + +PFM+N+PLLLYPQD P+ + KA EDV
Sbjct: 424 CQSLQKHLAAMKLQKQLQSNKIPELDFSELTSPFMANVPLLLYPQDKPKQ--KSKATEDV 597
Query: 197 CQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLM 256
CQDC++LV+DVQ AV+TN++F++ V H KE+CDRLGPG+SD+CK+Y+ +YS++ +QM+M
Sbjct: 598 CQDCIRLVTDVQEAVRTNATFVKSLVAHAKEECDRLGPGMSDMCKSYISEYSDLAIQMMM 777
Query: 257 HMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVIL 316
HM+DQQPK+IC + GFC VK VP++TLVPA + + + M+ E+ VQ +
Sbjct: 778 HMKDQQPKDICAMVGFCPSVKSVPLQTLVPA-QVVHEV-----KMETVEKATVQEKTFSV 939
Query: 317 CQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIH 376
C+ C+ ++ + + L+ +N TEE +V + C LLP + +C++ + +G +L+D+ +
Sbjct: 940 CEICETMVKEVTGLLESNKTEEEIVHEMEVVCYLLPASVKDQCKDFIEVYGQALIDMLLE 1119
Query: 377 EVNPSSLCGVIGLCAA-RPELVEALEQPAPAIVSALLXXXXXXXXXXXXXXXXXXXHVPP 435
NP ++C ++ CAA +P + +PA
Sbjct: 1120ATNPEAVCVMLKCCAANKPPQQPVVVKPA------------------------------- 1206
Query: 436 QKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLL 495
GGFC++CK V Y + LEKN+T EI A LEK C FLP+ QC FV +YEP++
Sbjct: 1207---GGFCDICKMIVAYADKELEKNATTTEIEALLEKVCHFLPESVSDQCVQFVEQYEPVV 1377
Query: 496 LEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHV 555
+++L E+MDP FVC+K+GVC +A K LLG + CVWGP YWC+NMETAA+CNAVDHC+RHV
Sbjct: 1378VQLLAEMMDPTFVCTKLGVCGAAKKPLLGEDACVWGPGYWCKNMETAAQCNAVDHCRRHV 1557
Query: 556 WN 557
WN
Sbjct: 1558WN 1563
>gb|AF276996.1|AF276996 Danio rerio lysosomal cofactor/neurotrophic factor prosaposin mRNA,
complete cds
Length = 2391
Score = 464 bits (1195), Expect = e-129
Identities = 226/551 (41%), Positives = 334/551 (60%), Gaps = 11/551 (1%)
Frame = +3
Query: 18 PVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLL 77
P+ + C+ G C++VKTA CGAV+HCQQ VW+KP K++PCD+CK V+ LL
Sbjct: 114 PLLGTEQCARGPPYWCQNVKTASLCGAVQHCQQNVWNKPQMKTVPCDLCKEVLVVVEQLL 293
Query: 78 KDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNL 137
KDN T+ E+L YLEK C+ I D L+ CKE+VD+Y PV++ +I+GE+ +PG VC AL L
Sbjct: 294 KDNVTESELLGYLEKACQLIPDEGLANQCKEIVDNYFPVVMGIIQGELDDPGVVCGALGL 473
Query: 138 CQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDVC 197
C S Q LA + QL SN+IP+VD+ + V+PF+ NIP LLYP++ + PK DVC
Sbjct: 474 CVSQQAALA---KAQLTSNEIPQVDLNQRVSPFLLNIPQLLYPEE---KRETPKQKGDVC 635
Query: 198 QDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLMH 257
QDC+ +SD Q + NSSFI + V+ C+ LGPG+SD+CK Y+ QY + Q LM
Sbjct: 636 QDCVTFISDTQDEARVNSSFINTLIAQVENQCELLGPGMSDMCKEYISQYGPLVFQQLMS 815
Query: 258 MQDQQPKEICVLAGFC-NEVKRVPMKTLVPATE-TIKNILPALEMMDPY----EQNLVQA 311
M QPK+IC AGFC + K VPM+ L+PA + PA+++ P +NLV+
Sbjct: 816 M---QPKDICARAGFCPTKQKSVPMEKLLPAKSIPAVKMFPAVKVEKPVATMPAKNLVRV 986
Query: 312 HNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLL 371
+ C C++VM + +I + +E +V+ + C +LP +C++++ T+G +++
Sbjct: 987 RDSPQCAICEYVMKEIENMIQDQTSEAEIVQAVEKVCNILPSTLTAQCKDLIETYGQAII 1166
Query: 372 DIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXXXXXXXXXXXXXX 431
D+ + E +P ++C + LC+
Sbjct: 1167DLLVQEADPKTVCSFLALCSG-------------------------------------VS 1235
Query: 432 HVPPQKN-----GGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDD 486
HVP GGFC+VCK V Y++ LE+N+T+ EI A+ K CSFLPD + +C+
Sbjct: 1236HVPVMDKQHFAAGGFCDVCKMAVRYVDGILEQNATQSEIEEAVLKVCSFLPDAVKDECNQ 1415
Query: 487 FVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCN 546
+ +YEPLL+++L++ +DP FVC K+G CP A + LLG +C WGP+YWC+N++TAARCN
Sbjct: 1416LIEQYEPLLVQLLLQTLDPDFVCMKLGACPEAVQRLLGLNQCSWGPAYWCKNVQTAARCN 1595
Query: 547 AVDHCKRHVWN 557
A+DHC+RHVW+
Sbjct: 1596ALDHCRRHVWS 1628
Score = 42.0 bits (97), Expect = 0.16
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 25 CSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLP 62
CS G A C++V+TA C A+ HC++ VWS ++ LP
Sbjct: 1539 CSWGPAYWCKNVQTAARCNALDHCRRHVWS*SASRILP 1652
>gb|AF108655.1|AF108655 Danio rerio prosaposin precursor, mRNA, complete cds
Length = 2402
Score = 445 bits (1145), Expect = e-123
Identities = 221/551 (40%), Positives = 327/551 (59%), Gaps = 11/551 (1%)
Frame = +1
Query: 18 PVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLL 77
P+ + C+ G C++VKTA CGAV+HCQQ VW+KP K++PCD+CK V+ LL
Sbjct: 130 PLLGTEQCARGPPYWCQNVKTASLCGAVQHCQQNVWNKPQMKTVPCDLCKEVLVVVEQLL 309
Query: 78 KDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNL 137
KDN T+ E+L YLEK C+ I D L+ CKE+V + KGE+ +PG VC AL L
Sbjct: 310 KDNVTESELLGYLEKACQLIPDEGLANQCKEIVTTTSQFSWASSKGELDDPGVVCGALGL 489
Query: 138 CQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDVC 197
C S Q LA + QL SN+IP+VD+ + V+PF+ NIP LLYP++ + PK DVC
Sbjct: 490 CVSQQAALA---KAQLTSNEIPQVDLNQRVSPFLLNIPQLLYPEE---KRETPKQKGDVC 651
Query: 198 QDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLMH 257
QDC+ +SD Q + NSSFI + V+ C+ LGPG+SD+CK Y+ QY + Q LM
Sbjct: 652 QDCVTFISDTQDEARVNSSFINTLIAQVENQCELLGPGMSDMCKEYISQYGPLVFQQLMS 831
Query: 258 MQDQQPKEICVLAGFC-NEVKRVPMKTLVPATE-TIKNILPALEMMDPY----EQNLVQA 311
M +QQPK+IC AGFC + K VPM+ L+PA + PA+++ P +NLV+
Sbjct: 832 M-EQQPKDICARAGFCPTKQKSVPMEKLLPAKSIPAVKMFPAVKVEKPVATMPAKNLVRV 1008
Query: 312 HNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLL 371
+ C C++VM + +I + +E +V+ + C +LP +C++++ T+G +++
Sbjct: 1009RDSPQCAICEYVMKEIENMIQDQTSEAEIVQAVEKVCNILPSTLTAQCKDLIETYGQAII 1188
Query: 372 DIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXXXXXXXXXXXXXX 431
D+ + E +P ++C + LC+
Sbjct: 1189DLLVQEADPKTVCSFLALCSG-------------------------------------VS 1257
Query: 432 HVPPQKN-----GGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDD 486
HVP GGFC+VCK V Y++ LE+N+T+ EI A+ K CSFLP + +C+
Sbjct: 1258HVPVMDKQHFAAGGFCDVCKMAVRYVDGILEQNATQSEIEEAVLKVCSFLPYAVKDECNQ 1437
Query: 487 FVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCN 546
+ +YEPLL+++L++ +DP FVC K+G CP A + LLG +C WGP+YWC+N++TAARCN
Sbjct: 1438LIEQYEPLLVQLLLQTLDPDFVCMKLGACPEAVQRLLGLNQCSWGPAYWCKNVQTAARCN 1617
Query: 547 AVDHCKRHVWN 557
A++HC+RHVW+
Sbjct: 1618ALNHCRRHVWS 1650
Score = 42.4 bits (98), Expect = 0.12
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +1
Query: 25 CSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLP 62
CS G A C++V+TA C A+ HC++ VWS ++ LP
Sbjct: 1561 CSWGPAYWCKNVQTAARCNALNHCRRHVWS*SASRILP 1674
>dbj|AK009408.1|AK009408 Mus musculus adult male tongue cDNA, RIKEN full-length enriched
library, clone:2310020A21:homolog to PROSAPOSIN, full
insert sequence
Length = 2232
Score = 239 bits (609), Expect(2) = 2e-76
Identities = 145/440 (32%), Positives = 229/440 (51%), Gaps = 1/440 (0%)
Frame = +1
Query: 118 LDMIKG-EMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPL 176
L M+ G + ++ VC+AL LC+ LQ +LAE ++ + + D V+APF+SN L
Sbjct: 397 LSMLSGAQETDLASVCTALTLCEPLQRHLAETTSER----PLTQEDANEVMAPFLSNGAL 564
Query: 177 LLYPQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGV 236
+P P VC DC++L+S +Q A+++N + + V + C +GPG+
Sbjct: 565 SFHPSQMPEGA--------VCHDCVQLISLLQDALESNLTLAEVTVQN---QCQSMGPGL 711
Query: 237 SDICKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILP 296
+ +C+NY+ + Q L Q P+E+C GFC E + T V A + + P
Sbjct: 712 AALCENYIHRQFVPAKQTL---QGLPPQEVCRKGGFC-ERESAHWLTRVAAVDGV----P 867
Query: 297 ALEMMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPAR 356
+LEM P N +Q + C C ++ + + +V N+TE L+ L C ++P+P
Sbjct: 868 SLEMEMP-RTNELQMQLGLTCDVCLNLVQELDKWLVTNSTEALISHTLERVCTVVPEPLV 1044
Query: 357 TKCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXX 416
+C +V T+ P L+ + + +V P +C I LC ++ + A +I A+
Sbjct: 1045QQCITLVDTYSPELVQL-MSKVTPEKVCETIKLCGSK--------RRARSISRAV----- 1182
Query: 417 XXXXXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFL 476
V + G FC+ CK+ + NL+ STK +IL A + GC L
Sbjct: 1183---------ATTPSLPVDEENQGSFCQGCKRLLGMSSQNLDHKSTKRDILNAFKGGCRIL 1335
Query: 477 PDPYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWC 536
P PY QC+ FVAEYEP+L+E L +M+P +C K+G C LLGT++CV GPS+WC
Sbjct: 1336PLPYVMQCNRFVAEYEPVLIESLKFMMNPTDLCKKMGACHGPKTPLLGTDQCVMGPSFWC 1515
Query: 537 QNMETAARCNAVDHCKRHVW 556
++ E A CNA++HC+R VW
Sbjct: 1516KSPEAAEMCNALEHCQRLVW 1575
Score = 73.6 bits (179), Expect(2) = 2e-76
Identities = 31/66 (46%), Positives = 43/66 (64%)
Frame = +2
Query: 48 CQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCK 107
CQ VW+KPT KSLPC +C+ V AGN + AT+ +IL + KTCEW+ SA CK
Sbjct: 188 CQSAVWNKPTVKSLPCSVCQDVAAAAGNGVNPGATESDILTSVMKTCEWLPSQESSAKCK 367
Query: 108 EVVDSY 113
+V+++
Sbjct: 368 WMVNNH 385
Score = 39.7 bits (91), Expect = 0.78
Identities = 15/42 (35%), Positives = 24/42 (56%)
Frame = +1
Query: 18 PVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAK 59
P+ C G + C+ + A C A++HCQ++VW KP +K
Sbjct: 1468 PLLGTDQCVMGPSFWCKSPEAAEMCNALEHCQRLVWKKPVSK 1593
>ref|XM_084496.1| Homo sapiens similar to prosaposin (variant Gaucher disease and
variant metachromatic leukodystrophy) (H. sapiens)
(LOC143355), mRNA
Length = 1081
Score = 253 bits (645), Expect = 4e-65
Identities = 122/200 (61%), Positives = 141/200 (70%)
Frame = -2
Query: 358 KCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXX 417
+CQEVV T+G S+L I + EV+P +C ++ LC+ PA+
Sbjct: 1068 ECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR---------LPALT--------- 943
Query: 418 XXXXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLP 477
HV K+GGFCEVCKK V YL+ NLEKNSTK+EILAALEKGCSFLP
Sbjct: 942 -------------VHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLP 802
Query: 478 DPYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQ 537
DPYQKQCD FVAEYEP+L+EILVEVMDP FVC KIG CPSA+K LLGTEKC+WGPSYWCQ
Sbjct: 801 DPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQ 622
Query: 538 NMETAARCNAVDHCKRHVWN 557
N ETAA+CN V+HCKRHVWN
Sbjct: 621 NTETAAQCNVVEHCKRHVWN 562
Score = 62.8 bits (151), Expect = 9e-08
Identities = 35/155 (22%), Positives = 73/155 (46%)
Frame = -2
Query: 236 VSDICKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNIL 295
+S+ C+ VD Y + +L+ ++ P+ +C + C+ + L
Sbjct: 1077 LSEECQEVVDTYGSSILSILL--EEVSPELVCSMLHLCSGTR-----------------L 955
Query: 296 PALEMMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPA 355
PAL + ++ Q + C+ C+ ++ + N+T++ ++ L C+ LPDP
Sbjct: 954 PALTV------HVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPY 793
Query: 356 RTKCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLC 390
+ +C + V + P L++I + ++PS +C IG C
Sbjct: 792 QKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGAC 688
Score = 50.4 bits (119), Expect = 4e-04
Identities = 27/83 (32%), Positives = 46/83 (54%)
Frame = -2
Query: 63 CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIK 122
C++CK +V L+ N+T++EIL LEK C ++ D C + V Y PV+++++
Sbjct: 909 CEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPD-PYQKQCDQFVAEYEPVLIEILV 733
Query: 123 GEMSNPGEVCSALNLCQSLQEYL 145
E+ +P VC + C S + L
Sbjct: 732 -EVMDPSFVCLKIGACPSAHKPL 667
Score = 48.1 bits (113), Expect = 0.002
Identities = 43/173 (24%), Positives = 71/173 (40%)
Frame = -2
Query: 101 SLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPE 160
SLS C+EVVD+Y IL ++ E+S P VCS L+LC
Sbjct: 1080 SLSEECQEVVDTYGSSILSILLEEVS-PELVCSMLHLCSG-------------------- 964
Query: 161 VDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQG 220
+ +P L P+ + C+ C KLV + ++ NS+ Q
Sbjct: 963 -----------TRLPALTVHVTQPK-------DGGFCEVCKKLVGYLDRNLEKNST-KQE 841
Query: 221 FVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFC 273
+ +++ C L C +V +Y V +++L+ + D P +C+ G C
Sbjct: 840 ILAALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMD--PSFVCLKIGAC 688
>gb|S82555.1|S82555 Sulfated glycoprotein-1/SGP-1 [sheep, endometrium, mRNA Partial,
364 nt]
Length = 364
Score = 170 bits (430), Expect = 4e-40
Identities = 79/123 (64%), Positives = 98/123 (79%)
Frame = +2
Query: 204 VSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLMHMQDQQP 263
V+D+QTAV+TNS+F+QG VDHVKE+CDRLGPG++DICKNY+ QYSE+ VQM+MHM QP
Sbjct: 2 VTDIQTAVRTNSTFVQGLVDHVKEECDRLGPGMADICKNYLAQYSEIAVQMMMHM---QP 172
Query: 264 KEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTCQFV 323
KEI L GFC+EVK PM+TL PA E KNILPALE+ +P +Q + A +I CQ CQFV
Sbjct: 173 KEISALVGFCDEVKESPMRTLDPAKEASKNILPALELTEPNKQQEIPAQTLIFCQVCQFV 352
Query: 324 MNK 326
M +
Sbjct: 353 MRE 361
>gb|U57999.1|MMU57999 Mus musculus prosaposin (psap\SGP-1) gene, complete cds
Length = 12506
Score = 152 bits (383), Expect = 1e-34
Identities = 75/76 (98%), Positives = 76/76 (99%)
Frame = +1
Query: 337 EELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPEL 396
+ELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPEL
Sbjct: 10288 QELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPEL 10467
Query: 397 VEALEQPAPAIVSALL 412
VEALEQPAPAIVSALL
Sbjct: 10468 VEALEQPAPAIVSALL 10515
Score = 138 bits (347), Expect = 2e-30
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +2
Query: 126 SNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPR 185
SNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPR
Sbjct: 5042 SNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPR 5221
Query: 186 SQPQPKAN 193
SQPQPK +
Sbjct: 5222 SQPQPKVS 5245
Score = 115 bits (287), Expect = 1e-23
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = +3
Query: 432 HVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQ 483
HVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQ
Sbjct: 10662 HVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQ 10817
Score = 104 bits (260), Expect = 2e-20
Identities = 50/63 (79%), Positives = 54/63 (85%)
Frame = +1
Query: 192 ANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVC 251
ANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDI Y+ + C
Sbjct: 5476 ANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDIVSLYLAPWFG*C 5655
Query: 252 VQM 254
++
Sbjct: 5656 SEL 5664
Score = 95.5 bits (236), Expect = 1e-17
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +3
Query: 261 QQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYE 305
QQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYE
Sbjct: 9609 QQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYE 9743
Score = 93.2 bits (230), Expect = 6e-17
Identities = 42/43 (97%), Positives = 42/43 (97%)
Frame = +1
Query: 18 PVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
PVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTA S
Sbjct: 2152 PVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAVS 2280
Score = 92.0 bits (227), Expect = 1e-16
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +3
Query: 83 QEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEM 125
QEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEM
Sbjct: 3852 QEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEM 3980
Score = 89.0 bits (219), Expect = 1e-15
Identities = 38/40 (95%), Positives = 38/40 (95%)
Frame = +3
Query: 507 FVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCN 546
FV KIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCN
Sbjct: 11274 FVIQKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCN 11393
Score = 71.6 bits (174), Expect = 2e-10
Identities = 35/44 (79%), Positives = 39/44 (88%), Gaps = 2/44 (4%)
Frame = +3
Query: 296 PALEMMD--PYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATE 337
P+L+ + P +QNLVQAHNVILCQTCQFVMNKFSELIVNNATE
Sbjct: 9942 PSLKTLSSCPSQQNLVQAHNVILCQTCQFVMNKFSELIVNNATE 10073
Score = 66.2 bits (160), Expect = 8e-09
Identities = 30/34 (88%), Positives = 31/34 (90%)
Frame = +1
Query: 477 PDPYQKQCDDFVAEYEPLLLEILVEVMDPGFVCS 510
P P+ QCDDFVAEYEPLLLEILVEVMDPGFVCS
Sbjct: 11029 PCPFSWQCDDFVAEYEPLLLEILVEVMDPGFVCS 11130
Score = 55.1 bits (131), Expect = 2e-05
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +3
Query: 59 KSLPCDICKTVVTEAGNLLKDNATQ 83
KSLPCDICKTVVTEAGNLLKDNATQ
Sbjct: 3009 KSLPCDICKTVVTEAGNLLKDNATQ 3083
Score = 48.9 bits (115), Expect = 0.001
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +1
Query: 462 KEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKL 521
+E ++ L C+ LPDP + +C + V + P LL+I + ++P +C IG+C + +L
Sbjct: 10288 QELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPEL 10467
Query: 522 LLGTEK 527
+ E+
Sbjct: 10468 VEALEQ 10485
Score = 46.2 bits (108), Expect = 0.008
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +2
Query: 236 VSDICKNYVDQYSEVCVQMLMHM 258
VS CKNYVDQYSEVCVQMLMHM
Sbjct: 6446 VSLQCKNYVDQYSEVCVQMLMHM 6514
>ref|XM_087585.1| Homo sapiens LOC153061 (LOC153061), mRNA
Length = 994
Score = 142 bits (358), Expect = 9e-32
Identities = 61/121 (50%), Positives = 79/121 (64%)
Frame = +2
Query: 436 QKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLL 495
