TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(457 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,164,257 sequences; 587,334,133 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
gb|M36850.1|MUSL3T4AA Mouse T-cell differentiation antigen ... 781 0.0
gb|M13816.1|MUSATCL3T Mouse T-cell surface antigen L3T4 mRN... 781 0.0
ref|NM_013488.1| Mus musculus CD4 antigen (Cd4), mRNA 781 0.0
emb|X04836.1|MMCD4R Mouse mRNA for T-cell surface glycoprot... 781 0.0
gb|AF045882.1|AF045882 Mus musculus T4 surface glycoprotein... 771 0.0
ref|NM_012705.1| Rattus norvegicus CD4 antigen (p55) (Cd4),... 576 e-162
gb|M15768.1|RATCD4A Rat W3/25 antigen (homologue of human C... 576 e-162
gb|M92840.1|RABCD4 Oryctolagus cuniculus cell surface glyco... 399 e-109
ref|NM_000616.1| Homo sapiens CD4 antigen (p55) (CD4), mRNA 387 e-105
gb|M12807.1|HUMATCT4 Human T-cell surface glycoprotein T4 m... 387 e-105
ref|XM_006966.2| Homo sapiens CD4 antigen (p55) (CD4), mRNA 387 e-105
gb|M35160.1|HUMATCT4A Human T4 surface glycoprotein CD4 gen... 385 e-105
dbj|D86589.1|D86589 African green monkey mRNA for CD4, comp... 384 e-104
dbj|D63348.1|D63348 Macaca fuscata mRNA for precursor CD4, ... 383 e-104
gb|M31135.1|CHPCD4A Chimpanzee lymphocyte antigen CD4 mRNA,... 382 e-104
gb|M31134.1|MACCD4A Rhesus monkey lymphocyte antigen CD4 mR... 382 e-104
dbj|D63346.1|D63346 Macaca nemestrina mRNA for precursor CD... 380 e-103
dbj|D63347.1|MACCD4 Rhesus monkey mRNA for CD4, complete cds 380 e-103
dbj|D86588.1|D86588 Squirrel monkey mRNA for CD4, complete cds 378 e-103
dbj|D63349.1|D63349 Macaca fascicularis mRNA for CD4 precur... 378 e-103
gb|AF071799.1|AF071799 Delphinapterus leucas T-cell surface... 363 1e-98
dbj|AB000483.1|AB000483 Felis catus mRNA for CD4 antigen, c... 360 1e-97
gb|L06130.1|DOGCD4 Canis familiaris CD4 antigen mRNA, compl... 332 4e-89
gb|AF001225.1|AF001225 Cercopithecus sabaeus CD4 (CD4) mRNA... 322 6e-86
emb|X73327.1|CACD41 C.atys CD4 mRNA 1 322 6e-86
gb|AF001228.1| Cercopithecus aethiops (Barbados) CD4 (CD4) ... 321 8e-86
gb|AF001227.1|AF001227 Cercopithecus pygerythrus CD4 (CD4) ... 321 8e-86
emb|X73322.1|CACD4 C.aethiops CD4 mRNA 321 8e-86
emb|X73323.1|PTCD4 P.troglodytes CD4 mRNA 321 1e-85
emb|X73324.1|EPCD4 E.patas CD4 mRNA 321 1e-85
gb|AF001223.1|AF001223 Cercopithecus sabaeus CD4 (CD4) mRNA... 320 1e-85
gb|AF001224.1|AF001224 Cercopithecus sabaeus CD4 (CD4) mRNA... 320 2e-85
gb|AF001222.1|AF001222 Cercopithecus tantalus CD4 (CD4) mRN... 320 2e-85
gb|AF001226.1|AF001226 Cercopithecus aethiops CD4 (CD4) mRN... 319 3e-85
gb|AF001221.1|AF001221 Cercopithecus tantalus CD4 (CD4) mRN... 319 4e-85
emb|X73325.1|MNCD4 M.nemestrina CD4 mRNA 318 9e-85
emb|X73326.1|MMCD4 M.mulatta CD4 mRNA 317 1e-84
emb|X73328.1|CACD42 C.atys CD4 mRNA 2 313 2e-83
emb|X68565.1|CFCD4 C.familiaris mRNA for T-cell surface gly... 301 1e-79
gb|M17078.1|MUSCD44 Mouse T-cell differentiation antigen CD... 225 8e-57
gb|AC002397.1|AC002397 Mouse chromosome 6 BAC-284H12 (Resea... 225 8e-57
gb|M36851.1|MUSL3T4AB Mouse T-cell differentiation antigen ... 225 8e-57
gb|U75219.1|MMU75219 Mus musculus mutant T-cell surface gly... 151 5e-37
gb|M20265.1|MUSTCSGA Mouse MHC class II T-cell surface glyc... 151 1e-34
gb|M17079.1|MUSCD45 Mouse T-cell differentiation antigen CD... 135 8e-30
gb|U47924.1|HSU47924 Human chromosome 12p13 sequence, compl... 120 2e-25
gb|M17077.1|MUSCD43 Mouse T-cell differentiation antigen CD... 116 4e-24
gb|M17076.1|MUSCD42 Mouse T-cell differentiation antigen CD... 107 2e-21
gb|AF082497.1|AF082497 Marmota monax T-cell surface glycopr... 105 9e-21
emb|Y12012.1|GGCD4 G.gallus CD4 mRNA 100 2e-19
gb|AF378701.1|AF378701 Anas platyrhynchos T-cell surface gl... 97 3e-18
emb|X65629.1|SSCD41 S.scrofa mRNA for CD4 molecule (allele ... 97 4e-18
emb|X65630.1|SSCD42 S.scrofa mRNA for CD4 molecule (allele ... 96 7e-18
emb|X87579.1|HSCD4ALU H.sapiens CD4 gene 56 6e-06
gb|S79267.1|S79267 CD4 receptor {exons 1 and 2} [human, T-l... 56 6e-06
gb|M17080.1|MUSCD46 Mouse T-cell differentiation antigen CD... 50 4e-04
emb|AL591520.5|AL591520 Zebrafish DNA sequence from clone X... 50 6e-04
emb|AL591597.8|AL591597 Zebrafish DNA sequence from clone X... 48 0.002
emb|AL591511.2|AL591511 Zebrafish DNA sequence from clone X... 47 0.004
gb|U40625.1|HSU40625 Human surface glycoprotein variant (CD... 41 0.21
gb|AF029989.1|AF029989 Homo sapiens immunoglobulin light ch... 40 0.35
gb|U75218.1|MMU75218 Mus musculus mutant T-cell surface gly... 39 1.3
gb|M14362.1|HUMATCCD2 Human T-cell surface antigen CD2 (T11... 38 1.7
ref|NM_001767.1| Homo sapiens CD2 antigen (p50), sheep red ... 38 1.7
gb|M16445.1|HUMANTCD2 Human surface antigen CD2 mRNA, compl... 38 1.7
gb|M16336.1|HUMCD2A Human T-cell surface antigen CD2 (T11) ... 38 1.7
gb|L40650.1|HUMIKCJ Homo sapiens (clone BCPBL2-2) immunoglo... 37 5.1
dbj|AK025940.1|AK025940 Homo sapiens cDNA: FLJ22287 fis, cl... 37 5.1
ref|XM_052054.4| Homo sapiens Downs syndrome cell adhesion ... 36 6.6
dbj|AB032958.1|AB032958 Homo sapiens mRNA for KIAA1132 prot... 36 6.6
dbj|AP002342.3|AP002342 Homo sapiens genomic DNA, chromosom... 36 6.6
gb|AF334384.1|AF334384 Homo sapiens Down syndrome cell adhe... 36 6.6
emb|Z00021.1|HSIGK20 H.sapiens rearranged DNA for kappa imm... 36 8.6
>gb|M36850.1|MUSL3T4AA Mouse T-cell differentiation antigen CD4 (L3T4) mRNA, complete cds
Length = 1417
Score = 781 bits (2017), Expect = 0.0
Identities = 398/457 (87%), Positives = 398/457 (87%)
Frame = +1
Query: 1 MCRAIXXXXXXXXXXXXXXXXAVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQR 60
MCRAI AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQR
Sbjct: 40 MCRAISLRRLLLLLLQLSQLLAVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQR 219
Query: 61 KILGQHGKGVLIRGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEE 120
KILGQHGKGVLIRGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEE
Sbjct: 220 KILGQHGKGVLIRGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEE 399
Query: 121 VELWVFKVTFSPXXXXXXXXXXXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRV 180
VELWVFKVTFSP DSNSKVSNPLTECKH LSMSNLRV
Sbjct: 400 VELWVFKVTFSPGTSLLQGQSLTLTLDSNSKVSNPLTECKHKKGKVVSGSKVLSMSNLRV 579
Query: 181 QDSDFWNCTVTLDQKKNWFGMTLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGEL 240
QDSDFWNCTVTLDQKKNWFGMTLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGEL
Sbjct: 580 QDSDFWNCTVTLDQKKNWFGMTLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGEL 759
Query: 241 MWKAEKDSFFQPWISFSIKNKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLT 300
MWKAEKDSFFQPWISFSIKNKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLT
Sbjct: 760 MWKAEKDSFFQPWISFSIKNKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLT 939
Query: 301 LTLDKGTLHQEVNLVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQV 360
LTLDKGTLHQEVNLVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQV
Sbjct: 940 LTLDKGTLHQEVNLVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQV 1119
Query: 361 VAPETGLWQCLLSEGDKVKMDSRIQVLSRGVNQTVFLACVXXXXXXXXXXXXXXXXXXVR 420
VAPETGLWQCLLSEGDKVKMDSRIQVLSRGVNQTVFLACV VR
Sbjct: 1120VAPETGLWQCLLSEGDKVKMDSRIQVLSRGVNQTVFLACVLGGSFGFLGFLGLCILCCVR 1299
Query: 421 CRHQQRQAARMSQIKRLLSEKKTCQCPHRMQKSHNLI 457
CRHQQRQAARMSQIKRLLSEKKTCQCPHRMQKSHNLI
Sbjct: 1300CRHQQRQAARMSQIKRLLSEKKTCQCPHRMQKSHNLI 1410
>gb|M13816.1|MUSATCL3T Mouse T-cell surface antigen L3T4 mRNA, complete cds
Length = 1417
Score = 781 bits (2017), Expect = 0.0
Identities = 398/457 (87%), Positives = 398/457 (87%)
Frame = +1
Query: 1 MCRAIXXXXXXXXXXXXXXXXAVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQR 60
MCRAI AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQR
Sbjct: 40 MCRAISLRRLLLLLLQLSQLLAVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQR 219
Query: 61 KILGQHGKGVLIRGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEE 120
KILGQHGKGVLIRGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEE
Sbjct: 220 KILGQHGKGVLIRGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEE 399
Query: 121 VELWVFKVTFSPXXXXXXXXXXXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRV 180
VELWVFKVTFSP DSNSKVSNPLTECKH LSMSNLRV
Sbjct: 400 VELWVFKVTFSPGTSLLQGQSLTLTLDSNSKVSNPLTECKHKKGKVVSGSKVLSMSNLRV 579
Query: 181 QDSDFWNCTVTLDQKKNWFGMTLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGEL 240
QDSDFWNCTVTLDQKKNWFGMTLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGEL
Sbjct: 580 QDSDFWNCTVTLDQKKNWFGMTLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGEL 759
Query: 241 MWKAEKDSFFQPWISFSIKNKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLT 300
MWKAEKDSFFQPWISFSIKNKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLT
Sbjct: 760 MWKAEKDSFFQPWISFSIKNKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLT 939
Query: 301 LTLDKGTLHQEVNLVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQV 360
LTLDKGTLHQEVNLVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQV
Sbjct: 940 LTLDKGTLHQEVNLVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQV 1119
Query: 361 VAPETGLWQCLLSEGDKVKMDSRIQVLSRGVNQTVFLACVXXXXXXXXXXXXXXXXXXVR 420
VAPETGLWQCLLSEGDKVKMDSRIQVLSRGVNQTVFLACV VR
Sbjct: 1120VAPETGLWQCLLSEGDKVKMDSRIQVLSRGVNQTVFLACVLGGSFGFLGFLGLCILCCVR 1299
Query: 421 CRHQQRQAARMSQIKRLLSEKKTCQCPHRMQKSHNLI 457
CRHQQRQAARMSQIKRLLSEKKTCQCPHRMQKSHNLI
Sbjct: 1300CRHQQRQAARMSQIKRLLSEKKTCQCPHRMQKSHNLI 1410
>ref|NM_013488.1| Mus musculus CD4 antigen (Cd4), mRNA
Length = 3100
Score = 781 bits (2017), Expect = 0.0
Identities = 398/457 (87%), Positives = 398/457 (87%)
Frame = +2
Query: 1 MCRAIXXXXXXXXXXXXXXXXAVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQR 60
MCRAI AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQR
Sbjct: 170 MCRAISLRRLLLLLLQLSQLLAVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQR 349
Query: 61 KILGQHGKGVLIRGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEE 120
KILGQHGKGVLIRGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEE
Sbjct: 350 KILGQHGKGVLIRGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEE 529
Query: 121 VELWVFKVTFSPXXXXXXXXXXXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRV 180
VELWVFKVTFSP DSNSKVSNPLTECKH LSMSNLRV
Sbjct: 530 VELWVFKVTFSPGTSLLQGQSLTLTLDSNSKVSNPLTECKHKKGKVVSGSKVLSMSNLRV 709
Query: 181 QDSDFWNCTVTLDQKKNWFGMTLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGEL 240
QDSDFWNCTVTLDQKKNWFGMTLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGEL
Sbjct: 710 QDSDFWNCTVTLDQKKNWFGMTLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGEL 889
Query: 241 MWKAEKDSFFQPWISFSIKNKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLT 300
MWKAEKDSFFQPWISFSIKNKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLT
Sbjct: 890 MWKAEKDSFFQPWISFSIKNKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLT 1069
Query: 301 LTLDKGTLHQEVNLVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQV 360
LTLDKGTLHQEVNLVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQV
Sbjct: 1070LTLDKGTLHQEVNLVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQV 1249
Query: 361 VAPETGLWQCLLSEGDKVKMDSRIQVLSRGVNQTVFLACVXXXXXXXXXXXXXXXXXXVR 420
VAPETGLWQCLLSEGDKVKMDSRIQVLSRGVNQTVFLACV VR
Sbjct: 1250VAPETGLWQCLLSEGDKVKMDSRIQVLSRGVNQTVFLACVLGGSFGFLGFLGLCILCCVR 1429
Query: 421 CRHQQRQAARMSQIKRLLSEKKTCQCPHRMQKSHNLI 457
CRHQQRQAARMSQIKRLLSEKKTCQCPHRMQKSHNLI
Sbjct: 1430CRHQQRQAARMSQIKRLLSEKKTCQCPHRMQKSHNLI 1540
>emb|X04836.1|MMCD4R Mouse mRNA for T-cell surface glycoprotein CD4 (L3T4)
Length = 3100
Score = 781 bits (2017), Expect = 0.0
Identities = 398/457 (87%), Positives = 398/457 (87%)
Frame = +2
Query: 1 MCRAIXXXXXXXXXXXXXXXXAVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQR 60
MCRAI AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQR
Sbjct: 170 MCRAISLRRLLLLLLQLSQLLAVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQR 349
Query: 61 KILGQHGKGVLIRGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEE 120
KILGQHGKGVLIRGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEE
Sbjct: 350 KILGQHGKGVLIRGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEE 529
Query: 121 VELWVFKVTFSPXXXXXXXXXXXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRV 180
VELWVFKVTFSP DSNSKVSNPLTECKH LSMSNLRV
