TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(461 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,165,784 sequences; 601,717,568 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_009030.1| Mus musculus retinoblastoma binding protei... 964 0.0
gb|U35141.1|MMU35141 Mus musculus retinoblastoma-binding pr... 964 0.0
gb|BC003092.1|BC003092 Homo sapiens, Similar to retinoblast... 890 0.0
ref|NM_005610.1| Homo sapiens retinoblastoma binding protei... 890 0.0
emb|X74262.1|HSRBAP48 H.sapiens RbAp48 mRNA encoding retino... 890 0.0
ref|XM_018112.5| Homo sapiens retinoblastoma binding protei... 890 0.0
gb|AF097750.1|AF097750 Gallus gallus chromatin assembly fac... 884 0.0
gb|AF073787.1|AF073787 Xenopus laevis retinoblastoma A asso... 870 0.0
emb|X71810.1|HSIEF9306 H.sapiens IEF 9306 mRNA 843 0.0
ref|NM_079630.1| Drosophila melanogaster Chromatin assembly... 807 0.0
gb|AY061408.1| Drosophila melanogaster LD33761 full length ... 807 0.0
gb|U62388.1|DMU62388 Drosophila melanogaster chromatin asse... 807 0.0
gb|AF279275.1|AF279275 Gallus gallus Rbap46 polypeptide mRN... 799 0.0
ref|NM_009031.1| Mus musculus retinoblastoma binding protei... 798 0.0
gb|U35142.1|MMU35142 Mus musculus retinoblastoma-binding pr... 798 0.0
ref|NM_002893.2| Homo sapiens retinoblastoma binding protei... 798 0.0
ref|NM_031816.1| Rattus norvegicus retinoblastoma binding p... 798 0.0
gb|AF090306.1|AF090306 Rattus norvegicus retinoblastoma bin... 798 0.0
emb|X72841.1|HSIEF7442 H.sapiens IEF 7442 mRNA 798 0.0
gb|BC003785.1|BC003785 Mus musculus, retinoblastoma binding... 798 0.0
gb|U35143.1|HSU35143 Human retinoblastoma-binding protein (... 798 0.0
ref|XM_030423.1| Homo sapiens similar to retinoblastoma bin... 789 0.0
ref|XM_010272.2| Homo sapiens retinoblastoma binding protei... 545 0.0
gb|BC015123.1|BC015123 Homo sapiens, Similar to retinoblast... 762 0.0
emb|AL390237.9|AL390237 Human DNA sequence from clone RP11-... 409 0.0
ref|XM_069157.2| Homo sapiens similar to CHROMATIN ASSEMBLY... 696 0.0
ref|XM_063256.2| Homo sapiens similar to retinoblastoma bin... 683 0.0
gb|AE000658.1|HUAE000658 Homo sapiens T-cell receptor alpha... 634 0.0
ref|NM_060151.1| chromatin assembly factor 1 P55 subunit like 640 0.0
gb|AF116530.1|AF116530 Caenorhabditis elegans synthetic mul... 640 0.0
emb|AL512427.10|AL512427 Human DNA sequence from clone RP11... 631 e-179
gb|AY059874.1| Arabidopsis thaliana WD-40 repeat protein MS... 589 e-166
ref|NM_125208.1| Arabidopsis thaliana chromosome 5 CHR5v12... 589 e-166
gb|AF016846.1|AF016846 Arabidopsis thaliana WD-40 repeat pr... 589 e-166
gb|AF016845.1|AF016845 Lycopersicon esculentum WD-40 repeat... 585 e-165
ref|XM_069195.1| Homo sapiens similar to Chromatin assembly... 583 e-164
gb|AF440219.1|AF440219 Zea mays cultivar B73 MSI type nucle... 581 e-164
emb|Z81097.1|CEK07A1 Caenorhabditis elegans cosmid K07A1, c... 303 e-162
gb|AF297468.1|AF297468 Schistosoma mansoni strain NMRI chro... 461 e-128
ref|NM_060150.1| retinablastoma-binding protein RBAP46 like 458 e-127
gb|AC009904.7| Drosophila melanogaster, chromosome 3R, regi... 451 e-125
gb|AE003708.2|AE003708 Drosophila melanogaster genomic scaf... 451 e-125
gb|AY056814.1| Arabidopsis thaliana At2g16780/T24I21.19 mRN... 448 e-124
ref|NM_127230.1| Arabidopsis thaliana chromosome 2 CHR2v12... 448 e-124
gb|AF016847.1|AF016847 Arabidopsis thaliana WD-40 repeat pr... 447 e-124
ref|NM_119671.1| Arabidopsis thaliana chromosome 4 CHR4v12... 445 e-123
gb|AF016848.1|AF016848 Arabidopsis thaliana WD-40 repeat pr... 442 e-122
emb|AL031324.2|SPCC1672 S.pombe chromosome III cosmid c1672 358 8e-97
dbj|AB019228.1|AB019228 Arabidopsis thaliana genomic DNA, c... 191 2e-88
emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of E... 315 6e-84
emb|Z97210.2|SPAC29A4 S.pombe chromosome I cosmid c29A4 250 3e-76
gb|U18795.1|SCE9669 Saccharomyces cerevisiae chromosome V c... 283 2e-74
gb|AF250047.1|AF250047 Zea mays WD-repeat protein RBAP1 (rb... 229 5e-58
gb|AF384037.1|AF384037 Zea mays nucleosome/chromatin assemb... 229 5e-58
gb|AF028711.1|AF028711 Arabidopsis thaliana WD-40 repeat pr... 223 4e-56
gb|AY057655.1| Arabidopsis thaliana At2g19520/F3P11.12 mRNA... 222 5e-56
ref|NM_127510.1| Arabidopsis thaliana chromosome 2 CHR2v12... 222 5e-56
gb|AY059799.1| Arabidopsis thaliana putative WD-40 repeat p... 222 5e-56
emb|AL114645.1|CNS01BST Botrytis cinerea strain T4 cDNA lib... 221 9e-56
emb|Y18517.1|SLA18517 Silene latifolia mRNA for Y1 protein 220 3e-55
emb|Y18519.1|SLA18519 Silene latifolia mRNA for X1 protein 220 3e-55
ref|NM_119118.1| Arabidopsis thaliana chromosome 4 CHR4v12... 216 5e-54
emb|Z21487.1|SCCHRIIFG S.cerevisiae RIM, MSI1, PGI, and rib... 194 1e-47
emb|Z98944.1|SPAC25H1 S.pombe chromosome I cosmid c25H1 194 1e-47
emb|Z36064.1|SCYBR195C S.cerevisiae chromosome II reading f... 194 1e-47
gb|M27300.1|YSCMSI1 S.cerevisiae MSI1 gene, complete cds 194 1e-47
emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosom... 139 9e-41
emb|AL035522.1|ATT12J5 Arabidopsis thaliana DNA chromosome ... 139 9e-41
emb|AL022023.1|ATM4E13 Arabidopsis thaliana DNA chromosome ... 139 9e-41
ref|XM_067237.1| Homo sapiens similar to Rbap46 polypeptide... 171 1e-40
gb|AC005825.3|AC005825 Arabidopsis thaliana chromosome II s... 160 8e-39
ref|NM_127512.1| Arabidopsis thaliana chromosome 2 CHR2v12... 161 1e-37
gb|AF370506.1|AF370506 Arabidopsis thaliana putative WD-40 ... 161 1e-37
gb|AC007054.24|AC007054 Drosophila melanogaster, chromosome... 132 7e-29
gb|AY071477.1| Drosophila melanogaster RE55020 full length ... 132 7e-29
gb|AE003785.2|AE003785 Drosophila melanogaster genomic scaf... 132 7e-29
emb|AL353012.1|SPBC1711 S.pombe chromosome II cosmid c1711 130 3e-28
ref|NM_031485.1| Homo sapiens glutamate rich WD repeat prot... 123 3e-26
gb|BC002440.1|BC002440 Homo sapiens, Similar to CG12792 gen... 123 3e-26
gb|AF337808.1|AF337808 Homo sapiens glutamate rich WD repea... 123 3e-26
gb|BC008121.1|BC008121 Mus musculus, Similar to glutamate r... 122 7e-26
emb|Z48622.1|SC9553 S.cerevisiae chromosome XIII cosmid 9553 119 5e-25
ref|NM_065690.1| Caenorhabditis elegans 111 1e-22
gb|M21696.1|YSCPPG S.cerevisiae phosphoglucoisomerase 1 (PG... 106 5e-21
gb|AC021043.4|AC021043 Arabidopsis thaliana chromosome I BA... 96 9e-18
ref|NM_102666.1| Arabidopsis thaliana chromosome 1 CHR1v12... 96 9e-18
gb|AF130973.1|AF130973 Arabidopsis thaliana peroxisomal tar... 96 9e-18
dbj|AP003593.1|AP003593 Nostoc sp. PCC 7120 DNA, complete g... 93 5e-17
gb|AF430070.1|AF430070 Gossypium hirsutum peroxisomal targe... 93 5e-17
emb|AJ009770.1|HSA9770 Homo sapiens mRNA for putative trans... 92 1e-16
ref|XM_001872.3| Homo sapiens TAF5-like RNA polymerase II, ... 92 1e-16
ref|NM_014409.1| Homo sapiens TAF5-like RNA polymerase II, ... 92 1e-16
gb|AF069736.1|AF069736 Homo sapiens PCAF associated factor ... 92 1e-16
ref|XM_050783.1| Homo sapiens similar to TAF5-like RNA poly... 92 1e-16
gb|BC013550.1|BC013550 Mus musculus, Similar to PCAF associ... 91 2e-16
dbj|D30014.1|RICEN20522 Rice mRNA EN205, partial sequence 90 5e-16
ref|NM_120923.1| Arabidopsis thaliana chromosome 5 CHR5v12... 89 9e-16
gb|U76560.1|HSU76560 Human peroxisome targeting signal 2 re... 88 1e-15
gb|BC006268.1|BC006268 Homo sapiens, peroxisomal biogenesis... 88 1e-15
ref|NM_000288.1| Homo sapiens peroxisomal biogenesis factor... 88 1e-15
gb|AE003554.2|AE003554 Drosophila melanogaster genomic scaf... 88 1e-15
gb|U88871.1|HSU88871 Human HsPex7p (HsPEX7) mRNA, complete cds 88 1e-15
gb|AC010019.4| Drosophila melanogaster 3L BAC RP98-6F6 (Ros... 88 1e-15
gb|AC024818.1| Caenorhabditis elegans cosmid Y54H5A, comple... 88 1e-15
emb|AL023833.1|CEY21F11A Caenorhabditis elegans cosmid Y21F... 87 3e-15
ref|XM_081279.1| similar to LD24014p (D. melanogaster), mRNA 87 4e-15
gb|AY051695.1| Drosophila melanogaster LD24014 full length ... 87 4e-15
gb|U75309.1|HSU75309 Human TBP-associated factor (hTAFII100... 85 2e-14
gb|AF315714.1|AF315714 Ipomoea nil COP1 mRNA, complete cds 85 2e-14
ref|NM_006951.1| Homo sapiens TATA box binding protein (TBP... 85 2e-14
emb|X95525.1|HSTAFII10 H.sapiens mRNA for TAFII100 protein 85 2e-14
gb|U80191.1|HSU80191 Human TFIID subunit TAFII100 mRNA, com... 85 2e-14
ref|XM_031978.3| Homo sapiens TAF5 RNA polymerase II, TATA ... 85 2e-14
gb|L24437.1|ATHCOP1A Arabidopsis thaliana (COP1) regulatory... 84 2e-14
gb|AF250048.1|AF250048 Zea mays WD-repeat protein RBAP2 (rb... 84 2e-14
ref|NM_122250.1| Arabidopsis thaliana chromosome 5 CHR5v12... 84 2e-14
dbj|AP003581.1|AP003581 Nostoc sp. PCC 7120 DNA, complete g... 84 3e-14
dbj|AK004687.1|AK004687 Mus musculus adult male lung cDNA, ... 83 6e-14
ref|NM_008822.1| Mus musculus peroxisome biogenesis factor ... 83 6e-14
gb|U69171.1|MMU69171 Mus musculus peroxisomal PTS2 receptor... 83 6e-14
ref|NM_128855.1| Arabidopsis thaliana chromosome 2 CHR2v12... 82 8e-14
gb|AF242546.1|AF242546 Homo sapiens YTM1 mRNA, complete cds 82 8e-14
dbj|AK001743.1|AK001743 Homo sapiens cDNA FLJ10881 fis, clo... 82 1e-13
ref|XM_087024.1| Homo sapiens WD repeat domain 12 (WDR12), ... 82 1e-13
ref|NM_018256.2| Homo sapiens WD repeat domain 12 (WDR12), ... 82 1e-13
dbj|AK022782.1|AK022782 Homo sapiens cDNA FLJ12720 fis, clo... 82 1e-13
dbj|AK022781.1|AK022781 Homo sapiens cDNA FLJ12719 fis, clo... 82 1e-13
dbj|AK056092.1|AK056092 Homo sapiens cDNA FLJ31530 fis, clo... 82 1e-13
gb|BC008082.1|BC008082 Homo sapiens, clone MGC:835 IMAGE:30... 82 1e-13
gb|AF443204.1|AF443204 Chlamydomonas reinhardtii WD40-repea... 82 1e-13
ref|NM_106276.1| Arabidopsis thaliana chromosome 1 CHR1v12... 82 1e-13
dbj|AK003477.1|AK003477 Mus musculus 18 days embryo whole b... 74 2e-13
dbj|AK016611.1|AK016611 Mus musculus adult male testis cDNA... 81 2e-13
dbj|AK007500.1|AK007500 Mus musculus 10 day old male pancre... 81 2e-13
gb|AY059432.1| Mus musculus MTA.A10.069 WD repeat domain 12... 81 2e-13
gb|BC004748.1|BC004748 Mus musculus, WD repeat domain 12, c... 81 2e-13
gb|AY059431.1| Mus musculus WD repeat domain 12 (Wdr12) mRN... 81 2e-13
ref|NM_021312.1| Mus musculus WD repeat domain 12 (Wdr12), ... 81 2e-13
dbj|AB041608.1|AB041608 Mus musculus brain cDNA, clone MNCb... 81 2e-13
gb|AF239765.1|AF239765 Mus musculus nuclear protein Ytm1p m... 81 2e-13
gb|AF029984.1|AF029984 Lycopersicon esculentum COP1 homolog... 80 4e-13
dbj|AP003588.1|AP003588 Nostoc sp. PCC 7120 DNA, complete g... 80 5e-13
ref|NM_128165.1| Arabidopsis thaliana chromosome 2 CHR2v12... 79 1e-12
dbj|AB044749.1|AB044749 Homo sapiens mRNA for WDC146, compl... 79 1e-12
gb|AF115313.1|AF115313 Thermomonospora curvata PkwR (pkwR) ... 78 2e-12
ref|NM_015426.1| Homo sapiens DKFZP434C245 protein (DKFZP43... 77 3e-12
gb|BC007417.1|BC007417 Homo sapiens, Similar to RIKEN cDNA ... 77 3e-12
ref|NM_005647.1| Homo sapiens transducin (beta)-like 1 (TBL... 76 6e-12
emb|Y12781.1|HSTBL1 Homo sapiens mRNA for transducin (beta)... 76 6e-12
dbj|AB025245.1|AB025245 Xenopus laevis mRNA for coronin hom... 76 6e-12
ref|NM_064584.1| six WD40 repeats 76 6e-12
ref|XM_010334.6| Homo sapiens similar to transducin (beta)-... 76 6e-12
gb|U49437.1|BGU49437 Biomphalaria glabrata RACK mRNA, compl... 75 1e-11
emb|AJ131817.1|SCO131817 Streptomyces coelicolor wdpA gene 75 1e-11
dbj|AP003592.1|AP003592 Nostoc sp. PCC 7120 DNA, complete g... 75 1e-11
emb|AL357152.1|SCH18 Streptomyces coelicolor cosmid H18 75 1e-11
ref|NM_101904.1| Arabidopsis thaliana chromosome 1 CHR1v12... 75 1e-11
gb|AY070530.1| Drosophila melanogaster GM13767 full length ... 75 1e-11
gb|AF394913.1|AF394913 Rosa hybrid cultivar photoregulatory... 75 1e-11
ref|NM_018096.1| Homo sapiens hypothetical protein similar ... 75 1e-11
dbj|AK001320.1|AK001320 Homo sapiens cDNA FLJ10458 fis, clo... 75 1e-11
gb|BC012075.1|BC012075 Homo sapiens, hypothetical protein s... 75 1e-11
ref|XM_079159.1| CG3436, mRNA 75 1e-11
ref|NM_119703.1| Arabidopsis thaliana chromosome 4 CHR4v12... 75 1e-11
dbj|AP003590.1|AP003590 Nostoc sp. PCC 7120 DNA, complete g... 75 1e-11
gb|BC002884.1|BC002884 Homo sapiens, hypothetical protein s... 75 1e-11
gb|AF151110.1|AF151110 Mus musculus COP1 protein (Cop1) mRN... 75 2e-11
dbj|AB042102.1|AB042102 Oryza sativa SEC31 mRNA, complete cds 75 2e-11
ref|XM_092154.1| Homo sapiens similar to F-box protein FBW7... 75 2e-11
dbj|AK011064.1|AK011064 Mus musculus 13 days embryo liver c... 75 2e-11
ref|XM_040554.4| Homo sapiens similar to similar to constit... 75 2e-11
dbj|AK001278.1|AK001278 Homo sapiens cDNA FLJ10416 fis, clo... 75 2e-11
ref|NM_022457.3| Homo sapiens similar to constitutive photo... 75 2e-11
dbj|AK025789.1|AK025789 Homo sapiens cDNA: FLJ22136 fis, cl... 75 2e-11
ref|XM_059513.2| Homo sapiens similar to constitutive photo... 75 2e-11
dbj|AP003582.1|AP003582 Nostoc sp. PCC 7120 DNA, complete g... 74 2e-11
gb|AC005762.1|AC005762 Drosophila melanogaster DNA sequence... 74 3e-11
gb|BC018399.1|BC018399 Mus musculus, hypothetical protein s... 74 3e-11
ref|NG_000668.1| Drosophila melanogaster ebi (ebi) on chrom... 74 3e-11
ref|NG_000510.1| Drosophila melanogaster alpha-Adaptin (alp... 74 3e-11
gb|AE003589.2|AE003589 Drosophila melanogaster genomic scaf... 74 3e-11
gb|AY071661.1| Drosophila melanogaster RE74715 full length ... 74 3e-11
ref|NM_057981.1| Drosophila melanogaster ebi (ebi), transcr... 74 3e-11
gb|AF146345.1|AF146345 Drosophila melanogaster Ebi mRNA, co... 74 3e-11
ref|NG_000079.1| Drosophila melanogaster Ribosomal protein ... 74 3e-11
ref|NM_057921.1| Drosophila melanogaster Receptor of activa... 74 3e-11
emb|X61480.1|DDCORONIN D.discoideum mRNA for coronin 74 3e-11
dbj|AP003597.1|AP003597 Nostoc sp. PCC 7120 DNA, complete g... 74 3e-11
dbj|AB025246.1|AB025246 Xenopus laevis mRNA for coronin hom... 74 4e-11
emb|AJ271374.1|TVA271374 Trichomonas vaginalis cor1 gene fo... 72 8e-11
dbj|AB070895.1|AB070895 Mus musculus mRNA for clipin E/coro... 72 8e-11
ref|NM_118006.1| Arabidopsis thaliana chromosome 4 CHR4v12... 72 8e-11
ref|NM_030732.1| Mus musculus IRA1 protein (IRA1), mRNA 72 1e-10
gb|AF268195.1|AF268195 Mus musculus strain BALB/c IRA1 mRNA... 72 1e-10
dbj|AB026648.1|AB026648 Arabidopsis thaliana genomic DNA, c... 72 1e-10
gb|AF140359.1|AF140359 Rattus norvegicus coronin relative p... 72 1e-10
emb|X98130.1|AT81KBGEN A.thaliana 81kb genomic sequence 72 1e-10
emb|X97488.1|ATORF10 A.thaliana mRNA for unknown protein, O... 72 1e-10
ref|NM_113575.1| Arabidopsis thaliana chromosome 3 CHR3v12... 72 1e-10
ref|XM_051882.1| Homo sapiens WD40 protein Ciao1 (CIAO1), mRNA 72 1e-10
ref|XM_010869.5| Homo sapiens similar to WD40 protein Ciao1... 72 1e-10
gb|BC001395.1|BC001395 Homo sapiens, WD40 protein Ciao1, cl... 72 1e-10
ref|NM_004804.1| Homo sapiens WD40 protein Ciao1 (CIAO1), mRNA 72 1e-10
gb|U63810.1|HSU63810 Homo sapiens WD40 protein Ciao 1 mRNA,... 72 1e-10
gb|AF323585.1|AF323585 Podospora anserina beta transducin-l... 72 1e-10
dbj|AK002371.1|AK002371 Mus musculus adult male kidney cDNA... 71 2e-10
ref|NM_004814.1| Homo sapiens U5 snRNP-specific 40 kDa prot... 71 2e-10
gb|AF090988.1|AF090988 Homo sapiens U5 snRNP-specific 40 kD... 71 2e-10
gb|AF268193.1|AF268193 Homo sapiens IRA1 mRNA, complete cds... 71 2e-10
gb|AF314544.1|AF314544 Homo sapiens nuclear receptor co-rep... 71 2e-10
dbj|AB070894.1|AB070894 Mus musculus mRNA for clipin E/coro... 71 2e-10
ref|NM_030581.1| Homo sapiens hypothetical protein FLJ12270... 71 2e-10
gb|BC004519.1|BC004519 Homo sapiens, clone MGC:11230 IMAGE:... 71 2e-10
ref|NM_024665.1| Homo sapiens nuclear receptor co-repressor... 71 2e-10
dbj|AK022956.1|AK022956 Homo sapiens cDNA FLJ12894 fis, clo... 71 2e-10
gb|AF069737.1|AF069737 Xenopus laevis notchless (nle) mRNA,... 71 2e-10
ref|XM_096175.1| Homo sapiens nuclear receptor co-repressor... 71 2e-10
gb|L37885.2|YSPGNRP Schizosaccharomyces pombe guanine nucle... 71 2e-10
ref|NM_003310.1| Homo sapiens tumor suppressing subtransfer... 71 2e-10
gb|AF019952.1|AF019952 Homo sapiens tumor suppressing STF c... 71 2e-10
gb|AE003828.2|AE003828 Drosophila melanogaster genomic scaf... 71 2e-10
gb|AC005334.1|AC005334 Drosophila melanogaster DNA sequence... 71 2e-10
gb|AC005437.1|AC005437 Drosophila melanogaster DNA sequence... 71 2e-10
gb|BC002485.1|BC002485 Homo sapiens, tumor suppressing subt... 71 2e-10
dbj|AB070896.1|AB070896 Mus musculus mRNA for clipin E/coro... 71 2e-10
dbj|AK026522.1|AK026522 Homo sapiens cDNA: FLJ22869 fis, cl... 71 2e-10
ref|NM_057609.1| Drosophila melanogaster TBP-associated fac... 71 2e-10
ref|NG_000355.1| Drosophila melanogaster TBP-associated fac... 71 2e-10
gb|AY051960.1| Drosophila melanogaster LD42828 full length ... 71 2e-10
gb|AY050883.1| Arabidopsis thaliana unknown protein (AT4g18... 71 2e-10
gb|AE003590.2|AE003590 Drosophila melanogaster genomic scaf... 71 2e-10
gb|AY056430.1| Arabidopsis thaliana AT4g18900/F13C5_70 mRNA... 71 2e-10
ref|NM_118007.1| Arabidopsis thaliana chromosome 4 CHR4v12... 71 2e-10
gb|AC008318.7|AC008318 Drosophila melanogaster, chromosome ... 71 2e-10
gb|U06460.1|DMU06460 Drosophila melanogaster transcription ... 71 2e-10
gb|AC008260.5|AC008260 Drosophila melanogaster, chromosome ... 71 2e-10
gb|U96491.1|DMU96491 Drosophila melanogaster RACK1 (rack1) ... 71 2e-10
emb|AJ289773.1|PSA289773 Pisum sativum mRNA for COP1 regula... 70 3e-10
ref|NM_011779.1| Mus musculus coronin, actin binding protei... 70 3e-10
gb|AF143957.1|AF143957 Mus musculus coronin-3 mRNA, complet... 70 3e-10
dbj|AK000860.1|AK000860 Homo sapiens cDNA FLJ20853 fis, clo... 70 3e-10
ref|NM_025296.1| Mus musculus WD40 protein Ciao1 (Ciao1-pen... 70 3e-10
dbj|AK002314.1|AK002314 Mus musculus adult male kidney cDNA... 70 3e-10
emb|Y09579.1|PSCOP1PRT P.sativum mRNA for Cop1 protein 70 3e-10
emb|AJ289774.1|PSA289774 Pisum sativum mRNA for COP1 regula... 70 3e-10
ref|XM_010790.5| Homo sapiens tumor suppressing subtransfer... 70 3e-10
ref|NM_020441.1| Homo sapiens hypothetical protein DKFZp762... 70 3e-10
gb|BC006449.1|BC006449 Homo sapiens, Similar to coronin, ac... 70 3e-10
ref|XM_082025.1| CG1523, mRNA 70 4e-10
gb|AE003549.2|AE003549 Drosophila melanogaster genomic scaf... 70 4e-10
gb|AY051986.1| Drosophila melanogaster LD45447 full length ... 70 4e-10
gb|AC010156.5| Drosophila melanogaster 3L BAC RP98-27H3 (Ro... 70 4e-10
ref|NM_080088.1| Drosophila melanogaster cannonball (can), ... 70 4e-10
gb|AF346730.1|AF346730 Drosophila melanogaster cannonball m... 70 4e-10
gb|BC019444.1|BC019444 Mus musculus, coronin, actin binding... 70 4e-10
gb|BC004089.1|BC004089 Mus musculus, WD40 protein Ciao1, cl... 70 4e-10
gb|BC001652.1|BC001652 Homo sapiens, nuclear phosphoprotein... 70 5e-10
gb|AY061388.1| Drosophila melanogaster LD31217 full length ... 70 5e-10
ref|XM_001618.4| Homo sapiens U5 snRNP-specific 40 kDa prot... 70 5e-10
ref|NM_019222.1| Rattus norvegicus coronin, actin binding p... 70 5e-10
emb|AJ006064.1|RNO6064 Rattus norvegicus mRNA for coronin-l... 70 5e-10
gb|AE003813.2|AE003813 Drosophila melanogaster genomic scaf... 70 5e-10
gb|AC010578.5|AC010578 Drosophila melanogaster, chromosome ... 70 5e-10
gb|BC001494.1|BC001494 Homo sapiens, clone MGC:1910 IMAGE:3... 70 5e-10
ref|NG_000791.1| Drosophila melanogaster (Ercc1) on chromo... 70 5e-10
dbj|AB022686.1|AB022686 Lycopersicon esculentum mRNA for Le... 70 5e-10
gb|AY061326.1| Drosophila melanogaster LD24373 full length ... 69 7e-10
ref|NM_011778.1| Mus musculus coronin, actin binding protei... 69 7e-10
gb|AF143956.1|AF143956 Mus musculus coronin-2 mRNA, complet... 69 7e-10
emb|AL078635.1|CZA382 Amycolatopsis orientalis cosmid pCZA382 69 7e-10
gb|AF323584.1|AF323584 Podospora anserina beta transducin-l... 69 7e-10
gb|AF323583.1|AF323583 Podospora anserina beta transducin-l... 69 7e-10
gb|AF323582.1|AF323582 Podospora anserina beta transducin-l... 69 7e-10
dbj|AK007246.1|AK007246 Mus musculus adult male testis cDNA... 69 7e-10
ref|NM_014325.1| Homo sapiens coronin, actin binding protei... 69 9e-10
dbj|AB030656.1|AB030656 Homo sapiens mRNA for hCRNN4, compl... 69 9e-10
ref|XM_048046.1| Homo sapiens katanin p80 (WD40-containing)... 69 9e-10
dbj|AP003600.1|AP003600 Nostoc sp. PCC 7120 plasmid pCC7120... 69 9e-10
dbj|AK010364.1|AK010364 Mus musculus ES cells cDNA, RIKEN f... 69 9e-10
dbj|AK023205.1|AK023205 Homo sapiens cDNA FLJ13143 fis, clo... 69 9e-10
ref|XM_083885.1| Homo sapiens coronin, actin binding protei... 69 9e-10
dbj|AK014865.1|AK014865 Mus musculus adult male testis cDNA... 69 9e-10
gb|BC002342.1|BC002342 Homo sapiens, coronin, actin-binding... 69 9e-10
emb|AL162070.1|HSM802601 Homo sapiens mRNA; cDNA DKFZp762H1... 69 9e-10
dbj|AK016618.1|AK016618 Mus musculus adult male testis cDNA... 69 9e-10
gb|M24193.1|CHKMHB123A Chicken MHC B complex protein (C12-3... 69 9e-10
gb|BC001353.1|BC001353 Homo sapiens, katanin p80 (WD40-cont... 69 9e-10
gb|M96642.1|PARRSP126A Paramecium tetraurelia P126 repetiti... 69 1e-09
dbj|AB023142.1|AB023142 Homo sapiens mRNA for KIAA0925 prot... 68 2e-09
ref|NM_007062.1| Homo sapiens nuclear phosphoprotein simila... 68 2e-09
gb|L07758.1|HUM56KDAPR Human IEF SSP 9502 mRNA, complete cds 68 2e-09
gb|BC012827.1|BC012827 Homo sapiens, CDC20 (cell division c... 68 2e-09
gb|BC001088.1|BC001088 Homo sapiens, CDC20 (cell division c... 68 2e-09
gb|BC013303.1|BC013303 Homo sapiens, CDC20 (cell division c... 68 2e-09
gb|BC012803.1|BC012803 Homo sapiens, CDC20 (cell division c... 68 2e-09
gb|BC006272.1|BC006272 Homo sapiens, CDC20 (cell division c... 68 2e-09
ref|XM_046373.3| Homo sapiens CDC20 cell division cycle 20 ... 68 2e-09
ref|NM_001255.1| Homo sapiens CDC20 cell division cycle 20 ... 68 2e-09
gb|U05340.1|HSU05340 Human p55CDC mRNA, complete cds 68 2e-09
ref|NM_116211.1| Arabidopsis thaliana chromosome 3 CHR3v12... 68 2e-09
dbj|D44496.1|BOVP57A Bovine p57 mRNA for actin binding prot... 68 2e-09
gb|BC010044.1|BC010044 Homo sapiens, CDC20 (cell division c... 68 2e-09
emb|AL590442.1|CNS07EG9 chromosome II of strain GB-M1 of En... 68 2e-09
emb|X59720.2|SCCHRIII S.cerevisiae chromosome III complete ... 68 2e-09
gb|BC000624.1|BC000624 Homo sapiens, CDC20 (cell division c... 68 2e-09
ref|XM_035403.3| Homo sapiens coronin, actin binding protei... 68 2e-09
gb|BC015998.1|BC015998 Homo sapiens, CDC20 (cell division c... 68 2e-09
gb|AF099644.1|AF099644 Homo sapiens cell cycle protein CDC2... 68 2e-09
ref|NM_100988.1| Arabidopsis thaliana chromosome 1 CHR1v12... 68 2e-09
gb|BC009426.1|BC009426 Homo sapiens, CDC20 (cell division c... 68 2e-09
gb|BC009425.1|BC009425 Homo sapiens, CDC20 (cell division c... 68 2e-09
gb|AF021797.1|AF021797 Pichia pastoris peroxisomal receptor... 68 2e-09
ref|NM_124660.1| Arabidopsis thaliana chromosome 5 CHR5v12... 68 2e-09
gb|AF083383.1|AF083383 Homo sapiens 38kDa splicing factor m... 68 2e-09
gb|AF261992.1|AF261992 Oryza sativa subsp. indica COP1 mRNA... 68 2e-09
ref|NM_023979.1| Rattus norvegicus apoptotic protease activ... 68 2e-09
gb|AF320222.1|AF320222 Rattus norvegicus APAF1 (Apaf1) mRNA... 68 2e-09
dbj|AB040053.1|AB040053 Oryza sativa subsp. japonica rCOP1 ... 68 2e-09
ref|NM_104802.1| Arabidopsis thaliana chromosome 1 CHR1v12... 68 2e-09
gb|AC002333.2|AC002333 Arabidopsis thaliana chromosome II s... 67 3e-09
ref|NM_009684.1| Mus musculus apoptotic protease activating... 67 3e-09
gb|AF105259.1|AF105259 Xenopus laevis activated protein kin... 67 3e-09
gb|AF064071.1|AF064071 Mus musculus apoptotic protease acti... 67 3e-09
emb|X97800.1|HVRACK1 H.vulgaris mRNA for put. activated pro... 67 3e-09
ref|NM_129939.1| Arabidopsis thaliana chromosome 2 CHR2v12... 67 3e-09
ref|NM_059254.1| Caenorhabditis elegans 67 3e-09
emb|AL031907.1|SPCC18 S.pombe chromosome III cosmid c18 67 4e-09
dbj|D17526.1|TOBARCA Tobacco mRNA for G protein beta subuni... 67 4e-09
ref|XM_079245.1| CG4705, mRNA 67 4e-09
dbj|AK016991.1|AK016991 Mus musculus adult male testis cDNA... 67 4e-09
gb|AF218388.1|AF218388 Rattus norvegicus apoptotic protease... 67 4e-09
dbj|D63999.1|SYCSLRA Synechocystis sp. PCC 6803 DNA, comple... 67 5e-09
gb|BC023137.1| Mus musculus, RIKEN cDNA 2310058A11 gene, cl... 67 5e-09
dbj|AB010098.1|AB010098 Homo sapiens mRNA for ClipinC, comp... 67 5e-09
dbj|AK009972.1|AK009972 Mus musculus adult male tongue cDNA... 67 5e-09
emb|AJ271728.1|ATH271728 Arabidopsis thaliana oasB gene for... 67 5e-09
gb|BC003199.1|BC003199 Mus musculus, RIKEN cDNA 2310058A11 ... 67 5e-09
ref|NM_101162.1| Arabidopsis thaliana chromosome 1 CHR1v12... 67 5e-09
gb|AC012187.3|F13K23 Sequence of BAC F13K23 from Arabidopsi... 67 5e-09
ref|NM_000082.1| Homo sapiens Cockayne syndrome 1 (classica... 66 6e-09
gb|U28413.1|HSU28413 Human Cockayne syndrome complementatio... 66 6e-09
ref|NM_019069.1| Homo sapiens WD repeat domain 5B (WDR5B), ... 66 6e-09
dbj|AK002149.1|AK002149 Homo sapiens cDNA FLJ11287 fis, clo... 66 6e-09
gb|AF381614.1|AF381614 Magnaporthe grisea clone BAC 14F6 ge... 66 6e-09
emb|AJ222709.1|DME222709 Drosophila melanogaster mRNA for H... 66 6e-09
ref|NM_119611.1| Arabidopsis thaliana chromosome 4 CHR4v12... 66 6e-09
gb|U12232.1|ATU12232 Arabidopsis thaliana Columbia GTP bind... 66 6e-09
gb|AY045860.1| Arabidopsis thaliana putative GTP binding pr... 66 6e-09
gb|AE003630.1|AE003630 Drosophila melanogaster genomic scaf... 51 6e-09
gb|AC007147.8|AC007147 Drosophila melanogaster, chromosome ... 51 6e-09
ref|NG_000500.1| Drosophila melanogaster Ubiquitin conjugat... 51 7e-09
ref|XM_038303.3| Homo sapiens similar to DKFZP434C245 prote... 66 8e-09
gb|BC018512.1|BC018512 Mus musculus, Similar to IRA1 protei... 66 8e-09
dbj|AK056931.1|AK056931 Homo sapiens cDNA FLJ32369 fis, clo... 66 8e-09
dbj|AK016201.1|AK016201 Mus musculus adult male testis cDNA... 66 8e-09
gb|AF056312.1|AF056312 Oryctolagus cuniculus coronin-like p... 66 8e-09
ref|NM_130411.1| Rattus norvegicus coronin, actin binding p... 66 8e-09
gb|AF416730.1|AF416730 Rattus norvegicus CORO1A protein mRN... 66 8e-09
ref|NM_119407.1| Arabidopsis thaliana chromosome 4 CHR4v12... 66 8e-09
gb|AF277458.1|AF277458 Arabidopsis thaliana LEUNIG (LEUNIG)... 66 8e-09
emb|Z36067.1|SCYBR198C S.cerevisiae chromosome II reading f... 66 8e-09
dbj|AK010576.1|AK010576 Mus musculus ES cells cDNA, RIKEN f... 65 1e-08
dbj|AB022687.1|AB022687 Lycopersicon esculentum mRNA for Le... 65 1e-08
ref|XM_078946.1| beta'-coatomer protein, mRNA 65 1e-08
ref|NM_080097.1| Drosophila melanogaster beta'-coatomer pro... 65 1e-08
emb|AJ006523.1|DME6523 Drosophila melanogaster mRNA for the... 65 1e-08
emb|AJ004807.1|NTAJ4807 Nicotiana tabacum xanthi arcA 3 gen... 65 1e-08
emb|AJ427222.1|MMU427222 Mus musculus mRNA for cockayne syn... 65 1e-08
gb|U27537.1|DDU27537 Dictyostelium discoideum G beta like p... 65 1e-08
gb|AF250049.1|AF250049 Zea mays WD-repeat protein RBAP3 (rb... 65 1e-08
emb|Z73603.1|SCYPL247C S.cerevisiae chromosome XVI reading ... 65 1e-08
dbj|D89247.1|D89247 Schizosaccharomyces pombe mRNA, partial... 65 1e-08
gb|AF143955.1|AF143955 Mus musculus coronin-1 mRNA, complet... 65 1e-08
gb|AE003441.1|AE003441 Drosophila melanogaster genomic scaf... 65 1e-08
gb|AF336287.1|AF336287 Gossypium hirsutum WD1521 (wd1522) m... 65 1e-08
gb|AY069414.1| Drosophila melanogaster LD11036 full length ... 65 1e-08
dbj|AK004277.1|AK004277 Mus musculus 18 days embryo whole b... 65 1e-08
ref|NM_106648.1| Arabidopsis thaliana chromosome 1 CHR1v12... 65 1e-08
ref|NM_009898.1| Mus musculus coronin, actin binding protei... 65 1e-08
gb|AF047388.1|AF047388 Mus musculus tryptophane aspartate c... 65 1e-08
emb|Z67751.1|SC38KCXVI S.cerevisiae DNA (chromosome XVI; 38... 65 1e-08
gb|BC002136.1|BC002136 Mus musculus, Similar to coronin, ac... 65 1e-08
ref|NM_052821.1| Homo sapiens WD repeat domain 5 (WDR5), tr... 65 2e-08
ref|NM_017588.1| Homo sapiens WD repeat domain 5 (WDR5), tr... 65 2e-08
emb|AJ011376.1|HSA011376 Homo sapiens mRNA for hypothetical... 65 2e-08
ref|NM_061344.1| Caenorhabditis elegans 65 2e-08
dbj|AK000552.1|AK000552 Homo sapiens cDNA FLJ20545 fis, clo... 65 2e-08
gb|AF363974.1|AF363974 Leishmania donovani strain MHOM/SD/0... 65 2e-08
gb|U27569.1|LCU27569 Leishmania chagasi activated protein k... 65 2e-08
ref|NM_080848.1| Mus musculus Bmp2-induced gene (Big-pendin... 65 2e-08
gb|AF416510.1|AF416510 Mus musculus WD repeat protein BIG-3... 65 2e-08
gb|BC019362.1|BC019362 Homo sapiens, guanine nucleotide bin... 65 2e-08
gb|BC016103.1|BC016103 Mus musculus, Similar to hypothetica... 65 2e-08
gb|BC010119.1|BC010119 Homo sapiens, guanine nucleotide bin... 65 2e-08
gb|BC000366.1|BC000366 Homo sapiens, guanine nucleotide bin... 65 2e-08
dbj|AB004537.1|AB004537 Schizosaccharomyces pombe 37 kb gen... 65 2e-08
gb|U49695.1|LIU49695 Leishmania infantum activated protein ... 65 2e-08
emb|AL022072.1|SPBC8D2 S.pombe chromosome II cosmid c8D2 65 2e-08
gb|BC001635.1|BC001635 Homo sapiens, Similar to hypothetica... 65 2e-08
gb|BC000672.1|BC000672 Homo sapiens, guanine nucleotide bin... 65 2e-08
gb|U94746.1|ATU94746 Arabidopsis thaliana WD repeat protein... 65 2e-08
emb|Y09514.1|NPY09514 N.plumbaginifolia mRNA for G protein ... 65 2e-08
gb|BC019093.1|BC019093 Homo sapiens, guanine nucleotide bin... 65 2e-08
ref|NM_058924.1| beta transducin 65 2e-08
gb|BC014256.1|BC014256 Homo sapiens, Similar to guanine nuc... 65 2e-08
gb|BC000214.1|BC000214 Homo sapiens, guanine nucleotide bin... 65 2e-08
ref|XM_057125.1| Homo sapiens similar to guanine nucleotide... 65 2e-08
ref|XM_034958.1| Homo sapiens similar to guanine nucleotide... 65 2e-08
dbj|AK025810.1|AK025810 Homo sapiens cDNA: FLJ22157 fis, cl... 65 2e-08
gb|BC021993.1|BC021993 Homo sapiens, guanine nucleotide bin... 65 2e-08
ref|XM_098427.1| Homo sapiens guanine nucleotide binding pr... 65 2e-08
gb|AF034793.1| Leishmania donovani activated protein kinase... 65 2e-08
gb|AF052433.1|AF052433 Strongylocentrotus purpuratus katani... 65 2e-08
ref|NM_126132.1| Arabidopsis thaliana chromosome 5 CHR5v12... 65 2e-08
gb|AY057698.1| Arabidopsis thaliana AT5g67320/K8K14_4 mRNA,... 65 2e-08
gb|AC007892.4|AC007892 Drosophila melanogaster, chromosome ... 64 2e-08
gb|AE003771.2|AE003771 Drosophila melanogaster genomic scaf... 64 2e-08
gb|AF132181.1|AF132181 Drosophila melanogaster clone LD2172... 64 2e-08
emb|Z48179.1|SC9302X S.cerevisiae chromosome IV cosmid 9302 64 2e-08
gb|U20939.1|YSCL9576 Saccharomyces cerevisiae chromosome XI... 64 2e-08
ref|XM_081893.1| BcDNA:LD21720, mRNA 64 2e-08
dbj|D29802.1|MUSGPBSL Mouse mRNA for G protein beta subunit... 64 2e-08
ref|NM_112695.1| Arabidopsis thaliana chromosome 3 CHR3v12... 64 2e-08
gb|AY050338.1| Arabidopsis thaliana AT3g18130/MRC8_11 mRNA,... 64 2e-08
gb|AF125255.1|AF125255 Leishmania panamensis activated prot... 64 2e-08
gb|AF125254.1|AF125254 Leishmania panamensis activated prot... 64 2e-08
emb|Z33643.1|BNGNRPR B.napus (Naehan) bgb1 mRNA for guanine... 64 2e-08
gb|AF063022.1|AF063022 Crithidia fasciculata CACK protein (... 64 3e-08
gb|U77381.1|ATU77381 Arabidopsis thaliana WD-40 repeat prot... 64 3e-08
gb|AC104609.9| Drosophila melanogaster X BAC RP98-39F18 (Ro... 64 3e-08
gb|AE003767.1|AE003767 Drosophila melanogaster genomic scaf... 64 3e-08
ref|NM_021765.1| Rattus norvegicus beta prime COP (Copb), mRNA 64 3e-08
gb|AE003443.1|AE003443 Drosophila melanogaster genomic scaf... 64 3e-08
gb|AF002705.1|AF002705 Rattus norvegicus beta prime COP mRN... 64 3e-08
gb|AF357839.1|AF357839 Leishmania donovani LACK protective ... 64 3e-08
emb|Z72388.1|NPGPROTB N.plumbaginifolia mRNA for G protein ... 64 3e-08
emb|Y08678.1|MSGB1 M.sativa mRNA for G protein beta subunit... 64 3e-08
ref|NM_008143.1| Mus musculus guanine nucleotide binding pr... 64 3e-08
emb|X75313.1|MMRNAGM M.musculus (C57BL/6) GB-like mRNA 64 3e-08
gb|BC014788.1|BC014788 Homo sapiens, guanine nucleotide bin... 64 3e-08
emb|Z33879.1|SSGBETA S.scrofa mRNA encoding G-beta like pro... 64 3e-08
ref|NM_130734.1| Rattus norvegicus guanine nucleotide bindi... 64 3e-08
gb|BC020322.1|BC020322 Mus musculus, clone IMAGE:4458340, mRNA 64 3e-08
dbj|AK002493.1|AK002493 Mus musculus adult male kidney cDNA... 64 3e-08
gb|U03390.1|RNU03390 Rattus norvegicus Sprague Dawley prote... 64 3e-08
gb|AC006170.11|AC006170 Drosophila melanogaster, chromosome... 64 3e-08
dbj|AP003583.1|AP003583 Nostoc sp. PCC 7120 DNA, complete g... 64 3e-08
gb|AF332222.1|AF332222 Homo sapiens transducin beta-like 1 ... 64 3e-08
gb|M24194.1|HUMMHBA123 Human MHC protein homologous to chic... 64 3e-08
ref|NM_077485.1| WD domain, G-beta repeat (6 domains) 64 3e-08
gb|AF332221.1|AF332221 Homo sapiens transducin beta-like 1 ... 64 3e-08
ref|NM_033284.1| Homo sapiens transducin beta-like 1 protei... 64 3e-08
gb|AF332220.1|AF332220 Homo sapiens transducin beta-like 1 ... 64 3e-08
ref|NM_006098.1| Homo sapiens guanine nucleotide binding pr... 64 3e-08
gb|BC017287.1|BC017287 Homo sapiens, guanine nucleotide bin... 64 3e-08
emb|AJ132860.1|BTA132860 Bos taurus mRNA for receptor for a... 64 3e-08
dbj|AK017772.1|AK017772 Mus musculus 8 days embryo whole bo... 64 3e-08
ref|NM_101670.1| Arabidopsis thaliana chromosome 1 CHR1v12... 64 4e-08
gb|AY063016.1| Arabidopsis thaliana putative guanine nucleo... 64 4e-08
gb|AC069551.4|AC069551 Genomic sequence for Arabidopsis tha... 64 4e-08
gb|AY035007.1| Arabidopsis thaliana putative guanine nucleo... 64 4e-08
dbj|AB020749.1|AB020749 Arabidopsis thaliana genomic DNA, c... 64 4e-08
gb|AF116463.2|AF116463 Streptomyces lincolnensis putative o... 64 4e-08
gb|AF368031.1|AF368031 Heliothis virescens receptor for act... 64 4e-08
gb|U27568.1|LMU27568 Leishmania major activated protein kin... 64 4e-08
ref|NM_104114.1| Arabidopsis thaliana chromosome 1 CHR1v12... 64 4e-08
gb|AC034107.5|T10F20 Sequence of BAC T10F20 from Arabidopsi... 64 4e-08
dbj|D90915.1|D90915 Synechocystis sp. PCC 6803 DNA, complet... 63 5e-08
ref|NM_058153.1| Drosophila melanogaster fizzy (fzy), trans... 63 5e-08
dbj|AB005589.1|AB005589 Schizosaccharomyces pombe mRNA for ... 63 5e-08
gb|L28125.2|FLABTLP Podospora anserina beta transducin-like... 63 5e-08
ref|NM_052820.1| Homo sapiens coronin, actin binding protei... 63 5e-08
gb|BC011690.1|BC011690 Homo sapiens, clone MGC:19551 IMAGE:... 63 5e-08
gb|U57057.1|HSU57057 Human WD protein IR10 mRNA, complete cds 63 5e-08
ref|NM_078639.1| Drosophila melanogaster katanin 80 (katani... 63 5e-08
gb|AF223065.1|AF223065 Drosophila melanogaster putative mic... 63 5e-08
gb|AE003415.1|DROSADH09 Drosophila melanogaster, chromosome... 63 5e-08
gb|AF052575.1|AF052575 Spisula solidissima Cdc20 mRNA, comp... 63 5e-08
gb|U22419.1|DMU22419 Drosophila melanogaster fizzy (fzy) mR... 63 5e-08
dbj|AK014517.1|AK014517 Mus musculus 0 day neonate skin cDN... 63 5e-08
ref|NG_000341.1| Drosophila melanogaster cactus (cact) on c... 63 5e-08
dbj|AK009247.1|AK009247 Mus musculus adult male tongue cDNA... 63 5e-08
gb|AC092398.1|AC092398 Drosophila melanogaster, chromosome ... 63 5e-08
gb|AE003650.1|AE003650 Drosophila melanogaster genomic scaf... 63 5e-08
ref|NM_003389.2| Homo sapiens coronin, actin binding protei... 63 5e-08
emb|AL132675.1|SPAC144 S.pombe chromosome I cosmid c144 63 5e-08
gb|BC000010.1|BC000010 Homo sapiens, coronin, actin-binding... 63 5e-08
ref|NG_000449.1| Drosophila melanogaster cornichon (cni) on... 63 5e-08
ref|NG_000818.1| Drosophila melanogaster fizzy (fzy) on chr... 63 5e-08
emb|X81424.1|SCPAS7 S.cerevisiae PAS7 gene 63 7e-08
gb|AF025330.1|AF025330 Danio rerio receptor for activated p... 63 7e-08
emb|X83704.1|SCDNAPEB1 S.cerevisiae PEB1 gene 63 7e-08
emb|AJ002197.1|PFJ002197 Plasmodium falciparum coronin gene... 63 7e-08
dbj|AK012242.1|AK012242 Mus musculus 11 days embryo whole b... 63 7e-08
gb|BC009761.1|BC009761 Homo sapiens, clone IMAGE:3938571, m... 62 9e-08
gb|AF034804.1|AF034804 Leishmania major LACK gene, complete... 62 9e-08
ref|NM_005886.1| Homo sapiens katanin p80 (WD40-containing)... 62 9e-08
gb|AF052432.1|AF052432 Homo sapiens katanin p80 subunit mRN... 62 9e-08
gb|U12233.1|ZMU12233 Zea mays GTP binding protein beta subu... 56 6e-06
emb|X89737.1|OSGPROTBS O.sativa mRNA for g protein b subunit 56 6e-06
>ref|NM_009030.1| Mus musculus retinoblastoma binding protein 4 (Rbbp4), mRNA
Length = 1961
Score = 964 bits (2491), Expect = 0.0
Identities = 461/461 (100%), Positives = 461/461 (100%)
Frame = +3
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
Sbjct: 108 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 287
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
Sbjct: 288 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 467
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 468 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 647
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE
Sbjct: 648 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 827
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 828 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1007
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
Sbjct: 1008WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1187
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 420
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
Sbjct: 1188DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 1367
Query: 421 EGQGSRRVCTCDPRLSLFSSEPRDGFNIGLRHRLCSATQLQ 461
EGQGSRRVCTCDPRLSLFSSEPRDGFNIGLRHRLCSATQLQ
Sbjct: 1368EGQGSRRVCTCDPRLSLFSSEPRDGFNIGLRHRLCSATQLQ 1490
>gb|U35141.1|MMU35141 Mus musculus retinoblastoma-binding protein (mRbAp48) mRNA,
complete cds
Length = 1961
Score = 964 bits (2491), Expect = 0.0
Identities = 461/461 (100%), Positives = 461/461 (100%)
Frame = +3
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
Sbjct: 108 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 287
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
Sbjct: 288 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 467
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 468 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 647
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE
Sbjct: 648 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 827
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 828 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1007
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
Sbjct: 1008WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1187
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 420
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
Sbjct: 1188DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 1367
Query: 421 EGQGSRRVCTCDPRLSLFSSEPRDGFNIGLRHRLCSATQLQ 461
EGQGSRRVCTCDPRLSLFSSEPRDGFNIGLRHRLCSATQLQ
Sbjct: 1368EGQGSRRVCTCDPRLSLFSSEPRDGFNIGLRHRLCSATQLQ 1490
>gb|BC003092.1|BC003092 Homo sapiens, Similar to retinoblastoma binding protein 4, clone
MGC:1393 IMAGE:3356558, mRNA, complete cds
Length = 2174
Score = 890 bits (2300), Expect = 0.0
Identities = 434/453 (95%), Positives = 437/453 (95%), Gaps = 4/453 (0%)
Frame = +3
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
Sbjct: 87 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 266
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
Sbjct: 267 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 446
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 447 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 626
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWNPNLSGHLLSASDDHTICLWDISAVPK+GKVVDAKTIFTGHTAVVEDVSWHLLHE
Sbjct: 627 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 806
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 807 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 986
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
Sbjct: 987 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1166
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 420
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
Sbjct: 1167DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 1346
Query: 421 EGQGSRRVCTCDPRL----SLFSSEPRDGFNIG 449
EGQGS C L LFSS+P + FN G
Sbjct: 1347EGQGS---*ICLYLL*F*TPLFSSQP*E*FNTG 1436
>ref|NM_005610.1| Homo sapiens retinoblastoma binding protein 4 (RBBP4), mRNA
Length = 2314
Score = 890 bits (2300), Expect = 0.0
Identities = 434/453 (95%), Positives = 437/453 (95%), Gaps = 4/453 (0%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
Sbjct: 85 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 264
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
Sbjct: 265 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 444
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 445 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 624
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWNPNLSGHLLSASDDHTICLWDISAVPK+GKVVDAKTIFTGHTAVVEDVSWHLLHE
Sbjct: 625 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 804
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 805 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 984
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
Sbjct: 985 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1164
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 420
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
Sbjct: 1165DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 1344
Query: 421 EGQGSRRVCTCDPRL----SLFSSEPRDGFNIG 449
EGQGS C L LFSS+P + FN G
Sbjct: 1345EGQGS---*ICLYLL*F*TPLFSSQP*E*FNTG 1434
>emb|X74262.1|HSRBAP48 H.sapiens RbAp48 mRNA encoding retinoblastoma binding protein
Length = 2314
Score = 890 bits (2300), Expect = 0.0
Identities = 434/453 (95%), Positives = 437/453 (95%), Gaps = 4/453 (0%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
Sbjct: 85 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 264
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
Sbjct: 265 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 444
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 445 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 624
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWNPNLSGHLLSASDDHTICLWDISAVPK+GKVVDAKTIFTGHTAVVEDVSWHLLHE
Sbjct: 625 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 804
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 805 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 984
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
Sbjct: 985 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1164
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 420
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
Sbjct: 1165DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 1344
Query: 421 EGQGSRRVCTCDPRL----SLFSSEPRDGFNIG 449
EGQGS C L LFSS+P + FN G
Sbjct: 1345EGQGS---*ICLYLL*F*TPLFSSQP*E*FNTG 1434
>ref|XM_018112.5| Homo sapiens retinoblastoma binding protein 4 (RBBP4), mRNA
Length = 2361
Score = 890 bits (2300), Expect = 0.0
Identities = 434/453 (95%), Positives = 437/453 (95%), Gaps = 4/453 (0%)
Frame = +2
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
Sbjct: 137 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 316
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
Sbjct: 317 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 496
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 497 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 676
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWNPNLSGHLLSASDDHTICLWDISAVPK+GKVVDAKTIFTGHTAVVEDVSWHLLHE
Sbjct: 677 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 856
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 857 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1036
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
Sbjct: 1037WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1216
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 420
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
Sbjct: 1217DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 1396
Query: 421 EGQGSRRVCTCDPRL----SLFSSEPRDGFNIG 449
EGQGS C L LFSS+P + FN G
Sbjct: 1397EGQGS---*ICLYLL*F*TPLFSSQP*E*FNTG 1486