+ G FC CK+ + HNLE STK +IL A + GCS LP PY QC FV +YEP+L
Sbjct: 365 ENQGSFCNGCKRLLTVSSHNLESKSTKRDILVAFKGGCSILPLPYMIQCKHFVTQYEPVL 544
Query: 496 LEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHV 555
+E L ++MDP VC K+G C LLGT++C GPS+WC++ E A CNAV HC++HV
Sbjct: 545 IESLKDMMDPVAVCKKVGACHGPRTPLLGTDQCALGPSFWCRSQEAAKLCNAVQHCQKHV 724
Query: 556 W 556
W
Sbjct: 725 W 727
Score = 39.3 bits (90), Expect = 1.0
Identities = 22/76 (28%), Positives = 39/76 (50%)
Frame = +2
Query: 63 CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIK 122
C+ CK ++T + + L+ +T+ +IL + C I CK V Y PV+++ +K
Sbjct: 383 CNGCKRLLTVSSHNLESKSTKRDILVAFKGGCS-ILPLPYMIQCKHFVTQYEPVLIESLK 559
Query: 123 GEMSNPGEVCSALNLC 138
+M +P VC + C
Sbjct: 560 -DMMDPVAVCKKVGAC 604
Score = 38.9 bits (89), Expect = 1.3
Identities = 16/74 (21%), Positives = 37/74 (49%)
Frame = +2
Query: 317 CQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIH 376
C C+ ++ S + + +T+ ++ C++LP P +C+ V + P L++
Sbjct: 383 CNGCKRLLTVSSHNLESKSTKRDILVAFKGGCSILPLPYMIQCKHFVTQYEPVLIESLKD 562
Query: 377 EVNPSSLCGVIGLC 390
++P ++C +G C
Sbjct: 563 MMDPVAVCKKVGAC 604
>ref|NM_079858.1| Drosophila melanogaster Saposin-related (Sap-r), mRNA
Length = 3428
Score = 139 bits (350), Expect = 7e-31
Identities = 114/497 (22%), Positives = 218/497 (42%), Gaps = 27/497 (5%)
Frame = +2
Query: 46 KHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSAS 105
K Q+ + + +PC++C+ +V ++L N T+ E +E C+
Sbjct: 938 KQPQEALVALDAGDDIPCELCEQLVKHLRDVLVANTTETEFKQVMEGFCK--QSKGFKDE 1111
Query: 106 CKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQ-----SLQEY-------LAEQNQKQL 153
C +VD Y VI + + ++ G C + +CQ S+++ + E Q ++
Sbjct: 1112 CLSIVDQYYHVIYETLVSKLDANG-ACCMIGICQKNSASSMKDVPIMPLLPVIEPAQVKI 1288
Query: 154 ESNKIPEVDMARVVA--PFMSNIPLL--LYPQDHPRSQPQPKA---NEDVCQDCMKLVSD 206
K+ + + ++ A P S +L P DH P A ++C C ++
Sbjct: 1289 TIEKLEKHEKKQLGASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGELCTLCEYMLHF 1468
Query: 207 VQTAVKTNSSFIQGFVDHVKED-CDRLGPGVSDICKNYVDQYSEVCVQMLMHMQDQQPKE 265
+Q + T S+ + + H E+ C +L GV+ C+N+V+ Y + + +L+ Q P++
Sbjct: 1469 IQETLATPSTDDE--IKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALLV--QGLNPRD 1636
Query: 266 ICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTCQFVMN 325
+C L C K +P K V + N PA + DP C C F +
Sbjct: 1637 VCPLMQMCP--KNLPKKEDVE----VFNPQPASDEQDPPT-----------CPLCLFAVE 1765
Query: 326 KFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCG 385
+ I +N +++ + K L+ C+ LP+ + +C + V T+ L+D+ I + P +C
Sbjct: 1766 QAQMKIRDNKSKDNIKKVLNGLCSHLPNEIKEECVDFVNTYSNELIDMLITDFKPQEICV 1945
Query: 386 VIGLCAARPELVEALEQPAPAIVSALLXXXXXXXXXXXXXXXXXXXHVPPQK--NGGF-- 441
+ LC P+ AL ++ + +PPQ + GF
Sbjct: 1946 QLKLC---PKTTYALWDLRISLEDDVDGEDKSSSEEISFNDIESLEELPPQLAFDPGFTA 2116
Query: 442 ---CEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEI 498
C +C++ V LE + K+ T++ I LE+ C + P +C + +Y + ++
Sbjct: 2117 APNCLICEELVKTLEKRMGKHPTRDSIKHILEESCDRMRKPMNTKCHKVIDKYGDKIADL 2296
Query: 499 LVEVMDPGFVCSKIGVC 515
L++ MDP +C+++G+C
Sbjct: 2297 LLKEMDPKLICTELGMC 2347
Score = 117 bits (294), Expect = 2e-24
Identities = 116/537 (21%), Positives = 210/537 (38%), Gaps = 38/537 (7%)
Frame = +2
Query: 18 PVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSK---PTAKSLPCDICKTVVTEAG 74
P+ C+ G + C + + +C A +HC Q VW P C ICK +VT+A
Sbjct: 200 PLLGSSKCTWGPSYWCGNFSNSKECRATRHCIQTVWETQKVPVDTDSICTICKDMVTQAR 379
Query: 75 NLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSA 134
+ LK N T+EE+ E +C+ I + C +V D +LP +++ + +M NP +VCS
Sbjct: 380 DQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLPELVEALASQM-NPDQVCSV 556
Query: 135 LNLCQS--LQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKA 192
LC S + E Q L+ E D + L + P
Sbjct: 557 AGLCNSARIDELYKNGIQAGLDGTVQNEDDSS-------EETELAMQP------------ 679
Query: 193 NEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQY-SEVC 251
N+ C +C L+S + + K ++ V+ + C L SD C N V Y +++
Sbjct: 680 NQLSCGNC-NLLSRLMHS-KFAATDRDDMVETMLHMCGSLS-SFSDACANIVLTYFNDIY 850
Query: 252 VQMLMHMQDQQPKEICVLAGFC------NEVKRVPMKTLVPATETIKNILPALEMMDPYE 305
+ H+ +C ++G C +E ++ P + LV
Sbjct: 851 DHVSKHLTTD---AVCHVSGVCASRYHQHEEEKQPQEALV-------------------- 961
Query: 306 QNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGT 365
+ A + I C+ C+ ++ +++V N TE + + C + +C +V
Sbjct: 962 --ALDAGDDIPCELCEQLVKHLRDVLVANTTETEFKQVMEGFCK-QSKGFKDECLSIVDQ 1132
Query: 366 FGPSLLDIFIHEVNPSSLCGVIGLCAARP----------ELVEALEQPAPAIVSALLXXX 415
+ + + + +++ + C +IG+C L+ +E I L
Sbjct: 1133YYHVIYETLVSKLDANGACCMIGICQKNSASSMKDVPIMPLLPVIEPAQVKITIEKLEKH 1312
Query: 416 XXXXXXXXXXXXXXXXHVPPQ----------------KNGGFCEVCKKPVLYLEHNLEKN 459
+ Q + G C +C+ + +++ L
Sbjct: 1313EKKQLGASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGELCTLCEYMLHFIQETLATP 1492
Query: 460 STKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCP 516
ST +EI +E C+ LP QC +FV Y ++ +LV+ ++P VC + +CP
Sbjct: 1493STDDEIKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALLVQGLNPRDVCPLMQMCP 1663
Score = 61.6 bits (148), Expect = 2e-07
Identities = 72/332 (21%), Positives = 127/332 (37%), Gaps = 4/332 (1%)
Frame = +2
Query: 63 CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIK 122
C IC+ +V + + T++ I H LE++C+ + ++ C +V+D Y I D++
Sbjct: 2126 CLICEELVKTLEKRMGKHPTRDSIKHILEESCDRMR-KPMNTKCHKVIDKYGDKIADLLL 2302
Query: 123 GEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQD 182
EM +P +C+ L +C LA+ L+ ++ E V+A L QD
Sbjct: 2303 KEM-DPKLICTELGMC-----ILAD-----LDDLEVDEALKYDVIA---------LPRQD 2422
Query: 183 HPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKN 242
+ S + V + + D KT I+ ++ V C+RL V C
Sbjct: 2423 NKLSSSIKEPPTCVLCEFIMTKLDADLKNKTEQDDIKRAIEAV---CNRLPATVRKQCDT 2593
Query: 243 YVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMD 302
+VD Y+ +++L D PK++C C V
Sbjct: 2594 FVDGYASAVLKLL---SDVPPKQVCQKLQLCFSV-------------------------- 2686
Query: 303 PYEQNLVQAHNVILCQTCQFVMNKFSELI---VNNATEELLVKGLSNACALLPDPARTKC 359
V+ C C V + +N +E ++ S C LP C
Sbjct: 2687 ------AVTDEVLECGVCHGVTQALLPFLREKKDNVSEVTALQMTSVGCENLPAKYYKIC 2848
Query: 360 QEVVGTFGPSLLDIFIHE-VNPSSLCGVIGLC 390
E++ +G S+ ++ ++ S +C IG C
Sbjct: 2849 SEMISIYGSSIKNLAKRPYIDQSHICAEIGKC 2944
Score = 58.9 bits (141), Expect = 1e-06
Identities = 30/85 (35%), Positives = 41/85 (47%), Gaps = 1/85 (1%)
Frame = +2
Query: 435 PQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLP-DPYQKQCDDFVAEYEP 493
P C +CK V L+ N T+EE+ E C +P P QK+C ++ P
Sbjct: 323 PVDTDSICTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLP 502
Query: 494 LLLEILVEVMDPGFVCSKIGVCPSA 518
L+E L M+P VCS G+C SA
Sbjct: 503 ELVEALASQMNPDQVCSVAGLCNSA 577
Score = 55.5 bits (132), Expect = 1e-05
Identities = 23/49 (46%), Positives = 28/49 (56%)
Frame = +2
Query: 508 VCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHVW 556
+C GV +A LL G+ KC WGPSYWC N + C A HC + VW
Sbjct: 164 LCCAFGVFAAATPLL-GSSKCTWGPSYWCGNFSNSKECRATRHCIQTVW 307
>gb|AE003775.1|AE003775 Drosophila melanogaster genomic scaffold 142000013386035 section 100 of
105, complete sequence
Length = 236109
Score = 139 bits (350), Expect = 7e-31
Identities = 114/497 (22%), Positives = 218/497 (42%), Gaps = 27/497 (5%)
Frame = -2
Query: 46 KHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSAS 105
K Q+ + + +PC++C+ +V ++L N T+ E +E C+
Sbjct: 215525 KQPQEALVALDAGDDIPCELCEQLVKHLRDVLVANTTETEFKQVMEGFCK--QSKGFKDE 215352
Query: 106 CKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQ-----SLQEY-------LAEQNQKQL 153
C +VD Y VI + + ++ G C + +CQ S+++ + E Q ++
Sbjct: 215351 CLSIVDQYYHVIYETLVSKLDANG-ACCMIGICQKNSASSMKDVPIMPLLPVIEPAQVKI 215175
Query: 154 ESNKIPEVDMARVVA--PFMSNIPLL--LYPQDHPRSQPQPKA---NEDVCQDCMKLVSD 206
K+ + + ++ A P S +L P DH P A ++C C ++
Sbjct: 215174 TIEKLEKHEKKQLGASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGELCTLCEYMLHF 214995
Query: 207 VQTAVKTNSSFIQGFVDHVKED-CDRLGPGVSDICKNYVDQYSEVCVQMLMHMQDQQPKE 265
+Q + T S+ + + H E+ C +L GV+ C+N+V+ Y + + +L+ Q P++
Sbjct: 214994 IQETLATPSTDDE--IKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALLV--QGLNPRD 214827
Query: 266 ICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTCQFVMN 325
+C L C K +P K V + N PA + DP C C F +
Sbjct: 214826 VCPLMQMCP--KNLPKKEDVE----VFNPQPASDEQDPPT-----------CPLCLFAVE 214698
Query: 326 KFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCG 385
+ I +N +++ + K L+ C+ LP+ + +C + V T+ L+D+ I + P +C
Sbjct: 214697 QAQMKIRDNKSKDNIKKVLNGLCSHLPNEIKEECVDFVNTYSNELIDMLITDFKPQEICV 214518
Query: 386 VIGLCAARPELVEALEQPAPAIVSALLXXXXXXXXXXXXXXXXXXXHVPPQK--NGGF-- 441
+ LC P+ AL ++ + +PPQ + GF
Sbjct: 214517 QLKLC---PKTTYALWDLRISLEDDVDGEDKSSSEEISFNDIESLEELPPQLAFDPGFTA 214347
Query: 442 ---CEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEI 498
C +C++ V LE + K+ T++ I LE+ C + P +C + +Y + ++
Sbjct: 214346 APNCLICEELVKTLEKRMGKHPTRDSIKHILEESCDRMRKPMNTKCHKVIDKYGDKIADL 214167
Query: 499 LVEVMDPGFVCSKIGVC 515
L++ MDP +C+++G+C
Sbjct: 214166 LLKEMDPKLICTELGMC 214116
Score = 64.7 bits (156), Expect = 2e-08
Identities = 63/288 (21%), Positives = 116/288 (39%), Gaps = 5/288 (1%)
Frame = -2
Query: 233 GPGVSDICKNYVDQYSEVCVQMLM--HMQDQQPKEICVLAGFCNEVKRVPM-KTLVPA-- 287
GPG++D + + + +L+ M P+++C +AG CN + + K + A
Sbjct: 216023 GPGLADESRCEFSPLQHILLNLLLIYKMFPFNPQQVCSVAGLCNSARIDELYKNGIQAGL 215844
Query: 288 TETIKNILPALEMMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNA 347
T++N + E E L N + C C + +++ V+ + +
Sbjct: 215843 DGTVQNEDDSSE-----ETELAMQPNQLSCGNCNLLSRLMHSKFAATDRDDM-VETMLHM 215682
Query: 348 CALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAI 407
C L + C +V T+ + D + ++C V G+CA+R E +QP A+
Sbjct: 215681 CGSLSSFSDA-CANIVLTYFNDIYDHVSKHLTTDAVCHVSGVCASRYHQHEEEKQPQEAL 215505
Query: 408 VSALLXXXXXXXXXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILA 467
V+ +P CE+C++ V +L L N+T+ E
Sbjct: 215504 VA-----------------LDAGDDIP-------CELCEQLVKHLRDVLVANTTETEFKQ 215397
Query: 468 ALEKGCSFLPDPYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVC 515
+E C ++ +C V +Y ++ E LV +D C IG+C
Sbjct: 215396 VMEGFCK-QSKGFKDECLSIVDQYYHVIYETLVSKLDANGACCMIGIC 215256
Score = 63.5 bits (153), Expect(2) = 1e-18
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = -3
Query: 41 DCGAVKHCQQMVWSK---PTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWI 97
+C A +HC Q VW P C ICK +VT+A + LK N T+EE+ E +C+ I
Sbjct: 216268 ECRATRHCIQTVWETQKVPVDTDSICTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLI 216089
Query: 98 HDSSLSASCKEVVDSYLPVILDMIKGEMS 126
+ C +V D +LP +++ + +M+
Sbjct: 216088 PIKPIQKECIKVADDFLPELVEALASQMN 216002
Score = 55.8 bits (133), Expect(2) = 1e-18
Identities = 82/425 (19%), Positives = 154/425 (35%), Gaps = 35/425 (8%)
Frame = -2
Query: 127 NPGEVCSALNLCQS--LQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHP 184
NP +VCS LC S + E Q L+ E D + L + P
Sbjct: 215930 NPQQVCSVAGLCNSARIDELYKNGIQAGLDGTVQNEDDSS-------EETELAMQP---- 215784
Query: 185 RSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYV 244
N+ C +C L+S + + K ++ V+ + C L SD C N V
Sbjct: 215783 --------NQLSCGNC-NLLSRLMHS-KFAATDRDDMVETMLHMCGSLS-SFSDACANIV 215637
Query: 245 DQY-SEVCVQMLMHMQDQQPKEICVLAGFC------NEVKRVPMKTLVPATETIKNILPA 297
Y +++ + H+ +C ++G C +E ++ P + LV
Sbjct: 215636 LTYFNDIYDHVSKHLTTD---AVCHVSGVCASRYHQHEEEKQPQEALV------------ 215502
Query: 298 LEMMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPART 357
+ A + I C+ C+ ++ +++V N TE + + C +
Sbjct: 215501 ----------ALDAGDDIPCELCEQLVKHLRDVLVANTTETEFKQVMEGFCK-QSKGFKD 215355
Query: 358 KCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARP----------ELVEALEQPAPAI 407
+C +V + + + + +++ + C +IG+C L+ +E I
Sbjct: 215354 ECLSIVDQYYHVIYETLVSKLDANGACCMIGICQKNSASSMKDVPIMPLLPVIEPAQVKI 215175
Query: 408 VSALLXXXXXXXXXXXXXXXXXXXHVPPQ----------------KNGGFCEVCKKPVLY 451
L + Q + G C +C+ + +
Sbjct: 215174 TIEKLEKHEKKQLGASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGELCTLCEYMLHF 214995
Query: 452 LEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSK 511
++ L ST +EI +E C+ LP QC +FV Y ++ +LV+ ++P VC
Sbjct: 214994 IQETLATPSTDDEIKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALLVQGLNPRDVCPL 214815
Query: 512 IGVCP 516
+ +CP
Sbjct: 214814 MQMCP 214800
Score = 46.6 bits (109), Expect = 0.006
Identities = 23/72 (31%), Positives = 33/72 (44%), Gaps = 1/72 (1%)
Frame = -3
Query: 435 PQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLP-DPYQKQCDDFVAEYEP 493
P C +CK V L+ N T+EE+ E C +P P QK+C ++ P
Sbjct: 216214 PVDTDSICTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLP 216035
Query: 494 LLLEILVEVMDP 505
L+E L M+P
Sbjct: 216034 ELVEALASQMNP 215999
Score = 42.7 bits (99), Expect = 0.092
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = -2
Query: 507 FVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQN 538
FVC GV +A LL G+ KC WGPSYWC N
Sbjct: 218132 FVCFLAGVFAAATPLL-GSSKCTWGPSYWCGN 218040
Score = 38.9 bits (89), Expect = 1.3
Identities = 20/78 (25%), Positives = 39/78 (49%), Gaps = 1/78 (1%)
Frame = -3
Query: 304 YEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLP-DPARTKCQEV 362
+E V +C C+ ++ + + + +N TEE L + +C L+P P + +C +V
Sbjct: 216232 WETQKVPVDTDSICTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKV 216053
Query: 363 VGTFGPSLLDIFIHEVNP 380
F P L++ ++NP
Sbjct: 216052 ADDFLPELVEALASQMNP 215999
>gb|AF145647.1|AF145647 Drosophila melanogaster clone GH08312 BcDNA.GH08312 (BcDNA.GH08312)
mRNA, complete cds
Length = 3448
Score = 139 bits (350), Expect = 7e-31
Identities = 114/497 (22%), Positives = 218/497 (42%), Gaps = 27/497 (5%)
Frame = +1
Query: 46 KHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSAS 105
K Q+ + + +PC++C+ +V ++L N T+ E +E C+
Sbjct: 925 KQPQEALVALDAGDDIPCELCEQLVKHLRDVLVANTTETEFKQVMEGFCK--QSKGFKDE 1098
Query: 106 CKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQ-----SLQEY-------LAEQNQKQL 153
C +VD Y VI + + ++ G C + +CQ S+++ + E Q ++
Sbjct: 1099 CLSIVDQYYHVIYETLVSKLDANG-ACCMIGICQKNSASSMKDVPIMPLLPVIEPAQVKI 1275
Query: 154 ESNKIPEVDMARVVA--PFMSNIPLL--LYPQDHPRSQPQPKA---NEDVCQDCMKLVSD 206
K+ + + ++ A P S +L P DH P A ++C C ++
Sbjct: 1276 TIEKLEKHEKKQLGASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGELCTLCEYMLHF 1455
Query: 207 VQTAVKTNSSFIQGFVDHVKED-CDRLGPGVSDICKNYVDQYSEVCVQMLMHMQDQQPKE 265
+Q + T S+ + + H E+ C +L GV+ C+N+V+ Y + + +L+ Q P++
Sbjct: 1456 IQETLATPSTDDE--IKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALLV--QGLNPRD 1623
Query: 266 ICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTCQFVMN 325
+C L C K +P K V + N PA + DP C C F +
Sbjct: 1624 VCPLMQMCP--KNLPKKEDVE----VFNPQPASDEQDPPT-----------CPLCLFAVE 1752
Query: 326 KFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCG 385
+ I +N +++ + K L+ C+ LP+ + +C + V T+ L+D+ I + P +C
Sbjct: 1753 QAQMKIRDNKSKDNIKKVLNGLCSHLPNEIKEECVDFVNTYSNELIDMLITDFKPQEICV 1932
Query: 386 VIGLCAARPELVEALEQPAPAIVSALLXXXXXXXXXXXXXXXXXXXHVPPQK--NGGF-- 441
+ LC P+ AL ++ + +PPQ + GF
Sbjct: 1933 QLKLC---PKTTYALWDLRISLEDDVDGEDKSSSEEISFNDIESLEELPPQLAFDPGFTA 2103
Query: 442 ---CEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEI 498
C +C++ V LE + K+ T++ I LE+ C + P +C + +Y + ++
Sbjct: 2104 APNCLICEELVKTLEKRMGKHPTRDSIKHILEESCDRMRKPMNTKCHKVIDKYGDKIADL 2283
Query: 499 LVEVMDPGFVCSKIGVC 515
L++ MDP +C+++G+C
Sbjct: 2284 LLKEMDPKLICTELGMC 2334
Score = 117 bits (294), Expect = 2e-24
Identities = 116/537 (21%), Positives = 210/537 (38%), Gaps = 38/537 (7%)
Frame = +1
Query: 18 PVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSK---PTAKSLPCDICKTVVTEAG 74
P+ C+ G + C + + +C A +HC Q VW P C ICK +VT+A
Sbjct: 187 PLLGSSKCTWGPSYWCGNFSNSKECRATRHCIQTVWETQKVPVDTDSICTICKDMVTQAR 366
Query: 75 NLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSA 134
+ LK N T+EE+ E +C+ I + C +V D +LP +++ + +M NP +VCS
Sbjct: 367 DQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLPELVEALASQM-NPDQVCSV 543
Query: 135 LNLCQS--LQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKA 192
LC S + E Q L+ E D + L + P
Sbjct: 544 AGLCNSARIDELYKNGIQAGLDGTVQNEDDSS-------EETELAMQP------------ 666
Query: 193 NEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQY-SEVC 251
N+ C +C L+S + + K ++ V+ + C L SD C N V Y +++
Sbjct: 667 NQLSCGNC-NLLSRLMHS-KFAATDRDDMVETMLHMCGSLS-SFSDACANIVLTYFNDIY 837
Query: 252 VQMLMHMQDQQPKEICVLAGFC------NEVKRVPMKTLVPATETIKNILPALEMMDPYE 305
+ H+ +C ++G C +E ++ P + LV
Sbjct: 838 DHVSKHLTTD---AVCHVSGVCASRYHQHEEEKQPQEALV-------------------- 948