Sbjct: 530 VELWVFKVTFSPGTSLLQGQSLTLTLDSNSKVSNPLTECKHKKGKVVSGSKVLSMSNLRV 709
Query: 181 QDSDFWNCTVTLDQKKNWFGMTLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGEL 240
QDSDFWNCTVTLDQKKNWFGMTLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGEL
Sbjct: 710 QDSDFWNCTVTLDQKKNWFGMTLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGEL 889
Query: 241 MWKAEKDSFFQPWISFSIKNKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLT 300
MWKAEKDSFFQPWISFSIKNKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLT
Sbjct: 890 MWKAEKDSFFQPWISFSIKNKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLT 1069
Query: 301 LTLDKGTLHQEVNLVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQV 360
LTLDKGTLHQEVNLVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQV
Sbjct: 1070LTLDKGTLHQEVNLVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQV 1249
Query: 361 VAPETGLWQCLLSEGDKVKMDSRIQVLSRGVNQTVFLACVXXXXXXXXXXXXXXXXXXVR 420
VAPETGLWQCLLSEGDKVKMDSRIQVLSRGVNQTVFLACV VR
Sbjct: 1250VAPETGLWQCLLSEGDKVKMDSRIQVLSRGVNQTVFLACVLGGSFGFLGFLGLCILCCVR 1429
Query: 421 CRHQQRQAARMSQIKRLLSEKKTCQCPHRMQKSHNLI 457
CRHQQRQAARMSQIKRLLSEKKTCQCPHRMQKSHNLI
Sbjct: 1430CRHQQRQAARMSQIKRLLSEKKTCQCPHRMQKSHNLI 1540
>gb|AF045882.1|AF045882 Mus musculus T4 surface glycoprotein precursor, mRNA, partial cds
Length = 1299
Score = 771 bits (1992), Expect = 0.0
Identities = 390/433 (90%), Positives = 390/433 (90%)
Frame = +1
Query: 25 QGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFD 84
QGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFD
Sbjct: 1 QGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFD 180
Query: 85 SKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXXXX 144
SKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSP
Sbjct: 181 SKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPGTSLLQGQSLTL 360
Query: 145 XXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLS 204
DSNSKVSNPLTECKH LSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLS
Sbjct: 361 TLDSNSKVSNPLTECKHKKGKVVSGSKVLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLS 540
Query: 205 VLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVS 264
VLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVS
Sbjct: 541 VLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVS 720
Query: 265 VQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMKVAQLNN 324
VQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMKVAQLNN
Sbjct: 721 VQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMKVAQLNN 900
Query: 325 TLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRI 384
TLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRI
Sbjct: 901 TLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRI 1080
Query: 385 QVLSRGVNQTVFLACVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARMSQIKRLLSEKKTC 444
QVLSRGVNQTVFLACV VRCRHQQRQAARMSQIKRLLSEKKTC
Sbjct: 1081QVLSRGVNQTVFLACVLGGSFAFLGFLGLCILCCVRCRHQQRQAARMSQIKRLLSEKKTC 1260
Query: 445 QCPHRMQKSHNLI 457
QCPHRMQKSHNLI
Sbjct: 1261QCPHRMQKSHNLI 1299
>ref|NM_012705.1| Rattus norvegicus CD4 antigen (p55) (Cd4), mRNA
Length = 1749
Score = 576 bits (1484), Expect = e-162
Identities = 297/436 (68%), Positives = 337/436 (77%), Gaps = 1/436 (0%)
Frame = +3
Query: 23 VTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDR 82
VTQGKT+VLGKEG SAELPCES+ ++ F WK SDQ+ ILG K L+ GS + R
Sbjct: 123 VTQGKTVVLGKEGGSAELPCESTSRRSASFAWKSSDQKTILGYKNK--LLIKGSLELYSR 296
Query: 83 FDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXX 142
FDS+K AWE+GSFPLIINKL+MEDSQTY+CELEN+KEEVELWVF+VTF+P
Sbjct: 297 FDSRKNAWERGSFPLIINKLRMEDSQTYVCELENKKEEVELWVFRVTFNPGTRLLQGQSL 476
Query: 143 XXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMT 202
DSN KVS+P ECKH S +LR+QDS WNCTVTL+QKK+ F M
Sbjct: 477 TLILDSNPKVSDPPIECKHKSSNIVKDSKAFSTHSLRIQDSGIWNCTVTLNQKKHSFDMK 656
Query: 203 LSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKE 262
LSVLGF ST+ITAYKSEGESAEFSFPLN EE+ GEL WKAEK Q WI+FS+KN++
Sbjct: 657 LSVLGFASTSITAYKSEGESAEFSFPLNLGEESLQGELRWKAEKAPSSQSWITFSLKNQK 836
Query: 263 VSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMKVAQL 322
VSVQKST + K QL ETLPLTL+IPQVSLQFAGSGNLTLTLD+G L+QEVNLVVMKV Q
Sbjct: 837 VSVQKSTSNPKFQLSETLPLTLQIPQVSLQFAGSGNLTLTLDRGILYQEVNLVVMKVTQP 1016
Query: 323 -NNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMD 381
+NTLTCEVMGPTSPKMRL LKQENQEARVS ++KV+QV APE G+WQCLLSEG++VKMD
Sbjct: 1017DSNTLTCEVMGPTSPKMRLILKQENQEARVSRQEKVIQVQAPEAGVWQCLLSEGEEVKMD 1196
Query: 382 SRIQVLSRGVNQTVFLACVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARMSQIKRLLSEK 441
S+IQVLS+G+NQT+FLA V VRCRHQQRQAARMSQIKRLLSEK
Sbjct: 1197SKIQVLSKGLNQTMFLAVVLGSAFSFLVFTGLCILFCVRCRHQQRQAARMSQIKRLLSEK 1376
Query: 442 KTCQCPHRMQKSHNLI 457
KTCQC HRMQKSHNLI
Sbjct: 1377KTCQCSHRMQKSHNLI 1424
>gb|M15768.1|RATCD4A Rat W3/25 antigen (homologue of human CD4) mRNA, complete cds
Length = 1749
Score = 576 bits (1484), Expect = e-162
Identities = 297/436 (68%), Positives = 337/436 (77%), Gaps = 1/436 (0%)
Frame = +3
Query: 23 VTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDR 82
VTQGKT+VLGKEG SAELPCES+ ++ F WK SDQ+ ILG K L+ GS + R
Sbjct: 123 VTQGKTVVLGKEGGSAELPCESTSRRSASFAWKSSDQKTILGYKNK--LLIKGSLELYSR 296
Query: 83 FDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXX 142
FDS+K AWE+GSFPLIINKL+MEDSQTY+CELEN+KEEVELWVF+VTF+P
Sbjct: 297 FDSRKNAWERGSFPLIINKLRMEDSQTYVCELENKKEEVELWVFRVTFNPGTRLLQGQSL 476
Query: 143 XXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMT 202
DSN KVS+P ECKH S +LR+QDS WNCTVTL+QKK+ F M
Sbjct: 477 TLILDSNPKVSDPPIECKHKSSNIVKDSKAFSTHSLRIQDSGIWNCTVTLNQKKHSFDMK 656
Query: 203 LSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKE 262
LSVLGF ST+ITAYKSEGESAEFSFPLN EE+ GEL WKAEK Q WI+FS+KN++
Sbjct: 657 LSVLGFASTSITAYKSEGESAEFSFPLNLGEESLQGELRWKAEKAPSSQSWITFSLKNQK 836
Query: 263 VSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMKVAQL 322
VSVQKST + K QL ETLPLTL+IPQVSLQFAGSGNLTLTLD+G L+QEVNLVVMKV Q
Sbjct: 837 VSVQKSTSNPKFQLSETLPLTLQIPQVSLQFAGSGNLTLTLDRGILYQEVNLVVMKVTQP 1016
Query: 323 -NNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMD 381
+NTLTCEVMGPTSPKMRL LKQENQEARVS ++KV+QV APE G+WQCLLSEG++VKMD
Sbjct: 1017DSNTLTCEVMGPTSPKMRLILKQENQEARVSRQEKVIQVQAPEAGVWQCLLSEGEEVKMD 1196
Query: 382 SRIQVLSRGVNQTVFLACVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARMSQIKRLLSEK 441
S+IQVLS+G+NQT+FLA V VRCRHQQRQAARMSQIKRLLSEK
Sbjct: 1197SKIQVLSKGLNQTMFLAVVLGSAFSFLVFTGLCILFCVRCRHQQRQAARMSQIKRLLSEK 1376
Query: 442 KTCQCPHRMQKSHNLI 457
KTCQC HRMQKSHNLI
Sbjct: 1377KTCQCSHRMQKSHNLI 1424
>gb|M92840.1|RABCD4 Oryctolagus cuniculus cell surface glycoprotein CD4 mRNA, complete
cds
Length = 1498
Score = 399 bits (1026), Expect = e-109
Identities = 213/442 (48%), Positives = 290/442 (65%), Gaps = 6/442 (1%)
Frame = +3
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKG---VLIRGGSPS 78
A T GKT+V GK G ELPC+SSQK+ +VF WK ++Q KILG G ++G SP
Sbjct: 126 AATWGKTVVRGKAGAIVELPCQSSQKRNSVFNWKHANQVKILGNQGSSSSSFWLKGNSPL 305
Query: 79 QFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXX 138
+R +SKK W++GSFPL+I L+M+DS TYICE+ ++K EVEL VF++T +P
Sbjct: 306 S-NRVESKKNMWDQGSFPLVIKDLRMDDSGTYICEVGDKKMEVELLVFRLTANPNTRLLH 482
Query: 139 XXXXXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTL-DQKKN 197
+ S V +P + K SM LR+QDS W+C ++ DQ K
Sbjct: 483 GQSLTLTLEGPS-VGSPSVQWKSPENKIIETGPTCSMPKLRLQDSGTWSCHLSFQDQNKL 659
Query: 198 WFGMTLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFS 257
+ + VLGF + T YK EGE EFSFPLNF +E+ GELMW+ + S Q W+SFS
Sbjct: 660 ELDIKIIVLGFPKASATVYKKEGEQVEFSFPLNFEDESLSGELMWQVDGASSAQSWVSFS 839
Query: 258 IKNKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVM 317
+++++VSVQK DLK+Q+ + LPL+L +PQ ++AGSGNL+LTLDKG LHQ+V+LV++
Sbjct: 840 LEDRKVSVQKILPDLKIQMSKGLPLSLTLPQALHRYAGSGNLSLTLDKGKLHQQVSLVML 1019
Query: 318 KVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDK 377
KV Q+ N LTCEV+GP PKM+L+LK E+QEA+VS QK+VQV+ P+ G WQCLLS GD+
Sbjct: 1020KVTQVKNKLTCEVLGPIDPKMKLSLKLEDQEAKVS-TQKMVQVLDPKAGTWQCLLSSGDQ 1196
Query: 378 VKMDSRIQVLSRGVN--QTVFLACVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARMSQIK 435
V ++S+ VL+ G++ Q LA V+CRH++ QA RMSQIK
Sbjct: 1197VLLESKADVLATGLSHQQPTLLAGALGGTAGLVLFAGLCIYCCVKCRHRRHQAQRMSQIK 1376
Query: 436 RLLSEKKTCQCPHRMQKSHNLI 457
+LLSEKKTCQCPHR+QK++NL+
Sbjct: 1377KLLSEKKTCQCPHRLQKTYNLL 1442
>ref|NM_000616.1| Homo sapiens CD4 antigen (p55) (CD4), mRNA
Length = 1742
Score = 387 bits (994), Expect = e-105
Identities = 215/437 (49%), Positives = 275/437 (62%), Gaps = 5/437 (1%)
Frame = +1
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFD 81
A TQGK +VLGK+G++ EL C +SQKK F WK S+Q KILG G + G D
Sbjct: 136 AATQGKKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGS--FLTKGPSKLND 309
Query: 82 RFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXX 141
R DS++ W++G+FPLII LK+EDS TYICE+E++KEEV+L VF +T +
Sbjct: 310 RADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQS 489
Query: 142 XXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGM 201
+S S+P +C+ LS+S L +QDS W CTV +QKK F +
Sbjct: 490 LTLTLESPPG-SSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKI 666
Query: 202 TLSVLGFQSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIK 259
+ VL FQ + YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +K
Sbjct: 667 DIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLK 846
Query: 260 NKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVM 317
NKEVSV++ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM
Sbjct: 847 NKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM 1026
Query: 318 KVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDK 377
+ QL LTCEV GPTSPK+ L+LK EN+EA+VS+ +K V V+ PE G+WQCLLS+ +
Sbjct: 1027RATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGMWQCLLSDSGQ 1206
Query: 378 VKMDSRIQVLSRGVNQTVFLA-CVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARMSQIKR 436
V ++S I+VL +A V VRCRH++RQA RMSQIKR
Sbjct: 1207VLLESNIKVLPTWSTPVQPMALIVLGGVAGLLLFIGLGIFFCVRCRHRRRQAERMSQIKR 1386
Query: 437 LLSEKKTCQCPHRMQKS 453
LLSEKKTCQCPHR QK+
Sbjct: 1387LLSEKKTCQCPHRFQKT 1437
>gb|M12807.1|HUMATCT4 Human T-cell surface glycoprotein T4 mRNA, complete cds
Length = 1742
Score = 387 bits (994), Expect = e-105
Identities = 215/437 (49%), Positives = 275/437 (62%), Gaps = 5/437 (1%)
Frame = +1
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFD 81
A TQGK +VLGK+G++ EL C +SQKK F WK S+Q KILG G + G D
Sbjct: 136 AATQGKKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGS--FLTKGPSKLND 309
Query: 82 RFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXX 141
R DS++ W++G+FPLII LK+EDS TYICE+E++KEEV+L VF +T +
Sbjct: 310 RADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQS 489
Query: 142 XXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGM 201
+S S+P +C+ LS+S L +QDS W CTV +QKK F +
Sbjct: 490 LTLTLESPPG-SSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKI 666
Query: 202 TLSVLGFQSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIK 259
+ VL FQ + YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +K
Sbjct: 667 DIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLK 846
Query: 260 NKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVM 317
NKEVSV++ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM
Sbjct: 847 NKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM 1026
Query: 318 KVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDK 377
+ QL LTCEV GPTSPK+ L+LK EN+EA+VS+ +K V V+ PE G+WQCLLS+ +
Sbjct: 1027RATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGMWQCLLSDSGQ 1206
Query: 378 VKMDSRIQVLSRGVNQTVFLA-CVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARMSQIKR 436
V ++S I+VL +A V VRCRH++RQA RMSQIKR
Sbjct: 1207VLLESNIKVLPTWSTPVQPMALIVLGGVAGLLLFIGLGIFFCVRCRHRRRQAERMSQIKR 1386
Query: 437 LLSEKKTCQCPHRMQKS 453
LLSEKKTCQCPHR QK+
Sbjct: 1387LLSEKKTCQCPHRFQKT 1437
>ref|XM_006966.2| Homo sapiens CD4 antigen (p55) (CD4), mRNA
Length = 1735
Score = 387 bits (994), Expect = e-105
Identities = 215/437 (49%), Positives = 275/437 (62%), Gaps = 5/437 (1%)
Frame = +2
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFD 81
A TQGK +VLGK+G++ EL C +SQKK F WK S+Q KILG G + G D
Sbjct: 128 AATQGKKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGS--FLTKGPSKLND 301