>gb|AF097750.1|AF097750 Gallus gallus chromatin assembly factor 1 p48 subunit mRNA,
complete cds
Length = 2400
Score = 884 bits (2284), Expect = 0.0
Identities = 423/425 (99%), Positives = 424/425 (99%)
Frame = +2
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
Sbjct: 80 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 259
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
Sbjct: 260 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 439
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 440 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 619
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWNPNLSGHLLSASDDHTICLWDISAVPK+GKVVDAKTIFTGHTAVVEDVSWHLLHE
Sbjct: 620 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 799
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 800 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 979
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
Sbjct: 980 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1159
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 420
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI NDEDPEGSVDP
Sbjct: 1160DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENINNDEDPEGSVDP 1339
Query: 421 EGQGS 425
EGQGS
Sbjct: 1340EGQGS 1354
>gb|AF073787.1|AF073787 Xenopus laevis retinoblastoma A associated protein mRNA, complete
cds
Length = 1972
Score = 870 bits (2248), Expect = 0.0
Identities = 422/459 (91%), Positives = 432/459 (93%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWL DVTRP+GKD
Sbjct: 331 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLSDVTRPDGKD 510
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
Sbjct: 511 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 690
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
I H+GEVNRARYMPQNPCIIATKTP+SDVLVFDYTKHPSKPDPSGECNP+LRLRGHQKEG
Sbjct: 691 ITHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPNLRLRGHQKEG 870
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWNPNLSG+LLSASDDHTICLWDISAVPK+GKVVDAKTIFTGHTAVVEDVSWHLLHE
Sbjct: 871 YGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 1050
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 1051SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1230
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
Sbjct: 1231WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1410
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 420
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED EG VDP
Sbjct: 1411DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDTEGGVDP 1590
Query: 421 EGQGSRRVCTCDPRLSLFSSEPRDGFNIGLRHRLCSATQ 459
EGQGS C + + + LRHR +A Q
Sbjct: 1591EGQGS*TKIYCS--VCFLQKQRLCLLHPALRHRPFNAAQ 1701
>emb|X71810.1|HSIEF9306 H.sapiens IEF 9306 mRNA
Length = 1417
Score = 843 bits (2179), Expect = 0.0
Identities = 403/404 (99%), Positives = 404/404 (99%)
Frame = +2
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
Sbjct: 74 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 253
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
Sbjct: 254 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 433
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 434 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 613
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWNPNLSGHLLSASDDHTICLWDISAVPK+GKVVDAKTIFTGHTAVVEDVSWHLLHE
Sbjct: 614 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE 793
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 794 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 973
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
Sbjct: 974 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 1153
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM
Sbjct: 1154DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 1285
Score = 60.8 bits (146), Expect = 3e-07
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 12/160 (7%)
Frame = +2
Query: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHSFESHKDE 319
H EVN + P + I+AT + V ++D N L+L H+ E
Sbjct: 440 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRG---HQKE 610
Query: 320 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
+ + W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D
Sbjct: 611 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVED 769
Query: 380 FSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419
SW+ + SV++D + +W N N P SVD
Sbjct: 770 VSWHLLHESLFGSVADDQKLMIWDTRSN--NTSKPSHSVD 883
Score = 42.0 bits (97), Expect = 0.12
Identities = 25/101 (24%), Positives = 50/101 (48%), Gaps = 4/101 (3%)
Frame = +2
Query: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDL 171
K+++ +H+ E+ + ++ P N I+A+ + V+D +K P+ + + P+L
Sbjct: 992 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 1171
Query: 172 RL--RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAV 210
GH + SWNPN + S S+D+ + +W + V
Sbjct: 1172 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMELV 1294
>ref|NM_079630.1| Drosophila melanogaster Chromatin assembly factor 1 subunit (Caf1),
mRNA
Length = 1849
Score = 807 bits (2085), Expect = 0.0
Identities = 375/409 (91%), Positives = 400/409 (97%)
Frame = +3
Query: 7 AFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRL 66
+FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT+ +GKD+S+HRL
Sbjct: 348 SFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRL 527
Query: 67 VLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGE 126
+LGTHTSDEQNHL+IASVQLP++DAQFD SHYD+EKGEFGGFGSV GKIEIEIKINHEGE
Sbjct: 528 ILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGE 707
Query: 127 VNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWN 186
VNRARYMPQN C+IATKTPSSDVLVFDYTKHPSKP+PSGEC PDLRLRGHQKEGYGLSWN
Sbjct: 708 VNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWN 887
Query: 187 PNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSV 246
PNL+G+LLSASDDHTICLWDI+A PK+ +V+DAK IFTGHTAVVEDV+WHLLHESLFGSV
Sbjct: 888 PNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV 1067
Query: 247 ADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
ADDQKLMIWDTR+NNTSKPSH+VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL
Sbjct: 1068ADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 1247
Query: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPEL
Sbjct: 1248KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 1427
Query: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPE 415
LFIHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQVWQMAEN+YNDE+PE
Sbjct: 1428LFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPE 1574
Score = 58.9 bits (141), Expect = 1e-06
Identities = 41/165 (24%), Positives = 70/165 (41%), Gaps = 10/165 (6%)
Frame = +3
Query: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRG---HQKE 179
H EVN + P + I+AT + V ++D N L+L H+ E
Sbjct: 1143 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHSFESHKDE 1286
Query: 180 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKT-------IFTGHTAVVED 232
+ + W+P+ L S+ D + +WD+S + ++ DA+ I GHTA + D
Sbjct: 1287 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 1466
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVN 277
SW+ + SV++D + +W N + + A E N
Sbjct: 1467 FSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETN 1601
>gb|AY061408.1| Drosophila melanogaster LD33761 full length cDNA
Length = 1849
Score = 807 bits (2085), Expect = 0.0
Identities = 375/409 (91%), Positives = 400/409 (97%)
Frame = +3
Query: 7 AFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRL 66
+FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT+ +GKD+S+HRL
Sbjct: 348 SFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRL 527
Query: 67 VLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGE 126
+LGTHTSDEQNHL+IASVQLP++DAQFD SHYD+EKGEFGGFGSV GKIEIEIKINHEGE
Sbjct: 528 ILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGE 707
Query: 127 VNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWN 186
VNRARYMPQN C+IATKTPSSDVLVFDYTKHPSKP+PSGEC PDLRLRGHQKEGYGLSWN
Sbjct: 708 VNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWN 887
Query: 187 PNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSV 246
PNL+G+LLSASDDHTICLWDI+A PK+ +V+DAK IFTGHTAVVEDV+WHLLHESLFGSV
Sbjct: 888 PNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV 1067
Query: 247 ADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
ADDQKLMIWDTR+NNTSKPSH+VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL
Sbjct: 1068ADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 1247
Query: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPEL
Sbjct: 1248KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 1427
Query: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPE 415
LFIHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQVWQMAEN+YNDE+PE
Sbjct: 1428LFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPE 1574
Score = 58.9 bits (141), Expect = 1e-06
Identities = 41/165 (24%), Positives = 70/165 (41%), Gaps = 10/165 (6%)
Frame = +3
Query: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRG---HQKE 179
H EVN + P + I+AT + V ++D N L+L H+ E
Sbjct: 1143 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHSFESHKDE 1286
Query: 180 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKT-------IFTGHTAVVED 232
+ + W+P+ L S+ D + +WD+S + ++ DA+ I GHTA + D
Sbjct: 1287 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 1466
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVN 277
SW+ + SV++D + +W N + + A E N
Sbjct: 1467 FSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETN 1601
>gb|U62388.1|DMU62388 Drosophila melanogaster chromatin assembly factor 1 p55 subunit
(p55) mRNA, complete cds
Length = 1807
Score = 807 bits (2085), Expect = 0.0
Identities = 375/409 (91%), Positives = 400/409 (97%)
Frame = +1
Query: 7 AFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRL 66
+FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT+ +GKD+S+HRL
Sbjct: 322 SFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRL 501
Query: 67 VLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGE 126
+LGTHTSDEQNHL+IASVQLP++DAQFD SHYD+EKGEFGGFGSV GKIEIEIKINHEGE
Sbjct: 502 ILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGE 681
Query: 127 VNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWN 186
VNRARYMPQN C+IATKTPSSDVLVFDYTKHPSKP+PSGEC PDLRLRGHQKEGYGLSWN
Sbjct: 682 VNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWN 861
Query: 187 PNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSV 246
PNL+G+LLSASDDHTICLWDI+A PK+ +V+DAK IFTGHTAVVEDV+WHLLHESLFGSV
Sbjct: 862 PNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV 1041
Query: 247 ADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
ADDQKLMIWDTR+NNTSKPSH+VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL
Sbjct: 1042ADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 1221
Query: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPEL
Sbjct: 1222KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 1401
Query: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPE 415
LFIHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQVWQMAEN+YNDE+PE
Sbjct: 1402LFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPE 1548
Score = 58.9 bits (141), Expect = 1e-06
Identities = 41/165 (24%), Positives = 70/165 (41%), Gaps = 10/165 (6%)
Frame = +1
Query: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRG---HQKE 179
H EVN + P + I+AT + V ++D N L+L H+ E
Sbjct: 1117 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHSFESHKDE 1260
Query: 180 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKT-------IFTGHTAVVED 232
+ + W+P+ L S+ D + +WD+S + ++ DA+ I GHTA + D
Sbjct: 1261 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 1440
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVN 277
SW+ + SV++D + +W N + + A E N
Sbjct: 1441 FSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETN 1575
>gb|AF279275.1|AF279275 Gallus gallus Rbap46 polypeptide mRNA, complete cds
Length = 1813
Score = 799 bits (2064), Expect = 0.0
Identities = 381/426 (89%), Positives = 402/426 (93%), Gaps = 1/426 (0%)
Frame = +3
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MA KE +D VEERVI+EEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV+RPEGKD
Sbjct: 114 MASKEV-LEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD 290
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
+++H LVLGTHTSDEQNHLV+A VQ+PNDD QFD S YDSEKGEFGGFGSV+GKIE EIK
Sbjct: 291 YALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIK 467
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVNRARYMPQNP IIATKTPS+DVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 468 INHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 647
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWN NL GHLLSASDDHT+CLWDISA PK+GK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 648 YGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 827
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSN TSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 828 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1007
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLHSFESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 1008WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 1187
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPE-GSVD 419
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+P+ + +
Sbjct: 1188DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEPDIAAAE 1367
Query: 420 PEGQGS 425
EGQG+
Sbjct: 1368LEGQGT 1385
>ref|NM_009031.1| Mus musculus retinoblastoma binding protein 7 (Rbbp7), mRNA
Length = 1748
Score = 798 bits (2062), Expect = 0.0
Identities = 379/426 (88%), Positives = 403/426 (93%), Gaps = 1/426 (0%)
Frame = +2
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MA KE F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKD
Sbjct: 260 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 436
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
+++H LVLGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIK
Sbjct: 437 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 616
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVNRARYMPQNP IIATKTPSSDVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEG
Sbjct: 617 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 796
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWN NLSGHLLSASDDHT+CLWDI+A PK+GK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 797 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 976
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 977 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1156
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 1157WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 1336
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSV-D 419
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+ + + +
Sbjct: 1337DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASE 1516
Query: 420 PEGQGS 425
EGQGS
Sbjct: 1517LEGQGS 1534
>gb|U35142.1|MMU35142 Mus musculus retinoblastoma-binding protein (mRbAp46) mRNA,
complete cds
Length = 1748
Score = 798 bits (2062), Expect = 0.0
Identities = 379/426 (88%), Positives = 403/426 (93%), Gaps = 1/426 (0%)
Frame = +2
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MA KE F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKD
Sbjct: 260 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 436
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
+++H LVLGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIK
Sbjct: 437 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 616
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVNRARYMPQNP IIATKTPSSDVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEG
Sbjct: 617 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 796
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWN NLSGHLLSASDDHT+CLWDI+A PK+GK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 797 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 976
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 977 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1156
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 1157WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 1336
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSV-D 419
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+ + + +
Sbjct: 1337DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASE 1516
Query: 420 PEGQGS 425
EGQGS
Sbjct: 1517LEGQGS 1534
>ref|NM_002893.2| Homo sapiens retinoblastoma binding protein 7 (RBBP7), mRNA
Length = 1946
Score = 798 bits (2062), Expect = 0.0
Identities = 379/426 (88%), Positives = 403/426 (93%), Gaps = 1/426 (0%)
Frame = +3
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MA KE F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKD
Sbjct: 288 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 464
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
+++H LVLGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIK
Sbjct: 465 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 644
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVNRARYMPQNP IIATKTPSSDVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEG
Sbjct: 645 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 824
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWN NLSGHLLSASDDHT+CLWDI+A PK+GK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 825 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 1004
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 1005SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1184
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 1185WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 1364
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSV-D 419
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+ + + +
Sbjct: 1365DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSE 1544
Query: 420 PEGQGS 425
EGQGS
Sbjct: 1545LEGQGS 1562
>ref|NM_031816.1| Rattus norvegicus retinoblastoma binding protein 7 (Rbbp7), mRNA
Length = 1947
Score = 798 bits (2062), Expect = 0.0
Identities = 379/426 (88%), Positives = 403/426 (93%), Gaps = 1/426 (0%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MA KE F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKD
Sbjct: 274 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 450
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
+++H LVLGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIK
Sbjct: 451 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 630
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVNRARYMPQNP IIATKTPSSDVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEG
Sbjct: 631 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 810
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWN NLSGHLLSASDDHT+CLWDI+A PK+GK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 811 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 990
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 991 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1170
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 1171WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 1350
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSV-D 419
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+ + + +
Sbjct: 1351DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSE 1530
Query: 420 PEGQGS 425
EGQGS
Sbjct: 1531LEGQGS 1548
>gb|AF090306.1|AF090306 Rattus norvegicus retinoblastoma binding protein mRNA, complete cds
Length = 1947
Score = 798 bits (2062), Expect = 0.0
Identities = 379/426 (88%), Positives = 403/426 (93%), Gaps = 1/426 (0%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MA KE F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKD
Sbjct: 274 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 450
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
+++H LVLGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIK
Sbjct: 451 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 630
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVNRARYMPQNP IIATKTPSSDVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEG
Sbjct: 631 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 810
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWN NLSGHLLSASDDHT+CLWDI+A PK+GK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 811 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 990
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 991 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1170
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 1171WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 1350
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSV-D 419
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+ + + +
Sbjct: 1351DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSE 1530
Query: 420 PEGQGS 425
EGQGS
Sbjct: 1531LEGQGS 1548
>emb|X72841.1|HSIEF7442 H.sapiens IEF 7442 mRNA
Length = 1943
Score = 798 bits (2062), Expect = 0.0
Identities = 379/426 (88%), Positives = 403/426 (93%), Gaps = 1/426 (0%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MA KE F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKD
Sbjct: 286 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 462
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
+++H LVLGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIK
Sbjct: 463 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 642
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVNRARYMPQNP IIATKTPSSDVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEG
Sbjct: 643 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 822
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWN NLSGHLLSASDDHT+CLWDI+A PK+GK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 823 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 1002
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 1003SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1182
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 1183WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 1362
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSV-D 419
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+ + + +
Sbjct: 1363DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSE 1542
Query: 420 PEGQGS 425
EGQGS
Sbjct: 1543LEGQGS 1560
>gb|BC003785.1|BC003785 Mus musculus, retinoblastoma binding protein 7, clone MGC:6013
IMAGE:3600013, mRNA, complete cds
Length = 1918
Score = 798 bits (2062), Expect = 0.0
Identities = 379/426 (88%), Positives = 403/426 (93%), Gaps = 1/426 (0%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MA KE F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKD
Sbjct: 250 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 426
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
+++H LVLGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIK
Sbjct: 427 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 606
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVNRARYMPQNP IIATKTPSSDVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEG
Sbjct: 607 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 786
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWN NLSGHLLSASDDHT+CLWDI+A PK+GK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 787 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 966
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 967 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1146
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 1147WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 1326
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSV-D 419
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+ + + +
Sbjct: 1327DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASE 1506
Query: 420 PEGQGS 425
EGQGS
Sbjct: 1507LEGQGS 1524
>gb|U35143.1|HSU35143 Human retinoblastoma-binding protein (RbAp46) mRNA, complete cds
Length = 1929
Score = 798 bits (2062), Expect = 0.0
Identities = 379/426 (88%), Positives = 403/426 (93%), Gaps = 1/426 (0%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MA KE F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKD
Sbjct: 262 MASKEM-FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD 438
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
+++H LVLGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIK
Sbjct: 439 YALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIK 618
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVNRARYMPQNP IIATKTPSSDVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEG
Sbjct: 619 INHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEG 798
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWN NLSGHLLSASDDHT+CLWDI+A PK+GK+VDAK IFTGH+AVVEDV+WHLLHE
Sbjct: 799 YGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHE 978
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATGSADKTVAL
Sbjct: 979 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 1158
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGEEQS EDAE
Sbjct: 1159WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 1338
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSV-D 419
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE+ + + +
Sbjct: 1339DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTSE 1518
Query: 420 PEGQGS 425
EGQGS
Sbjct: 1519LEGQGS 1536
>ref|XM_030423.1| Homo sapiens similar to retinoblastoma binding protein 4 (H.
sapiens) (LOC153102), mRNA
Length = 1401
Score = 789 bits (2037), Expect = 0.0
Identities = 379/404 (93%), Positives = 391/404 (95%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MADKEAAFD+ VEE VIN+EYKIWKKNTPFLY+LVMTHALEWPSLTAQWLPDVTRPEGKD
Sbjct: 64 MADKEAAFDNTVEE*VINKEYKIWKKNTPFLYNLVMTHALEWPSLTAQWLPDVTRPEGKD 243
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
FS+HRLVLGTHTSDEQNHLVIASVQLP+DDAQFDASHYD EKGEFGGFGSVSGKIEIEIK
Sbjct: 244 FSLHRLVLGTHTSDEQNHLVIASVQLPDDDAQFDASHYDREKGEFGGFGSVSGKIEIEIK 423
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEG+VNRARYMPQNPCII TKTPSSD+LVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
Sbjct: 424 INHEGKVNRARYMPQNPCIITTKTPSSDILVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 603
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWN NLSGHLLSASDDHTICLWDISAVPK+GKVVDAKTIFTGHTA+VEDVSWHLL E
Sbjct: 604 YGLSWNLNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAIVEDVSWHLLCE 783
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLFGSVADDQKLMIWDTRSNNTSKPSHSVD HTAEVNCLSF+PYSEFILATGSADKTVAL
Sbjct: 784 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDTHTAEVNCLSFSPYSEFILATGSADKTVAL 963
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD R NV DLSKIGEEQSPEDAE
Sbjct: 964 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDHRPNV*DLSKIGEEQSPEDAE 1143
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
D PPELLFIHGGHTAKI DFSWNP+EP V+CSVSEDNIMQVWQM
Sbjct: 1144DRPPELLFIHGGHTAKIPDFSWNPSEP*VMCSVSEDNIMQVWQM 1275
>ref|XM_010272.2| Homo sapiens retinoblastoma binding protein 7 (RBBP7), mRNA
Length = 1642
Score = 545 bits (1405), Expect(2) = 0.0
Identities = 254/285 (89%), Positives = 272/285 (95%)
Frame = +3
Query: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLV 67
F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKD+++H LV
Sbjct: 3 FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLV 182
Query: 68 LGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEV 127
LGTHTSDEQNHLV+A V +PNDDAQFDASH DS+KGEFGGFGSV+GKIE EIKINHEGEV
Sbjct: 183 LGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEV 362
Query: 128 NRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNP 187
NRARYMPQNP IIATKTPSSDVLVFDYTKHP+KPDPSGECNPDLRLRGHQKEGYGLSWN
Sbjct: 363 NRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNS 542
Query: 188 NLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVA 247
NLSGHLLSASDDHT+CLWDI+A PK+GK+VDAK IFTGH+AVVEDV+WHLLHESLFGSVA
Sbjct: 543 NLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVA 722
Query: 248 DDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
DDQKLMIWDTRSN TSKPSH VDAHTAEVNCLSFNPYSEFILATG
Sbjct: 723 DDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 857
Score = 255 bits (651), Expect(2) = 0.0
Identities = 121/134 (90%), Positives = 127/134 (94%), Gaps = 1/134 (0%)
Frame = +2
Query: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE 352
SADKTVALWDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRLNVWDLSKIGE
Sbjct: 857 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 1036
Query: 353 EQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 412
EQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ+WQMAENIYNDE
Sbjct: 1037EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDE 1216
Query: 413 DPEGSV-DPEGQGS 425
+ + + + EGQGS
Sbjct: 1217ESDVTTSELEGQGS 1258
Score = 49.3 bits (116), Expect = 8e-04
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Frame = +2
Query: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKT-------IFTGHTA 228
H+ E + + W+P+ L S+ D + +WD+S + ++ DA+ I GHTA
Sbjct: 926 HKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTA 1105
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSN 260
+ D SW+ + SV++D + IW N
Sbjct: 1106 KISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 1201
Score = 48.5 bits (114), Expect = 0.001
Identities = 25/114 (21%), Positives = 53/114 (45%), Gaps = 13/114 (11%)
Frame = +2
Query: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
D+ + +WD R N H+ ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 863 DKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGE 1036
Query: 309 K-------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
+ L H +I W+P+ ++ S D + +W +++
Sbjct: 1037EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAE 1198
Score = 46.6 bits (109), Expect = 0.005
Identities = 33/145 (22%), Positives = 60/145 (40%), Gaps = 9/145 (6%)
Frame = +3
Query: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 322
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 348 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 527
Query: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
+ W+ + L S+ D + +WD++ +E DA+ I GH+A + D +W
Sbjct: 528 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 686
Query: 383 NPNEPWVICSVSEDNIMQVWQMAEN 407
+ + SV++D + +W N
Sbjct: 687 HLLHESLFGSVADDQKLMIWDTRSN 761
Score = 46.2 bits (108), Expect = 0.006
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 11/118 (9%)
Frame = +2
Query: 197 SDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWD 256
S D T+ LWD+ + K F H + V W +E++ S D++L +WD
Sbjct: 857 SADKTVALWDLRNLKLKLHT------FESHKDEIFQVHWSPHNETILASSGTDRRLNVWD 1018
Query: 257 TRSNNTSKPSHSVD-----------AHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
+ + + HTA+++ S+NP +++ + S D + +W +
Sbjct: 1019LSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 1192
Score = 38.5 bits (88), Expect = 1.3
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Frame = +2
Query: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDL 171
K+++ +H+ E+ + + P N I+A+ + V+D +K + + + P+L
Sbjct: 899 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 1078
Query: 172 RL--RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDIS 208
GH + SWNPN + S S+D+ + +W ++
Sbjct: 1079LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 1195
>gb|BC015123.1|BC015123 Homo sapiens, Similar to retinoblastoma-binding protein 4, clone
IMAGE:3686783, mRNA, partial cds
Length = 2071
Score = 762 bits (1968), Expect = 0.0
Identities = 373/392 (95%), Positives = 376/392 (95%), Gaps = 4/392 (1%)
Frame = +1
Query: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI
Sbjct: 4 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 183
Query: 122 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY 181
NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY
Sbjct: 184 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY 363
Query: 182 GLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHES 241
GLSWNPNLSGHLLSASDDHTICLWDISAVPK+GKVVDAKTIFTGHTAVVEDVSWHLLHES
Sbjct: 364 GLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES 543
Query: 242 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
Sbjct: 544 LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 723
Query: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAED 361
DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAED
Sbjct: 724 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAED 903
Query: 362 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDPE 421
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDPE
Sbjct: 904 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDPE 1083
Query: 422 GQGSRRVCTCDPRL----SLFSSEPRDGFNIG 449
GQGS C L LFSS+P + FN G
Sbjct: 1084GQGS---*ICLYLL*F*TPLFSSQP*E*FNTG 1170
>emb|AL390237.9|AL390237 Human DNA sequence from clone RP11-278J20 on chromosome 6. Contains
ESTs, STSs and GSSs. Contains an RBBP4
(retinoblastoma-binding protein 4) pseudogene and a
KIAA0797 pseudogene, complete sequence [Homo sapiens]
Length = 140120
Score = 409 bits (1052), Expect(3) = 0.0
Identities = 194/215 (90%), Positives = 201/215 (93%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MADKEAAFDDAVEERVINEEYK WKKNTPFLYDLV+THALEWPSLTAQWLPDVTRPEGKD
Sbjct: 32392 MADKEAAFDDAVEERVINEEYKKWKKNTPFLYDLVLTHALEWPSLTAQWLPDVTRPEGKD 32571
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
FSIH+LVLGT T DEQNHLVIASVQLPNDD QFDASHY++EKGEFGGF SV GKIEIEI
Sbjct: 32572 FSIHQLVLGTCTLDEQNHLVIASVQLPNDDTQFDASHYNTEKGEFGGFYSVRGKIEIEIN 32751
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVN+ RYMPQNPCII+TKTPSSDVLVFDYTKHPSKPDPSGECNPDL L GHQKEG
Sbjct: 32752 INHEGEVNKVRYMPQNPCIISTKTPSSDVLVFDYTKHPSKPDPSGECNPDLCLCGHQKEG 32931
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGK 215
YGLSWNPNL GHLL ASDDHT CLWD SAVPK+GK
Sbjct: 32932 YGLSWNPNLCGHLLGASDDHTSCLWDSSAVPKEGK 33036
Score = 279 bits (713), Expect(3) = 0.0
Identities = 142/176 (80%), Positives = 151/176 (85%), Gaps = 2/176 (1%)
Frame = +3
Query: 278 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG 337
CLSFNPYSEFILATGSADKTVAL DLRNLKLKLHSFE KD+IFQVQWSPHNETILASSG
Sbjct: 33234 CLSFNPYSEFILATGSADKTVALRDLRNLKLKLHSFELLKDKIFQVQWSPHNETILASSG 33413
Query: 338 TDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 397
T+ RLNVWDLSKIGE+QSPED +D PPELLFIHGGHTAKI DFS NPNEPWVICSV EDN
Sbjct: 33414 TNHRLNVWDLSKIGEKQSPEDKKDRPPELLFIHGGHTAKIPDFSGNPNEPWVICSVPEDN 33593
Query: 398 IMQVWQMAENIYNDEDPEGSVDPEGQGSRRVCTCDPRL--SLFSSEPRDGFNIGLR 451
IMQVWQMAENIYN+EDPEGSVDPEGQ S +C LFSS+P + FN G +
Sbjct: 33594 IMQVWQMAENIYNNEDPEGSVDPEGQES-*ICLYFL*F*TPLFSSQP*E*FNTGFK 33758
Score = 119 bits (299), Expect(3) = 0.0
Identities = 57/65 (87%), Positives = 60/65 (91%)
Frame = +2
Query: 212 KKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDA 271
++ KVVD K IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDT SN+ SKPSHSVDA
Sbjct: 33026 RREKVVDVKIIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTCSNSASKPSHSVDA 33205
Query: 272 HTAEV 276
HTAEV
Sbjct: 33206 HTAEV 33220
Score = 45.8 bits (107), Expect = 0.008
Identities = 29/104 (27%), Positives = 46/104 (43%), Gaps = 9/104 (8%)
Frame = +3
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKT-------IFTGHTAVVEDV 233
+ + W+P+ L S+ +H + +WD+S + +K D K I GHTA + D
Sbjct: 33363 FQVQWSPHNETILASSGTNHRLNVWDLSKIGEKQSPEDKKDRPPELLFIHGGHTAKIPDF 33542
Query: 234 SWHLLHESLFGSVADDQKLMIWDTRSN--NTSKPSHSVDAHTAE 275
S + + SV +D + +W N N P SVD E
Sbjct: 33543 SGNPNEPWVICSVPEDNIMQVWQMAENIYNNEDPEGSVDPEGQE 33674
Score = 38.5 bits (88), Expect = 1.3
Identities = 23/96 (23%), Positives = 47/96 (48%)
Frame = +1
Query: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
K+++ +H+ E+ +V++ P N I+++ + V+D +K P+ + + P+L
Sbjct: 32731 KIEIEININHEGEVNKVRYMPQNPCIISTKTPSSDVLVFDYTK--HPSKPDPSGECNPDL 32904
Query: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
GH + SWNPN + S+D+ +W
Sbjct: 32905 CLC--GHQKEGYGLSWNPNLCGHLLGASDDHTSCLW 33006
Score = 33.1 bits (74), Expect(2) = 0.031
Identities = 17/55 (30%), Positives = 27/55 (48%)
Frame = +2
Query: 365 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419
++ I GHTA + D SW+ + SV++D + +W N + P SVD
Sbjct: 33044 DVKIIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTCSN--SASKPSHSVD 33202
Score = 29.6 bits (65), Expect(2) = 0.031
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 9/99 (9%)
Frame = +1
Query: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES---------HKDEIFQ 322
H EVN + + P + I++T + V ++D K H+ E +
Sbjct: 32758 HEGEVNKVRYMPQNPCIISTKTPSSDVLVFDYTKHPSKPDPSGECNPDLCLCGHQKEGYG 32937
Query: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAED 361
+ W+P+ L + D +WD S + +E ED
Sbjct: 32938 LSWNPNLCGHLLGASDDHTSCLWDSSAVPKEGKSGGCED 33054
>ref|XM_069157.2| Homo sapiens similar to CHROMATIN ASSEMBLY FACTOR 1 P48 SUBUNIT
(CAF-1 P48 SUBUNIT) (RETINOBLASTOMA BINDING PROTEIN P48)
(RETINOBLASTOMA-BINDING PROTEIN 4) (MSI1 PROTEIN
HOMOLOG) (LOC135054), mRNA
Length = 1221
Score = 696 bits (1795), Expect = 0.0
Identities = 349/428 (81%), Positives = 363/428 (84%), Gaps = 3/428 (0%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MADKEAAFDD VEERVINEEYK WKKNTPFLYDLV+THA+EWPSLTAQWLPDV RPEGKD
Sbjct: 1 MADKEAAFDDTVEERVINEEYKKWKKNTPFLYDLVLTHAVEWPSLTAQWLPDVIRPEGKD 180
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
FSIH+LVLGT+T DEQNHLVI SVQLPNDD QFDASHY++EKGEFGGF SV GKIEIEIK
Sbjct: 181 FSIHQLVLGTYTLDEQNHLVITSVQLPNDDTQFDASHYNTEKGEFGGFYSVRGKIEIEIK 360
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVN+ RYMPQN CII+TKTPSSDVLVFDYTKHPSK DPSGEC+PDL LRGHQKEG
Sbjct: 361 INHEGEVNKVRYMPQNSCIISTKTPSSDVLVFDYTKHPSKQDPSGECDPDLCLRGHQKEG 540
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWNPNL GHLLSA T W HTAVV DVSWHLLHE
Sbjct: 541 YGLSWNPNLCGHLLSAQMT-TPAAW--------------------HTAVV-DVSWHLLHE 654
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCL---SFNPYSEFILATGSADKT 297
SLFGSVA DQKLMIW T S++ SKPSHSVDAHTAEV F EFILATGSADKT
Sbjct: 655 SLFGSVAGDQKLMIWGTCSHSASKPSHSVDAHTAEVTLTLLPLFQSLYEFILATGSADKT 834
Query: 298 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPE 357
VAL DLRNLKLKLHSFE HKD+IFQ QWSPHNETILASSGT+ RLNVWDLSKIGE+QSPE
Sbjct: 835 VALRDLRNLKLKLHSFELHKDKIFQFQWSPHNETILASSGTNHRLNVWDLSKIGEKQSPE 1014
Query: 358 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGS 417
D EDGPPELLFIHGGHTAKI DFSWNPNEPWVICSV EDNIMQVWQMAENIYNDE PEGS
Sbjct: 1015DKEDGPPELLFIHGGHTAKIPDFSWNPNEPWVICSVPEDNIMQVWQMAENIYNDEYPEGS 1194
Query: 418 VDPEGQGS 425
VDPEGQ S
Sbjct: 1195VDPEGQES 1218
>ref|XM_063256.2| Homo sapiens similar to retinoblastoma binding protein 4
(LOC122670), mRNA
Length = 1281
Score = 683 bits (1763), Expect = 0.0
Identities = 350/460 (76%), Positives = 369/460 (80%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MA KEAAFDD VE+ LT QWLPD RPEGKD
Sbjct: 1 MAVKEAAFDDGVED-----------------------------DLTVQWLPDEIRPEGKD 93
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
FSIHRLVLGTHT DEQNHLVIASVQ + + + KGEFGGFGSVSG IEIEIK
Sbjct: 94 FSIHRLVLGTHTLDEQNHLVIASVQPLM--IMLSLTRHTTTKGEFGGFGSVSGNIEIEIK 267
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVNRARYMPQN CII TKTPSSDVLVFDYTK+PSKPDPSGECNPDLRL GHQKEG
Sbjct: 268 INHEGEVNRARYMPQNSCIIKTKTPSSDVLVFDYTKYPSKPDPSGECNPDLRLCGHQKEG 447
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSWNPNLSGHLLSASDDHT+CLWDISA+PK+GKV DA+TIFTGHTAVVEDV W+LLHE
Sbjct: 448 YGLSWNPNLSGHLLSASDDHTVCLWDISAIPKEGKV-DARTIFTGHTAVVEDVFWNLLHE 624
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
SLF VADDQKLMIWDTRS NTSKPSHSVDA+TAEVNCLSFNPY EFILATGSADKTVAL
Sbjct: 625 SLFRLVADDQKLMIWDTRSKNTSKPSHSVDAYTAEVNCLSFNPYGEFILATGSADKTVAL 804
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
WDLRNLKLK+HSFESHKDEIFQVQWSPHNETILASSGTD LNVWDLSKI EEQSPEDAE
Sbjct: 805 WDLRNLKLKVHSFESHKDEIFQVQWSPHNETILASSGTDHGLNVWDLSKITEEQSPEDAE 984
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP 420
D PPE LFIHGGHTAKI DFS NP+EPW+ICSVSE+NIM+VWQMAENI N EDPEGSVDP
Sbjct: 985 DRPPE-LFIHGGHTAKIPDFSLNPSEPWMICSVSENNIMEVWQMAENISNGEDPEGSVDP 1161
Query: 421 EGQGSRRVCTCDPRLSLFSSEPRDGFNIGLRHRLCSATQL 460
EGQ S+ L F + LRH+LCSA L
Sbjct: 1162EGQESQ-------TLPFFLLNAESDLTLVLRHKLCSAIPL 1260
>gb|AE000658.1|HUAE000658 Homo sapiens T-cell receptor alpha delta locus from bases 1 to 250529
(section 1 of 5) of the Complete Nucleotide Sequence
Length = 250529
Score = 634 bits (1636), Expect(2) = 0.0
Identities = 330/436 (75%), Positives = 351/436 (79%), Gaps = 10/436 (2%)
Frame = +3
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEW--PSLTAQWLPDVTRPEG 58
MA KEAAFDD VE+ K KK TP + + W P L W P
Sbjct: 69594 MAVKEAAFDDGVEDE*STMSTKYGKK-TPLFFTI-------W**PML---WSGQPNCPVA 69740
Query: 59 KDFSIHRLVLGTHTSD--EQNHL------VIASVQLPNDDAQFDASHYDSEKGEFGGFGS 110
+ R H+S H+ + PND+A FDASHYDSEKGEFGGFGS
Sbjct: 69741 SR*NQTRRERFQHSSTCPGDTHIG*TKPSCYSQCATPNDNA*FDASHYDSEKGEFGGFGS 69920
Query: 111 VSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPD 170
VSG IEIEIKINHEGEVNRARYMPQN CII TKTPSSDVLVFDYTK+PSKPDPSGECNPD
Sbjct: 69921 VSGNIEIEIKINHEGEVNRARYMPQNSCIIKTKTPSSDVLVFDYTKYPSKPDPSGECNPD 70100
Query: 171 LRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVV 230
LRL GHQKEGYGLSWNPNLSGHLLSASDDHT+CLWDISA+PK+GKV DA+TIFTGHTAVV
Sbjct: 70101 LRLCGHQKEGYGLSWNPNLSGHLLSASDDHTVCLWDISAIPKEGKV-DARTIFTGHTAVV 70277
Query: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
EDV W+LLHESLF VADDQKLMIWDTRS NTSKPSHSVDA+TAEVNCLSFNPY EFILA
Sbjct: 70278 EDVFWNLLHESLFRLVADDQKLMIWDTRSKNTSKPSHSVDAYTAEVNCLSFNPYGEFILA 70457
Query: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
TGSADKTVALWDLRNLKLK+HSFESHKDEIFQVQWSPHNETILASSGTD LNVWDLSKI
Sbjct: 70458 TGSADKTVALWDLRNLKLKVHSFESHKDEIFQVQWSPHNETILASSGTDHGLNVWDLSKI 70637
Query: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYN 410
EEQSPEDAED PPE LFIHGGHTAKI DFS NP+EPW+ICSVSE+NIM+VWQMAENI N
Sbjct: 70638 TEEQSPEDAEDRPPE-LFIHGGHTAKIPDFSLNPSEPWMICSVSENNIMEVWQMAENISN 70814
Query: 411 DEDPEGSVDPEGQGSR 426
EDPEGSVDPEGQ S+
Sbjct: 70815 GEDPEGSVDPEGQESQ 70862
Score = 29.3 bits (64), Expect(2) = 0.0
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 426 RRVCT-CDPRLSLFSSEPRDGFNIGLRHRLCSATQL 460
RR+ T CD RL F + LRH+LCSA L
Sbjct: 70861 RRIFTSCDFRLPFFLLNAESDLTLVLRHKLCSAIPL 70968
>ref|NM_060151.1| chromatin assembly factor 1 P55 subunit like
Length = 1254
Score = 640 bits (1650), Expect = 0.0
Identities = 298/411 (72%), Positives = 349/411 (84%)
Frame = +1
Query: 9 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVL 68
D E+RV N+EYKIWKKNTPFLYDLVMTHALEWPSL+ QWLPDV + + D +IHRL+L
Sbjct: 16 DGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAK-DNSDHTIHRLIL 192
Query: 69 GTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVN 128
GTHTSDEQNHL+I+ + +P DDAQFDAS YD+E+ E+GGFG+V+GK+E +I+INHEGEVN
Sbjct: 193 GTHTSDEQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVN 372
Query: 129 RARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPN 188
RARYMPQ IIATK+P +DV +FDY KH + P + NP +RL+GH KEGYGLSWNPN
Sbjct: 373 RARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDN-TFNPLIRLKGHTKEGYGLSWNPN 549
Query: 189 LSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 248
G +LSASDD T+C WDI+A + AK +F GH +VVEDV+WH+LH+ +FGSV D
Sbjct: 550 KEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGD 729
Query: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
D+KL+IWD R TS P H +DAH+AEVNCL+FNPYSEFILATGSADKTVALWDLRNL++
Sbjct: 730 DKKLLIWDVR---TSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRM 900
Query: 309 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLF 368
KLHSFESH+DEIFQVQWSPHNETILASSGTD+RL+VWDLSKIGE+QS EDAEDGPPELLF
Sbjct: 901 KLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLF 1080
Query: 369 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419
IHGGHTAKISDFSWNPNEPWV+CSVSEDNI+QVWQMA+NIYN+ D E D
Sbjct: 1081IHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPAD 1233
Score = 56.2 bits (134), Expect = 6e-06
Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 7/160 (4%)
Frame = +1