Query: 306 QNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGT 365
+ A + I C+ C+ ++ +++V N TE + + C + +C +V
Sbjct: 949 --ALDAGDDIPCELCEQLVKHLRDVLVANTTETEFKQVMEGFCK-QSKGFKDECLSIVDQ 1119
Query: 366 FGPSLLDIFIHEVNPSSLCGVIGLCAARP----------ELVEALEQPAPAIVSALLXXX 415
+ + + + +++ + C +IG+C L+ +E I L
Sbjct: 1120YYHVIYETLVSKLDANGACCMIGICQKNSASSMKDVPIMPLLPVIEPAQVKITIEKLEKH 1299
Query: 416 XXXXXXXXXXXXXXXXHVPPQ----------------KNGGFCEVCKKPVLYLEHNLEKN 459
+ Q + G C +C+ + +++ L
Sbjct: 1300EKKQLGASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGELCTLCEYMLHFIQETLATP 1479
Query: 460 STKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCP 516
ST +EI +E C+ LP QC +FV Y ++ +LV+ ++P VC + +CP
Sbjct: 1480STDDEIKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALLVQGLNPRDVCPLMQMCP 1650
Score = 61.6 bits (148), Expect = 2e-07
Identities = 72/332 (21%), Positives = 127/332 (37%), Gaps = 4/332 (1%)
Frame = +1
Query: 63 CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIK 122
C IC+ +V + + T++ I H LE++C+ + ++ C +V+D Y I D++
Sbjct: 2113 CLICEELVKTLEKRMGKHPTRDSIKHILEESCDRMR-KPMNTKCHKVIDKYGDKIADLLL 2289
Query: 123 GEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQD 182
EM +P +C+ L +C LA+ L+ ++ E V+A L QD
Sbjct: 2290 KEM-DPKLICTELGMC-----ILAD-----LDDLEVDEALKYDVIA---------LPRQD 2409
Query: 183 HPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKN 242
+ S + V + + D KT I+ ++ V C+RL V C
Sbjct: 2410 NKLSSSIKEPPTCVLCEFIMTKLDADLKNKTEQDDIKRAIEAV---CNRLPATVRKQCDT 2580
Query: 243 YVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMD 302
+VD Y+ +++L D PK++C C V
Sbjct: 2581 FVDGYASAVLKLL---SDVPPKQVCQKLQLCFSV-------------------------- 2673
Query: 303 PYEQNLVQAHNVILCQTCQFVMNKFSELI---VNNATEELLVKGLSNACALLPDPARTKC 359
V+ C C V + +N +E ++ S C LP C
Sbjct: 2674 ------AVTDEVLECGVCHGVTQALLPFLREKKDNVSEVTALQMTSVGCENLPAKYYKIC 2835
Query: 360 QEVVGTFGPSLLDIFIHE-VNPSSLCGVIGLC 390
E++ +G S+ ++ ++ S +C IG C
Sbjct: 2836 SEMISIYGSSIKNLAKRPYIDQSHICAEIGKC 2931
Score = 58.9 bits (141), Expect = 1e-06
Identities = 30/85 (35%), Positives = 41/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 435 PQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLP-DPYQKQCDDFVAEYEP 493
P C +CK V L+ N T+EE+ E C +P P QK+C ++ P
Sbjct: 310 PVDTDSICTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLP 489
Query: 494 LLLEILVEVMDPGFVCSKIGVCPSA 518
L+E L M+P VCS G+C SA
Sbjct: 490 ELVEALASQMNPDQVCSVAGLCNSA 564
Score = 55.5 bits (132), Expect = 1e-05
Identities = 23/49 (46%), Positives = 28/49 (56%)
Frame = +1
Query: 508 VCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHVW 556
+C GV +A LL G+ KC WGPSYWC N + C A HC + VW
Sbjct: 151 LCCAFGVFAAATPLL-GSSKCTWGPSYWCGNFSNSKECRATRHCIQTVW 294
>gb|AC008219.4|AC008219 Drosophila melanogaster, chromosome 3R, region 100A-100A, BAC clone
BACR03C06, complete sequence
Length = 156335
Score = 139 bits (350), Expect = 7e-31
Identities = 114/497 (22%), Positives = 218/497 (42%), Gaps = 27/497 (5%)
Frame = -1
Query: 46 KHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSAS 105
K Q+ + + +PC++C+ +V ++L N T+ E +E C+
Sbjct: 38558 KQPQEALVALDAGDDIPCELCEQLVKHLRDVLVANTTETEFKQVMEGFCK--QSKGFKDE 38385
Query: 106 CKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQ-----SLQEY-------LAEQNQKQL 153
C +VD Y VI + + ++ G C + +CQ S+++ + E Q ++
Sbjct: 38384 CLSIVDQYYHVIYETLVSKLDANG-ACCMIGICQKNSASSMKDVPIMPLLPVIEPAQVKI 38208
Query: 154 ESNKIPEVDMARVVA--PFMSNIPLL--LYPQDHPRSQPQPKA---NEDVCQDCMKLVSD 206
K+ + + ++ A P S +L P DH P A ++C C ++
Sbjct: 38207 TIEKLEKHEKKQLGASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGELCTLCEYMLHF 38028
Query: 207 VQTAVKTNSSFIQGFVDHVKED-CDRLGPGVSDICKNYVDQYSEVCVQMLMHMQDQQPKE 265
+Q + T S+ + + H E+ C +L GV+ C+N+V+ Y + + +L+ Q P++
Sbjct: 38027 IQETLATPSTDDE--IKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALLV--QGLNPRD 37860
Query: 266 ICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTCQFVMN 325
+C L C K +P K V + N PA + DP C C F +
Sbjct: 37859 VCPLMQMCP--KNLPKKEDVE----VFNPQPASDEQDPPT-----------CPLCLFAVE 37731
Query: 326 KFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCG 385
+ I +N +++ + K L+ C+ LP+ + +C + V T+ L+D+ I + P +C
Sbjct: 37730 QAQMKIRDNKSKDNIKKVLNGLCSHLPNEIKEECVDFVNTYSNELIDMLITDFKPQEICV 37551
Query: 386 VIGLCAARPELVEALEQPAPAIVSALLXXXXXXXXXXXXXXXXXXXHVPPQK--NGGF-- 441
+ LC P+ AL ++ + +PPQ + GF
Sbjct: 37550 QLKLC---PKTTYALWDLRISLEDDVDGEDKSSSEEISFNDIESLEELPPQLAFDPGFTA 37380
Query: 442 ---CEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEI 498
C +C++ V LE + K+ T++ I LE+ C + P +C + +Y + ++
Sbjct: 37379 APNCLICEELVKTLEKRMGKHPTRDSIKHILEESCDRMRKPMNTKCHKVIDKYGDKIADL 37200
Query: 499 LVEVMDPGFVCSKIGVC 515
L++ MDP +C+++G+C
Sbjct: 37199 LLKEMDPKLICTELGMC 37149
Score = 64.7 bits (156), Expect = 2e-08
Identities = 63/288 (21%), Positives = 116/288 (39%), Gaps = 5/288 (1%)
Frame = -1
Query: 233 GPGVSDICKNYVDQYSEVCVQMLM--HMQDQQPKEICVLAGFCNEVKRVPM-KTLVPA-- 287
GPG++D + + + +L+ M P+++C +AG CN + + K + A
Sbjct: 39056 GPGLADESRCEFSPLQHILLNLLLIYKMFPFNPQQVCSVAGLCNSARIDELYKNGIQAGL 38877
Query: 288 TETIKNILPALEMMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNA 347
T++N + E E L N + C C + +++ V+ + +
Sbjct: 38876 DGTVQNEDDSSE-----ETELAMQPNQLSCGNCNLLSRLMHSKFAATDRDDM-VETMLHM 38715
Query: 348 CALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAI 407
C L + C +V T+ + D + ++C V G+CA+R E +QP A+
Sbjct: 38714 CGSLSSFSDA-CANIVLTYFNDIYDHVSKHLTTDAVCHVSGVCASRYHQHEEEKQPQEAL 38538
Query: 408 VSALLXXXXXXXXXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILA 467
V+ +P CE+C++ V +L L N+T+ E
Sbjct: 38537 VA-----------------LDAGDDIP-------CELCEQLVKHLRDVLVANTTETEFKQ 38430
Query: 468 ALEKGCSFLPDPYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVC 515
+E C ++ +C V +Y ++ E LV +D C IG+C
Sbjct: 38429 VMEGFCK-QSKGFKDECLSIVDQYYHVIYETLVSKLDANGACCMIGIC 38289
Score = 63.5 bits (153), Expect(2) = 1e-18
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = -2
Query: 41 DCGAVKHCQQMVWSK---PTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWI 97
+C A +HC Q VW P C ICK +VT+A + LK N T+EE+ E +C+ I
Sbjct: 39301 ECRATRHCIQTVWETQKVPVDTDSICTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLI 39122
Query: 98 HDSSLSASCKEVVDSYLPVILDMIKGEMS 126
+ C +V D +LP +++ + +M+
Sbjct: 39121 PIKPIQKECIKVADDFLPELVEALASQMN 39035
Score = 55.8 bits (133), Expect(2) = 1e-18
Identities = 82/425 (19%), Positives = 154/425 (35%), Gaps = 35/425 (8%)
Frame = -1
Query: 127 NPGEVCSALNLCQS--LQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHP 184
NP +VCS LC S + E Q L+ E D + L + P
Sbjct: 38963 NPQQVCSVAGLCNSARIDELYKNGIQAGLDGTVQNEDDSS-------EETELAMQP---- 38817
Query: 185 RSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYV 244
N+ C +C L+S + + K ++ V+ + C L SD C N V
Sbjct: 38816 --------NQLSCGNC-NLLSRLMHS-KFAATDRDDMVETMLHMCGSLS-SFSDACANIV 38670
Query: 245 DQY-SEVCVQMLMHMQDQQPKEICVLAGFC------NEVKRVPMKTLVPATETIKNILPA 297
Y +++ + H+ +C ++G C +E ++ P + LV
Sbjct: 38669 LTYFNDIYDHVSKHLTTD---AVCHVSGVCASRYHQHEEEKQPQEALV------------ 38535
Query: 298 LEMMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPART 357
+ A + I C+ C+ ++ +++V N TE + + C +
Sbjct: 38534 ----------ALDAGDDIPCELCEQLVKHLRDVLVANTTETEFKQVMEGFCK-QSKGFKD 38388
Query: 358 KCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARP----------ELVEALEQPAPAI 407
+C +V + + + + +++ + C +IG+C L+ +E I
Sbjct: 38387 ECLSIVDQYYHVIYETLVSKLDANGACCMIGICQKNSASSMKDVPIMPLLPVIEPAQVKI 38208
Query: 408 VSALLXXXXXXXXXXXXXXXXXXXHVPPQ----------------KNGGFCEVCKKPVLY 451
L + Q + G C +C+ + +
Sbjct: 38207 TIEKLEKHEKKQLGASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGELCTLCEYMLHF 38028
Query: 452 LEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSK 511
++ L ST +EI +E C+ LP QC +FV Y ++ +LV+ ++P VC
Sbjct: 38027 IQETLATPSTDDEIKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALLVQGLNPRDVCPL 37848
Query: 512 IGVCP 516
+ +CP
Sbjct: 37847 MQMCP 37833
Score = 46.6 bits (109), Expect = 0.006
Identities = 23/72 (31%), Positives = 33/72 (44%), Gaps = 1/72 (1%)
Frame = -2
Query: 435 PQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLP-DPYQKQCDDFVAEYEP 493
P C +CK V L+ N T+EE+ E C +P P QK+C ++ P
Sbjct: 39247 PVDTDSICTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLP 39068
Query: 494 LLLEILVEVMDP 505
L+E L M+P
Sbjct: 39067 ELVEALASQMNP 39032
Score = 42.7 bits (99), Expect = 0.092
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = -1
Query: 507 FVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQN 538
FVC GV +A LL G+ KC WGPSYWC N
Sbjct: 41165 FVCFLAGVFAAATPLL-GSSKCTWGPSYWCGN 41073
Score = 38.9 bits (89), Expect = 1.3
Identities = 20/78 (25%), Positives = 39/78 (49%), Gaps = 1/78 (1%)
Frame = -2
Query: 304 YEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLP-DPARTKCQEV 362
+E V +C C+ ++ + + + +N TEE L + +C L+P P + +C +V
Sbjct: 39265 WETQKVPVDTDSICTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKV 39086
Query: 363 VGTFGPSLLDIFIHEVNP 380
F P L++ ++NP
Sbjct: 39085 ADDFLPELVEALASQMNP 39032
>dbj|AB008449.1|AB008449 Bombyx mori mRNA for BmP109, complete cds
Length = 3648
Score = 136 bits (342), Expect = 6e-30
Identities = 113/521 (21%), Positives = 209/521 (39%), Gaps = 24/521 (4%)
Frame = +2
Query: 25 CSGGSAVLCRDVKTAVDCGAVKHCQQMVWSK---PTAKSLPCDICKTVVTEAGNLLKDNA 81
C+ G + C + T +C A HC VWSK P C IC +V +A + L+ N
Sbjct: 653 CTWGPSYWCSNFSTGRECNATPHCINRVWSKMTFPEDNDNICQICLDMVKQARDQLQSNE 832
Query: 82 TQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQS- 140
TQ+EI E +C+ I ++ C ++ D ++ +++ + EM NP VCS LC +
Sbjct: 833 TQDEIKEVFEGSCKLIPIKFVAEGCMKLADEFVVELIETLASEM-NPQAVCSVAGLCNNA 1009
Query: 141 -LQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDVCQ 198
+ L + N Q++L + C
Sbjct: 1010 KIDRLLVDYNAQRELRAG----------------------------------------CY 1069
Query: 199 DCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLMHM 258
+C K V V+ K + + + F+ + + C + +SD C + +Y E ++ +
Sbjct: 1070 NCQKTVGVVRK--KFDETKYEDFLVGLLQVCRNMD-SLSDSCSMLIFKYYENILEAVK-- 1234
Query: 259 QDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQ 318
+D P+ IC ++G C+ + P E M Y A + + C+
Sbjct: 1235 KDLNPEGICHVSGQCSYKFHNHDEFTFP------------EQMVQYS-----ATDDVPCE 1363
Query: 319 TCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEV 378
C+ ++ +++V N TE K L C + +C + + P + + + ++
Sbjct: 1364 FCEQLVKHLRDVLVANTTELEFYKVLQGLCKQT-GKFKDECLHLAEQYYPVIYNFLVSDL 1540
Query: 379 NPSSLCGVIGLCA------------------ARPELVEALEQPAPAIVSALLXXXXXXXX 420
P+ C +IG+C +P+L+ A E I L
Sbjct: 1541 KPAETCKMIGICGNLTSAPISPLVARELVVKVQPKLIGAEESK---IARVPLAKQMEPAS 1711
Query: 421 XXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPY 480
V ++ C C+ + YL+ L T++++ AA+++ C LPD
Sbjct: 1712 AAVSVLPLERMFVAAPQSKAACAFCQYFLHYLQVQLSDTRTEDKVKAAVQEACDALPDAL 1891
Query: 481 QKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKL 521
+C +FV +Y ++ +LV+ +DP VC + +CP ++
Sbjct: 1892 NGECKEFVTQYGSAVIALLVQEIDPASVCPALQICPQTEEI 2014
Score = 127 bits (320), Expect = 2e-27
Identities = 109/513 (21%), Positives = 206/513 (39%), Gaps = 40/513 (7%)
Frame = +2
Query: 49 QQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKE 108
+QMV T +PC+ C+ +V ++L N T+ E L+ C+ C
Sbjct: 1319 EQMVQYSAT-DDVPCEFCEQLVKHLRDVLVANTTELEFYKVLQGLCK--QTGKFKDECLH 1489
Query: 109 VVDSYLPVILDMIKGEMSNPGEVCSALNLCQSL----------QEYLAEQNQKQL--ESN 156
+ + Y PVI + + ++ P E C + +C +L +E + + K + E +
Sbjct: 1490 LAEQYYPVIYNFLVSDLK-PAETCKMIGICGNLTSAPISPLVARELVVKVQPKLIGAEES 1666
Query: 157 KIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDVCQDCMKLV----SDVQTAVK 212
KI V +A+ + P + + +L + + PQ KA CQ + + SD +T K
Sbjct: 1667 KIARVPLAKQMEPASAAVSVLPLERMFVAA-PQSKAACAFCQYFLHYLQVQLSDTRTEDK 1843
Query: 213 TNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGF 272
++ V+E CD L ++ CK +V QY + +L+ Q+ P +C
Sbjct: 1844 VKAA--------VQEACDALPDALNGECKEFVTQYGSAVIALLV--QEIDPASVC----- 1978
Query: 273 CNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTCQFVMNKFSELIV 332
P + P TE I+ + E + C C F + + ++
Sbjct: 1979 -------PALQICPQTEEIRRVDVNSEKSN--------------CPLCLFAVEQLESVLK 2095
Query: 333 NNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAA 392
NN +EE + K L C L +++C + V T+ L+++ + ++N +C + LC
Sbjct: 2096 NNRSEENIRKALDGLCTRLSQKLQSECIDFVDTYSSQLVEMLVADMNAKEICVFLKLC-- 2269
Query: 393 RPELVEALEQPAPAIVS-----------------------ALLXXXXXXXXXXXXXXXXX 429
R +L + L+ +I L+
Sbjct: 2270 RDQLHDPLKLTHSSIDKFHAKPTLRGDRNNHRKKSLLPKHMLVSEFSDVETNEILDDTVN 2449
Query: 430 XXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVA 489
V + C +C+ + ++ ++ +EI A+ C +P +CD FV
Sbjct: 2450 GRRVSHKSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAVHGICKHMPKSVSAECDQFVE 2629
Query: 490 EYEPLLLEILVEVMDPGFVCSKIGVC-PSAYKL 521
+Y L++ +L + +DP VC ++ +C P + K+
Sbjct: 2630 KYADLVISLLAQELDPSEVCEELKLCKPESLKI 2728
Score = 105 bits (262), Expect = 1e-20
Identities = 108/517 (20%), Positives = 203/517 (38%), Gaps = 33/517 (6%)
Frame = +2
Query: 32 LCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLE 91
L + ++ A +V ++M + P +K+ C C+ + L D T++++ ++
Sbjct: 1685 LAKQMEPASAAVSVLPLERMFVAAPQSKAA-CAFCQYFLHYLQVQLSDTRTEDKVKAAVQ 1861
Query: 92 KTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQEYLAEQNQK 151
+ C+ + D+ L+ CKE V Y ++ ++ E+ +P VC AL +C +E
Sbjct: 1862 EACDALPDA-LNGECKEFVTQYGSAVIALLVQEI-DPASVCPALQICPQTEE-------- 2011
Query: 152 QLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDVCQDCMKLVSDVQTAV 211
I VD V SN PL C+ V +++ +
Sbjct: 2012 ------IRRVD----VNSEKSNCPL-----------------------CLFAVEQLESVL 2092
Query: 212 KTNSSF--IQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLMHMQDQQPKEICVL 269
K N S I+ +D + C RL + C ++VD YS V+ML+ D KEICV
Sbjct: 2093 KNNRSEENIRKALDGL---CTRLSQKLQSECIDFVDTYSSQLVEMLV--ADMNAKEICVF 2257
Query: 270 AGFCNEVKRVPMKTLVPATETI---------------KNILPALEMMDPYEQNLVQAHNV 314
C + P+K + + K++LP ++ + V+ + +
Sbjct: 2258 LKLCRDQLHDPLKLTHSSIDKFHAKPTLRGDRNNHRKKSLLPKHMLVSEFSD--VETNEI 2431
Query: 315 I----------------LCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTK 358
+ +C C+FV+ + + I + ++ + K + C +P +
Sbjct: 2432 LDDTVNGRRVSHKSQSNVCVLCEFVLKEIDDQIKDKHNDDEIKKAVHGICKHMPKSVSAE 2611
Query: 359 CQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXX 418
C + V + ++ + E++PS +C + LC +PE ++ + I +L
Sbjct: 2612 CDQFVEKYADLVISLLAQELDPSEVCEELKLC--KPESLKINK-----IKKDILD----- 2755
Query: 419 XXXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPD 478
C VC+ V+ ++ L+ I+ +EK C LP
Sbjct: 2756 -----------------------CAVCETVVMAVKKVLKNEKLDRNIVHIIEKSCGLLPA 2866
Query: 479 PYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVC 515
Y QC + Y ++ ++ E G VC +IG C
Sbjct: 2867 KYNAQCYAMLEVYGESIIHLIEEFGAKG-VCQRIGFC 2974
Score = 88.2 bits (217), Expect = 2e-15
Identities = 107/517 (20%), Positives = 193/517 (36%), Gaps = 21/517 (4%)
Frame = +2
Query: 20 QDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNL--L 77
Q PK R +K +CGAV HC VW K +I V L +
Sbjct: 200 QVPKNVLRDHKYGARVLKRGAECGAVGHCTATVWEKQKPDVSDNEISSKFVKLFRGLKDV 379
Query: 78 KDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNL 137
KD +E + +E C I +++ CK+ + I ++K S +C + +
Sbjct: 380 KDLINEEYLAASIESACHDIQYPAIAKICKDNTAHFENYIHHVLKSNTS-AETMCKIVGM 556
Query: 138 CQSLQ-EYLAEQNQKQLESNKIPEVDMARVVAP---------FMSNIPLLLYPQDHPR-- 185
C +++ + + N+K S +P +++ + SN P
Sbjct: 557 CNNMKLDNIISLNKK---STNVPVKHKDQLLGKSRCTWGPSYWCSNFSTGRECNATPHCI 727
Query: 186 -----SQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGP--GVSD 238
P+ N+++CQ C+ +V + +++N + Q + V E +L P V++
Sbjct: 728 NRVWSKMTFPEDNDNICQICLDMVKQARDQLQSNET--QDEIKEVFEGSCKLIPIKFVAE 901
Query: 239 ICKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPAL 298
C D++ ++ L + P+ +C +AG CN K I +L
Sbjct: 902 GCMKLADEFVVELIETL--ASEMNPQAVCSVAGLCNNAK-------------IDRLL--- 1027
Query: 299 EMMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTK 358
+D Q ++A C CQ + + E+ LV GL C + D
Sbjct: 1028--VDYNAQRELRAG----CYNCQKTVGVVRKKFDETKYEDFLV-GLLQVCRNM-DSLSDS 1183
Query: 359 CQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXX 418
C ++ + ++L+ ++NP +C V G C+ + + P +
Sbjct: 1184CSMLIFKYYENILEAVKKDLNPEGICHVSGQCSYKFHNHDEFTFPEQMV----------- 1330
Query: 419 XXXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPD 478
VP CE C++ V +L L N+T+ E L+ C
Sbjct: 1331-------QYSATDDVP-------CEFCEQLVKHLRDVLVANTTELEFYKVLQGLCK-QTG 1465
Query: 479 PYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVC 515