Query: 82 RFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXX 141
R DS++ W++G+FPLII LK+EDS TYICE+E++KEEV+L VF +T +
Sbjct: 302 RADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQS 481
Query: 142 XXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGM 201
+S S+P +C+ LS+S L +QDS W CTV +QKK F +
Sbjct: 482 LTLTLESPPG-SSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKI 658
Query: 202 TLSVLGFQSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIK 259
+ VL FQ + YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +K
Sbjct: 659 DIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLK 838
Query: 260 NKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVM 317
NKEVSV++ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM
Sbjct: 839 NKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM 1018
Query: 318 KVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDK 377
+ QL LTCEV GPTSPK+ L+LK EN+EA+VS+ +K V V+ PE G+WQCLLS+ +
Sbjct: 1019RATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGMWQCLLSDSGQ 1198
Query: 378 VKMDSRIQVLSRGVNQTVFLA-CVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARMSQIKR 436
V ++S I+VL +A V VRCRH++RQA RMSQIKR
Sbjct: 1199VLLESNIKVLPTWSTPVQPMALIVLGGVAGLLLFIGLGIFFCVRCRHRRRQAERMSQIKR 1378
Query: 437 LLSEKKTCQCPHRMQKS 453
LLSEKKTCQCPHR QK+
Sbjct: 1379LLSEKKTCQCPHRFQKT 1429
>gb|M35160.1|HUMATCT4A Human T4 surface glycoprotein CD4 gene, complete cds
Length = 1742
Score = 385 bits (989), Expect = e-105
Identities = 215/437 (49%), Positives = 274/437 (62%), Gaps = 5/437 (1%)
Frame = +1
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFD 81
A TQGK +VLGK+G++ EL C +SQKK F WK S+Q KILG G + G D
Sbjct: 136 AATQGKKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGS--FLTKGPSKLND 309
Query: 82 RFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXX 141
R DS++ W++G+FPLII LK+EDS TYICE+E++KEEV+L VF +T +
Sbjct: 310 RADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQS 489
Query: 142 XXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGM 201
+S S+P +C+ LS+S L +QDS W CTV +QKK F +
Sbjct: 490 LTLTLESPPG-SSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKI 666
Query: 202 TLSVLGFQSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIK 259
+ VL FQ + YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +K
Sbjct: 667 DIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLK 846
Query: 260 NKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVM 317
NKEVSV+ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM
Sbjct: 847 NKEVSVKWVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM 1026
Query: 318 KVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDK 377
+ QL LTCEV GPTSPK+ L+LK EN+EA+VS+ +K V V+ PE G+WQCLLS+ +
Sbjct: 1027RATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGMWQCLLSDSGQ 1206
Query: 378 VKMDSRIQVLSRGVNQTVFLA-CVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARMSQIKR 436
V ++S I+VL +A V VRCRH++RQA RMSQIKR
Sbjct: 1207VLLESNIKVLPTWSTPVQPMALIVLGGVAGLLLFIGLGIFFCVRCRHRRRQAERMSQIKR 1386
Query: 437 LLSEKKTCQCPHRMQKS 453
LLSEKKTCQCPHR QK+
Sbjct: 1387LLSEKKTCQCPHRFQKT 1437
>dbj|D86589.1|D86589 African green monkey mRNA for CD4, complete cds
Length = 1377
Score = 384 bits (985), Expect = e-104
Identities = 214/437 (48%), Positives = 272/437 (61%), Gaps = 5/437 (1%)
Frame = +1
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFD 81
AVTQGK +VLGK+G++ EL C +SQK T F WK S+Q KILG+ G + GS D
Sbjct: 61 AVTQGKKVVLGKKGDTVELTCNASQKTTTQFHWKNSNQIKILGKQGS--FLTKGSSKLRD 234
Query: 82 RFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXX 141
R DS+K W++G F +II LK+EDS+TYICE+EN++EEVEL VF +T +
Sbjct: 235 RIDSRKSLWDQGCFSMIIKNLKIEDSETYICEVENKEEEVELLVFGLTANSDTHLLQGQS 414
Query: 142 XXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGM 201
+S S+P +C+ LS+ L QDS W CTV+ DQ F +
Sbjct: 415 LTLTLESPPG-SSPSVKCRSPRGKNIQGGRTLSVPQLERQDSGTWTCTVSQDQNTVEFKI 591
Query: 202 TLSVLGFQSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIK 259
+ VL FQ + T YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +K
Sbjct: 592 DIMVLAFQKASSTVYKKEGEQVEFSFPLAFTLEKLTGSGELWWQAERASSSKSWITFDLK 771
Query: 260 NKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVM 317
NKEVSV++ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM
Sbjct: 772 NKEVSVKQVTQDPKLQMGKKLPLNLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM 951
Query: 318 KVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDK 377
+ Q LTCEV GPTSPK+ L+LK EN+ A VS++ K V V+ PE G+WQCLLS+ +
Sbjct: 952 RATQFQENLTCEVWGPTSPKLMLSLKLENKAATVSKQAKAVWVLNPEEGMWQCLLSDSGQ 1131
Query: 378 VKMDSRIQVLSRGVNQTVFLA-CVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARMSQIKR 436
V ++S I+VL +A V VRCRH++RQA RMSQIKR
Sbjct: 1132VLLESNIKVLPTWPTPVQPMALIVLGGVAGLLLFTGLGIFFCVRCRHRRRQAQRMSQIKR 1311
Query: 437 LLSEKKTCQCPHRMQKS 453
LLSEKKTCQCPHR QK+
Sbjct: 1312LLSEKKTCQCPHRFQKT 1362
>dbj|D63348.1|D63348 Macaca fuscata mRNA for precursor CD4, complete cds
Length = 1377
Score = 383 bits (983), Expect = e-104
Identities = 215/437 (49%), Positives = 272/437 (62%), Gaps = 5/437 (1%)
Frame = +1
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFD 81
AVTQGK +VLGK+G++ EL C +SQKK T F WK S+Q KILG G + G D
Sbjct: 61 AVTQGKKVVLGKKGDTVELTCNASQKKNTQFHWKNSNQIKILGIQGS--FLTKGPSKLSD 234
Query: 82 RFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXX 141
R DS+K W++G F +II LK+EDS TYICE+EN+KEEVEL VF +T +
Sbjct: 235 RADSRKSLWDQGCFSMIIKNLKIEDSDTYICEVENKKEEVELLVFGLTANSDTHLLEGQS 414
Query: 142 XXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGM 201
+S S+P +C+ +S+ L QDS W CTV+ DQK F +
Sbjct: 415 LTLTLESPPG-SSPSVKCRSPGGKNIQGGRTISVPQLERQDSGTWTCTVSQDQKTVEFKI 591
Query: 202 TLSVLGFQSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIK 259
+ VL FQ + T YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +K
Sbjct: 592 DIVVLAFQKASSTVYKKEGEQVEFSFPLAFTLEKLTGSGELWWQAERASSSKSWITFDLK 771
Query: 260 NKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVM 317
NKEVSV++ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM
Sbjct: 772 NKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM 951
Query: 318 KVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDK 377
+ AQ LTCEV GPTSPK+ L+LK EN+ A VS++ K V V+ PE G+WQCLLS+ +
Sbjct: 952 RAAQFQENLTCEVWGPTSPKLTLSLKLENKGATVSKQAKAVWVLNPEAGMWQCLLSDSGQ 1131
Query: 378 VKMDSRIQVLSRGVNQTVFLA-CVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARMSQIKR 436
V ++S I+V+ +A V VRCRH++RQA RMSQIKR
Sbjct: 1132VLLESNIKVVPTWPTPVQPMALIVLGGVAGLLLFTGLGIFFCVRCRHRRRQAERMSQIKR 1311
Query: 437 LLSEKKTCQCPHRMQKS 453
LLSEKKTCQCPHR QK+
Sbjct: 1312LLSEKKTCQCPHRFQKT 1362
>gb|M31135.1|CHPCD4A Chimpanzee lymphocyte antigen CD4 mRNA, complete cds
Length = 1553
Score = 382 bits (982), Expect = e-104
Identities = 213/437 (48%), Positives = 273/437 (61%), Gaps = 5/437 (1%)
Frame = +2
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFD 81
A TQGK +VLGK+G++ EL C +SQKK F WK S+Q KILG G + G D
Sbjct: 218 AATQGKKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQTKILGNQGS--FLTKGPSKLND 391
Query: 82 RFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXX 141
R DS++ W++G+F LII LK+EDS TYICE+ ++KEEV+L VF +T +
Sbjct: 392 RVDSRRSLWDQGNFTLIIKNLKIEDSDTYICEVGDQKEEVQLLVFGLTANSDTHLLQGQS 571
Query: 142 XXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGM 201
+S S+P +C+ LS+S L +QDS W CTV +QKK F +
Sbjct: 572 LTLTLESPPG-SSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKI 748
Query: 202 TLSVLGFQSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIK 259
+ VL FQ + YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +K
Sbjct: 749 DIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLK 928
Query: 260 NKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVM 317
NKEVSV++ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM
Sbjct: 929 NKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM 1108
Query: 318 KVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDK 377
+ QL LTCEV GPTSPK+ L+LK EN+EA+VS+ +K V V+ PE G+WQCLLS+ +
Sbjct: 1109RATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGMWQCLLSDSGQ 1288
Query: 378 VKMDSRIQVLSRGVNQTVFLA-CVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARMSQIKR 436
V ++S I+VL +A V VRCRH++RQA RMSQIKR
Sbjct: 1289VLLESNIKVLPTWSTPVQPMALIVLGGVAGLLLFIGLGIFFCVRCRHRRRQAQRMSQIKR 1468
Query: 437 LLSEKKTCQCPHRMQKS 453
LLSEKKTCQCPHR QK+
Sbjct: 1469LLSEKKTCQCPHRFQKT 1519
>gb|M31134.1|MACCD4A Rhesus monkey lymphocyte antigen CD4 mRNA, complete cds
Length = 1760
Score = 382 bits (980), Expect = e-104
Identities = 214/437 (48%), Positives = 273/437 (61%), Gaps = 5/437 (1%)
Frame = +2
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFD 81
AVTQGK +VLGK+G++ EL C +SQKK T F WK S+Q KILG +G+ + G D
Sbjct: 275 AVTQGKKVVLGKKGDTVELTCTASQKKNTQFHWKNSNQIKILGI--QGLFLTKGPSKLSD 448
Query: 82 RFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXX 141
R DS+K W++G F +II LK+EDS TYICE+EN+KEEVEL VF +T +
Sbjct: 449 RADSRKSLWDQGCFSMIIKNLKIEDSDTYICEVENKKEEVELLVFGLTANSDTHLLEGQS 628
Query: 142 XXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGM 201
+S S+P +C+ +S+ L QDS W CTV+ DQK F +
Sbjct: 629 LTLTLESPPG-SSPSVKCRSPGGKNIQGGRTISVPQLERQDSGTWTCTVSQDQKTVEFKI 805
Query: 202 TLSVLGFQSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIK 259
+ VL FQ + T YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +K
Sbjct: 806 DIVVLAFQKASSTVYKKEGEQVEFSFPLAFTLEKLTGSGELWWQAERASSSKSWITFDLK 985
Query: 260 NKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVM 317
NKEVSV++ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM
Sbjct: 986 NKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM 1165
Query: 318 KVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDK 377
+ Q LTCEV GPTSPK+ L+LK EN+ A VS++ K V V+ PE G+WQCLLS+ +
Sbjct: 1166RATQFQENLTCEVWGPTSPKLTLSLKLENKGATVSKQAKAVWVLNPEAGMWQCLLSDSGQ 1345
Query: 378 VKMDSRIQVLSRGVNQTVFLA-CVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARMSQIKR 436
V ++S I+V+ +A V VRCRH++RQA RMSQIKR
Sbjct: 1346VLLESNIKVVPTWPTPVQPMALIVLGGVAGLLLFTGLGIFFCVRCRHRRRQAERMSQIKR 1525
Query: 437 LLSEKKTCQCPHRMQKS 453
LLSEKKTCQCPHR QK+
Sbjct: 1526LLSEKKTCQCPHRFQKT 1576
>dbj|D63346.1|D63346 Macaca nemestrina mRNA for precursor CD4, complete cds
Length = 1377
Score = 380 bits (976), Expect = e-103
Identities = 215/437 (49%), Positives = 268/437 (61%), Gaps = 5/437 (1%)
Frame = +1
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFD 81
AVTQGK +VLGK+G++ EL C +SQKK T F WK SDQ KILG G + G D
Sbjct: 61 AVTQGKKVVLGKKGDTVELTCNASQKKNTQFHWKNSDQIKILGIQGS--FLTKGPSKLSD 234
Query: 82 RFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXX 141
R DS+K W++G F +II LK+EDS TYICE+EN KEEVEL VF +T +
Sbjct: 235 RADSRKSLWDQGCFSMIIKNLKIEDSNTYICEVENEKEEVELLVFGLTANSDTHLLEGQS 414
Query: 142 XXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGM 201
+S S+P +C+ LS+ L QDS W CTV+ DQK F +
Sbjct: 415 LTLTLESPPG-SSPSVKCRSPGGKNIQGGRTLSVPQLERQDSGTWTCTVSQDQKTVEFKI 591
Query: 202 TLSVLGFQSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIK 259
+ VL FQ + T YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +K
Sbjct: 592 DIVVLAFQKASSTVYKKEGEQVEFSFPLAFTLEKLTGSGELWWQAERASSSKSWITFDLK 771
Query: 260 NKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVM 317
NKEVSV++ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL LD G LHQEVNLVVM
Sbjct: 772 NKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALDAKTGKLHQEVNLVVM 951
Query: 318 KVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDK 377
+ Q LTCEV GPTSPK+ L+LK EN+ VS++ K V V+ PE G+WQCLLS+ +
Sbjct: 952 RATQFQENLTCEVWGPTSPKLTLSLKLENKGTTVSKQAKAVWVLNPEAGMWQCLLSDSGQ 1131
Query: 378 VKMDSRIQVLSRGVNQTVFLA-CVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARMSQIKR 436
V ++S I+V+ +A V VRCRH++RQA RMSQIKR
Sbjct: 1132VLLESNIKVVPTWPTPVQPMALIVLGGVAGLLLFTGLGIFFCVRCRHRRRQAERMSQIKR 1311
Query: 437 LLSEKKTCQCPHRMQKS 453
LLSEKKTCQCPH QK+
Sbjct: 1312LLSEKKTCQCPHWFQKT 1362
>dbj|D63347.1|MACCD4 Rhesus monkey mRNA for CD4, complete cds
Length = 1377
Score = 380 bits (975), Expect = e-103
Identities = 214/437 (48%), Positives = 270/437 (60%), Gaps = 5/437 (1%)
Frame = +1
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFD 81