Query: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 182
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 790 HSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHS---------FESHRDEIFQ 942
Query: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKT-------IFTGHTAVVEDVSW 235
+ W+P+ L S+ D + +WD+S + + DA+ I GHTA + D SW
Sbjct: 943 VQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSW 1122
Query: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 275
+ + SV++D L +W N ++ A E
Sbjct: 1123NPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPADVVE 1242
>gb|AF116530.1|AF116530 Caenorhabditis elegans synthetic multivulva protein LIN-53 p48
(lin-53) mRNA, complete cds
Length = 1470
Score = 640 bits (1650), Expect = 0.0
Identities = 298/411 (72%), Positives = 349/411 (84%)
Frame = +2
Query: 9 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVL 68
D E+RV N+EYKIWKKNTPFLYDLVMTHALEWPSL+ QWLPDV + + D +IHRL+L
Sbjct: 41 DGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAK-DNSDHTIHRLIL 217
Query: 69 GTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVN 128
GTHTSDEQNHL+I+ + +P DDAQFDAS YD+E+ E+GGFG+V+GK+E +I+INHEGEVN
Sbjct: 218 GTHTSDEQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVN 397
Query: 129 RARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPN 188
RARYMPQ IIATK+P +DV +FDY KH + P + NP +RL+GH KEGYGLSWNPN
Sbjct: 398 RARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDN-TFNPLIRLKGHTKEGYGLSWNPN 574
Query: 189 LSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 248
G +LSASDD T+C WDI+A + AK +F GH +VVEDV+WH+LH+ +FGSV D
Sbjct: 575 KEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGD 754
Query: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
D+KL+IWD R TS P H +DAH+AEVNCL+FNPYSEFILATGSADKTVALWDLRNL++
Sbjct: 755 DKKLLIWDVR---TSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRM 925
Query: 309 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLF 368
KLHSFESH+DEIFQVQWSPHNETILASSGTD+RL+VWDLSKIGE+QS EDAEDGPPELLF
Sbjct: 926 KLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLF 1105
Query: 369 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419
IHGGHTAKISDFSWNPNEPWV+CSVSEDNI+QVWQMA+NIYN+ D E D
Sbjct: 1106IHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPAD 1258
Score = 56.2 bits (134), Expect = 6e-06
Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 7/160 (4%)
Frame = +2
Query: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 182
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 815 HSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHS---------FESHRDEIFQ 967
Query: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKT-------IFTGHTAVVEDVSW 235
+ W+P+ L S+ D + +WD+S + + DA+ I GHTA + D SW
Sbjct: 968 VQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSW 1147
Query: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 275
+ + SV++D L +W N ++ A E
Sbjct: 1148NPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPADVVE 1267
>emb|AL512427.10|AL512427 Human DNA sequence from clone RP11-325M4 on chromosome 6, complete
sequence [Homo sapiens]
Length = 201657
Score = 631 bits (1627), Expect = e-179
Identities = 327/471 (69%), Positives = 359/471 (75%), Gaps = 20/471 (4%)
Frame = +3
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MADKEAAFDD VEERVINEEYK WKKNTPFLYDLV+THA+EWPSLTAQWLPDV RPEGKD
Sbjct: 55878 MADKEAAFDDTVEERVINEEYKKWKKNTPFLYDLVLTHAVEWPSLTAQWLPDVIRPEGKD 56057
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
FSIH+LVLGT+T DEQNHLVI SVQLPNDD QFDASHY++EKGEFGGF SV GKIEIEIK
Sbjct: 56058 FSIHQLVLGTYTLDEQNHLVITSVQLPNDDTQFDASHYNTEKGEFGGFYSVRGKIEIEIK 56237
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVN+ RYMPQN CII+TKTPSSDVLVFDYTKHPSK DPSGEC+PDL LRGHQKEG
Sbjct: 56238 INHEGEVNKVRYMPQNSCIISTKTPSSDVLVFDYTKHPSKQDPSGECDPDLCLRGHQKEG 56417
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGK------------------VVDAKTI 222
YGLSWNPNL GHLLSA ++ K + + ++
Sbjct: 56418 YGLSWNPNLCGHLLSAQMTTPAACGTSVLFQRREKWWM*RPCLQGIQQ**MFPGICSMSL 56597
Query: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
G V+ ++ + +L ++ + A L + RS+ CLSFN
Sbjct: 56598 CLGQLLVIRNL*FGVLVHTVLPNQAIQLTLTLLK*RSH----------------CCLSFN 56729
Query: 283 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
PYSEFILATGSADKTVAL DLRNLKLKLHSFE HKD+IFQ QWSPHNETILASSGT+ RL
Sbjct: 56730 PYSEFILATGSADKTVALRDLRNLKLKLHSFELHKDKIFQFQWSPHNETILASSGTNHRL 56909
Query: 343 NVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
NVWDLSKIGE+QSPED EDGPPELLFIHGGHTAKI DFSWNPNEPWVICSV EDNIMQVW
Sbjct: 56910 NVWDLSKIGEKQSPEDKEDGPPELLFIHGGHTAKIPDFSWNPNEPWVICSVPEDNIMQVW 57089
Query: 403 QMAENIYNDEDPEGSVDPEGQGSRRVCTCDP--RLSLFSSEPRDGFNIGLR 451
QMAENIYNDE PEGSVDPEGQ S +C LFSS+P + FN G +
Sbjct: 57090 QMAENIYNDEYPEGSVDPEGQES-*ICLYFL*FYTPLFSSQP*E*FNTGFK 57239
>gb|AY059874.1| Arabidopsis thaliana WD-40 repeat protein MSI1 (At5g58230; MCK7.10)
mRNA, complete cds
Length = 1607
Score = 589 bits (1518), Expect = e-166
Identities = 278/421 (66%), Positives = 333/421 (79%), Gaps = 1/421 (0%)
Frame = +3
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
M E +EER+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD
Sbjct: 81 MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKD 260
Query: 61 FSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEI 119
+S+ +++LGTHTS+ E N+L++A VQLP DD + +A YD ++ EFGGFG +GK++I
Sbjct: 261 YSVQKMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQ 440
Query: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKE 179
+INH+GEVNRARYMPQNP IIATKT +++V VFDY+KHPSKP G CNPDL+LRGH E
Sbjct: 441 QINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSE 620
Query: 180 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLH 239
GYGLSW+ GHLLS SDD ICLWDI+A PK K +DA+ IF H VVEDV+WHL H
Sbjct: 621 GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKN-KSLDAQQIFKAHEGVVEDVAWHLRH 797
Query: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
E LFGSV DDQ L+IWD RS + SKP SV AH+ EVNCL+FNP++E+++ATGS DKTV
Sbjct: 798 EYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVK 977
Query: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA 359
L+DLR L LH+F+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDA
Sbjct: 978 LFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDA 1157
Query: 360 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419
EDGPPELLFIHGGHT+KISDFSWNP E WVI SV+EDNI+Q+WQMAENIY+DED +
Sbjct: 1158EDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDAPGEE 1337
Query: 420 P 420
P
Sbjct: 1338P 1340
>ref|NM_125208.1| Arabidopsis thaliana chromosome 5 CHR5v12152001 genomic sequence
Length = 1538
Score = 589 bits (1518), Expect = e-166
Identities = 278/421 (66%), Positives = 333/421 (79%), Gaps = 1/421 (0%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
M E +EER+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD
Sbjct: 76 MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKD 255
Query: 61 FSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEI 119
+S+ +++LGTHTS+ E N+L++A VQLP DD + +A YD ++ EFGGFG +GK++I
Sbjct: 256 YSVQKMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQ 435
Query: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKE 179
+INH+GEVNRARYMPQNP IIATKT +++V VFDY+KHPSKP G CNPDL+LRGH E
Sbjct: 436 QINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSE 615
Query: 180 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLH 239
GYGLSW+ GHLLS SDD ICLWDI+A PK K +DA+ IF H VVEDV+WHL H
Sbjct: 616 GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKN-KSLDAQQIFKAHEGVVEDVAWHLRH 792
Query: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
E LFGSV DDQ L+IWD RS + SKP SV AH+ EVNCL+FNP++E+++ATGS DKTV
Sbjct: 793 EYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVK 972
Query: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA 359
L+DLR L LH+F+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDA
Sbjct: 973 LFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDA 1152
Query: 360 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419
EDGPPELLFIHGGHT+KISDFSWNP E WVI SV+EDNI+Q+WQMAENIY+DED +
Sbjct: 1153EDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDAPGEE 1332
Query: 420 P 420
P
Sbjct: 1333P 1335
>gb|AF016846.1|AF016846 Arabidopsis thaliana WD-40 repeat protein (MSI1) mRNA, complete cds
Length = 1538
Score = 589 bits (1518), Expect = e-166
Identities = 278/421 (66%), Positives = 333/421 (79%), Gaps = 1/421 (0%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
M E +EER+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD
Sbjct: 76 MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKD 255
Query: 61 FSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEI 119
+S+ +++LGTHTS+ E N+L++A VQLP DD + +A YD ++ EFGGFG +GK++I
Sbjct: 256 YSVQKMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQ 435
Query: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKE 179
+INH+GEVNRARYMPQNP IIATKT +++V VFDY+KHPSKP G CNPDL+LRGH E
Sbjct: 436 QINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSE 615
Query: 180 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLH 239
GYGLSW+ GHLLS SDD ICLWDI+A PK K +DA+ IF H VVEDV+WHL H
Sbjct: 616 GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKN-KSLDAQQIFKAHEGVVEDVAWHLRH 792
Query: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
E LFGSV DDQ L+IWD RS + SKP SV AH+ EVNCL+FNP++E+++ATGS DKTV
Sbjct: 793 EYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVK 972
Query: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA 359
L+DLR L LH+F+SHK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+ EDA
Sbjct: 973 LFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDA 1152
Query: 360 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419
EDGPPELLFIHGGHT+KISDFSWNP E WVI SV+EDNI+Q+WQMAENIY+DED +
Sbjct: 1153EDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDAPGEE 1332
Query: 420 P 420
P
Sbjct: 1333P 1335
>gb|AF016845.1|AF016845 Lycopersicon esculentum WD-40 repeat protein (LeMSI1) mRNA,
complete cds
Length = 1716
Score = 585 bits (1509), Expect = e-165
Identities = 277/424 (65%), Positives = 334/424 (78%), Gaps = 2/424 (0%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
M E +EER+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD
Sbjct: 145 MGKDEDEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKD 324
Query: 61 FSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEI 119
+S+ +++LGTHTS+ E N+L++A VQLP +DA+ DA HYD ++ EFGGFG +GK++I
Sbjct: 325 YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRSEFGGFGCANGKVQIIQ 504
Query: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKE 179
+INH+GEVNRARYMPQNP IIATKT S++V VFDY+KHPSKP G CNPDLRLRGH E
Sbjct: 505 QINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTE 684
Query: 180 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLH 239
GYGLSW+ GHLLS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL H
Sbjct: 685 GYGLSWSQFKQGHLLSGSDDSHICLWDINATPKN-KALEAMQIFKVHEGVVEDVAWHLRH 861
Query: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
E LFGSV DDQ L +WD R+ + +KP SV AH +EVNCL+FNP++E+++ATGS DKTV
Sbjct: 862 EYLFGSVGDDQYLHVWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVK 1041
Query: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA 359
L+DLR + LH+ + HK+E+FQV W+P NETILAS RRL VWDLS+I EEQ+PEDA
Sbjct: 1042LFDLRKISTALHTLDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDA 1221
Query: 360 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDP-EGSV 418
EDGPPELLFIHGGHT+KISDFSWNP E WV+ SV+EDNI+Q+WQMAENIY+DED G
Sbjct: 1222EDGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPGDD 1401
Query: 419 DPEG 422
P+G
Sbjct: 1402APKG 1413
>ref|XM_069195.1| Homo sapiens similar to Chromatin assembly factor 1 subunit;
Nucleosome remodeling factor; Nucleosome remodeling
factor - 55kD (LOC135129), mRNA
Length = 1191
Score = 583 bits (1502), Expect = e-164
Identities = 310/428 (72%), Positives = 331/428 (76%), Gaps = 3/428 (0%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MADKEAAFDDAVEERVINEEYK WKKNTPFLYDLV+THALEWPSLTAQWLPDVTRPEGKD
Sbjct: 1 MADKEAAFDDAVEERVINEEYKKWKKNTPFLYDLVLTHALEWPSLTAQWLPDVTRPEGKD 180
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
FSIH+LVLGT T DEQNHLVIASVQLPNDD QFDASHY++EKGEFGGF SV GKIEIEI
Sbjct: 181 FSIHQLVLGTCTLDEQNHLVIASVQLPNDDTQFDASHYNTEKGEFGGFYSVRGKIEIEIN 360
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INHEGEVN+ I+ + V V D+R + G
Sbjct: 361 INHEGEVNK---------ILLESAIQTCVSV------------------DIRRKAMGFLG 459
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
+S L + + + T L ++ KVVD K IFTGHTAVVEDVSWHLLHE
Sbjct: 460 TQISVGTYLVLQMTTPAACGTAVLSQ-----RREKVVDVKIIFTGHTAVVEDVSWHLLHE 624
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLS---FNPYSEFILATGSADKT 297
SLFGSVADDQKLMIWDT SN+ SKPSHSVDAHTAEV F EFILATGSADKT
Sbjct: 625 SLFGSVADDQKLMIWDTCSNSASKPSHSVDAHTAEVTLTLLPLFQSLYEFILATGSADKT 804
Query: 298 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPE 357
VAL DLRNLKLKLHSFE KD+IFQVQWSPHNETILASSGT+ RLNVWDLSKIGE+QSPE
Sbjct: 805 VALRDLRNLKLKLHSFELLKDKIFQVQWSPHNETILASSGTNHRLNVWDLSKIGEKQSPE 984
Query: 358 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGS 417
D +D PPELLFIHGGHTAKI DFS NPNEPWVICSV EDNIMQVWQMAENIYN+EDPEGS
Sbjct: 985 DKKDRPPELLFIHGGHTAKIPDFSGNPNEPWVICSVPEDNIMQVWQMAENIYNNEDPEGS 1164
Query: 418 VDPEGQGS 425
VDPEGQ S
Sbjct: 1165VDPEGQES 1188
>gb|AF440219.1|AF440219 Zea mays cultivar B73 MSI type nucleosome/chromatin assembly factor
C (nfc103) mRNA, complete cds
Length = 1595
Score = 581 bits (1498), Expect = e-164
Identities = 276/413 (66%), Positives = 326/413 (78%), Gaps = 1/413 (0%)
Frame = +1
Query: 2 ADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDF 61
A E F VEER+INEEYKIWKKNTPFLYDLV+THALEWPSLT QWLPD T P GKD
Sbjct: 76 AADEEEFRAEVEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPDRTEPPGKDH 255
Query: 62 SIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
S+ +++LGTHTSD E N+L++A VQLP DDA+ DA HYD + + GGFG+ SGK++I +
Sbjct: 256 SVQKMILGTHTSDNEPNYLMLAQVQLPLDDAEADARHYDDDHADIGGFGAASGKVQIVQQ 435
Query: 121 INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG 180
INH+GEVNRARYMPQN IIATKT S++V VFDY+KHPSKP G CNPDLRL+GH EG
Sbjct: 436 INHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLKGHNSEG 615
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
YGLSW+ GHLLS SDD ICLWDI A + K +DA IF H VVEDV+WHL HE
Sbjct: 616 YGLSWSIFKEGHLLSGSDDAQICLWDIKA-NSRNKSLDALQIFKHHDGVVEDVAWHLRHE 792
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
LFGSV DD L+IWD RS +KP SV AH EVNCL+FNP++E+++ATGS DKTV L
Sbjct: 793 YLFGSVGDDYHLLIWDLRSPAPTKPVQSVVAHQGEVNCLAFNPFNEWVVATGSTDKTVKL 972
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE 360
+DLR + LH+F+ HK+E+FQV WSP NET+LAS RRL VWDLS+I +EQ+PEDAE
Sbjct: 973 FDLRKIDTSLHTFDCHKEEVFQVGWSPKNETVLASCCLGRRLMVWDLSRIDQEQTPEDAE 1152
Query: 361 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED 413
DGPPEL+FIHGGHT+KISDFSWNP E WV+ SV+EDNI+Q+WQMAENIY+DED
Sbjct: 1153DGPPELMFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDED 1311
>emb|Z81097.1|CEK07A1 Caenorhabditis elegans cosmid K07A1, complete sequence
Length = 39086
Score = 303 bits (777), Expect(2) = e-162
Identities = 140/167 (83%), Positives = 154/167 (91%)
Frame = -3
Query: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 312
+IWD R TS P H +DAH+AEVNCL+FNPYSEFILATGSADKTVALWDLRNL++KLHS
Sbjct: 38331 LIWDVR---TSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHS 38161
Query: 313 FESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGG 372
FESH+DEIFQVQWSPHNETILASSGTD+RL+VWDLSKIGE+QS EDAEDGPPELLFIHGG
Sbjct: 38160 FESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGG 37981
Query: 373 HTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419
HTAKISDFSWNPNEPWV+CSVSEDNI+QVWQMA+NIYN+ D E D
Sbjct: 37980 HTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPAD 37840
Score = 296 bits (759), Expect(2) = 5e-95
Identities = 156/321 (48%), Positives = 206/321 (63%), Gaps = 36/321 (11%)
Frame = -3
Query: 55 RPEGKDFSIHRLVLGTHT-SDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSG 113
+ E D S+HR++ GTHT QNHL+I+ + D +FD + +DSE+ EFGG+G S
Sbjct: 37329 KTENSDSSMHRMIHGTHTCGGVQNHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSA 37150
Query: 114 -KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLR 172
K + EIKINH GEV+RARYMP NP IIA++ PS DV +FDYTKHPS+P + + P LR
Sbjct: 37149 AKWDTEIKINHPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPKDT-KFRPQLR 36973
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDD--------------HTICLWDISAVPKKGKVVD 218
L+GH+ EGYG+SW+ GHLL+A DD IC WDI+A +
Sbjct: 36972 LKGHEGEGYGMSWSNTREGHLLTAGDDGMVFLTKDIHKYTFFKICHWDINANQTISGQIV 36793
Query: 219 AKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL--------------------MIWDTR 258
++ F GH++ EDVS+H LH +FGSV DD+KL +WD R
Sbjct: 36792 PQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKL*V*IHHTILSRFQNNFHVFRNLWDLR 36613
Query: 259 SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD 318
SKP + HTAEVNC++FNP+SE+ILATGS DKTVALWD+RN++ K+++ + H D
Sbjct: 36612 Q---SKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKHHND 36442
Query: 319 EIFQVQWSPHNETILASSGTD 339
EIFQV +SPH ET+LASSG+D
Sbjct: 36441 EIFQVSFSPHYETVLASSGSD 36379
Score = 294 bits (752), Expect(2) = e-162
Identities = 140/237 (59%), Positives = 174/237 (73%), Gaps = 17/237 (7%)
Frame = -1
Query: 33 DLVMTHALEWPSLTAQWLPDVTRP-----------------EGKDFSIHRLVLGTHTSDE 75
DLVMTHALEWPSL+ QWLPDV + + D +IHRL+LGTHTSDE
Sbjct: 39086 DLVMTHALEWPSLSVQWLPDVAKVCVLI*FTTFMK*IQII*DNSDHTIHRLILGTHTSDE 38907
Query: 76 QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQ 135
QNHL+I+ + +P DDAQFDAS YD+E+ E+GGFG+V+GK+E +I+INHEGEVNRARYMPQ
Sbjct: 38906 QNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVNRARYMPQ 38727
Query: 136 NPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLS 195
IIATK+P +DV +FDY KH + P NP +RL+GH KEGYGLSWNPN G +LS
Sbjct: 38726 KSNIIATKSPHADVYIFDYLKHSAVP-RDNTFNPLIRLKGHTKEGYGLSWNPNKEGLILS 38550
Query: 196 ASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
ASDD T+C WDI+A + AK +F GH +VVEDV+WH+LH+ +FGSV DD+KL
Sbjct: 38549 ASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKL 38379
Score = 77.8 bits (190), Expect(2) = 5e-95
Identities = 34/62 (54%), Positives = 42/62 (66%), Gaps = 2/62 (3%)
Frame = -1
Query: 341 RLNVWDLSKIGEEQSPEDAEDG--PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
R+ VWD+SKI + S A PPE++FIH GHT K++DFSWNPN PW ICS E N
Sbjct: 36317 RVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNA 36138
Query: 399 MQ 400
+Q
Sbjct: 36137 LQ 36132
Score = 63.2 bits (152), Expect = 5e-08
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Frame = -1
Query: 18 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPE-GK-DFSIHRLVLGTHT 72
++E++IWKKN P+LYD V+T +EWPSL+ QW+PDVT+ GK DF+ + L T
Sbjct: 37487 SKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKVRIGKYDFAFFIIFLRQRT 37317
Score = 56.2 bits (134), Expect = 6e-06
Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 7/160 (4%)
Frame = -3
Query: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 182
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 38283 HSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHS---------FESHRDEIFQ 38131
Query: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKT-------IFTGHTAVVEDVSW 235
+ W+P+ L S+ D + +WD+S + + DA+ I GHTA + D SW
Sbjct: 38130 VQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSW 37951
Query: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 275
+ + SV++D L +W N ++ A E
Sbjct: 37950 NPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPADVVE 37831
Score = 46.2 bits (108), Expect = 0.006
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Frame = -1
Query: 260 NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHS---F 313
+NT P + HT E LS+NP E ++ + S D+TV WD+ +N+ +L + F
Sbjct: 38645 DNTFNPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVF 38466
Query: 314 ESHKDEIFQVQWSPHNETILASSGTDRRL 342
+ H+ + V W ++ + S G D++L
Sbjct: 38465 KGHESVVEDVAWHVLHDGVFGSVGDDKKL 38379
Score = 44.7 bits (104), Expect = 0.019
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Frame = -1
Query: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR--------NLKLKLHSFESHKDEIFQV 323
H EVN + P I+AT S V ++D N L + H E + +
Sbjct: 38765 HEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGL 38586
Query: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWN 383
W+P+ E ++ S+ D+ + WD++ A+D + GH + + D +W+
Sbjct: 38585 SWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKD-------VFKGHESVVEDVAWH 38427
Query: 384 PNEPWVICSVSED 396
V SV +D
Sbjct: 38426 VLHDGVFGSVGDD 38388
Score = 40.8 bits (94), Expect = 0.27
Identities = 25/93 (26%), Positives = 42/93 (44%)
Frame = -1
Query: 315 SHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHT 374
+H+ E+ + ++ P I+A+ + ++D K P D P L GHT
Sbjct: 38768 NHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLK--HSAVPRDNTFNP---LIRLKGHT 38604
Query: 375 AKISDFSWNPNEPWVICSVSEDNIMQVWQMAEN 407
+ SWNPN+ +I S S+D + W + N
Sbjct: 38603 KEGYGLSWNPNKEGLILSASDDQTVCHWDINAN 38505
>gb|AF297468.1|AF297468 Schistosoma mansoni strain NMRI chromatin assembly factor 1 small
subunit-like protein (RBAP48) mRNA, complete cds
Length = 1036
Score = 461 bits (1185), Expect = e-128
Identities = 213/295 (72%), Positives = 249/295 (84%)
Frame = +2
Query: 9 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVL 68
+D VEERVINEEYKIWK+NTPFLYD++M+H LEWPSLTAQWLP V R G+D+S+HRL+L
Sbjct: 110 EDIVEERVINEEYKIWKRNTPFLYDMLMSHCLEWPSLTAQWLPSVERT-GRDYSVHRLIL 286
Query: 69 GTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVN 128
GTHTSDEQNHL+I +V LPND A+FDAS YDSE+G+FGGF SGK+EI +KINHEGEVN
Sbjct: 287 GTHTSDEQNHLLIVTVHLPNDQAEFDASAYDSERGDFGGFYFPSGKLEISMKINHEGEVN 466
Query: 129 RARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPN 188
RAR+MPQNP IIATKTPS DVL+F+Y +HP K C PDLRL+GHQKEGYGLSWN +
Sbjct: 467 RARFMPQNPDIIATKTPSGDVLIFNYPRHPPKTPSDRGCQPDLRLKGHQKEGYGLSWNVS 646
Query: 189 LSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 248
L+GHLLSASDD TICLWD++A P G +DA IFTGH +VVEDVSWHL H +FGSVAD
Sbjct: 647 LNGHLLSASDDQTICLWDVNAAPLDGCDLDAMAIFTGHHSVVEDVSWHLFHGHIFGSVAD 826
Query: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
D KLM+WDTRS+N +KP H VDAHTAEVNCL+FNP+SEFI+ATGSADK + + L
Sbjct: 827 DNKLMVWDTRSSNRTKPQHQVDAHTAEVNCLAFNPFSEFIIATGSADKVIKYFTL 991
Score = 52.4 bits (124), Expect = 9e-05
Identities = 38/159 (23%), Positives = 66/159 (40%), Gaps = 6/159 (3%)
Frame = +2
Query: 257 TRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------L 310
T S+ +P + H E LS+N L + S D+T+ LWD+ L +
Sbjct: 563 TPSDRGCQPDLRLKGHQKEGYGLSWNVSLNGHLLSASDDQTICLWDVNAAPLDGCDLDAM 742
Query: 311 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIH 370
F H + V W + I S D +L VWD ++ P+ D
Sbjct: 743 AIFTGHHSVVEDVSWHLFHGHIFGSVADDNKLMVWD-TRSSNRTKPQHQVDA-------- 895
Query: 371 GGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
HTA+++ ++NP ++I + S D +++ + + Y
Sbjct: 896 --HTAEVNCLAFNPFSEFIIATGSADKVIKYFTLVSFFY 1006
Score = 47.4 bits (111), Expect = 0.003
Identities = 39/157 (24%), Positives = 68/157 (42%), Gaps = 9/157 (5%)
Frame = +2
Query: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 322
H EVN F P + I+AT + V +++ K S + H+ E +
Sbjct: 449 HEGEVNRARFMPQNPDIIATKTPSGDVLIFNYPRHPPKTPSDRGCQPDLRLKGHQKEGYG 628
Query: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
+ W+ L S+ D+ + +WD++ +P D D + + I GH + + D SW
Sbjct: 629 LSWNVSLNGHLLSASDDQTICLWDVNA-----APLDGCD--LDAMAIFTGHHSVVEDVSW 787
Query: 383 NPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419
+ + SV++DN + VW + N P+ VD
Sbjct: 788 HLFHGHIFGSVADDNKLMVWDTRSS--NRTKPQHQVD 892
>ref|NM_060150.1| retinablastoma-binding protein RBAP46 like
Length = 1239
Score = 458 bits (1178), Expect = e-127
Identities = 216/399 (54%), Positives = 290/399 (72%), Gaps = 4/399 (1%)
Frame = +1
Query: 18 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHT-SDEQ 76
++E++IWKKN P+LYD V+T +EWPSL+ QW+PDVT+ E D S+HR++ GTHT Q
Sbjct: 31 SKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDSSMHRMIHGTHTCGGVQ 210
Query: 77 NHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSG-KIEIEIKINHEGEVNRARYMPQ 135
NHL+I+ + D +FD + +DSE+ EFGG+G S K + EIKINH GEV+RARYMP
Sbjct: 211 NHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSAAKWDTEIKINHPGEVHRARYMPH 390
Query: 136 NPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLS 195
NP IIA++ PS DV +FDYTKHPS+P + + P LRL+GH+ EGYG+SW+ GHLL+
Sbjct: 391 NPFIIASRGPSDDVYIFDYTKHPSEPKDT-KFRPQLRLKGHEGEGYGMSWSNTREGHLLT 567
Query: 196 ASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW 255
A DD IC WDI+A + ++ F GH++ EDVS+H LH +FGSV DD+KL +W
Sbjct: 568 AGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLW 747
Query: 256 DTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES 315
D R SKP + HTAEVNC++FNP+SE+ILATGS DKTVALWD+RN++ K+++ +
Sbjct: 748 DLRQ---SKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKH 918
Query: 316 HKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA--EDGPPELLFIHGGH 373
H DEIFQV +SPH ET+LASSG+D R+ VWD+SKI + S A + PPE++FIH GH
Sbjct: 919 HNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGH 1098
Query: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 412
T K++DFSWNPN PW ICS E N +QVW+++ ++ + E
Sbjct: 1099TGKVADFSWNPNRPWTICSSDEFNALQVWEVSNSLVSSE 1215
Score = 50.1 bits (118), Expect = 4e-04
Identities = 37/163 (22%), Positives = 71/163 (42%), Gaps = 13/163 (7%)
Frame = +1
Query: 166 ECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTG 225
+ P L GH E +++NP L + S D T+ LWD+ + KK +
Sbjct: 757 QSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKH------ 918
Query: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR-----SNNTSKPSHSVD--------AH 272
H + VS+ +E++ S D ++++WD S++++ S SV H
Sbjct: 919 HNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGH 1098
Query: 273 TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES 315
T +V S+NP + + + + +W++ N + +E+
Sbjct: 1099TGKVADFSWNPNRPWTICSSDEFNALQVWEVSNSLVSSEKWET 1227
>gb|AC009904.7| Drosophila melanogaster, chromosome 3R, region 88E-88E, BAC clone
BACR32A03, complete sequence
Length = 182601
Score = 451 bits (1159), Expect = e-125
Identities = 210/227 (92%), Positives = 223/227 (97%)
Frame = +3
Query: 189 LSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 248
L+G+LLSASDDHTICLWDI+A PK+ +V+DAK IFTGHTAVVEDV+WHLLHESLFGSVAD
Sbjct: 136653 LTGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD 136832
Query: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
DQKLMIWDTR+NNTSKPSH+VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL
Sbjct: 136833 DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 137012
Query: 309 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLF 368
KLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLF
Sbjct: 137013 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 137192
Query: 369 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPE 415
IHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQVWQMAEN+YNDE+PE
Sbjct: 137193 IHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPE 137333
Score = 365 bits (938), Expect = 4e-99
Identities = 167/196 (85%), Positives = 184/196 (93%)
Frame = +1
Query: 7 AFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRL 66
+FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT+ +GKD+S+HRL
Sbjct: 135997 SFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRL 136176
Query: 67 VLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGE 126
+LGTHTSDEQNHL+IASVQLP++DAQFD SHYD+EKGEFGGFGSV GKIEIEIKINHEGE
Sbjct: 136177 ILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGE 136356
Query: 127 VNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWN 186
VNRARYMPQN C+IATKTPSSDVLVFDYTKHPSKP+PSGEC PDLRLRGHQKEGYGLSWN
Sbjct: 136357 VNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWN 136536
Query: 187 PNLSGHLLSASDDHTI 202
PNL+G ++ + +
Sbjct: 136537 PNLNGKCVAVPSTYIL 136584
Score = 58.9 bits (141), Expect = 1e-06
Identities = 41/165 (24%), Positives = 70/165 (41%), Gaps = 10/165 (6%)
Frame = +3
Query: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRG---HQKE 179
H EVN + P + I+AT + V ++D N L+L H+ E
Sbjct: 136902 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHSFESHKDE 137045
Query: 180 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKT-------IFTGHTAVVED 232
+ + W+P+ L S+ D + +WD+S + ++ DA+ I GHTA + D
Sbjct: 137046 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 137225
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVN 277
SW+ + SV++D + +W N + + A E N
Sbjct: 137226 FSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETN 137360
Score = 54.3 bits (129), Expect = 2e-05
Identities = 35/146 (23%), Positives = 61/146 (40%), Gaps = 11/146 (7%)
Frame = +3
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTA 228
P + H E LS+NP L + S D T+ LWD+ + K F H
Sbjct: 136881 PSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHSFESHKD 137042
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-----------AHTAEVN 277
+ V W +E++ S D++L +WD + + + HTA+++
Sbjct: 137043 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 137222
Query: 278 CLSFNPYSEFILATGSADKTVALWDL 303
S+NP +I+ + S D + +W +
Sbjct: 137223 DFSWNPNEPWIICSVSEDNIMQVWQM 137300
>gb|AE003708.2|AE003708 Drosophila melanogaster genomic scaffold 142000013386035 section 33 of
105, complete sequence
Length = 235457
Score = 451 bits (1159), Expect = e-125
Identities = 210/227 (92%), Positives = 223/227 (97%)
Frame = +2
Query: 189 LSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 248
L+G+LLSASDDHTICLWDI+A PK+ +V+DAK IFTGHTAVVEDV+WHLLHESLFGSVAD
Sbjct: 29201 LTGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD 29380
Query: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
DQKLMIWDTR+NNTSKPSH+VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL
Sbjct: 29381 DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 29560
Query: 309 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLF 368
KLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLF
Sbjct: 29561 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 29740
Query: 369 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPE 415
IHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQVWQMAEN+YNDE+PE
Sbjct: 29741 IHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPE 29881
Score = 365 bits (938), Expect = 4e-99
Identities = 167/196 (85%), Positives = 184/196 (93%)
Frame = +3
Query: 7 AFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRL 66
+FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT+ +GKD+S+HRL
Sbjct: 28545 SFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRL 28724
Query: 67 VLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGE 126
+LGTHTSDEQNHL+IASVQLP++DAQFD SHYD+EKGEFGGFGSV GKIEIEIKINHEGE
Sbjct: 28725 ILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGE 28904
Query: 127 VNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWN 186
VNRARYMPQN C+IATKTPSSDVLVFDYTKHPSKP+PSGEC PDLRLRGHQKEGYGLSWN
Sbjct: 28905 VNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWN 29084
Query: 187 PNLSGHLLSASDDHTI 202
PNL+G ++ + +
Sbjct: 29085 PNLNGKCVAVPSTYIL 29132
Score = 58.9 bits (141), Expect = 1e-06
Identities = 41/165 (24%), Positives = 70/165 (41%), Gaps = 10/165 (6%)
Frame = +2
Query: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRG---HQKE 179
H EVN + P + I+AT + V ++D N L+L H+ E
Sbjct: 29450 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHSFESHKDE 29593
Query: 180 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKT-------IFTGHTAVVED 232
+ + W+P+ L S+ D + +WD+S + ++ DA+ I GHTA + D
Sbjct: 29594 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 29773
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVN 277
SW+ + SV++D + +W N + + A E N
Sbjct: 29774 FSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETN 29908
Score = 54.3 bits (129), Expect = 2e-05
Identities = 35/146 (23%), Positives = 61/146 (40%), Gaps = 11/146 (7%)
Frame = +2
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTA 228
P + H E LS+NP L + S D T+ LWD+ + K F H
Sbjct: 29429 PSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHSFESHKD 29590
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-----------AHTAEVN 277
+ V W +E++ S D++L +WD + + + HTA+++
Sbjct: 29591 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 29770
Query: 278 CLSFNPYSEFILATGSADKTVALWDL 303
S+NP +I+ + S D + +W +
Sbjct: 29771 DFSWNPNEPWIICSVSEDNIMQVWQM 29848
>gb|AY056814.1| Arabidopsis thaliana At2g16780/T24I21.19 mRNA, complete cds
Length = 1463
Score = 448 bits (1153), Expect = e-124
Identities = 224/423 (52%), Positives = 289/423 (67%), Gaps = 13/423 (3%)
Frame = +3
Query: 4 KEAAFDDAVEER---VINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
+E D+ EE + E++ +WKKNTPFLYDL+++H LEWPSLT W+P P D
Sbjct: 42 REIMADEGKEETGMGQVEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVAD 221
Query: 61 --FSIHRLVLGTHTSDE-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSG---- 113
F +H+L+LGTHTS Q+ L++A V P +A+ G G +
Sbjct: 222 SYFGVHKLILGTHTSGSAQDFLMVADVVTPTPNAE-------------PGIGGANQDPFI 362
Query: 114 -KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLR 172
K+EI +I +GEVNRAR MPQ P ++ KT +V +FDY KH +K S EC+PDLR
Sbjct: 363 PKVEIRQRIRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTS-ECDPDLR 539
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
L GH KEGYGLSW+P G+LLS S D ICLWD+SA P+ KV++A ++ GH + + D
Sbjct: 540 LVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQD-KVLNAMFVYEGHESAIAD 716
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
VSWH+ +E+LFGS +D +L+IWDTR+N H V H EVN LSFNP++E++LAT
Sbjct: 717 VSWHMKNENLFGSAGEDGRLVIWDTRTNQMQ---HQVKVHEREVNYLSFNPFNEWVLATA 887
Query: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE 352
S+D TVAL+DLR L LH SH+ E+FQV+W P++ET+LASSG DRRL VWDL+++GE
Sbjct: 888 SSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGE 1067
Query: 353 EQ--SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYN 410
EQ DAEDGPPELLF HGGH AKISDF+WN NEPWVI SV+EDN +QVWQMAE+IY
Sbjct: 1068EQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAESIYR 1247
Query: 411 DED 413
DE+
Sbjct: 1248DEE 1256
>ref|NM_127230.1| Arabidopsis thaliana chromosome 2 CHR2v12152001 genomic sequence
Length = 1427
Score = 448 bits (1153), Expect = e-124
Identities = 224/423 (52%), Positives = 289/423 (67%), Gaps = 13/423 (3%)
Frame = +3
Query: 4 KEAAFDDAVEER---VINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
+E D+ EE + E++ +WKKNTPFLYDL+++H LEWPSLT W+P P D
Sbjct: 21 REIMADEGKEETGMGQVEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVAD 200
Query: 61 --FSIHRLVLGTHTSDE-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSG---- 113
F +H+L+LGTHTS Q+ L++A V P +A+ G G +
Sbjct: 201 SYFGVHKLILGTHTSGSAQDFLMVADVVTPTPNAE-------------PGIGGANQDPFI 341
Query: 114 -KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLR 172
K+EI +I +GEVNRAR MPQ P ++ KT +V +FDY KH +K S EC+PDLR
Sbjct: 342 PKVEIRQRIRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTS-ECDPDLR 518
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
L GH KEGYGLSW+P G+LLS S D ICLWD+SA P+ KV++A ++ GH + + D
Sbjct: 519 LVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQD-KVLNAMFVYEGHESAIAD 695
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
VSWH+ +E+LFGS +D +L+IWDTR+N H V H EVN LSFNP++E++LAT
Sbjct: 696 VSWHMKNENLFGSAGEDGRLVIWDTRTNQMQ---HQVKVHEREVNYLSFNPFNEWVLATA 866
Query: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE 352
S+D TVAL+DLR L LH SH+ E+FQV+W P++ET+LASSG DRRL VWDL+++GE
Sbjct: 867 SSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGE 1046
Query: 353 EQ--SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYN 410
EQ DAEDGPPELLF HGGH AKISDF+WN NEPWVI SV+EDN +QVWQMAE+IY
Sbjct: 1047EQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAESIYR 1226
Query: 411 DED 413
DE+
Sbjct: 1227DEE 1235
>gb|AF016847.1|AF016847 Arabidopsis thaliana WD-40 repeat protein (MSI2) mRNA, complete cds
Length = 1425
Score = 447 bits (1151), Expect = e-124
Identities = 220/407 (54%), Positives = 283/407 (69%), Gaps = 10/407 (2%)
Frame = +3
Query: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD--FSIHRLVLGTHTSD 74
+ E++ +WKKNTPFLYDL+++H LEWPSLT W+P P D F +H+L+LGTHTS
Sbjct: 45 VEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGVHKLILGTHTSG 224
Query: 75 E-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSG-----KIEIEIKINHEGEVN 128
Q+ L++A V P +A+ G G + K+EI +I +GEVN
Sbjct: 225 SAQDFLMVADVVTPTPNAE-------------PGIGGANQDPFIPKVEIRQRIRVDGEVN 365
Query: 129 RARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPN 188
RAR MPQ P ++ KT +V +FDY KH +K S EC+PDLRL GH KEGYGLSW+P
Sbjct: 366 RARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTS-ECDPDLRLVGHDKEGYGLSWSPF 542
Query: 189 LSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 248
G+LLS S D ICLWD+SA P+ KV++A ++ GH + + DVSWH+ +E+LFGS +
Sbjct: 543 KEGYLLSGSQDQKICLWDVSATPQD-KVLNAMFVYEGHESAIADVSWHMKNENLFGSAGE 719
Query: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
D +L+IWDTR+N H V H EVN LSFNP++E++LAT S+D TVAL+DLR L
Sbjct: 720 DGRLVIWDTRTNQMQ---HQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNA 890
Query: 309 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ--SPEDAEDGPPEL 366
LH SH+ E+FQV+W P++ET+LASSG DRRL VWDL+++GEEQ DAEDGPPEL
Sbjct: 891 PLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPEL 1070
Query: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED 413
LF HGGH AKISDF+WN NEPWVI SV+EDN +QVWQMAE+IY DE+
Sbjct: 1071LFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAESIYRDEE 1211
>ref|NM_119671.1| Arabidopsis thaliana chromosome 4 CHR4v12152001 genomic sequence
Length = 1453
Score = 445 bits (1145), Expect = e-123
Identities = 218/427 (51%), Positives = 296/427 (69%), Gaps = 5/427 (1%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MA +E + +++ + EE+ IWK+NTPFLYDL+++H LEWPSLT W+P P KD
Sbjct: 4 MAAEEGKDEAGLDQ--VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKD 177
Query: 61 --FSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEI 117
F++H+L+LGTHTS Q+ L++A V +P DA+ D E + K+EI
Sbjct: 178 PYFAVHKLILGTHTSGGAQDFLMVADVVIPTPDAEPGLGGRDQEP--------IVPKVEI 333
Query: 118 EIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
+ KI +GEVNRAR MPQ P ++ KT S+V +FDY + KP S EC+PDLRL GH+
Sbjct: 334 KQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRLMGHE 510
Query: 178 KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHL 237
+EGYGL+W+ G+LLS S D ICLWD+SA KV++ ++ GH +++EDV+WH+
Sbjct: 511 QEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATD-KVLNPMHVYEGHQSIIEDVAWHM 687
Query: 238 LHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 297
+E++FGS DD +L+IWD R+N H V H E+N LSFNP++E++LAT S+D T
Sbjct: 688 KNENIFGSAGDDCQLVIWDLRTNQMQ---HQVKVHEREINYLSFNPFNEWVLATASSDST 858
Query: 298 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ--S 355
VAL+DLR L LH H+ E+FQV+W P++ET+LASSG DRRL VWD++++G+EQ
Sbjct: 859 VALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEI 1038
Query: 356 PEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPE 415
DAEDGPPELLF HGGH AKISDF+WN +EPWVI SV+EDN +QVWQMAE+IY ++D +
Sbjct: 1039ELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDED 1218
Query: 416 GSVDPEG 422
D EG
Sbjct: 1219EDDDDEG 1239
>gb|AF016848.1|AF016848 Arabidopsis thaliana WD-40 repeat protein (MSI3) mRNA, complete cds
Length = 1461
Score = 442 bits (1138), Expect = e-122
Identities = 216/427 (50%), Positives = 296/427 (68%), Gaps = 5/427 (1%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MA +E + +++ + EE+ IWK+NTPFLYDL+++H LEWPSLT W+P P KD
Sbjct: 4 MAAEEGKDEAGLDQ--VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKD 177
Query: 61 --FSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEI 117
F++H+L+LGTHTS Q+ L++A V +P DA+ D E + K+EI
Sbjct: 178 PYFAVHKLILGTHTSGGAQDFLMVADVVIPTPDAEPGLGGRDQEP--------IVPKVEI 333
Query: 118 EIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
+ KI +GEVNRAR MPQ P ++ KT S+V +FDY + KP S EC+PDLRL GH+
Sbjct: 334 KQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRLMGHE 510
Query: 178 KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHL 237
+EGYGL+W+ G+LLS S D ICLWD+SA KV++ ++ GH +++E+++WH+
Sbjct: 511 QEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATD-KVLNPMHVYEGHQSIIEELAWHM 687
Query: 238 LHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 297
+E++FGS DD +L+IWD R+N H V H E+N LSFNP++E++LAT S+D T
Sbjct: 688 KNENIFGSAGDDCQLVIWDLRTNQMQ---HQVKVHEREINYLSFNPFNEWVLATASSDST 858
Query: 298 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ--S 355
VAL+DLR L LH H+ E+FQV+W P++ET+LASSG DRRL VWD++++G+EQ
Sbjct: 859 VALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEI 1038
Query: 356 PEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPE 415
DAEDGPPELLF HGGH AKISDF+WN +EPWVI SV+EDN +QVWQMAE+IY ++D +
Sbjct: 1039ELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDED 1218
Query: 416 GSVDPEG 422
D EG
Sbjct: 1219EDDDDEG 1239
>emb|AL031324.2|SPCC1672 S.pombe chromosome III cosmid c1672
Length = 35999
Score = 358 bits (918), Expect = 8e-97
Identities = 187/380 (49%), Positives = 253/380 (66%), Gaps = 10/380 (2%)
Frame = +1
Query: 40 LEWP---SLTAQWLPDVTRPEGKDFSIHRLVLGTHTS-DEQNHLVIASVQLPN---DDAQ 92
L WP ++++ + D R G D+SI RL+LGTHTS ++QN+L IASVQLPN D +
Sbjct: 25942 LYWPLLQTISSVF*LDS*RIPGTDYSIQRLILGTHTSGNDQNYLQIASVQLPNFDEDTTE 26121
Query: 93 FDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVF 152
F S + GS + IEI KI H+G+VNRARYMPQ P IIAT + +F
Sbjct: 26122 FTPSTIRRAQAT----GSYT--IEISQKIPHDGDVNRARYMPQKPEIIATMGEGGNAYIF 26283
Query: 153 DYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDI---SA 209
D T H + +GE P L+GH EG+GL WNPNL G+L + ++D ICLWD+ S
Sbjct: 26284 DTTCHDALT--TGEALPQAVLKGHTAEGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSF 26457
Query: 210 VPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV 269
+ KV+ + HT +V DV +H HE+L SV+DD L I DTR N + +
Sbjct: 26458 TSSETKVISPIAKYHRHTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVI 26637
Query: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN 329
AH+ +N ++ NP+++++LAT SADKTVALWDLRN +LH+ E H+DE++ ++WSPH+
Sbjct: 26638 QAHSKAINAVAINPFNDYLLATASADKTVALWDLRNPYQRLHTLEGHEDEVYGLEWSPHD 26817
Query: 330 ETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWV 389
E ILASS TDRR+ +WDL KIGEEQ+PEDAEDG PELLF+HGGHT +IS+FSW PNE WV
Sbjct: 26818 EPILASSSTDRRVCIWDLEKIGEEQTPEDAEDGSPELLFMHGGHTNRISEFSWCPNERWV 26997
Query: 390 ICSVSEDNIMQVWQMAENIY 409
+ S+++DNI+Q+W + I+
Sbjct: 26998 VGSLADDNILQIWSPSRVIW 27057
Score = 70.9 bits (172), Expect = 2e-10
Identities = 28/37 (75%), Positives = 33/37 (88%)
Frame = +3
Query: 16 VINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPD 52
++ EYK+WK+N PFLYDLV+THALEWPSLT QWLPD
Sbjct: 25791 ILVSEYKLWKQNVPFLYDLVITHALEWPSLTIQWLPD 25901
>dbj|AB019228.1|AB019228 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCK7
Length = 87090
Score = 191 bits (484), Expect(2) = 2e-88
Identities = 106/217 (48%), Positives = 128/217 (58%), Gaps = 54/217 (24%)
Frame = +3
Query: 115 IEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLR 174
++I +INH+GEVNRARYMPQNP IIATKT +++V VFDY+KHPSKP G CNPDL+LR
Sbjct: 29688 VQIIQQINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLR 29867
Query: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVP----------------------- 211
GH EGYGLSW+ GHLLS SDD ICLWDI+A P
Sbjct: 29868 GHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKVMLWISIRF*F 30047
Query: 212 ------KKG------------KVVDAKT----------IFT---GHTAVVEDVSWHLLHE 240
K+G K++D + +F+ H VVEDV+WHL HE
Sbjct: 30048 CFVSSRKEGIAPT*RNQLHL*KLIDRYSGWFLCFPC**LFSELKAHEGVVEDVAWHLRHE 30227
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVN 277
LFGSV DDQ L+IWD RS + SKP SV AH+ EV+
Sbjct: 30228 YLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVS 30338
Score = 161 bits (407), Expect(2) = 2e-88
Identities = 72/124 (58%), Positives = 93/124 (74%), Gaps = 1/124 (0%)
Frame = +2
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