++ +C +Y P++ LV + P C IG+C
Sbjct: 1466KFKDECLHLAEQYYPVIYNFLVSDLKPAETCKMIGIC 1576
Score = 67.4 bits (163), Expect = 3e-09
Identities = 40/121 (33%), Positives = 52/121 (42%), Gaps = 21/121 (17%)
Frame = +2
Query: 458 KNSTKEEILAA-LEKGCSFLPDP-YQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVC 515
K+ EE LAA +E C + P K C D A +E + +L +C +G+C
Sbjct: 380 KDLINEEYLAASIESACHDIQYPAIAKICKDNTAHFENYIHHVLKSNTSAETMCKIVGMC 559
Query: 516 ------------------PSAYK-LLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHVW 556
P +K LLG +C WGPSYWC N T CNA HC VW
Sbjct: 560 NNMKLDNIISLNKKSTNVPVKHKDQLLGKSRCTWGPSYWCSNFSTGRECNATPHCINRVW 739
Query: 557 N 557
+
Sbjct: 740 S 742
Score = 42.4 bits (98), Expect = 0.12
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = +2
Query: 30 AVLCRDVKTAVDCGAVKHC--QQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATQEEIL 87
++L +++ + C +K C + + +K L C +C+TVV +LK+ I+
Sbjct: 2651 SLLAQELDPSEVCEELKLCKPESLKINKIKKDILDCAVCETVVMAVKKVLKNEKLDRNIV 2830
Query: 88 HYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLC 138
H +EK+C + + +A C +++ Y I+ +I+ E G VC + C
Sbjct: 2831 HIIEKSCGLL-PAKYNAQCYAMLEVYGESIIHLIE-EFGAKG-VCQRIGFC 2974
>gb|AF162129.1|AF162129 Drosophila melanogaster ecdysone dependent glycoprotein (P110)
mRNA, partial cds
Length = 1673
Score = 120 bits (300), Expect = 5e-25
Identities = 108/497 (21%), Positives = 209/497 (41%), Gaps = 27/497 (5%)
Frame = +3
Query: 46 KHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSAS 105
K Q+ + + +PC++C+ +V ++L N T+ E +E C+
Sbjct: 135 KQPQEALVALDAGDDIPCELCEQLVKHLRDVLVANTTETEFKQVMEGFCK--QSKGFKDE 308
Query: 106 CKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQ-----SLQEY-------LAEQNQKQL 153
C +VD Y VI + + ++ G C + +CQ S+++ + E Q ++
Sbjct: 309 CLSIVDQYYHVIYETLVSKLDANG-ACCMIGICQKNSASSMKDVPIMPLLPVIEPAQVKI 485
Query: 154 ESNKIPEVDMARVVA--PFMSNIPLL--LYPQDHPRSQPQPKA---NEDVCQDCMKLVSD 206
K+ + + ++ A P S +L P DH P A ++C C ++
Sbjct: 486 TIEKLEKHEKKQLGASEPKFSQQEILDMQLPIDHLMGAANPGALVEGGELCTLCEYMLHF 665
Query: 207 VQTAVKTNSSFIQGFVDHVKED-CDRLGPGVSDICKNYVDQYSEVCVQMLMHMQDQQPKE 265
+Q + T S+ + H E+ C +L GV+ C+N+V+ Y + + +L +Q P++
Sbjct: 666 IQETLATPST--DDEIKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALL--VQGLNPRD 833
Query: 266 ICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTCQFVMN 325
+C L C K +P K V + N PA + DP C C F +
Sbjct: 834 VCPLMQMC--PKNLPKKEDV----EVFNPQPASDEQDP-----------PTCPLCLFAVE 962
Query: 326 KFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCG 385
+ I +N +++ + K L+ C+ LP+ + +C + V T+ L+D+ I + P +C
Sbjct: 963 QAQMKIRDNKSKDNIKKVLNGLCSHLPNEIKEECVDFVNTYSNELIDMLITDFKPQEICV 1142
Query: 386 VIGLCAARPELVEALEQPAPAIVSALLXXXXXXXXXXXXXXXXXXXHVPPQ----KNGGF 441
+ LC P+ AL ++ + +PPQ ++
Sbjct: 1143QLKLC---PKTTYALWDLRISLEDDVDGEHKSSSEEISFNDIESLEELPPQLPSTQDSPL 1313
Query: 442 CEVCKKPVLYLEHNLE---KNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEI 498
+L E + T++ I LE+ C + P +C + +Y + ++
Sbjct: 1314LRTA*SARSWLRPWREAYGQAPTRDSIKHILEESCDPMRKPMNTKCHKVIDKYGDKIADL 1493
Query: 499 LVEVMDPGFVCSKIGVC 515
L++ MDP +C+++G+C
Sbjct: 1494LLKEMDPKLICTELGMC 1544
Score = 96.7 bits (239), Expect = 5e-18
Identities = 87/384 (22%), Positives = 153/384 (39%), Gaps = 46/384 (11%)
Frame = +3
Query: 179 YPQDHPRSQPQPK-----ANEDV----CQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDC 229
Y Q QPQ A +D+ C+ +K + DV A T + F Q V E
Sbjct: 114 YHQHEEEKQPQEALVALDAGDDIPCELCEQLVKHLRDVLVANTTETEFKQ-----VMEGF 278
Query: 230 DRLGPGVSDICKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNE-----VKRVPMKTL 284
+ G D C + VDQY V + L+ D C + G C + +K VP+ L
Sbjct: 279 CKQSKGFKDECLSIVDQYYHVIYETLVSKLDANGA--CCMIGICQKNSASSMKDVPIMPL 452
Query: 285 VPATETIKNILPALEMMDPYEQ-----------------------NLVQAHNV------- 314
+P E + + +E ++ +E+ +L+ A N
Sbjct: 453 LPVIEPAQ-VKITIEKLEKHEKKQLGASEPKFSQQEILDMQLPIDHLMGAANPGALVEGG 629
Query: 315 ILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIF 374
LC C+++++ E + +T++ + + N CA LP +C+ V +G +++ +
Sbjct: 630 ELCTLCEYMLHFIQETLATPSTDDEIKHTVENICAKLPSGVAGQCRNFVEMYGDAVIALL 809
Query: 375 IHEVNPSSLCGVIGLCAARPELVEALE--QPAPAIVSALLXXXXXXXXXXXXXXXXXXXH 432
+ +NP +C ++ +C E +E P PA
Sbjct: 810 VQGLNPRDVCPLMQMCPKNLPKKEDVEVFNPQPA----------------------SDEQ 923
Query: 433 VPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYE 492
PP C +C V + + N +K+ I L CS LP+ +++C DFV Y
Sbjct: 924 DPPT-----CPLCLFAVEQAQMKIRDNKSKDNIKKVLNGLCSHLPNEIKEECVDFVNTYS 1088
Query: 493 PLLLEILVEVMDPGFVCSKIGVCP 516
L+++L+ P +C ++ +CP
Sbjct: 1089NELIDMLITDFKPQEICVQLKLCP 1160
>gb|M86181.1|HUMPSAPA Human prosaposin (PSAP) gene
Length = 19985
Score = 115 bits (287), Expect = 1e-23
Identities = 56/77 (72%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Frame = +1
Query: 119 DMIKGEMSNPGEVCSALNLCQSLQEYLAEQN-QKQLESNKIPEVDMARVVAPFMSNIPLL 177
D S PGEVCSALNLC+SLQ++LAE N QKQLESNKIPE+DM VVAPFM+NIPLL
Sbjct: 7183 DFFPSHQSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIPELDMTEVVAPFMANIPLL 7362
Query: 178 LYPQDHPRSQPQPKANE 194
LYPQD PRS+PQPK +
Sbjct: 7363 LYPQDGPRSKPQPKVRQ 7413
Score = 92.4 bits (228), Expect(2) = 1e-24
Identities = 43/52 (82%), Positives = 46/52 (87%)
Frame = +2
Query: 432 HVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQ 483
HV K+GGFCEVCKK V YL+ NLEKNSTK+EILAALEKGCSFLPDPYQKQ
Sbjct: 16646 HVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQ 16801
Score = 80.1 bits (196), Expect = 5e-13
Identities = 32/47 (68%), Positives = 44/47 (93%)
Frame = +1
Query: 193 NEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDI 239
N DVCQDC+++V+D+QTAV+TNS+F+Q V+HVKE+CDRLGPG++DI
Sbjct: 8125 NGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADI 8265
Score = 75.1 bits (183), Expect = 2e-11
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = +1
Query: 511 KIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCN 546
KIG CPSA+K LLGTEKC+WGPSYWCQN ETAA+CN
Sbjct: 17542 KIGACPSAHKPLLGTEKCIWGPSYWCQNTETAAQCN 17649
Score = 75.1 bits (183), Expect = 2e-11
Identities = 34/47 (72%), Positives = 41/47 (86%)
Frame = +1
Query: 84 EEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGE 130
EEIL YLEKTC+W+ ++SASCKE+VDSYLPVILD+IKGEM + GE
Sbjct: 5032 EEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEMVSDGE 5172
Score = 70.9 bits (172), Expect = 3e-10
Identities = 39/99 (39%), Positives = 58/99 (58%)
Frame = +2
Query: 245 DQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPY 304
+Q++ C +++ QQPKEIC L GFC+EVK +PM+TLVPA KN++PALE+++P
Sbjct: 14210 EQWA*ACC*LVVLCSLQQPKEICALVGFCDEVKEMPMQTLVPAKVASKNVIPALELVEP- 14386
Query: 305 EQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKG 343
++ V LC M +S L + E L+ G
Sbjct: 14387 ----IKVPGVTLCPGQGCAMPHYSLLCHITSYESLVSFG 14491
Score = 61.6 bits (148), Expect = 2e-07
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +2
Query: 18 PVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
PV K C+ GSAV C++VKTA DCGAVKHC Q VW+KPT S
Sbjct: 1799 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVVS 1927
Score = 53.5 bits (127), Expect = 5e-05
Identities = 27/75 (36%), Positives = 39/75 (52%)
Frame = +1
Query: 462 KEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKL 521
++EIL A +K CS LP ++C + V Y +L IL+E + P VCS + +C
Sbjct: 16363 QKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTRLP 16542
Query: 522 LLGTEKCVWGPSYWC 536
L E+ VW WC
Sbjct: 16543 ALTGERWVWCGRGWC 16587
Score = 52.0 bits (123), Expect = 2e-04
Identities = 22/26 (84%), Positives = 24/26 (91%)
Frame = +2
Query: 484 CDDFVAEYEPLLLEILVEVMDPGFVC 509
CD FVAEYEP+L+EILVEVMDP FVC
Sbjct: 17156 CDQFVAEYEPVLIEILVEVMDPSFVC 17233
Score = 50.4 bits (119), Expect = 4e-04
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Frame = +2
Query: 501 EVMDPGFVCSKIGVCPSAYKLL------LGTEKCVWGPSYWCQNMETAARCNAVDHCKRH 554
E+ VC K+G + +L LG ++C G + WCQN++TA+ C AV HC +
Sbjct: 1721 EISQVDLVCYKMGHLLTLVFILALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQT 1900
Query: 555 VWN 557
VWN
Sbjct: 1901 VWN 1909
Score = 47.4 bits (111), Expect(2) = 1e-24
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +1
Query: 340 LVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCA 391
++ C+ LP +CQEVV T+G S+L I + EV+P +C ++ LC+
Sbjct: 16372 ILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCS 16527
Score = 46.6 bits (109), Expect = 0.006
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +1
Query: 59 KSLPCDICKTVVTEAGNLLKDNATQ 83
KSLPCDICK VVT AG++LKDNAT+
Sbjct: 4363 KSLPCDICKDVVTAAGDMLKDNATE 4437
Score = 42.7 bits (99), Expect = 0.092
Identities = 26/56 (46%), Positives = 35/56 (62%)
Frame = +1
Query: 83 QEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLC 138
Q+EIL +K C + SLS C+EVVD+Y IL ++ E+S P VCS L+LC
Sbjct: 16363 QKEILDAFDKMCSKL-PKSLSEECQEVVDTYGSSILSILLEEVS-PELVCSMLHLC 16524
Score = 38.5 bits (88), Expect = 1.7
Identities = 14/23 (60%), Positives = 19/23 (81%)
Frame = +3
Query: 236 VSDICKNYVDQYSEVCVQMLMHM 258
+S CKNY+ QYSE+ +QM+MHM
Sbjct: 10380 LSPQCKNYISQYSEIAIQMMMHM 10448
>emb|X57108.1|HSCSAP11 Human gene for cerebroside sulfate activator protein, exons 10-14
Length = 1740
Score = 92.4 bits (228), Expect(2) = 1e-24
Identities = 43/52 (82%), Positives = 46/52 (87%)
Frame = +1
Query: 432 HVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQ 483
HV K+GGFCEVCKK V YL+ NLEKNSTK+EILAALEKGCSFLPDPYQKQ
Sbjct: 730 HVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQ 885
Score = 75.1 bits (183), Expect = 2e-11
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = +1
Query: 511 KIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCN 546
KIG CPSA+K LLGTEKC+WGPSYWCQN ETAA+CN
Sbjct: 1624 KIGACPSAHKPLLGTEKCIWGPSYWCQNTETAAQCN 1731
Score = 53.5 bits (127), Expect = 5e-05
Identities = 27/75 (36%), Positives = 39/75 (52%)
Frame = +3
Query: 462 KEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKL 521
++EIL A +K CS LP ++C + V Y +L IL+E + P VCS + +C
Sbjct: 447 QKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTRLP 626
Query: 522 LLGTEKCVWGPSYWC 536
L E+ VW WC
Sbjct: 627 ALTGERWVWCGRGWC 671
Score = 52.0 bits (123), Expect = 2e-04
Identities = 22/26 (84%), Positives = 24/26 (91%)
Frame = +2
Query: 484 CDDFVAEYEPLLLEILVEVMDPGFVC 509
CD FVAEYEP+L+EILVEVMDP FVC
Sbjct: 1238 CDQFVAEYEPVLIEILVEVMDPSFVC 1315
Score = 47.4 bits (111), Expect(2) = 1e-24
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +3
Query: 340 LVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCA 391
++ C+ LP +CQEVV T+G S+L I + EV+P +C ++ LC+
Sbjct: 456 ILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCS 611
Score = 42.7 bits (99), Expect = 0.092
Identities = 26/56 (46%), Positives = 35/56 (62%)
Frame = +3
Query: 83 QEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLC 138
Q+EIL +K C + SLS C+EVVD+Y IL ++ E+S P VCS L+LC
Sbjct: 447 QKEILDAFDKMCSKL-PKSLSEECQEVVDTYGSSILSILLEEVS-PELVCSMLHLC 608
>gb|BC014989.1|BC014989 Homo sapiens, Similar to phospholipid scramblase 3, clone MGC:23223
IMAGE:4907002, mRNA, complete cds
Length = 3105
Score = 115 bits (287), Expect = 1e-23
Identities = 53/88 (60%), Positives = 63/88 (71%)
Frame = +1
Query: 470 EKGCSFLPDPYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCV 529
EKGC F+ + + + + LE +MDP FVC KIG CPSA+K LLGTEKC+
Sbjct: 1678 EKGCIFICYIHINFVTFWTLKKKKKKLETS-SLMDPSFVCLKIGACPSAHKPLLGTEKCI 1854
Query: 530 WGPSYWCQNMETAARCNAVDHCKRHVWN 557
WGPSYWCQN ETAA+CNAV+HCKRHVWN
Sbjct: 1855 WGPSYWCQNTETAAQCNAVEHCKRHVWN 1938
Score = 37.0 bits (84), Expect = 5.1
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 18 PVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWS 54
P+ + C G + C++ +TA C AV+HC++ VW+
Sbjct: 1828 PLLGTEKCIWGPSYWCQNTETAAQCNAVEHCKRHVWN 1938
>gb|M12710.1|HUMSHP1A Human sphingolipid activator protein mRNA
Length = 207
Score = 114 bits (285), Expect = 2e-23
Identities = 45/67 (67%), Positives = 62/67 (92%)
Frame = +1
Query: 195 DVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQM 254
DVCQDC+++V+D+QTAV+TNS+F+Q V+HVKE+CDRLGPG++DICKNY+ QYSE+ +QM
Sbjct: 4 DVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQM 183
Query: 255 LMHMQDQ 261
+MHMQ +
Sbjct: 184 MMHMQPE 204
>emb|X14778.1|RNSPB Rat mRNA for pulmonary surfactant-associated protein SP-B
Length = 1494
Score = 105 bits (261), Expect = 2e-20
Identities = 95/381 (24%), Positives = 169/381 (43%), Gaps = 2/381 (0%)
Frame = +1
Query: 25 CSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATQE 84
C+ G C+ ++ A+ C A+ HC Q VW A L C C+ +V + K++A Q+
Sbjct: 94 CAQGPKFWCQSLEQAIQCRALGHCLQEVWGHAGANDL-CQECEDIVHLLTKMTKEDAFQD 270
Query: 85 EILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQEY 144
I +LE+ C+ + L C++V+D YLP+++D +G++ P +CS + LC L +
Sbjct: 271 TIRKFLEQECDILPLKLLVPRCRQVLDVYLPLVIDYFQGQI-KPKAICSHVGLC-PLGQT 444
Query: 145 LAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPR--SQPQPKANEDVCQDCMK 202
EQ + L++ IP + ++V P + L P H + S+ Q C C
Sbjct: 445 KPEQKPEMLDA--IPNPLLNKLVLPALPG-AFLARPGPHTQDLSEQQLPIPLPFCWLCRT 615
Query: 203 LVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLMHMQDQQ 262
L+ VQ + + V + C + V IC+ ++Y+ + + L+
Sbjct: 616 LIKRVQAVIPKGVLAVA-----VSQVCHVVPLVVGGICQCLAERYTVLLLDALLGR--VV 774
Query: 263 PKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTCQF 322
P+ +C L C+ + I LPALE + E+ +Q C C+
Sbjct: 775 PQLVCGLVLRCS------------TADAIGPALPALEPL--IEKWPLQDTE---CHFCKS 903
Query: 323 VMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSS 382
V+N+ N +E+ + + + AC L R KC++ V P LL + + +
Sbjct: 904 VINQ-----AWNTSEQAMPQAMHQAC-LRFWLDRQKCEQFVEQHMPQLLALVPRSQDAHT 1065
Query: 383 LCGVIGLCAARPELVEALEQP 403
C +G+C A ++ + P
Sbjct: 1066SCQALGVCEAPASPLQCFQTP 1128
Score = 62.4 bits (150), Expect = 1e-07
Identities = 75/337 (22%), Positives = 132/337 (38%), Gaps = 16/337 (4%)
Frame = +1
Query: 195 DVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVS-DICKNYVDQYSEVCVQ 253
D+CQ+C +V + T + +F ++++CD L + C+ +D Y + +
Sbjct: 199 DLCQECEDIVH-LLTKMTKEDAFQDTIRKFLEQECDILPLKLLVPRCRQVLDVYLPLVID 375
Query: 254 MLMHMQDQ-QPKEICVLAGFCNEVKRVP-----MKTLVPATETIKNILPALE-----MMD 302
+ Q Q +PK IC G C + P M +P K +LPAL
Sbjct: 376 ---YFQGQIKPKAICSHVGLCPLGQTKPEQKPEMLDAIPNPLLNKLVLPALPGAFLARPG 546
Query: 303 PYEQNLVQAHNVI---LCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKC 359
P+ Q+L + I C C+ ++ + +I +L +S C ++P C
Sbjct: 547 PHTQDLSEQQLPIPLPFCWLCRTLIKRVQAVIPKG----VLAVAVSQVCHVVPLVVGGIC 714
Query: 360 QEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXX 419
Q + + LLD + V P +CG++ C+ + AL P I L
Sbjct: 715 QCLAERYTVLLLDALLGRVVPQLVCGLVLRCSTADAIGPALPALEPLIEKWPLQDTE--- 885
Query: 420 XXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGC-SFLPD 478
C CK + N N++++ + A+ + C F D
Sbjct: 886 ----------------------CHFCKSVI-----NQAWNTSEQAMPQAMHQACLRFWLD 984
Query: 479 PYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVC 515
+++C+ FV ++ P LL ++ D C +GVC
Sbjct: 985 --RQKCEQFVEQHMPQLLALVPRSQDAHTSCQALGVC 1089
Score = 60.1 bits (144), Expect = 6e-07
Identities = 45/213 (21%), Positives = 92/213 (43%), Gaps = 10/213 (4%)
Frame = +1
Query: 316 LCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPART-KCQEVVGTFGPSLLDIF 374
LCQ C+ +++ +++ +A ++ + K L C +LP +C++V+ + P ++D F
Sbjct: 202 LCQECEDIVHLLTKMTKEDAFQDTIRKFLEQECDILPLKLLVPRCRQVLDVYLPLVIDYF 381
Query: 375 IHEVNPSSLCGVIGLCAA-------RPELVEALEQPA--PAIVSALLXXXXXXXXXXXXX 425
++ P ++C +GLC +PE+++A+ P ++ AL
Sbjct: 382 QGQIKPKAICSHVGLCPLGQTKPEQKPEMLDAIPNPLLNKLVLPALPGAFLARPGPHTQD 561
Query: 426 XXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCD 485
+P FC +C+ + ++ + K + A+ + C +P C
Sbjct: 562 LSEQQLPIPLP----FCWLCRTLIKRVQAVIPKGV----LAVAVSQVCHVVPLVVGGICQ 717
Query: 486 DFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSA 518
Y LLL+ L+ + P VC + C +A
Sbjct: 718 CLAERYTVLLLDALLGRVVPQLVCGLVLRCSTA 816
Score = 44.3 bits (103), Expect = 0.032
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 528 CVWGPSYWCQNMETAARCNAVDHCKRHVW 556
C GP +WCQ++E A +C A+ HC + VW
Sbjct: 94 CAQGPKFWCQSLEQAIQCRALGHCLQEVW 180
>gb|AF107544.1|AF107544 Ovis aries pulmonary surfactant-associated protein B (SP-B) mRNA,
partial cds
Length = 1660
Score = 91.7 bits (226), Expect = 2e-16
Identities = 90/389 (23%), Positives = 157/389 (40%), Gaps = 9/389 (2%)
Frame = +1
Query: 24 TCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATQ 83
TC+ G C+ ++ A+ C A+ HC Q VW A L C C+ + + K+ Q
Sbjct: 91 TCAQGPTFWCQSLEQALQCRALGHCLQEVWGHAEADDL-CQECENISRILTKMAKEAIFQ 267