AVTQGK +VLGK+G++ EL C +SQKK T F WK S+Q KILG G + G D
Sbjct: 61 AVTQGKKVVLGKKGDTVELTCNASQKKNTQFHWKNSNQIKILGIQGS--FLTKGPSKLSD 234
Query: 82 RFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXX 141
R DS+K W++G F +II LK+EDS TYICE+EN+KEEVEL VF +T +
Sbjct: 235 RADSRKSLWDQGCFSMIIKNLKIEDSDTYICEVENKKEEVELLVFGLTANSDTHLLEGQS 414
Query: 142 XXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGM 201
+S S+P +C+ LS+ L QDS W CTV+ DQK F +
Sbjct: 415 LTLTLESPPG-SSPSVKCRSPGGKNIQGGRTLSVPQLERQDSGTWTCTVSQDQKTVEFKI 591
Query: 202 TLSVLGFQSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIK 259
+ VL FQ + T YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +K
Sbjct: 592 DIVVLAFQKASSTVYKKEGEQVEFSFPLAFTLEKLTGSGELWWQAERASSPKSWITFDLK 771
Query: 260 NKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVM 317
NKEVSV++ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM
Sbjct: 772 NKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM 951
Query: 318 KVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDK 377
+ Q LTCEV GPTSPK+ L+LK EN+ VS++ K V V+ PE G+WQCLLS+ +
Sbjct: 952 RATQFQENLTCEVWGPTSPKLTLSLKLENKGTTVSKQAKAVWVLNPEAGMWQCLLSDSGQ 1131
Query: 378 VKMDSRIQVLSRGVNQTVFLA-CVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARMSQIKR 436
V ++S I+V+ +A V VRCRH++RQA RMSQIKR
Sbjct: 1132VLLESNIKVVPTWPTPVQPMALIVLGGVAGLLLFTGLGIFFCVRCRHRRRQAERMSQIKR 1311
Query: 437 LLSEKKTCQCPHRMQKS 453
LLSEKKTCQCPHR QK+
Sbjct: 1312LLSEKKTCQCPHRFQKT 1362
>dbj|D86588.1|D86588 Squirrel monkey mRNA for CD4, complete cds
Length = 1374
Score = 378 bits (971), Expect = e-103
Identities = 213/437 (48%), Positives = 270/437 (61%), Gaps = 5/437 (1%)
Frame = +1
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFD 81
AVT GKT+VLGK+GE ELPCE+S KK F WK SDQ KILG + + G D
Sbjct: 61 AVTHGKTVVLGKKGEVVELPCETSLKKNVPFHWKTSDQIKILGV--QNYFVTRGQSKLTD 234
Query: 82 RFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXX 141
R DSKK +W++GSFPL+I ++EDS+TYICE+E++KEEVEL VF +T +P
Sbjct: 235 RIDSKKSSWDRGSFPLLIKDARIEDSETYICEVESKKEEVELQVFGLTANPDTHLLQGQS 414
Query: 142 XXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGM 201
+S S+P EC LS+S L + DS W CTV + F +
Sbjct: 415 LTLTLESPPG-SSPSVECTSPRGKRIRGRKTLSVSQLGIPDSGTWKCTV-FQHLELVFEI 588
Query: 202 TLSVLGFQSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIK 259
+ VL FQ + T YK EGE EFSFPL FA E G GEL W+AE+ S + WI+F++
Sbjct: 589 NIVVLAFQQASSTVYKKEGEQVEFSFPLAFAAETLTGSGELCWQAERASSSKSWITFNLT 768
Query: 260 NKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLD--KGTLHQEVNLVVM 317
+EV V+ T+D KL++ + LPL L + Q Q+AGSGN TL L G LHQEVNLVVM
Sbjct: 769 KQEVYVKLVTQDPKLRMGKKLPLHLTLAQALPQYAGSGNFTLALKGKTGKLHQEVNLVVM 948
Query: 318 KVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDK 377
+V QL N LTCEV GPTSPK+ L+LK ENQEA+VS+ +K V V+ PE G WQCLLS+ +
Sbjct: 949 RVTQLQNNLTCEVWGPTSPKLMLSLKLENQEAKVSKREKAVWVLNPEPGAWQCLLSDSGQ 1128
Query: 378 VKMDSRIQVL-SRGVNQTVFLACVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARMSQIKR 436
V ++S+ + L +R + V VRCRH++RQA RMSQIKR
Sbjct: 1129VLLESKFEALPTRSPPVQPMVLIVLGGVAGLLAFTGLGIFLCVRCRHRRRQAERMSQIKR 1308
Query: 437 LLSEKKTCQCPHRMQKS 453
LLSEKKTCQCPHR QK+
Sbjct: 1309LLSEKKTCQCPHRFQKT 1359
>dbj|D63349.1|D63349 Macaca fascicularis mRNA for CD4 precursor, complete cds
Length = 1377
Score = 378 bits (970), Expect = e-103
Identities = 213/437 (48%), Positives = 269/437 (60%), Gaps = 5/437 (1%)
Frame = +1
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFD 81
AVTQGK +VLGK+G++ EL C +SQKK T F WK S+Q KILG G + G D
Sbjct: 61 AVTQGKKVVLGKKGDTVELTCNASQKKNTQFHWKNSNQIKILGIQGS--FLTKGPSKLSD 234
Query: 82 RFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXX 141
R DS+K W++G F +II LK+EDS TYICE+EN+KEEVEL VF +T +
Sbjct: 235 RADSRKSLWDQGCFSMIIKNLKIEDSDTYICEVENKKEEVELLVFGLTANSDTHLLEGQS 414
Query: 142 XXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGM 201
+S S+P +C+ LS+ L QDS W CTV+ DQK F +
Sbjct: 415 LTLTLESPPG-SSPSVKCRSPGGKNIQGGRTLSVPQLERQDSGTWTCTVSQDQKTVEFKI 591
Query: 202 TLSVLGFQSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIK 259
+ VL FQ + T YK EGE EFSFP F E G GEL W+AE+ S + WI+F +K
Sbjct: 592 DIVVLAFQKASSTVYKKEGEQVEFSFPPAFTLEKLTGSGELWWQAERASSSKSWITFDLK 771
Query: 260 NKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVM 317
NKEVSV++ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM
Sbjct: 772 NKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM 951
Query: 318 KVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDK 377
+ Q LTCEV GPTSPK+ L+LK EN+ VS++ K V V+ PE G+WQCLLS+ +
Sbjct: 952 RATQFQENLTCEVWGPTSPKLTLSLKLENKGTTVSKQAKAVWVLNPEAGMWQCLLSDSGQ 1131
Query: 378 VKMDSRIQVLSRGVNQTVFLA-CVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARMSQIKR 436
V ++S I+V+ +A V VRCRH++RQA RMSQIKR
Sbjct: 1132VLLESNIKVVPTWPTPVQPMALIVLGGVAGLLLFTGLGIFFCVRCRHRRRQAERMSQIKR 1311
Query: 437 LLSEKKTCQCPHRMQKS 453
LLSEKKTCQCPHR QK+
Sbjct: 1312LLSEKKTCQCPHRFQKT 1362
>gb|AF071799.1|AF071799 Delphinapterus leucas T-cell surface glycoprotein CD4 precursor,
mRNA, complete cds
Length = 2662
Score = 363 bits (933), Expect = 1e-98
Identities = 201/437 (45%), Positives = 273/437 (61%), Gaps = 2/437 (0%)
Frame = +1
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFD 81
A TQGK +VLGK GE AELPC++SQ K F+WK S Q KILG+HG G+ +
Sbjct: 157 AGTQGKKVVLGKAGELAELPCKASQNKSLFFSWKNSYQTKILGRHG--YFWHKGASNLHS 330
Query: 82 RFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXX 141
R +SK W++GSFPL+I L++ DS TYICE+E++K EVEL VF++T S
Sbjct: 331 RVESKINLWDQGSFPLVIKDLEVPDSGTYICEVEDKKIEVELQVFRLTASSDTRLLLGQS 510
Query: 142 XXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGM 201
+ S SNP + K LS+ + +QDS W CTV+ Q+ F
Sbjct: 511 LTLTLEGPSG-SNPSVQWKGPGNKRKNEAKSLSLPQVGLQDSGTWTCTVSQAQQTLVFNK 687
Query: 202 TLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMW-KAEKDSFFQPWISFSIKN 260
+ VL FQ + T Y EGE FSFPL F +EN GEL W +A+ +S + WI+F + N
Sbjct: 688 HILVLAFQEVSSTVYAKEGEQMNFSFPLTFGDENLSGELSWLQAKGNSSPESWITFKLNN 867
Query: 261 KEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMKVA 320
+V+V K+ KDLKL++ + LPL L +PQ Q+AGSGNLTL L KG L+QEVNLVVM+V
Sbjct: 868 GKVTVGKARKDLKLRMSKALPLHLTLPQALPQYAGSGNLTLNLTKGKLYQEVNLVVMRVT 1047
Query: 321 QLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKM 380
+ N+LTCEV+GPTSP++ L+LK+ENQ RVS++QK+V V+ PE G+WQCLLS+ KV +
Sbjct: 1048KSPNSLTCEVLGPTSPRLILSLKKENQSMRVSDQQKLVTVLGPEAGMWQCLLSDKGKVLL 1227
Query: 381 DSRIQVLSRGV-NQTVFLACVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARMSQIKRLLS 439
+S++++L + + L V +C H++R+A R SQIKRLLS
Sbjct: 1228ESKVKILPPVLAHAWPKLLAVVLGGITSLLLLAGFCIFSAKCWHRRRRAERTSQIKRLLS 1407
Query: 440 EKKTCQCPHRMQKSHNL 456
EKKTC C HR+QK+ +L
Sbjct: 1408EKKTCHCSHRLQKTCSL 1458
>dbj|AB000483.1|AB000483 Felis catus mRNA for CD4 antigen, complete cds
Length = 3074
Score = 360 bits (925), Expect = 1e-97
Identities = 206/454 (45%), Positives = 265/454 (57%), Gaps = 18/454 (3%)
Frame = +2
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFD 81
AV QGK +VLGK G +AELPC++SQKK FTW+ S Q KIL + + G S +
Sbjct: 194 AVPQGKEVVLGKAGGTAELPCQASQKKYMTFTWRLSSQVKILESQHSSLCLTGSSKLK-T 370
Query: 82 RFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXX 141
RF+SKK W++GSFPL+I L++ DS Y CE+EN+K EVEL VF +T
Sbjct: 371 RFESKKILWDQGSFPLVIKSLQVADSGIYTCEVENKKREVELLVFGLTAKVDPSGSGGSS 550
Query: 142 XXXXXDSNS----------------KVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDF 185
S S SNP + K LS+S L +Q+S
Sbjct: 551 SSSTSTSTSIYLLQGQSLTLTLESPSSSNPSVQWKGPGNKSKSGVHSLSLSQLELQESGT 730
Query: 186 WNCTVTLDQKKNWFGMTLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAE 245
CTV+ QK F + VL F+ + T Y EGE EFSFPLNF +EN G L WKAE
Sbjct: 731 CTCTVSQSQKTLVFNTNILVLAFRKVSNTVYAKEGEQVEFSFPLNFEDENLMGNLRWKAE 910
Query: 246 KDSFFQPWISFSIKNKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK 305
WISF++KNK++SV++ KLQ+ ++LPL +P V ++AGSGNLTL LDK
Sbjct: 911 GAPSSLLWISFTLKNKQLSVKEVDPYSKLQMMDSLPLRFTLPNVLSRYAGSGNLTLVLDK 1090
Query: 306 GTLHQEVNLVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPET 365
G L QEV LVVM+V Q N LTCEV+GPTSP++ L+LK + Q A+VS++QK+V+V E
Sbjct: 1091GQLQQEVKLVVMRVTQSGNNLTCEVLGPTSPELTLSLKLKGQAAKVSKQQKMVRVEDAEA 1270
Query: 366 GLWQCLLSEGDKVKMDSRIQVLSRGVNQ--TVFLACVXXXXXXXXXXXXXXXXXXVRCRH 423
G WQCLLS DKV + S+ +VL + + T L V V+C H
Sbjct: 1271GTWQCLLSHKDKVLLASKAEVLPPVLTRTWTNLLTIVLGGVLGLVLYIGLWVYCCVKCWH 1450
Query: 424 QQRQAARMSQIKRLLSEKKTCQCPHRMQKSHNLI 457
++RQAARMS IKRLLSEKKTCQC HR+QK+ N I
Sbjct: 1451RRRQAARMSHIKRLLSEKKTCQCSHRLQKTCNPI 1552
>gb|L06130.1|DOGCD4 Canis familiaris CD4 antigen mRNA, complete cds
Length = 1655
Score = 332 bits (851), Expect = 4e-89
Identities = 193/446 (43%), Positives = 263/446 (58%), Gaps = 10/446 (2%)
Frame = +3
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFD 81
AVT + +VLGK G++ ELPC++SQKK F W+ S +ILG G + GS
Sbjct: 219 AVTPVREVVLGKAGDAVELPCQTSQKKNIHFNWRDSSMVQILGNQGSFWTV--GSSRLKH 392
Query: 82 RFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXX 141
R +SKK W++GSFPL+I L++ DS Y C+ + R +EVEL VF +T
Sbjct: 393 RVESKKNLWDQGSFPLVIKDLEVADSGIYFCDTDKR-QEVELLVFNLTAKWDSGSSSGSS 569
Query: 142 XXXXXDS--------NSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLD 193
N S+P + K LS+S +QD W C ++
Sbjct: 570 NIRLLQGQQLTLTLENPSGSSPSVQWKGPGNKSKHGGQNLSLSWPELQDGGTWTCIISQS 749
Query: 194 QKKNWFGMTLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPW 253
QK F + + VL FQ + T Y EG+ EFSFPL+F +EN GEL W+A+ S W
Sbjct: 750 QKTVEFNINVLVLAFQKVSNTFYAREGDQVEFSFPLSFEDENLVGELRWQAQGASSSLLW 929
Query: 254 ISFSIKNKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVN 313
ISF+++N+++S++++ LKLQ+KE+LPL +PQV ++AGSG LTL L KGTL+QEVN
Sbjct: 930 ISFTLENRKLSMKEAHAPLKLQMKESLPLRFTLPQVLSRYAGSGILTLNLAKGTLYQEVN 1109
Query: 314 LVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLS 373
LVVM+ N LTCEV+GPTSP++ L+L + Q A+VS++QK+V VV PE G WQCLLS
Sbjct: 1110LVVMRANSSQNNLTCEVLGPTSPELTLSLNLKEQAAKVSKQQKLVWVVDPEGGTWQCLLS 1289
Query: 374 EGDKVKMDSRIQVLSRGVNQT--VFLACVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARM 431
+ DKV + S + V S V ++ FLA V+C ++RQA RM
Sbjct: 1290DKDKVLLASSLNVSSPVVIKSWPKFLAITLGGILGLLLLIGLCVFCCVKCWRRRRQAERM 1469
Query: 432 SQIKRLLSEKKTCQCPHRMQKSHNLI 457
SQIKRLLSEKKTCQC HR+QK+ +LI
Sbjct: 1470SQIKRLLSEKKTCQCSHRIQKTCSLI 1547
>gb|AF001225.1|AF001225 Cercopithecus sabaeus CD4 (CD4) mRNA, partial cds
Length = 1192
Score = 322 bits (824), Expect = 6e-86
Identities = 176/363 (48%), Positives = 229/363 (62%), Gaps = 4/363 (1%)
Frame = +1
Query: 29 LVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKG 88
+VLGK+G++ EL C +SQ T F WK S+Q KILG+ G + GS DR DS+K
Sbjct: 1 VVLGKKGDTVELTCNASQNTTTQFHWKNSNQIKILGKQGS--FLTKGSSKLRDRIDSRKS 174
Query: 89 AWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXXXXXXDS 148
W++G F +II LK+EDS+TYICE+EN+KEEVEL VF +T + +S
Sbjct: 175 LWDQGCFSMIIKNLKIEDSETYICEVENKKEEVELLVFGLTANSDTHLLQGQSLTLTLES 354
Query: 149 NSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLSVLGF 208
S+P +C+ LS+ L QDS W CTV+ DQ F + + VL F
Sbjct: 355 PPG-SSPSVKCRSPRGKNIQGGRTLSVPQLERQDSGTWTCTVSQDQNMVEFKIDIVVLAF 531
Query: 209 QSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
Q + T YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +KNKEVSV+
Sbjct: 532 QKASSTVYKKEGEQVEFSFPLAFTLEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVK 711
Query: 267 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVMKVAQLNN 324
+ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM+ Q
Sbjct: 712 QVTQDPKLQMGKKLPLNLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQFQE 891
Query: 325 TLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRI 384
LTCEV GPTSPK+ L+LK EN+ A VS++ K V V+ PE G+WQCLLS+ +V ++S I
Sbjct: 892 NLTCEVWGPTSPKLMLSLKLENKAATVSKQAKAVWVLNPEAGMWQCLLSDSGQVLLESNI 1071
Query: 385 QVL 387
+VL
Sbjct: 1072KVL 1080
>emb|X73327.1|CACD41 C.atys CD4 mRNA 1
Length = 1192
Score = 322 bits (824), Expect = 6e-86
Identities = 176/363 (48%), Positives = 230/363 (62%), Gaps = 4/363 (1%)
Frame = +1
Query: 29 LVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKG 88
+VLGK+G++ EL C +SQKK T F WK S Q KILG G + GS DR DS+K
Sbjct: 1 VVLGKKGDTVELACNASQKKSTQFHWKNSKQIKILGNQGS--FLTKGSSKLSDRADSRKS 174
Query: 89 AWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXXXXXXDS 148
W++G F +II LK+EDS+TYICE+EN+KEEVEL VF +T + +S