M E +EER+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD
Sbjct: 29240 MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKD 29419
Query: 61 FSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEI 119
+S+ +++LGTHTS+ E N+L++A VQLP DD + +A YD ++ EFGGFG +GK+ I
Sbjct: 29420 YSVQKMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVRFFI 29599
Query: 120 KINH 123
++H
Sbjct: 29600 FVSH 29611
Score = 120 bits (302), Expect(3) = 2e-47
Identities = 54/72 (75%), Positives = 62/72 (86%)
Frame = +1
Query: 349 KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
+I EEQ+ EDAEDGPPELLFIHGGHT+KISDFSWNP E WVI SV+EDNI+Q+WQMAENI
Sbjct: 30892 RIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 31071
Query: 409 YNDEDPEGSVDP 420
Y+DED +P
Sbjct: 31072 YHDEDDAPGEEP 31107
Score = 65.1 bits (157), Expect(3) = 2e-47
Identities = 28/48 (58%), Positives = 39/48 (80%)
Frame = +2
Query: 276 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 323
VNCL+FNP++E+++ATGS DKTV L+DLR L LH+F+SHK E + +
Sbjct: 30470 VNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHK*E*YAI 30613
Score = 50.1 bits (118), Expect(3) = 2e-47
Identities = 22/35 (62%), Positives = 27/35 (76%)
Frame = +3
Query: 317 KDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
++E+FQV W+P NETILAS RRL VWDLS+ G
Sbjct: 30705 REEVFQVGWNPKNETILASCCLGRRLMVWDLSRFG 30809
Score = 37.0 bits (84), Expect = 3.9
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Frame = +3
Query: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLR------------NLKLKLHSFESHKDE 319
H EVN + P + FI+AT + + V ++D N LKL H E
Sbjct: 29712 HDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRG---HSSE 29882
Query: 320 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 355
+ + WS + L S D ++ +WD++ + +S
Sbjct: 29883 GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKS 29990
>emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
Length = 226576
Score = 315 bits (807), Expect = 6e-84
Identities = 158/400 (39%), Positives = 237/400 (58%), Gaps = 2/400 (0%)
Frame = -2
Query: 9 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVL 68
+ +E++++NEEYKIWKKN P+LYDL+ +H LEWPSL+ QW PDV R E + RL+L
Sbjct: 96705 NQVLEQKIVNEEYKIWKKNVPYLYDLMFSHTLEWPSLSVQWFPDVRRDEEAGRTTQRLLL 96526
Query: 69 GTHTS-DEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEV 127
THTS E+ +++IA V+ P++ FD S + G+ +++I +I+ E
Sbjct: 96525 STHTSGSEEEYILIAKVEFPDE---FDESLNEEVGGDM--------RLKIIQRISIMDEA 96379
Query: 128 NRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNP 187
NR RY P ++A ++ D+ V+DYTKH S PD+ LRGH G+GLSWN
Sbjct: 96378 NRVRYNPSACNVLAVRSDLPDIHVYDYTKHLSHEKIP---RPDMVLRGHSAGGFGLSWNH 96208
Query: 188 NLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVA 247
G L + +C++D+S ++ + + H V D ++ + L S
Sbjct: 96207 LNPGELAGCGEGGEVCVFDVS---QESSSISPTVVLRRHETAVNDCAFSFFDKKLLSSAG 96037
Query: 248 DDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
D +++WDTRS + H+++ AHT+++ + F+P ++AT S D +V +WD R+L
Sbjct: 96036 DGGMVVLWDTRSEDCI---HAIEEAHTSDILSVRFSPLDGNVIATSSCDGSVKVWDRRSL 95866
Query: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
LH H ++ V+WSPHN+ +LAS TDRR+ VWDL + G E E +GPPE+
Sbjct: 95865 SQPLHILLGHSKDVVSVEWSPHNDKVLASGSTDRRVIVWDLGQAGAEVPEEYKAEGPPEM 95686
Query: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
F+HGGHT+ + D SWNP EP+ I SVSEDNI+Q+WQM +
Sbjct: 95685 KFLHGGHTSTVCDISWNPAEPFEIASVSEDNILQIWQMPQ 95566
>emb|Z97210.2|SPAC29A4 S.pombe chromosome I cosmid c29A4
Length = 44082
Score = 250 bits (638), Expect(2) = 3e-76
Identities = 139/358 (38%), Positives = 203/358 (55%), Gaps = 3/358 (0%)
Frame = -3
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK 120
++ ++ LG + L +AS+QLP + + + +G G S S ++ I
Sbjct: 8563 YTEQKMFLGVRADVGKYLLAVASIQLPYLNQTVPPT---TMEGASAGDES-SLRVNISNL 8396
Query: 121 INHEGEVNRARYMPQNP-CIIATKTPSSDVLVFDYTKHPSKPDPS-GECNPDLRLRGHQK 178
+H V A+ MPQ+ C+ +DVLVFD S S P RL H +
Sbjct: 8395 YSHPESVCSAKLMPQDDSCVATVGNYHNDVLVFDKESFESYSSASESPLKPKYRLTKHTQ 8216
Query: 179 EGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLL 238
+ WN G L+S S D T+ WD++A + K + H V DV +H
Sbjct: 8215 PCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFHYK 8036
Query: 239 HESLFGSVADDQKLMIWDTRSNNTS-KPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT 297
H+ L SV+ DQ L + D R + S KP+ SV AH+ ++ ++FNP+++FILAT S DKT
Sbjct: 8035 HQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATCSTDKT 7856
Query: 298 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPE 357
+ALWDLRNL +LH+ E H+D + ++ +SPH E ILAS+ DRR VWDLS+IGE+Q E
Sbjct: 7855 IALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLSRIGEDQPAE 7676
Query: 358 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPE 415
+A+DGPPELLF+HGGHT+ D W PN W + + +EDNI+Q+W + +I+ +E E
Sbjct: 7675 EAQDGPPELLFMHGGHTSCTIDMDWCPNYNWTMATAAEDNILQIWTPSRSIWGNEQLE 7502
Score = 61.6 bits (148), Expect(2) = 3e-76
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = -1
Query: 20 EYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPD 52
EYKIWKKN+PFLYDL++T ALEWP ++ QW P+
Sbjct: 8763 EYKIWKKNSPFLYDLIITRALEWPCMSLQWYPE 8665
>gb|U18795.1|SCE9669 Saccharomyces cerevisiae chromosome V cosmids 9669, 8334, 8199, and
lambda clone 1160
Length = 50849
Score = 283 bits (725), Expect = 2e-74
Identities = 146/409 (35%), Positives = 230/409 (55%), Gaps = 1/409 (0%)
Frame = +3
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
+A+ ++ ++ + ++EEY +WK N P +YD V L WPSLT QWLP +
Sbjct: 44670 IANYQSTMENQEKPLSVDEEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLPTPVQELDGG 44849
Query: 61 FSIHRLVLGTHTS-DEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEI 119
F L++GTHTS +E+N+L A + LP + + ++ + + I I
Sbjct: 44850 FIKQELIIGTHTSGEEENYLKFAEINLPKEILSNEDPQEEAGEEYQSSLPAPRSNIRITA 45029
Query: 120 KINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKE 179
K HE E+ RARYMPQ+P I+AT V ++ ++ L+ H+
Sbjct: 45030 KYEHEEEITRARYMPQDPNIVATINGQGTVFLYSRSEGLQST-----------LKFHKDN 45176
Query: 180 GYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLH 239
GY LS++ + G LLS SDDHT+ LW++ + K V +T H+ ++ D WH +
Sbjct: 45177 GYALSFSTLVKGRLLSGSDDHTVALWEVGSGGDPTKPV--RTWNDLHSDIINDNKWHNFN 45350
Query: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
+ LFG+V++D L I D R+NNT+ + N L+F+ +S +LA D V
Sbjct: 45351 KDLFGTVSEDSLLKINDVRANNTTIDTVKCPQ---PFNTLAFSHHSSNLLAAAGMDSYVY 45521
Query: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA 359
L+DLRN+K LH H+D + +++S H + ++ SSG+D RL +WDL +IG EQ+P+DA
Sbjct: 45522 LYDLRNMKEPLHHMSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDA 45701
Query: 360 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
EDG PEL+ +H GH + ++DF NP PW++ S E+NI+QVW+ + ++
Sbjct: 45702 EDGVPELIMVHAGHRSSVNDFDLNPQIPWLVASAEEENILQVWKCSHSL 45848
>gb|AF250047.1|AF250047 Zea mays WD-repeat protein RBAP1 (rbap1) mRNA, complete cds
Length = 1777
Score = 229 bits (583), Expect = 5e-58
Identities = 155/440 (35%), Positives = 218/440 (49%), Gaps = 43/440 (9%)
Frame = +1
Query: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE- 75
++E Y WK P LYD H L WPSL+ +W P + K+ RL L T
Sbjct: 337 VDERYAQWKSLIPVLYDWFANHNLVWPSLSCRWGPQFEKATYKNRQ--RLYLSEQTDGSV 510
Query: 76 QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
N LVIA+ ++ P A S ++ E + S ++ I H GEVNR R +
Sbjct: 511 PNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKYKTIVHPGEVNRIREL 666
Query: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSG--ECNPDLRLRGHQKEG-YGLSWNPNLS 190
PQN IIAT T S DVL++D P++ G E PDL L GH++ + L+ P
Sbjct: 667 PQNSKIIATHTDSPDVLIWDVEAQPNRHAVLGASESRPDLILTGHKENAEFALAMCP-AE 843
Query: 191 GHLLSASDDHTICLWDI------------------------SAVPKKGKVVDAKTIFTGH 226
++LS D ++ LW I +A K+ VD + IF GH
Sbjct: 844 PYVLSGGKDKSVVLWSIQDHISALGDSSSSPGASGSKQSIKTANEKESPKVDPRGIFHGH 1023
Query: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYS 285
+ VEDV + F SV DD L++WD R+ P+ V+ AH+ +V+C+ +NP
Sbjct: 1024DSTVEDVQFCPSSAQEFCSVGDDACLILWDARTGTA--PAVKVEKAHSGDVHCVDWNPLD 1197
Query: 286 EFILATGSADKTVALWDLRNLKL-----KLHSFESHKDEIFQVQWSPHNETILASSGTDR 340
+ TGSAD +V +WD RNL +H FE HK + VQWSP ++ SS D
Sbjct: 1198VNYILTGSADNSVRMWDRRNLGSGGAGSPIHKFEGHKAAVLCVQWSPDRASVFGSSAEDG 1377
Query: 341 RLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED---- 396
LNVWD K+G++++ + P L F H GH KI DF WN ++PW I SVS+D
Sbjct: 1378FLNVWDHEKVGKKKN----SNVPAGLFFQHAGHRDKIVDFHWNSSDPWTIVSVSDDGEST 1545
Query: 397 ---NIMQVWQMAENIYNDED 413
+Q+W+M++ IY ED
Sbjct: 1546GGGGTLQIWRMSDLIYRPED 1605
>gb|AF384037.1|AF384037 Zea mays nucleosome/chromatin assembly factor C (nfc102) mRNA,
complete cds
Length = 1808
Score = 229 bits (583), Expect = 5e-58
Identities = 155/440 (35%), Positives = 218/440 (49%), Gaps = 43/440 (9%)
Frame = +3
Query: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE- 75
++E Y WK P LYD H L WPSL+ +W P + K+ RL L T
Sbjct: 249 VDERYAQWKSLIPVLYDWFANHNLVWPSLSCRWGPQFEKATYKNRQ--RLYLSEQTDGSV 422
Query: 76 QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
N LVIA+ ++ P A S ++ E + S ++ I H GEVNR R +
Sbjct: 423 PNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKYKTIVHPGEVNRIREL 578
Query: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSG--ECNPDLRLRGHQKEG-YGLSWNPNLS 190
PQN IIAT T S DVL++D P++ G E PDL L GH++ + L+ P
Sbjct: 579 PQNSKIIATHTDSPDVLIWDVEAQPNRHAVLGASESRPDLILTGHKENAEFALAMCP-AE 755
Query: 191 GHLLSASDDHTICLWDI------------------------SAVPKKGKVVDAKTIFTGH 226
++LS D ++ LW I +A K+ VD + IF GH
Sbjct: 756 PYVLSGGKDKSVVLWSIQDHISALGDSSSSPGASGSKQSIKTANEKESPKVDPRGIFHGH 935
Query: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYS 285
+ VEDV + F SV DD L++WD R+ P+ V+ AH+ +V+C+ +NP
Sbjct: 936 DSTVEDVQFCPSSAQEFCSVGDDACLILWDARTGTA--PAVKVEKAHSGDVHCVDWNPLD 1109
Query: 286 EFILATGSADKTVALWDLRNLKL-----KLHSFESHKDEIFQVQWSPHNETILASSGTDR 340
+ TGSAD +V +WD RNL +H FE HK + VQWSP ++ SS D
Sbjct: 1110VNYILTGSADNSVRMWDRRNLGSGGAGSPIHKFEGHKAAVLCVQWSPDRASVFGSSAEDG 1289
Query: 341 RLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED---- 396
LNVWD K+G++++ + P L F H GH KI DF WN ++PW I SVS+D
Sbjct: 1290FLNVWDHEKVGKKKN----SNVPAGLFFQHAGHRDKIVDFHWNSSDPWTIVSVSDDGEST 1457
Query: 397 ---NIMQVWQMAENIYNDED 413
+Q+W+M++ IY ED
Sbjct: 1458GGGGTLQIWRMSDLIYRPED 1517
>gb|AF028711.1|AF028711 Arabidopsis thaliana WD-40 repeat protein MSI4 (MSI4) mRNA,
complete cds
Length = 1815
Score = 223 bits (567), Expect = 4e-56
Identities = 146/438 (33%), Positives = 218/438 (49%), Gaps = 41/438 (9%)
Frame = +1
Query: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE- 75
++E+Y WK P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 181 VDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSV 354
Query: 76 QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
N LVIA+ ++ P A S ++ E + S ++ I H GEVNR R +
Sbjct: 355 PNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKYKTIIHPGEVNRIREL 510
Query: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNPNLS 190
PQN I+AT T S DVL++D P++ G N PDL L GHQ + L+ P
Sbjct: 511 PQNSKIVATHTDSPDVLIWDVETQPNRHPVLGAANSRPDLILTGHQDNAEFALAMCPT-E 687
Query: 191 GHLLSASDDHTICLWDI---------------SAVPKKGK--------VVDAKTIFTGHT 227
+LS D ++ LW I S + + G+ V + ++ GH
Sbjct: 688 PFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQPGEGTDKNESPTVGPRGVYHGHE 867
Query: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
VEDV++ F SV DD L++WD R+ T+ + AH A+++C+ +NP+ +
Sbjct: 868 DTVEDVAFSPTSAQEFCSVGDDSCLILWDART-GTNPVTKVEKAHDADLHCVDWNPHDDN 1044
Query: 288 ILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
++ TGSAD TV L+D R L ++ FE HK + VQWSP ++ SS D L
Sbjct: 1045LILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLL 1224
Query: 343 NVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED------ 396
N+WD ++ ++ + A P L F H GH K+ DF WN ++PW I SVS+D
Sbjct: 1225NIWDYDRVSKKS--DRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCETTGG 1398
Query: 397 -NIMQVWQMAENIYNDED 413
+Q+W+M++ IY E+
Sbjct: 1399GGTLQIWRMSDLIYRPEE 1452
>gb|AY057655.1| Arabidopsis thaliana At2g19520/F3P11.12 mRNA, complete cds
Length = 1810
Score = 222 bits (566), Expect = 5e-56
Identities = 146/438 (33%), Positives = 218/438 (49%), Gaps = 41/438 (9%)
Frame = +1
Query: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE- 75
++E+Y WK P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 238 VDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSV 411
Query: 76 QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
N LVIA+ ++ P A S ++ E + S ++ I H GEVNR R +
Sbjct: 412 PNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKYKTIIHPGEVNRIREL 567
Query: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNPNLS 190
PQN I+AT T S DVL++D P++ G N PDL L GHQ + L+ P
Sbjct: 568 PQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCPT-E 744
Query: 191 GHLLSASDDHTICLWDI---------------SAVPKKGKVVDA--------KTIFTGHT 227
+LS D ++ LW I S + + G+ D + ++ GH
Sbjct: 745 PFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQTGEGTDKNESPTVGPRGVYHGHE 924
Query: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
VEDV++ F SV DD L++WD R+ T+ + AH A+++C+ +NP+ +
Sbjct: 925 DTVEDVAFSPTSAQEFCSVGDDSCLILWDARTG-TNPVTKVEKAHDADLHCVDWNPHDDN 1101
Query: 288 ILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
++ TGSAD TV L+D R L ++ FE HK + VQWSP ++ SS D L
Sbjct: 1102LILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLL 1281
Query: 343 NVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED------ 396
N+WD ++ ++ + A P L F H GH K+ DF WN ++PW I SVS+D
Sbjct: 1282NIWDYDRVSKKS--DRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCETTGG 1455
Query: 397 -NIMQVWQMAENIYNDED 413
+Q+W+M++ IY E+
Sbjct: 1456GGTLQIWRMSDLIYRPEE 1509
>ref|NM_127510.1| Arabidopsis thaliana chromosome 2 CHR2v12152001 genomic sequence
Length = 1790
Score = 222 bits (566), Expect = 5e-56
Identities = 146/438 (33%), Positives = 218/438 (49%), Gaps = 41/438 (9%)
Frame = +1
Query: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE- 75
++E+Y WK P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 181 VDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSV 354
Query: 76 QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
N LVIA+ ++ P A S ++ E + S ++ I H GEVNR R +
Sbjct: 355 PNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKYKTIIHPGEVNRIREL 510
Query: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNPNLS 190
PQN I+AT T S DVL++D P++ G N PDL L GHQ + L+ P
Sbjct: 511 PQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCPT-E 687
Query: 191 GHLLSASDDHTICLWDI---------------SAVPKKGKVVDA--------KTIFTGHT 227
+LS D ++ LW I S + + G+ D + ++ GH
Sbjct: 688 PFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQTGEGTDKNESPTVGPRGVYHGHE 867
Query: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
VEDV++ F SV DD L++WD R+ T+ + AH A+++C+ +NP+ +
Sbjct: 868 DTVEDVAFSPTSAQEFCSVGDDSCLILWDARTG-TNPVTKVEKAHDADLHCVDWNPHDDN 1044
Query: 288 ILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
++ TGSAD TV L+D R L ++ FE HK + VQWSP ++ SS D L
Sbjct: 1045LILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLL 1224
Query: 343 NVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED------ 396
N+WD ++ ++ + A P L F H GH K+ DF WN ++PW I SVS+D
Sbjct: 1225NIWDYDRVSKKS--DRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCETTGG 1398
Query: 397 -NIMQVWQMAENIYNDED 413
+Q+W+M++ IY E+
Sbjct: 1399GGTLQIWRMSDLIYRPEE 1452
>gb|AY059799.1| Arabidopsis thaliana putative WD-40 repeat protein, MSI4
(At2g19520; F3P11.12) mRNA, complete cds
Length = 1776
Score = 222 bits (566), Expect = 5e-56
Identities = 146/438 (33%), Positives = 218/438 (49%), Gaps = 41/438 (9%)
Frame = +1
Query: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE- 75
++E+Y WK P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 214 VDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSV 387
Query: 76 QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
N LVIA+ ++ P A S ++ E + S ++ I H GEVNR R +
Sbjct: 388 PNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKYKTIIHPGEVNRIREL 543
Query: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNPNLS 190
PQN I+AT T S DVL++D P++ G N PDL L GHQ + L+ P
Sbjct: 544 PQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCPT-E 720
Query: 191 GHLLSASDDHTICLWDI---------------SAVPKKGKVVDA--------KTIFTGHT 227
+LS D ++ LW I S + + G+ D + ++ GH
Sbjct: 721 PFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQTGEGTDKNESPTVGPRGVYHGHE 900
Query: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
VEDV++ F SV DD L++WD R+ T+ + AH A+++C+ +NP+ +
Sbjct: 901 DTVEDVAFSPTSAQEFCSVGDDSCLILWDARTG-TNPVTKVEKAHDADLHCVDWNPHDDN 1077
Query: 288 ILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
++ TGSAD TV L+D R L ++ FE HK + VQWSP ++ SS D L
Sbjct: 1078LILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLL 1257
Query: 343 NVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED------ 396
N+WD ++ ++ + A P L F H GH K+ DF WN ++PW I SVS+D
Sbjct: 1258NIWDYDRVSKKS--DRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCETTGG 1431
Query: 397 -NIMQVWQMAENIYNDED 413
+Q+W+M++ IY E+
Sbjct: 1432GGTLQIWRMSDLIYRPEE 1485
>emb|AL114645.1|CNS01BST Botrytis cinerea strain T4 cDNA library under conditions of
nitrogen deprivation
Length = 720
Score = 221 bits (564), Expect = 9e-56
Identities = 106/209 (50%), Positives = 149/209 (70%), Gaps = 7/209 (3%)
Frame = +1
Query: 9 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVL 68
++ +E+++INEEYK WKKN+PFLYD++++ ALEWP+LT QW PDV P GK++S+HRL++
Sbjct: 97 NEDMEQKIINEEYKTWKKNSPFLYDMILSTALEWPTLTTQWFPDVKEPAGKNYSVHRLLI 276
Query: 69 GTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSG------KIEIEIKI 121
GTHTS+ QN+L IA+V+LP + + YD ++ E GG+G S K+ IE KI
Sbjct: 277 GTHTSNGAQNYLQIANVELPKNVTP-NHVDYDEDREEIGGYGKSSSGEQAAIKMTIEQKI 453
Query: 122 NHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY 181
+H GEVN+ARY PQNP IIAT VL+FD TKH S P G +P + L GH+KEG+
Sbjct: 454 DHPGEVNKARYQPQNPNIIATMCVDGRVLIFDRTKHSSL--PKGVVSPQIELIGHKKEGF 627
Query: 182 GLSWNPNLSGHLLSASDDHTICLWDISAV 210
GL WNP+++G L + S+D T+ LWD++ +
Sbjct: 628 GLGWNPHVAGELATGSEDKTVRLWDLNTL 714
Score = 42.4 bits (98), Expect = 0.093
Identities = 28/88 (31%), Positives = 44/88 (49%), Gaps = 6/88 (6%)
Frame = +1
Query: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD------AHTAEVNCL 279
H V + + ++ ++ D +++I+D R+ ++S P V H E L
Sbjct: 457 HPGEVNKARYQPQNPNIIATMCVDGRVLIFD-RTKHSSLPKGVVSPQIELIGHKKEGFGL 633
Query: 280 SFNPYSEFILATGSADKTVALWDLRNLK 307
+NP+ LATGS DKTV LWDL L+
Sbjct: 634 GWNPHVAGELATGSEDKTVRLWDLNTLQ 717
Score = 40.4 bits (93), Expect = 0.35
Identities = 24/86 (27%), Positives = 39/86 (44%), Gaps = 7/86 (8%)
Frame = +1
Query: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDL-------RNLKLKLHSFESHKDEIFQVQ 324
H EVN + P + I+AT D V ++D + + HK E F +
Sbjct: 457 HPGEVNKARYQPQNPNIIATMCVDGRVLIFDRTKHSSLPKGVVSPQIELIGHKKEGFGLG 636
Query: 325 WSPHNETILASSGTDRRLNVWDLSKI 350
W+PH LA+ D+ + +WDL+ +
Sbjct: 637 WNPHVAGELATGSEDKTVRLWDLNTL 714
Score = 40.4 bits (93), Expect = 0.35
Identities = 23/99 (23%), Positives = 46/99 (46%)
Frame = +1
Query: 306 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPE 365
+K+ + H E+ + ++ P N I+A+ D R+ ++D +K P+ E
Sbjct: 427 IKMTIEQKIDHPGEVNKARYQPQNPNIIATMCVDGRVLIFDRTK--HSSLPKGVVSPQIE 600
Query: 366 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
L+ GH + WNP+ + + SED +++W +
Sbjct: 601 LI----GHKKEGFGLGWNPHVAGELATGSEDKTVRLWDL 705
>emb|Y18517.1|SLA18517 Silene latifolia mRNA for Y1 protein
Length = 1814
Score = 220 bits (560), Expect = 3e-55
Identities = 153/484 (31%), Positives = 226/484 (46%), Gaps = 46/484 (9%)
Frame = +3
Query: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE- 75
++E+Y WK P LYD + H L WPSL+ +W P + K+ RL L T
Sbjct: 114 VDEKYSQWKSLVPILYDWLANHNLVWPSLSCRWGPLIEEATYKNRQ--RLYLSEQTDGSV 287
Query: 76 QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
N LVIA+V++ P A S ++ E + S + I H GEVNR R +
Sbjct: 288 PNTLVIANVEVVKPRVAAAEHISKFNEE--------ARSPFVRKFKTIIHPGEVNRIREL 443
Query: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGE--CNPDLRLRGHQKEGYGLSWNPNLSG 191
PQN I+AT T S DV ++D P++P G PDL L GHQ +
Sbjct: 444 PQNSNIVATHTDSPDVYIWDLESQPNRPANWGTPASRPDLTLTGHQDNAEFALAMCSSEP 623
Query: 192 HLLSASDDHTICLWDI--------------------SAVPKKGK------VVDAKTIFTG 225
+LS D ++ LW I S + K G + + I+ G
Sbjct: 624 LVLSGGKDKSVVLWSIHDHISTLATEPGSAKSPNSGSNIKKAGNGNSDNPSIGPRGIYLG 803
Query: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPY 284
H VEDV + F SV DD L++WD R+ T P V+ AH A+++C+ +NP+
Sbjct: 804 HEDTVEDVQFCPSSAQQFCSVGDDSCLILWDARAGLT--PVTKVEKAHNADLHCVDWNPH 977
Query: 285 SEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTD 339
E ++ TGSAD ++ L+D RNL +H F+ H + VQWSPHN +I S+ D
Sbjct: 978 DENLILTGSADSSINLFDRRNLTASGVGSPVHKFQGHDAPVLCVQWSPHNRSIFGSAAED 1157
Query: 340 RRLNVWDLSKIG--EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED- 396
LN+WD K+ E +S + P L F H GH K+ DF WN +PW + SVS+D
Sbjct: 1158GLLNIWDYEKVSKMETESGGKKSNHPAGLFFRHAGHRDKVVDFHWNSIDPWTLVSVSDDC 1337
Query: 397 ------NIMQVWQMAENIYNDEDPEGSVDPEGQGSRRVCTCDPRLSLFSSEPRDGFNIGL 450
+Q+W++ + +Y E+ + + + C+ P + S + GF +
Sbjct: 1338SSSAGGGTLQIWRIIDLLYGPEEEVLAELDKFRSHVAACSPTPTKDVNHSA*QQGFEALV 1517
Query: 451 RHRL 454
H +
Sbjct: 1518THSI 1529
>emb|Y18519.1|SLA18519 Silene latifolia mRNA for X1 protein
Length = 1763
Score = 220 bits (560), Expect = 3e-55
Identities = 153/482 (31%), Positives = 225/482 (45%), Gaps = 46/482 (9%)
Frame = +2
Query: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE- 75
++E+Y WK P LYD + H L WPSL+ +W P + K+ RL L T
Sbjct: 44 VDEKYSQWKSLVPILYDWLANHNLVWPSLSCRWGPLIEEATYKNRQ--RLYLSEQTDGSV 217
Query: 76 QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
N LVIA+V++ P A S ++ E + S + I H GEVNR R +
Sbjct: 218 PNTLVIANVEVVKPRVAAAEHISKFNEE--------ARSPFVRKFKTIIHPGEVNRIREL 373
Query: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGE--CNPDLRLRGHQKEGYGLSWNPNLSG 191
PQN I+AT T S DV ++D P++P G PDL L GHQ +
Sbjct: 374 PQNSNIVATHTDSPDVYIWDLESQPNRPANLGTPASRPDLTLTGHQDNAEFALAMCSSEP 553
Query: 192 HLLSASDDHTICLWDI--------------------SAVPKKGK------VVDAKTIFTG 225
+LS D ++ LW I S + K G + + I+ G
Sbjct: 554 LVLSGGKDKSVVLWSIHDHISTLATEPGSAKSPNSGSNIKKAGNGNSDNPSIGPRGIYLG 733
Query: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPY 284
H VEDV + F SV DD L++WD R+ T P V+ AH A+++C+ +NP+
Sbjct: 734 HEDTVEDVQFCPSSAQQFCSVGDDSCLILWDARAGLT--PVTKVEKAHNADLHCVDWNPH 907
Query: 285 SEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTD 339
E ++ TGSAD ++ L+D RNL +H F+ H + VQWSPHN +I S+ D
Sbjct: 908 DENLILTGSADSSINLFDRRNLTASGVGSPVHKFQGHDAPVLCVQWSPHNRSIFGSAAED 1087
Query: 340 RRLNVWDLSKIG--EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED- 396
LN+WD K+ E +S + P L F H GH K+ DF WN +PW + SVS+D
Sbjct: 1088GLLNIWDYEKVSKMETESGGKKSNHPAGLFFRHAGHRDKVVDFHWNSIDPWTLVSVSDDC 1267
Query: 397 ------NIMQVWQMAENIYNDEDPEGSVDPEGQGSRRVCTCDPRLSLFSSEPRDGFNIGL 450
+Q+W++ + +Y E+ + + + C+ P + S + GF +
Sbjct: 1268SSSAGGGTLQIWRIIDLLYRPEEEVLAELDKFRSHVAACSPTPTKDVNHSA*QQGFEALV 1447
Query: 451 RH 452
H
Sbjct: 1448TH 1453
>ref|NM_119118.1| Arabidopsis thaliana chromosome 4 CHR4v12152001 genomic sequence
Length = 1491
Score = 216 bits (549), Expect = 5e-54
Identities = 146/442 (33%), Positives = 216/442 (48%), Gaps = 41/442 (9%)
Frame = +1
Query: 13 EERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHT 72
++ +++ Y WK P LYD + H L WPSL+ +W P + + K RL L T
Sbjct: 148 QKATVDDTYSQWKTLLPILYDSFVNHTLVWPSLSCRWGPQLEQAGSKT---QRLYLSEQT 318
Query: 73 SDE-QNHLVIASVQLPNDDA-QFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRA 130
+ N LVIA+ + N F +EK S ++ I H GEVNR
Sbjct: 319 NGSVPNTLVIANCETVNRQVISFSLPKLLNEKAH-------SPFVKKYKTIIHPGEVNRI 477
Query: 131 RYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSG--ECNPDLRLRGHQKEG-YGLSWNP 187
R +PQN I+AT T S D+L+++ P + G + PDL L GHQ + + L+ P
Sbjct: 478 RELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDAEFALAMCP 657
Query: 188 NLSGHLLSASDDHTICLWDI----------SAVPKK-------------GKVVDAKTIFT 224
+LS D ++ LW+I S P G V + I+
Sbjct: 658 T-EPFVLSGGKDKSVILWNIQDHITMAGSDSKSPGSSFKQTGEGSDKTGGPSVGPRGIYN 834
Query: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNP 283
GH VEDV++ F SV DD LM+WD R+ + P+ V+ AH A+++C+ +NP
Sbjct: 835 GHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTS--PAMKVEKAHDADLHCVDWNP 1008
Query: 284 YSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGT 338
+ ++ TGSAD TV ++D RNL ++ FE H+ + VQWSP ++ SS
Sbjct: 1009HDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAE 1188
Query: 339 DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED-- 396
D LN+WD ++G++ E A P L F H GH K+ DF W+ PW I SVS++
Sbjct: 1189DGLLNIWDCDRVGKKS--ERATKTPDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVSDNCE 1362
Query: 397 -----NIMQVWQMAENIYNDED 413
+Q+W+M++ IY ED
Sbjct: 1363SIGGGGTLQIWRMSDLIYRPED 1428
>emb|Z21487.1|SCCHRIIFG S.cerevisiae RIM, MSI1, PGI, and ribosomal protein L21 genes
Length = 30981
Score = 194 bits (493), Expect = 1e-47
Identities = 124/431 (28%), Positives = 204/431 (46%), Gaps = 27/431 (6%)
Frame = -2
Query: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD-- 74
+ E Y WKKNT LYD + T++ +WPSLT Q+ PD+ + HR++L + TS
Sbjct: 5054 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDE----HRILLSSFTSSQK 4887
Query: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSV---SGKIEIEIKINH-EGEVNR 129
E + I+ + +++D ++ EF S S + +I I GE NR
Sbjct: 4886 PEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNR 4707
Query: 130 ARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNP--DLRLRGHQ---------- 177
ARY+PQNP IIA + + +FD TKH S + + + +L G
Sbjct: 4706 ARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMD 4527
Query: 178 ------KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTI-FTGHTAVV 230
E L+WN LLS+ + + +WDI + ++D + V
Sbjct: 4526 TSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINSDGTAV 4347
Query: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
DV+W H+SLF + + + + D R+ S+ + H VN FN + ILA
Sbjct: 4346 NDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNR-EKHDGGVNSCRFNYKNSLILA 4170
Query: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT-DRRLNVWDLSK 349
+ ++ + LWD+RN+ + H + ++WSP+ +T+LA++G D + +WD S
Sbjct: 4169 SADSNGRLNLWDIRNMNKSPIATMEHGTSVSTLEWSPNFDTVLATAGQEDGLVKLWDTSC 3990
Query: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
E +F HGGH ++D SW+ ++PW++CSV+ DN + +W+ A N+
Sbjct: 3989 --------------EETIFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHIWKPAGNLV 3852
Query: 410 NDEDPEGSVDP 420
P+ S+ P
Sbjct: 3851 GHS*PKRSLKP 3819
Score = 65.9 bits (159), Expect = 8e-09
Identities = 51/175 (29%), Positives = 82/175 (46%)
Frame = -3
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
L GH Y S++P+ + +LLS S+D T+ LW + A + GH V D
Sbjct: 10189 LVGHSGTVYSTSFSPD-NKYLLSGSEDKTVRLWSMDTHT-------ALVSYKGHNHPVWD 10034
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
VS+ L F + + DQ +W S + P H +V+C+SF+P ++ TG
Sbjct: 10033 VSFSPLGH-YFATASHDQTARLW---SCDHIYPLRIFAGHLNDVDCVSFHPNGCYVF-TG 9869
Query: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
S+DKT +WD+ + + F H + + P L++ D +NVWD+
Sbjct: 9868 SSDKTCRMWDV-STGDSVRLFLGHTAPVISIAVCPDGRW-LSTGSEDGIINVWDI 9710
>emb|Z98944.1|SPAC25H1 S.pombe chromosome I cosmid c25H1
Length = 14220
Score = 194 bits (493), Expect = 1e-47
Identities = 135/407 (33%), Positives = 208/407 (50%), Gaps = 17/407 (4%)
Frame = +1
Query: 14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTS 73
E I+E++ WKKN+ LY+L++T L WPSL+ QWL + K +RL+LGTH +
Sbjct: 7156 ENQISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAMESITEKAVLKNRLLLGTHAA 7335
Query: 74 DEQ-NHLVIASVQLP--NDDAQFDASHYDSEKGEFGGFGSV-SGKIEIEIKINHEGEVNR 129
+ N L +A + LP N HY+ + GE GG+ S K +I +I H G+VNR
Sbjct: 7336 EGMPNFLQLADLDLPDFNQTILDPVKHYNEDTGELGGYSMQHSCKFQISQRILHNGDVNR 7515
Query: 130 ARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNL 189
R+MPQNP IIAT + + +FD TK+ S P + E P++ L GH+KEG+GLSWN
Sbjct: 7516 VRHMPQNPNIIATMSSCGNAYIFDRTKYTSMP--AEEFLPNISLIGHKKEGFGLSWNRQQ 7689
Query: 190 SGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADD 249
+ L++A++D I WD++ + + + F + V DV +H H +L+ +V D+
Sbjct: 7690 NCRLVTAANDSKILEWDLNNFSRDTRCLTPVKDFHYDDSPVNDVEYHPHHTNLYIAVNDN 7869
Query: 250 QKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL-KL 308
I D R T S +V A + + + NP + A GS ++ + LWDLRNL K
Sbjct: 7870 GIAFICDNRLQQTC--SKTVKA-SNPLFSVRHNPSIATLFALGS-EQDLQLWDLRNLNKS 8037
Query: 309 KLHSFESHKDEIFQV-----------QWS-PHNETILASSGTDRRLNVWDLSKIGEEQSP 356
++ E D +V WS H+ I+ S VW+ +K
Sbjct: 8038 VFNTSEDLSDNRLKVPSRLTLGGTSLSWSWRHSGRIV--SACQEYCYVWNFNKAN----- 8196
Query: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
L F+H GH +++ ++P E I SV++DN + +W+
Sbjct: 8197 --------PLEFVHAGHKGTVNEVDFDPFEAQCIASVADDNELHIWK 8313
Score = 42.4 bits (98), Expect = 0.093
Identities = 45/182 (24%), Positives = 75/182 (40%), Gaps = 8/182 (4%)
Frame = -3
Query: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 331
H V +S NP + A+G D +WD+ + ++ HKD I + WS + T
Sbjct: 13378 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGE-QICQLTGHKDSIVAIDWS-FDGT 13205
Query: 332 ILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTA-KISDFSWNPNEPWVI 390
+A+ G D ++ +W S G E FI T +I SW+P ++
Sbjct: 13204 YIATGGMDSQVRLWK-SSTGFE--------------FITAFETVDEIVWLSWHPKGLFLA 13070
Query: 391 CSVSEDNIMQVW-----QMAENIYNDEDP--EGSVDPEGQGSRRVCTCDPRLSLFSSEPR 443
++ +I +W ++ + +Y P G P G G +R+ T D +L P
Sbjct: 13069 AGCNDGSIW-MWSLPSGKVVQVMYGHTAPVNAGKFIPPGVG-KRLATVDDSGTLIVWNPA 12896
Query: 444 DG 445
G
Sbjct: 12895 TG 12890
>emb|Z36064.1|SCYBR195C S.cerevisiae chromosome II reading frame ORF YBR195c
Length = 1832
Score = 194 bits (493), Expect = 1e-47
Identities = 124/431 (28%), Positives = 204/431 (46%), Gaps = 27/431 (6%)
Frame = -3
Query: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD-- 74
+ E Y WKKNT LYD + T++ +WPSLT Q+ PD+ + HR++L + TS
Sbjct: 1422 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDE----HRILLSSFTSSQK 1255
Query: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSV---SGKIEIEIKINH-EGEVNR 129
E + I+ + +++D ++ EF S S + +I I GE NR
Sbjct: 1254 PEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNR 1075
Query: 130 ARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNP--DLRLRGHQ---------- 177
ARY+PQNP IIA + + +FD TKH S + + + +L G
Sbjct: 1074 ARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMD 895
Query: 178 ------KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTI-FTGHTAVV 230
E L+WN LLS+ + + +WDI + ++D + V
Sbjct: 894 TSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINSDGTAV 715
Query: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
DV+W H+SLF + + + + D R+ S+ + H VN FN + ILA
Sbjct: 714 NDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNR-EKHDGGVNSCRFNYKNSLILA 538
Query: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT-DRRLNVWDLSK 349
+ ++ + LWD+RN+ + H + ++WSP+ +T+LA++G D + +WD S
Sbjct: 537 SADSNGRLNLWDIRNMNKSPIATMEHGTSVSTLEWSPNFDTVLATAGQEDGLVKLWDTSC 358
Query: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
E +F HGGH ++D SW+ ++PW++CSV+ DN + +W+ A N+
Sbjct: 357 --------------EETIFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHIWKPAGNLV 220
Query: 410 NDEDPEGSVDP 420
P+ S+ P
Sbjct: 219 GHS*PKRSLKP 187
>gb|M27300.1|YSCMSI1 S.cerevisiae MSI1 gene, complete cds
Length = 1574
Score = 194 bits (493), Expect = 1e-47
Identities = 124/431 (28%), Positives = 204/431 (46%), Gaps = 27/431 (6%)
Frame = +1
Query: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD-- 74
+ E Y WKKNT LYD + T++ +WPSLT Q+ PD+ + HR++L + TS
Sbjct: 178 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDE----HRILLSSFTSSQK 345
Query: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSV---SGKIEIEIKINH-EGEVNR 129
E + I+ + +++D ++ EF S S + +I I GE NR
Sbjct: 346 PEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNR 525
Query: 130 ARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNP--DLRLRGHQ---------- 177
ARY+PQNP IIA + + +FD TKH S + + + +L G
Sbjct: 526 ARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMD 705
Query: 178 ------KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTI-FTGHTAVV 230
E L+WN LLS+ + + +WDI + ++D + V
Sbjct: 706 TSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINSDGTAV 885
Query: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
DV+W H+SLF + + + + D R+ S+ + H VN FN + ILA
Sbjct: 886 NDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNR-EKHDGGVNSCRFNYKNSLILA 1062
Query: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT-DRRLNVWDLSK 349
+ ++ + LWD+RN+ + H + ++WSP+ +T+LA++G D + +WD S
Sbjct: 1063SADSNGRLNLWDIRNMNKSPIATMEHGTSVSTLEWSPNFDTVLATAGQEDGLVKLWDTSC 1242
Query: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
E +F HGGH ++D SW+ ++PW++CSV+ DN + +W+ A N+
Sbjct: 1243--------------EETIFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHIWKPAGNLV 1380
Query: 410 NDEDPEGSVDP 420
P+ S+ P
Sbjct: 1381GHS*PKRSLKP 1413
>emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 82
Length = 195165
Score = 139 bits (351), Expect(2) = 9e-41
Identities = 69/136 (50%), Positives = 89/136 (64%), Gaps = 29/136 (21%)
Frame = -2
Query: 316 HKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK-------------------------- 349
++ E+FQV+W P++ET+LASSG DRRL VWD+++
Sbjct: 137978 YRGEVFQVEWDPNHETVLASSGEDRRLMVWDINRYHSRYFPFHLIQN*NWIS*FQFGGSF 137799
Query: 350 -IGEEQSPE--DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
+G+EQ DAEDGPPELLF HGGH AKISDF+WN +EPWVI SV+EDN +QVWQMAE
Sbjct: 137798 RVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAE 137619
Query: 407 NIYNDEDPEGSVDPEG 422
+IY ++D + D EG
Sbjct: 137618 SIYREDDEDEDDDDEG 137571
Score = 114 bits (286), Expect(2) = 3e-35
Identities = 53/96 (55%), Positives = 69/96 (71%)
Frame = -2
Query: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRL 173
++EI+ KI +GEVNRAR MPQ P ++ KT S+V +FDY + KP S EC+PDLRL
Sbjct: 138947 QVEIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRL 138771
Query: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISA 209
GH++EGYGL+W+ G+LLS S D ICLWD+SA
Sbjct: 138770 MGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSA 138663
Score = 95.5 bits (236), Expect = 9e-18
Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 3/104 (2%)
Frame = -3
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MA +E + +++ + EE+ IWK+NTPFLYDL+++H LEWPSLT W+P P KD
Sbjct: 139531 MAAEEGKDEAGLDQ--VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKD 139358
Query: 61 --FSIHRLVLGTHTS-DEQNHLVIASVQLPNDDAQFDASHYDSE 101
F++H+L+LGTHTS Q+ L++A V +P DA+ D E
Sbjct: 139357 PYFAVHKLILGTHTSGGAQDFLMVADVVIPTPDAEPGLGGRDQE 139226
Score = 60.1 bits (144), Expect(2) = 3e-35
Identities = 27/61 (44%), Positives = 41/61 (66%)
Frame = -1
Query: 220 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCL 279
+T F GH +++EDV+WH+ +E++FGS DD +L+IWD R+N + H V H EV +
Sbjct: 138543 ETWF*GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN---QMQHQVKVHEREV*TI 138373
Query: 280 S 280
S
Sbjct: 138372 S 138370
Score = 53.5 bits (127), Expect(2) = 9e-41
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = -3
Query: 264 KPS--HSVDAHTA-EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK 317
KPS HS + ++N LSFNP++E++LAT S+D TVAL+DLR L LH H+
Sbjct: 138232 KPSSDHSTTLSSVLQINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHE 138062
Score = 43.5 bits (101), Expect = 0.042
Identities = 24/64 (37%), Positives = 38/64 (58%), Gaps = 2/64 (3%)
Frame = -3
Query: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLKLKLHSFESHKDEIFQVQWS 326
++ H VN +SFN + +L +GS D+ V LWD L N+KL HS H + +FQ ++
Sbjct: 180955 LEKHKGCVNTVSFNAEGD-VLISGSDDRRVVLWDWQLGNVKLSFHS--GHANNVFQAKFM 180785
Query: 327 PHNE 330
P ++
Sbjct: 180784 PFSD 180773
Score = 40.8 bits (94), Expect = 0.27
Identities = 34/134 (25%), Positives = 55/134 (40%), Gaps = 2/134 (1%)
Frame = -2
Query: 230 VEDVSWHLLHESLFGSVADDQKLMIWD-TRSNNTSKPSHSVDAHTAEVNCLS-FNPYSEF 287
V V W HE++ S +D++LM+WD R ++ P H + N +S F F
Sbjct: 137966 VFQVEWDPNHETVLASSGEDRRLMVWDINRYHSRYFPFHLIQ----N*NWIS*FQFGGSF 137799
Query: 288 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
G + L L S HK +I W+ +++S D L VW +
Sbjct: 137798 --RVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQM 137625
Query: 348 SKIGEEQSPEDAED 361
++ + ED +D
Sbjct: 137624 AESIYREDDEDEDD 137583
Score = 34.7 bits (78), Expect(2) = 0.001
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 3/124 (2%)
Frame = -2
Query: 166 ECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTG 225
E +R+ G + P L G S S+ +S P+ + D G
Sbjct: 138941 EIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSEC-DPDLRLMG 138765
Query: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSK---PSHSVDAHTAEVNCLSFN 282
H ++W E S + DQ++ +WD + T K P H + T E CLSF+
Sbjct: 138764 HEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEV-TWE*LCLSFS 138588
Query: 283 PYSE 286
+E
Sbjct: 138587 *ITE 138576
Score = 33.1 bits (74), Expect(2) = 0.62
Identities = 22/82 (26%), Positives = 35/82 (41%), Gaps = 8/82 (9%)
Frame = -2
Query: 275 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE--------SHKDEIFQVQWS 326
EVN P ++ ++ V L+D L K + E H+ E + + WS
Sbjct: 138911 EVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWS 138732
Query: 327 PHNETILASSGTDRRLNVWDLS 348
E L S D+R+ +WD+S
Sbjct: 138731 SFKEGYLLSGSQDQRICLWDVS 138666
Score = 32.7 bits (73), Expect(2) = 0.001
Identities = 15/35 (42%), Positives = 19/35 (53%)
Frame = -1
Query: 313 FESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
F H+ I V W NE I S+G D +L +WDL
Sbjct: 138534 F*GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDL 138430
Score = 25.0 bits (53), Expect(2) = 0.62
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 359 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAEN 407
A D PE F GH + I D +W+ + S +D + +W + N
Sbjct: 138561 ASDLIPETWF*--GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN 138421
>emb|AL035522.1|ATT12J5 Arabidopsis thaliana DNA chromosome 4, BAC clone T12J5 (ESSAII
project)
Length = 84499
Score = 139 bits (351), Expect(2) = 9e-41
Identities = 69/136 (50%), Positives = 89/136 (64%), Gaps = 29/136 (21%)
Frame = -3
Query: 316 HKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK-------------------------- 349
++ E+FQV+W P++ET+LASSG DRRL VWD+++
Sbjct: 8057 YRGEVFQVEWDPNHETVLASSGEDRRLMVWDINRYHSRYFPFHLIQN*NWIS*FQFGGSF 7878
Query: 350 -IGEEQSPE--DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
+G+EQ DAEDGPPELLF HGGH AKISDF+WN +EPWVI SV+EDN +QVWQMAE
Sbjct: 7877 RVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAE 7698
Query: 407 NIYNDEDPEGSVDPEG 422
+IY ++D + D EG
Sbjct: 7697 SIYREDDEDEDDDDEG 7650
Score = 114 bits (286), Expect(2) = 3e-35
Identities = 53/96 (55%), Positives = 69/96 (71%)
Frame = -3
Query: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRL 173
++EI+ KI +GEVNRAR MPQ P ++ KT S+V +FDY + KP S EC+PDLRL
Sbjct: 9026 QVEIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRL 8850
Query: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISA 209
GH++EGYGL+W+ G+LLS S D ICLWD+SA
Sbjct: 8849 MGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSA 8742
Score = 95.5 bits (236), Expect = 9e-18
Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 3/104 (2%)
Frame = -1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MA +E + +++ + EE+ IWK+NTPFLYDL+++H LEWPSLT W+P P KD
Sbjct: 9610 MAAEEGKDEAGLDQ--VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKD 9437
Query: 61 --FSIHRLVLGTHTS-DEQNHLVIASVQLPNDDAQFDASHYDSE 101
F++H+L+LGTHTS Q+ L++A V +P DA+ D E
Sbjct: 9436 PYFAVHKLILGTHTSGGAQDFLMVADVVIPTPDAEPGLGGRDQE 9305
Score = 60.1 bits (144), Expect(2) = 3e-35
Identities = 27/61 (44%), Positives = 41/61 (66%)
Frame = -2
Query: 220 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCL 279
+T F GH +++EDV+WH+ +E++FGS DD +L+IWD R+N + H V H EV +
Sbjct: 8622 ETWF*GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN---QMQHQVKVHEREV*TI 8452
Query: 280 S 280
S
Sbjct: 8451 S 8449
Score = 53.5 bits (127), Expect(2) = 9e-41
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = -1
Query: 264 KPS--HSVDAHTA-EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK 317
KPS HS + ++N LSFNP++E++LAT S+D TVAL+DLR L LH H+
Sbjct: 8311 KPSSDHSTTLSSVLQINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHE 8141
Score = 43.5 bits (101), Expect = 0.042
Identities = 24/64 (37%), Positives = 38/64 (58%), Gaps = 2/64 (3%)
Frame = -2
Query: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLKLKLHSFESHKDEIFQVQWS 326
++ H VN +SFN + +L +GS D+ V LWD L N+KL HS H + +FQ ++
Sbjct: 51033 LEKHKGCVNTVSFNAEGD-VLISGSDDRRVVLWDWQLGNVKLSFHS--GHANNVFQAKFM 50863
Query: 327 PHNE 330
P ++
Sbjct: 50862 PFSD 50851
Score = 40.8 bits (94), Expect = 0.27
Identities = 34/134 (25%), Positives = 55/134 (40%), Gaps = 2/134 (1%)
Frame = -3
Query: 230 VEDVSWHLLHESLFGSVADDQKLMIWD-TRSNNTSKPSHSVDAHTAEVNCLS-FNPYSEF 287
V V W HE++ S +D++LM+WD R ++ P H + N +S F F
Sbjct: 8045 VFQVEWDPNHETVLASSGEDRRLMVWDINRYHSRYFPFHLIQ----N*NWIS*FQFGGSF 7878
Query: 288 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
G + L L S HK +I W+ +++S D L VW +
Sbjct: 7877 --RVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQM 7704
Query: 348 SKIGEEQSPEDAED 361
++ + ED +D
Sbjct: 7703 AESIYREDDEDEDD 7662
Score = 34.7 bits (78), Expect(2) = 0.002
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 3/124 (2%)
Frame = -3
Query: 166 ECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTG 225
E +R+ G + P L G S S+ +S P+ + D G
Sbjct: 9020 EIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSEC-DPDLRLMG 8844
Query: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSK---PSHSVDAHTAEVNCLSFN 282
H ++W E S + DQ++ +WD + T K P H + T E CLSF+
Sbjct: 8843 HEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEV-TWE*LCLSFS 8667
Query: 283 PYSE 286
+E
Sbjct: 8666 *ITE 8655
Score = 33.1 bits (74), Expect(2) = 0.65
Identities = 22/82 (26%), Positives = 35/82 (41%), Gaps = 8/82 (9%)
Frame = -3
Query: 275 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE--------SHKDEIFQVQWS 326
EVN P ++ ++ V L+D L K + E H+ E + + WS
Sbjct: 8990 EVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWS 8811
Query: 327 PHNETILASSGTDRRLNVWDLS 348
E L S D+R+ +WD+S
Sbjct: 8810 SFKEGYLLSGSQDQRICLWDVS 8745
Score = 32.7 bits (73), Expect(2) = 0.002
Identities = 15/35 (42%), Positives = 19/35 (53%)
Frame = -2
Query: 313 FESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
F H+ I V W NE I S+G D +L +WDL
Sbjct: 8613 F*GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDL 8509
Score = 25.0 bits (53), Expect(2) = 0.65
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -2
Query: 359 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAEN 407
A D PE F GH + I D +W+ + S +D + +W + N
Sbjct: 8640 ASDLIPETWF*--GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN 8500
>emb|AL022023.1|ATM4E13 Arabidopsis thaliana DNA chromosome 4, BAC clone M4E13 (ESSAII project)
Length = 80346
Score = 139 bits (351), Expect(2) = 9e-41
Identities = 69/136 (50%), Positives = 89/136 (64%), Gaps = 29/136 (21%)
Frame = -2
Query: 316 HKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK-------------------------- 349
++ E+FQV+W P++ET+LASSG DRRL VWD+++
Sbjct: 39011 YRGEVFQVEWDPNHETVLASSGEDRRLMVWDINRYHSRYFPFHLIQN*NWIS*FQFGGSF 38832
Query: 350 -IGEEQSPE--DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
+G+EQ DAEDGPPELLF HGGH AKISDF+WN +EPWVI SV+EDN +QVWQMAE
Sbjct: 38831 RVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAE 38652
Query: 407 NIYNDEDPEGSVDPEG 422
+IY ++D + D EG
Sbjct: 38651 SIYREDDEDEDDDDEG 38604
Score = 114 bits (286), Expect(2) = 3e-35
Identities = 53/96 (55%), Positives = 69/96 (71%)
Frame = -2
Query: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRL 173
++EI+ KI +GEVNRAR MPQ P ++ KT S+V +FDY + KP S EC+PDLRL
Sbjct: 39980 QVEIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRL 39804
Query: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISA 209
GH++EGYGL+W+ G+LLS S D ICLWD+SA
Sbjct: 39803 MGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSA 39696
Score = 95.5 bits (236), Expect = 9e-18
Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 3/104 (2%)