Query: 84 EEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQE 143
+ + +LE+ C+ + L C+ ++D+Y P+I+D + +M NP +C + LC+
Sbjct: 268 DTVRKFLEQECDVLPLKLLVPQCRHLLDTYFPLIIDHFQSQM-NPKFICQHVGLCK---- 432
Query: 144 YLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYP---QDHPRSQPQPKANE------ 194
+ E K PE P + + L L P Q P Q Q + +
Sbjct: 433 ------PRHPEPGKGPE-----PWGPLLDKMALPLLPGALQAKPGPQTQDLSQQRFPIPL 579
Query: 195 DVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQM 254
C C L+ +Q + + V + C + V IC+ V++YS + +
Sbjct: 580 PFCWLCRTLIKRIQAVIPKGVLAMT-----VAQVCHVVPLLVGGICQCLVERYSVILLDT 744
Query: 255 LMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNV 314
L+ P+ +C L C+ + ++ LPAL + P E +
Sbjct: 745 LLGR--MLPQLVCGLVLRCS------------SEDSAGPALPALGSL-PGEWLPQDSE-- 873
Query: 315 ILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIF 374
CQ C FV + N++E+ + + + AC L R KC++ V P L +
Sbjct: 874 --CQLCMFVTTQ-----AGNSSEQAMPQAMRQAC-LGTWLDRQKCEQFVEEHAPRLQTLV 1029
Query: 375 IHEVNPSSLCGVIGLCAARPELVEALEQP 403
+ C +G CA ++ + P
Sbjct: 1030SSGWDAHMACQALGTCATPFSPLQCIHSP 1116
Score = 44.7 bits (104), Expect = 0.024
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 528 CVWGPSYWCQNMETAARCNAVDHCKRHVW 556
C GP++WCQ++E A +C A+ HC + VW
Sbjct: 94 CAQGPTFWCQSLEQALQCRALGHCLQEVW 180
Score = 37.0 bits (84), Expect = 5.1
Identities = 25/93 (26%), Positives = 42/93 (44%), Gaps = 2/93 (2%)
Frame = +1
Query: 442 CEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLP-DPYQKQCDDFVAEYEPLLLEILV 500
C+ C+ L ++ ++ + LE+ C LP QC + Y PL+++
Sbjct: 205 CQECENISRILTKMAKEAIFQDTVRKFLEQECDVLPLKLLVPQCRHLLDTYFPLIIDHFQ 384
Query: 501 EVMDPGFVCSKIGVC-PSAYKLLLGTEKCVWGP 532
M+P F+C +G+C P + G E WGP
Sbjct: 385 SQMNPKFICQHVGLCKPRHPEPGKGPEP--WGP 477
>gb|AF154047.1|AF154047 Naegleria fowleri naegleriapore B pore-forming peptide precursor
(proNP-B) mRNA, complete cds
Length = 1513
Score = 89.7 bits (221), Expect = 7e-16
Identities = 105/486 (21%), Positives = 188/486 (38%), Gaps = 7/486 (1%)
Frame = +1
Query: 39 AVDCGAVKHCQ--QMVWSKPTAKSLP-CDICKTVVTEAGNLLKDNATQEEILHYLEKTCE 95
A+ C VK C M + P A++ C++C+ +VT+ N ++ N T + LE+ C
Sbjct: 310 AIVCSQVKICNGSAMAVAAPKAENSGICNMCQLLVTQVENWVESNDTIMTLEKKLEQVCS 489
Query: 96 WIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLES 155
I SA C V+ YLP+ + ++ + +C ++LC S Q
Sbjct: 490 VI-PGQYSALCTYAVEQYLPIFIHQVEKQFPAL-TICQDVHLCSSAQ------------- 624
Query: 156 NKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNS 215
AP + Q + ++C C V ++T K N+
Sbjct: 625 -----------AAPVV-----------------QQQQAAELCPICKAAVGFLKT--KINN 714
Query: 216 SFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNE 275
+ ++ C V D C+ VD+ Q+ +Q + + IC
Sbjct: 715 VDVNAVKQQLEFACSFFQ--VPD-CQQIVDK----AAQIAQDLQTEDAQTIC-------- 849
Query: 276 VKRVPMKTLVPATETIKNILPALEMM--DPYEQNLVQAHNVILCQTCQFVMNKFSELIVN 333
T+ ++ P +++ +P+++ L +A + C TC + +LIV+
Sbjct: 850 -------------STVVDVCPKQQVVTFNPFKKFL-EAKDSKYCPTCLQITKYLEDLIVS 987
Query: 334 NATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAAR 393
+ T ++K CA L + C++ V L + + ++ P +C + +C A
Sbjct: 988 DITVNEIIKLADAGCARL-GALESLCKKFVPLAVDELKKLLLEKLPPQKVCSTLKMCDAA 1164
Query: 394 PELVEALEQPAPAIVSALLXXXXXXXXXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLE 453
L AL P +G C C+ + +
Sbjct: 1165ELLKLAL--------------------------------APQAADGTMCLACEYVISVAD 1248
Query: 454 HNLEKNSTKEEILAALEKGC-SFLPDPYQKQCDDFVAEYEPLLLEIL-VEVMDPGFVCSK 511
+ L N+T++ + L+K C F+P YQ QC V +YE L+++ +V +P VC
Sbjct: 1249NWLIANNTQQSVKNTLDKVCQEFVPSIYQSQCIALVNQYEAQLIQLFESKVFNPQTVCKA 1428
Query: 512 IGVCPS 517
IGVC S
Sbjct: 1429IGVCSS 1446
Score = 58.5 bits (140), Expect = 2e-06
Identities = 97/464 (20%), Positives = 163/464 (34%), Gaps = 3/464 (0%)
Frame = +1
Query: 63 CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIK 122
C+IC+ +V A + N T+ +I L + C + C ++V LP I+D I
Sbjct: 127 CEICEWLVATAEGFV--NKTKPQIEQELLQICAKL--GPYEQICDQLVLMELPDIIDQII 294
Query: 123 GEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQD 182
+ P VCS + +C A VA
Sbjct: 295 AK-EPPAIVCSQVKICNG----------------------SAMAVAA------------- 366
Query: 183 HPRSQPQPKA-NEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICK 241
PKA N +C C LV+ V+ V++N + I +++ C + S +C
Sbjct: 367 -------PKAENSGICNMCQLLVTQVENWVESNDT-IMTLEKKLEQVCSVIPGQYSALCT 522
Query: 242 NYVDQYSEVCVQMLMHMQDQQPK-EICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM 300
V+QY + + + + Q P IC C+ + P+ A E
Sbjct: 523 YAVEQYLPIFIHQV---EKQFPALTICQDVHLCSSAQAAPVVQQQQAAE----------- 660
Query: 301 MDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQ 360
LC C+ + F + +NN + + L AC+ P CQ
Sbjct: 661 ---------------LCPICKAAVG-FLKTKINNVDVNAVKQQLEFACSFFQVP---DCQ 783
Query: 361 EVVGTFGPSLLDIFIHEVNPSSLCG-VIGLCAARPELVEALEQPAPAIVSALLXXXXXXX 419
++V D+ + ++C V+ +C P+ P + A
Sbjct: 784 QIVDKAAQIAQDLQTEDAQ--TICSTVVDVC---PKQQVVTFNPFKKFLEA--------- 921
Query: 420 XXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDP 479
K+ +C C + YLE + + T EI+ + GC+ L
Sbjct: 922 -----------------KDSKYCPTCLQITKYLEDLIVSDITVNEIIKLADAGCARL-GA 1047
Query: 480 YQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLL 523
+ C FV L ++L+E + P VCS + +C +A L L
Sbjct: 1048LESLCKKFVPLAVDELKKLLLEKLPPQKVCSTLKMCDAAELLKL 1179
>gb|AF033190.1|AF033190 Cavia porcellus surfactant protein-B mRNA, complete cds
Length = 2102
Score = 87.4 bits (215), Expect = 3e-15
Identities = 87/382 (22%), Positives = 156/382 (40%), Gaps = 3/382 (0%)
Frame = +3
Query: 25 CSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATQE 84
CS G C+ ++ A+ C A+ HC Q VW A L C C+ +V + K+ Q+
Sbjct: 105 CSQGPKFWCQSLEQALQCRALGHCLQEVWGHVGADDL-CQECEDIVRILTKMAKEVIFQK 281
Query: 85 EILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQ-E 143
I +LE+ C+ + L C V+++Y P+++D + ++ P +C L LCQ Q +
Sbjct: 282 TIRKFLERECDVLPLKLLVPRCHSVLETYFPLVIDYFQSHIT-PKTICWNLGLCQPRQPD 458
Query: 144 YLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPR--SQPQPKANEDVCQDCM 201
E N + E +V P + L ++P H + S+ Q C+ C
Sbjct: 459 PQPEPGMPSPLPNSLSETSPDLLVPPRLPR-ALSVWPGPHTQDLSEQQFPIPLPYCRLCK 635
Query: 202 KLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLMHMQDQ 261
L+ VQ + + V + C + IC+ ++Y+ + + L +
Sbjct: 636 TLLKRVQAMIPKGVLAMA-----VAQVCHVVPLVAGGICQCLAERYTVLLLDAL--LSHL 794
Query: 262 QPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTCQ 321
P+ +C L C+ + +LPAL + + + L Q C C
Sbjct: 795 LPQLVCGLVLRCSMDNSAGL------------VLPALSLSEGW---LPQDSE---CDLCL 920
Query: 322 FVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPS 381
V + N++E + + AC P R KC++ V + P LL + +P
Sbjct: 921 SVTTR-----AWNSSELARPQAMHQACLSSP-LDRQKCKQFVEQYTPQLLALEPRGGDPR 1082
Query: 382 SLCGVIGLCAARPELVEALEQP 403
+ C +G+C ++ + P
Sbjct: 1083TTCQALGVCRGAKNPLQCFQIP 1148
Score = 43.9 bits (102), Expect = 0.041
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 516 PSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHVW 556
P A + C GP +WCQ++E A +C A+ HC + VW
Sbjct: 69 PGAAAQTTSSLACSQGPKFWCQSLEQALQCRALGHCLQEVW 191
>ref|NM_000542.1| Homo sapiens surfactant, pulmonary-associated protein B (SFTPB),
mRNA
Length = 1146
Score = 85.1 bits (209), Expect = 2e-14
Identities = 81/388 (20%), Positives = 155/388 (39%), Gaps = 9/388 (2%)
Frame = +1
Query: 25 CSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATQE 84
C+ G C+ ++ A+ C A+ HC Q VW A L C C+ +V + K+ Q+
Sbjct: 94 CAQGPEFWCQSLEQALQCRALGHCLQEVWGHVGADDL-CQECEDIVHILNKMAKEAIFQD 270
Query: 85 EILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQEY 144
+ +LE+ C + L C +V+D Y P+++D + ++ + G +C L LC+S Q
Sbjct: 271 TMRKFLEQECNVLPLKLLMPQCNQVLDDYFPLVIDYFQNQIDSNG-ICMHLGLCKSRQ-- 441
Query: 145 LAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYP---QDHPRSQPQPKANED------ 195
E Q+ S+ +P+ + P + + L + P Q P Q + +
Sbjct: 442 -PEPEQEPGMSDPLPKPLRDPLPDPLLDKLVLPVLPGALQARPGPHTQDLSEQQFPIPLP 618
Query: 196 VCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQML 255
C C L+ +Q + + + V + C + IC+ ++YS + + L
Sbjct: 619 YCWLCRALIKRIQAMIPKGALRVA-----VAQVCRVVPLVAGGICQCLAERYSVILLDTL 783
Query: 256 MHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVI 315
+ P+ +C L C+ ++ P E + P +
Sbjct: 784 LGR--MLPQLVCRLVLRCSMDDSAGPRS--PTGEWL-----------PRDSE-------- 894
Query: 316 LCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFI 375
C C V + N++E+ + + + AC + R KC++ V P LL +
Sbjct: 895 -CHLCMSVTTQ-----AGNSSEQAIPQAMLQAC-VGSWLDREKCKQFVEQHTPQLLTLVP 1053
Query: 376 HEVNPSSLCGVIGLCAARPELVEALEQP 403
+ + C +G+C ++ + P
Sbjct: 1054RGWDAHTTCQALGVCGTMSSPLQCIHSP 1137
Score = 44.3 bits (103), Expect = 0.032
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 528 CVWGPSYWCQNMETAARCNAVDHCKRHVW 556
C GP +WCQ++E A +C A+ HC + VW
Sbjct: 94 CAQGPEFWCQSLEQALQCRALGHCLQEVW 180
Score = 36.6 bits (83), Expect = 6.6
Identities = 19/77 (24%), Positives = 38/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 442 CEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLP-DPYQKQCDDFVAEYEPLLLEILV 500
C+ C+ V L ++ ++ + LE+ C+ LP QC+ + +Y PL+++
Sbjct: 205 CQECEDIVHILNKMAKEAIFQDTMRKFLEQECNVLPLKLLMPQCNQVLDDYFPLVIDYFQ 384
Query: 501 EVMDPGFVCSKIGVCPS 517
+D +C +G+C S
Sbjct: 385 NQIDSNGICMHLGLCKS 435
>gb|J02761.1|HUMPSPBA Human pulmonary surfactant-associated protein B (SP-B) mRNA,
complete cds
Length = 2026
Score = 84.7 bits (208), Expect = 2e-14
Identities = 81/388 (20%), Positives = 154/388 (38%), Gaps = 9/388 (2%)
Frame = +2
Query: 25 CSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATQE 84
C+ G C+ ++ A+ C A+ HC Q VW A L C C+ +V + K+ Q+
Sbjct: 107 CAQGPEFWCQSLEQALQCRALGHCLQEVWGHVGADDL-CQECEDIVHILNKMAKEAIFQD 283
Query: 85 EILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQEY 144
+ +LE+ C + L C +V+D Y P+++D + + + G +C L LC+S Q
Sbjct: 284 TMRKFLEQECNVLPLKLLMPQCNQVLDDYFPLVIDYFQNQTDSNG-ICMHLGLCKSRQ-- 454
Query: 145 LAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYP---QDHPRSQPQPKANED------ 195
E Q+ S+ +P+ + P + + L + P Q P Q + +
Sbjct: 455 -PEPEQEPGMSDPLPKPLRDPLPDPLLDKLVLPVLPGALQARPGPHTQDLSEQQFPIPLP 631
Query: 196 VCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQML 255
C C L+ +Q + + + V + C + IC+ ++YS + + L
Sbjct: 632 YCWLCRALIKRIQAMIPKGALAVA-----VAQVCRVVPLVAGGICQCLAERYSVILLDTL 796
Query: 256 MHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVI 315
+ P+ +C L C+ ++ P E + P +
Sbjct: 797 LGR--MLPQLVCRLVLRCSMDDSAGPRS--PTGEWL-----------PRDSE-------- 907
Query: 316 LCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFI 375
C C V + N++E+ + + + AC + R KC++ V P LL +
Sbjct: 908 -CHLCMSVTTQ-----AGNSSEQAIPQAMLQAC-VGSWLDREKCKQFVEQHTPQLLTLVP 1066
Query: 376 HEVNPSSLCGVIGLCAARPELVEALEQP 403
+ + C +G+C ++ + P
Sbjct: 1067RGWDAHTTCQALGVCGTMSSPLQCIHSP 1150
Score = 44.3 bits (103), Expect = 0.032
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 528 CVWGPSYWCQNMETAARCNAVDHCKRHVW 556
C GP +WCQ++E A +C A+ HC + VW
Sbjct: 107 CAQGPEFWCQSLEQALQCRALGHCLQEVW 193
>ref|XM_034120.2| Homo sapiens surfactant, pulmonary-associated protein B (SFTPB),
mRNA
Length = 1989
Score = 84.7 bits (208), Expect = 2e-14
Identities = 81/388 (20%), Positives = 154/388 (38%), Gaps = 9/388 (2%)
Frame = +1
Query: 25 CSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATQE 84
C+ G C+ ++ A+ C A+ HC Q VW A L C C+ +V + K+ Q+
Sbjct: 100 CAQGPEFWCQSLEQALQCRALGHCLQEVWGHVGADDL-CQECEDIVHILNKMAKEAIFQD 276
Query: 85 EILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQEY 144
+ +LE+ C + L C +V+D Y P+++D + + + G +C L LC+S Q
Sbjct: 277 TMRKFLEQECNVLPLKLLMPQCNQVLDDYFPLVIDYFQNQTDSNG-ICMHLGLCKSRQ-- 447
Query: 145 LAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYP---QDHPRSQPQPKANED------ 195
E Q+ S+ +P+ + P + + L + P Q P Q + +
Sbjct: 448 -PEPEQEPGMSDPLPKPLRDPLPDPLLDKLVLPVLPGALQARPGPHTQDLSEQQFPIPLP 624
Query: 196 VCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQML 255
C C L+ +Q + + + V + C + IC+ ++YS + + L
Sbjct: 625 YCWLCRALIKRIQAMIPKGALAVA-----VAQVCRVVPLVAGGICQCLAERYSVILLDTL 789
Query: 256 MHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVI 315
+ P+ +C L C+ ++ P E + P +
Sbjct: 790 LGR--MLPQLVCRLVLRCSMDDSAGPRS--PTGEWL-----------PRDSE-------- 900
Query: 316 LCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFI 375
C C V + N++E+ + + + AC + R KC++ V P LL +
Sbjct: 901 -CHLCMSVTTQ-----AGNSSEQAIPQAMLQAC-VGSWLDREKCKQFVEQHTPQLLTLVP 1059
Query: 376 HEVNPSSLCGVIGLCAARPELVEALEQP 403
+ + C +G+C ++ + P
Sbjct: 1060RGWDAHTTCQALGVCGTMSSPLQCIHSP 1143
Score = 44.3 bits (103), Expect = 0.032
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 528 CVWGPSYWCQNMETAARCNAVDHCKRHVW 556
C GP +WCQ++E A +C A+ HC + VW
Sbjct: 100 CAQGPEFWCQSLEQALQCRALGHCLQEVW 186
>gb|U17106.1|OCU17106 Oryctolagus cuniculus surfactant protein B (SP-B) mRNA, complete
cds
Length = 1747
Score = 84.3 bits (207), Expect = 3e-14
Identities = 83/383 (21%), Positives = 156/383 (40%), Gaps = 1/383 (0%)
Frame = +3
Query: 22 PKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNA 81
P C+ G C+ ++ A+ C A+ HC Q VW A L C C+ +V + K+
Sbjct: 93 PLACAQGPEFWCQSLEQALQCKALGHCLQEVWGHVGADDL-CQECQDIVNILTKMTKEAI 269
Query: 82 TQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSL 141
Q+ I +LE C+ + L C V+D Y P+ + + ++ N +C L LCQ
Sbjct: 270 FQDTIRKFLEHECDVLPLKLLVPQCHHVLDVYFPLTITYFQSQI-NAKAICQHLGLCQ-- 440
Query: 142 QEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDVCQDCM 201
+ + +P+ V+ + +P P S + +C C
Sbjct: 441 ------PGSPEPPLDPLPD---KLVLPTLLGALPAKPGPHTQDLSAQRFPIPLPLCWLCR 593
Query: 202 KLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLM-HMQD 260
L+ +Q + + V + C + V IC+ ++Y+ + +++L+ H+
Sbjct: 594 TLLKRIQAMIPKGVLAMA-----VAQVCHVVPLVVGGICQRLAERYTVILLEVLLGHV-- 752
Query: 261 QQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTC 320
P+ +C L C+ V ++I + P LE + P E L Q C+ C
Sbjct: 753 -LPQLVCGLVLRCSSV------------DSIGQVPPTLEAL-PGEW-LPQDPE---CRLC 878
Query: 321 QFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNP 380
V + N +E+ + + +AC L + +C++ V P LL + +
Sbjct: 879 MSVTTQ-----ARNISEQTRPQAVYHAC-LSSQLDKQECEQFVELHTPQLLSLLSRGWDA 1040
Query: 381 SSLCGVIGLCAARPELVEALEQP 403
++C +G C A ++ ++ P
Sbjct: 1041RAICQALGACVATLSPLQCIQSP 1109
Score = 50.1 bits (118), Expect = 6e-04
Identities = 45/205 (21%), Positives = 81/205 (38%), Gaps = 3/205 (1%)
Frame = +3
Query: 316 LCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPART-KCQEVVGTFGPSLLDIF 374
LCQ CQ ++N +++ ++ + K L + C +LP +C V+ + P + F
Sbjct: 210 LCQECQDIVNILTKMTKEAIFQDTIRKFLEHECDVLPLKLLVPQCHHVLDVYFPLTITYF 389
Query: 375 IHEVNPSSLCGVIGLCAARPELVEALEQPAP--AIVSALLXXXXXXXXXXXXXXXXXXXH 432
++N ++C +GLC +P E P P ++ LL
Sbjct: 390 QSQINAKAICQHLGLC--QPGSPEPPLDPLPDKLVLPTLLGALPAKPGPHTQDLSAQRFP 563
Query: 433 VPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYE 492
+P C +C+ L ++ K + A+ + C +P C Y
Sbjct: 564 IPLP----LCWLCRT----LLKRIQAMIPKGVLAMAVAQVCHVVPLVVGGICQRLAERYT 719
Query: 493 PLLLEILVEVMDPGFVCSKIGVCPS 517
+LLE+L+ + P VC + C S
Sbjct: 720 VILLEVLLGHVLPQLVCGLVLRCSS 794
Score = 44.3 bits (103), Expect = 0.032
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 528 CVWGPSYWCQNMETAARCNAVDHCKRHVW 556
C GP +WCQ++E A +C A+ HC + VW
Sbjct: 102 CAQGPEFWCQSLEQALQCKALGHCLQEVW 188
>gb|M15170.1|DOGSP18A Dog pulmonary surfactant protein 18 (SP 18) mRNA, partial cds
Length = 1442
Score = 82.4 bits (202), Expect = 1e-13
Identities = 81/367 (22%), Positives = 146/367 (39%), Gaps = 1/367 (0%)
Frame = +1
Query: 25 CSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATQE 84
C+ G A C+ ++ A+ C A+ HC Q VW A L C C+ +V + K+ Q+
Sbjct: 73 CARGPAFWCQSLEQALQCRALGHCLQEVWGNARADDL-CQECQDIVRILTKMTKEAIFQD 249
Query: 85 EILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQEY 144
+ +LE C+ + L+ C ++ +Y PV++D + ++ NP +C L LC +
Sbjct: 250 MVRKFLEHECDVLPLKLLTPQCHHMLGTYFPVVVDYFQSQI-NPKIICKHLGLC---KPG 417
Query: 145 LAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDVCQDCMKLV 204
L E Q+ S+ + + +++ P + + P S+ Q C C L+
Sbjct: 418 LPEPEQESELSDPL----LDKLILPELPGALQVTGPHTQDLSEQQLPIPLPYCWLCRTLI 585
Query: 205 SDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLMHMQDQQPK 264
+Q + + V + C + V IC+ ++Y+ + + L+ P+
Sbjct: 586 KRIQAMIPKGVLAVT-----VGQVCHVVPLVVGGICQCLGERYTVLLLDALLGR--MLPQ 744
Query: 265 EICVLAGFC-NEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTCQFV 323
+C L C +E P +P+ P E CQ C FV
Sbjct: 745 LVCGLVLRCSHEDSAGPALASLPSE------------WSPQESK---------CQLCMFV 861
Query: 324 MNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSL 383
+ N +E+ + + AC L R KC++ V P L + + +