Sbjct: 175 LWDQGCFSMIIKNLKIEDSETYICEVENKKEEVELLVFGLTANSDTHLLEGQSLTLTLES 354
Query: 149 NSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLSVLGF 208
S+P +C+ LS+ L QDS W CTV+ DQK F + + VL F
Sbjct: 355 PPG-SSPSVKCRSPRGKNIQGGRTLSVPQLERQDSGTWTCTVSQDQKTVEFKIDIVVLAF 531
Query: 209 QSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
Q + T YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +KNKEVSV+
Sbjct: 532 QKASSTVYKKEGEQVEFSFPLAFTLEELTGSGELWWQAERASSSKSWITFDLKNKEVSVK 711
Query: 267 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGT--LHQEVNLVVMKVAQLNN 324
+ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ T LHQEVNLVVM+ Q
Sbjct: 712 RVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTEKLHQEVNLVVMRATQFQE 891
Query: 325 TLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRI 384
LTCEV GPTSPK+ L+L+ EN++A VS++ K V V+ PE G+WQCLLS+ + ++S I
Sbjct: 892 NLTCEVWGPTSPKLTLSLRLENKKATVSKQAKAVWVLNPEAGMWQCLLSDSGQALLESNI 1071
Query: 385 QVL 387
+V+
Sbjct: 1072KVV 1080
>gb|AF001228.1| Cercopithecus aethiops (Barbados) CD4 (CD4) mRNA, partial cds
Length = 1192
Score = 321 bits (823), Expect = 8e-86
Identities = 176/363 (48%), Positives = 229/363 (62%), Gaps = 4/363 (1%)
Frame = +1
Query: 29 LVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKG 88
+VLGK+G++ EL C +SQ T F WK S+Q KILG+ G + GS DR DS+K
Sbjct: 1 VVLGKKGDTVELTCNASQNTTTQFHWKNSNQIKILGKQGS--FLTKGSSKLRDRIDSRKS 174
Query: 89 AWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXXXXXXDS 148
W++G F +II LK+EDS+TYICE+EN+KEEVEL VF +T + +S
Sbjct: 175 LWDQGCFSMIIKNLKIEDSETYICEVENKKEEVELLVFGLTANSDTHLLQGQSLTLTLES 354
Query: 149 NSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLSVLGF 208
S+P +C+ LS+ L QDS W CTV+ DQ F + + VL F
Sbjct: 355 PPG-SSPSVKCRSPRGKNIQGGRTLSVPQLERQDSGTWTCTVSQDQNTVEFKIDIVVLAF 531
Query: 209 QSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
Q + T YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +KNKEVSV+
Sbjct: 532 QKASSTVYKKEGEQVEFSFPLAFTLEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVK 711
Query: 267 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVMKVAQLNN 324
+ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM+ Q
Sbjct: 712 QVTQDPKLQMGKKLPLNLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQFQE 891
Query: 325 TLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRI 384
LTCEV GPTSPK+ L+LK EN+ A VS++ K V V+ PE G+WQCLLS+ +V ++S I
Sbjct: 892 NLTCEVWGPTSPKLMLSLKLENKAATVSKQAKAVWVLNPEEGMWQCLLSDSGQVLLESNI 1071
Query: 385 QVL 387
+VL
Sbjct: 1072KVL 1080
>gb|AF001227.1|AF001227 Cercopithecus pygerythrus CD4 (CD4) mRNA, partial cds
Length = 1192
Score = 321 bits (823), Expect = 8e-86
Identities = 176/363 (48%), Positives = 229/363 (62%), Gaps = 4/363 (1%)
Frame = +1
Query: 29 LVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKG 88
+VLGK+G++ EL C +SQ T F WK S+Q KILG+ G + GS DR DS+K
Sbjct: 1 VVLGKKGDTVELTCNASQNTTTQFHWKNSNQIKILGKQGS--FLTKGSSKLRDRIDSRKS 174
Query: 89 AWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXXXXXXDS 148
W++G F +II LK+EDS+TYICE+EN+KEEVEL VF +T + +S
Sbjct: 175 LWDQGCFSMIIKNLKIEDSETYICEVENKKEEVELLVFGLTANSDTHLLQGQSLTLTLES 354
Query: 149 NSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLSVLGF 208
S+P +C+ LS+ L QDS W CTV+ DQ F + + VL F
Sbjct: 355 PPG-SSPSVKCRSPRGKNIQGGRTLSVPQLERQDSGTWTCTVSQDQNTVEFKIDIVVLAF 531
Query: 209 QSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
Q + T YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +KNKEVSV+
Sbjct: 532 QKASSTVYKKEGEQVEFSFPLAFTLEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVK 711
Query: 267 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVMKVAQLNN 324
+ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM+ Q
Sbjct: 712 QVTQDPKLQMGKKLPLNLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQFQE 891
Query: 325 TLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRI 384
LTCEV GPTSPK+ L+LK EN+ A VS++ K V V+ PE G+WQCLLS+ +V ++S I
Sbjct: 892 NLTCEVWGPTSPKLMLSLKLENKAATVSKQAKAVWVLNPEEGMWQCLLSDSGQVLLESNI 1071
Query: 385 QVL 387
+VL
Sbjct: 1072KVL 1080
>emb|X73322.1|CACD4 C.aethiops CD4 mRNA
Length = 1192
Score = 321 bits (823), Expect = 8e-86
Identities = 176/363 (48%), Positives = 229/363 (62%), Gaps = 4/363 (1%)
Frame = +1
Query: 29 LVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKG 88
+VLGK+G++ EL C +SQ T F WK S+Q KILG+ G + GS DR DS+K
Sbjct: 1 VVLGKKGDTVELTCNASQNTTTQFHWKNSNQIKILGKQGS--FLTKGSSKLRDRIDSRKS 174
Query: 89 AWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXXXXXXDS 148
W++G F +II LK+EDS+TYICE+EN+KEEVEL VF +T + +S
Sbjct: 175 LWDQGCFSMIIKNLKIEDSETYICEVENKKEEVELLVFGLTANSDTHLLQGQSLTLTLES 354
Query: 149 NSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLSVLGF 208
S+P +C+ LS+ L QDS W CTV+ DQ F + + VL F
Sbjct: 355 PPG-SSPSVKCRSPRGKNIQGGRTLSVPQLERQDSGTWTCTVSQDQNTVEFKIDIVVLAF 531
Query: 209 QSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
Q + T YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +KNKEVSV+
Sbjct: 532 QKASSTVYKKEGEQVEFSFPLAFTLEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVK 711
Query: 267 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVMKVAQLNN 324
+ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM+ Q
Sbjct: 712 QVTQDPKLQMGKKLPLNLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQFQE 891
Query: 325 TLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRI 384
LTCEV GPTSPK+ L+LK EN+ A VS++ K V V+ PE G+WQCLLS+ +V ++S I
Sbjct: 892 NLTCEVWGPTSPKLMLSLKLENKAATVSKQAKAVWVLNPEEGMWQCLLSDSGQVLLESNI 1071
Query: 385 QVL 387
+VL
Sbjct: 1072KVL 1080
>emb|X73323.1|PTCD4 P.troglodytes CD4 mRNA
Length = 1192
Score = 321 bits (822), Expect = 1e-85
Identities = 175/363 (48%), Positives = 232/363 (63%), Gaps = 4/363 (1%)
Frame = +1
Query: 29 LVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKG 88
+VLGK+G++ EL C +SQKK F WK S+Q KILG G + G DR DS++
Sbjct: 1 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQTKILGNQGS--FLTKGPSKLNDRVDSRRS 174
Query: 89 AWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXXXXXXDS 148
W++G+F LII LK+EDS TYICE+ ++KEEV+L VF +T + +S
Sbjct: 175 LWDQGNFTLIIKNLKIEDSDTYICEVGDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLES 354
Query: 149 NSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLSVLGF 208
S+P +C+ LS+S L +QDS W CTV +QKK F + + VL F
Sbjct: 355 PPG-SSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAF 531
Query: 209 QSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
Q + YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +KNKEVSV+
Sbjct: 532 QKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVK 711
Query: 267 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVMKVAQLNN 324
+ T+D KLQ+ + LPL L +PQ Q+AGSG+LTL L+ G LHQEVNLVVM+ QL
Sbjct: 712 RVTQDPKLQMGKKLPLHLTLPQALPQYAGSGDLTLALEAKTGKLHQEVNLVVMRATQLQK 891
Query: 325 TLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRI 384
LTCEV GPTSPK+ L+LK EN+EA+VS+ +K V V+ PE G+WQCLLS+ +V ++S I
Sbjct: 892 NLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGMWQCLLSDSGQVLLESNI 1071
Query: 385 QVL 387
+VL
Sbjct: 1072KVL 1080
>emb|X73324.1|EPCD4 E.patas CD4 mRNA
Length = 1192
Score = 321 bits (822), Expect = 1e-85
Identities = 177/363 (48%), Positives = 232/363 (63%), Gaps = 4/363 (1%)
Frame = +1
Query: 29 LVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKG 88
+VLGK+G++ EL C +SQK T F WK S+Q KILG+ G L +G S + DR DS+K
Sbjct: 1 VVLGKKGDTVELTCNASQKTTTQFHWKNSNQMKILGKQGS-FLTKGPSKLR-DRTDSRKS 174
Query: 89 AWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXXXXXXDS 148
W++G F +II LK+EDS+TYICE+E++KEEVEL VF +T + +S
Sbjct: 175 LWDQGCFSMIIKNLKIEDSETYICEVEDKKEEVELLVFGLTANSDTHLLQGQSLTLTLES 354
Query: 149 NSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLSVLGF 208
S+P +C+ LS+ L QDS W CTV+ DQ F + + VL F
Sbjct: 355 PPG-SSPSVKCRSPRGKNIQGGRTLSVPQLERQDSGTWTCTVSQDQNTVEFKIDIVVLAF 531
Query: 209 QSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
Q + T YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +KNKEVSV+
Sbjct: 532 QKASSTVYKKEGEQVEFSFPLAFTLEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVK 711
Query: 267 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVMKVAQLNN 324
+ T+D KLQ+ E LPL L +PQ +AGSGNLTL L+ G LHQEVNLVVM+ Q
Sbjct: 712 RVTQDPKLQMGEKLPLHLTLPQALPHYAGSGNLTLALEAKTGKLHQEVNLVVMRATQFQE 891
Query: 325 TLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRI 384
LTCEV GPTSPK+ L+LK EN+EA +S++ K V V+ PE G+WQCLLS+ +V ++S I
Sbjct: 892 NLTCEVWGPTSPKLTLSLKLENKEATISKQAKAVWVLNPEEGMWQCLLSDSGQVLLESNI 1071
Query: 385 QVL 387
+VL
Sbjct: 1072KVL 1080
>gb|AF001223.1|AF001223 Cercopithecus sabaeus CD4 (CD4) mRNA, partial cds
Length = 1192
Score = 320 bits (821), Expect = 1e-85
Identities = 175/363 (48%), Positives = 230/363 (63%), Gaps = 4/363 (1%)
Frame = +1
Query: 29 LVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKG 88
+VLGK+G++ EL C +SQK T F WK S+Q KILG+ G + GS DR DS+K
Sbjct: 1 VVLGKKGDTVELTCNASQKTTTQFHWKNSNQIKILGKQGS--FLTKGSSKLRDRIDSRKS 174
Query: 89 AWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXXXXXXDS 148
W++G F +II LK+EDS+TYICE+EN++EEVEL VF +T + +S
Sbjct: 175 LWDQGCFSMIIKNLKIEDSETYICEVENKEEEVELLVFGLTANSDTHLLQGQSLTLTLES 354
Query: 149 NSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLSVLGF 208
S+P +C+ LS+ L QDS W C V+ DQ F + + VL F
Sbjct: 355 PPG-SSPSVKCRSPRGKNIQGGRTLSVPQLERQDSGTWTCNVSQDQNTVEFKIDIVVLAF 531
Query: 209 QSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
Q + T YK EGE EFSFPL F E G GEL W+AE+ S + WI+F++KNKEVSV+
Sbjct: 532 QKASSTVYKKEGEQVEFSFPLAFTLEKLTGSGELWWQAERASSSKSWITFNLKNKEVSVK 711
Query: 267 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVMKVAQLNN 324
+ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM+ Q
Sbjct: 712 QVTQDPKLQMGKKLPLNLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQFQE 891
Query: 325 TLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRI 384
LTCEV GPTSPK+ L+LK EN+ A VS++ K V V+ PE G+WQCLLS+ +V ++S I
Sbjct: 892 NLTCEVWGPTSPKLMLSLKLENKAATVSKQAKAVWVLNPEAGMWQCLLSDSGQVLLESNI 1071
Query: 385 QVL 387
+VL
Sbjct: 1072KVL 1080
>gb|AF001224.1|AF001224 Cercopithecus sabaeus CD4 (CD4) mRNA, partial cds
Length = 1192
Score = 320 bits (820), Expect = 2e-85
Identities = 175/363 (48%), Positives = 229/363 (62%), Gaps = 4/363 (1%)
Frame = +1
Query: 29 LVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKG 88
+VLGK+G++ EL C +SQK T F WK S+Q KILG+ G + GS DR DS+K
Sbjct: 1 VVLGKKGDTVELTCNASQKTTTQFHWKNSNQIKILGKQGS--FLTKGSSKLRDRIDSRKS 174
Query: 89 AWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXXXXXXDS 148
W++G F +II LK+EDS+TYICE+EN++EEVEL VF +T + +S
Sbjct: 175 LWDQGCFSMIIKNLKIEDSETYICEVENKEEEVELLVFGLTANSDTHLLQGQSLTLTLES 354
Query: 149 NSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLSVLGF 208
S+P +C+ LS+ L QDS W C V+ DQ F + + VL F
Sbjct: 355 PPG-SSPSVKCRSPRGKNIQGGRTLSVPQLERQDSGTWTCNVSQDQNTVEFKIDIVVLAF 531
Query: 209 QSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
Q + T YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +KNKEVSV+
Sbjct: 532 QKASSTVYKKEGEQVEFSFPLAFTLEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVK 711
Query: 267 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVMKVAQLNN 324
+ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM+ Q
Sbjct: 712 QVTQDPKLQMGKKLPLNLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQFQE 891
Query: 325 TLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRI 384
LTCEV GPTSPK+ L+LK EN+ A VS++ K V V+ PE G+WQCLLS+ +V ++S I
Sbjct: 892 NLTCEVWGPTSPKLMLSLKLENKAATVSKQAKAVWVLNPEAGMWQCLLSDSGQVLLESNI 1071
Query: 385 QVL 387
+VL
Sbjct: 1072KVL 1080
>gb|AF001222.1|AF001222 Cercopithecus tantalus CD4 (CD4) mRNA, partial cds
Length = 1192
Score = 320 bits (819), Expect = 2e-85
Identities = 175/363 (48%), Positives = 228/363 (62%), Gaps = 4/363 (1%)
Frame = +1
Query: 29 LVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKG 88
+VLGK+G++ EL C +SQ T F WK S+Q KILG+ G + GS DR DS+K
Sbjct: 1 VVLGKKGDTVELTCNASQNTTTQFHWKNSNQIKILGKQGS--FLTKGSSKLRDRIDSRKS 174
Query: 89 AWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXXXXXXDS 148
W++G F +II LK+EDS+TYICE+EN+KEEVEL VF +T + +S
Sbjct: 175 LWDQGCFSMIIKNLKIEDSETYICEVENKKEEVELLVFGLTANSDTHLLQGQSLTLTLES 354