Frame = -3
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
MA +E + +++ + EE+ IWK+NTPFLYDL+++H LEWPSLT W+P P KD
Sbjct: 40564 MAAEEGKDEAGLDQ--VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKD 40391
Query: 61 --FSIHRLVLGTHTS-DEQNHLVIASVQLPNDDAQFDASHYDSE 101
F++H+L+LGTHTS Q+ L++A V +P DA+ D E
Sbjct: 40390 PYFAVHKLILGTHTSGGAQDFLMVADVVIPTPDAEPGLGGRDQE 40259
Score = 60.1 bits (144), Expect(2) = 3e-35
Identities = 27/61 (44%), Positives = 41/61 (66%)
Frame = -1
Query: 220 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCL 279
+T F GH +++EDV+WH+ +E++FGS DD +L+IWD R+N + H V H EV +
Sbjct: 39576 ETWF*GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN---QMQHQVKVHEREV*TI 39406
Query: 280 S 280
S
Sbjct: 39405 S 39403
Score = 53.5 bits (127), Expect(2) = 9e-41
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = -3
Query: 264 KPS--HSVDAHTA-EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK 317
KPS HS + ++N LSFNP++E++LAT S+D TVAL+DLR L LH H+
Sbjct: 39265 KPSSDHSTTLSSVLQINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHE 39095
Score = 40.8 bits (94), Expect = 0.27
Identities = 34/134 (25%), Positives = 55/134 (40%), Gaps = 2/134 (1%)
Frame = -2
Query: 230 VEDVSWHLLHESLFGSVADDQKLMIWD-TRSNNTSKPSHSVDAHTAEVNCLS-FNPYSEF 287
V V W HE++ S +D++LM+WD R ++ P H + N +S F F
Sbjct: 38999 VFQVEWDPNHETVLASSGEDRRLMVWDINRYHSRYFPFHLIQ----N*NWIS*FQFGGSF 38832
Query: 288 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
G + L L S HK +I W+ +++S D L VW +
Sbjct: 38831 --RVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQM 38658
Query: 348 SKIGEEQSPEDAED 361
++ + ED +D
Sbjct: 38657 AESIYREDDEDEDD 38616
Score = 34.7 bits (78), Expect(2) = 0.002
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 3/124 (2%)
Frame = -2
Query: 166 ECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTG 225
E +R+ G + P L G S S+ +S P+ + D G
Sbjct: 39974 EIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSEC-DPDLRLMG 39798
Query: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSK---PSHSVDAHTAEVNCLSFN 282
H ++W E S + DQ++ +WD + T K P H + T E CLSF+
Sbjct: 39797 HEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEV-TWE*LCLSFS 39621
Query: 283 PYSE 286
+E
Sbjct: 39620 *ITE 39609
Score = 33.1 bits (74), Expect(2) = 0.66
Identities = 22/82 (26%), Positives = 35/82 (41%), Gaps = 8/82 (9%)
Frame = -2
Query: 275 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE--------SHKDEIFQVQWS 326
EVN P ++ ++ V L+D L K + E H+ E + + WS
Sbjct: 39944 EVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWS 39765
Query: 327 PHNETILASSGTDRRLNVWDLS 348
E L S D+R+ +WD+S
Sbjct: 39764 SFKEGYLLSGSQDQRICLWDVS 39699
Score = 32.7 bits (73), Expect(2) = 0.002
Identities = 15/35 (42%), Positives = 19/35 (53%)
Frame = -1
Query: 313 FESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
F H+ I V W NE I S+G D +L +WDL
Sbjct: 39567 F*GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDL 39463
Score = 25.0 bits (53), Expect(2) = 0.66
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 359 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAEN 407
A D PE F GH + I D +W+ + S +D + +W + N
Sbjct: 39594 ASDLIPETWF*--GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTN 39454
>ref|XM_067237.1| Homo sapiens similar to Rbap46 polypeptide (LOC131167), mRNA
Length = 630
Score = 171 bits (434), Expect = 1e-40
Identities = 85/106 (80%), Positives = 90/106 (84%)
Frame = +1
Query: 1 MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
M +KEAAFD+AVEE VI EEYKIWK NT F YDLVMT ALEWPSLTAQWLPDVTRPEGKD
Sbjct: 40 MTNKEAAFDNAVEEHVIKEEYKIWKNNTSFPYDLVMTQALEWPSLTAQWLPDVTRPEGKD 219
Query: 61 FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFG 106
FS HRLV GTHTS EQNHL VQLP+DDAQ DASHY+S+KGE G
Sbjct: 220 FSSHRLVPGTHTSVEQNHL----VQLPSDDAQLDASHYNSKKGECG 345
Score = 107 bits (268), Expect = 2e-21
Identities = 63/116 (54%), Positives = 71/116 (60%), Gaps = 16/116 (13%)
Frame = +1
Query: 147 SDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWD 206
SD D + + SK GEC DL L GHQK G GL NPNLSGHLL SD+HTICLWD
Sbjct: 289 SDDAQLDASHYNSK---KGECG-DLHLCGHQKAGCGLLRNPNLSGHLLITSDNHTICLWD 456
Query: 207 ISAVPKKGKVVDAKTIFTGHTAVV----------------EDVSWHLLHESLFGSV 246
ISAV + KV++ KTIFTGHTAV +D S HL HESLFGS+
Sbjct: 457 ISAVSNEEKVLNVKTIFTGHTAVFGDRDASSHLYHNLYYGKDASSHLFHESLFGSI 624
>gb|AC005825.3|AC005825 Arabidopsis thaliana chromosome II section 96 of 255 of the complete
sequence. Sequence from clones T24I21, F12A24
Length = 97380
Score = 160 bits (404), Expect = 3e-37
Identities = 85/193 (44%), Positives = 112/193 (57%), Gaps = 30/193 (15%)
Frame = -3
Query: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRL 173
++EI +I +GEVNRAR MPQ P ++ KT +V +FDY KH +K S EC+PDLRL
Sbjct: 87430 QVEIRQRIRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTS-ECDPDLRL 87254
Query: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAK------------- 220
GH KEGYGLSW+P G+LLS S D ICLWD+SA P + KV++A
Sbjct: 87253 VGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATP-QDKVLNAMFVYEVKGTV*LVS 87077
Query: 221 -----------------TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTS 263
+F GH + + DVSWH+ +E+LFGS +D +L+IWDTR+N
Sbjct: 87076 FFCFQKMWFDTSDFTLLILF*GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTN--- 86906
Query: 264 KPSHSVDAHTAEV 276
+ H V H EV
Sbjct: 86905 QMQHQVKVHEREV 86867
Score = 106 bits (265), Expect(2) = 8e-39
Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 2/67 (2%)
Frame = -1
Query: 349 KIGEEQSPE--DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
++GEEQ DAEDGPPELLF HGGH AKISDF+WN NEPWVI SV+EDN +QVWQMAE
Sbjct: 86244 RVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAE 86065
Query: 407 NIYNDED 413
+IY DE+
Sbjct: 86064 SIYRDEE 86044
Score = 90.1 bits (222), Expect = 4e-16
Identities = 43/95 (45%), Positives = 61/95 (63%), Gaps = 6/95 (6%)
Frame = -3
Query: 4 KEAAFDDAVEER---VINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 60
+E D+ EE + E++ +WKKNTPFLYDL+++H LEWPSLT W+P P D
Sbjct: 87979 REIMADEGKEETGMGQVEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVAD 87800
Query: 61 --FSIHRLVLGTHTS-DEQNHLVIASVQLPNDDAQ 92
F +H+L+LGTHTS Q+ L++A V P +A+
Sbjct: 87799 SYFGVHKLILGTHTSGSAQDFLMVADVVTPTPNAE 87695
Score = 80.1 bits (196), Expect(2) = 8e-39
Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 51/127 (40%)
Frame = -2
Query: 274 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH----------------- 316
++VN LSFNP++E++LAT S+D TVAL+DLR L LH SH
Sbjct: 86723 SQVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEYVPLHFLITSALSINC 86544
Query: 317 ----------------------------------KDEIFQVQWSPHNETILASSGTDRRL 342
+ E+FQV+W P++ET+LASSG DRRL
Sbjct: 86543 VRTKC*YLWTPVD*VTVKDCLL*KSTFLKKYSDFRGEVFQVEWDPNHETVLASSGEDRRL 86364
Query: 343 NVWDLSK 349
VWDL++
Sbjct: 86363 MVWDLNR 86343
Score = 39.3 bits (90), Expect = 0.79
Identities = 36/165 (21%), Positives = 59/165 (34%), Gaps = 32/165 (19%)
Frame = -3
Query: 275 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE--------SHKDEIFQVQWS 326
EVN P ++ ++ V L+D K + E H E + + WS
Sbjct: 87394 EVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTSECDPDLRLVGHDKEGYGLSWS 87215
Query: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPE------------------------DAEDG 362
P E L S D+++ +WD+S +++ D D
Sbjct: 87214 PFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEVKGTV*LVSFFCFQKMWFDTSDF 87035
Query: 363 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAEN 407
LL + GH + I+D SW+ + S ED + +W N
Sbjct: 87034 --TLLILF*GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTN 86906
>ref|NM_127512.1| Arabidopsis thaliana chromosome 2 CHR2v12152001 genomic sequence
Length = 1617
Score = 161 bits (408), Expect = 1e-37
Identities = 116/366 (31%), Positives = 178/366 (47%), Gaps = 27/366 (7%)
Frame = +1
Query: 70 THTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNR 129
T+ S ++ +V + D+ + D DS+ + G S + I++ ++ H G VNR
Sbjct: 361 TNVSGKRRDVVPKTFGNGEDEDEDDEDDSDSDDDD-GDEASKTPNIQVR-RVAHHGCVNR 534
Query: 130 ARYMPQNPCIIATKTPSSDVLVFDYTKH---------PSKPDPSGECN--PDLRLRGHQK 178
R MPQN I + S V V+D + H K S N P + GH+
Sbjct: 535 IRAMPQNSHICVSWADSGHVQVWDMSSHLNALAESETEGKDGTSPVLNQAPLVNFSGHKD 714
Query: 179 EGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLL 238
EGY + W+P +G LLS I LW+ P G F GHTA VED+ W
Sbjct: 715 EGYAIDWSPATAGRLLSGDCKSMIHLWE----PASGSWAVDPIPFAGHTASVEDLQWSPA 882
Query: 239 HESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTV 298
E++F S + D + +WD R + P+ S AH A+VN +S+N + +LA+GS D T
Sbjct: 883 EENVFASCSVDGSVAVWDIRLGKS--PALSFKAHNADVNVISWNRLASCMLASGSDDGTF 1056
Query: 299 ALWDLRNLK---LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS--KIGEE 353
++ DLR +K + FE HK I ++WS H + LA + D +L +WDLS K EE
Sbjct: 1057SIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLTIWDLSLEKDEEE 1236
Query: 354 QSPEDA---------EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED--NIMQVW 402
++ +A +D PP+LLF+H G + + W+ P +I S + D NI+ +
Sbjct: 1237EAEFNAQTKELVNTPQDLPPQLLFVHQGQ-KDLKELHWHNQIPGMIISTAGDGFNILMPY 1413
Query: 403 QMAENI 408
+ +
Sbjct: 1414NIQNTL 1431
>gb|AF370506.1|AF370506 Arabidopsis thaliana putative WD-40 repeat protein (At2g19540;
F3P11.14) mRNA, complete cds
Length = 1617
Score = 161 bits (408), Expect = 1e-37
Identities = 116/366 (31%), Positives = 178/366 (47%), Gaps = 27/366 (7%)
Frame = +1
Query: 70 THTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNR 129
T+ S ++ +V + D+ + D DS+ + G S + I++ ++ H G VNR
Sbjct: 361 TNVSGKRRDVVPKTFGNGEDEDEDDEDDSDSDDDD-GDEASKTPNIQVR-RVAHHGCVNR 534
Query: 130 ARYMPQNPCIIATKTPSSDVLVFDYTKH---------PSKPDPSGECN--PDLRLRGHQK 178
R MPQN I + S V V+D + H K S N P + GH+
Sbjct: 535 IRAMPQNSHICVSWADSGHVQVWDMSSHLNALAESETEGKDGTSPVLNQAPLVNFSGHKD 714
Query: 179 EGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLL 238
EGY + W+P +G LLS I LW+ P G F GHTA VED+ W
Sbjct: 715 EGYAIDWSPATAGRLLSGDCKSMIHLWE----PASGSWAVDPIPFAGHTASVEDLQWSPA 882
Query: 239 HESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTV 298
E++F S + D + +WD R + P+ S AH A+VN +S+N + +LA+GS D T
Sbjct: 883 EENVFASCSVDGSVAVWDIRLGKS--PALSFKAHNADVNVISWNRLASCMLASGSDDGTF 1056
Query: 299 ALWDLRNLK---LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS--KIGEE 353
++ DLR +K + FE HK I ++WS H + LA + D +L +WDLS K EE
Sbjct: 1057SIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLTIWDLSLEKDEEE 1236
Query: 354 QSPEDA---------EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED--NIMQVW 402
++ +A +D PP+LLF+H G + + W+ P +I S + D NI+ +
Sbjct: 1237EAEFNAQTKELVNTPQDLPPQLLFVHQGQ-KDLKELHWHNQIPGMIISTAGDGFNILMPY 1413
Query: 403 QMAENI 408
+ +
Sbjct: 1414NIQNTL 1431
>gb|AC007054.24|AC007054 Drosophila melanogaster, chromosome 2R, region 41E-41E, BAC clone
BACR45O18, complete sequence
Length = 176510
Score = 132 bits (332), Expect = 7e-29
Identities = 93/293 (31%), Positives = 144/293 (48%), Gaps = 19/293 (6%)
Frame = +1
Query: 121 INHEGEVNRARYMPQ-NPCIIATKTPSSDVLVFDYTK--------HPSKPDPSGECNPDL 171
+ H+G VNR R N A+ + V ++D T+ +K E P
Sbjct: 80839 VKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPVF 81018
Query: 172 RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVE 231
GHQ+EG+ + W+P+ G L + I +W + V VD + + GH+ VE
Sbjct: 81019 TFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVW--TPVEDGTWKVDQRPL-AGHSQSVE 81189
Query: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILA 290
D+ W S+ S + D+ + IWD R++ + DAH ++VN +S+N FI A
Sbjct: 81190 DLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWNRNEPFI-A 81366
Query: 291 TGSADKTVALWDLRNLKLK--LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
+G D + +WDLR + K + +F+ H D I V+WSP T+LAS G D ++ +WDL+
Sbjct: 81367 SGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDLA 81546
Query: 349 ---KIGEEQSPEDAEDG----PPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
I + P ED PP+LLFIH G +I + W+P P V+ S +
Sbjct: 81547 VEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQ-KEIKELHWHPQLPGVLLSTA 81702
Score = 50.8 bits (120), Expect = 3e-04
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +1
Query: 312 SFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE---EQSPEDAEDGPPELLF 368
+F H+ E F + WSP + +LA+ R ++VW + G +Q P
Sbjct: 81019 TFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVEDGTWKVDQRPL----------- 81165
Query: 369 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
GH+ + D W+PNE V+ S S D +++W
Sbjct: 81166 --AGHSQSVEDLQWSPNERSVLASCSVDKTIRIW 81261
>gb|AY071477.1| Drosophila melanogaster RE55020 full length cDNA
Length = 1544
Score = 132 bits (332), Expect = 7e-29
Identities = 93/293 (31%), Positives = 144/293 (48%), Gaps = 19/293 (6%)
Frame = +3
Query: 121 INHEGEVNRARYMPQ-NPCIIATKTPSSDVLVFDYTK--------HPSKPDPSGECNPDL 171
+ H+G VNR R N A+ + V ++D T+ +K E P
Sbjct: 552 VKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPVF 731
Query: 172 RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVE 231
GHQ+EG+ + W+P+ G L + I +W + V VD + + GH+ VE
Sbjct: 732 TFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVW--TPVEDGTWKVDQRPL-AGHSQSVE 902
Query: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILA 290
D+ W S+ S + D+ + IWD R++ + DAH ++VN +S+N FI A
Sbjct: 903 DLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWNRNEPFI-A 1079
Query: 291 TGSADKTVALWDLRNLKLK--LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
+G D + +WDLR + K + +F+ H D I V+WSP T+LAS G D ++ +WDL+
Sbjct: 1080SGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDLA 1259
Query: 349 ---KIGEEQSPEDAEDG----PPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
I + P ED PP+LLFIH G +I + W+P P V+ S +
Sbjct: 1260VEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQ-KEIKELHWHPQLPGVLLSTA 1415
Score = 50.8 bits (120), Expect = 3e-04
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +3
Query: 312 SFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE---EQSPEDAEDGPPELLF 368
+F H+ E F + WSP + +LA+ R ++VW + G +Q P
Sbjct: 732 TFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVEDGTWKVDQRPL----------- 878
Query: 369 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
GH+ + D W+PNE V+ S S D +++W
Sbjct: 879 --AGHSQSVEDLQWSPNERSVLASCSVDKTIRIW 974
>gb|AE003785.2|AE003785 Drosophila melanogaster genomic scaffold 142000013386052 section 4 of 5,
complete sequence
Length = 296202
Score = 132 bits (332), Expect = 7e-29
Identities = 93/293 (31%), Positives = 144/293 (48%), Gaps = 19/293 (6%)
Frame = +1
Query: 121 INHEGEVNRARYMPQ-NPCIIATKTPSSDVLVFDYTK--------HPSKPDPSGECNPDL 171
+ H+G VNR R N A+ + V ++D T+ +K E P
Sbjct: 106378 VKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPVF 106557
Query: 172 RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVE 231
GHQ+EG+ + W+P+ G L + I +W + V VD + + GH+ VE
Sbjct: 106558 TFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVW--TPVEDGTWKVDQRPL-AGHSQSVE 106728
Query: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILA 290
D+ W S+ S + D+ + IWD R++ + DAH ++VN +S+N FI A
Sbjct: 106729 DLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWNRNEPFI-A 106905
Query: 291 TGSADKTVALWDLRNLKLK--LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
+G D + +WDLR + K + +F+ H D I V+WSP T+LAS G D ++ +WDL+
Sbjct: 106906 SGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDLA 107085
Query: 349 ---KIGEEQSPEDAEDG----PPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
I + P ED PP+LLFIH G +I + W+P P V+ S +
Sbjct: 107086 VEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQ-KEIKELHWHPQLPGVLLSTA 107241
Score = 50.8 bits (120), Expect = 3e-04
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +1
Query: 312 SFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE---EQSPEDAEDGPPELLF 368
+F H+ E F + WSP + +LA+ R ++VW + G +Q P
Sbjct: 106558 TFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVEDGTWKVDQRPL----------- 106704
Query: 369 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
GH+ + D W+PNE V+ S S D +++W
Sbjct: 106705 --AGHSQSVEDLQWSPNERSVLASCSVDKTIRIW 106800
>emb|AL353012.1|SPBC1711 S.pombe chromosome II cosmid c1711
Length = 38000
Score = 130 bits (327), Expect = 3e-28
Identities = 106/393 (26%), Positives = 182/393 (45%), Gaps = 23/393 (5%)
Frame = +3
Query: 29 PFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPN 88
P +Y+++ ++WP L+ L D E + + ++G + + N + ++L
Sbjct: 15531 PSVYEMLHNIQVKWPFLSFDILQDSLGEERRAWPHQMYLVGGSQALDSNDNELTVMKL-- 15704
Query: 89 DDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM--PQNPC---IIATK 143
+Q + +D I I+ +G NR R P N ++A+
Sbjct: 15705 --SQLYKTQHDENDDASDNSDVEEDPILEHKSISTKGACNRVRSARRPANSSKESLLASF 15878
Query: 144 TPSSDVLVFDYTKHPSKPDPSG------ECNPDLRLRGHQKEGYGLSWNPNLSGHLLSAS 197
+ V ++D H D G E +P + H+ EGY L W+P LLS
Sbjct: 15879 HETGKVHIWDIAPHLRSLDSPGVMVSRKENSPLYTVNRHKTEGYALDWSP-FEYSLLSGD 16055
Query: 198 DDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDT 257
+ + I L S G + F HTA VED+ W +++F S + D IWD
Sbjct: 16056 NANEIFLTKYS----NGGWQTDSSPFLSHTAAVEDLQWSPSEKNVFSSCSCDGTFRIWDV 16223
Query: 258 RSNNTSKPSHSVDAHTA-EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------L 310
R N + +V+AH +VN LS+N +LATG+ + ++WDLR+LK +
Sbjct: 16224 R-NKQKTSALTVNAHPGVDVNVLSWNTRVPNLLATGADNGVWSVWDLRSLKSSSSVATPV 16400
Query: 311 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS-KIGEEQ----SPEDAEDGPPE 365
SF+ H+ I+ ++W P+ ++++ G D ++++WDLS ++ EE+ + E +D PP+
Sbjct: 16401 ASFKWHRAPIYSIEWHPNEDSVIGVVGADNQISLWDLSVELDEEEQDSRAAEGLQDVPPQ 16580
Query: 366 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
L+FIH G +I + W+ P I S + I
Sbjct: 16581 LMFIHMGQ-QEIKEMHWHRQIPGTIVSTAMTGI 16676
Score = 60.5 bits (145), Expect = 3e-07
Identities = 66/268 (24%), Positives = 113/268 (41%), Gaps = 10/268 (3%)
Frame = +3
Query: 165 GECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDIS----AVPKKGKVVDAK 220
G CN R+R ++ N + L S + + +WDI+ ++ G +V K
Sbjct: 15807 GACN---RVRSARRPA-----NSSKESLLASFHETGKVHIWDIAPHLRSLDSPGVMVSRK 15962
Query: 221 TIFTGHTAVVEDVSWHLLHESLF--GSVADDQKLMIWDTRSNNTSKPSHSVD--AHTAEV 276
+T + L S F ++ D I+ T+ +N + S +HTA V
Sbjct: 15963 ENSPLYTVNRHKTEGYALDWSPFEYSLLSGDNANEIFLTKYSNGGWQTDSSPFLSHTAAV 16142
Query: 277 NCLSFNPYSEFILATGSADKTVALWDLRNL-KLKLHSFESHKD-EIFQVQWSPHNETILA 334
L ++P + + ++ S D T +WD+RN K + +H ++ + W+ +LA
Sbjct: 16143 EDLQWSPSEKNVFSSCSCDGTFRIWDVRNKQKTSALTVNAHPGVDVNVLSWNTRVPNLLA 16322
Query: 335 SSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
+ + +VWDL + S P F H A I W+PNE VI V
Sbjct: 16323 TGADNGVWSVWDLRSLKSSSSV-----ATPVASF--KWHRAPIYSIEWHPNEDSVIGVVG 16481
Query: 395 EDNIMQVWQMAENIYNDEDPEGSVDPEG 422
DN + +W ++ + DE+ + S EG
Sbjct: 16482 ADNQISLWDLSVEL--DEEEQDSRAAEG 16559
Score = 59.3 bits (142), Expect = 7e-07
Identities = 53/183 (28%), Positives = 81/183 (43%), Gaps = 3/183 (1%)
Frame = +1
Query: 167 CNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGH 226
CN H + L W LLS S D T + D+ ++ +A + F
Sbjct: 34141 CNCVKSFTYHSDKVSCLDWYSKAPSVLLSGSYDKTAKIADL-------RLEEAPSSFQV- 34296
Query: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSE 286
T+ VE+V+W E+ F D+ + D R N SK + AH ++CLS NP
Sbjct: 34297 TSDVENVAWDQHSENNFFIGTDNGIVYYCDAR--NLSKSVWQLQAHDGPISCLSVNPSVP 34470
Query: 287 FILATGSADKTVALWDLRNLKLKL-HSFESHKDEIFQVQWSPHNETI--LASSGTDRRLN 343
+ATGS D+ V LW+ + K+ S + +F ++ T LA+SG+ +
Sbjct: 34471 SFVATGSTDRVVKLWNTSDSSPKMVVSRDLDVGRVFTCSFTTDESTAFHLAASGSKGVVR 34650
Query: 344 VWD 346
VWD
Sbjct: 34651 VWD 34659
Score = 55.5 bits (132), Expect = 1e-05
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 2/234 (0%)
Frame = +1
Query: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSW 235
H LS N N L+S S D T+ LWD+S + FT H+ V + W
Sbjct: 34039 HTDAVLALSSNRNAHNLLVSGSADTTLKLWDLSTC-------NCVKSFTYHSDKVSCLDW 34197
Query: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
+ S+ S + D+ I D R S V T++V ++++ +SE G+ +
Sbjct: 34198 YSKAPSVLLSGSYDKTAKIADLRLEEAPS-SFQV---TSDVENVAWDQHSENNFFIGTDN 34365
Query: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS 355
V D RNL + ++H I + +P + +A+ TDR + +W+ S
Sbjct: 34366 GIVYYCDARNLSKSVWQLQAHDGPISCLSVNPSVPSFVATGSTDRVVKLWNTS------- 34524
Query: 356 PEDAEDGPPELLFIHGGHTAKISDFSWNPNE--PWVICSVSEDNIMQVWQMAEN 407
D P+++ ++ S+ +E + + + +++VW A N
Sbjct: 34525 -----DSSPKMVVSRDLDVGRVFTCSFTTDESTAFHLAASGSKGVVRVWDTATN 34671
>ref|NM_031485.1| Homo sapiens glutamate rich WD repeat protein GRWD (GRWD), mRNA
Length = 2262
Score = 123 bits (309), Expect = 3e-26
Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 10/243 (4%)
Frame = +3
Query: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKV--VDA 219
D + P GH EG+ L W+P ++G LL+ I LW P G VD
Sbjct: 612 DEQAQMKPIFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLW----TPTDGGSWHVDQ 779
Query: 220 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR-SNNTSKPSHSVDAHTAEVNC 278
+ F GHT VED+ W ++F S + D + IWD R + + + + AH +VN
Sbjct: 780 RP-FVGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNV 956
Query: 279 LSFNPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETILASS 336
+S++ F+L +G D + +WDLR K + +F+ H + V+W P + + A+S
Sbjct: 957 ISWSRREPFLL-SGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAAS 1133
Query: 337 GTDRRLNVWDLS-----KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 391
G D ++ WDL+ + G+ ++ D P +LLF+H G T ++ + W+P P ++
Sbjct: 1134GADHQITQWDLAVERDPEAGDVEADPGLADLPQQLLFVHQGET-ELKELHWHPQCPGLLV 1310
Query: 392 SVS 394
S +
Sbjct: 1311STA 1319
Score = 43.9 bits (102), Expect = 0.032
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Frame = +3
Query: 310 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE---EQSPEDAEDGPPEL 366
+ SF H E F + WSP L + + +++W + G +Q P
Sbjct: 636 IFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRP---------- 785
Query: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
F+ GHT + D W+P E V S S D +++W +
Sbjct: 786 -FV--GHTRSVEDLQWSPTENTVFASCSADASIRIWDI 890
>gb|BC002440.1|BC002440 Homo sapiens, Similar to CG12792 gene product, clone MGC:2600
IMAGE:3347366, mRNA, complete cds
Length = 2262
Score = 123 bits (309), Expect = 3e-26
Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 10/243 (4%)
Frame = +3
Query: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKV--VDA 219
D + P GH EG+ L W+P ++G LL+ I LW P G VD
Sbjct: 612 DEQAQMKPIFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLW----TPTDGGSWHVDQ 779
Query: 220 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR-SNNTSKPSHSVDAHTAEVNC 278
+ F GHT VED+ W ++F S + D + IWD R + + + + AH +VN
Sbjct: 780 RP-FVGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNV 956
Query: 279 LSFNPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETILASS 336
+S++ F+L +G D + +WDLR K + +F+ H + V+W P + + A+S
Sbjct: 957 ISWSRREPFLL-SGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAAS 1133
Query: 337 GTDRRLNVWDLS-----KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 391
G D ++ WDL+ + G+ ++ D P +LLF+H G T ++ + W+P P ++
Sbjct: 1134GADHQITQWDLAVERDPEAGDVEADPGLADLPQQLLFVHQGET-ELKELHWHPQCPGLLV 1310
Query: 392 SVS 394
S +
Sbjct: 1311STA 1319
Score = 43.9 bits (102), Expect = 0.032
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Frame = +3
Query: 310 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE---EQSPEDAEDGPPEL 366
+ SF H E F + WSP L + + +++W + G +Q P
Sbjct: 636 IFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRP---------- 785
Query: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
F+ GHT + D W+P E V S S D +++W +
Sbjct: 786 -FV--GHTRSVEDLQWSPTENTVFASCSADASIRIWDI 890
>gb|AF337808.1|AF337808 Homo sapiens glutamate rich WD repeat protein (GRWD) mRNA, complete
cds
Length = 2240
Score = 123 bits (309), Expect = 3e-26
Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 10/243 (4%)
Frame = +1
Query: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKV--VDA 219
D + P GH EG+ L W+P ++G LL+ I LW P G VD
Sbjct: 607 DEQAQMKPIFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLW----TPTDGGSWHVDQ 774
Query: 220 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR-SNNTSKPSHSVDAHTAEVNC 278
+ F GHT VED+ W ++F S + D + IWD R + + + + AH +VN
Sbjct: 775 RP-FVGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNV 951
Query: 279 LSFNPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETILASS 336
+S++ F+L +G D + +WDLR K + +F+ H + V+W P + + A+S
Sbjct: 952 ISWSRREPFLL-SGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAAS 1128
Query: 337 GTDRRLNVWDLS-----KIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 391
G D ++ WDL+ + G+ ++ D P +LLF+H G T ++ + W+P P ++
Sbjct: 1129GADHQITQWDLAVERDPEAGDVEADPGLADLPQQLLFVHQGET-ELKELHWHPQCPGLLV 1305
Query: 392 SVS 394
S +
Sbjct: 1306STA 1314
Score = 43.9 bits (102), Expect = 0.032
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Frame = +1
Query: 310 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE---EQSPEDAEDGPPEL 366
+ SF H E F + WSP L + + +++W + G +Q P
Sbjct: 631 IFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRP---------- 780
Query: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
F+ GHT + D W+P E V S S D +++W +
Sbjct: 781 -FV--GHTRSVEDLQWSPTENTVFASCSADASIRIWDI 885
>gb|BC008121.1|BC008121 Mus musculus, Similar to glutamate rich WD repeat protein GRWD,
clone IMAGE:3498842, mRNA, partial cds
Length = 1907
Score = 122 bits (306), Expect = 7e-26
Identities = 74/243 (30%), Positives = 118/243 (48%), Gaps = 10/243 (4%)
Frame = +1
Query: 162 DPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKV--VDA 219
D P GH EG+ L W+P + G LL+ + LW P +G VD
Sbjct: 580 DEQARIKPIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNVHLW----TPTEGGSWNVDQ 747
Query: 220 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR-SNNTSKPSHSVDAHTAEVNC 278
+ F GHT VED+ W +++F S + D + IWD R + + + AH +VN
Sbjct: 748 RP-FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNV 924
Query: 279 LSFNPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETILASS 336
+S++ F+L +G D + +WDLR K + +F+ H + V+W P + + A+S
Sbjct: 925 ISWSRREPFLL-SGGDDGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAAS 1101
Query: 337 GTDRRLNVWDLSKIGEEQSPEDAEDG-----PPELLFIHGGHTAKISDFSWNPNEPWVIC 391
G D ++ WDL+ + +S E D P +LLF+H G T + + W+P P V+
Sbjct: 1102GADNQITQWDLAVERDPESGETETDPGLAALPQQLLFVHQGET-DLKELHWHPQCPGVLI 1278
Query: 392 SVS 394
S +
Sbjct: 1279STA 1287
Score = 44.7 bits (104), Expect = 0.019
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = +1
Query: 310 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE---EQSPEDAEDGPPEL 366
+ SF H E F + WSP L + + +++W ++ G +Q P
Sbjct: 604 IFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWNVDQRP---------- 753
Query: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
F+ GHT + D W+P E V S S D +++W +
Sbjct: 754 -FV--GHTRSVEDLQWSPTEDTVFASCSADASIRIWDI 858
>emb|Z48622.1|SC9553 S.cerevisiae chromosome XIII cosmid 9553
Length = 16279
Score = 119 bits (299), Expect = 5e-25
Identities = 100/410 (24%), Positives = 176/410 (42%), Gaps = 35/410 (8%)
Frame = -1
Query: 29 PFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD---EQNHLVIASVQ 85
P +Y+++ + WP LT +PD E +++ ++L T T ++N L++ ++
Sbjct: 15475 PTVYEMLHNVNMPWPCLTLDVIPDTLGSERRNYP-QSILLTTATQSSRKKENELMVLALS 15299
Query: 86 -----LPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMP----QN 136
L DD + + D E V IE E I NR + P
Sbjct: 15298 NLAKTLLKDDNEGEDDEEDDED-------DVDPVIENE-NIPLRDTTNRLKVSPFAISNQ 15143
Query: 137 PCIIATKTPSSDVLVFDYTKH------PSKPDPSGECNPDLRLRGHQK-EGYGLSWNPNL 189
+ AT + + DV +++ P P P ++ H EGYGL W+P +
Sbjct: 15142 EVLTATMSENGDVYIYNLAPQSKAFSTPGYQIPKSAKRPIHTVKNHGNVEGYGLDWSPLI 14963
Query: 190 SGHLLSASDDHTICLWDISAVPKKGK--VVDAKTIFTGHTAVVEDVSWHLLHESLFGSVA 247
L + D C I + V D + + +ED+ W ++F +
Sbjct: 14962 KTGALLSGD----CSGQIYFTQRHTSRWVTDKQPFTVSNNKSIEDIQWSRTESTVFATAG 14795
Query: 248 DDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 307
D + IWDTRS KP+ SV A +VN +S++ ++LA+G + T +WDLR
Sbjct: 14794 CDGYIRIWDTRSKK-HKPAISVKASNTDVNVISWSDKIGYLLASGDDNGTWGVWDLRQFT 14618
Query: 308 -------LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ------ 354
+ ++ HK I + ++P +E+I+A D + +WDLS +++
Sbjct: 14617 PSNADAVQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNTVTLWDLSVEADDEEIKQQA 14438
Query: 355 -SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
++ ++ PP+LLF+H ++ D W+ P + S D + VW+
Sbjct: 14437 AETKELQEIPPQLLFVH--WQKEVKDVKWHKQIPGCLVSTGTDG-LNVWK 14297
>ref|NM_065690.1| Caenorhabditis elegans
Length = 1362
Score = 111 bits (278), Expect = 1e-22
Identities = 95/391 (24%), Positives = 164/391 (41%), Gaps = 23/391 (5%)
Frame = +1
Query: 29 PFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE--QNHLVIASV-- 84
P Y L + +WP L+ + D F ++ +D+ N +++ +
Sbjct: 181 PSAYKLFHSFNSDWPCLSFDVVKDGLGENRTQFPAECYIVSGTQADKPRDNEIIVMGLKN 360
Query: 85 ------QLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARY-MPQNP 137
+ N D S +SE + K+ + I H G +NR R +
Sbjct: 361 LTTMRKEKENKGDDSDTSEDESEDEDAEEEKKREPKMHA-VSIPHYGGINRIRSDRLGDS 537
Query: 138 CIIATKTPSSDVLVFDYT---------KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPN 188
+ A + V V++ T SK + P G KEGYGL+W+
Sbjct: 538 TVCACWSDQGRVQVWNITDALNYTHGMSGESKTEVQKIDRPLFTNNGSGKEGYGLAWSSL 717
Query: 189 LSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 248
+G L + I LW + + G+ TGH VED++W L S +
Sbjct: 718 KTGDLATGDIIKKIYLWQMK---EGGQWAVGANPLTGHKKSVEDLAWSPTETGLLASCSA 888
Query: 249 DQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 307
D + +WDTRS +V AH ++VN +S+N + E ++ +G D + +W L+ ++
Sbjct: 889 DGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRH-ENLIVSGGDDGELKIWSLKTIQ 1065
Query: 308 L--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPE 365
+ F+ H I V W PH T +SG D + +WD++ + Q+ + E PP+
Sbjct: 1066FGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWDIATEADGQT--NIEGVPPQ 1239
Query: 366 LLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
L+F+H G ++ + W+ P + + S D
Sbjct: 1240LMFVHMGQN-EVKEVHWHQQIPGLAINTSID 1329
Score = 64.3 bits (155), Expect = 2e-08
Identities = 41/171 (23%), Positives = 78/171 (44%), Gaps = 4/171 (2%)
Frame = +1
Query: 250 QKLMIWDTRSNNT-SKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
+K+ +W + + ++ + H V L+++P +LA+ SAD ++ LWD R+
Sbjct: 751 KKIYLWQMKEGGQWAVGANPLTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPK 930
Query: 309 KLHSF---ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPE 365
++H+ ++ + W+ H E ++ S G D L +W L I + G P
Sbjct: 931 DACVCTVQKAHESDVNVISWNRH-ENLIVSGGDDGELKIWSLKTI---------QFGQPV 1080
Query: 366 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEG 416
LF + H + I+ W+P+E + ED+ +W +A + EG
Sbjct: 1081ALFKY--HNSPITSVDWHPHETTTFMASGEDDQTTIWDIATEADGQTNIEG 1227
>gb|M21696.1|YSCPPG S.cerevisiae phosphoglucoisomerase 1 (PGI1) gene, complete cds
Length = 3791
Score = 106 bits (264), Expect = 5e-21
Identities = 75/261 (28%), Positives = 118/261 (44%), Gaps = 26/261 (9%)
Frame = +3
Query: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD-- 74
+ E Y WKKNT LYD + T++ +WPSLT Q+ PD+ + HR++L + TS
Sbjct: 3006 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDE----HRILLSSFTSSQK 3173
Query: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSV---SGKIEIEIKINH-EGEVNR 129
E + I+ + +++D ++ EF S S + +I I GE NR
Sbjct: 3174 PEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNR 3353
Query: 130 ARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNP--DLRLRGHQ---------- 177
ARY+PQNP IIA + + +FD TKH S + + + +L G
Sbjct: 3354 ARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMD 3533
Query: 178 ------KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTI-FTGHTAVV 230
E L+WN LLS+ + + LWDI + ++D + V
Sbjct: 3534 TSSADINEATSLAWNLQQEALLLSSHSNGQVQLWDIKQYSHENPIIDLPLVSINSDGTAV 3713
Query: 231 EDVSWHLLHESLFGSVADDQK 251
DV+W H+SLF + ++ +
Sbjct: 3714 NDVTWMPTHDSLFAACTEEMR 3776
>gb|AC021043.4|AC021043 Arabidopsis thaliana chromosome I BAC F28N24 genomic sequence, complete
sequence
Length = 154716
Score = 95.5 bits (236), Expect = 9e-18
Identities = 58/186 (31%), Positives = 90/186 (48%)
Frame = -3
Query: 161 PDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAK 220
P PS NP + H +E + +NP L++S D T+ LW A+ + V
Sbjct: 38191 PPPS---NPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLW---AMDRPASV---- 38042
Query: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLS 280
F H V W+ H +F S + D L IWD R ++ + AH E+
Sbjct: 38041 RTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTM---IIPAHDFEILSCD 37871
Query: 281 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 340
+N Y + ILAT S DKTV +WD+R+ ++ L H + +V++SPH +++AS D
Sbjct: 37870 WNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDM 37691
Query: 341 RLNVWD 346
+ +WD
Sbjct: 37690 SVCLWD 37673
Score = 78.2 bits (191), Expect = 2e-12
Identities = 54/211 (25%), Positives = 89/211 (41%)
Frame = -3
Query: 230 VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
V DV W H+S+ + D + I+DT S P S H EV + +NP
Sbjct: 38281 VYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSF 38102
Query: 290 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
T S D TV LW + + + +F+ H ++Q W+P + + AS+ D L +WD+ +
Sbjct: 38101 LTSSWDDTVKLWAM-DRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVRE 37925
Query: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
P I H +I WN + ++ + S D ++VW ++
Sbjct: 37924 --------------PGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVW----DVR 37799
Query: 410 NDEDPEGSVDPEGQGSRRVCTCDPRLSLFSS 440
+ P ++ G R+V R SL +S
Sbjct: 37798 SYRVPLAVLNGHGYAVRKVKFSPHRRSLIAS 37706
Score = 65.1 bits (157), Expect = 1e-08
Identities = 40/165 (24%), Positives = 72/165 (43%)
Frame = -3
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Y WNP SAS D T+ +WD+ + + I H + W+ +
Sbjct: 38011 YQAVWNPKHGDVFASASGDCTLRIWDV-------REPGSTMIIPAHDFEILSCDWNKYDD 37853
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
+ + + D+ + +WD RS P ++ H V + F+P+ ++A+ S D +V L
Sbjct: 37852 CILATSSVDKTVKVWDVRSYRV--PLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCL 37679
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
WD + ++ H + + S E ++AS+G D + VW
Sbjct: 37678 WDYMVEDALVGRYDHHTEFAVGIDMSVLVEGLMASTGWDELVYVW 37544
>ref|NM_102666.1| Arabidopsis thaliana chromosome 1 CHR1v12152001 genomic sequence
Length = 1184
Score = 95.5 bits (236), Expect = 9e-18
Identities = 58/186 (31%), Positives = 90/186 (48%)
Frame = +2
Query: 161 PDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAK 220
P PS NP + H +E + +NP L++S D T+ LW A+ + V
Sbjct: 326 PPPS---NPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLW---AMDRPASV---- 475
Query: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLS 280
F H V W+ H +F S + D L IWD R ++ + AH E+
Sbjct: 476 RTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTM---IIPAHDFEILSCD 646
Query: 281 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 340
+N Y + ILAT S DKTV +WD+R+ ++ L H + +V++SPH +++AS D
Sbjct: 647 WNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDM 826
Query: 341 RLNVWD 346
+ +WD
Sbjct: 827 SVCLWD 844
Score = 78.2 bits (191), Expect = 2e-12
Identities = 54/211 (25%), Positives = 89/211 (41%)
Frame = +2
Query: 230 VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
V DV W H+S+ + D + I+DT S P S H EV + +NP
Sbjct: 236 VYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSF 415
Query: 290 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
T S D TV LW + + + +F+ H ++Q W+P + + AS+ D L +WD+ +
Sbjct: 416 LTSSWDDTVKLWAM-DRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVRE 592
Query: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
P I H +I WN + ++ + S D ++VW ++
Sbjct: 593 --------------PGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVW----DVR 718
Query: 410 NDEDPEGSVDPEGQGSRRVCTCDPRLSLFSS 440
+ P ++ G R+V R SL +S
Sbjct: 719 SYRVPLAVLNGHGYAVRKVKFSPHRRSLIAS 811
Score = 65.1 bits (157), Expect = 1e-08
Identities = 40/165 (24%), Positives = 72/165 (43%)
Frame = +2
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Y WNP SAS D T+ +WD+ + + I H + W+ +
Sbjct: 506 YQAVWNPKHGDVFASASGDCTLRIWDV-------REPGSTMIIPAHDFEILSCDWNKYDD 664
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
+ + + D+ + +WD RS P ++ H V + F+P+ ++A+ S D +V L
Sbjct: 665 CILATSSVDKTVKVWDVRSYRV--PLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCL 838
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
WD + ++ H + + S E ++AS+G D + VW
Sbjct: 839 WDYMVEDALVGRYDHHTEFAVGIDMSVLVEGLMASTGWDELVYVW 973
>gb|AF130973.1|AF130973 Arabidopsis thaliana peroxisomal targeting signal type 2 receptor
(PEX7) mRNA, complete cds
Length = 1184
Score = 95.5 bits (236), Expect = 9e-18
Identities = 58/186 (31%), Positives = 90/186 (48%)
Frame = +2
Query: 161 PDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAK 220
P PS NP + H +E + +NP L++S D T+ LW A+ + V
Sbjct: 326 PPPS---NPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLW---AMDRPASV---- 475
Query: 221 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLS 280
F H V W+ H +F S + D L IWD R ++ + AH E+
Sbjct: 476 RTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTM---IIPAHDFEILSCD 646
Query: 281 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 340
+N Y + ILAT S DKTV +WD+R+ ++ L H + +V++SPH +++AS D
Sbjct: 647 WNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDM 826
Query: 341 RLNVWD 346
+ +WD
Sbjct: 827 SVCLWD 844
Score = 77.8 bits (190), Expect = 2e-12
Identities = 54/211 (25%), Positives = 89/211 (41%)
Frame = +2
Query: 230 VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
V DV W H+S+ + D + I+DT S P S H EV + +NP
Sbjct: 236 VYDVCWSESHDSVLIAANGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSF 415
Query: 290 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
T S D TV LW + + + +F+ H ++Q W+P + + AS+ D L +WD+ +
Sbjct: 416 LTSSWDDTVKLWAM-DRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVRE 592
Query: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIY 409
P I H +I WN + ++ + S D ++VW ++
Sbjct: 593 --------------PGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVW----DVR 718
Query: 410 NDEDPEGSVDPEGQGSRRVCTCDPRLSLFSS 440
+ P ++ G R+V R SL +S
Sbjct: 719 SYRVPLAVLNGHGYAVRKVKFSPHRRSLIAS 811
Score = 65.1 bits (157), Expect = 1e-08
Identities = 40/165 (24%), Positives = 72/165 (43%)
Frame = +2
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHE 240
Y WNP SAS D T+ +WD+ + + I H + W+ +
Sbjct: 506 YQAVWNPKHGDVFASASGDCTLRIWDV-------REPGSTMIIPAHDFEILSCDWNKYDD 664
Query: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
+ + + D+ + +WD RS P ++ H V + F+P+ ++A+ S D +V L
Sbjct: 665 CILATSSVDKTVKVWDVRSYRV--PLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCL 838
Query: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
WD + ++ H + + S E ++AS+G D + VW
Sbjct: 839 WDYMVEDALVGRYDHHTEFAVGIDMSVLVEGLMASTGWDELVYVW 973
>dbj|AP003593.1|AP003593 Nostoc sp. PCC 7120 DNA, complete genome, section 13/19
Length = 333550
Score = 93.2 bits (230), Expect = 5e-17
Identities = 69/233 (29%), Positives = 122/233 (51%)
Frame = +3
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
L+GH ++++P+ L S S D T+ LWDIS+ I GHT+ V
Sbjct: 65964 LQGHTNWVNAVAFSPD-GATLASGSGDQTVRLWDISSSK-------CLYILQGHTSWVNS 66119
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
V ++ S S + DQ + +W+ N+SK + HT+ VN + FNP +LA+G
Sbjct: 66120 VVFNP-DGSTLASGSSDQTVRLWEI---NSSKCLCTFQGHTSWVNSVVFNPDGS-MLASG 66284
Query: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE 352
S+DKTV LWD+ + K LH+F+ H + + V ++P + ++LAS D+ + +W++S
Sbjct: 66285 SSDKTVRLWDISSSKC-LHTFQGHTNWVNSVAFNP-DGSMLASGSGDQTVRLWEISS--- 66449
Query: 353 EQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
+ L GHT+ +S +++P + ++ S S+D +++W ++
Sbjct: 66450 -----------SKCLHTFQGHTSWVSSVTFSP-DGTMLASGSDDQTVRLWSIS 66572
Score = 85.9 bits (211), Expect = 7e-15
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 2/214 (0%)
Frame = +3
Query: 193 LLSASDDHTICLWDISAVPKKGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQ 250
L S SDD T+ LWDIS+ ++T GHT+ V V + ++ S DDQ
Sbjct: 65643 LASGSDDQTVRLWDISS---------GNCLYTLQGHTSCVRSVVFSP-DGAMLASGGDDQ 65792
Query: 251 KLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL 310
+ +WD S N +++ +T+ V L F+P + LA GS+D+ V LWD+ + K L
Sbjct: 65793 IVRLWDISSGNC---LYTLQGYTSWVRFLVFSP-NGVTLANGSSDQIVRLWDISSKKC-L 65957
Query: 311 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIH 370
++ + H + + V +SP T+ + SG D+ + +WD+S + L+I
Sbjct: 65958 YTLQGHTNWVNAVAFSPDGATLASGSG-DQTVRLWDISS--------------SKCLYIL 66092
Query: 371 GGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
GHT+ ++ +NP+ + S S D +++W++
Sbjct: 66093 QGHTSWVNSVVFNPDGS-TLASGSSDQTVRLWEI 66191
Score = 75.1 bits (183), Expect = 1e-11
Identities = 62/231 (26%), Positives = 115/231 (48%)
Frame = +3
Query: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDV 233
+GH +++NP+ S L S S D T+ LW+IS+ K + F GHT+ V V
Sbjct: 66345 QGHTNWVNSVAFNPDGS-MLASGSGDQTVRLWEISS----SKCLHT---FQGHTSWVSSV 66500
Query: 234 SWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 293
++ ++ S +DDQ + +W S ++ HT V + F+P ILA+GS
Sbjct: 66501 TFSP-DGTMLASGSDDQTVRLWSISSGECL---YTFLGHTNWVGSVIFSPDGA-ILASGS 66665
Query: 294 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEE 353
D+TV LW + + K L++ + H + + + +SP + T+LAS D+ + +W++S
Sbjct: 66666 GDQTVRLWSISSGKC-LYTLQGHNNWVGSIVFSP-DGTLLASGSDDQTVRLWNISS---- 66827
Query: 354 QSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
E L+ GH + +++ ++ ++ S S+D +++W +
Sbjct: 66828 ----------GECLYTLHGHINSVRSVAFS-SDGLILASGSDDETIKLWDV 66947
Score = 75.1 bits (183), Expect = 1e-11
Identities = 60/213 (28%), Positives = 103/213 (48%)
Frame = +3
Query: 193 LLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
L S SDD T+ LWDIS+ G+ + F GHT+ V V + + + S + DQ +
Sbjct: 65265 LASGSDDQTVRLWDISS----GQCLKT---FKGHTSRVRSVVFSP-NSLMLASGSSDQTV 65420
Query: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 312
+WD S + HT V ++FN +LATGS D+TV LWD+ + + +
Sbjct: 65421 RLWDISSGECL---YIFQGHTGWVYSVAFN-LDGSMLATGSGDQTVRLWDISSSQC-FYI 65585
Query: 313 FESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGG 372
F+ H + V +S + +LAS D+ + +WD+S L+ G
Sbjct: 65586 FQGHTSCVRSVVFS-SDGAMLASGSDDQTVRLWDISS--------------GNCLYTLQG 65720
Query: 373 HTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
HT+ + ++P+ ++ S +D I+++W ++
Sbjct: 65721 HTSCVRSVVFSPDGA-MLASGGDDQIVRLWDIS 65816
Score = 66.2 bits (160), Expect = 6e-09
Identities = 56/243 (23%), Positives = 109/243 (44%), Gaps = 5/243 (2%)
Frame = +3
Query: 168 NPDLRLRGHQKEGYGLSWNPNLSGHLLSAS---DDHTICLWDISAVPKKGKVVDAKTIFT 224
N LR + S + G +L+ + D D + + + K + T
Sbjct: 65028 NTSLRCVNFTEANLAYSVFTKILGSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLT 65207
Query: 225 --GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
GH + V V + + S +DDQ + +WD S K + HT+ V + F+
Sbjct: 65208 CKGHNSWVNSVGFSQ-DGKMLASGSDDQTVRLWDISSGQCLK---TFKGHTSRVRSVVFS 65375
Query: 283 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
P S +LA+GS+D+TV LWD+ + + L+ F+ H ++ V ++ + SG D+ +
Sbjct: 65376 PNS-LMLASGSSDQTVRLWDISSGEC-LYIFQGHTGWVYSVAFNLDGSMLATGSG-DQTV 65546
Query: 343 NVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
+WD+S + +I GHT+ + ++ ++ ++ S S+D +++W
Sbjct: 65547 RLWDISS--------------SQCFYIFQGHTSCVRSVVFS-SDGAMLASGSDDQTVRLW 65681
Query: 403 QMA 405
++
Sbjct: 65682 DIS 65690
Score = 46.2 bits (108), Expect = 0.006
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 2/143 (1%)
Frame = +3
Query: 164 SGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIF 223
SGEC GH + ++P+ L S S D T+ LW IS+ K ++
Sbjct: 66573 SGECL--YTFLGHTNWVGSVIFSPD-GAILASGSGDQTVRLWSISS---------GKCLY 66716
Query: 224 T--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281
T GH V + + +L S +DDQ + +W+ S H H V ++F
Sbjct: 66717 TLQGHNNWVGSIVFSP-DGTLLASGSDDQTVRLWNISSGECLYTLHG---HINSVRSVAF 66884
Query: 282 NPYSEFILATGSADKTVALWDLR 304
+ ILA+GS D+T+ LWD++
Sbjct: 66885 SS-DGLILASGSDDETIKLWDVK 66950
>gb|AF430070.1|AF430070 Gossypium hirsutum peroxisomal targeting signal 2 receptor mRNA,
complete cds
Length = 1314
Score = 93.2 bits (230), Expect = 5e-17
Identities = 51/184 (27%), Positives = 88/184 (47%)
Frame = +3
Query: 163 PSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTI 222