Sbjct: 862 TTQ-----AGNHSEQATPQAIRQAC-LSSWLDRQKCEQFVEQHMPRLQTLASGGRDAHTT 1023
Query: 384 CGVIGLC 390
C +G C
Sbjct: 1024CQALGAC 1044
Score = 53.9 bits (128), Expect = 4e-05
Identities = 45/202 (22%), Positives = 83/202 (40%), Gaps = 2/202 (0%)
Frame = +1
Query: 316 LCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPART-KCQEVVGTFGPSLLDIF 374
LCQ CQ ++ +++ ++++ K L + C +LP T +C ++GT+ P ++D F
Sbjct: 181 LCQECQDIVRILTKMTKEAIFQDMVRKFLEHECDVLPLKLLTPQCHHMLGTYFPVVVDYF 360
Query: 375 IHEVNPSSLCGVIGLC-AARPELVEALEQPAPAIVSALLXXXXXXXXXXXXXXXXXXXHV 433
++NP +C +GLC PE + E P + +L
Sbjct: 361 QSQINPKIICKHLGLCKPGLPEPEQESELSDPLLDKLILPELPGALQVTGPHTQDLSEQQ 540
Query: 434 PPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEP 493
P +C +C+ + ++ + K + + + C +P C Y
Sbjct: 541 LPIPL-PYCWLCRTLIKRIQAMIPKG----VLAVTVGQVCHVVPLVVGGICQCLGERYTV 705
Query: 494 LLLEILVEVMDPGFVCSKIGVC 515
LLL+ L+ M P VC + C
Sbjct: 706 LLLDALLGRMLPQLVCGLVLRC 771
Score = 47.0 bits (110), Expect = 0.005
Identities = 73/355 (20%), Positives = 140/355 (38%), Gaps = 14/355 (3%)
Frame = +1
Query: 194 EDVCQDCMKLVSDVQTAVKTN--SSFIQGFVDHVKEDCDRLGPGV-SDICKNYVDQYSEV 250
+D+CQ+C +V + K ++ F++H +CD L + + C + + Y V
Sbjct: 175 DDLCQECQDIVRILTKMTKEAIFQDMVRKFLEH---ECDVLPLKLLTPQCHHMLGTYFPV 345
Query: 251 CVQMLMHMQDQ-QPKEICVLAGFCNEVKRVPMKTLVPATETI-KNILP----ALEMMDPY 304
V + Q Q PK IC G C P + + + K ILP AL++ P+
Sbjct: 346 VVD---YFQSQINPKIICKHLGLCKPGLPEPEQESELSDPLLDKLILPELPGALQVTGPH 516
Query: 305 EQNLVQAHNVI---LCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQE 361
Q+L + I C C+ ++ + +I +L + C ++P CQ
Sbjct: 517 TQDLSEQQLPIPLPYCWLCRTLIKRIQAMIPKG----VLAVTVGQVCHVVPLVVGGICQC 684
Query: 362 VVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXXXX 421
+ + LLD + + P +CG++ C+ + PA+ S
Sbjct: 685 LGERYTVLLLDALLGRMLPQLVCGLVLRCSHE-------DSAGPALAS------------ 807
Query: 422 XXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGC--SFLPDP 479
PQ++ C++C ++ E+ + + A+ + C S+L
Sbjct: 808 -------LPSEWSPQESK--CQLCMFVTTQAGNHSEQATPQ-----AIRQACLSSWLD-- 939
Query: 480 YQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLLGTEKCVWGPSY 534
+++C+ FV ++ P L + D C +G C + + L +C+ P +
Sbjct: 940 -RQKCEQFVEQHMPRLQTLASGGRDAHTTCQALGACRTTFSPL----QCIHIPHF 1089
Score = 44.3 bits (103), Expect = 0.032
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 528 CVWGPSYWCQNMETAARCNAVDHCKRHVW 556
C GP++WCQ++E A +C A+ HC + VW
Sbjct: 73 CARGPAFWCQSLEQALQCRALGHCLQEVW 159
>gb|U66367.1|DDU66367 Dictyostelium discoideum SapA (sapA) mRNA, partial cds
Length = 1390
Score = 78.6 bits (192), Expect = 2e-12
Identities = 61/279 (21%), Positives = 117/279 (41%), Gaps = 1/279 (0%)
Frame = +2
Query: 240 CKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE 299
C ++ Y + V++L++ + P+ +C++ C++ + ++P N++ +
Sbjct: 26 CVEIINNYGVLMVRLLINRES--PENVCLMMELCSKSSS---ELIMPI-----NVVAVGD 175
Query: 300 MMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLP-DPARTK 358
+D E + C C+F+ K + N TE +++ L N C LL D +
Sbjct: 176 EVDNVEGSGE-------CLVCEFISEKIVTYLEANQTETQILQYLDNDCKLLKSDNWIST 334
Query: 359 CQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXX 418
CQ ++ + P ++ + + PS LC I C++ + I S+
Sbjct: 335 CQNLIQEYEPQIIAVVEGFMAPSELCQKIKFCSS-----SSSTNDFDFIGSSTTD----- 484
Query: 419 XXXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPD 478
CE+C Y E+ LE+N T E+I+ ++ C LP
Sbjct: 485 -----------------------CEICTFISGYAENFLEENKTLEDIIKVVDDFCKILPA 595
Query: 479 PYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPS 517
Y+ C + Y P ++++L PG VC K+ +CP+
Sbjct: 596 AYKTDCVAMASNYIPAIIKMLENDNSPGQVCQKLNLCPA 712
Score = 76.6 bits (187), Expect = 6e-12
Identities = 93/458 (20%), Positives = 164/458 (35%), Gaps = 2/458 (0%)
Frame = +2
Query: 63 CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIK 122
C +C+ + + L+ N T+ +IL YL+ C+ + + ++C+ ++ Y P I+ +++
Sbjct: 206 CLVCEFISEKIVTYLEANQTETQILQYLDNDCKLLKSDNWISTCQNLIQEYEPQIIAVVE 385
Query: 123 GEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQD 182
G M+ P E+C + C S + N + + ++ ++ + N
Sbjct: 386 GFMA-PSELCQKIKFCSSS----SSTNDFDFIGSSTTDCEICTFISGYAENF-------- 526
Query: 183 HPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKN 242
+D +K+V D C L C
Sbjct: 527 --------LEENKTLEDIIKVVDDF---------------------CKILPAAYKTDCVA 619
Query: 243 YVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMD 302
Y ++ML + D P ++C C P T P+T I
Sbjct: 620 MASNYIPAIIKMLEN--DNSPGQVCQKLNLCP----APTPTSTPSTIKIDV--------- 754
Query: 303 PYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKG-LSNACALLPDPARTKCQE 361
N+ C+ C+ V+ F+E + +A + VK L N C LP C E
Sbjct: 755 ----------NINKCEICETVIG-FAEKYLGSALDSQTVKTFLQNECNKLPGVVGDVCNE 901
Query: 362 VVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXXXX 421
VV + + + NP+ +C + C A E +A E
Sbjct: 902 VVNEYLEFAVTQLEAKFNPTEICQLFSFCTAGSESSDASE-------------------- 1021
Query: 422 XXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQ 481
++ Q CEV V+Y +KN T L K CS L
Sbjct: 1022---IKINNNSYIDCQ----ICEVLANFVVY-----DKNYT-THFEDKLNKLCSCLSRSLI 1162
Query: 482 KQCDDFVAEYEPLLLEILVEVMDPGF-VCSKIGVCPSA 518
+ C +FV++Y L +I+V+ + C++I CP++
Sbjct: 1163EPCLNFVSQYGSDLEQIIVQGGESAAEACNQIAQCPTS 1276
Score = 55.8 bits (133), Expect = 1e-05
Identities = 41/169 (24%), Positives = 71/169 (41%), Gaps = 1/169 (0%)
Frame = +2
Query: 351 LPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSA 410
LP C E++ +G ++ + I+ +P ++C ++ LC+ + E P V A
Sbjct: 2 LPKEYAQDCVEIINNYGVLMVRLLINRESPENVCLMMELCSK-----SSSELIMPINVVA 166
Query: 411 LLXXXXXXXXXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALE 470
+ V + G C VC+ + LE N T+ +IL L+
Sbjct: 167 V------------------GDEVDNVEGSGECLVCEFISEKIVTYLEANQTETQILQYLD 292
Query: 471 KGCSFLP-DPYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSA 518
C L D + C + + EYEP ++ ++ M P +C KI C S+
Sbjct: 293 NDCKLLKSDNWISTCQNLIQEYEPQIIAVVEGFMAPSELCQKIKFCSSS 439
>gb|AF196309.1|AF196309 Naegleria fowleri naegleriapore B precursor (NP-B) gene, partial
cds
Length = 1693
Score = 75.9 bits (185), Expect = 1e-11
Identities = 96/474 (20%), Positives = 173/474 (36%), Gaps = 4/474 (0%)
Frame = +2
Query: 48 CQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCK 107
C ++ PT + + + N ++ N T + LE+ C I SA C
Sbjct: 548 CPILISIIPTQNPTTITLHRISIHITENWVESNDTIMTLEKKLEQVCSVI-PGQYSALCT 724
Query: 108 EVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVV 167
V+ YLP+ + ++ + +C ++LC S Q Q Q+ E
Sbjct: 725 YAVEQYLPIFIHQVEKQFPAL-TICQDVHLCSSAQAAPVVQQQQAAE------------- 862
Query: 168 APFMSNIPLLLYPQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKE 227
+C C V ++T K N+ + ++
Sbjct: 863 ----------------------------LCPICKAAVGFLKT--KINNVDVNAVKQQLEF 952
Query: 228 DCDRLGPGVSDICKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPA 287
C V D C+ VD+ Q+ +Q + + IC
Sbjct: 953 ACSFFQ--VPD-CQQIVDK----AAQIAQDLQTEDAQTIC-------------------- 1051
Query: 288 TETIKNILPALEMM--DPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLS 345
T+ ++ P +++ +P+++ L +A + C TC + +LIV++ T ++K
Sbjct: 1052-STVVDVCPKQQVVTFNPFKKFL-EAKDSKYCPTCLQITKYLEDLIVSDITVNEIIKLAD 1225
Query: 346 NACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAP 405
CA L + C++ V L + + ++ P +C + +C A L AL
Sbjct: 1226AGCARL-GALESLCKKFVPLAVDELKKLLLEKLPPQKVCSTLKMCDAAELLKLAL----- 1387
Query: 406 AIVSALLXXXXXXXXXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEI 465
P +G C C+ + ++ L N+T++ +
Sbjct: 1388---------------------------APQAADGTMCLACEYVISVADNWLIANNTQQSV 1486
Query: 466 LAALEKGCS-FLPDPYQKQCDDFVAEYEPLLLEIL-VEVMDPGFVCSKIGVCPS 517
L+K C F+P YQ QC V +YE L+++ +V +P VC IGVC S
Sbjct: 1487KNTLDKVCQEFVPSIYQSQCIALVNQYEAQLIQLFESKVFNPQTVCKAIGVCSS 1648
Score = 52.8 bits (125), Expect = 9e-05
Identities = 27/104 (25%), Positives = 50/104 (47%), Gaps = 5/104 (4%)
Frame = +2
Query: 42 CGAVKHCQ-----QMVWSKPTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEW 96
C +K C ++ + A C C+ V++ A N L N TQ+ + + L+K C+
Sbjct: 1337 CSTLKMCDAAELLKLALAPQAADGTMCLACEYVISVADNWLIANNTQQSVKNTLDKVCQE 1516
Query: 97 IHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQS 140
S + C +V+ Y ++ + + ++ NP VC A+ +C S
Sbjct: 1517 FVPSIYQSQCIALVNQYEAQLIQLFESKVFNPQTVCKAIGVCSS 1648
Score = 43.1 bits (100), Expect = 0.071
Identities = 72/352 (20%), Positives = 124/352 (34%), Gaps = 17/352 (4%)
Frame = +2
Query: 189 QPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDR-------LGPGVSDICK 241
QP N+D DC L+S + T T + + + H+ E+ L + +C
Sbjct: 521 QPH*NDDA--DCPILISIIPTQNPTTITLHRISI-HITENWVESNDTIMTLEKKLEQVCS 691
Query: 242 NYVDQYSEVC-------VQMLMHMQDQQ--PKEICVLAGFCNEVKRVPMKTLVPATETIK 292
QYS +C + + +H ++Q IC C+ + P+ A E
Sbjct: 692 VIPGQYSALCTYAVEQYLPIFIHQVEKQFPALTICQDVHLCSSAQAAPVVQQQQAAE--- 862
Query: 293 NILPALEMMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLP 352
LC C+ + F + +NN + + L AC+
Sbjct: 863 -----------------------LCPICKAAVG-FLKTKINNVDVNAVKQQLEFACSFFQ 970
Query: 353 DPARTKCQEVVGTFGPSLLDIFIHEVNPSSLCG-VIGLCAARPELVEALEQPAPAIVSAL 411
P CQ++V D+ + ++C V+ +C P+ P + A
Sbjct: 971 VP---DCQQIVDKAAQIAQDLQTEDAQ--TICSTVVDVC---PKQQVVTFNPFKKFLEA- 1123
Query: 412 LXXXXXXXXXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEK 471
K+ +C C + YLE + + T EI+ +
Sbjct: 1124-------------------------KDSKYCPTCLQITKYLEDLIVSDITVNEIIKLADA 1228
Query: 472 GCSFLPDPYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCPSAYKLLL 523
GC+ L + C FV L ++L+E + P VCS + +C +A L L
Sbjct: 1229GCARL-GALESLCKKFVPLAVDELKKLLLEKLPPQKVCSTLKMCDAAELLKL 1381
Score = 38.9 bits (89), Expect = 1.3
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +1
Query: 442 CEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEILVE 501
CE+C+ V E + N TK +I L + C+ L PY++ CD V P +++ ++
Sbjct: 13 CEICEWLVATAEGFV--NKTKPQIEQELLQICAKL-GPYEQICDQLVLMELPDIIDQIIA 183
Query: 502 VMDPGFVCSKIGVC 515
P VCS++ +C
Sbjct: 184 KEPPAIVCSQVKIC 225
>emb|X57107.1|HSCSAP3 Human gene for cerebroside sulfate activator protein, exons 3-4
Length = 816
Score = 71.6 bits (174), Expect = 2e-10
Identities = 32/42 (76%), Positives = 38/42 (90%)
Frame = +1
Query: 84 EEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEM 125
EEIL YLEKTC+W+ ++SASCKE+VDSYLPVILD+IKGEM
Sbjct: 682 EEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVILDIIKGEM 807
Score = 46.6 bits (109), Expect = 0.006
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +1
Query: 59 KSLPCDICKTVVTEAGNLLKDNATQ 83
KSLPCDICK VVT AG++LKDNAT+
Sbjct: 16 KSLPCDICKDVVTAAGDMLKDNATE 90
>gb|M24901.1|RABSPBA Rabbit pulmonary surfactant-associated protein (SP-B) mRNA,
complete cds
Length = 1705
Score = 70.5 bits (171), Expect = 4e-10
Identities = 82/383 (21%), Positives = 151/383 (39%), Gaps = 1/383 (0%)
Frame = +3
Query: 22 PKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNA 81
P C+ G C+ ++ A+ C A+ HC Q VW A L C C+ +V + K+
Sbjct: 96 PLACAQGPEFWCQSLEQALQCKALGHCLQEVWGHVGADDL-CQECQDIVNILTKMTKEAI 272
Query: 82 TQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSL 141
Q+ I +LE C+ + L C V+D Y P+ + + ++ N +C L LCQ
Sbjct: 273 FQDTIRKFLEHECDVLPLKLLVPQCHHVLDVYFPLTITYFQSQI-NAKAICQHLGLCQ-- 443
Query: 142 QEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDVCQDCM 201
+ + +P+ V+ + +P P S +C C
Sbjct: 444 ------PGSPEPPLDPLPD---KLVLPTLLGALPAKPGPHTQDLSAQPFPIPLPLCWLCR 596
Query: 202 KLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLM-HMQD 260
L+ +Q + + V + C + V IC+ ++Y+ + +++L+ H+
Sbjct: 597 TLLKRIQAMIPKGVLAMA-----VAQVCHVVPLVVGGICQCLAERYTVILLEVLLGHV-- 755
Query: 261 QQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTC 320
P+ +C L C+ V ++I + P LE + P E L Q C+ C
Sbjct: 756 -LPQLVCGLVLRCSSV------------DSIGQVPPTLEAL-PGEW-LPQDPE---CRLC 881
Query: 321 QFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFIHEVNP 380
V + N +E+ + + +AC L + +C++ V P+ P
Sbjct: 882 MSVTTQ-----ARNISEQTRPQAVYHAC-LSSQLDKQECEQFVAAHAPAAEPAVQGLGCP 1043
Query: 381 SSLCGVIGLCAARPELVEALEQP 403
+L G G A ++ ++ P
Sbjct: 1044RNLPGPEGRVVATLSPLQCIQSP 1112
Score = 49.3 bits (116), Expect = 0.001
Identities = 45/205 (21%), Positives = 81/205 (38%), Gaps = 3/205 (1%)
Frame = +3
Query: 316 LCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPART-KCQEVVGTFGPSLLDIF 374
LCQ CQ ++N +++ ++ + K L + C +LP +C V+ + P + F
Sbjct: 213 LCQECQDIVNILTKMTKEAIFQDTIRKFLEHECDVLPLKLLVPQCHHVLDVYFPLTITYF 392
Query: 375 IHEVNPSSLCGVIGLCAARPELVEALEQPAP--AIVSALLXXXXXXXXXXXXXXXXXXXH 432
++N ++C +GLC +P E P P ++ LL
Sbjct: 393 QSQINAKAICQHLGLC--QPGSPEPPLDPLPDKLVLPTLLGALPAKPGPHTQDLSAQPFP 566
Query: 433 VPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYE 492
+P C +C+ L ++ K + A+ + C +P C Y
Sbjct: 567 IPLP----LCWLCRT----LLKRIQAMIPKGVLAMAVAQVCHVVPLVVGGICQCLAERYT 722
Query: 493 PLLLEILVEVMDPGFVCSKIGVCPS 517
+LLE+L+ + P VC + C S
Sbjct: 723 VILLEVLLGHVLPQLVCGLVLRCSS 797
Score = 44.3 bits (103), Expect = 0.032
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 528 CVWGPSYWCQNMETAARCNAVDHCKRHVW 556
C GP +WCQ++E A +C A+ HC + VW
Sbjct: 105 CAQGPEFWCQSLEQALQCKALGHCLQEVW 191
>dbj|D17028.1|HUMD3C07M5 Human HepG2 partial cDNA, clone hmd3c07m5
Length = 133
Score = 67.4 bits (163), Expect = 3e-09
Identities = 29/45 (64%), Positives = 37/45 (81%)
Frame = +2
Query: 222 VDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLMHMQDQQPKEI 266
V+HVKE+CDRL PG++DICK Y+ QYSE+ +QM+MHM QPK I
Sbjct: 8 VEHVKEECDRLAPGMADICKTYISQYSEIPIQMMMHM---QPKXI 133
>gb|AF154046.1|AF154046 Naegleria fowleri naegleriapore A pore-forming peptide precursor
(proNP-A) mRNA, complete cds
Length = 989
Score = 63.5 bits (153), Expect = 5e-08
Identities = 59/231 (25%), Positives = 96/231 (41%), Gaps = 1/231 (0%)
Frame = +2
Query: 55 KPTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYL 114
K TA C+ICK V+ + ++ N +Q EI L K C + S + +C + +
Sbjct: 371 KATAGDAECEICKFVIQQVEAFIESNHSQAEIQKELNKLCSSV-PSIFTQTCLSIA-RMV 544
Query: 115 PVILDMIKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNI 174
P I+ ++ E ++PG+VC L+LC +S+ + + +V A I
Sbjct: 545 PYIIKKLE-EHNSPGQVCQGLHLC---------------KSSAVKTMPTFQVDAELKGLI 676
Query: 175 PLLLYPQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFV-DHVKEDCDRLG 233
P C C+ + V+ + +S +Q FV D +K C +L
Sbjct: 677 P---------------------CPACLMAMELVEQEISQSS--VQSFVEDKLKNVCAKLP 787
Query: 234 PGVSDICKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTL 284
S C + V+QY V VQ L + P++IC L C +K L
Sbjct: 788 STFSGYCASLVNQYFPVLVQKL--LLAVSPEKICKLVDACPASSSKAVKAL 934
Score = 60.8 bits (146), Expect = 3e-07
Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 2/204 (0%)
Frame = +2
Query: 317 CQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTK-CQEVVGTFGPSLLDIFI 375
C C++ + + +L + N E + L AC L D K C VV +G L++ +
Sbjct: 86 CDVCKYAVQQVDQLALQN--EAAIQNALLAACQQLGDNQFGKICNTVVLVYGNELVNALV 259
Query: 376 HEVNPSSLCGV-IGLCAARPELVEALEQPAPAIVSALLXXXXXXXXXXXXXXXXXXXHVP 434
NP+ +C + LC P+ PAP + V
Sbjct: 260 TYENPTRVCSEQLPLC---PKNNTVAVTPAPVVTVP-------------------KEEVK 373
Query: 435 PQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPL 494
CE+CK + +E +E N ++ EI L K CS +P + + C +A P
Sbjct: 374 ATAGDAECEICKFVIQQVEAFIESNHSQAEIQKELNKLCSSVPSIFTQTCLS-IARMVPY 550
Query: 495 LLEILVEVMDPGFVCSKIGVCPSA 518
+++ L E PG VC + +C S+
Sbjct: 551 IIKKLEEHNSPGQVCQGLHLCKSS 622
>gb|AC073370.6| Homo sapiens chromosome 10 clone RP11-472G21, complete sequence
Length = 178251
Score = 61.6 bits (148), Expect = 2e-07
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = -1
Query: 18 PVQDPKTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKS 60
PV K C+ GSAV C++VKTA DCGAVKHC Q VW+KPT S
Sbjct: 3015 PVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQTVWNKPTVVS 2887
Score = 50.4 bits (119), Expect = 4e-04
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Frame = -1
Query: 501 EVMDPGFVCSKIGVCPSAYKLL------LGTEKCVWGPSYWCQNMETAARCNAVDHCKRH 554
E+ VC K+G + +L LG ++C G + WCQN++TA+ C AV HC +
Sbjct: 3093 EISQVDLVCYKMGHLLTLVFILALAGPVLGLKECTRGSAVWCQNVKTASDCGAVKHCLQT 2914
Query: 555 VWN 557
VWN
Sbjct: 2913 VWN 2905
Score = 46.6 bits (109), Expect = 0.006
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = -1
Query: 59 KSLPCDICKTVVTEAGNLLKDNATQ 83
KSLPCDICK VVT AG++LKDNAT+
Sbjct: 441 KSLPCDICKDVVTAAGDMLKDNATE 367
>ref|NM_120258.1| Arabidopsis thaliana chromosome 5 CHR5v12152001 genomic sequence
Length = 1026
Score = 54.3 bits (129), Expect = 3e-05
Identities = 51/218 (23%), Positives = 90/218 (40%), Gaps = 1/218 (0%)
Frame = +2
Query: 300 MMDPYEQNLVQAHNVI-LCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTK 358