Query: 149 NSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLSVLGF 208
S+P +C+ LS+ L QDS W CTV+ DQ F + + VL F
Sbjct: 355 PPG-SSPSVKCRSPRGKNIQGGRTLSVPQLERQDSGTWTCTVSQDQNTVEFKIDIVVLAF 531
Query: 209 QSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
Q + T YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +KNKEVSV+
Sbjct: 532 QKASSTVYKKEGEQVEFSFPLAFTLEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVK 711
Query: 267 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVMKVAQLNN 324
+ T+D KLQ+ + LPL L +PQ Q+AGSGN TL L+ G LHQEVNLVVM+ Q
Sbjct: 712 QVTQDPKLQMGKKLPLNLTLPQALPQYAGSGNFTLALEAKTGKLHQEVNLVVMRATQFQE 891
Query: 325 TLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRI 384
LTCEV GPTSPK+ L+LK EN+ A VS++ K V V+ PE G+WQCLLS+ +V ++S I
Sbjct: 892 NLTCEVWGPTSPKLMLSLKLENKAATVSKQAKAVWVLNPEEGMWQCLLSDSGQVLLESNI 1071
Query: 385 QVL 387
+VL
Sbjct: 1072KVL 1080
>gb|AF001226.1|AF001226 Cercopithecus aethiops CD4 (CD4) mRNA, partial cds
Length = 1192
Score = 319 bits (818), Expect = 3e-85
Identities = 175/363 (48%), Positives = 229/363 (62%), Gaps = 4/363 (1%)
Frame = +1
Query: 29 LVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKG 88
+VLGK+G++ EL C +SQK T F WK S+Q KILG+ G + GS DR DS+K
Sbjct: 1 VVLGKKGDTVELTCNASQKTTTQFHWKNSNQTKILGKQGS--FLTKGSSKLRDRIDSRKS 174
Query: 89 AWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXXXXXXDS 148
W++G F +II LK+EDS+TYICE+EN+KEEVEL VF +T + +S
Sbjct: 175 LWDQGCFSMIIKNLKIEDSETYICEVENKKEEVELLVFGLTANSDTHLLQGQSLTLTLES 354
Query: 149 NSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLSVLGF 208
S+P +C+ LS+ L QDS W CTV+ DQ F + + VL F
Sbjct: 355 PPG-SSPSVKCRSPRGKNIQVGRTLSVPQLERQDSGTWTCTVSQDQNTVEFKIDIVVLAF 531
Query: 209 QSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
Q + T YK EGE EFSFPL E G GEL W+AE+ S + WI+F +KNKEVSV+
Sbjct: 532 QKASSTVYKKEGEQVEFSFPLALTLEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVK 711
Query: 267 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVMKVAQLNN 324
+ T+D +LQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM+ Q
Sbjct: 712 QVTQDPELQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQFQE 891
Query: 325 TLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRI 384
LTCEV GPTSPK+ L+LK EN+ A VS++ K V V+ PE G+WQCLLS+ +V ++S I
Sbjct: 892 NLTCEVWGPTSPKLMLSLKLENKAATVSKQAKAVWVLNPEEGMWQCLLSDSGQVLLESNI 1071
Query: 385 QVL 387
+VL
Sbjct: 1072KVL 1080
>gb|AF001221.1|AF001221 Cercopithecus tantalus CD4 (CD4) mRNA, partial cds
Length = 1192
Score = 319 bits (817), Expect = 4e-85
Identities = 175/363 (48%), Positives = 229/363 (62%), Gaps = 4/363 (1%)
Frame = +1
Query: 29 LVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKG 88
+VLGK+G++ EL C +SQ T F WK S+Q KILG+ G + GS DR DS+K
Sbjct: 1 VVLGKKGDTVELTCNASQNTTTQFHWKNSNQIKILGKQGS--FLTKGSSKLRDRIDSRKS 174
Query: 89 AWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXXXXXXDS 148
W++G F +II LK+EDS+TYICE+EN+KEEVEL VF +T + +S
Sbjct: 175 LWDQGCFSMIIKNLKIEDSETYICEVENKKEEVELLVFGLTANSDTHLLQGQSLTLTLES 354
Query: 149 NSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLSVLGF 208
S+P +C+ LS+ L QDS W CTV+ DQ F + + VL F
Sbjct: 355 PPG-SSPSVKCRSPRGKNIQGGRTLSVPQLERQDSGTWTCTVSQDQNTVEFKIDIVVLAF 531
Query: 209 QSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
Q + T YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +KNKEVSV+
Sbjct: 532 QKASSTVYKKEGEQVEFSFPLAFTLEKLTGSGELRWQAERASSSKSWITFDLKNKEVSVK 711
Query: 267 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVMKVAQLNN 324
+ T+D +LQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM+ Q
Sbjct: 712 QVTQDPELQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQFQE 891
Query: 325 TLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRI 384
LTCEV GPTSPK+ L+LK EN+ A VS++ K V V+ PE G+WQCLLS+ +V ++S I
Sbjct: 892 NLTCEVWGPTSPKLMLSLKLENKAATVSKQAKAVWVLNPEEGMWQCLLSDSGQVLLESNI 1071
Query: 385 QVL 387
+VL
Sbjct: 1072KVL 1080
>emb|X73325.1|MNCD4 M.nemestrina CD4 mRNA
Length = 1192
Score = 318 bits (814), Expect = 9e-85
Identities = 176/363 (48%), Positives = 228/363 (62%), Gaps = 4/363 (1%)
Frame = +1
Query: 29 LVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKG 88
+VLGK+G++ EL C +SQKK T F WK S+Q KILG G + G DR DS+K
Sbjct: 1 VVLGKKGDTVELTCNASQKKNTQFHWKNSNQIKILGIQGS--FLTKGPSKLSDRADSRKS 174
Query: 89 AWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXXXXXXDS 148
W++G F +II LK+EDS TYICE+E+ KEEVEL VF +T + +S
Sbjct: 175 LWDQGHFSMIIKNLKIEDSDTYICEVEDEKEEVELLVFGLTANSDTHLLEGQSLTLTLES 354
Query: 149 NSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLSVLGF 208
S+P +C+ LS+ L QDS W CTV+ DQK F + + VL F
Sbjct: 355 PPG-SSPSVKCRSPGGKNIQGGRTLSVPQLERQDSGTWTCTVSQDQKTVEFKIDIVVLAF 531
Query: 209 QSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
Q + T YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +KNKEVSV+
Sbjct: 532 QKASSTVYKKEGEQVEFSFPLAFTLEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVK 711
Query: 267 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVMKVAQLNN 324
+ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM+ Q
Sbjct: 712 RVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQFQE 891
Query: 325 TLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRI 384
LTCEV GPTSPK+ L+LK EN+ A VS++ K V V+ PE G+WQCLLS+ +V ++S I
Sbjct: 892 NLTCEVWGPTSPKLTLSLKLENKGATVSKQAKAVWVLNPEAGMWQCLLSDSGQVLLESNI 1071
Query: 385 QVL 387
+V+
Sbjct: 1072KVV 1080
>emb|X73326.1|MMCD4 M.mulatta CD4 mRNA
Length = 1192
Score = 317 bits (813), Expect = 1e-84
Identities = 175/363 (48%), Positives = 228/363 (62%), Gaps = 4/363 (1%)
Frame = +1
Query: 29 LVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKG 88
+VLGK+G++ EL C +SQKK T F WK S+Q KILG G + G DR DS+K
Sbjct: 1 VVLGKKGDTVELTCNASQKKNTQFHWKNSNQIKILGIQGS--FLTKGPSKLSDRADSRKS 174
Query: 89 AWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXXXXXXDS 148
W++G F +II LK+EDS TYICE+EN+KEEVEL VF +T + +S
Sbjct: 175 LWDQGCFSMIIKNLKIEDSDTYICEVENKKEEVELLVFGLTANSDTHLLEGQSLTLTLES 354
Query: 149 NSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLSVLGF 208
S+P +C+ +S+ L QDS W CTV+ DQ F + + VL F
Sbjct: 355 PPG-SSPSVKCRSPGGKNIQGGRTISVPQLERQDSGTWTCTVSQDQNTVEFKIDIVVLAF 531
Query: 209 QSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
Q + T YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +KNKEVSV+
Sbjct: 532 QKASSTVYKKEGEQVEFSFPLAFTLEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVK 711
Query: 267 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDK--GTLHQEVNLVVMKVAQLNN 324
+ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM+ Q
Sbjct: 712 QVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQFQE 891
Query: 325 TLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRI 384
LTCEV GPTSPK+ L+LK EN+ A VS++ K V V+ PE G+WQCLLS+ +V ++S I
Sbjct: 892 NLTCEVWGPTSPKLTLSLKLENKGATVSKQAKAVWVLNPEAGMWQCLLSDSGQVLLESNI 1071
Query: 385 QVL 387
+V+
Sbjct: 1072KVV 1080
>emb|X73328.1|CACD42 C.atys CD4 mRNA 2
Length = 1189
Score = 313 bits (803), Expect = 2e-83
Identities = 176/363 (48%), Positives = 230/363 (62%), Gaps = 4/363 (1%)
Frame = +1
Query: 29 LVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKG 88
+VLGK+G++ EL C +SQK T F WK S Q KILG G LI+G S DR DS+K
Sbjct: 1 VVLGKKGDTVELACNASQKS-TQFHWKNSKQIKILGNQGS-FLIKGSSKLS-DRADSRKS 171
Query: 89 AWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXXXXXXDS 148
W++G F +II LK+EDS+TYICE+E++KEEVEL V +T + +S
Sbjct: 172 LWDQGCFSMIIKNLKIEDSETYICEVEDKKEEVELLVLGLTANSDTHLLEGQSLTLTLES 351
Query: 149 NSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLSVLGF 208
S+P +C+ LS+ L QDS W CTV+ DQK F + + VL F
Sbjct: 352 PPG-SSPSVKCRSPRGKNIQGGRTLSVPQLERQDSGTWTCTVSQDQKTVEFKIDIMVLAF 528
Query: 209 QSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
Q + T YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +KNKEVSV+
Sbjct: 529 QKASSTVYKKEGEQVEFSFPLAFTLEELTGSGELWWQAERASSSKSWITFDLKNKEVSVK 708
Query: 267 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGT--LHQEVNLVVMKVAQLNN 324
+ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ T LHQEVNLVVM+ Q
Sbjct: 709 RVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTEKLHQEVNLVVMRATQFQE 888
Query: 325 TLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRI 384
LTCEV GPTSPK+ L+LK EN++A VS++ K V V+ PE G+WQCLLS+ + ++S I
Sbjct: 889 NLTCEVWGPTSPKLTLSLKLENKKATVSKQAKAVWVLNPEAGMWQCLLSDSGQALLESNI 1068
Query: 385 QVL 387
+V+
Sbjct: 1069KVV 1077
>emb|X68565.1|CFCD4 C.familiaris mRNA for T-cell surface glycoprotein CD4
Length = 1297
Score = 301 bits (770), Expect = 1e-79
Identities = 178/426 (41%), Positives = 245/426 (56%), Gaps = 10/426 (2%)
Frame = +2
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFD 81
AVT + +VLGK G++ ELPC++SQKK F W+ S +ILG G + GS
Sbjct: 29 AVTPVREVVLGKAGDAVELPCQTSQKKNIHFNWRDSSMVQILGNQGSFWTV--GSSRLKH 202
Query: 82 RFDSKKGAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXX 141
R +SKK W++GSFPL+I L++ DS Y C+ + R +EVEL VF +T
Sbjct: 203 RVESKKNLWDQGSFPLVIKDLEVADSGIYFCDTDKR-QEVELLVFNLTAKWDSGSSSGSS 379
Query: 142 XXXXXDS--------NSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLD 193
N S+P + K LS+S +QD W C ++
Sbjct: 380 NIRLLQGQQLTLTLENPSGSSPSVQWKGPGNKSKHGGQNLSLSWPELQDGGTWTCIISQS 559
Query: 194 QKKNWFGMTLSVLGFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPW 253
QK F + + VL FQ + T Y EG+ EFSFPL+F +EN GEL W+A+ S W
Sbjct: 560 QKTVEFNINVLVLAFQKVSNTFYAREGDQVEFSFPLSFEDENLVGELRWQAQGASSSLLW 739
Query: 254 ISFSIKNKEVSVQKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVN 313
ISF+++N+++S++++ LKLQ+KE+LPL +PQV ++AGSG LTL L KGTL+QEVN
Sbjct: 740 ISFTLENRKLSMKEAHAPLKLQMKESLPLRFTLPQVLSRYAGSGILTLNLAKGTLYQEVN 919
Query: 314 LVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLS 373
LVVM+ N LTCEV+GPTSP++ L+L + Q A+VS++QK+V VV PE G WQCLLS
Sbjct: 920 LVVMRANSSQNNLTCEVLGPTSPELTLSLNLKEQAAKVSKQQKLVWVVDPEGGTWQCLLS 1099
Query: 374 EGDKVKMDSRIQVLSRGVNQT--VFLACVXXXXXXXXXXXXXXXXXXVRCRHQQRQAARM 431
+ DKV + S + V S V ++ FLA V+C ++RQA RM
Sbjct: 1100DKDKVLLASSLNVSSPVVIKSWPKFLAITLGGILGLLLLIGLCVFCCVKCWRRRRQAERM 1279
Query: 432 SQIKRL 437
SQIKRL
Sbjct: 1280SQIKRL 1297
>gb|M17078.1|MUSCD44 Mouse T-cell differentiation antigen CD4 (L3T4) gene, exon 6, and
brain allele, exon 1
Length = 538
Score = 225 bits (573), Expect = 8e-57
Identities = 112/112 (100%), Positives = 112/112 (100%)
Frame = +2
Query: 207 GFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
GFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVSVQ
Sbjct: 74 GFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 253
Query: 267 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMK 318
KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMK
Sbjct: 254 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMK 409
>gb|AC002397.1|AC002397 Mouse chromosome 6 BAC-284H12 (Research Genetics mouse BAC library)
complete sequence [Mus musculus]
Length = 227538
Score = 225 bits (573), Expect = 8e-57
Identities = 112/112 (100%), Positives = 112/112 (100%)
Frame = +1
Query: 207 GFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
GFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVSVQ
Sbjct: 26287 GFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 26466
Query: 267 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMK 318
KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMK
Sbjct: 26467 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMK 26622
Score = 135 bits (340), Expect = 8e-30
Identities = 67/67 (100%), Positives = 67/67 (100%)
Frame = +1
Query: 319 VAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKV 378
VAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKV
Sbjct: 29002 VAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKV 29181
Query: 379 KMDSRIQ 385
KMDSRIQ
Sbjct: 29182 KMDSRIQ 29202
Score = 116 bits (291), Expect = 4e-24
Identities = 59/73 (80%), Positives = 62/73 (84%), Gaps = 2/73 (2%)
Frame = +1
Query: 57 SDQRKILGQHGKGVLIR--GGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICEL 114
S Q++ G V +R GGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICEL
Sbjct: 23680 SFQQRCQGTSTSFVWLRFAGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICEL 23859
Query: 115 ENRKEEVELWVFK 127
ENRKEEVELWVFK
Sbjct: 23860 ENRKEEVELWVFK 23898