P NP L+ H +E +GL +NP LSAS D ++ LW + + +T
Sbjct: 351 PPPHSNPLRSLKEHAREVHGLDYNPTRRDSFLSASLDDSVKLWTLD------RPASLRT- 509
Query: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
F H V V+W+ H +F S + D + IWD R ++ + H E+ +N
Sbjct: 510 FREHAYCVYSVAWNPKHADVFASASGDCTVRIWDVREPGSTM---IIPGHEHEILSCDWN 680
Query: 283 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
E ++A+ S DK++ +WD+RN ++ + H + + ++SPH ++ S D +
Sbjct: 681 KCDECLIASASVDKSIKIWDVRNYRVPVSVLNGHGYAVRKFKFSPHRRNLIVSCSYDMTV 860
Query: 343 NVWD 346
+WD
Sbjct: 861 CLWD 872
Score = 80.9 bits (198), Expect = 2e-13
Identities = 47/175 (26%), Positives = 78/175 (43%)
Frame = +3
Query: 230 VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
V DV+W H+S+ + D + ++DT S P S+ H EV+ L +NP
Sbjct: 264 VYDVAWSESHDSVLVAAVADGSIKVYDTAPPPHSNPLRSLKEHAREVHGLDYNPTRRDSF 443
Query: 290 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
+ S D +V LW L + L +F H ++ V W+P + + AS+ D + +WD+ +
Sbjct: 444 LSASLDDSVKLWTL-DRPASLRTFREHAYCVYSVAWNPKHADVFASASGDCTVRIWDVRE 620
Query: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
P I GH +I WN + +I S S D +++W +
Sbjct: 621 --------------PGSTMIIPGHEHEILSCDWNKCDECLIASASVDKSIKIWDV 743
Score = 74.7 bits (182), Expect = 2e-11
Identities = 47/172 (27%), Positives = 76/172 (43%)
Frame = +3
Query: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDV 233
R H Y ++WNP + SAS D T+ +WD+ + + I GH +
Sbjct: 513 REHAYCVYSVAWNPKHADVFASASGDCTVRIWDV-------REPGSTMIIPGHEHEILSC 671
Query: 234 SWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 293
W+ E L S + D+ + IWD R N P ++ H V F+P+ ++ + S
Sbjct: 672 DWNKCDECLIASASVDKSIKIWDVR--NYRVPVSVLNGHGYAVRKFKFSPHRRNLIVSCS 845
Query: 294 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
D TV LWD + ++ H + V S + ++AS+G D + VW
Sbjct: 846 YDMTVCLWDFMIEDALVGRYDHHTEFAVGVDLSVLVDGLMASTGWDELVYVW 1001
>emb|AJ009770.1|HSA9770 Homo sapiens mRNA for putative transcription factor, partial
Length = 1981
Score = 91.7 bits (226), Expect = 1e-16
Identities = 77/247 (31%), Positives = 118/247 (47%), Gaps = 2/247 (0%)
Frame = +1
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
LRGH Y + + SG LLS S+D +I WD+ + ++ GH V D
Sbjct: 25 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNT-------VLYQGHAYPVWD 180
Query: 233 --VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
+S + L+ F S + D+ +W S + + P H A+V+C+ F+P S + LA
Sbjct: 181 LDISPYSLY---FASGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LA 339
Query: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
TGS DKTV LW + + F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 340 TGSTDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLAS- 510
Query: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYN 410
L GHT I+ +++P + +I S S DN ++VW + N Y
Sbjct: 511 -------------GTLYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDI-RNTYC 645
Query: 411 DEDPEGS 417
+GS
Sbjct: 646 SAPADGS 666
>ref|XM_001872.3| Homo sapiens TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor, 65 kD (TAF5L), mRNA
Length = 1959
Score = 91.7 bits (226), Expect = 1e-16
Identities = 77/247 (31%), Positives = 118/247 (47%), Gaps = 2/247 (0%)
Frame = +1
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
LRGH Y + + SG LLS S+D +I WD+ + ++ GH V D
Sbjct: 25 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNT-------VLYQGHAYPVWD 180
Query: 233 --VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
+S + L+ F S + D+ +W S + + P H A+V+C+ F+P S + LA
Sbjct: 181 LDISPYSLY---FASGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LA 339
Query: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
TGS DKTV LW + + F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 340 TGSTDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLAS- 510
Query: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYN 410
L GHT I+ +++P + +I S S DN ++VW + N Y
Sbjct: 511 -------------GTLYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDI-RNTYC 645
Query: 411 DEDPEGS 417
+GS
Sbjct: 646 SAPADGS 666
>ref|NM_014409.1| Homo sapiens TAF5-like RNA polymerase II, p300/CBP-associated factor
(PCAF)-associated factor, 65 kD (TAF5L), mRNA
Length = 1770
Score = 91.7 bits (226), Expect = 1e-16
Identities = 77/247 (31%), Positives = 118/247 (47%), Gaps = 2/247 (0%)
Frame = +1
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
LRGH Y + + SG LLS S+D +I WD+ + ++ GH V D
Sbjct: 1012 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNT-------VLYQGHAYPVWD 1167
Query: 233 --VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
+S + L+ F S + D+ +W S + + P H A+V+C+ F+P S + LA
Sbjct: 1168 LDISPYSLY---FASGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LA 1326
Query: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
TGS DKTV LW + + F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 1327 TGSTDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLAS- 1497
Query: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYN 410
L GHT I+ +++P + +I S S DN ++VW + N Y
Sbjct: 1498 -------------GTLYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDI-RNTYC 1632
Query: 411 DEDPEGS 417
+GS
Sbjct: 1633 SAPADGS 1653
>gb|AF069736.1|AF069736 Homo sapiens PCAF associated factor 65 beta mRNA, complete cds
Length = 1770
Score = 91.7 bits (226), Expect = 1e-16
Identities = 77/247 (31%), Positives = 118/247 (47%), Gaps = 2/247 (0%)
Frame = +1
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
LRGH Y + + SG LLS S+D +I WD+ + ++ GH V D
Sbjct: 1012 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNT-------VLYQGHAYPVWD 1167
Query: 233 --VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
+S + L+ F S + D+ +W S + + P H A+V+C+ F+P S + LA
Sbjct: 1168 LDISPYSLY---FASGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LA 1326
Query: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
TGS DKTV LW + + F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 1327 TGSTDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLAS- 1497
Query: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYN 410
L GHT I+ +++P + +I S S DN ++VW + N Y
Sbjct: 1498 -------------GTLYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDI-RNTYC 1632
Query: 411 DEDPEGS 417
+GS
Sbjct: 1633 SAPADGS 1653
>ref|XM_050783.1| Homo sapiens similar to TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor, 65
kD (H. sapiens) (LOC146638), mRNA
Length = 1050
Score = 91.7 bits (226), Expect = 1e-16
Identities = 77/247 (31%), Positives = 118/247 (47%), Gaps = 2/247 (0%)
Frame = +1
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
LRGH Y + + SG LLS S+D +I WD+ + ++ GH V D
Sbjct: 25 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNT-------VLYQGHAYPVWD 180
Query: 233 --VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
+S + L+ F S + D+ +W S + + P H A+V+C+ F+P S + LA
Sbjct: 181 LDISPYSLY---FASGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LA 339
Query: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
TGS DKTV LW + + F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 340 TGSTDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLAS- 510
Query: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYN 410
L GHT I+ +++P + +I S S DN ++VW + N Y
Sbjct: 511 -------------GTLYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDI-RNTYC 645
Query: 411 DEDPEGS 417
+GS
Sbjct: 646 SAPADGS 666
>gb|BC013550.1|BC013550 Mus musculus, Similar to PCAF associated factor 65 beta, clone
MGC:19341 IMAGE:4222283, mRNA, complete cds
Length = 2900
Score = 90.9 bits (224), Expect = 2e-16
Identities = 73/238 (30%), Positives = 110/238 (45%)
Frame = +2
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
LRGH Y + + SG LLS S+D +I WD+ + ++ GH V D
Sbjct: 1136 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNT-------VLYQGHAYPVWD 1291
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
V F S + D+ +W S + + P H A+V+C+ F+P S + LATG
Sbjct: 1292 VDISPF-SLYFASGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATG 1456
Query: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE 352
S DKTV LW + + F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 1457 STDKTVRLWSAQQGN-SVRLFTGHRGPVLSLSFSP-NGKYLASAGEDQRLKLWDLAS--- 1621
Query: 353 EQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYN 410
L GHT I+ +++P + +I S S DN ++VW + N
Sbjct: 1622 -----------GTLFKELRGHTDSITSLAFSP-DSGLIASASMDNSVRVWDIRSTCCN 1759
>dbj|D30014.1|RICEN20522 Rice mRNA EN205, partial sequence
Length = 335
Score = 89.7 bits (221), Expect = 5e-16
Identities = 42/63 (66%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = +2
Query: 344 VWDLSKIGEEQSPED-AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
VWDLSK+ S AEDGPPELL IHGGHT+KISDFSWNP E +I S +EDNI+Q+W
Sbjct: 104 VWDLSKVFPSNSHRSTAEDGPPELLSIHGGHTSKISDFSWNPCEALLIASFAEDNILQIW 283
Query: 403 QMA 405
Q+A
Sbjct: 284 QLA 292
Score = 48.9 bits (115), Expect = 0.001
Identities = 26/49 (53%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 310 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK-IGEEQSPE 357
LH+F+ HK+E FQV WSP NETILAS RRL + + QSPE
Sbjct: 1 LHTFDCHKEEAFQVGWSPKNETILASCCLGRRLTGLGFKQGFSQ*QSPE 147
>ref|NM_120923.1| Arabidopsis thaliana chromosome 5 CHR5v12152001 genomic sequence
Length = 2616
Score = 89.0 bits (219), Expect = 9e-16
Identities = 77/258 (29%), Positives = 116/258 (44%)
Frame = +1
Query: 146 SSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLW 205
SS VLV H G+ N L L GH ++++ + G + + + TI LW
Sbjct: 361 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDAS-EGLVAAGAASGTIKLW 537
Query: 206 DISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKP 265
D+ ++ KVV TGH + V++H E F S + D L IWD R
Sbjct: 538 DL----EEAKVVRT---LTGHRSNCVSVNFHPFGE-FFASGSLDTNLKIWDIRKKGCI-- 687
Query: 266 SHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQW 325
H+ HT VN L F P +I++ G D V +WDL KL LH F+SH+ +I + +
Sbjct: 688 -HTYKGHTRGVNVLRFTPDGRWIVS-GGEDNVVKVWDLTAGKL-LHEFKSHEGKIQSLDF 858
Query: 326 SPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPN 385
PH E +LA+ D+ + WDL EL+ G T + ++NP+
Sbjct: 859 HPH-EFLLATGSADKTVKFWDLETF--------------ELIGSGGTETTGVRCLTFNPD 993
Query: 386 EPWVICSVSEDNIMQVWQ 403
V+C + E + W+
Sbjct: 994 GKSVLCGLQESLKIFSWE 1047
Score = 68.2 bits (165), Expect = 2e-09
Identities = 45/182 (24%), Positives = 83/182 (44%)
Frame = +1
Query: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
F H+A V + + + +D K+ +W N S+ H++ ++ ++F+
Sbjct: 313 FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAIL---SLYGHSSGIDSVTFD 483
Query: 283 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
SE ++A G+A T+ LWDL K+ + + H+ V + P E AS D L
Sbjct: 484 A-SEGLVAAGAASGTIKLWDLEEAKV-VRTLTGHRSNCVSVNFHPFGE-FFASGSLDTNL 654
Query: 343 NVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
+WD+ K G + + GHT ++ + P+ W++ S EDN+++VW
Sbjct: 655 KIWDIRKKG--------------CIHTYKGHTRGVNVLRFTPDGRWIV-SGGEDNVVKVW 789
Query: 403 QM 404
+
Sbjct: 790 DL 795
>gb|U76560.1|HSU76560 Human peroxisome targeting signal 2 receptor (Pex7) mRNA, complete
cds
Length = 1434
Score = 88.2 bits (217), Expect = 1e-15
Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Frame = +1
Query: 176 HQKEGYGLSWNPNLSGHLL-SASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVS 234
H +E Y + W+ L+ S S D T+ LWD P GK + F GH +++
Sbjct: 376 HAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD----PTVGKSL---CTFRGHESIIYSTI 534
Query: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
W F S + DQ L IWD ++ + AH AE+ + Y+E +L TG+
Sbjct: 535 WSPHIPGCFASASGDQTLRIWDVKAAGVRIV---IPAHQAEILSCDWCKYNENLLVTGAV 705
Query: 295 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ 354
D ++ WDLRN++ + H I +V++SP + ++LAS D + W+ SK
Sbjct: 706 DCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK----- 870
Query: 355 SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
P LL HT ++ P + S D ++++ A
Sbjct: 871 --------PDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYDPA 999
Score = 79.0 bits (193), Expect = 9e-13
Identities = 47/173 (27%), Positives = 78/173 (44%)
Frame = +1
Query: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDV 233
RGH+ Y W+P++ G SAS D T+ +WD+ K + + H A +
Sbjct: 502 RGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV-------KAAGVRIVIPAHQAEILSC 660
Query: 234 SWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 293
W +E+L + A D L WD R N +P + HT + + F+P+ +LA+ S
Sbjct: 661 DWCKYNENLLVTGAVDCSLRGWDLR--NVRQPVFELLGHTYAIRRVKFSPFHASVLASCS 834
Query: 294 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
D TV W+ L + E H + + +S + T +A D + ++D
Sbjct: 835 YDFTVRFWNFSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 993
Score = 72.8 bits (177), Expect = 6e-11
Identities = 54/227 (23%), Positives = 97/227 (41%), Gaps = 1/227 (0%)
Frame = +1
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLH- 239
+ ++W+ N L++ S D ++ LWD + K ++ H V V W
Sbjct: 259 FDVTWSENNEHVLITCSGDGSLQLWDTA------KAAGPLQVYKEHAQEVYSVDWSQTRG 420
Query: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
E L S + DQ + +WD K + H + + ++P+ A+ S D+T+
Sbjct: 421 EQLVVSGSWDQTVKLWDP---TVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLR 591
Query: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA 359
+WD++ +++ +H+ EI W +NE +L + D L WDL + +
Sbjct: 592 IWDVKAAGVRI-VIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVF---- 756
Query: 360 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
ELL GHT I ++P V+ S S D ++ W ++
Sbjct: 757 -----ELL----GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 870
Score = 42.7 bits (99), Expect = 0.071
Identities = 39/162 (24%), Positives = 61/162 (37%), Gaps = 38/162 (23%)
Frame = +1
Query: 281 FNPYSEFILATGSADK-------TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 333
F+PY LA +A T+ + D L+L D +F V WS +NE +L
Sbjct: 118 FSPYLPGRLACATAQHYGIAGCGTLLILDPDEAGLRLFRSFDWNDGLFDVTWSENNEHVL 297
Query: 334 ASSGTDRRLNVWDLSK------IGEEQSPE----DAEDGPPELLFIHG------------ 371
+ D L +WD +K + +E + E D E L + G
Sbjct: 298 ITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPT 477
Query: 372 ---------GHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
GH + I W+P+ P S S D +++W +
Sbjct: 478 VGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV 603
>gb|BC006268.1|BC006268 Homo sapiens, peroxisomal biogenesis factor 7, clone MGC:10385
IMAGE:3948721, mRNA, complete cds
Length = 1113
Score = 88.2 bits (217), Expect = 1e-15
Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Frame = +3
Query: 176 HQKEGYGLSWNPNLSGHLL-SASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVS 234
H +E Y + W+ L+ S S D T+ LWD P GK + F GH +++
Sbjct: 372 HAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD----PTVGKSL---CTFRGHESIIYSTI 530
Query: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
W F S + DQ L IWD ++ + AH AE+ + Y+E +L TG+
Sbjct: 531 WSPHIPGCFASASGDQTLRIWDVKAAGVRIV---IPAHQAEILSCDWCKYNENLLVTGAV 701
Query: 295 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ 354
D ++ WDLRN++ + H I +V++SP + ++LAS D + W+ SK
Sbjct: 702 DCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK----- 866
Query: 355 SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
P LL HT ++ P + S D ++++ A
Sbjct: 867 --------PDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYDPA 995
Score = 79.0 bits (193), Expect = 9e-13
Identities = 47/173 (27%), Positives = 78/173 (44%)
Frame = +3
Query: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDV 233
RGH+ Y W+P++ G SAS D T+ +WD+ K + + H A +
Sbjct: 498 RGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV-------KAAGVRIVIPAHQAEILSC 656
Query: 234 SWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 293
W +E+L + A D L WD R N +P + HT + + F+P+ +LA+ S
Sbjct: 657 DWCKYNENLLVTGAVDCSLRGWDLR--NVRQPVFELLGHTYAIRRVKFSPFHASVLASCS 830
Query: 294 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
D TV W+ L + E H + + +S + T +A D + ++D
Sbjct: 831 YDFTVRFWNFSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 989
Score = 72.8 bits (177), Expect = 6e-11
Identities = 54/227 (23%), Positives = 97/227 (41%), Gaps = 1/227 (0%)
Frame = +3
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLH- 239
+ ++W+ N L++ S D ++ LWD + K ++ H V V W
Sbjct: 255 FDVTWSENNEHVLITCSGDGSLQLWDTA------KAAGPLQVYKEHAQEVYSVDWSQTRG 416
Query: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
E L S + DQ + +WD K + H + + ++P+ A+ S D+T+
Sbjct: 417 EQLVVSGSWDQTVKLWDP---TVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLR 587
Query: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA 359
+WD++ +++ +H+ EI W +NE +L + D L WDL + +
Sbjct: 588 IWDVKAAGVRI-VIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVF---- 752
Query: 360 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
ELL GHT I ++P V+ S S D ++ W ++
Sbjct: 753 -----ELL----GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 866
Score = 42.7 bits (99), Expect = 0.071
Identities = 39/162 (24%), Positives = 61/162 (37%), Gaps = 38/162 (23%)
Frame = +3
Query: 281 FNPYSEFILATGSADK-------TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 333
F+PY LA +A T+ + D L+L D +F V WS +NE +L
Sbjct: 114 FSPYLPGRLACATAQHYGIAGCGTLLILDPDEAGLRLFRSFDWNDGLFDVTWSENNEHVL 293
Query: 334 ASSGTDRRLNVWDLSK------IGEEQSPE----DAEDGPPELLFIHG------------ 371
+ D L +WD +K + +E + E D E L + G
Sbjct: 294 ITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPT 473
Query: 372 ---------GHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
GH + I W+P+ P S S D +++W +
Sbjct: 474 VGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV 599
>ref|NM_000288.1| Homo sapiens peroxisomal biogenesis factor 7 (PEX7), mRNA
Length = 1451
Score = 88.2 bits (217), Expect = 1e-15
Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Frame = +1
Query: 176 HQKEGYGLSWNPNLSGHLL-SASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVS 234
H +E Y + W+ L+ S S D T+ LWD P GK + F GH +++
Sbjct: 409 HAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD----PTVGKSL---CTFRGHESIIYSTI 567
Query: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
W F S + DQ L IWD ++ + AH AE+ + Y+E +L TG+
Sbjct: 568 WSPHIPGCFASASGDQTLRIWDVKAAGVRIV---IPAHQAEILSCDWCKYNENLLVTGAV 738
Query: 295 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ 354
D ++ WDLRN++ + H I +V++SP + ++LAS D + W+ SK
Sbjct: 739 DCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK----- 903
Query: 355 SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
P LL HT ++ P + S D ++++ A
Sbjct: 904 --------PDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYDPA 1032
Score = 79.0 bits (193), Expect = 9e-13
Identities = 47/173 (27%), Positives = 78/173 (44%)
Frame = +1
Query: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDV 233
RGH+ Y W+P++ G SAS D T+ +WD+ K + + H A +
Sbjct: 535 RGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV-------KAAGVRIVIPAHQAEILSC 693
Query: 234 SWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 293
W +E+L + A D L WD R N +P + HT + + F+P+ +LA+ S
Sbjct: 694 DWCKYNENLLVTGAVDCSLRGWDLR--NVRQPVFELLGHTYAIRRVKFSPFHASVLASCS 867
Query: 294 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
D TV W+ L + E H + + +S + T +A D + ++D
Sbjct: 868 YDFTVRFWNFSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 1026
Score = 72.8 bits (177), Expect = 6e-11
Identities = 54/227 (23%), Positives = 97/227 (41%), Gaps = 1/227 (0%)
Frame = +1
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLH- 239
+ ++W+ N L++ S D ++ LWD + K ++ H V V W
Sbjct: 292 FDVTWSENNEHVLITCSGDGSLQLWDTA------KAAGPLQVYKEHAQEVYSVDWSQTRG 453
Query: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
E L S + DQ + +WD K + H + + ++P+ A+ S D+T+
Sbjct: 454 EQLVVSGSWDQTVKLWDP---TVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLR 624
Query: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA 359
+WD++ +++ +H+ EI W +NE +L + D L WDL + +
Sbjct: 625 IWDVKAAGVRI-VIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVF---- 789
Query: 360 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
ELL GHT I ++P V+ S S D ++ W ++
Sbjct: 790 -----ELL----GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 903
Score = 42.7 bits (99), Expect = 0.071
Identities = 39/162 (24%), Positives = 61/162 (37%), Gaps = 38/162 (23%)
Frame = +1
Query: 281 FNPYSEFILATGSADK-------TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 333
F+PY LA +A T+ + D L+L D +F V WS +NE +L
Sbjct: 151 FSPYLPGRLACATAQHYGIAGCGTLLILDPDEAGLRLFRSFDWNDGLFDVTWSENNEHVL 330
Query: 334 ASSGTDRRLNVWDLSK------IGEEQSPE----DAEDGPPELLFIHG------------ 371
+ D L +WD +K + +E + E D E L + G
Sbjct: 331 ITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPT 510
Query: 372 ---------GHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
GH + I W+P+ P S S D +++W +
Sbjct: 511 VGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV 636
>gb|AE003554.2|AE003554 Drosophila melanogaster genomic scaffold 142000013386050 section 14 of
54, complete sequence
Length = 285752
Score = 88.2 bits (217), Expect = 1e-15
Identities = 56/174 (32%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
Frame = +3
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGH-LLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHT 227
P + L+ H+ E Y L W + H LLS S D T+ LWD + ++ T F GH
Sbjct: 33420 PLICLQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKLWDCNRQ-------NSITTFVGHN 33578
Query: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
++ + L +LF SV+ D L +W++ + KP S++AH +E C ++ +
Sbjct: 33579 DLIYGAKFSPLIANLFASVSTDGHLNLWNSL-DFAGKPLMSIEAHASEALCCDWSHFDRN 33755
Query: 288 ILATGSADKTVALWDLRNLKLKLHSFESHKDE--IFQVQWSPHNETILASSGTD 339
+L TG +D + WDLR K++ H FE + E + ++ SPH+ +LAS+ D
Sbjct: 33756 VLVTGGSDGLIRGWDLR--KMRTHVFELYSGEFAVRRLACSPHSAAVLASANYD 33911
Score = 45.4 bits (106), Expect = 0.011
Identities = 42/177 (23%), Positives = 70/177 (38%), Gaps = 7/177 (3%)
Frame = +3
Query: 181 YGLSWNPNLSGHLLSASDDHTICLW---DISAVPKKGKVVDAKTIFTGHTAVVEDVSWHL 237
+ ++W P + +AS D ++ +W D + + H V + W
Sbjct: 33297 FDVAWCPYAADIAATASGDGSLQIWCGLDGESASNQLTPKQPLICLQEHKNEVYSLDWGE 33476
Query: 238 ---LHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
H L GS D L +WD N+ + H + F+P + A+ S
Sbjct: 33477 KWNYHTLLSGSW--DCTLKLWDCNRQNSIT---TFVGHNDLIYGAKFSPLIANLFASVST 33641
Query: 295 DKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
D + LW+ + K L S E+H E WS + +L + G+D + WDL K+
Sbjct: 33642 DGHLNLWNSLDFAGKPLMSIEAHASEALCCDWSHFDRNVLVTGGSDGLIRGWDLRKM 33812
>gb|U88871.1|HSU88871 Human HsPex7p (HsPEX7) mRNA, complete cds
Length = 1451
Score = 88.2 bits (217), Expect = 1e-15
Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Frame = +1
Query: 176 HQKEGYGLSWNPNLSGHLL-SASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVS 234
H +E Y + W+ L+ S S D T+ LWD P GK + F GH +++
Sbjct: 409 HAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD----PTVGKSL---CTFRGHESIIYSTI 567
Query: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
W F S + DQ L IWD ++ + AH AE+ + Y+E +L TG+
Sbjct: 568 WSPHIPGCFASASGDQTLRIWDVKAAGVRIV---IPAHQAEILSCDWCKYNENLLVTGAV 738
Query: 295 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ 354
D ++ WDLRN++ + H I +V++SP + ++LAS D + W+ SK
Sbjct: 739 DCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK----- 903
Query: 355 SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
P LL HT ++ P + S D ++++ A
Sbjct: 904 --------PDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYDPA 1032
Score = 79.0 bits (193), Expect = 9e-13
Identities = 47/173 (27%), Positives = 78/173 (44%)
Frame = +1
Query: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDV 233
RGH+ Y W+P++ G SAS D T+ +WD+ K + + H A +
Sbjct: 535 RGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV-------KAAGVRIVIPAHQAEILSC 693
Query: 234 SWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 293
W +E+L + A D L WD R N +P + HT + + F+P+ +LA+ S
Sbjct: 694 DWCKYNENLLVTGAVDCSLRGWDLR--NVRQPVFELLGHTYAIRRVKFSPFHASVLASCS 867
Query: 294 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
D TV W+ L + E H + + +S + T +A D + ++D
Sbjct: 868 YDFTVRFWNFSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 1026
Score = 72.8 bits (177), Expect = 6e-11
Identities = 54/227 (23%), Positives = 97/227 (41%), Gaps = 1/227 (0%)
Frame = +1
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLH- 239
+ ++W+ N L++ S D ++ LWD + K ++ H V V W
Sbjct: 292 FDVTWSENNEHVLITCSGDGSLQLWDTA------KAAGPLQVYKEHAQEVYSVDWSQTRG 453
Query: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
E L S + DQ + +WD K + H + + ++P+ A+ S D+T+
Sbjct: 454 EQLVVSGSWDQTVKLWDP---TVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLR 624
Query: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA 359
+WD++ +++ +H+ EI W +NE +L + D L WDL + +
Sbjct: 625 IWDVKAAGVRI-VIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVF---- 789
Query: 360 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
ELL GHT I ++P V+ S S D ++ W ++
Sbjct: 790 -----ELL----GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 903
Score = 42.7 bits (99), Expect = 0.071
Identities = 39/162 (24%), Positives = 61/162 (37%), Gaps = 38/162 (23%)
Frame = +1
Query: 281 FNPYSEFILATGSADK-------TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 333
F+PY LA +A T+ + D L+L D +F V WS +NE +L
Sbjct: 151 FSPYLPGRLACATAQHYGIAGCGTLLILDPDEAGLRLFRSFDWNDGLFDVTWSENNEHVL 330
Query: 334 ASSGTDRRLNVWDLSK------IGEEQSPE----DAEDGPPELLFIHG------------ 371
+ D L +WD +K + +E + E D E L + G
Sbjct: 331 ITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPT 510
Query: 372 ---------GHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
GH + I W+P+ P S S D +++W +
Sbjct: 511 VGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV 636
>gb|AC010019.4| Drosophila melanogaster 3L BAC RP98-6F6 (Roswell Park Cancer Institute
Drosophila BAC Library) complete sequence
Length = 195136
Score = 88.2 bits (217), Expect = 1e-15
Identities = 56/174 (32%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
Frame = -3
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGH-LLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHT 227
P + L+ H+ E Y L W + H LLS S D T+ LWD + ++ T F GH
Sbjct: 37523 PLICLQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKLWDCNRQ-------NSITTFVGHN 37365
Query: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
++ + L +LF SV+ D L +W++ + KP S++AH +E C ++ +
Sbjct: 37364 DLIYGAKFSPLIANLFASVSTDGHLNLWNSL-DFAGKPLMSIEAHASEALCCDWSHFDRN 37188
Query: 288 ILATGSADKTVALWDLRNLKLKLHSFESHKDE--IFQVQWSPHNETILASSGTD 339
+L TG +D + WDLR K++ H FE + E + ++ SPH+ +LAS+ D
Sbjct: 37187 VLVTGGSDGLIRGWDLR--KMRTHVFELYSGEFAVRRLACSPHSAAVLASANYD 37032
Score = 45.4 bits (106), Expect = 0.011
Identities = 42/177 (23%), Positives = 70/177 (38%), Gaps = 7/177 (3%)
Frame = -3
Query: 181 YGLSWNPNLSGHLLSASDDHTICLW---DISAVPKKGKVVDAKTIFTGHTAVVEDVSWHL 237
+ ++W P + +AS D ++ +W D + + H V + W
Sbjct: 37646 FDVAWCPYAADIAATASGDGSLQIWCGLDGESASNQLTPKQPLICLQEHKNEVYSLDWGE 37467
Query: 238 ---LHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
H L GS D L +WD N+ + H + F+P + A+ S
Sbjct: 37466 KWNYHTLLSGSW--DCTLKLWDCNRQNSIT---TFVGHNDLIYGAKFSPLIANLFASVST 37302
Query: 295 DKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
D + LW+ + K L S E+H E WS + +L + G+D + WDL K+
Sbjct: 37301 DGHLNLWNSLDFAGKPLMSIEAHASEALCCDWSHFDRNVLVTGGSDGLIRGWDLRKM 37131
>gb|AC024818.1| Caenorhabditis elegans cosmid Y54H5A, complete sequence
Length = 22200
Score = 88.2 bits (217), Expect = 1e-15
Identities = 51/178 (28%), Positives = 90/178 (49%), Gaps = 3/178 (1%)
Frame = +3
Query: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCLS 280
IF + VED++W L S + D + +WDTRS +V AH ++VN +S
Sbjct: 17391 IFQYFSESVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVIS 17570
Query: 281 FNPYSEFILATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGT 338
+N + E ++ +G D + +W L+ ++ + F+ H I V W PH T +SG
Sbjct: 17571 WNRH-ENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGE 17747
Query: 339 DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
D + +WD++ + Q+ + E PP+L+F+H G ++ + W+ P + + S D
Sbjct: 17748 DDQTTIWDIATEADGQT--NIEGVPPQLMFVHMGQN-EVKEVHWHQQIPGLAINTSID 17912
Score = 63.5 bits (153), Expect = 4e-08
Identities = 35/121 (28%), Positives = 57/121 (46%)
Frame = +3
Query: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
L+W+P +G L S S D +I LWD + PK V T+ H + V +SW+ HE+L
Sbjct: 17424 LAWSPTETGLLASCSADGSIKLWDTRSAPKDACVC---TVQKAHESDVNVISWN-RHENL 17591
Query: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 302
S DD +L IW ++ +P H + + + ++P+ D +WD
Sbjct: 17592 IVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWD 17771
Query: 303 L 303
+
Sbjct: 17772 I 17774
Score = 59.7 bits (143), Expect = 6e-07
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Frame = +3
Query: 276 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVQWSPHNETI 332
V L+++P +LA+ SAD ++ LWD R+ ++H+ ++ + W+ H E +
Sbjct: 17415 VEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRH-ENL 17591
Query: 333 LASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 392
+ S G D L +W L I + G P LF + H + I+ W+P+E +
Sbjct: 17592 IVSGGDDGELKIWSLKTI---------QFGQPVALFKY--HNSPITSVDWHPHETTTFMA 17738
Query: 393 VSEDNIMQVWQMAENIYNDEDPEG 416
ED+ +W +A + EG
Sbjct: 17739 SGEDDQTTIWDIATEADGQTNIEG 17810
Score = 39.3 bits (90), Expect = 0.79
Identities = 23/99 (23%), Positives = 46/99 (46%)
Frame = +3
Query: 306 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPE 365
L + + F+ + + + WSP +LAS D + +WD +P+DA
Sbjct: 17373 LSIFQYIFQYFSESVEDLAWSPTETGLLASCSADGSIKLWD-----TRSAPKDA-----C 17522
Query: 366 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
+ + H + ++ SWN +E +I S +D +++W +
Sbjct: 17523 VCTVQKAHESDVNVISWNRHEN-LIVSGGDDGELKIWSL 17636
>emb|AL023833.1|CEY21F11A Caenorhabditis elegans cosmid Y21F11A, complete sequence
Length = 699
Score = 87.0 bits (214), Expect = 3e-15
Identities = 37/47 (78%), Positives = 41/47 (86%)
Frame = -3
Query: 9 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR 55
D E+RV N+EYKIWKKNTPFLYDLVMTHALEWPSL+ QWLPDV +
Sbjct: 172 DGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAK 32
>ref|XM_081279.1| similar to LD24014p (D. melanogaster), mRNA
Length = 2783
Score = 86.7 bits (213), Expect = 4e-15
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 1/230 (0%)
Frame = +1
Query: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDV 233
+ H++ G+S++P S +S SDD T+ +WD ++ + GH A V+ V
Sbjct: 904 QAHKEAIRGISFSPTDS-KFVSGSDDGTLRIWDFMRCQEE-------RVLRGHGADVKCV 1059
Query: 234 SWHLLHESLF-GSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
WH + GS + Q + IWD +S H AH + V L +N + L T
Sbjct: 1060 HWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLH---AHKSTVMDLKWNDNGNW-LVTA 1227
Query: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE 352
S D + L+D+RNL+ ++ F HK E V W P +E + S G+D + W+ +G
Sbjct: 1228 SRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWN---VGT 1398
Query: 353 EQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
++ E+ + H + + +W+P ++CS S D+ ++ W
Sbjct: 1399 DK----------EIGCVETAHDSIVWTLAWHP-LGHILCSGSNDHTIKFW 1515
Score = 58.9 bits (141), Expect = 1e-06
Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 2/185 (1%)
Frame = +1
Query: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281
++ H + +S+ +S F S +DD L IWD + + H A+V C+ +
Sbjct: 898 MYQAHKEAIRGISFSPT-DSKFVSGSDDGTLRIWDFMR---CQEERVLRGHGADVKCVHW 1065
Query: 282 NPYSEFILATGSAD--KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
+P I++ GS D + + +WD ++ + L + +HK + ++W+ + ++ +S D
Sbjct: 1066 HPQKGMIVS-GSKDNQQPIKIWDPKS-GIALATLHAHKSTVMDLKWNDNGNWLVTAS-RD 1236
Query: 340 RRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 399
L ++D+ + EE + GH + S SW+P + CS D +
Sbjct: 1237 HLLKLFDIRNLREEVQ-------------VFRGHKKEASSVSWHPIHEGLFCSGGSDGSI 1377
Query: 400 QVWQM 404
W +
Sbjct: 1378 LFWNV 1392
Score = 45.4 bits (106), Expect = 0.011
Identities = 30/117 (25%), Positives = 53/117 (44%), Gaps = 1/117 (0%)
Frame = +1
Query: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDV 233
RGH+KE +SW+P G S D +I W++ + G V T H ++V +
Sbjct: 1291 RGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVE------TAHDSIVWTL 1452
Query: 234 SWHLLHESLFGSVADDQKLMIWD-TRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
+WH L L S ++D + W R + + ++++ A + L Y + I+
Sbjct: 1453 AWHPLGHILC-SGSNDHTIKFWTRNRPGDLMRDKYNLNTLPASLAALDECEYDDAII 1620
>gb|AY051695.1| Drosophila melanogaster LD24014 full length cDNA
Length = 2740
Score = 86.7 bits (213), Expect = 4e-15
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 1/230 (0%)
Frame = +1
Query: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDV 233
+ H++ G+S++P S +S SDD T+ +WD ++ + GH A V+ V
Sbjct: 841 QAHKEAIRGISFSPTDS-KFVSGSDDGTLRIWDFMRCQEE-------RVLRGHGADVKCV 996
Query: 234 SWHLLHESLF-GSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
WH + GS + Q + IWD +S H AH + V L +N + L T
Sbjct: 997 HWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLH---AHKSTVMDLKWNDNGNW-LVTA 1164
Query: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE 352
S D + L+D+RNL+ ++ F HK E V W P +E + S G+D + W+ +G
Sbjct: 1165 SRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWN---VGT 1335
Query: 353 EQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
++ E+ + H + + +W+P ++CS S D+ ++ W
Sbjct: 1336 DK----------EIGCVETAHDSIVWTLAWHP-LGHILCSGSNDHTIKFW 1452
Score = 58.9 bits (141), Expect = 1e-06
Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 2/185 (1%)
Frame = +1
Query: 222 IFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSF 281
++ H + +S+ +S F S +DD L IWD + + H A+V C+ +
Sbjct: 835 MYQAHKEAIRGISFSPT-DSKFVSGSDDGTLRIWDFMR---CQEERVLRGHGADVKCVHW 1002
Query: 282 NPYSEFILATGSAD--KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
+P I++ GS D + + +WD ++ + L + +HK + ++W+ + ++ +S D
Sbjct: 1003HPQKGMIVS-GSKDNQQPIKIWDPKS-GIALATLHAHKSTVMDLKWNDNGNWLVTAS-RD 1173
Query: 340 RRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 399
L ++D+ + EE + GH + S SW+P + CS D +
Sbjct: 1174HLLKLFDIRNLREEVQ-------------VFRGHKKEASSVSWHPIHEGLFCSGGSDGSI 1314
Query: 400 QVWQM 404
W +
Sbjct: 1315LFWNV 1329
Score = 45.4 bits (106), Expect = 0.011
Identities = 30/117 (25%), Positives = 53/117 (44%), Gaps = 1/117 (0%)
Frame = +1
Query: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDV 233
RGH+KE +SW+P G S D +I W++ + G V T H ++V +
Sbjct: 1228 RGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVE------TAHDSIVWTL 1389
Query: 234 SWHLLHESLFGSVADDQKLMIWD-TRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFIL 289
+WH L L S ++D + W R + + ++++ A + L Y + I+
Sbjct: 1390 AWHPLGHILC-SGSNDHTIKFWTRNRPGDLMRDKYNLNTLPASLAALDECEYDDAII 1557
>gb|U75309.1|HSU75309 Human TBP-associated factor (hTAFII100) mRNA, partial cds
Length = 2443
Score = 84.7 bits (208), Expect = 2e-14
Identities = 69/233 (29%), Positives = 110/233 (46%), Gaps = 3/233 (1%)
Frame = +1
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
L GH YG S++P+ + +LLS+S+D T+ LW + + + GH V D
Sbjct: 1618 LYGHSGPVYGASFSPDRN-YLLSSSEDGTVRLWSL-------QTFTCLVGYKGHNYPVWD 1773
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
+ + F S D+ +W T + +P H A+VNC F+P S ++ ATG
Sbjct: 1774 TQFSP-YGYYFVSGGHDRVARLWAT---DHYQPLRIFAGHLADVNCTRFHPNSNYV-ATG 1938
Query: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS---K 349
SAD+TV LWD+ N + F HK I + +SP N LA+ TD R+ +WD+
Sbjct: 1939 SADRTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLM 2112
Query: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
+GE + GHT + ++ + ++ S S DN +++W
Sbjct: 2113 VGELK-----------------GHTDTVCSLRFS-RDGEILASGSMDNTVRLW 2217
Score = 47.0 bits (110), Expect = 0.004
Identities = 39/128 (30%), Positives = 60/128 (46%)
Frame = +1
Query: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVS 234
GH + ++PN S ++ + S D T+ LWD+ G V IFTGH + ++
Sbjct: 1876 GHLADVNCTRFHPN-SNYVATGSADRTVRLWDVL----NGNCV---RIFTGHKGPIHSLT 2031
Query: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
+ + + A D ++++WD + HT V L F+ E ILA+GS
Sbjct: 2032 FSP-NGRFLATGATDGRVLLWDI---GHGLMVGELKGHTDTVCSLRFSRDGE-ILASGSM 2196
Query: 295 DKTVALWD 302
D TV LWD
Sbjct: 2197 DNTVRLWD 2220
>gb|AF315714.1|AF315714 Ipomoea nil COP1 mRNA, complete cds
Length = 2312
Score = 84.7 bits (208), Expect = 2e-14
Identities = 72/267 (26%), Positives = 123/267 (45%)
Frame = +3
Query: 139 IIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASD 198
+ AT S + VFD++ ++P C P + + K LSWN H+ S+
Sbjct: 1206 LFATAGVSRRIKVFDFSSVVNEP-ADAHC-PVVEMSTRSKLSC-LSWNKYTKNHIASSDY 1376
Query: 199 DHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR 258
D + +WD++ + V++ + H V + S+ S +DD K+ +W T+
Sbjct: 1377 DGIVTVWDVTT---RQSVME----YEEHEKRAWSVDFSRTDPSMLVSGSDDCKVKVWCTK 1535
Query: 259 SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD 318
++ ++D A + C+ +NP S F +A GSAD + +DLRN LH F HK
Sbjct: 1536 QEASAL---NIDMK-ANICCVKYNPGSSFHVAVGSADHHIHYYDLRNTSAPLHIFSGHKK 1703
Query: 319 EIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKIS 378
+ V++ +E LAS+ TD L +WD+ +D P +F GHT + +
Sbjct: 1704 AVSYVKFLSSHE--LASASTDSTLRLWDV------------KDNSPVRVF--RGHTNEKN 1835
Query: 379 DFSWNPNEPWVICSVSEDNIMQVWQMA 405
+ + ++ C SE N + V+ A
Sbjct: 1836 FVGLSVSNEFISCG-SETNEVFVYHKA 1913
>ref|NM_006951.1| Homo sapiens TATA box binding protein (TBP)-associated factor, RNA
polymerase II, D, 100kD (TAF2D), mRNA
Length = 3089
Score = 84.7 bits (208), Expect = 2e-14
Identities = 69/233 (29%), Positives = 110/233 (46%), Gaps = 3/233 (1%)
Frame = +3
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
L GH YG S++P+ + +LLS+S+D T+ LW + + + GH V D
Sbjct: 1638 LYGHSGPVYGASFSPDRN-YLLSSSEDGTVRLWSL-------QTFTCLVGYKGHNYPVWD 1793
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
+ + F S D+ +W T + +P H A+VNC F+P S ++ ATG
Sbjct: 1794 TQFSP-YGYYFVSGGHDRVARLWAT---DHYQPLRIFAGHLADVNCTRFHPNSNYV-ATG 1958
Query: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS---K 349
SAD+TV LWD+ N + F HK I + +SP N LA+ TD R+ +WD+
Sbjct: 1959 SADRTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLM 2132
Query: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
+GE + GHT + ++ + ++ S S DN +++W
Sbjct: 2133 VGELK-----------------GHTDTVCSLRFS-RDGEILASGSMDNTVRLW 2237
Score = 47.0 bits (110), Expect = 0.004
Identities = 39/128 (30%), Positives = 60/128 (46%)
Frame = +3
Query: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVS 234
GH + ++PN S ++ + S D T+ LWD+ G V IFTGH + ++
Sbjct: 1896 GHLADVNCTRFHPN-SNYVATGSADRTVRLWDVL----NGNCV---RIFTGHKGPIHSLT 2051
Query: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
+ + + A D ++++WD + HT V L F+ E ILA+GS
Sbjct: 2052 FSP-NGRFLATGATDGRVLLWDI---GHGLMVGELKGHTDTVCSLRFSRDGE-ILASGSM 2216
Query: 295 DKTVALWD 302
D TV LWD
Sbjct: 2217 DNTVRLWD 2240
>emb|X95525.1|HSTAFII10 H.sapiens mRNA for TAFII100 protein
Length = 3089
Score = 84.7 bits (208), Expect = 2e-14
Identities = 69/233 (29%), Positives = 110/233 (46%), Gaps = 3/233 (1%)
Frame = +3
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
L GH YG S++P+ + +LLS+S+D T+ LW + + + GH V D
Sbjct: 1638 LYGHSGPVYGASFSPDRN-YLLSSSEDGTVRLWSL-------QTFTCLVGYKGHNYPVWD 1793
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
+ + F S D+ +W T + +P H A+VNC F+P S ++ ATG
Sbjct: 1794 TQFSP-YGYYFVSGGHDRVARLWAT---DHYQPLRIFAGHLADVNCTRFHPNSNYV-ATG 1958
Query: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS---K 349
SAD+TV LWD+ N + F HK I + +SP N LA+ TD R+ +WD+
Sbjct: 1959 SADRTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLM 2132
Query: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
+GE + GHT + ++ + ++ S S DN +++W
Sbjct: 2133 VGELK-----------------GHTDTVCSLRFS-RDGEILASGSMDNTVRLW 2237
Score = 47.0 bits (110), Expect = 0.004
Identities = 39/128 (30%), Positives = 60/128 (46%)
Frame = +3
Query: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVS 234
GH + ++PN S ++ + S D T+ LWD+ G V IFTGH + ++
Sbjct: 1896 GHLADVNCTRFHPN-SNYVATGSADRTVRLWDVL----NGNCV---RIFTGHKGPIHSLT 2051
Query: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
+ + + A D ++++WD + HT V L F+ E ILA+GS
Sbjct: 2052 FSP-NGRFLATGATDGRVLLWDI---GHGLMVGELKGHTDTVCSLRFSRDGE-ILASGSM 2216
Query: 295 DKTVALWD 302
D TV LWD
Sbjct: 2217 DNTVRLWD 2240
>gb|U80191.1|HSU80191 Human TFIID subunit TAFII100 mRNA, complete cds
Length = 2751
Score = 84.7 bits (208), Expect = 2e-14
Identities = 69/233 (29%), Positives = 110/233 (46%), Gaps = 3/233 (1%)
Frame = +3
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
L GH YG S++P+ + +LLS+S+D T+ LW + + + GH V D
Sbjct: 1629 LYGHSGPVYGASFSPDRN-YLLSSSEDGTVRLWSL-------QTFTCLVGYKGHNYPVWD 1784
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
+ + F S D+ +W T + +P H A+VNC F+P S ++ ATG
Sbjct: 1785 TQFSP-YGYYFVSGGHDRVARLWAT---DHYQPLRIFAGHLADVNCTRFHPNSNYV-ATG 1949
Query: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS---K 349
SAD+TV LWD+ N + F HK I + +SP N LA+ TD R+ +WD+
Sbjct: 1950 SADRTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLM 2123
Query: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
+GE + GHT + ++ + ++ S S DN +++W
Sbjct: 2124 VGELK-----------------GHTDTVCSLRFS-RDGEILASGSMDNTVRLW 2228
Score = 47.0 bits (110), Expect = 0.004
Identities = 39/128 (30%), Positives = 60/128 (46%)
Frame = +3
Query: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVS 234
GH + ++PN S ++ + S D T+ LWD+ G V IFTGH + ++
Sbjct: 1887 GHLADVNCTRFHPN-SNYVATGSADRTVRLWDVL----NGNCV---RIFTGHKGPIHSLT 2042
Query: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
+ + + A D ++++WD + HT V L F+ E ILA+GS
Sbjct: 2043 FSP-NGRFLATGATDGRVLLWDI---GHGLMVGELKGHTDTVCSLRFSRDGE-ILASGSM 2207
Query: 295 DKTVALWD 302
D TV LWD
Sbjct: 2208 DNTVRLWD 2231
>ref|XM_031978.3| Homo sapiens TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 100 kD (TAF5), mRNA
Length = 3083
Score = 84.7 bits (208), Expect = 2e-14
Identities = 69/233 (29%), Positives = 110/233 (46%), Gaps = 3/233 (1%)
Frame = +3
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
L GH YG S++P+ + +LLS+S+D T+ LW + + + GH V D
Sbjct: 1638 LYGHSGPVYGASFSPDRN-YLLSSSEDGTVRLWSL-------QTFTCLVGYKGHNYPVWD 1793
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
+ + F S D+ +W T + +P H A+VNC F+P S ++ ATG
Sbjct: 1794 TQFSP-YGYYFVSGGHDRVARLWAT---DHYQPLRIFAGHLADVNCTRFHPNSNYV-ATG 1958
Query: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS---K 349
SAD+TV LWD+ N + F HK I + +SP N LA+ TD R+ +WD+
Sbjct: 1959 SADRTVRLWDVLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLM 2132
Query: 350 IGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
+GE + GHT + ++ + ++ S S DN +++W
Sbjct: 2133 VGELK-----------------GHTDTVCSLRFS-RDGEILASGSMDNTVRLW 2237
Score = 47.0 bits (110), Expect = 0.004
Identities = 39/128 (30%), Positives = 60/128 (46%)
Frame = +3
Query: 175 GHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVS 234
GH + ++PN S ++ + S D T+ LWD+ G V IFTGH + ++
Sbjct: 1896 GHLADVNCTRFHPN-SNYVATGSADRTVRLWDVL----NGNCV---RIFTGHKGPIHSLT 2051
Query: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
+ + + A D ++++WD + HT V L F+ E ILA+GS
Sbjct: 2052 FSP-NGRFLATGATDGRVLLWDI---GHGLMVGELKGHTDTVCSLRFSRDGE-ILASGSM 2216
Query: 295 DKTVALWD 302
D TV LWD
Sbjct: 2217 DNTVRLWD 2240
>gb|L24437.1|ATHCOP1A Arabidopsis thaliana (COP1) regulatory protein, complete cds
Length = 2331
Score = 84.3 bits (207), Expect = 2e-14
Identities = 71/264 (26%), Positives = 120/264 (44%)
Frame = +1
Query: 139 IIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASD 198
+ AT S + VFD++ ++P +C P + + K LSWN + H+ S+
Sbjct: 1195 LFATAGVSRCIKVFDFSSFVNEPADM-QC-PIVEMSTRSKLSC-LSWNKHEKNHIASSDY 1365
Query: 199 DHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR 258
+ + +WD++ + + + H V + S+ S +DD K+ +W TR
Sbjct: 1366 EGIVTVWDVTTRQSRME-------YEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTR 1524
Query: 259 SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD 318
+ ++D A + C+ +NP S +A GSAD + +DLRN+ LH F HK
Sbjct: 1525 QEASVI---NIDMK-ANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKK 1692
Query: 319 EIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKIS 378
+ V++ +NE LAS+ TD L +WD+ +D P F GHT + +
Sbjct: 1693 AVSYVKFLSNNE--LASASTDSTLRLWDV------------KDNLPVRTF--RGHTNEKN 1824