+++P+E AH+ +C+ C + + + + + LV+ L +C+ +P P + +
Sbjct: 233 LLEPFES----AHDDNQVCELCDKYVTLVIDYLQDYDNQNELVEALHISCSQIP-PLKKQ 397
Query: 359 CQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXX 418
C +V + L + + +C + LC A PA S
Sbjct: 398 CLSMVDHY-TQLFFTQVSTIKSDQICKRLNLCQA----------VTPAFAS--------- 517
Query: 419 XXXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPD 478
Q + G CE C++ V + L+ TK +I+ L K C L +
Sbjct: 518 -----------------QVHQGNCEACRETVSEVVTKLKDPETKLKIIRLLLKECKSLNN 646
Query: 479 PYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCP 516
YQ +C V EY PL+L L + ++ VC+ + VCP
Sbjct: 647 -YQDKCKKMVFEYGPLMLTDLQKFLEKKDVCTILHVCP 757
Score = 47.4 bits (111), Expect = 0.004
Identities = 48/239 (20%), Positives = 89/239 (37%)
Frame = +2
Query: 63 CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIK 122
C++C VT + L+D Q E++ L +C I L C +VD Y + +
Sbjct: 275 CELCDKYVTLVIDYLQDYDNQNELVEALHISCSQI--PPLKKQCLSMVDHYTQLFFTQVS 448
Query: 123 GEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQD 182
S+ ++C LNLCQ++ A Q
Sbjct: 449 TIKSD--QICKRLNLCQAVTPAFASQ---------------------------------- 520
Query: 183 HPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKN 242
++ C+ C + VS+V T +K + ++ + + ++C L D CK
Sbjct: 521 ---------VHQGNCEACRETVSEVVTKLKDPETKLK-IIRLLLKECKSLN-NYQDKCKK 667
Query: 243 YVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMM 301
V +Y + + L ++ K++C + C P T ++ +PA+E +
Sbjct: 668 MVFEYGPLMLTDLQKFLEK--KDVCTILHVC------------PGPATHRDYVPAVESL 802
>gb|AY056420.1| Arabidopsis thaliana AT5g01800/T20L15_70 mRNA, complete cds
Length = 1027
Score = 54.3 bits (129), Expect = 3e-05
Identities = 51/218 (23%), Positives = 90/218 (40%), Gaps = 1/218 (0%)
Frame = +2
Query: 300 MMDPYEQNLVQAHNVI-LCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTK 358
+++P+E AH+ +C+ C + + + + + LV+ L +C+ +P P + +
Sbjct: 233 LLEPFES----AHDDNQVCELCDKYVTLVIDYLQDYDNQNELVEALHISCSQIP-PLKKQ 397
Query: 359 CQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXX 418
C +V + L + + +C + LC A PA S
Sbjct: 398 CLSMVDHY-TQLFFTQVSTIKSDQICKRLNLCQA----------VTPAFAS--------- 517
Query: 419 XXXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPD 478
Q + G CE C++ V + L+ TK +I+ L K C L +
Sbjct: 518 -----------------QVHQGNCEACRETVSEVVTKLKDPETKLKIIRLLLKECKSLNN 646
Query: 479 PYQKQCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVCP 516
YQ +C V EY PL+L L + ++ VC+ + VCP
Sbjct: 647 -YQDKCKKMVFEYGPLMLTDLQKFLEKKDVCTILHVCP 757
Score = 47.4 bits (111), Expect = 0.004
Identities = 48/239 (20%), Positives = 89/239 (37%)
Frame = +2
Query: 63 CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIK 122
C++C VT + L+D Q E++ L +C I L C +VD Y + +
Sbjct: 275 CELCDKYVTLVIDYLQDYDNQNELVEALHISCSQI--PPLKKQCLSMVDHYTQLFFTQVS 448
Query: 123 GEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQD 182
S+ ++C LNLCQ++ A Q
Sbjct: 449 TIKSD--QICKRLNLCQAVTPAFASQ---------------------------------- 520
Query: 183 HPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKN 242
++ C+ C + VS+V T +K + ++ + + ++C L D CK
Sbjct: 521 ---------VHQGNCEACRETVSEVVTKLKDPETKLK-IIRLLLKECKSLN-NYQDKCKK 667
Query: 243 YVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEMM 301
V +Y + + L ++ K++C + C P T ++ +PA+E +
Sbjct: 668 MVFEYGPLMLTDLQKFLEK--KDVCTILHVC------------PGPATHRDYVPAVESL 802
>dbj|D12777.1|RICASPPRO Rice mRNA for aspartic proteinase, complete cds
Length = 1774
Score = 50.8 bits (120), Expect = 3e-04
Identities = 34/126 (26%), Positives = 56/126 (43%), Gaps = 3/126 (2%)
Frame = +1
Query: 357 TKCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXX 416
T+C+EVV +G +L++ I + +P +C +GLC + + + I S
Sbjct: 1009 TECKEVVSEYGEMILNLLIAQTDPQKVCSQVGLC-----MFDGKRSVSNGIES------- 1152
Query: 417 XXXXXXXXXXXXXXXHVPPQKNGG---FCEVCKKPVLYLEHNLEKNSTKEEILAALEKGC 473
V ++N G C VC+ V+++E+ L +N TKE IL + C
Sbjct: 1153 ----------------VVDKENLGSDAMCSVCEMAVVWIENQLRENKTKELILNYANQLC 1284
Query: 474 SFLPDP 479
LP P
Sbjct: 1285 ERLPSP 1302
Score = 36.6 bits (83), Expect = 6.6
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 483 QCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVC 515
+C + V+EY ++L +L+ DP VCS++G+C
Sbjct: 1012 ECKEVVSEYGEMILNLLIAQTDPQKVCSQVGLC 1110
>ref|NM_069043.1| Caenorhabditis elegans
Length = 717
Score = 50.8 bits (120), Expect = 3e-04
Identities = 53/221 (23%), Positives = 91/221 (40%), Gaps = 1/221 (0%)
Frame = +1
Query: 63 CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIK 122
C+ C+ V+ KD EE+ L C ++S + C+ V S L +D ++
Sbjct: 112 CEECENVIKRISEAAKDPKKIEELKIVLGMMCR---ETSYADECRLFV-SQLDKFIDKLQ 279
Query: 123 GEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQD 182
+ NP VC+ L++C + K+++S R++ F
Sbjct: 280 PFLKNPHAVCTRLHIC----------SNKKIDS-------FRRILLEFAK---------- 378
Query: 183 HPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKED-CDRLGPGVSDICK 241
R+Q A VC +C +V +++T V+ S + D ++E+ C LG C
Sbjct: 379 --RAQKTFDAPAIVCDECQFVVKELKTVVEDKKSQAEA-RDFLRENVCKSLGQ-YRGFCD 546
Query: 242 NYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMK 282
VD+Y +Q L + Q P ++CV CN +K
Sbjct: 547 LVVDEYLPQFIQELDAIL-QDPHQVCVDIKACNSASAQGLK 666
Score = 45.1 bits (105), Expect = 0.019
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +1
Query: 58 AKSLPCDICKTVVTEAGNLLKDNATQEEILHYL-EKTCEWIHDSSLSASCKEVVDSYLPV 116
A ++ CD C+ VV E +++D +Q E +L E C+ + C VVD YLP
Sbjct: 400 APAIVCDECQFVVKELKTVVEDKKSQAEARDFLRENVCKSL--GQYRGFCDLVVDEYLPQ 573
Query: 117 ILDMIKGEMSNPGEVCSALNLCQS 140
+ + + +P +VC + C S
Sbjct: 574 FIQELDAILQDPHQVCVDIKACNS 645
>ref|NM_115032.1| Arabidopsis thaliana chromosome 3 CHR3v12152001 genomic sequence
Length = 1097
Score = 50.8 bits (120), Expect = 3e-04
Identities = 46/207 (22%), Positives = 79/207 (37%)
Frame = +3
Query: 316 LCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLDIFI 375
+C C+ + + N T+ +++ L + C+ L ++ +C +V + P L + +
Sbjct: 318 VCTLCEEYVTDALSYLEKNVTQAEIIEDLHDRCSQLRGYSQ-QCISLVDYYVP-LFFLQL 491
Query: 376 HEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXXXXXXXXXXXXXXHVPP 435
P C + LC LVE Q +
Sbjct: 492 ESFQPHYFCKRMNLCGKVVALVEEARQDS------------------------------- 578
Query: 436 QKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLL 495
C VC + V + L+ T+ +I+ L KGC L + Y+K+C V EY PL+
Sbjct: 579 ------CGVCHRTVSEILIKLQDPDTQLDIVELLIKGCKSLKN-YEKKCKTLVFEYGPLI 737
Query: 496 LEILVEVMDPGFVCSKIGVCPSAYKLL 522
L E + VC+ + CP +L
Sbjct: 738 LVNAEEFLVKNDVCTLLRACPPEKSVL 818
>dbj|AB002695.1|AB002695 Pumpkin mRNA for aspartic endopeptidase, complete cds
Length = 1776
Score = 49.7 bits (117), Expect = 8e-04
Identities = 27/129 (20%), Positives = 54/129 (40%)
Frame = +1
Query: 358 KCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXX 417
+C+ VV +G +++D+ + E +P +C I LC + + ++V
Sbjct: 1045 QCKAVVAQYGQTIMDLLLSEADPKKICSQINLCTF--DGTRGVSMGIESVVDENAGKSSD 1218
Query: 418 XXXXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLP 477
+ G C VC+ V+++++ L +N TKE I+ + + C +P
Sbjct: 1219 SL------------------HDGMCSVCEMTVVWMQNQLRQNQTKERIINYINELCDRMP 1344
Query: 478 DPYQKQCDD 486
P + D
Sbjct: 1345 SPMGQSAVD 1371
>gb|AF220198.1|AF220198 Vitis riparia putative protein mRNA, complete cds
Length = 714
Score = 48.9 bits (115), Expect = 0.001
Identities = 27/78 (34%), Positives = 40/78 (50%)
Frame = +2
Query: 63 CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIK 122
C +C+ ++TEA +LL +N TQ+ I+ L TC + S C +VD Y +I +
Sbjct: 17 CIMCERLITEALDLLAENRTQKLIIEMLHATCSEV--QSFKQQCITLVDYYAALIFSEL- 187
Query: 123 GEMSNPGEVCSALNLCQS 140
+ PG C NLC S
Sbjct: 188 -ALITPGNFCEKANLCGS 238
Score = 38.5 bits (88), Expect = 1.7
Identities = 39/203 (19%), Positives = 75/203 (36%)
Frame = +2
Query: 313 NVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPARTKCQEVVGTFGPSLLD 372
N +C C+ ++ + +L+ N T++L+++ L C+ + + +C +V + +L+
Sbjct: 5 NENVCIMCERLITEALDLLAENRTQKLIIEMLHATCSEVQS-FKQQCITLVDYYA-ALIF 178
Query: 373 IFIHEVNPSSLCGVIGLCAARPELVEALEQPAPAIVSALLXXXXXXXXXXXXXXXXXXXH 432
+ + P + C LC +
Sbjct: 179 SELALITPGNFCEKANLCGS--------------------------------------TF 244
Query: 433 VPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYE 492
Q C C+ V+ + L T+ EIL L KGC + +K C V EY
Sbjct: 245 TAGQLYQDSCVFCRMLVMKVLIKLRDPDTQLEILELLLKGCDAVKGLVRK-CKRMVFEYG 421
Query: 493 PLLLEILVEVMDPGFVCSKIGVC 515
P++L ++ VC+ + C
Sbjct: 422 PIILNNTERFLEKNDVCTTVHAC 490
>dbj|AB024999.1|AB024999 Cicer arietinum mRNA for aspartic proteinase, partial cds
Length = 697
Score = 48.5 bits (114), Expect = 0.002
Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Frame = +3
Query: 358 KCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPEL-----VEALEQPAPAIVSALL 412
+C+EVV +G + D+ + VNP +C +GLC+ R + +E + + + +SA
Sbjct: 45 ECKEVVSQYGELIWDLLVSGVNPGDICSQVGLCSVRSDQSKSAGIEMVTENKQSEMSA-- 218
Query: 413 XXXXXXXXXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAALEKG 472
+ C C+ V+++++ L++ +TKE + + +
Sbjct: 219 ------------------------TDTPLCSSCQMLVIWVQNQLKQKATKERVFNYVNQL 326
Query: 473 CSFLPDP 479
C LP P
Sbjct: 327 CESLPSP 347
Score = 43.1 bits (100), Expect = 0.071
Identities = 41/152 (26%), Positives = 65/152 (41%), Gaps = 13/152 (8%)
Frame = +3
Query: 102 LSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEV 161
LS CKEVV Y +I D++ + NPG++CS + LC + + + NK +
Sbjct: 36 LSVECKEVVSQYGELIWDLLVSGV-NPGDICSQVGLCSVRSDQSKSAGIEMVTENK--QS 206
Query: 162 DMARVVAPFMSNIPLLLYPQDHPRSQPQPKAN--EDVCQDCMKLVSDVQTAV-------- 211
+M+ P S+ +L+ + Q K V Q C L S +V
Sbjct: 207 EMSATDTPLCSSCQMLVIWVQNQLKQKATKERVFNYVNQLCESLPSPSGESVISCNDLSR 386
Query: 212 KTNSSFIQG---FVDHVKEDCDRLGPGVSDIC 240
N SF G FV ++ R G G++++C
Sbjct: 387 MPNISFTIGDKPFVLTPEQYVLRTGEGITEVC 482
Score = 41.2 bits (95), Expect = 0.27
Identities = 27/116 (23%), Positives = 50/116 (42%)
Frame = +3
Query: 240 CKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE 299
CK V QY E+ +L+ P +IC G C+ + ++ +E
Sbjct: 48 CKEVVSQYGELIWDLLV--SGVNPGDICSQVGLCS-------------VRSDQSKSAGIE 182
Query: 300 MMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPA 355
M+ +Q+ + A + LC +CQ ++ + AT+E + ++ C LP P+
Sbjct: 183 MVTENKQSEMSATDTPLCSSCQMLVIWVQNQLKQKATKERVFNYVNQLCESLPSPS 350
Score = 36.6 bits (83), Expect = 6.6
Identities = 12/33 (36%), Positives = 25/33 (75%)
Frame = +3
Query: 483 QCDDFVAEYEPLLLEILVEVMDPGFVCSKIGVC 515
+C + V++Y L+ ++LV ++PG +CS++G+C
Sbjct: 45 ECKEVVSQYGELIWDLLVSGVNPGDICSQVGLC 143
>gb|U40853.1|OCU40853 Oryctolagus cuniculus pulmonary surfactant protein B (SP-B) gene,
complete cds
Length = 9064
Score = 48.1 bits (113), Expect = 0.002
Identities = 31/102 (30%), Positives = 46/102 (44%), Gaps = 7/102 (6%)
Frame = +1
Query: 462 KEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEI-----LVEVMDPGFVCS--KIGV 514
K+E + A E+ C F P P+ + V L + L EV DP ++
Sbjct: 2401 KDEAVEA-ERDCRFCPRPHSWWVPEQVGPRTA*LQRVQSQQRLGEVGDPDVASP*LRLPW 2577
Query: 515 CPSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHVW 556
P+A C GP +WCQ++E A +C A+ HC + VW
Sbjct: 2578 PPTAAVWATSPLACAQGPEFWCQSLEQALQCKALGHCLQEVW 2703
>gb|S78114.1|S78114 surfactant protein B [mice, DBA/2J, liver, Genomic/mRNA, 11664 nt]
Length = 11664
Score = 45.8 bits (107), Expect = 0.011
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +1
Query: 507 FVCSKIGVCPSAYKLLLGTEKCVWGPSYWCQNMETAARCNAVDHCKRHVW 556
++ ++ + P+ + +C GP +WCQ++E A +C A+ HC + VW
Sbjct: 2128 WILMRVALTPTPAITSASSLECAQGPQFWCQSLEHAVQCRALGHCLQEVW 2277
>gb|AF076282.1|AF076282 Mustela vison clone SP-B/Short similar to surfactant-associated
protein A mRNA sequence
Length = 1117
Score = 45.8 bits (107), Expect = 0.011
Identities = 20/69 (28%), Positives = 39/69 (55%)
Frame = +2
Query: 71 TEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGE 130
T + K+ Q+ + +LE+ C+ + L C+ ++D+Y PV++D + ++ NP
Sbjct: 5 TSLTKMTKEAIFQDTVRKFLEQECDVLPLKLLVPQCRHLLDTYFPVVIDYFQSQI-NPKV 181
Query: 131 VCSALNLCQ 139
+CS L LC+
Sbjct: 182 ICSHLGLCK 208
Score = 36.2 bits (82), Expect = 8.6
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 337 EELLVKGLSNACALLPDPART-KCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLC 390
++ + K L C +LP +C+ ++ T+ P ++D F ++NP +C +GLC
Sbjct: 41 QDTVRKFLEQECDVLPLKLLVPQCRHLLDTYFPVVIDYFQSQINPKVICSHLGLC 205
>dbj|AB021787.1|AB021787 Pyrus pyrifolia PPFRU11 mRNA for aspartic endopeptidase, partial
cds
Length = 1028
Score = 45.8 bits (107), Expect = 0.011
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Frame = +1
Query: 236 VSDICKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNIL 295
VS CK V+QY + ++ML M QP++IC GFC + + +
Sbjct: 238 VSQECKTVVEQYGKTIIEML--MAKSQPQKICSQIGFC-------------TFDGTRGVS 372
Query: 296 PALE-MMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDP 354
P +E ++D + + C C+ + + N TEE ++ ++ C LP P
Sbjct: 373 PGIESLVDQNPEKQSDGVHDATCAACEMPVVLMQIRLRKNQTEEQILDYVNQLCERLPSP 552
Query: 355 A 355
+
Sbjct: 553 S 555
>dbj|AB070857.1|AB070857 Glycine max sapa mRNA for aspartic proteinase alpha, complete cds
Length = 1861
Score = 45.4 bits (106), Expect = 0.014
Identities = 38/147 (25%), Positives = 64/147 (42%), Gaps = 2/147 (1%)
Frame = +1
Query: 211 VKTNSSFIQGFVDHVKEDCDRLGP-GVSDI-CKNYVDQYSEVCVQMLMHMQDQQPKEICV 268
V + +S + G V E +G GV + CK V QY E+ +L+ +P +IC
Sbjct: 967 VDSGTSLLAGPTPVVAEINHAIGAEGVLSVECKEVVSQYGELIWDLLV--SGVKPDDICS 1140
Query: 269 LAGFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTCQFVMNKFS 328
G C+ KR K+ +EM+ EQ + A + LC +CQ ++
Sbjct: 1141 QVGLCSS-KRHQSKSA------------GIEMVTEKEQEELAARDTPLCSSCQMLVLWIQ 1281
Query: 329 ELIVNNATEELLVKGLSNACALLPDPA 355
+ AT++ + ++ C LP P+
Sbjct: 1282 NQLKQKATKDRVFNYVNQLCESLPSPS 1362
Score = 45.1 bits (105), Expect = 0.019
Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 8/130 (6%)
Frame = +1
Query: 358 KCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARP--------ELVEALEQPAPAIVS 409
+C+EVV +G + D+ + V P +C +GLC+++ E+V EQ A
Sbjct: 1057 ECKEVVSQYGELIWDLLVSGVKPDDICSQVGLCSSKRHQSKSAGIEMVTEKEQEELA--- 1227
Query: 410 ALLXXXXXXXXXXXXXXXXXXXHVPPQKNGGFCEVCKKPVLYLEHNLEKNSTKEEILAAL 469
++ C C+ VL++++ L++ +TK+ + +
Sbjct: 1228 --------------------------ARDTPLCSSCQMLVLWIQNQLKQKATKDRVFNYV 1329
Query: 470 EKGCSFLPDP 479
+ C LP P
Sbjct: 1330 NQLCESLPSP 1359
Score = 38.1 bits (87), Expect = 2.3
Identities = 22/80 (27%), Positives = 40/80 (49%), Gaps = 8/80 (10%)
Frame = +1
Query: 102 LSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQ--------EYLAEQNQKQL 153
LS CKEVV Y +I D++ + P ++CS + LC S + E + E+ Q++L
Sbjct: 1048 LSVECKEVVSQYGELIWDLLVSGV-KPDDICSQVGLCSSKRHQSKSAGIEMVTEKEQEEL 1224
Query: 154 ESNKIPEVDMARVVAPFMSN 173
+ P +++ ++ N
Sbjct: 1225 AARDTPLCSSCQMLVLWIQN 1284
>emb|X56136.1|HVASPROT Barley mRNA for aspartic proteinase
Length = 1800
Score = 44.7 bits (104), Expect = 0.024
Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 2/144 (1%)
Frame = +3
Query: 213 TNSSFIQGFVDHVKEDCDRLGPG--VSDICKNYVDQYSEVCVQMLMHMQDQQPKEICVLA 270
+ +S + G + E +++G VS CK V QY + + +L+ + QPK+IC
Sbjct: 903 SGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLL--AETQPKKICSQV 1076
Query: 271 GFCNEVKRVPMKTLVPATETIKNILPALEMMDPYEQNLVQAHNVILCQTCQFVMNKFSEL 330
G C T + + ++ +P + N ++A +C C+ +
Sbjct: 1077 GLCT----------FDGTRGVSAGIRSVVDDEPVKSNGLRADP--MCSACEMAVVWMQNQ 1220
Query: 331 IVNNATEELLVKGLSNACALLPDP 354
+ N T++L++ ++ C LP P
Sbjct: 1221 LAQNKTQDLILDYVNQLCNRLPSP 1292
>gb|AC012454.8| Homo sapiens BAC clone RP11-439L14 from 2, complete sequence
Length = 185512
Score = 44.3 bits (103), Expect = 0.032
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -2
Query: 528 CVWGPSYWCQNMETAARCNAVDHCKRHVW 556
C GP +WCQ++E A +C A+ HC + VW
Sbjct: 59949 CAQGPEFWCQSLEQALQCRALGHCLQEVW 59863
>gb|AF400074.1|AF400074 Homo sapiens surfactant, pulmonary-associated protein B (SFTPB) gene,
complete cds
Length = 11807
Score = 44.3 bits (103), Expect = 0.032
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 528 CVWGPSYWCQNMETAARCNAVDHCKRHVW 556
C GP +WCQ++E A +C A+ HC + VW
Sbjct: 1215 CAQGPEFWCQSLEQALQCRALGHCLQEVW 1301
>gb|M24461.1|HUMSPBAA Human pulmonary surfactant-associated protein SP-B (SFTP3) mRNA,
complete cds
Length = 10476
Score = 44.3 bits (103), Expect = 0.032
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 528 CVWGPSYWCQNMETAARCNAVDHCKRHVW 556
C GP +WCQ++E A +C A+ HC + VW
Sbjct: 1457 CAQGPEFWCQSLEQALQCRALGHCLQEVW 1543
>gb|L38775.1|PS30007E Pisolithus tinctorius (F00041) mRNA, EST0007
Length = 388
Score = 43.9 bits (102), Expect = 0.041
Identities = 25/78 (32%), Positives = 41/78 (52%)
Frame = +2