Score = 112 bits (279), Expect = 9e-23
Identities = 55/80 (68%), Positives = 55/80 (68%)
Frame = +1
Query: 128 VTFSPXXXXXXXXXXXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWN 187
VTFSP DSNSKVSNPLTECKH LSMSNLRVQDSDFWN
Sbjct: 24187 VTFSPGTSLLQGQSLTLTLDSNSKVSNPLTECKHKKGKVVSGSKVLSMSNLRVQDSDFWN 24366
Query: 188 CTVTLDQKKNWFGMTLSVLG 207
CTVTLDQKKNWFGMTLSVLG
Sbjct: 24367 CTVTLDQKKNWFGMTLSVLG 24426
Score = 110 bits (275), Expect = 3e-22
Identities = 54/56 (96%), Positives = 54/56 (96%)
Frame = +3
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSP 77
AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRG P
Sbjct: 17406 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGRIP 17573
Score = 50.1 bits (118), Expect = 4e-04
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +2
Query: 425 QRQAARMSQIKRLLSEKKTCQCP 447
QRQAARMSQIKRLLSEKKTCQCP
Sbjct: 30194 QRQAARMSQIKRLLSEKKTCQCP 30262
Score = 42.4 bits (98), Expect = 0.092
Identities = 23/44 (52%), Positives = 24/44 (54%)
Frame = +1
Query: 382 SRIQVLSRGVNQTVFLACVXXXXXXXXXXXXXXXXXXVRCRHQQ 425
S + VLSRGVNQTVFLACV VRCRHQQ
Sbjct: 29728 SLLPVLSRGVNQTVFLACVLGGSFGFLGFLGLCILCCVRCRHQQ 29859
>gb|M36851.1|MUSL3T4AB Mouse T-cell differentiation antigen CD4 (L3T4) gene, exon VI
Length = 423
Score = 225 bits (573), Expect = 8e-57
Identities = 112/112 (100%), Positives = 112/112 (100%)
Frame = +2
Query: 207 GFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
GFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVSVQ
Sbjct: 74 GFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 253
Query: 267 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMK 318
KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMK
Sbjct: 254 KSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMK 409
>gb|U75219.1|MMU75219 Mus musculus mutant T-cell surface glycoprotein CD4 (cd4) mRNA,
partial cds
Length = 273
Score = 151 bits (382), Expect(2) = 5e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 310 QEVNLVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQ 369
QEVNLVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQ
Sbjct: 1 QEVNLVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQ 180
Query: 370 CLLSEGDKVKMDSRIQ 385
CLLSEGDKVKMDSRIQ
Sbjct: 181 CLLSEGDKVKMDSRIQ 228
Score = 29.3 bits (64), Expect(2) = 5e-37
Identities = 14/15 (93%), Positives = 15/15 (99%)
Frame = +2
Query: 425 QRQAARMSQIKRLLS 439
+RQAARMSQIKRLLS
Sbjct: 227 RRQAARMSQIKRLLS 271
>gb|M20265.1|MUSTCSGA Mouse MHC class II T-cell surface glycoprotein CD4 gene, exon x
Length = 295
Score = 151 bits (381), Expect = 1e-34
Identities = 73/73 (100%), Positives = 73/73 (100%)
Frame = +2
Query: 207 GFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 266
GFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVSVQ
Sbjct: 77 GFQSTAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVSVQ 256
Query: 267 KSTKDLKLQLKET 279
KSTKDLKLQLKET
Sbjct: 257 KSTKDLKLQLKET 295
>gb|M17079.1|MUSCD45 Mouse T-cell differentiation antigen CD4 (L3T4) gene, exon 7
Length = 469
Score = 135 bits (340), Expect = 8e-30
Identities = 67/67 (100%), Positives = 67/67 (100%)
Frame = +3
Query: 319 VAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKV 378
VAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKV
Sbjct: 33 VAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKV 212
Query: 379 KMDSRIQ 385
KMDSRIQ
Sbjct: 213 KMDSRIQ 233
>gb|U47924.1|HSU47924 Human chromosome 12p13 sequence, complete sequence [Homo sapiens]
Length = 222930
Score = 120 bits (302), Expect = 2e-25
Identities = 65/115 (56%), Positives = 80/115 (69%), Gaps = 4/115 (3%)
Frame = +2
Query: 208 FQSTAITAYKSEGESAEFSFPLNFAEEN--GWGELMWKAEKDSFFQPWISFSIKNKEVSV 265
FQ + YK EGE EFSFPL F E G GEL W+AE+ S + WI+F +KNKEVSV
Sbjct: 28070 FQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSV 28249
Query: 266 QKSTKDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLD--KGTLHQEVNLVVMK 318
++ T+D KLQ+ + LPL L +PQ Q+AGSGNLTL L+ G LHQEVNLVVM+
Sbjct: 28250 KRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMR 28414
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/65 (56%), Positives = 50/65 (76%)
Frame = +2
Query: 321 QLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKM 380
QL LTCEV GPTSPK+ L+LK EN+EA+VS+ +K V V+ PE G+WQCLLS+ +V +
Sbjct: 29147 QLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGMWQCLLSDSGQVLL 29326
Query: 381 DSRIQ 385
+S I+
Sbjct: 29327 ESNIK 29341
Score = 70.1 bits (170), Expect = 4e-10
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Frame = +2
Query: 54 WKFSDQRKILGQHGKG---VLIRGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTY 110
W FS QR + + + L+ G DR DS++ W++G+FPLII LK+EDS TY
Sbjct: 26081 WAFSCQRCPVSRAPQSPPICLLLPGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 26260
Query: 111 ICELENRKEEVELWVF 126
ICE+E++KEEV+L VF
Sbjct: 26261 ICEVEDQKEEVQLLVF 26308
Score = 56.2 bits (134), Expect = 6e-06
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = +3
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHG 67
A TQGK +VLGK+G++ EL C +SQKK F WK S+Q KILG G
Sbjct: 12330 AATQGKKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQG 12467
Score = 48.1 bits (113), Expect = 0.002
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 425 QRQAARMSQIKRLLSEKKTCQCP 447
QRQA RMSQIKRLLSEKKTCQCP
Sbjct: 30856 QRQAERMSQIKRLLSEKKTCQCP 30924
Score = 41.2 bits (95), Expect = 0.21
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 153 SNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLSVLG 207
S+P +C+ LS+S L +QDS W CTV +QKK F + + VLG
Sbjct: 26842 SSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLG 27006
>gb|M17077.1|MUSCD43 Mouse T-cell differentiation antigen CD4 (L3T4) gene, exons 4 and 5
Length = 905
Score = 116 bits (291), Expect = 4e-24
Identities = 59/73 (80%), Positives = 62/73 (84%), Gaps = 2/73 (2%)
Frame = +1
Query: 57 SDQRKILGQHGKGVLIR--GGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICEL 114
S Q++ G V +R GGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICEL
Sbjct: 127 SFQQRCQGTSTSFVWLRFAGGSPSQFDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICEL 306
Query: 115 ENRKEEVELWVFK 127
ENRKEEVELWVFK
Sbjct: 307 ENRKEEVELWVFK 345
Score = 112 bits (279), Expect = 9e-23
Identities = 55/80 (68%), Positives = 55/80 (68%)
Frame = +3
Query: 128 VTFSPXXXXXXXXXXXXXXDSNSKVSNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWN 187
VTFSP DSNSKVSNPLTECKH LSMSNLRVQDSDFWN
Sbjct: 633 VTFSPGTSLLQGQSLTLTLDSNSKVSNPLTECKHKKGKVVSGSKVLSMSNLRVQDSDFWN 812
Query: 188 CTVTLDQKKNWFGMTLSVLG 207
CTVTLDQKKNWFGMTLSVLG
Sbjct: 813 CTVTLDQKKNWFGMTLSVLG 872
>gb|M17076.1|MUSCD42 Mouse T-cell differentiation antigen CD4 (L3T4) gene, exons 2 and 3
Length = 559
Score = 107 bits (267), Expect = 2e-21
Identities = 53/56 (94%), Positives = 53/56 (94%)
Frame = +2
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSP 77
AVTQ KTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRG P
Sbjct: 359 AVTQEKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGRIP 526
>gb|AF082497.1|AF082497 Marmota monax T-cell surface glycoprotein CD4 (CD4) mRNA, partial
cds
Length = 360
Score = 105 bits (262), Expect = 9e-21
Identities = 55/120 (45%), Positives = 75/120 (61%), Gaps = 2/120 (1%)
Frame = +1
Query: 308 LHQEVNLVVMKVAQLNNTLTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGL 367
LHQEVNLVVM V N L CEV+GPT PK+ L+LK +NQEA+VS+ +K ++V P+ G+
Sbjct: 1 LHQEVNLVVMNVTYHQNDLICEVLGPTPPKLMLSLKLKNQEAKVSKPEKRIRVPNPKAGM 180
Query: 368 WQCLLSEGDKVKMDSRIQVLSRGVN--QTVFLACVXXXXXXXXXXXXXXXXXXVRCRHQQ 425
WQCLL +GDKV +D +I V +N Q +FLA + V+CRH++
Sbjct: 181 WQCLLRDGDKVLLDFQIDVPPTELNQYQPMFLAVIIGGALSFLLLAGLCIFCCVKCRHRR 360
>emb|Y12012.1|GGCD4 G.gallus CD4 mRNA
Length = 1989
Score = 100 bits (250), Expect = 2e-19
Identities = 107/463 (23%), Positives = 182/463 (39%), Gaps = 41/463 (8%)
Frame = +2
Query: 31 LGKEGESAELPCES-SQKKITVFTWKFS--DQRKILGQHGKGVLIRGGSPSQFDRFDSKK 87
+G G+ L C++ + +K TWK+ + + K + +G +P + +
Sbjct: 239 IGIAGKEVILSCKAINNQKDGTCTWKYKYKEVSSTIISFSKAQVFKGKAPM------THR 400
Query: 88 GAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXXXXXXD 147
S L ++ L ++D+ Y C + + L VFK+T S
Sbjct: 401 SELNSNSKKLKVSDLSLDDAGIYTCACYSPVVSISLHVFKLTISSNGHFLTNEDLELTLM 580
Query: 148 SNSKVSNPLTECK-----------HXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKK 196
NS S P K L + L+ DS W C V +
Sbjct: 581 QNSSHSQPHLSIKLFNINNDIVTTEILQEEAPQKYILKLKQLKAIDSGTWMCHVYSNSPS 760
Query: 197 --NWFGMTLSVLGFQSTAITA-YKSEGESAEFSFPLNFAE----ENGWGELMWKAEKDSF 249
+ VLGF+ + Y + G +A S+ LNF + E G+L W+ + ++
Sbjct: 761 INQNISFDVKVLGFEKERLEIIYTTVGNTAILSWRLNFRKIKWKEGFTGKLNWEPQGNTA 940
Query: 250 FQPWISFSIK-NKEVSVQKSTKDLKLQLKETLP---LTLKIPQVSLQFAGSGNLTLTLDK 305
++FS+ ++E+ K + + ++ E + +KIP+V L +G L ++
Sbjct: 941 IHELLNFSVTTHQELHKTKKSNHIWFEISEGKTDGTMDVKIPKVQLNHSGQYKCQLEING 1120
Query: 306 GTLHQEVNLVVMKVAQL---------NNTLTCEVMGPTSPKMRLTLKQEN------QEAR 350
LVVM+V + TL C+V GP L ++ N ++++
Sbjct: 1121RRTESVRALVVMQVTAIPAGPLSRGGKMTLLCQVSGPLPSNAHLLWERVNGTQMEMKKSK 1300
Query: 351 VSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRIQVLSRGV-NQTVFLACVXXXXXXXXX 409
E + V V AP GLW C L E + K+ V V N + +
Sbjct: 1301QHEAKVEVNVSAP--GLWNCHLVEDNNKKISLNYTVEEAHVWNSYAVIGIIIGASVLVIG 1474
Query: 410 XXXXXXXXXVRCRHQQRQAARMSQIKRLLSEKKTCQCPHRMQK 452
+R + ++++A RM+Q K+ L EKKTCQC RM K
Sbjct: 1475LACMCIITGMRWQRRRKRARRMAQAKQYLLEKKTCQCQRRMYK 1603
>gb|AF378701.1|AF378701 Anas platyrhynchos T-cell surface glycoprotein CD4 precursor, mRNA,
complete cds
Length = 1973
Score = 97.1 bits (240), Expect = 3e-18
Identities = 104/464 (22%), Positives = 184/464 (39%), Gaps = 42/464 (9%)
Frame = +1
Query: 31 LGKEGESAELPCESSQKKITVFTWKF---SDQRKILGQHGKGVLIRGGSPSQFDRFDSKK 87
+G EG+ L C+ K +T WK+ + I+ Q G + +G +P S +
Sbjct: 247 IGVEGKEVILNCKKHDKDVT---WKYEYDAGSSAIIIQILAGKIFKGRAPM------SDR 399
Query: 88 GAWEKGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFSPXXXXXXXXXXXXXXD 147
+ S L ++ L++ D+ TYICE + + + L V K+T S
Sbjct: 400 SETNQNSKHLKVSNLRISDAGTYICECGSDRNSISLHVVKLTISSNGYFLPGDDLELTVM 579
Query: 148 SNSKVSNPLTECKHXXXXXXXXX-----------XXLSMSNLRVQDSDFWNCTVTLDQKK 196
S S P L + L+ DS W C + D
Sbjct: 580 HKSPKSQPRFSITLFNSHNSRVTPEVLQNETPQKYALKVKQLQPTDSGTWICNMHSDSPS 759
Query: 197 --NWFGMTLSVLGFQSTAITA-YKSEGESAEFSFPLNFAEENGW-----GELMWKAEKDS 248
+ VLGF+ T + Y + + S+ LNF + GW G+L W+
Sbjct: 760 INENISFNVKVLGFEKTHLERMYAAVDSTVTLSWHLNF-RKIGWKEFFTGQLNWQEGNAI 936
Query: 249 FFQPWISFSIKNKEVSVQKSTKDLKLQL---KETLPLTLKIPQVSLQFAGSGNLTLTLDK 305
++ + + E+ K L++ K + +KI ++ L+ +G L ++
Sbjct: 937 TYELLDFNATADGELRETKKRSQALLEIPEMKRDSTVEVKIHKIQLKHSGEYTCQLLYNR 1116
Query: 306 GTLHQEVNLVVMKVAQ---------LNNTLTCEVMGPTSPKMRLT------LKQENQEAR 350
+ + LVVM+V+ TL C+V P P + L K + ++++
Sbjct: 1117RYIQSKTELVVMQVSANPPGPLPKGAEMTLLCQVSSPIPPNVHLLWERVNGTKMDGKKSK 1296
Query: 351 VSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSR--IQVLSRGVNQTVFLACVXXXXXXXX 408
SE + V+V A G+W C L E + +K+ ++ ++ TV + +
Sbjct: 1297QSETKVEVKVTA--VGMWNCHLMEDNNMKLSLNYTVEEAPTWMSYTV-IGVIIGAGVLMF 1467
Query: 409 XXXXXXXXXXVRCRHQQRQAARMSQIKRLLSEKKTCQCPHRMQK 452
+ R ++++A RM++ ++ L EKKTCQC RM K
Sbjct: 1468VFACLGIMAGMSWRRRRQRAKRMARARQYLLEKKTCQCQPRMNK 1599
>emb|X65629.1|SSCD41 S.scrofa mRNA for CD4 molecule (allele 1, exon 3 and 4)
Length = 299
Score = 96.7 bits (239), Expect = 4e-18
Identities = 52/100 (52%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Frame = +2
Query: 33 KEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQF-DRFDSKKGAWE 91
K G+ AELPC SSQKK F WK S+Q KILG HG S ++ R DSKK W+
Sbjct: 2 KAGDLAELPCHSSQKKNLPFNWKNSNQTKILGGHGS--FWHTASVTELTSRLDSKKNMWD 175
Query: 92 KGSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFS 131
GSFPLII L++ DS YICE+E+++ EV+L VF++T S
Sbjct: 176 HGSFPLIIKNLEVTDSGIYICEVEDKRIEVQLLVFRLTAS 295
>emb|X65630.1|SSCD42 S.scrofa mRNA for CD4 molecule (allele 2, exon 3 and 4)
Length = 299
Score = 95.9 bits (237), Expect = 7e-18
Identities = 50/99 (50%), Positives = 65/99 (65%)
Frame = +2
Query: 33 KEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKGAWEK 92
K G+ AELPC SSQKK F+WK SDQ KIL H + + + R DSKK W+
Sbjct: 2 KAGDLAELPCHSSQKKNLPFSWKNSDQIKILRSH-RNLWHKASVTELSSRLDSKKNMWDH 178
Query: 93 GSFPLIINKLKMEDSQTYICELENRKEEVELWVFKVTFS 131