Query: 379 DFSWNPNEPWVICSVSEDNIMQVW 402
N ++ C SE N + V+
Sbjct: 1825 FVGLTVNSEYLACG-SETNEVYVY 1893
>gb|AF250048.1|AF250048 Zea mays WD-repeat protein RBAP2 (rbap2) gene, partial cds
Length = 851
Score = 84.3 bits (207), Expect = 2e-14
Identities = 62/168 (36%), Positives = 83/168 (48%), Gaps = 5/168 (2%)
Frame = +2
Query: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE- 75
++E Y WK P LYD H L WPSL+ +W P + K+ RL L T
Sbjct: 335 VDERYPQWKSLIPVLYDWFANHNLVWPSLSCRWGPQFEKATYKNRQ--RLYLSEQTDGSV 508
Query: 76 QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
N LVIA+ ++ P A S ++ E + S ++ I H GEVNR R +
Sbjct: 509 PNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKYKTIVHPGEVNRIREL 664
Query: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSG--ECNPDLRLRGHQKE 179
PQN IIAT T S DVLV+D P++ G E PDL L GH+++
Sbjct: 665 PQNSKIIATHTDSPDVLVWDVEAQPNRHAVLGASESRPDLILTGHKED 808
>ref|NM_122250.1| Arabidopsis thaliana chromosome 5 CHR5v12152001 genomic sequence
Length = 2769
Score = 84.3 bits (207), Expect = 2e-14
Identities = 76/258 (29%), Positives = 114/258 (43%)
Frame = +1
Query: 146 SSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLW 205
SS VLV H G+ N L L GH ++++ + + + + TI LW
Sbjct: 82 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDAS-EVLVAAGAASGTIKLW 258
Query: 206 DISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKP 265
D+ ++ K+V TGH + V +H E F S + D L IWD R
Sbjct: 259 DL----EEAKIVRT---LTGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRKKGCI-- 408
Query: 266 SHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQW 325
H+ HT VN L F P ++++ G D V +WDL KL L F+SH+ +I + +
Sbjct: 409 -HTYKGHTRGVNVLRFTPDGRWVVS-GGEDNIVKVWDLTAGKL-LTEFKSHEGQIQSLDF 579
Query: 326 SPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPN 385
PH E +LA+ DR + WDL EL+ G TA + S+NP+
Sbjct: 580 HPH-EFLLATGSADRTVKFWDLETF--------------ELIGSGGPETAGVRCLSFNPD 714
Query: 386 EPWVICSVSEDNIMQVWQ 403
V+C + E + W+
Sbjct: 715 GKTVLCGLQESLKIFSWE 768
Score = 70.5 bits (171), Expect = 3e-10
Identities = 47/182 (25%), Positives = 83/182 (44%)
Frame = +1
Query: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
F H+A V + + + +D K+ +W N S+ H++ ++ ++F+
Sbjct: 34 FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAIL---SLYGHSSGIDSVTFD 204
Query: 283 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
SE ++A G+A T+ LWDL K+ + + H+ V + P E AS D L
Sbjct: 205 A-SEVLVAAGAASGTIKLWDLEEAKI-VRTLTGHRSNCISVDFHPFGE-FFASGSLDTNL 375
Query: 343 NVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
+WD+ K G + + GHT ++ + P+ WV+ S EDNI++VW
Sbjct: 376 KIWDIRKKG--------------CIHTYKGHTRGVNVLRFTPDGRWVV-SGGEDNIVKVW 510
Query: 403 QM 404
+
Sbjct: 511 DL 516
>dbj|AP003581.1|AP003581 Nostoc sp. PCC 7120 DNA, complete genome, section 1/19
Length = 348050
Score = 84.0 bits (206), Expect = 3e-14
Identities = 69/245 (28%), Positives = 122/245 (49%), Gaps = 4/245 (1%)
Frame = +2
Query: 164 SGECNPDLRLRGHQKEGYGLSWNPNLSGHLL-SASDDHTICLWDISAVPKKGKVVDAKTI 222
+GEC L ++ Y ++++P+ G +L SAS D TI LWDI+ + +
Sbjct: 26372 TGECLKTLSKNTNKV--YSVAFSPD--GRILASASQDQTIKLWDIA-------TGNCQQT 26518
Query: 223 FTGHTAVVEDVSWHLLHES---LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCL 279
GH V V++ + + L S + DQ + +WD T K ++ HT EV+ +
Sbjct: 26519 LIGHDDWVWSVTFSPVTDDRPLLLASSSADQHIKLWDVA---TGKCLKTLKGHTREVHSV 26689
Query: 280 SFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
SF+P + LA+ D TV LWD++ + FE H +++ V++SP +T LAS G D
Sbjct: 26690 SFSPDGQ-TLASSGEDSTVRLWDVKTGQC-WQIFEGHSKKVYSVRFSPDGQT-LASCGED 26860
Query: 340 RRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 399
R + +WD+ + E + GH++++ +++P+ +I S S+D
Sbjct: 26861 RSIKLWDIQR--------------GECVNTLWGHSSQVWAIAFSPDGRTLI-SCSDDQTA 26995
Query: 400 QVWQM 404
++W +
Sbjct: 26996 RLWDV 27010
Score = 80.9 bits (198), Expect = 2e-13
Identities = 63/231 (27%), Positives = 119/231 (51%), Gaps = 1/231 (0%)
Frame = -3
Query: 173 LRGHQKEGYGLSWNPNLSGHLL-SASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVE 231
L+GH + +S++PN G ++ S S DHTI LW + GK++ GH+ V
Sbjct: 318069 LKGHDQGVKSVSFSPN--GEIIASGSSDHTINLWS-----RAGKLL---LSLNGHSQGVN 317920
Query: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
+ + +++ S +DD + +W +P ++ +HT +V ++F+P + I++
Sbjct: 317919 SIKFSPEGDTI-ASASDDGTIRLWSL----DGRPLITIPSHTKQVLAVTFSPDGQTIVSA 317755
Query: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
G AD TV LW RN L L + E H + ++QV +SP ++A++ D+ + +W
Sbjct: 317754 G-ADNTVKLWS-RNGTL-LTTLEGHNEAVWQVIFSPDGR-LIATASADKTITLW------ 317605
Query: 352 EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
+ DG +L GH +++ S++P+ ++ S S+DN +++W
Sbjct: 317604 -------SRDG--NILGTFAGHNHEVNSLSFSPDGN-ILASGSDDNTVRLW 317482
Score = 80.1 bits (196), Expect = 4e-13
Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 4/258 (1%)
Frame = +2
Query: 165 GECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFT 224
GEC L GH + + ++++P+ L+S SDD T LWD+ ++ I
Sbjct: 26891 GECVNTLW--GHSSQVWAIAFSPD-GRTLISCSDDQTARLWDVITG-------NSLNILR 27040
Query: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY 284
G+T V V++ + S DD + +W+ ++ H + H + ++F+P
Sbjct: 27041 GYTRDVYSVAFSP-DSQILASGRDDYTIGLWNLKTGEC----HPLRGHQGRIRSVAFHPD 27205
Query: 285 SEFILATGSADKTVALWDL--RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
+ ILA+GSAD T+ LWD+ N + + H + ++ V +SP T LASS DR +
Sbjct: 27206 GK-ILASGSADNTIKLWDISDTNHSKYIRTLTGHTNWVWTVVFSPDKHT-LASSSEDRTI 27379
Query: 343 NVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
+WD +D D +L GH+ + +++P + ++ S S D+ +++W
Sbjct: 27380 RLWD----------KDTGDCLQKL----KGHSHWVWTVAFSP-DGRILASGSADSEIKIW 27514
Query: 403 QMAEN--IYNDEDPEGSV 418
+A + DP+G +
Sbjct: 27515 DVASGKCLQTLTDPQGMI 27568
Score = 76.3 bits (186), Expect = 6e-12
Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 1/243 (0%)
Frame = +2
Query: 164 SGECNPDLRLRGHQKEGYGLSWNPNLSGHLL-SASDDHTICLWDISAVPKKGKVVDAKTI 222
+GEC+P LRGHQ ++++P+ G +L S S D+TI LWDIS +
Sbjct: 27140 TGECHP---LRGHQGRIRSVAFHPD--GKILASGSADNTIKLWDISDTNHSKYI----RT 27292
Query: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
TGHT V V + +L S ++D+ + +WD +T + H+ V ++F+
Sbjct: 27293 LTGHTNWVWTVVFSPDKHTLASS-SEDRTIRLWD---KDTGDCLQKLKGHSHWVWTVAFS 27460
Query: 283 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
P ILA+GSAD + +WD+ + K L + + I+ V +S T+LAS+ D+ +
Sbjct: 27461 PDGR-ILASGSADSEIKIWDVASGKC-LQTLTDPQGMIWSVAFSLDG-TLLASASEDQTV 27631
Query: 343 NVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVW 402
+W+L K G E + GH ++ +++PN + S SED +++W
Sbjct: 27632 KLWNL-KTG-------------ECVHTLKGHEKQVYSVAFSPNGQ-IAASGSEDTTVKLW 27766
Query: 403 QMA 405
++
Sbjct: 27767 DIS 27775
Score = 72.4 bits (176), Expect = 8e-11
Identities = 68/243 (27%), Positives = 121/243 (48%), Gaps = 9/243 (3%)
Frame = +1
Query: 171 LRLRGHQKEGYG-----LSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTG 225
L L+GH K + ++++PN L SASDD TI LWD++ G + A FTG
Sbjct: 264559 LILKGHGKSSWSGGVNSIAFSPN-GKTLASASDDKTIKLWDVNT----GAEIIA---FTG 264714
Query: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
H V VS+ ++L S + D+ + +W S T + +S+ H +V ++F+P
Sbjct: 264715 HEEAVYSVSFSPDGKTLV-SGSKDKSVKLW---SLATGRELYSLKGHLDDVLSVAFSPDG 264882
Query: 286 EFILATGSA-DKTVALWDLRNLKLKLHSFESHKD---EIFQVQWSPHNETILASSGTDRR 341
+ + + G+ DKT+ +W L K K+ + H + I + +SP + ILAS D+
Sbjct: 264883 QVVASGGAGNDKTIKIWHL--AKQKVQTITGHSEWFGGINSLAFSP-DGNILASGSWDKN 265053
Query: 342 LNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQV 401
+ +W + Q+ E+ + GH+ + S++PN ++ S S+D +++
Sbjct: 265054 IKLW------QWQNSEE--------ICTLTGHSDHVCCVSFSPNGN-ILASASKDKSIKL 265188
Query: 402 WQM 404
WQ+
Sbjct: 265189 WQV 265197
Score = 68.2 bits (165), Expect = 2e-09
Identities = 56/175 (32%), Positives = 89/175 (50%)
Frame = -1
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
L GH E ++++P+ L S S D+T+ +W G+++ K I TGH +
Sbjct: 311735 LTGHNDEVTSVNFSPD-GQFLASGSTDNTVKIWQTD-----GRLI--KNI-TGHGLAIAS 311583
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
V + +L S + D + +W K ++++ H V LSF+P E ILA+G
Sbjct: 311582 VKFSPDSHTL-ASASWDNTIKLWQVTDG---KLINNLNGHIDGVTSLSFSPDGE-ILASG 311418
Query: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
SAD T+ LW+L N L L + H +I + +SP +T+L S G D + VW+L
Sbjct: 311417 SADNTIKLWNLPNATL-LKTLLGHPGKINTLAFSPDGKTLL-SGGEDAGVMVWNL 311259
Score = 65.5 bits (158), Expect = 1e-08
Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 1/185 (0%)
Frame = +2
Query: 164 SGECNPDLRLRGHQKEGYGLSWNPNLSGHLL-SASDDHTICLWDISAVPKKGKVVDAKTI 222
+G+C +L+GH + ++++P+ G +L S S D I +WD+++ GK + T
Sbjct: 27398 TGDCLQ--KLKGHSHWVWTVAFSPD--GRILASGSADSEIKIWDVAS----GKCLQTLTD 27553
Query: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
G ++ V++ L +L S ++DQ + +W+ + T + H++ H +V ++F+
Sbjct: 27554 PQG---MIWSVAFSL-DGTLLASASEDQTVKLWNLK---TGECVHTLKGHEKQVYSVAFS 27712
Query: 283 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
P + I A+GS D TV LWD+ H I V +SP +LAS D ++
Sbjct: 27713 PNGQ-IAASGSEDTTVKLWDISTGSCVDTLKHGHTAAIRSVAFSPDGR-LLASGSEDEKI 27886
Query: 343 NVWDL 347
+WD+
Sbjct: 27887 QLWDM 27901
Score = 63.5 bits (153), Expect = 4e-08
Identities = 66/278 (23%), Positives = 116/278 (40%), Gaps = 45/278 (16%)
Frame = -1
Query: 172 RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISA---------------------- 209
RL+GH ++ +S++P+ L SASDD T+ LWDI
Sbjct: 313007 RLQGHAQQVNAVSFSPD-GKVLASASDDRTVKLWDIHGQLITTITASQKRVTAIAFSHNG 312831
Query: 210 -----------------------VPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSV 246
V K + F GHT +V DV + +++ S
Sbjct: 312830 KYLATANADYTIKLYALDTSCLIVNNLQKCIQLIKTFPGHTDIVTDVVFSPDSKTIVSS- 312654
Query: 247 ADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
+ D+ + +W + ++ +AH VN +SF+P + I A+G D V LW N
Sbjct: 312653 SLDKTIKLWRIDGSII----NTWNAHNGWVNSISFSPDGKMI-ASGGEDNLVKLWQATNG 312489
Query: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
L + + HK+ I V++SP + ILAS+ D+ + W+ DG +
Sbjct: 312488 HL-IKTLTGHKERITSVKFSPDGK-ILASASGDKTIKFWN-------------TDG--KF 312360
Query: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
L H +++ +++ + ++ S D+ M+VW++
Sbjct: 312359 LKTIAAHNQQVNSINFSSDSKTLV-SAGADSTMKVWKI 312249
Score = 62.8 bits (151), Expect = 7e-08
Identities = 71/265 (26%), Positives = 122/265 (45%), Gaps = 30/265 (11%)
Frame = -3
Query: 175 GHQKEGYGLSWNPNLSGHLL-SASDDHTICLWDIS-AVPK-----KGKVVDAKTIFTGH- 226
GH E LS++P+ G++L S SDD+T+ LW ++ +PK KG V + G
Sbjct: 317571 GHNHEVNSLSFSPD--GNILASGSDDNTVRLWTVNRTLPKTFYGHKGSVSYVRFSNDGKK 317398
Query: 227 -TAVVEDVS---WHL---LHESLFGSVADDQKLMIW-DTRSNNTSKPSH----------- 267
T++ D + W L L ++L + D + D + + P H
Sbjct: 317397 ITSLSTDSTMKTWSLDGKLLQTLSSPLPDVTSISFTPDNKIVALASPDHTIHLYNRQGGL 317218
Query: 268 --SVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQW 325
S+ H + LSF+P + ILA+GSADKT+ LW + LK + H + +++
Sbjct: 317217 LRSLPGHNHWITSLSFSPNKQ-ILASGSADKTIKLWSVNGRLLK--TLLGHNGWVTDIKF 317047
Query: 326 SPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPN 385
S + I+++S D+ + +W L DG L+ GH+A + + +P
Sbjct: 317046 SADGKNIVSAS-ADKTIKIWSL-------------DG--RLIRTLQGHSASVWSVNLSP- 316918
Query: 386 EPWVICSVSEDNIMQVWQM-AENIY 409
+ + S S+D +++W + E IY
Sbjct: 316917 DGQTLASTSQDETIKLWNLNGELIY 316843
Score = 62.0 bits (149), Expect = 1e-07
Identities = 45/161 (27%), Positives = 81/161 (49%)
Frame = -1
Query: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 302
F S D + IW + S S ++ + + +S++P + I AT SAD T+ LWD
Sbjct: 312062 FASAGWDGNITIWQRETLAHSSLS-TIQKNQNIITTVSYSPDGKTI-ATASADNTIKLWD 311889
Query: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 362
+ +L + + HKD I + + P N+TI AS D+ + +W ++ DG
Sbjct: 311888 SQTQQL-IKTLTGHKDRITTLSFHPDNQTI-ASGSADKTIKIWRVN------------DG 311751
Query: 363 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
+LL GH +++ +++P+ + + S S DN +++WQ
Sbjct: 311750 --QLLRTLTGHNDEVTSVNFSPDGQF-LASGSTDNTVKIWQ 311637
Score = 61.2 bits (147), Expect = 2e-07
Identities = 53/179 (29%), Positives = 87/179 (47%)
Frame = -3
Query: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
H A V VS+ E + S + D + +W K ++ H VN +SF+P
Sbjct: 318306 HNAWVTSVSYSPDGE-VIASGSVDNTIHLW----RRDGKLLTTLTGHNDGVNSVSFSPDG 318142
Query: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
E ILA+ SAD T+ LW RN +L + + + H + V +SP+ E I+AS +D +N+W
Sbjct: 318141 E-ILASASADSTIKLWQ-RNGQL-ITTLKGHDQGVKSVSFSPNGE-IIASGSSDHTINLW 317974
Query: 346 DLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
S+ G +LL GH+ ++ ++P E I S S+D +++W +
Sbjct: 317973 --SRAG-------------KLLLSLNGHSQGVNSIKFSP-EGDTIASASDDGTIRLWSL 317845
Score = 61.2 bits (147), Expect = 2e-07
Identities = 49/159 (30%), Positives = 84/159 (52%)
Frame = -3
Query: 192 HLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQK 251
+++SAS D TI +W + G+++ GH+A V V+ ++L S + D+
Sbjct: 317031 NIVSASADKTIKIWSLD-----GRLIRT---LQGHSASVWSVNLSPDGQTL-ASTSQDET 316879
Query: 252 LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH 311
+ +W N + +++ H+ V LSF+P + I A+ S D T+ LW++ N L L
Sbjct: 316878 IKLW----NLNGELIYTLRGHSDVVYNLSFSPDGKTI-ASASDDGTIKLWNVPNGTL-LK 316717
Query: 312 SFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
+F+ H+ + V +SP + ILAS G D + VW+L I
Sbjct: 316716 TFQGHRGGVRSVSFSPDGK-ILASGGHDTTVKVWNLEGI 316603
Score = 57.8 bits (138), Expect = 2e-06
Identities = 42/155 (27%), Positives = 79/155 (50%)
Frame = +2
Query: 251 KLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL 310
++ +W T N K HTA V +F+P S +LA+GSAD T+ LWD+ + L
Sbjct: 26222 EIRLWQTSDN---KQLRIYKGHTAWVWAFAFSPDSR-MLASGSADSTIKLWDVHTGEC-L 26386
Query: 311 HSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIH 370
+ + ++++ V +SP ILAS+ D+ + +WD++ +Q+ +D + F
Sbjct: 26387 KTLSKNTNKVYSVAFSPDGR-ILASASQDQTIKLWDIATGNCQQTLIGHDDWVWSVTF-- 26557
Query: 371 GGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
+ ++D + P ++ S S D +++W +A
Sbjct: 26558 ----SPVTD-----DRPLLLASSSADQHIKLWDVA 26635
Score = 57.0 bits (136), Expect = 4e-06
Identities = 51/212 (24%), Positives = 96/212 (45%)
Frame = -1
Query: 193 LLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
++S+S D TI LW I G +++ + H V +S+ + S +D +
Sbjct: 312665 IVSSSLDKTIKLWRID-----GSIINT---WNAHNGWVNSISFSP-DGKMIASGGEDNLV 312513
Query: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 312
+W + + K ++ H + + F+P + ILA+ S DKT+ W+ LK +
Sbjct: 312512 KLWQATNGHLIK---TLTGHKERITSVKFSPDGK-ILASASGDKTIKFWNTDGKFLK--T 312351
Query: 313 FESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGG 372
+H ++ + +S ++T L S+G D + VW + DG L+ G
Sbjct: 312350 IAAHNQQVNSINFSSDSKT-LVSAGADSTMKVWKI-------------DG--TLIKTISG 312219
Query: 373 HTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
+I D +++P+ VI S S D +++ Q+
Sbjct: 312218 RGEQIRDVTFSPDNK-VIASASSDKTVRIRQL 312126
Score = 55.8 bits (133), Expect = 8e-06
Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Frame = +1
Query: 268 SVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN---LKLKLHSFESHKDEIFQVQ 324
++ H+ +V + F+P + LA+GSADKTV +W+L N L LK H S + +
Sbjct: 264439 TLKGHSDKVMSVMFSPDGQR-LASGSADKTVRVWNLANEETLILKGHGKSSWSGGVNSIA 264615
Query: 325 WSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
+SP+ +T LAS+ D+ + +WD++ E + GH + S++P
Sbjct: 264616 FSPNGKT-LASASDDKTIKLWDVNTGAE--------------IIAFTGHEEAVYSVSFSP 264750
Query: 385 NEPWVICSVSEDNIMQVWQMA 405
+ ++ S S+D +++W +A
Sbjct: 264751 DGKTLV-SGSKDKSVKLWSLA 264810
Score = 53.1 bits (126), Expect = 5e-05
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = +2
Query: 164 SGECNPDLRLRGHQKEGYGLSWNPNLSGHL-LSASDDHTICLWDISAVPKKGKVVDAKTI 222
+GEC L+ GH+K+ Y ++++PN G + S S+D T+ LWDIS G VD T+
Sbjct: 27650 TGECVHTLK--GHEKQVYSVAFSPN--GQIAASGSEDTTVKLWDIST----GSCVD--TL 27799
Query: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRS 259
GHTA + V++ L S ++D+K+ +WD ++
Sbjct: 27800 KHGHTAAIRSVAFS-PDGRLLASGSEDEKIQLWDMQN 27907
Score = 52.0 bits (123), Expect = 1e-04
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Frame = +2
Query: 139 IIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNP--NLSGHLL-S 195
I+A+ + S++ ++D SG+C L + G+ W+ +L G LL S
Sbjct: 27473 ILASGSADSEIKIWDVA--------SGKCLQTLT------DPQGMIWSVAFSLDGTLLAS 27610
Query: 196 ASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW 255
AS+D T+ LW++ K G+ V GH V V++ + + S ++D + +W
Sbjct: 27611 ASEDQTVKLWNL----KTGECVHT---LKGHEKQVYSVAFS-PNGQIAASGSEDTTVKLW 27766
Query: 256 DTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 305
D + S HTA + ++F+P +LA+GS D+ + LWD++N
Sbjct: 27767 DISTG--SCVDTLKHGHTAAIRSVAFSPDGR-LLASGSEDEKIQLWDMQN 27907
Score = 51.6 bits (122), Expect = 2e-04
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Frame = -3
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFT--GHTAVV 230
L+GH + ++ +P+ L S S D TI LW+++ + I+T GH+ VV
Sbjct: 316962 LQGHSASVWSVNLSPD-GQTLASTSQDETIKLWNLNG----------ELIYTLRGHSDVV 316816
Query: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
++S+ +++ S +DD + +W+ + K + H V +SF+P + ILA
Sbjct: 316815 YNLSFSPDGKTI-ASASDDGTIKLWNVPNGTLLK---TFQGHRGGVRSVSFSPDGK-ILA 316651
Query: 291 TGSADKTVALWDLRNLKLK 309
+G D TV +W+L ++L+
Sbjct: 316650 SGGHDTTVKVWNLEGIELQ 316594
>dbj|AK004687.1|AK004687 Mus musculus adult male lung cDNA, RIKEN full-length enriched
library, clone:1200010C05:peroxisome biogenesis factor
7, full insert sequence
Length = 1441
Score = 82.8 bits (203), Expect = 6e-14
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Frame = +3
Query: 176 HQKEGYGLSWNPNLSGHLL-SASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVS 234
H +E Y + W+ L+ S S D T+ +WD + V ++ F GH +V+
Sbjct: 399 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPT-------VGNSLCTFRGHESVIYSTI 557
Query: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
W F S + DQ L IWD + T+ + AH E+ + Y+E ++ TG+
Sbjct: 558 WSPHIPGCFASASGDQTLRIWDVK---TTGVRIVIPAHQTEILSCDWCKYNENLVVTGAV 728
Query: 295 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
D ++ WDLRN++ + H I +V++SP + ++LAS D + W+ SK
Sbjct: 729 DCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 893
Score = 75.9 bits (185), Expect = 8e-12
Identities = 46/173 (26%), Positives = 76/173 (43%)
Frame = +3
Query: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDV 233
RGH+ Y W+P++ G SAS D T+ +WD+ K + + H +
Sbjct: 525 RGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV-------KTTGVRIVIPAHQTEILSC 683
Query: 234 SWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 293
W +E+L + A D L WD R N +P + HT + + F+P+ +LA+ S
Sbjct: 684 DWCKYNENLVVTGAVDCSLRGWDLR--NVRQPVFELLGHTYAIRRVKFSPFHASVLASCS 857
Query: 294 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
D TV W+ L + E H + + S + T +A D + ++D
Sbjct: 858 YDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCSWDETIKIYD 1016
Score = 75.1 bits (183), Expect = 1e-11
Identities = 54/227 (23%), Positives = 99/227 (42%), Gaps = 1/227 (0%)
Frame = +3
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLH- 239
+ ++W+ N L++ S D ++ LWD + K ++ HT V V W
Sbjct: 282 FDVTWSENNEHVLVTCSGDGSLQLWDTA------KATGPLQVYKEHTQEVYSVDWSQTRG 443
Query: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
E L S + DQ + +WD N+ + H + + ++P+ A+ S D+T+
Sbjct: 444 EQLVVSGSWDQTVKVWDPTVGNSLC---TFRGHESVIYSTIWSPHIPGCFASASGDQTLR 614
Query: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA 359
+WD++ +++ +H+ EI W +NE ++ + D L WDL + +
Sbjct: 615 IWDVKTTGVRI-VIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVF---- 779
Query: 360 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
ELL GHT I ++P V+ S S D ++ W ++
Sbjct: 780 -----ELL----GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 893
Score = 64.7 bits (156), Expect = 2e-08
Identities = 49/182 (26%), Positives = 84/182 (45%), Gaps = 3/182 (1%)
Frame = +3
Query: 173 LRGHQKEGYGLSWNPNLSGHLL-SASDDHTIC-LWDISAVPKKGKVVDAKTIFTGHTAVV 230
LR + GY ++P L G L +A+ D+ I + + + + F + +
Sbjct: 105 LRVPGRHGYAAEFSPYLPGRLACAAAHDYGIAGCGTLLVLDQNESGLQIFRSFDWNDGLF 284
Query: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY-SEFIL 289
DV+W +E + + + D L +WDT + P HT EV + ++ E ++
Sbjct: 285 -DVTWSENNEHVLVTCSGDGSLQLWDTAK--ATGPLQVYKEHTQEVYSVDWSQTRGEQLV 455
Query: 290 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
+GS D+TV +WD + L +F H+ I+ WSPH AS+ D+ L +WD+
Sbjct: 456 VSGSWDQTVKVWD-PTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKT 632
Query: 350 IG 351
G
Sbjct: 633 TG 638
>ref|NM_008822.1| Mus musculus peroxisome biogenesis factor 7 (Pex7), mRNA
Length = 1468
Score = 82.8 bits (203), Expect = 6e-14
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Frame = +3
Query: 176 HQKEGYGLSWNPNLSGHLL-SASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVS 234
H +E Y + W+ L+ S S D T+ +WD + V ++ F GH +V+
Sbjct: 405 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPT-------VGNSLCTFRGHESVIYSTI 563
Query: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
W F S + DQ L IWD + T+ + AH E+ + Y+E ++ TG+
Sbjct: 564 WSPHIPGCFASASGDQTLRIWDVK---TTGVRIVIPAHQTEILSCDWCKYNENLVVTGAV 734
Query: 295 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
D ++ WDLRN++ + H I +V++SP + ++LAS D + W+ SK
Sbjct: 735 DCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 899
Score = 75.9 bits (185), Expect = 8e-12
Identities = 46/173 (26%), Positives = 76/173 (43%)
Frame = +3
Query: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDV 233
RGH+ Y W+P++ G SAS D T+ +WD+ K + + H +
Sbjct: 531 RGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV-------KTTGVRIVIPAHQTEILSC 689
Query: 234 SWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 293
W +E+L + A D L WD R N +P + HT + + F+P+ +LA+ S
Sbjct: 690 DWCKYNENLVVTGAVDCSLRGWDLR--NVRQPVFELLGHTYAIRRVKFSPFHASVLASCS 863
Query: 294 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
D TV W+ L + E H + + S + T +A D + ++D
Sbjct: 864 YDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCSWDETIKIYD 1022
Score = 75.1 bits (183), Expect = 1e-11
Identities = 54/227 (23%), Positives = 99/227 (42%), Gaps = 1/227 (0%)
Frame = +3
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLH- 239
+ ++W+ N L++ S D ++ LWD + K ++ HT V V W
Sbjct: 288 FDVTWSENNEHVLVTCSGDGSLQLWDTA------KATGPLQVYKEHTQEVYSVDWSQTRG 449
Query: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
E L S + DQ + +WD N+ + H + + ++P+ A+ S D+T+
Sbjct: 450 EQLVVSGSWDQTVKVWDPTVGNSLC---TFRGHESVIYSTIWSPHIPGCFASASGDQTLR 620
Query: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA 359
+WD++ +++ +H+ EI W +NE ++ + D L WDL + +
Sbjct: 621 IWDVKTTGVRI-VIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVF---- 785
Query: 360 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
ELL GHT I ++P V+ S S D ++ W ++
Sbjct: 786 -----ELL----GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 899
Score = 42.7 bits (99), Expect = 0.071
Identities = 38/162 (23%), Positives = 61/162 (37%), Gaps = 38/162 (23%)
Frame = +3
Query: 281 FNPYSEFILATGSADK-------TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 333
F+PY LA +A T+ + D L++ D +F V WS +NE +L
Sbjct: 147 FSPYLPGRLACAAAQHYGIAGCGTLLVLDQNESGLQIFRSFDWNDGLFDVTWSENNEHVL 326
Query: 334 ASSGTDRRLNVWDLSK------IGEEQSPE----DAEDGPPELLFIHG------------ 371
+ D L +WD +K + +E + E D E L + G
Sbjct: 327 VTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPT 506
Query: 372 ---------GHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
GH + I W+P+ P S S D +++W +
Sbjct: 507 VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 632
>gb|U69171.1|MMU69171 Mus musculus peroxisomal PTS2 receptor mRNA, complete cds
Length = 1468
Score = 82.8 bits (203), Expect = 6e-14
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Frame = +3
Query: 176 HQKEGYGLSWNPNLSGHLL-SASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVS 234
H +E Y + W+ L+ S S D T+ +WD + V ++ F GH +V+
Sbjct: 405 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPT-------VGNSLCTFRGHESVIYSTI 563
Query: 235 WHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSA 294
W F S + DQ L IWD + T+ + AH E+ + Y+E ++ TG+
Sbjct: 564 WSPHIPGCFASASGDQTLRIWDVK---TTGVRIVIPAHQTEILSCDWCKYNENLVVTGAV 734
Query: 295 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
D ++ WDLRN++ + H I +V++SP + ++LAS D + W+ SK
Sbjct: 735 DCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 899
Score = 75.9 bits (185), Expect = 8e-12
Identities = 46/173 (26%), Positives = 76/173 (43%)
Frame = +3
Query: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDV 233
RGH+ Y W+P++ G SAS D T+ +WD+ K + + H +
Sbjct: 531 RGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV-------KTTGVRIVIPAHQTEILSC 689
Query: 234 SWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGS 293
W +E+L + A D L WD R N +P + HT + + F+P+ +LA+ S
Sbjct: 690 DWCKYNENLVVTGAVDCSLRGWDLR--NVRQPVFELLGHTYAIRRVKFSPFHASVLASCS 863
Query: 294 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
D TV W+ L + E H + + S + T +A D + ++D
Sbjct: 864 YDFTVRFWNFSKPDPLLETVEHHTEFTCGLDLSLQSPTQVADCSWDETIKIYD 1022
Score = 75.1 bits (183), Expect = 1e-11
Identities = 54/227 (23%), Positives = 99/227 (42%), Gaps = 1/227 (0%)
Frame = +3
Query: 181 YGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLH- 239
+ ++W+ N L++ S D ++ LWD + K ++ HT V V W
Sbjct: 288 FDVTWSENNEHVLVTCSGDGSLQLWDTA------KATGPLQVYKEHTQEVYSVDWSQTRG 449
Query: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
E L S + DQ + +WD N+ + H + + ++P+ A+ S D+T+
Sbjct: 450 EQLVVSGSWDQTVKVWDPTVGNSLC---TFRGHESVIYSTIWSPHIPGCFASASGDQTLR 620
Query: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA 359
+WD++ +++ +H+ EI W +NE ++ + D L WDL + +
Sbjct: 621 IWDVKTTGVRI-VIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVF---- 785
Query: 360 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
ELL GHT I ++P V+ S S D ++ W ++
Sbjct: 786 -----ELL----GHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 899
Score = 42.7 bits (99), Expect = 0.071
Identities = 38/162 (23%), Positives = 61/162 (37%), Gaps = 38/162 (23%)
Frame = +3
Query: 281 FNPYSEFILATGSADK-------TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 333
F+PY LA +A T+ + D L++ D +F V WS +NE +L
Sbjct: 147 FSPYLPGRLACAAAQHYGIAGCGTLLVLDQNESGLQIFRSFDWNDGLFDVTWSENNEHVL 326
Query: 334 ASSGTDRRLNVWDLSK------IGEEQSPE----DAEDGPPELLFIHG------------ 371
+ D L +WD +K + +E + E D E L + G
Sbjct: 327 VTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPT 506
Query: 372 ---------GHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
GH + I W+P+ P S S D +++W +
Sbjct: 507 VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 632
>ref|NM_128855.1| Arabidopsis thaliana chromosome 2 CHR2v12152001 genomic sequence
Length = 2323
Score = 82.4 bits (202), Expect = 8e-14
Identities = 71/264 (26%), Positives = 122/264 (45%)
Frame = +1
Query: 139 IIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASD 198
+ AT S + VFD++ ++P +C P + + K LSWN + H+ S+
Sbjct: 1195 LFATAGVSRCIKVFDFSSVVNEPADM-QC-PIVEMSTRSKLSC-LSWNKHEKNHIASSDY 1365
Query: 199 DHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR 258
+ + +WD++ + +++ + H V + S+ S +DD K+ +W TR
Sbjct: 1366 EGIVTVWDVTT---RQSLME----YEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTR 1524
Query: 259 SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD 318
+ ++D A + C+ +NP S +A GSAD + +DLRN+ LH F HK
Sbjct: 1525 QEASVI---NIDMK-ANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKK 1692
Query: 319 EIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKIS 378
+ V++ +NE LAS+ TD L +WD+ +D P F GHT + +
Sbjct: 1693 AVSYVKFLSNNE--LASASTDSTLRLWDV------------KDNLPVRTF--RGHTNEKN 1824
Query: 379 DFSWNPNEPWVICSVSEDNIMQVW 402
N ++ C SE N + V+
Sbjct: 1825 FVGLTVNSEYLACG-SETNEVYVY 1893
>gb|AF242546.1|AF242546 Homo sapiens YTM1 mRNA, complete cds
Length = 1663
Score = 82.4 bits (202), Expect = 8e-14
Identities = 53/174 (30%), Positives = 88/174 (50%)
Frame = +2
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTA 228
P + L GH + + W+ + + SAS DHTI +WD+ + K + K
Sbjct: 878 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVESGSLKSTLTGNK-------- 1027
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
V +S+ L + L S + D+ + +WD R+ + S S S+ +HT V + ++P E
Sbjct: 1028 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSMVSLSLTSHTGWVTSVKWSPTHEQQ 1204
Query: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1205 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1360
Score = 58.2 bits (139), Expect = 2e-06
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 9/170 (5%)
Frame = +2
Query: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
+GH V V W E S + D + +WD S + S NC+S++P
Sbjct: 893 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVESGSLK----STLTGNKVFNCISYSP 1054
Query: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRR 341
+ LA+GS D+ + LWD R + S SH + V+WSP +E L S D
Sbjct: 1055 LCKR-LASGSTDRHIRLWDPRTKDGSMVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1231
Query: 342 LNVWD-------LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1232 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1381
Score = 55.8 bits (133), Expect = 8e-06
Identities = 66/254 (25%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +2
Query: 175 GHQKEGYGLSW--NPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
GH ++W +LS LLSAS D TI LW+ + K K + GH V+
Sbjct: 545 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHC---CRGHAGSVDS 715
Query: 233 VSWHLLHESLFGSVADDQKLMIWDT----------RSNN-------------TSKPSHSV 269
++ + F S + D+ L IW T S N T P ++
Sbjct: 716 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 892
Query: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VQWSPH 328
H V+ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 893 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESGSLK-STLTGNK--VFNCISYSPL 1057
Query: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1058CKR-LASGSTDRHIRLWD----------PRTKDGSMVSLSLTS-HTGWVTSVKWSPTHEQ 1201
Query: 389 VICSVSEDNIMQVW 402
+ S S DNI+++W
Sbjct: 1202QLISGSLDNIVKLW 1243
Score = 44.3 bits (103), Expect = 0.025
Identities = 62/292 (21%), Positives = 102/292 (34%), Gaps = 20/292 (6%)
Frame = +2
Query: 133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGH 192
MP + + S +V+ +Y + + P P +C + W ++ G
Sbjct: 323 MPLDKHMEMENISSEEVVEIEYVEKYTAPQPE-QCM------------FHDDWISSIKGA 463
Query: 193 ---LLSASDDHTICLWDISAVPKKGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVA 247
+L+ S D T +W + + K+I T GHT VV+DV+W
Sbjct: 464 EEWILTGSYDKTSRIWSL----------EGKSIMTIVGHTDVVKDVAW------------ 577
Query: 248 DDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL---R 304
K S ++CL L + S D+T+ LW+ R
Sbjct: 578 --------------VKKDS---------LSCL---------LLSASMDQTILLWEWNVER 661
Query: 305 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPP 364
N LH H + + T S D+ L +W EE E++ + P
Sbjct: 662 NKVKALHCCRGHAGSVDSIAVDGSG-TKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPR 838
Query: 365 EL------------LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
+ + GH +S W+ E ICS S D+ ++VW +
Sbjct: 839 KKQKTEQLGLTRTPIVTLSGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDV 988
Score = 36.2 bits (82), Expect = 6.7
Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
Frame = +2
Query: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN--ETILASSGTDRRLN 343
E+IL TGS DKT +W L + + H D + V W + +L S+ D+ +
Sbjct: 467 EWIL-TGSYDKTSRIWSLEGKSIM--TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTIL 637
Query: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
+W+ + E + L GH + + + CS S D ++++W
Sbjct: 638 LWEW----------NVERNKVKALHCCRGHAGSVDSIAVD-GSGTKFCSGSWDKMLKIWS 784
Query: 404 MAENIYNDEDPEGSVDP 420
DE E + P
Sbjct: 785 TVPTDEEDEMEESTNRP 835
>dbj|AK001743.1|AK001743 Homo sapiens cDNA FLJ10881 fis, clone NT2RP4001927, weakly similar to
MICROTUBULE-ASSOCIATED PROTEIN YTM1
Length = 1707
Score = 82.0 bits (201), Expect = 1e-13
Identities = 53/174 (30%), Positives = 88/174 (50%)
Frame = +2
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTA 228
P + L GH + + W+ + + SAS DHTI +WD+ + K + K
Sbjct: 932 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVESGSLKSTLTGNK-------- 1081
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
V +S+ L + L S + D+ + +WD R+ + S S S+ +HT V + ++P E
Sbjct: 1082 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1258
Query: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1259 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1414
Score = 58.9 bits (141), Expect = 1e-06
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 9/170 (5%)
Frame = +2
Query: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
+GH V V W E S + D + +WD S + S NC+S++P
Sbjct: 947 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVESGSLK----STLTGNKVFNCISYSP 1108
Query: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRR 341
+ LA+GS D+ + LWD R L S SH + V+WSP +E L S D
Sbjct: 1109 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1285
Query: 342 LNVWD-------LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1286 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1435
Score = 55.5 bits (132), Expect = 1e-05
Identities = 66/254 (25%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +2
Query: 175 GHQKEGYGLSW--NPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
GH ++W +LS LLSAS D TI LW+ + K K + GH V+
Sbjct: 599 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHC---CRGHAGSVDS 769
Query: 233 VSWHLLHESLFGSVADDQKLMIWDT----------RSNN-------------TSKPSHSV 269
++ + F S + D+ L IW T S N T P ++
Sbjct: 770 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 946
Query: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VQWSPH 328
H V+ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 947 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESGSLK-STLTGNK--VFNCISYSPL 1111
Query: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1112CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1255
Query: 389 VICSVSEDNIMQVW 402
+ S S DNI+++W
Sbjct: 1256QLISGSLDNIVKLW 1297
Score = 44.7 bits (104), Expect = 0.019
Identities = 62/292 (21%), Positives = 102/292 (34%), Gaps = 20/292 (6%)
Frame = +2
Query: 133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGH 192
MP + + S +V+ +Y + + P P +C + W ++ G
Sbjct: 377 MPLDKHMEMENVSSEEVVEIEYVEKYTAPQPE-QCM------------FHDDWISSIKGA 517
Query: 193 ---LLSASDDHTICLWDISAVPKKGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVA 247
+L+ S D T +W + + K+I T GHT VV+DV+W
Sbjct: 518 EEWILTGSYDKTSRIWSL----------EGKSIMTIVGHTDVVKDVAW------------ 631
Query: 248 DDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL---R 304
K S ++CL L + S D+T+ LW+ R
Sbjct: 632 --------------VKKDS---------LSCL---------LLSASMDQTILLWEWNVER 715
Query: 305 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPP 364
N LH H + + T S D+ L +W EE E++ + P
Sbjct: 716 NKVKALHCCRGHAGSVDSIAVDGSG-TKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPR 892
Query: 365 EL------------LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
+ + GH +S W+ E ICS S D+ ++VW +
Sbjct: 893 KKQKTEQLGLTRTPIVTLSGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDV 1042
Score = 36.2 bits (82), Expect = 6.7
Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
Frame = +2
Query: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN--ETILASSGTDRRLN 343
E+IL TGS DKT +W L + + H D + V W + +L S+ D+ +
Sbjct: 521 EWIL-TGSYDKTSRIWSLEGKSIM--TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTIL 691
Query: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
+W+ + E + L GH + + + CS S D ++++W
Sbjct: 692 LWEW----------NVERNKVKALHCCRGHAGSVDSIAVD-GSGTKFCSGSWDKMLKIWS 838
Query: 404 MAENIYNDEDPEGSVDP 420
DE E + P
Sbjct: 839 TVPTDEEDEMEESTNRP 889
>ref|XM_087024.1| Homo sapiens WD repeat domain 12 (WDR12), mRNA
Length = 1720
Score = 82.0 bits (201), Expect = 1e-13
Identities = 53/174 (30%), Positives = 88/174 (50%)
Frame = +1
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTA 228
P + L GH + + W+ + + SAS DHTI +WD+ + K + K
Sbjct: 940 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVESGSLKSTLTGNK-------- 1089
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
V +S+ L + L S + D+ + +WD R+ + S S S+ +HT V + ++P E
Sbjct: 1090 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1266
Query: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1267 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1422
Score = 58.9 bits (141), Expect = 1e-06
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 9/170 (5%)
Frame = +1
Query: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
+GH V V W E S + D + +WD S + S NC+S++P
Sbjct: 955 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVESGSLK----STLTGNKVFNCISYSP 1116
Query: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRR 341
+ LA+GS D+ + LWD R L S SH + V+WSP +E L S D
Sbjct: 1117 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1293
Query: 342 LNVWD-------LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1294 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1443
Score = 55.5 bits (132), Expect = 1e-05
Identities = 66/254 (25%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +1
Query: 175 GHQKEGYGLSW--NPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
GH ++W +LS LLSAS D TI LW+ + K K + GH V+
Sbjct: 607 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHC---CRGHAGSVDS 777
Query: 233 VSWHLLHESLFGSVADDQKLMIWDT----------RSNN-------------TSKPSHSV 269
++ + F S + D+ L IW T S N T P ++
Sbjct: 778 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 954
Query: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VQWSPH 328
H V+ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 955 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESGSLK-STLTGNK--VFNCISYSPL 1119
Query: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1120CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1263
Query: 389 VICSVSEDNIMQVW 402
+ S S DNI+++W
Sbjct: 1264QLISGSLDNIVKLW 1305
Score = 44.3 bits (103), Expect = 0.025
Identities = 62/292 (21%), Positives = 102/292 (34%), Gaps = 20/292 (6%)
Frame = +1
Query: 133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGH 192
MP + + S +V+ +Y + + P P +C + W ++ G
Sbjct: 385 MPLDKHMEMENISSEEVVEIEYVEKYTAPQPE-QCM------------FHDDWISSIKGA 525
Query: 193 ---LLSASDDHTICLWDISAVPKKGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVA 247
+L+ S D T +W + + K+I T GHT VV+DV+W
Sbjct: 526 EEWILTGSYDKTSRIWSL----------EGKSIMTIVGHTDVVKDVAW------------ 639
Query: 248 DDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL---R 304
K S ++CL L + S D+T+ LW+ R
Sbjct: 640 --------------VKKDS---------LSCL---------LLSASMDQTILLWEWNVER 723
Query: 305 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPP 364
N LH H + + T S D+ L +W EE E++ + P
Sbjct: 724 NKVKALHCCRGHAGSVDSIAVDGSG-TKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPR 900
Query: 365 EL------------LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
+ + GH +S W+ E ICS S D+ ++VW +
Sbjct: 901 KKQKTEQLGLTRTPIVTLSGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDV 1050
Score = 36.2 bits (82), Expect = 6.7
Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
Frame = +1
Query: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN--ETILASSGTDRRLN 343
E+IL TGS DKT +W L + + H D + V W + +L S+ D+ +
Sbjct: 529 EWIL-TGSYDKTSRIWSLEGKSIM--TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTIL 699
Query: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
+W+ + E + L GH + + + CS S D ++++W
Sbjct: 700 LWEW----------NVERNKVKALHCCRGHAGSVDSIAVD-GSGTKFCSGSWDKMLKIWS 846
Query: 404 MAENIYNDEDPEGSVDP 420
DE E + P
Sbjct: 847 TVPTDEEDEMEESTNRP 897
>ref|NM_018256.2| Homo sapiens WD repeat domain 12 (WDR12), mRNA
Length = 1720
Score = 82.0 bits (201), Expect = 1e-13
Identities = 53/174 (30%), Positives = 88/174 (50%)
Frame = +1
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTA 228
P + L GH + + W+ + + SAS DHTI +WD+ + K + K
Sbjct: 940 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVGSGSLKSTLTGNK-------- 1089
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
V +S+ L + L S + D+ + +WD R+ + S S S+ +HT V + ++P E
Sbjct: 1090 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1266
Query: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1267 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1422
Score = 58.2 bits (139), Expect = 2e-06
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 9/170 (5%)
Frame = +1
Query: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
+GH V V W E S + D + +WD S + S NC+S++P
Sbjct: 955 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVGSGSLK----STLTGNKVFNCISYSP 1116
Query: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRR 341
+ LA+GS D+ + LWD R L S SH + V+WSP +E L S D
Sbjct: 1117 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1293
Query: 342 LNVWD-------LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1294 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1443
Score = 54.7 bits (130), Expect = 2e-05
Identities = 66/254 (25%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +1
Query: 175 GHQKEGYGLSW--NPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
GH ++W +LS LLSAS D TI LW+ + K K + GH V+
Sbjct: 607 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHC---CRGHAGSVDS 777
Query: 233 VSWHLLHESLFGSVADDQKLMIWDT----------RSNN-------------TSKPSHSV 269
++ + F S + D+ L IW T S N T P ++
Sbjct: 778 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 954
Query: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VQWSPH 328
H V+ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 955 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVGSGSLK-STLTGNK--VFNCISYSPL 1119
Query: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1120CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1263
Query: 389 VICSVSEDNIMQVW 402
+ S S DNI+++W
Sbjct: 1264QLISGSLDNIVKLW 1305
Score = 44.7 bits (104), Expect = 0.019
Identities = 62/292 (21%), Positives = 102/292 (34%), Gaps = 20/292 (6%)
Frame = +1
Query: 133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGH 192
MP + + S +V+ +Y + + P P +C + W ++ G
Sbjct: 385 MPLDKHMEVENISSEEVVEIEYVEKCTAPQPE-QCM------------FHDDWISSIKGA 525
Query: 193 ---LLSASDDHTICLWDISAVPKKGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVA 247
+L+ S D T +W + + K+I T GHT VV+DV+W
Sbjct: 526 EEWILTGSYDKTSRIWSL----------EGKSIMTIVGHTDVVKDVAW------------ 639
Query: 248 DDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL---R 304
K S ++CL L + S D+T+ LW+ R
Sbjct: 640 --------------VKKDS---------LSCL---------LLSASMDQTILLWEWNVER 723
Query: 305 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPP 364
N LH H + + T S D+ L +W EE E++ + P
Sbjct: 724 NKVKALHCCRGHAGSVDSIAVDGSG-TKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPR 900
Query: 365 EL------------LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
+ + GH +S W+ E ICS S D+ ++VW +
Sbjct: 901 KKQKTEQLGLTRTPIVTLSGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDV 1050
Score = 36.2 bits (82), Expect = 6.7
Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
Frame = +1
Query: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN--ETILASSGTDRRLN 343
E+IL TGS DKT +W L + + H D + V W + +L S+ D+ +
Sbjct: 529 EWIL-TGSYDKTSRIWSLEGKSIM--TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTIL 699
Query: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
+W+ + E + L GH + + + CS S D ++++W
Sbjct: 700 LWEW----------NVERNKVKALHCCRGHAGSVDSIAVD-GSGTKFCSGSWDKMLKIWS 846
Query: 404 MAENIYNDEDPEGSVDP 420
DE E + P
Sbjct: 847 TVPTDEEDEMEESTNRP 897
>dbj|AK022782.1|AK022782 Homo sapiens cDNA FLJ12720 fis, clone NT2RP1001302, weakly similar to
MICROTUBULE-ASSOCIATED PROTEIN YTM1
Length = 1720
Score = 82.0 bits (201), Expect = 1e-13
Identities = 53/174 (30%), Positives = 88/174 (50%)
Frame = +1
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTA 228
P + L GH + + W+ + + SAS DHTI +WD+ + K + K
Sbjct: 940 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVGSGSLKSTLTGNK-------- 1089
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
V +S+ L + L S + D+ + +WD R+ + S S S+ +HT V + ++P E
Sbjct: 1090 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1266
Query: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1267 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1422
Score = 58.2 bits (139), Expect = 2e-06