Query: 63 CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIK 122
C++C V+E + LKD TQ +I+ L K C + S + CK +V Y P++L
Sbjct: 32 CELCHHAVSEVLDKLKDPDTQMDIIQILLKACNSM--ESYAKKCKRMVFEYGPLVL-ANA 202
Query: 123 GEMSNPGEVCSALNLCQS 140
E +VC+ L+ C++
Sbjct: 203 DEFLEANDVCTTLHACKA 256
Score = 43.1 bits (100), Expect = 0.071
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = +2
Query: 442 CEVCKKPVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDDFVAEYEPLLLEILVE 501
CE+C V + L+ T+ +I+ L K C+ + + Y K+C V EY PL+L E
Sbjct: 32 CELCHHAVSEVLDKLKDPDTQMDIIQILLKACNSM-ESYAKKCKRMVFEYGPLVLANADE 208
Query: 502 VMDPGFVCSKIGVCPSA 518
++ VC+ + C ++
Sbjct: 209 FLEANDVCTTLHACKAS 259
>gb|AY056387.1| Arabidopsis thaliana At1g11910/F12F1_24 mRNA, complete cds
Length = 1874
Score = 43.5 bits (101), Expect = 0.054
Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 3/161 (1%)
Frame = +2
Query: 197 CQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPG--VSDICKNYVDQYSEVCVQM 254
C+ ++D T++ + I ++H +G VS CK VDQY + + +
Sbjct: 881 CESGCSAIADSGTSLLAGPTTIITMINHA------IGAAGVVSQQCKTVVDQYGQTILDL 1042
Query: 255 LMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE-MMDPYEQNLVQAHN 313
L + + QPK+IC G C + + + +E ++D L
Sbjct: 1043 L--LSETQPKKICSQIGLC-------------TFDGTRGVSMGIESVVDKENAKLSNGVG 1177
Query: 314 VILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDP 354
C C+ + + N T+E ++ ++ C LP P
Sbjct: 1178 DAACSACEMAVVWIQSQLRQNMTQERILNYVNELCERLPSP 1300
>gb|AY056403.1| Arabidopsis thaliana At1g11910/F12F1_24 mRNA, complete cds
Length = 1820
Score = 43.5 bits (101), Expect = 0.054
Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 3/161 (1%)
Frame = +2
Query: 197 CQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPG--VSDICKNYVDQYSEVCVQM 254
C+ ++D T++ + I ++H +G VS CK VDQY + + +
Sbjct: 881 CESGCSAIADSGTSLLAGPTTIITMINHA------IGAAGVVSQQCKTVVDQYGQTILDL 1042
Query: 255 LMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE-MMDPYEQNLVQAHN 313
L + + QPK+IC G C + + + +E ++D L
Sbjct: 1043 L--LSETQPKKICSQIGLC-------------TFDGTRGVSMGIESVVDKENAKLSNGVG 1177
Query: 314 VILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDP 354
C C+ + + N T+E ++ ++ C LP P
Sbjct: 1178 DAACSACEMAVVWIQSQLRQNMTQERILNYVNELCERLPSP 1300
>gb|U51036.1|ATU51036 Arabidopsis thaliana aspartic proteinase mRNA, partial cds
Length = 1722
Score = 43.5 bits (101), Expect = 0.054
Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 3/161 (1%)
Frame = +2
Query: 197 CQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPG--VSDICKNYVDQYSEVCVQM 254
C+ ++D T++ + I ++H +G VS CK VDQY + + +
Sbjct: 773 CESGCSAIADSGTSLLAGPTTIITMINHA------IGAAGVVSQQCKTVVDQYGQTILDL 934
Query: 255 LMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE-MMDPYEQNLVQAHN 313
L + + QPK+IC G C + + + +E ++D L
Sbjct: 935 L--LSETQPKKICSQIGLC-------------TFDGTRGVSMGIESVVDKENAKLSNGVG 1069
Query: 314 VILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDP 354
C C+ + + N T+E ++ ++ C LP P
Sbjct: 1070DAACSACEMAVVWIQSQLRQNMTQERILNYVNELCERLPSP 1192
>gb|AY063974.1| Arabidopsis thaliana putative aspartic proteinase (At1g11910) mRNA,
complete cds
Length = 1830
Score = 43.5 bits (101), Expect = 0.054
Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 3/161 (1%)
Frame = +2
Query: 197 CQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPG--VSDICKNYVDQYSEVCVQM 254
C+ ++D T++ + I ++H +G VS CK VDQY + + +
Sbjct: 881 CESGCSAIADSGTSLLAGPTTIITMINHA------IGAAGVVSQQCKTVVDQYGQTILDL 1042
Query: 255 LMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE-MMDPYEQNLVQAHN 313
L + + QPK+IC G C + + + +E ++D L
Sbjct: 1043 L--LSETQPKKICSQIGLC-------------TFDGTRGVSMGIESVVDKENAKLSNGVG 1177
Query: 314 VILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDP 354
C C+ + + N T+E ++ ++ C LP P
Sbjct: 1178 DAACSACEMAVVWIQSQLRQNMTQERILNYVNELCERLPSP 1300
>ref|NM_101062.1| Arabidopsis thaliana chromosome 1 CHR1v12152001 genomic sequence
Length = 1814
Score = 43.5 bits (101), Expect = 0.054
Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 3/161 (1%)
Frame = +2
Query: 197 CQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPG--VSDICKNYVDQYSEVCVQM 254
C+ ++D T++ + I ++H +G VS CK VDQY + + +
Sbjct: 881 CESGCSAIADSGTSLLAGPTTIITMINHA------IGAAGVVSQQCKTVVDQYGQTILDL 1042
Query: 255 LMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE-MMDPYEQNLVQAHN 313
L + + QPK+IC G C + + + +E ++D L
Sbjct: 1043 L--LSETQPKKICSQIGLC-------------TFDGTRGVSMGIESVVDKENAKLSNGVG 1177
Query: 314 VILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDP 354
C C+ + + N T+E ++ ++ C LP P
Sbjct: 1178 DAACSACEMAVVWIQSQLRQNMTQERILNYVNELCERLPSP 1300
>gb|AC006714.3| Caenorhabditis elegans cosmid Y119D3B, complete sequence
Length = 87780
Score = 42.7 bits (99), Expect = 0.092
Identities = 57/272 (20%), Positives = 107/272 (38%), Gaps = 12/272 (4%)
Frame = -1
Query: 23 KTCSGGSAVLCRDVKTAVDCGAVKHCQQMVWSKPTAKSLPCDICKTVVTEAGNLLKDNAT 82
K C+ +LC++V+ K C +M SK AK++ +CK A N+ K
Sbjct: 68727 KKCAKNVRILCKNVQKMC-----KKCAKM--SKKCAKNV-LKLCKNC---AKNVQKCAKI 68581
Query: 83 QEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIKGEMSNPGEVCS--------- 133
+++ ++K C+ + + C +V ++ M K N E+C
Sbjct: 68580 VQKMCKNVQKMCKNVQ--KMCKKCANIVQKCAKIVQKMCKKCARNVQEMCKKCAKNVQK* 68407
Query: 134 ALN---LCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQDHPRSQPQP 190
A N LC+++Q+ L ++ K ++ A++V N+
Sbjct: 68406 AKNVRILCKNVQK-LCKKCAKMCKNCAKNVQKCAKIVQKMCKNVQ--------------- 68275
Query: 191 KANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEV 250
K ++V + C K + VQ K + +V+E C + V +CKN + E
Sbjct: 68274 KMCKNVQKMCKKCANIVQKCAKIVQKMCKKCARNVQEMCKKCAKNVQKMCKN-EQKMCEY 68098
Query: 251 CVQMLMHMQDQQPKEICVLAGFCNEVKRVPMK 282
C +M + K ++ C V+++ K
Sbjct: 68097 CAKMCKNCAKNVQKCAKIVQKMCKNVQKMCKK 68002
>ref|NM_069046.1| Caenorhabditis elegans
Length = 1209
Score = 42.7 bits (99), Expect = 0.092
Identities = 56/301 (18%), Positives = 107/301 (34%), Gaps = 3/301 (0%)
Frame = +1
Query: 63 CDICKTVVTEAGNLLKDNATQEEILHYLEK-TCEWIHDSSLSASCKEVVDSYLPVILDMI 121
CD C+ + G L+ D T + L++ C+ +C V S +P ++ +
Sbjct: 385 CDECQASTAQIGKLVGDEFTTYAVKSTLQRFVCK--SAGKAHKACNIFVSSVIPDLMTEM 558
Query: 122 KGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYPQ 181
K + +CS + LC + + A + KQ S + M +
Sbjct: 559 KDMFTEKELMCSNMGLCSATSKPAAREAPKQPASEMWKSMGMVKT--------------- 693
Query: 182 DHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKE-DCDRLGPGVSDIC 240
+N + C + ++ QG D ++ C+++ +D C
Sbjct: 694 ----------SNGEELMSCFECTLSADALLQEFIDKRQGTADDIQTVACNKMVANWTDGC 843
Query: 241 KNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALEM 300
++V Y + + + D + G C T++ + E +N L + M
Sbjct: 844 NDFVHMYMSTVLFLTYNQFDGR--------GIC---------TMMHSCEKKENALVEMAM 972
Query: 301 MDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGL-SNACALLPDPARTKC 359
+ ++ C+ C+ V + F++ A V GL SN C LP T C
Sbjct: 973 SEKV---------MLGCENCKAVEHFFAQ--NQEALHSHAVDGLYSNVCQKLPTALGTMC 1119
Query: 360 Q 360
+
Sbjct: 1120E 1122
>gb|AF196308.1|AF196308 Naegleria fowleri naegleriapore A precursor (NP-A) gene, partial
cds
Length = 1097
Score = 40.8 bits (94), Expect = 0.35
Identities = 28/108 (25%), Positives = 47/108 (42%), Gaps = 22/108 (20%)
Frame = +1
Query: 55 KPTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYL 114
K TA C+ICK V+ + ++ N +Q EI L K C + S + +C + +
Sbjct: 391 KATAGDAECEICKFVIQQVEAFIESNHSQAEIQKELNKLCSSV-PSIFTQTCLSIA-RMV 564
Query: 115 PVILDMIK----------------------GEMSNPGEVCSALNLCQS 140
P I+ ++ E ++PG+VC L+LC+S
Sbjct: 565 PYIIKKLEVS*SVLYLRNTNNVNHHRSIDLQEHNSPGQVCQGLHLCKS 708
>emb|X77260.1|BOASPR B. oleracea L. gene for aspartic protease (partial)
Length = 1121
Score = 40.8 bits (94), Expect = 0.35
Identities = 39/193 (20%), Positives = 73/193 (37%), Gaps = 12/193 (6%)
Frame = +1
Query: 197 CQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPG--VSDICKNYVDQYSEVCVQM 254
C+ ++D T++ + I ++H +G S CK VDQY + + +
Sbjct: 190 CESGCSAIADSGTSLLAGPTTIITMINHA------IGASGVASQQCKTVVDQYGQTILDL 351
Query: 255 LMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPALE-MMDPYEQNLVQAHN 313
L + + QPK+IC G C + + + +E ++D L
Sbjct: 352 L--LSETQPKKICSQIGLC-------------TFDGKRGVSMGIESVVDKENAKLSNGVG 486
Query: 314 VILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDP---ARTKCQE------VVG 364
C C+ + + N T+E ++ ++ C +P P + C + V
Sbjct: 487 DAACSACEMAVVWIQSQLRQNMTQERILDYVNELCRRIPSPMGESAVDCAQLSTMPTVSL 666
Query: 365 TFGPSLLDIFIHE 377
T G + D+ HE
Sbjct: 667 TIGGKVFDLAPHE 705
>gb|AF362767.1|AF362767 Paragonimus westermani clone NJS459 unknown mRNA
Length = 394
Score = 40.4 bits (93), Expect = 0.46
Identities = 22/79 (27%), Positives = 39/79 (48%)
Frame = +2
Query: 63 CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIK 122
CD+CK V + LK Q+ + ++L K C+ + S + CK+ + + + D I
Sbjct: 83 CDVCKQTVKTLQDGLKTGILQQLLENFLTKQCDSL--GSFAKVCKKAISKGITFLSDQI- 253
Query: 123 GEMSNPGEVCSALNLCQSL 141
+ P E C ++LC +L
Sbjct: 254 -QKREPEETCKKIHLC*TL 307
>emb|Y09123.1|CCY09123 C.calcitrapa mRNA for aspartic proteinase
Length = 1721
Score = 40.0 bits (92), Expect = 0.60
Identities = 31/131 (23%), Positives = 55/131 (41%)
Frame = +2
Query: 102 LSASCKEVVDSYLPVILDMIKGEMSNPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEV 161
+S CK +VD Y I++M+ E + P ++CS + LC
Sbjct: 980 MSQQCKTLVDQYGKTIIEMLLSE-AQPDKICSQMKLC---------------------TF 1093
Query: 162 DMARVVAPFMSNIPLLLYPQDHPRSQPQPKANEDVCQDCMKLVSDVQTAVKTNSSFIQGF 221
D AR V+ + ++ D + ++++C C V +Q +K N +
Sbjct: 1094 DGARDVSSIIESV------VDKNNGKSSGGVHDEMCTFCEMAVVWMQNQIKRNQT-EDNI 1252
Query: 222 VDHVKEDCDRL 232
+++V E CDRL
Sbjct: 1253 INYVNELCDRL 1285
Score = 37.4 bits (85), Expect = 3.9
Identities = 26/119 (21%), Positives = 48/119 (39%)
Frame = +2
Query: 236 VSDICKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNIL 295
+S CK VDQY + ++ML + + QP +IC C + +++ + N
Sbjct: 980 MSQQCKTLVDQYGKTIIEML--LSEAQPDKICSQMKLCTFDGARDVSSIIESVVDKNNGK 1153
Query: 296 PALEMMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDP 354
+ + D +C C+ + I N TE+ ++ ++ C LP P
Sbjct: 1154 SSGGVHDE------------MCTFCEMAVVWMQNQIKRNQTEDNIINYVNELCDRLPSP 1294
>emb|X69193.1|VCCYNA V.cardunculus mRNA for cynarase
Length = 1603
Score = 40.0 bits (92), Expect = 0.60
Identities = 28/119 (23%), Positives = 51/119 (42%)
Frame = +3
Query: 236 VSDICKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNIL 295
+S CK+ VDQY + ++ML+ ++QP++IC C+ ++ +
Sbjct: 846 MSQQCKSLVDQYGKSMIEMLL--SEEQPEKICSQMKLCSFDGSHDTSMIIES-------- 995
Query: 296 PALEMMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDP 354
++D + H+ +C CQ + I N TEE ++ + C LP P
Sbjct: 996 ----VVDKSKGKSSGLHDE-MCTMCQMAVVWMQNQIRQNETEENIINYVDKLCERLPSP 1157
>dbj|AB025359.2|AB025359 Helianthus annuus mRNA for aspartic proteinase, complete cds
Length = 1722
Score = 38.9 bits (89), Expect = 1.3
Identities = 25/119 (21%), Positives = 49/119 (41%)
Frame = +2
Query: 236 VSDICKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNIL 295
+S CK VDQY + ++ML + + QP +IC C + + +I+
Sbjct: 962 MSQQCKTLVDQYGKTIIEML--LSEAQPDKICSRMNLCT----------FDGSRDVSSII 1105
Query: 296 PALEMMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDP 354
+ ++D N +C C+ + + N TE+ ++ ++ C +P P
Sbjct: 1106 ES--VVDKNNGKSSAGLNDGICAFCEMAVVWMQSQLKRNQTEDSIINYVNELCDRIPSP 1276
>gb|AF211857.1|AF211857 Ovis aries pulmonary surfactant protein B (SPBS) mRNA, partial cds
Length = 816
Score = 38.5 bits (88), Expect = 1.7
Identities = 62/286 (21%), Positives = 104/286 (35%), Gaps = 9/286 (3%)
Frame = +1
Query: 127 NPGEVCSALNLCQSLQEYLAEQNQKQLESNKIPEVDMARVVAPFMSNIPLLLYP---QDH 183
NP +C + LC+ + E K PE P + + L L P Q
Sbjct: 1 NPKFICQHVGLCKP----------RHPEPGKGPEP-----WGPLLDKMALPLLPGALQAK 135
Query: 184 PRSQPQPKANE------DVCQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVS 237
P Q Q + + C C L+ +Q + + V + C + V
Sbjct: 136 PGPQTQDLSQQRFPIPLPFCWLCRTLIKRIQAVIPKGVLAMT-----VAQVCHVVPLLVG 300
Query: 238 DICKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNILPA 297
IC+ V++YS + + L+ P+ +C L C+ + ++ LPA
Sbjct: 301 GICQCLVERYSVILLDTLLGRM--LPQLVCGLVLRCS------------SEDSAGPALPA 438
Query: 298 LEMMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDPART 357
L + P E V CQ C FV + N++E+ + + + AC L R
Sbjct: 439 LGSL-PGEW----LPQVSECQLCMFVTTQ-----AGNSSEQAMPQAMRQAC-LGTWLDRQ 585
Query: 358 KCQEVVGTFGPSLLDIFIHEVNPSSLCGVIGLCAARPELVEALEQP 403
KC++ V P L + + C +G CA ++ + P
Sbjct: 586 KCEQFVEEHAPRLQTLVSSGWDAHMACQALGTCATPFSPLQCIHSP 723
>gb|M60259.1|HUMSAPE1 Human mutant cerebroside sulfate activator protein (SAP-MU) gene,
exon with mutation
Length = 704
Score = 38.5 bits (88), Expect = 1.7
Identities = 14/23 (60%), Positives = 19/23 (81%)
Frame = +3
Query: 236 VSDICKNYVDQYSEVCVQMLMHM 258
+S CKNY+ QYSE+ +QM+MHM
Sbjct: 246 LSPQCKNYISQYSEIAIQMMMHM 314
>dbj|AB045891.1|AB045891 Nepenthes alata NaAP1 mRNA for aspartic proteinase 1, complete cds
Length = 1802
Score = 38.1 bits (87), Expect = 2.3
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 4/123 (3%)
Frame = +2
Query: 236 VSDICKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCN-EVKR---VPMKTLVPATETI 291
VS CK V QY + ML+ + QPK+IC G C + KR V +K++V
Sbjct: 1049 VSQECKAVVAQYGTAILDMLI--SETQPKKICSQIGLCTFDGKRGVSVGIKSVVDMN--- 1213
Query: 292 KNILPALEMMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALL 351
+D L A C C+ + + N TEE ++ ++ C L
Sbjct: 1214 ---------VDGSSSGLQDA----TCTACEMTVVWMQNQLKQNQTEERILNYVNELCNRL 1354
Query: 352 PDP 354
P P
Sbjct: 1355 PSP 1363
>dbj|AB069959.1|AB069959 Glycine max sapd mRNA for aspartic proteinase delta, complete cds
Length = 1719
Score = 38.1 bits (87), Expect = 2.3
Identities = 24/119 (20%), Positives = 49/119 (41%)
Frame = +1
Query: 236 VSDICKNYVDQYSEVCVQMLMHMQDQQPKEICVLAGFCNEVKRVPMKTLVPATETIKNIL 295
+S CK V +Y + + +L+ + QPK+IC G C T + +
Sbjct: 961 MSQECKTIVAEYGQTILDLLL--AETQPKKICSRIGLC----------AFDGTHGVD--V 1098
Query: 296 PALEMMDPYEQNLVQAHNVILCQTCQFVMNKFSELIVNNATEELLVKGLSNACALLPDP 354
++D E+ + H+ C C+ + + N T++ ++ ++ C +P P
Sbjct: 1099 GIKSVVDENERKSLGGHHGAACPACEMAVVWMQNQLSRNQTQDQILSYINQLCDKMPSP 1275
>gb|AF175577.1|AF175577 Tripedalia cystophora J3-crystallin mRNA, complete cds
Length = 1787
Score = 38.1 bits (87), Expect = 2.3
Identities = 23/90 (25%), Positives = 48/90 (52%), Gaps = 3/90 (3%)
Frame = +2
Query: 442 CEVCKKPVLYLEHNLEK-NSTKEEILAALEKGCSFLPD--PYQKQCDDFVAEYEPLLLEI 498
C++C+ + ++ +L N T+ EI + C F+ QK+C++ V + E + +
Sbjct: 473 CDICRATIQIVDSSLAIFNYTELEIDKLVMLSCKFMSSWGSVQKECENIVRQVERVE-RL 649
Query: 499 LVEVMDPGFVCSKIGVCPSAYKLLLGTEKC 528
L++ + PG VC+ +G C + + + T +C
Sbjct: 650 LMKDLSPGDVCAVLGYCNYSKESVDQTAEC 739
>ref|NM_077493.1| sphingomyelin phosphodiesterase
Length = 1719
Score = 37.4 bits (85), Expect = 3.9
Identities = 18/81 (22%), Positives = 38/81 (46%)
Frame = +1
Query: 54 SKPTAKSLPCDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSY 113
++P + + C C V L+ N+T EI +L C+ + D CK ++ ++
Sbjct: 187 NEPENRKMSCLFCTFAVDGVQALIAQNSTDNEIAAFLVNLCD-LFDVEQPHVCKNIIYAF 363
Query: 114 LPVILDMIKGEMSNPGEVCSA 134
++ +++ + P E+C A
Sbjct: 364 KDEVVFVLERSVFTPEEICGA 426
>dbj|AB016728.1|AB016728 Dictyostelium discoideum sapA mRNA for saposin A, complete cds
Length = 650
Score = 36.2 bits (82), Expect = 8.6
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = +2
Query: 197 CQDCMKLVSDVQTAVKTNSSFIQGFVDHVKEDCDRLGPGVSDICKNYVDQYSEVCVQMLM 256
CQ C LV D+ + N S ++ + CD + V +CK +VD + VQ +
Sbjct: 278 CQICELLVKDIIEGLTANQS-VEVIEHGLNLICDHIPLHVR-VCKQFVDSNFQKIVQFIE 451
Query: 257 HMQDQQPKEICVLAGFC 273
+ D P+EIC G C
Sbjct: 452 NHDD--PQEICEKCGVC 496
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 19, 2002 12:00 AM
Number of letters in database: 587,334,133
Number of sequences in database: 1,164,257
Lambda K H
0.319 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,679,104,960
Number of Sequences: 1164257
Number of extensions: 63286499
Number of successful extensions: 248370
Number of sequences better than 10.0: 192
Number of HSP's better than 10.0 without gapping: 48977
Number of HSP's successfully gapped in prelim test: 10087
Number of HSP's that attempted gapping in prelim test: 158167
Number of HSP's gapped (non-prelim): 141669
length of query: 557
length of database: 1,627,433,809
effective HSP length: 140
effective length of query: 417
effective length of database: 1,464,437,829
effective search space: 610670574693
effective search space used: 610670574693
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)