GSFPLII L++ DS YICE+E+++ EV+L VF++T S
Sbjct: 179 GSFPLIIKNLEVTDSGIYICEVEDKRIEVQLLVFRLTAS 295
>emb|X87579.1|HSCD4ALU H.sapiens CD4 gene
Length = 13133
Score = 56.2 bits (134), Expect = 6e-06
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = +1
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHG 67
A TQGK +VLGK+G++ EL C +SQKK F WK S+Q KILG G
Sbjct: 11113 AATQGKKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQG 11250
>gb|S79267.1|S79267 CD4 receptor {exons 1 and 2} [human, T-lymphocyte, mRNA, 3429 nt]
Length = 3429
Score = 56.2 bits (134), Expect = 6e-06
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = +2
Query: 22 AVTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHG 67
A TQGK +VLGK+G++ EL C +SQKK F WK S+Q KILG G
Sbjct: 1409 AATQGKKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQG 1546
>gb|M17080.1|MUSCD46 Mouse T-cell differentiation antigen CD4 (L3T4) gene, exons 8-10
Length = 2036
Score = 50.1 bits (118), Expect = 4e-04
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +1
Query: 425 QRQAARMSQIKRLLSEKKTCQCP 447
QRQAARMSQIKRLLSEKKTCQCP
Sbjct: 598 QRQAARMSQIKRLLSEKKTCQCP 666
Score = 42.4 bits (98), Expect = 0.092
Identities = 23/44 (52%), Positives = 24/44 (54%)
Frame = +2
Query: 382 SRIQVLSRGVNQTVFLACVXXXXXXXXXXXXXXXXXXVRCRHQQ 425
S + VLSRGVNQTVFLACV VRCRHQQ
Sbjct: 131 SLLPVLSRGVNQTVFLACVLGGSFGFLGFLGLCILCCVRCRHQQ 262
>emb|AL591520.5|AL591520 Zebrafish DNA sequence from clone XX-138M20, complete sequence [Danio
rerio]
Length = 100721
Score = 49.7 bits (117), Expect = 6e-04
Identities = 37/95 (38%), Positives = 52/95 (53%), Gaps = 4/95 (4%)
Frame = -2
Query: 30 VLGKEGESAELPC--ESSQKKITVFTWKFSDQRKILGQHGKGVLIRGG-SPSQFDRFDSK 86
V+G+EGESA L C ESS + +F W R + Q + +L++G S +QF D +
Sbjct: 46696 VIGREGESATLSCLYESSSSHVLLF-WG----RILPNQAPEFLLLKGARSETQFQSVDPR 46532
Query: 87 -KGAWEKGSFPLIINKLKMEDSQTYICELENRKEE 120
A K + LIIN LK+ED+ +Y C LE E
Sbjct: 46531 YDSATSKTATFLIINNLKLEDTASYYCVLEEHSNE 46427
>emb|AL591597.8|AL591597 Zebrafish DNA sequence from clone XX-244O13, complete sequence [Danio
rerio]
Length = 40756
Score = 48.1 bits (113), Expect = 0.002
Identities = 36/95 (37%), Positives = 52/95 (53%), Gaps = 4/95 (4%)
Frame = +2
Query: 30 VLGKEGESAELPC--ESSQKKITVFTWKFSDQRKILGQHGKGVLIRGG-SPSQFDRFDSK 86
V+G+EG+SA L C ESS + +F W R + Q + +L++G S +QF D +
Sbjct: 9233 VIGREGDSATLSCLYESSSSHVLLF-WG----RILPKQAPEFLLLKGARSETQFQSVDPR 9397
Query: 87 -KGAWEKGSFPLIINKLKMEDSQTYICELENRKEE 120
A K + LIIN LK+ED +Y C LE +E
Sbjct: 9398 YDSATSKTATFLIINNLKLEDKASYYCVLEEHSDE 9502
>emb|AL591511.2|AL591511 Zebrafish DNA sequence from clone XX-1C23, complete sequence [Danio
rerio]
Length = 74508
Score = 47.0 bits (110), Expect = 0.004
Identities = 36/95 (37%), Positives = 51/95 (52%), Gaps = 4/95 (4%)
Frame = +3
Query: 30 VLGKEGESAELPC--ESSQKKITVFTWKFSDQRKILGQHGKGVLIRGG-SPSQFDRFDSK 86
V+G+EGESA L C ESS + +F W R + Q + +L++G S +QF D +
Sbjct: 61194 VIGREGESATLSCLYESSSSHVLLF-WG----RILPKQAPEFLLLKGARSETQFQSVDPR 61358
Query: 87 -KGAWEKGSFPLIINKLKMEDSQTYICELENRKEE 120
A K + LIIN L +ED +Y C LE +E
Sbjct: 61359 YDSATSKTATFLIINNLTLEDKASYYCVLEEHSDE 61463
>gb|U40625.1|HSU40625 Human surface glycoprotein variant (CD4) mRNA, partial cds
Length = 237
Score = 41.2 bits (95), Expect = 0.21
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +3
Query: 153 SNPLTECKHXXXXXXXXXXXLSMSNLRVQDSDFWNCTVTLDQKKNWFGMTLSVLGF 208
S+P +C+ LS+S L +QDS W CTV +QKK F + + VL F
Sbjct: 69 SSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAF 236
>gb|AF029989.1|AF029989 Homo sapiens immunoglobulin light chain VK region (HBS7K) mRNA,
partial cds
Length = 321
Score = 40.4 bits (93), Expect = 0.35
Identities = 28/94 (29%), Positives = 42/94 (43%), Gaps = 3/94 (3%)
Frame = +1
Query: 23 VTQGKTLVLGKEGESAELPCESSQKKITVFTW---KFSDQRKILGQHGKGVLIRGGSPSQ 79
+TQ + + G+S + C +SQ W K K+L ++GG PS+
Sbjct: 7 LTQSPSFLSASIGDSVTITCRTSQDIDNYLAWYQQKPGKAPKLLVYSASA--LQGGVPSR 180
Query: 80 FDRFDSKKGAWEKGSFPLIINKLKMEDSQTYICE 113
F G+ + F L IN L+ EDS TY C+
Sbjct: 181 FS------GSGSRTDFTLTINSLQPEDSATYYCQ 264
>gb|U75218.1|MMU75218 Mus musculus mutant T-cell surface glycoprotein CD4 gene, mutant
intron
Length = 240
Score = 38.5 bits (88), Expect = 1.3
Identities = 21/42 (50%), Positives = 22/42 (52%)
Frame = +2
Query: 382 SRIQVLSRGVNQTVFLACVXXXXXXXXXXXXXXXXXXVRCRH 423
S + VLSRGVNQTVFLACV VRCRH
Sbjct: 29 SLLPVLSRGVNQTVFLACVLGGSFGFLGFLGLCILCCVRCRH 154
>gb|M14362.1|HUMATCCD2 Human T-cell surface antigen CD2 (T11) mRNA, complete cds
Length = 1510
Score = 38.1 bits (87), Expect = 1.7
Identities = 40/183 (21%), Positives = 81/183 (43%), Gaps = 4/183 (2%)
Frame = +1
Query: 210 STAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVSVQKST 269
+ A+ + + G+ P +F + ++ W+ D + I+ K KE +K T
Sbjct: 91 TNALETWGALGQDINLDIP-SFQMSDDIDDIKWEKTSD---KKKIAQFRKEKETFKEKDT 258
Query: 270 ----KDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMKVAQLNNT 325
K+ L++K I +VS+ N+ + + + V+ + +N T
Sbjct: 259 YKLFKNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISWTCINTT 438
Query: 326 LTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRIQ 385
LTCEVM T P+ L L Q+ + ++S+ + + ++C + G+KV +S ++
Sbjct: 439 LTCEVMNGTDPE--LNLYQDGKHLKLSQRVITHKWTTSLSAKFKC--TAGNKVSKESSVE 606
Query: 386 VLS 388
+S
Sbjct: 607 PVS 615
>ref|NM_001767.1| Homo sapiens CD2 antigen (p50), sheep red blood cell receptor
(CD2), mRNA
Length = 1504
Score = 38.1 bits (87), Expect = 1.7
Identities = 40/183 (21%), Positives = 81/183 (43%), Gaps = 4/183 (2%)
Frame = +1
Query: 210 STAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVSVQKST 269
+ A+ + + G+ P +F + ++ W+ D + I+ K KE +K T
Sbjct: 88 TNALETWGALGQDINLDIP-SFQMSDDIDDIKWEKTSD---KKKIAQFRKEKETFKEKDT 255
Query: 270 ----KDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMKVAQLNNT 325
K+ L++K I +VS+ N+ + + + V+ + +N T
Sbjct: 256 YKLFKNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISWTCINTT 435
Query: 326 LTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRIQ 385
LTCEVM T P+ L L Q+ + ++S+ + + ++C + G+KV +S ++
Sbjct: 436 LTCEVMNGTDPE--LNLYQDGKHLKLSQRVITHKWTTSLSAKFKC--TAGNKVSKESSVE 603
Query: 386 VLS 388
+S
Sbjct: 604 PVS 612
>gb|M16445.1|HUMANTCD2 Human surface antigen CD2 mRNA, complete cds
Length = 1504
Score = 38.1 bits (87), Expect = 1.7
Identities = 40/183 (21%), Positives = 81/183 (43%), Gaps = 4/183 (2%)
Frame = +1
Query: 210 STAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVSVQKST 269
+ A+ + + G+ P +F + ++ W+ D + I+ K KE +K T
Sbjct: 88 TNALETWGALGQDINLDIP-SFQMSDDIDDIKWEKTSD---KKKIAQFRKEKETFKEKDT 255
Query: 270 ----KDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMKVAQLNNT 325
K+ L++K I +VS+ N+ + + + V+ + +N T
Sbjct: 256 YKLFKNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISWTCINTT 435
Query: 326 LTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRIQ 385
LTCEVM T P+ L L Q+ + ++S+ + + ++C + G+KV +S ++
Sbjct: 436 LTCEVMNGTDPE--LNLYQDGKHLKLSQRVITHKWTTSLSAKFKC--TAGNKVSKESSVE 603
Query: 386 VLS 388
+S
Sbjct: 604 PVS 612
>gb|M16336.1|HUMCD2A Human T-cell surface antigen CD2 (T11) mRNA, complete cds, clone
PB1
Length = 1522
Score = 38.1 bits (87), Expect = 1.7
Identities = 40/183 (21%), Positives = 81/183 (43%), Gaps = 4/183 (2%)
Frame = +3
Query: 210 STAITAYKSEGESAEFSFPLNFAEENGWGELMWKAEKDSFFQPWISFSIKNKEVSVQKST 269
+ A+ + + G+ P +F + ++ W+ D + I+ K KE +K T
Sbjct: 105 TNALETWGALGQDINLDIP-SFQMSDDIDDIKWEKTSD---KKKIAQFRKEKETFKEKDT 272
Query: 270 ----KDLKLQLKETLPLTLKIPQVSLQFAGSGNLTLTLDKGTLHQEVNLVVMKVAQLNNT 325
K+ L++K I +VS+ N+ + + + V+ + +N T
Sbjct: 273 YKLFKNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISWTCINTT 452
Query: 326 LTCEVMGPTSPKMRLTLKQENQEARVSEEQKVVQVVAPETGLWQCLLSEGDKVKMDSRIQ 385
LTCEVM T P+ L L Q+ + ++S+ + + ++C + G+KV +S ++
Sbjct: 453 LTCEVMNGTDPE--LNLYQDGKHLKLSQRVITHKWTTSLSAKFKC--TAGNKVSKESSVE 620
Query: 386 VLS 388
+S
Sbjct: 621 PVS 629
>gb|L40650.1|HUMIKCJ Homo sapiens (clone BCPBL2-2) immunoglobulin kappa light chain
mRNA, partial cds
Length = 306
Score = 36.6 bits (83), Expect = 5.1
Identities = 29/82 (35%), Positives = 39/82 (47%)
Frame = +1
Query: 35 GESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKGAWEKGS 94
GE A L C +SQ IT + F ++ GQ K +LI S D G+
Sbjct: 22 GERATLSCRASQNVITNY---FGWYQQKAGQAPK-LLIYHASTRATGIPDRFSGSGSGTD 189
Query: 95 FPLIINKLKMEDSQTYICELEN 116
F L I++L+ EDS Y C+L N
Sbjct: 190 FTLTISRLEPEDSAVYYCQLYN 255
>dbj|AK025940.1|AK025940 Homo sapiens cDNA: FLJ22287 fis, clone HRC04104
Length = 1708
Score = 36.6 bits (83), Expect = 5.1
Identities = 25/82 (30%), Positives = 32/82 (38%)
Frame = +1
Query: 35 GESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKGAWEKGS 94
G + ELPC +S I W ++ G P D W K
Sbjct: 808 GHTVELPCTASGYPIPAIRW-----------------LKDGRPPPAD------SRWTKRI 918
Query: 95 FPLIINKLKMEDSQTYICELEN 116
L I+ L+ EDS TYICE+ N
Sbjct: 919 TGLTISDLRTEDSGTYICEVTN 984
>ref|XM_052054.4| Homo sapiens Downs syndrome cell adhesion molecule like 1
(DSCAML1), mRNA
Length = 6210
Score = 36.2 bits (82), Expect = 6.6
Identities = 25/82 (30%), Positives = 32/82 (38%)
Frame = +1
Query: 35 GESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKGAWEKGS 94
G + ELPC +S I W ++ G P D W K
Sbjct: 211 GHTVELPCTASGYPIPAIRW-----------------LKDGRPLPAD------SRWTKRI 321
Query: 95 FPLIINKLKMEDSQTYICELEN 116
L I+ L+ EDS TYICE+ N
Sbjct: 322 TGLTISDLRTEDSGTYICEVTN 387
>dbj|AB032958.1|AB032958 Homo sapiens mRNA for KIAA1132 protein, partial cds
Length = 6025
Score = 36.2 bits (82), Expect = 6.6
Identities = 25/82 (30%), Positives = 32/82 (38%)
Frame = +2
Query: 35 GESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKGAWEKGS 94
G + ELPC +S I W ++ G P D W K
Sbjct: 26 GHTVELPCTASGYPIPAIRW-----------------LKDGRPLPAD------SRWTKRI 136
Query: 95 FPLIINKLKMEDSQTYICELEN 116
L I+ L+ EDS TYICE+ N
Sbjct: 137 TGLTISDLRTEDSGTYICEVTN 202
>dbj|AP002342.3|AP002342 Homo sapiens genomic DNA, chromosome 11q clone:CTD-2258N2, complete
sequences
Length = 174548
Score = 36.2 bits (82), Expect = 6.6
Identities = 25/82 (30%), Positives = 32/82 (38%)
Frame = -1
Query: 35 GESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKGAWEKGS 94
G + ELPC +S I W ++ G P D W K
Sbjct: 97526 GHTVELPCTASGYPIPAIRW-----------------LKDGRPLPAD------SRWTKRI 97416
Query: 95 FPLIINKLKMEDSQTYICELEN 116
L I+ L+ EDS TYICE+ N
Sbjct: 97415 TGLTISDLRTEDSGTYICEVTN 97350
>gb|AF334384.1|AF334384 Homo sapiens Down syndrome cell adhesion molecule DSCAML1 (DSCAML1)
mRNA, complete cds
Length = 6811
Score = 36.2 bits (82), Expect = 6.6
Identities = 25/82 (30%), Positives = 32/82 (38%)
Frame = +2
Query: 35 GESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDRFDSKKGAWEKGS 94
G + ELPC +S I W ++ G P D W K
Sbjct: 812 GHTVELPCTASGYPIPAIRW-----------------LKDGRPLPAD------SRWTKRI 922
Query: 95 FPLIINKLKMEDSQTYICELEN 116
L I+ L+ EDS TYICE+ N
Sbjct: 923 TGLTISDLRTEDSGTYICEVTN 988
>emb|Z00021.1|HSIGK20 H.sapiens rearranged DNA for kappa immunoglobulin subgroup V kappa
III
Length = 1040
Score = 35.8 bits (81), Expect = 8.6
Identities = 29/91 (31%), Positives = 42/91 (45%)
Frame = +3
Query: 23 VTQGKTLVLGKEGESAELPCESSQKKITVFTWKFSDQRKILGQHGKGVLIRGGSPSQFDR 82
+TQ + GESA L C +SQ + W + +R GQ + +LIR S
Sbjct: 624 LTQSPGTLSLSPGESATLSCRASQSVSSNLAW-YQQKR---GQSPR-LLIRDASSRANGI 788
Query: 83 FDSKKGAWEKGSFPLIINKLKMEDSQTYICE 113
D G+ F LII++L+ ED Y C+
Sbjct: 789 PDRFSGSGSGTDFTLIISRLEPEDFAVYYCQ 881
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 19, 2002 12:00 AM
Number of letters in database: 587,334,133
Number of sequences in database: 1,164,257
Lambda K H
0.316 0.130 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,231,500,296
Number of Sequences: 1164257
Number of extensions: 26859723
Number of successful extensions: 117213
Number of sequences better than 10.0: 146
Number of HSP's better than 10.0 without gapping: 32438
Number of HSP's successfully gapped in prelim test: 5318
Number of HSP's that attempted gapping in prelim test: 72378
Number of HSP's gapped (non-prelim): 65195
length of query: 457
length of database: 1,627,433,809
effective HSP length: 138
effective length of query: 319
effective length of database: 1,466,766,343
effective search space: 467898463417
effective search space used: 467898463417
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)