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 9/170 (5%)
Frame = +1
Query: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
+GH V V W E S + D + +WD S + S NC+S++P
Sbjct: 955 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVGSGSLK----STLTGNKVFNCISYSP 1116
Query: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRR 341
+ LA+GS D+ + LWD R L S SH + V+WSP +E L S D
Sbjct: 1117 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1293
Query: 342 LNVWD-------LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1294 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1443
Score = 54.7 bits (130), Expect = 2e-05
Identities = 66/254 (25%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +1
Query: 175 GHQKEGYGLSW--NPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
GH ++W +LS LLSAS D TI LW+ + K K + GH V+
Sbjct: 607 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHC---CRGHAGSVDS 777
Query: 233 VSWHLLHESLFGSVADDQKLMIWDT----------RSNN-------------TSKPSHSV 269
++ + F S + D+ L IW T S N T P ++
Sbjct: 778 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 954
Query: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VQWSPH 328
H V+ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 955 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVGSGSLK-STLTGNK--VFNCISYSPL 1119
Query: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1120CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1263
Query: 389 VICSVSEDNIMQVW 402
+ S S DNI+++W
Sbjct: 1264QLISGSLDNIVKLW 1305
Score = 44.7 bits (104), Expect = 0.019
Identities = 62/292 (21%), Positives = 102/292 (34%), Gaps = 20/292 (6%)
Frame = +1
Query: 133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGH 192
MP + + S +V+ +Y + + P P +C + W ++ G
Sbjct: 385 MPLDKHMEVENISSEEVVEIEYVEKCTAPQPE-QCM------------FHDDWISSIKGA 525
Query: 193 ---LLSASDDHTICLWDISAVPKKGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVA 247
+L+ S D T +W + + K+I T GHT VV+DV+W
Sbjct: 526 EEWILTGSYDKTSRIWSL----------EGKSIMTIVGHTDVVKDVAW------------ 639
Query: 248 DDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL---R 304
K S ++CL L + S D+T+ LW+ R
Sbjct: 640 --------------VKKDS---------LSCL---------LLSASMDQTILLWEWNVER 723
Query: 305 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPP 364
N LH H + + T S D+ L +W EE E++ + P
Sbjct: 724 NKVKALHCCRGHAGSVDSIAVDGSG-TKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPR 900
Query: 365 EL------------LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
+ + GH +S W+ E ICS S D+ ++VW +
Sbjct: 901 KKQKTEQLGLTRTPIVTLSGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDV 1050
Score = 36.2 bits (82), Expect = 6.7
Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
Frame = +1
Query: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN--ETILASSGTDRRLN 343
E+IL TGS DKT +W L + + H D + V W + +L S+ D+ +
Sbjct: 529 EWIL-TGSYDKTSRIWSLEGKSIM--TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTIL 699
Query: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
+W+ + E + L GH + + + CS S D ++++W
Sbjct: 700 LWEW----------NVERNKVKALHCCRGHAGSVDSIAVD-GSGTKFCSGSWDKMLKIWS 846
Query: 404 MAENIYNDEDPEGSVDP 420
DE E + P
Sbjct: 847 TVPTDEEDEMEESTNRP 897
>dbj|AK022781.1|AK022781 Homo sapiens cDNA FLJ12719 fis, clone NT2RP1001294, weakly similar to
MICROTUBULE-ASSOCIATED PROTEIN YTM1
Length = 1720
Score = 82.0 bits (201), Expect = 1e-13
Identities = 53/174 (30%), Positives = 88/174 (50%)
Frame = +1
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTA 228
P + L GH + + W+ + + SAS DHTI +WD+ + K + K
Sbjct: 940 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVGSGSLKSTLTGNK-------- 1089
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
V +S+ L + L S + D+ + +WD R+ + S S S+ +HT V + ++P E
Sbjct: 1090 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1266
Query: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1267 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1422
Score = 58.2 bits (139), Expect = 2e-06
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 9/170 (5%)
Frame = +1
Query: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
+GH V V W E S + D + +WD S + S NC+S++P
Sbjct: 955 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVGSGSLK----STLTGNKVFNCISYSP 1116
Query: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRR 341
+ LA+GS D+ + LWD R L S SH + V+WSP +E L S D
Sbjct: 1117 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1293
Query: 342 LNVWD-------LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1294 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1443
Score = 54.7 bits (130), Expect = 2e-05
Identities = 66/254 (25%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +1
Query: 175 GHQKEGYGLSW--NPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
GH ++W +LS LLSAS D TI LW+ + K K + GH V+
Sbjct: 607 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHC---CRGHAGSVDS 777
Query: 233 VSWHLLHESLFGSVADDQKLMIWDT----------RSNN-------------TSKPSHSV 269
++ + F S + D+ L IW T S N T P ++
Sbjct: 778 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 954
Query: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VQWSPH 328
H V+ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 955 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVGSGSLK-STLTGNK--VFNCISYSPL 1119
Query: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1120CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1263
Query: 389 VICSVSEDNIMQVW 402
+ S S DNI+++W
Sbjct: 1264QLISGSLDNIVKLW 1305
Score = 44.7 bits (104), Expect = 0.019
Identities = 62/292 (21%), Positives = 102/292 (34%), Gaps = 20/292 (6%)
Frame = +1
Query: 133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGH 192
MP + + S +V+ +Y + + P P +C + W ++ G
Sbjct: 385 MPLDKHMEVENISSEEVVEIEYVEKCTAPQPE-QCM------------FHDDWISSIKGA 525
Query: 193 ---LLSASDDHTICLWDISAVPKKGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVA 247
+L+ S D T +W + + K+I T GHT VV+DV+W
Sbjct: 526 EEWILTGSYDKTSRIWSL----------EGKSIMTIVGHTDVVKDVAW------------ 639
Query: 248 DDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL---R 304
K S ++CL L + S D+T+ LW+ R
Sbjct: 640 --------------VKKDS---------LSCL---------LLSASMDQTILLWEWNVER 723
Query: 305 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPP 364
N LH H + + T S D+ L +W EE E++ + P
Sbjct: 724 NKVKALHCCRGHAGSVDSIAVDGSG-TKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPR 900
Query: 365 EL------------LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
+ + GH +S W+ E ICS S D+ ++VW +
Sbjct: 901 KKQKTEQLGLTRTPIVTLSGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDV 1050
Score = 36.2 bits (82), Expect = 6.7
Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
Frame = +1
Query: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN--ETILASSGTDRRLN 343
E+IL TGS DKT +W L + + H D + V W + +L S+ D+ +
Sbjct: 529 EWIL-TGSYDKTSRIWSLEGKSIM--TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTIL 699
Query: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
+W+ + E + L GH + + + CS S D ++++W
Sbjct: 700 LWEW----------NVERNKVKALHCCRGHAGSVDSIAVD-GSGTKFCSGSWDKMLKIWS 846
Query: 404 MAENIYNDEDPEGSVDP 420
DE E + P
Sbjct: 847 TVPTDEEDEMEESTNRP 897
>dbj|AK056092.1|AK056092 Homo sapiens cDNA FLJ31530 fis, clone NT2RI2000578, highly similar to
Homo sapiens YTM1 mRNA
Length = 2275
Score = 82.0 bits (201), Expect = 1e-13
Identities = 53/174 (30%), Positives = 88/174 (50%)
Frame = +1
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTA 228
P + L GH + + W+ + + SAS DHTI +WD+ + K + K
Sbjct: 1495 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVESGSLKSTLTGNK-------- 1644
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
V +S+ L + L S + D+ + +WD R+ + S S S+ +HT V + ++P E
Sbjct: 1645 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1821
Query: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1822 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1977
Score = 58.9 bits (141), Expect = 1e-06
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 9/170 (5%)
Frame = +1
Query: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
+GH V V W E S + D + +WD S + S NC+S++P
Sbjct: 1510 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVESGSLK----STLTGNKVFNCISYSP 1671
Query: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRR 341
+ LA+GS D+ + LWD R L S SH + V+WSP +E L S D
Sbjct: 1672 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1848
Query: 342 LNVWD-------LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1849 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1998
Score = 55.5 bits (132), Expect = 1e-05
Identities = 66/254 (25%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +1
Query: 175 GHQKEGYGLSW--NPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
GH ++W +LS LLSAS D TI LW+ + K K + GH V+
Sbjct: 1162 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHC---CRGHAGSVDS 1332
Query: 233 VSWHLLHESLFGSVADDQKLMIWDT----------RSNN-------------TSKPSHSV 269
++ + F S + D+ L IW T S N T P ++
Sbjct: 1333 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 1509
Query: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VQWSPH 328
H V+ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 1510 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESGSLK-STLTGNK--VFNCISYSPL 1674
Query: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1675 CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1818
Query: 389 VICSVSEDNIMQVW 402
+ S S DNI+++W
Sbjct: 1819 QLISGSLDNIVKLW 1860
Score = 44.7 bits (104), Expect = 0.019
Identities = 62/292 (21%), Positives = 102/292 (34%), Gaps = 20/292 (6%)
Frame = +1
Query: 133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGH 192
MP + + S +V+ +Y + + P P +C + W ++ G
Sbjct: 940 MPLDKHMEMENVSSEEVVEIEYVEKYTAPQPE-QCM------------FHDDWISSIKGA 1080
Query: 193 ---LLSASDDHTICLWDISAVPKKGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVA 247
+L+ S D T +W + + K+I T GHT VV+DV+W
Sbjct: 1081 EEWILTGSYDKTSRIWSL----------EGKSIMTIVGHTDVVKDVAW------------ 1194
Query: 248 DDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL---R 304
K S ++CL L + S D+T+ LW+ R
Sbjct: 1195 --------------VKKDS---------LSCL---------LLSASMDQTILLWEWNVER 1278
Query: 305 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPP 364
N LH H + + T S D+ L +W EE E++ + P
Sbjct: 1279 NKVKALHCCRGHAGSVDSIAVDGSG-TKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPR 1455
Query: 365 EL------------LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
+ + GH +S W+ E ICS S D+ ++VW +
Sbjct: 1456 KKQKTEQLGLTRTPIVTLSGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDV 1605
Score = 36.2 bits (82), Expect = 6.7
Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
Frame = +1
Query: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN--ETILASSGTDRRLN 343
E+IL TGS DKT +W L + + H D + V W + +L S+ D+ +
Sbjct: 1084 EWIL-TGSYDKTSRIWSLEGKSIM--TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTIL 1254
Query: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
+W+ + E + L GH + + + CS S D ++++W
Sbjct: 1255 LWEW----------NVERNKVKALHCCRGHAGSVDSIAVD-GSGTKFCSGSWDKMLKIWS 1401
Query: 404 MAENIYNDEDPEGSVDP 420
DE E + P
Sbjct: 1402 TVPTDEEDEMEESTNRP 1452
>gb|BC008082.1|BC008082 Homo sapiens, clone MGC:835 IMAGE:3050219, mRNA, complete cds
Length = 1681
Score = 82.0 bits (201), Expect = 1e-13
Identities = 53/174 (30%), Positives = 88/174 (50%)
Frame = +2
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTA 228
P + L GH + + W+ + + SAS DHTI +WD+ + K + K
Sbjct: 884 PIVTLSGHMEAVSSVLWSD--AEEICSASWDHTIRVWDVESGSLKSTLTGNK-------- 1033
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
V +S+ L + L S + D+ + +WD R+ + S S S+ +HT V + ++P E
Sbjct: 1034 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1210
Query: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L
Sbjct: 1211 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKL 1366
Score = 58.9 bits (141), Expect = 1e-06
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 9/170 (5%)
Frame = +2
Query: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
+GH V V W E S + D + +WD S + S NC+S++P
Sbjct: 899 SGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVESGSLK----STLTGNKVFNCISYSP 1060
Query: 284 YSEFILATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRR 341
+ LA+GS D+ + LWD R L S SH + V+WSP +E L S D
Sbjct: 1061 LCKR-LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNI 1237
Query: 342 LNVWD-------LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP 384
+ +WD L + + + D L + GG K+ + ++P
Sbjct: 1238 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSP 1387
Score = 55.5 bits (132), Expect = 1e-05
Identities = 66/254 (25%), Positives = 107/254 (41%), Gaps = 26/254 (10%)
Frame = +2
Query: 175 GHQKEGYGLSW--NPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
GH ++W +LS LLSAS D TI LW+ + K K + GH V+
Sbjct: 551 GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHC---CRGHAGSVDS 721
Query: 233 VSWHLLHESLFGSVADDQKLMIWDT----------RSNN-------------TSKPSHSV 269
++ + F S + D+ L IW T S N T P ++
Sbjct: 722 IAVDG-SGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL 898
Query: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VQWSPH 328
H V+ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 899 SGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESGSLK-STLTGNK--VFNCISYSPL 1063
Query: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1064CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1207
Query: 389 VICSVSEDNIMQVW 402
+ S S DNI+++W
Sbjct: 1208QLISGSLDNIVKLW 1249
Score = 44.3 bits (103), Expect = 0.025
Identities = 62/292 (21%), Positives = 102/292 (34%), Gaps = 20/292 (6%)
Frame = +2
Query: 133 MPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGH 192
MP + + S +V+ +Y + + P P +C + W ++ G
Sbjct: 329 MPLDKHMEMENISSEEVVEIEYVEKYTAPQPE-QCM------------FHDDWISSIKGA 469
Query: 193 ---LLSASDDHTICLWDISAVPKKGKVVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVA 247
+L+ S D T +W + + K+I T GHT VV+DV+W
Sbjct: 470 EEWILTGSYDKTSRIWSL----------EGKSIMTIVGHTDVVKDVAW------------ 583
Query: 248 DDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL---R 304
K S ++CL L + S D+T+ LW+ R
Sbjct: 584 --------------VKKDS---------LSCL---------LLSASMDQTILLWEWNVER 667
Query: 305 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPP 364
N LH H + + T S D+ L +W EE E++ + P
Sbjct: 668 NKVKALHCCRGHAGSVDSIAVDGSG-TKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPR 844
Query: 365 EL------------LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
+ + GH +S W+ E ICS S D+ ++VW +
Sbjct: 845 KKQKTEQLGLTRTPIVTLSGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDV 994
Score = 36.2 bits (82), Expect = 6.7
Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
Frame = +2
Query: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN--ETILASSGTDRRLN 343
E+IL TGS DKT +W L + + H D + V W + +L S+ D+ +
Sbjct: 473 EWIL-TGSYDKTSRIWSLEGKSIM--TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTIL 643
Query: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
+W+ + E + L GH + + + CS S D ++++W
Sbjct: 644 LWEW----------NVERNKVKALHCCRGHAGSVDSIAVD-GSGTKFCSGSWDKMLKIWS 790
Query: 404 MAENIYNDEDPEGSVDP 420
DE E + P
Sbjct: 791 TVPTDEEDEMEESTNRP 841
>gb|AF443204.1|AF443204 Chlamydomonas reinhardtii WD40-repeat-containing protein (Mut11)
mRNA, complete cds
Length = 1113
Score = 82.0 bits (201), Expect = 1e-13
Identities = 66/247 (26%), Positives = 115/247 (45%)
Frame = +1
Query: 159 SKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVD 218
S P+P+ L GH K + ++P+ S L S S D T+ LWD + + +
Sbjct: 64 STPNPTVAFRCTHALSGHTKAVAAVKFSPDGS-LLASGSADRTVALWDAATGARVNTLA- 237
Query: 219 AKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNC 278
GH+ V DV+W+ L + ADD L +WD T ++ HT V C
Sbjct: 238 ------GHSCGVSDVAWNPNGRYL-ATAADDHSLKLWDAE---TGACLRTLTGHTNYVFC 387
Query: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 338
+F+ + +LA+GS D+T+ LWD+R+ + L +H D + +S ++ +++ +S
Sbjct: 388 CNFDGAAGHLLASGSFDETLRLWDVRSGRC-LREVPAHSDPVTSAAFS-YDGSMVVTSSL 561
Query: 339 DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
D + +WD ++ G D PP +S ++ PN +V+C+ + D
Sbjct: 562 DGLIRLWD-TQTGHCLKTLFDRDSPP------------VSFAAFTPNAKYVLCN-TLDGR 699
Query: 399 MQVWQMA 405
++W A
Sbjct: 700 AKLWDYA 720
>ref|NM_106276.1| Arabidopsis thaliana chromosome 1 CHR1v12152001 genomic sequence
Length = 1159
Score = 82.0 bits (201), Expect = 1e-13
Identities = 56/245 (22%), Positives = 107/245 (42%), Gaps = 9/245 (3%)
Frame = +1
Query: 161 PDPSGECNPDL-----RLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGK 215
P+P G+ N L H + + W P+ + L + D+ + W + + K +
Sbjct: 295 PEPYGQSNSSTLECVASLDAHVGKINCVLWCPSGNSDKLISMDEQNLVFWSLDSSKKSAE 474
Query: 216 VVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 275
V+ ++ H+ + +W+ H+ + + + WD R T K ++S++ A
Sbjct: 475 VLSKESAGMRHS--LSGGAWNP-HDVNSVAATSESSIQFWDLR---TMKKNNSIER--AH 630
Query: 276 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS 335
V + +N E IL + + + LWDLR K + H + V+ +P E ++ S
Sbjct: 631 VRNVDYNLKREHILVSADDESGIHLWDLRKTKFPVQELPGHTHWTWAVRCNPEYEELILS 810
Query: 336 SGTDRRLNVWDLSKIGEEQSPEDAEDGPPE----LLFIHGGHTAKISDFSWNPNEPWVIC 391
GTD +N+W S E ++ E + + LL + + + +W+ EPW+
Sbjct: 811 VGTDSAVNLWFASASSEHKTSESPVEASRQRVNPLLNSYTDYEDSVYGLAWSSREPWIFA 990
Query: 392 SVSED 396
S+S D
Sbjct: 991 SLSYD 1005
>dbj|AK003477.1|AK003477 Mus musculus 18 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:1110005N04:homolog to PCAF
ASSOCIATED FACTOR 65 BETA (PUTATIVE TRANSCRIPTION
FACTOR), full insert sequence
Length = 2010
Score = 73.9 bits (180), Expect(2) = 2e-13
Identities = 52/166 (31%), Positives = 81/166 (48%)
Frame = +3
Query: 245 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 304
S + D+ +W S + + P H A+V+C+ F+P S + LATGS DKTV LW +
Sbjct: 450 SGSHDRTARLW---SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQ 617
Query: 305 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPP 364
+ F H+ + + +SP N LAS+G D+RL +WDL+
Sbjct: 618 QGN-SVRLFTGHRGPVLSLSFSP-NGKYLASAGEDQRLKLWDLAS--------------G 749
Query: 365 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYN 410
L GHT I+ +++P + +I S S DN ++VW + N
Sbjct: 750 TLFKELRGHTDSITSLAFSP-DSGLIASASMDNSVRVWDIRSTCCN 884
Score = 45.4 bits (106), Expect = 0.011
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Frame = +3
Query: 288 ILATGSADKTVALWDL-RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWD 346
+L +GS D+T LW R L++++ H ++ V++ P N LA+ TD+ + +W
Sbjct: 441 VLCSGSHDRTARLWSFDRTYPLRIYA--GHLADVDCVKFHP-NSNYLATGSTDKTVRLW- 608
Query: 347 LSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
A+ G LF GH + S++PN + + S ED +++W +A
Sbjct: 609 -----------SAQQGNSVRLFT--GHRGPVLSLSFSPNGKY-LASAGEDQRLKLWDLA 743
Score = 27.7 bits (60), Expect(2) = 2e-13
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +1
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
LRGH Y + + SG LLS S+D +I WD+ + ++ GH V D
Sbjct: 262 LRGHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTN-------TVLYQGHAYPVWD 417
Query: 233 V 233
V
Sbjct: 418 V 420
>dbj|AK016611.1|AK016611 Mus musculus adult male testis cDNA, RIKEN full-length enriched
library, clone:4933402C23:WD repeat domain 12, full
insert sequence
Length = 2781
Score = 80.9 bits (198), Expect = 2e-13
Identities = 54/180 (30%), Positives = 90/180 (50%)
Frame = +2
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTA 228
P + L GH + + W+ + + SAS DHTI +WD+ + K + K
Sbjct: 959 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESGGLKSTLTGNK-------- 1108
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
V +S+ L + L S + D+ + +WD R+ + S S S+ +HT V + ++P E
Sbjct: 1109 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1285
Query: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1286 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1459
Score = 55.1 bits (131), Expect = 1e-05
Identities = 72/300 (24%), Positives = 121/300 (40%), Gaps = 32/300 (10%)
Frame = +2
Query: 175 GHQKEGYGLSW--NPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
GH ++W +LS LL+AS D T+ LW+ + K K + GH V+
Sbjct: 626 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNVEKNKVKALHC---CRGHAGSVDA 796
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNN-----------------------TSKPSHSV 269
++ + F S + D+ L IW T + T P ++
Sbjct: 797 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 973
Query: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VQWSPH 328
HT ++ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 974 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 1138
Query: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1139CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1282
Query: 389 VICSVSEDNIMQVWQMAE------NIYNDEDPEGSVDPEGQGSRRVCTCDPRLSLFSSEP 442
+ S S DNI+++W ++ ED SVD G D +L +S P
Sbjct: 1283QLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYSYSP 1462
>dbj|AK007500.1|AK007500 Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
enriched library, clone:1810014N03:WD repeat domain 12,
full insert sequence
Length = 1427
Score = 80.9 bits (198), Expect = 2e-13
Identities = 54/180 (30%), Positives = 90/180 (50%)
Frame = +3
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTA 228
P + L GH + + W+ + + SAS DHTI +WD+ + K + K
Sbjct: 882 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESGGLKSTLTGNK-------- 1031
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
V +S+ L + L S + D+ + +WD R+ + S S S+ +HT V + ++P E
Sbjct: 1032 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1208
Query: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1209 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1382
Score = 55.1 bits (131), Expect = 1e-05
Identities = 72/300 (24%), Positives = 121/300 (40%), Gaps = 32/300 (10%)
Frame = +3
Query: 175 GHQKEGYGLSW--NPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
GH ++W +LS LL+AS D T+ LW+ + K K + GH V+
Sbjct: 549 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNVEKNKVKALHC---CRGHAGSVDA 719
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNN-----------------------TSKPSHSV 269
++ + F S + D+ L IW T + T P ++
Sbjct: 720 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 896
Query: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VQWSPH 328
HT ++ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 897 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 1061
Query: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1062CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1205
Query: 389 VICSVSEDNIMQVWQMAE------NIYNDEDPEGSVDPEGQGSRRVCTCDPRLSLFSSEP 442
+ S S DNI+++W ++ ED SVD G D +L +S P
Sbjct: 1206QLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYSYSP 1385
>gb|AY059432.1| Mus musculus MTA.A10.069 WD repeat domain 12 (Wdr12) mRNA, partial
cds
Length = 650
Score = 80.9 bits (198), Expect = 2e-13
Identities = 54/180 (30%), Positives = 90/180 (50%)
Frame = +2
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTA 228
P + L GH + + W+ + + SAS DHTI +WD+ + K + K
Sbjct: 101 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESGGLKSTLTGNK-------- 250
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
V +S+ L + L S + D+ + +WD R+ + S S S+ +HT V + ++P E
Sbjct: 251 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 427
Query: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 428 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 601
Score = 45.1 bits (105), Expect = 0.014
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 7/188 (3%)
Frame = +2
Query: 262 TSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIF 321
T P ++ HT ++ + ++ E + + S D T+ +WD+ + LK + +K +F
Sbjct: 92 TRTPLVTLSGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VF 256
Query: 322 Q-VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDF 380
+ +SP + LAS TDR + +WD +DG L + HT ++
Sbjct: 257 NCISYSPLCKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSV 400
Query: 381 SWNPNEPWVICSVSEDNIMQVWQMAE------NIYNDEDPEGSVDPEGQGSRRVCTCDPR 434
W+P + S S DNI+++W ++ ED SVD G D +
Sbjct: 401 KWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNK 580
Query: 435 LSLFSSEP 442
L +S P
Sbjct: 581 LYSYSYSP 604
>gb|BC004748.1|BC004748 Mus musculus, WD repeat domain 12, clone MGC:7936 IMAGE:3583955,
mRNA, complete cds
Length = 1512
Score = 80.9 bits (198), Expect = 2e-13
Identities = 54/180 (30%), Positives = 90/180 (50%)
Frame = +3
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTA 228
P + L GH + + W+ + + SAS DHTI +WD+ + K + K
Sbjct: 939 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESGGLKSTLTGNK-------- 1088
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
V +S+ L + L S + D+ + +WD R+ + S S S+ +HT V + ++P E
Sbjct: 1089 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1265
Query: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1266 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1439
Score = 55.1 bits (131), Expect = 1e-05
Identities = 72/300 (24%), Positives = 121/300 (40%), Gaps = 32/300 (10%)
Frame = +3
Query: 175 GHQKEGYGLSW--NPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
GH ++W +LS LL+AS D T+ LW+ + K K + GH V+
Sbjct: 606 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNVEKNKVKALHC---CRGHAGSVDA 776
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNN-----------------------TSKPSHSV 269
++ + F S + D+ L IW T + T P ++
Sbjct: 777 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 953
Query: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VQWSPH 328
HT ++ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 954 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 1118
Query: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1119CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1262
Query: 389 VICSVSEDNIMQVWQMAE------NIYNDEDPEGSVDPEGQGSRRVCTCDPRLSLFSSEP 442
+ S S DNI+++W ++ ED SVD G D +L +S P
Sbjct: 1263QLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYSYSP 1442
>gb|AY059431.1| Mus musculus WD repeat domain 12 (Wdr12) mRNA, complete cds
Length = 1346
Score = 80.9 bits (198), Expect = 2e-13
Identities = 54/180 (30%), Positives = 90/180 (50%)
Frame = +1
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTA 228
P + L GH + + W+ + + SAS DHTI +WD+ + K + K
Sbjct: 796 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESGGLKSTLTGNK-------- 945
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
V +S+ L + L S + D+ + +WD R+ + S S S+ +HT V + ++P E
Sbjct: 946 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1122
Query: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1123LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1296
Score = 55.1 bits (131), Expect = 1e-05
Identities = 72/300 (24%), Positives = 121/300 (40%), Gaps = 32/300 (10%)
Frame = +1
Query: 175 GHQKEGYGLSW--NPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
GH ++W +LS LL+AS D T+ LW+ + K K + GH V+
Sbjct: 463 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNVEKNKVKALHC---CRGHAGSVDA 633
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNN-----------------------TSKPSHSV 269
++ + F S + D+ L IW T + T P ++
Sbjct: 634 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 810
Query: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VQWSPH 328
HT ++ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 811 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 975
Query: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 976 CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1119
Query: 389 VICSVSEDNIMQVWQMAE------NIYNDEDPEGSVDPEGQGSRRVCTCDPRLSLFSSEP 442
+ S S DNI+++W ++ ED SVD G D +L +S P
Sbjct: 1120QLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYSYSP 1299
>ref|NM_021312.1| Mus musculus WD repeat domain 12 (Wdr12), mRNA
Length = 1859
Score = 80.9 bits (198), Expect = 2e-13
Identities = 54/180 (30%), Positives = 90/180 (50%)
Frame = +3
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTA 228
P + L GH + + W+ + + SAS DHTI +WD+ + K + K
Sbjct: 1284 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESGGLKSTLTGNK-------- 1433
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
V +S+ L + L S + D+ + +WD R+ + S S S+ +HT V + ++P E
Sbjct: 1434 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1610
Query: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1611 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1784
Score = 55.1 bits (131), Expect = 1e-05
Identities = 72/300 (24%), Positives = 121/300 (40%), Gaps = 32/300 (10%)
Frame = +3
Query: 175 GHQKEGYGLSW--NPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
GH ++W +LS LL+AS D T+ LW+ + K K + GH V+
Sbjct: 951 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNVEKNKVKALHC---CRGHAGSVDA 1121
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNN-----------------------TSKPSHSV 269
++ + F S + D+ L IW T + T P ++
Sbjct: 1122 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 1298
Query: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VQWSPH 328
HT ++ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 1299 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 1463
Query: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1464 CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1607
Query: 389 VICSVSEDNIMQVWQMAE------NIYNDEDPEGSVDPEGQGSRRVCTCDPRLSLFSSEP 442
+ S S DNI+++W ++ ED SVD G D +L +S P
Sbjct: 1608 QLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYSYSP 1787
>dbj|AB041608.1|AB041608 Mus musculus brain cDNA, clone MNCb-5414, similar to Mus musculus
nuclear protein Ytm1p mRNA
Length = 1859
Score = 80.9 bits (198), Expect = 2e-13
Identities = 54/180 (30%), Positives = 90/180 (50%)
Frame = +3
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTA 228
P + L GH + + W+ + + SAS DHTI +WD+ + K + K
Sbjct: 1284 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESGGLKSTLTGNK-------- 1433
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
V +S+ L + L S + D+ + +WD R+ + S S S+ +HT V + ++P E
Sbjct: 1434 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1610
Query: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1611 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1784
Score = 55.1 bits (131), Expect = 1e-05
Identities = 72/300 (24%), Positives = 121/300 (40%), Gaps = 32/300 (10%)
Frame = +3
Query: 175 GHQKEGYGLSW--NPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
GH ++W +LS LL+AS D T+ LW+ + K K + GH V+
Sbjct: 951 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNVEKNKVKALHC---CRGHAGSVDA 1121
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNN-----------------------TSKPSHSV 269
++ + F S + D+ L IW T + T P ++
Sbjct: 1122 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 1298
Query: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VQWSPH 328
HT ++ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 1299 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 1463
Query: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 1464 CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1607
Query: 389 VICSVSEDNIMQVWQMAE------NIYNDEDPEGSVDPEGQGSRRVCTCDPRLSLFSSEP 442
+ S S DNI+++W ++ ED SVD G D +L +S P
Sbjct: 1608 QLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYSYSP 1787
>gb|AF239765.1|AF239765 Mus musculus nuclear protein Ytm1p mRNA, complete cds
Length = 1304
Score = 80.9 bits (198), Expect = 2e-13
Identities = 54/180 (30%), Positives = 90/180 (50%)
Frame = +2
Query: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTA 228
P + L GH + + W+ + + SAS DHTI +WD+ + K + K
Sbjct: 761 PLVTLSGHTEAISSVLWSD--AEEICSASWDHTIRVWDVESGGLKSTLTGNK-------- 910
Query: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFI 288
V +S+ L + L S + D+ + +WD R+ + S S S+ +HT V + ++P E
Sbjct: 911 VFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 1087
Query: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
L +GS D V LWD R+ K L+ +H+D++ V W+ + +L S G D +L + S
Sbjct: 1088LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 1261
Score = 55.1 bits (131), Expect = 1e-05
Identities = 72/300 (24%), Positives = 121/300 (40%), Gaps = 32/300 (10%)
Frame = +2
Query: 175 GHQKEGYGLSW--NPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
GH ++W +LS LL+AS D T+ LW+ + K K + GH V+
Sbjct: 428 GHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNVEKNKVKALHC---CRGHAGSVDA 598
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNN-----------------------TSKPSHSV 269
++ + F S + D+ L IW T + T P ++
Sbjct: 599 IAVDS-SGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTL 775
Query: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ-VQWSPH 328
HT ++ + ++ E + + S D T+ +WD+ + LK + +K +F + +SP
Sbjct: 776 SGHTEAISSVLWSDAEE--ICSASWDHTIRVWDVESGGLK-STLTGNK--VFNCISYSPL 940
Query: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
+ LAS TDR + +WD +DG L + HT ++ W+P
Sbjct: 941 CKR-LASGSTDRHIRLWD----------PRTKDGSLVSLSLTS-HTGWVTSVKWSPTHEQ 1084
Query: 389 VICSVSEDNIMQVWQMAE------NIYNDEDPEGSVDPEGQGSRRVCTCDPRLSLFSSEP 442
+ S S DNI+++W ++ ED SVD G D +L +S P
Sbjct: 1085QLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYSYSP 1264
>gb|AF029984.1|AF029984 Lycopersicon esculentum COP1 homolog (COP1) mRNA, complete cds
Length = 2373
Score = 80.1 bits (196), Expect = 4e-13
Identities = 58/209 (27%), Positives = 100/209 (47%)
Frame = +1
Query: 139 IIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASD 198
+ AT S + VFD++ ++P C P + + K LSWN H+ S+
Sbjct: 1192 LFATAGVSRRIKVFDFSSVVNEP-ADAHC-PVVEMSTRSKLSC-LSWNKYTKNHIASSDY 1362
Query: 199 DHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTR 258
D + +WD++ + V++ + H V + S+ S +DD K+ +W T+
Sbjct: 1363 DGIVTVWDVTT---RQSVME----YEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTK 1521
Query: 259 SNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD 318
+ ++D A + C+ +NP S +A GSAD + +DLRN +H F H+
Sbjct: 1522 QEASVL---NIDMK-ANICCVKYNPGSSVHIAVGSADHHIHYYDLRNTSQPVHIFSGHRK 1689
Query: 319 EIFQVQWSPHNETILASSGTDRRLNVWDL 347
+ V++ +NE LAS+ TD L +WD+
Sbjct: 1690 AVSYVKFLSNNE--LASASTDSTLRLWDV 1770
>dbj|AP003588.1|AP003588 Nostoc sp. PCC 7120 DNA, complete genome, section 8/19
Length = 334520
Score = 79.7 bits (195), Expect = 5e-13
Identities = 67/225 (29%), Positives = 118/225 (51%), Gaps = 1/225 (0%)
Frame = -3
Query: 181 YGLSWNPNLSGHLL-SASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLH 239
YG+S+ P G L+ SA+ D T+ +W + + GK + KT+ GH V V++
Sbjct: 131166 YGISFTPQ--GDLIASANADKTVKIWRV----RDGKAL--KTLI-GHDNEVNKVNFSPDG 131014
Query: 240 ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 299
++L S + D + +W+ K ++ HT EV +SF+P + I+A+ SADKT+
Sbjct: 131013 KTL-ASASRDNTVKLWNVSDGKFKK---TLKGHTDEVFWVSFSPDGK-IIASASADKTIR 130849
Query: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA 359
LWD + L + S +H D ++ V ++P + ++LAS+ D+ + +W +
Sbjct: 130848 LWDSFSGNL-IKSLPAHNDLVYSVNFNP-DGSMLASTSADKTVKLW------------RS 130711
Query: 360 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
DG LL GH+ + S++P+ + I S SED +++WQ+
Sbjct: 130710 HDG--HLLHTFSGHSNVVYSSSFSPDGRY-IASASEDKTVKIWQI 130585
Score = 74.3 bits (181), Expect = 2e-11
Identities = 62/231 (26%), Positives = 116/231 (49%)
Frame = -3
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
+ GH++ + ++P+ +L SAS DH+I LWD ++ G+++ TGH+A V
Sbjct: 131937 ITGHEQTVNNVYFSPD-GKNLASASSDHSIKLWDTTS----GQLL---MTLTGHSAGVIT 131782
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
V + +++ ++D+ + +W + K +++ H VN LSF+P + LA+
Sbjct: 131781 VRFSPDGQTIAAG-SEDKTVKLWHRQDGKLLK---TLNGHQDWVNSLSFSPDGK-TLASA 131617
Query: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE 352
SADKT+ LW + + KL + + + H D ++ V +S + I AS+ D + +W+ I
Sbjct: 131616 SADKTIKLWRIADGKL-VKTLKGHNDSVWDVNFSSDGKAI-ASASRDNTIKLWNRHGIEL 131443
Query: 353 EQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
E GH+ + ++ P+ +I S S DN +++WQ
Sbjct: 131442 E---------------TFTGHSGGVYAVNFLPDSN-IIASASLDNTIRLWQ 131338
Score = 49.3 bits (116), Expect = 8e-04
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 28/142 (19%)
Frame = -3
Query: 289 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
+A+GS DKT+ LW R+ +L + H+D ++ V +SP +TI AS G+D+ + +W S
Sbjct: 132129 IASGSLDKTIKLWS-RDGRL-FRTLNGHEDAVYSVSFSPDGQTI-ASGGSDKTIKLWQTS 131959
Query: 349 K-------IGEEQSPEDAEDGPP---------------------ELLFIHGGHTAKISDF 380
G EQ+ + P +LL GH+A +
Sbjct: 131958 DGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITV 131779
Query: 381 SWNPNEPWVICSVSEDNIMQVW 402
++P + I + SED +++W
Sbjct: 131778 RFSP-DGQTIAAGSEDKTVKLW 131716
>ref|NM_128165.1| Arabidopsis thaliana chromosome 2 CHR2v12152001 genomic sequence
Length = 1338
Score = 78.6 bits (192), Expect = 1e-12
Identities = 66/252 (26%), Positives = 116/252 (45%), Gaps = 19/252 (7%)
Frame = +1
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
L GH+ E +SWN + S L + S D ++ +W++ +G D + TGHT V+
Sbjct: 439 LEGHENEVKSVSWNASGSC-LATCSRDKSVWIWEVL----EGNEYDCAAVLTGHTQDVKM 603
Query: 233 VSWHLLHESLFGSVADDQKLMIW-----DTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
V WH + LF S + D + +W D S + H++ V +SFN +
Sbjct: 604 VQWHPTMDVLF-SCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGD- 777
Query: 288 ILATGSADKTVALW--DLRNLK--------LKLHSFESHKDE-IFQVQWSPHNETILASS 336
+ T S D T+ +W D+ ++ + L + + D I+ WS + I+AS
Sbjct: 778 KMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWS--RDDIIASG 951
Query: 337 GTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFI--HGGHTAKISDFSWNPNE-PWVICSV 393
D + ++ SK D+ DGP L + + H ++ W+P E ++ S
Sbjct: 952 AGDNAIRLFVDSK-------HDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASA 1110
Query: 394 SEDNIMQVWQMA 405
S+D ++++WQ+A
Sbjct: 1111SDDGMVKIWQLA 1146
Score = 62.0 bits (149), Expect = 1e-07
Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 15/246 (6%)
Frame = +1
Query: 172 RLRGHQKEGYGLSWNP------NLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIF-T 224
+L GH + ++WNP +S L S S D+T+ +W+ S++ + KT+
Sbjct: 142 KLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSW---TCKTVLEE 312
Query: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY 284
HT V +W + L + + D IW + S +++ H EV +S+N
Sbjct: 313 THTRTVRSCAWSPSGQ-LLATASFDGTTGIWKNYGSEFECIS-TLEGHENEVKSVSWNA- 483
Query: 285 SEFILATGSADKTVALWDLRNLKLKLHSFE------SHKDEIFQVQWSPHNETILASSGT 338
S LAT S DK+V +W++ L+ + ++ H ++ VQW P + +L S
Sbjct: 484 SGSCLATCSRDKSVWIWEV----LEGNEYDCAAVLTGHTQDVKMVQWHPTMD-VLFSCSY 648
Query: 339 DRRLNV-WDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWN-PNEPWVICSVSED 396
D + V W GE Q + + + GH++ + S+N + V C S+D
Sbjct: 649 DNTIKVWWSEDDDGEYQCVQTLGES-------NNGHSSTVWSISFNAAGDKMVTC--SDD 801
Query: 397 NIMQVW 402
+++W
Sbjct: 802 LTLKIW 819
Score = 46.2 bits (108), Expect = 0.006
Identities = 47/198 (23%), Positives = 80/198 (39%), Gaps = 21/198 (10%)
Frame = +1
Query: 269 VDAHTAEVNCLSFNPYSEF------ILATGSADKTVALWDLRNLK----LKLHSFESHKD 318
++ HT V +++NP S ILA+ S D TV +W+ +L K E+H
Sbjct: 145 LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTR 324
Query: 319 EIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKIS 378
+ WSP + +LA++ D +W G E E + GH ++
Sbjct: 325 TVRSCAWSPSGQ-LLATASFDGTTGIW--KNYGSEF----------ECISTLEGHENEVK 465
Query: 379 DFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDPEGQGSRRV---------- 428
SWN + + + S D + +W++ E N+ D + Q + V
Sbjct: 466 SVSWNASGS-CLATCSRDKSVWIWEVLEG--NEYDCAAVLTGHTQDVKMVQWHPTMDVLF 636
Query: 429 -CTCDPRLSLFSSEPRDG 445
C+ D + ++ SE DG
Sbjct: 637 SCSYDNTIKVWWSEDDDG 690
Score = 37.0 bits (84), Expect = 3.9
Identities = 23/107 (21%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Frame = +1
Query: 304 RNLKL-KLHSFESHKDEIFQVQWSPHN------ETILASSGTDRRLNVWDLSKIGEEQSP 356
+NL+L ++ E H D ++ V W+P + ILAS D + +W+ S + +
Sbjct: 115 KNLELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTC 294
Query: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
+ + HT + +W+P+ ++ + S D +W+
Sbjct: 295 KTV---------LEETHTRTVRSCAWSPSGQ-LLATASFDGTTGIWK 405
>dbj|AB044749.1|AB044749 Homo sapiens mRNA for WDC146, complete cds
Length = 4602
Score = 78.6 bits (192), Expect = 1e-12
Identities = 63/209 (30%), Positives = 92/209 (43%), Gaps = 1/209 (0%)
Frame = +1
Query: 195 SASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLF-GSVADDQKLM 253
+ SDD T+ +WD ++ I GH A V+ V WH + GS Q +
Sbjct: 814 TCSDDGTVRIWDFLRCHEE-------RILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIK 972
Query: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 313
WD ++ + H AH V + N ++L T S D L+D+RNLK +L F
Sbjct: 973 FWDPKTGQSLATLH---AHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIRNLKEELQVF 1140
Query: 314 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 373
HK E V W P +E + AS G+D L W +G E+ E G E+ H
Sbjct: 1141RGHKKEATAVAWHPVHEGLFASGGSDGSLLFW---HVGVEK-----EVGGMEM-----AH 1281
Query: 374 TAKISDFSWNPNEPWVICSVSEDNIMQVW 402
I +W+P ++CS S D+ + W
Sbjct: 1282EGMIWSLAWHP-LGHILCSGSNDHTSKFW 1365
Score = 47.8 bits (112), Expect = 0.002
Identities = 45/234 (19%), Positives = 100/234 (42%), Gaps = 2/234 (0%)
Frame = +1
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
L+ H ++W+ N +L+A + W + K +F H + +
Sbjct: 628 LQAHDSPVRAMTWSHN-DMWMLTADHGGYVKYWQSNMNNVK--------MFQAHKEAIRE 780
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
S+ ++ F + +DD + IWD + + + H A+V C+ ++P ++ ++ +G
Sbjct: 781 ASFSPT-DNKFATCSDDGTVRIWDFLRCHEER---ILRGHGADVKCVDWHP-TKGLVVSG 945
Query: 293 SAD--KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
S D + + WD + + L + +HK+ + +V+ + + +L +S D ++D+ +
Sbjct: 946 SKDSQQPIKFWDPKTGQ-SLATLHAHKNTVMEVKLNLNGNWLLTAS-RDHLCKLFDIRNL 1119
Query: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
EE L + GH + + +W+P + S D + W +
Sbjct: 1120KEE-------------LQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHV 1242
Score = 36.6 bits (83), Expect = 5.1
Identities = 21/82 (25%), Positives = 36/82 (43%)
Frame = +1
Query: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDV 233
RGH+KE ++W+P G S D ++ W + + G + A H ++ +
Sbjct: 1141 RGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMA------HEGMIWSL 1302
Query: 234 SWHLLHESLFGSVADDQKLMIW 255
+WH L L S ++D W
Sbjct: 1303 AWHPLGHILC-SGSNDHTSKFW 1365
>gb|AF115313.1|AF115313 Thermomonospora curvata PkwR (pkwR) and PkwA (pkwA) genes, complete
cds
Length = 4619
Score = 77.8 bits (190), Expect = 2e-12
Identities = 69/274 (25%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Frame = +1
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVED 232
L GH ++++P+ L S SDD T+ LWD++A + + +F GHT V D
Sbjct: 3538 LEGHTDWVRAVAFSPD-GALLASGSDDATVRLWDVAAA-------EERAVFEGHTHYVLD 3693
Query: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILAT 291
+++ S+ S + D +W+ + H+V HT V ++F+P + A+
Sbjct: 3694 IAFSP-DGSMVASGSRDGTARLWNVATGT----EHAVLKGHTDYVYAVAFSPDGSMV-AS 3855
Query: 292 GSADKTVALWDLRNLKLK----------------------------------------LH 311
GS D T+ LWD+ K + LH
Sbjct: 3856 GSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALH 4035
Query: 312 SFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHG 371
+FE H D + V +SP +LAS DR + +WD++ E + E
Sbjct: 4036 TFEGHTDWVRAVAFSPDG-ALLASGSDDRTIRLWDVAAQEEHTTLE-------------- 4170
Query: 372 GHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
GHT + +++P E + S SED +++W +A
Sbjct: 4171 GHTEPVHSVAFHP-EGTTLASASEDGTIRIWPIA 4269
Score = 57.8 bits (138), Expect = 2e-06
Identities = 42/158 (26%), Positives = 75/158 (46%), Gaps = 10/158 (6%)
Frame = +1
Query: 258 RSNNTSKPSHSVDAHTA----------EVNCLSFNPYSEFILATGSADKTVALWDLRNLK 307
R ++++ PS S D H E ++F+P +LA GS DK + +WD+ +
Sbjct: 3349 RPDSSTAPSESADPHELNEPRILTTDREAVAVAFSPGGS-LLAGGSGDKLIHVWDVASGD 3525
Query: 308 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELL 367
+LH+ E H D + V +SP + +LAS D + +WD++ E
Sbjct: 3526 -ELHTLEGHTDWVRAVAFSP-DGALLASGSDDATVRLWDVAAAEERA------------- 3660
Query: 368 FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
+ GHT + D +++P+ ++ S S D ++W +A
Sbjct: 3661 -VFEGHTHYVLDIAFSPDGS-MVASGSRDGTARLWNVA 3768
>ref|NM_015426.1| Homo sapiens DKFZP434C245 protein (DKFZP434C245), mRNA
Length = 1359
Score = 77.0 bits (188), Expect = 3e-12
Identities = 68/236 (28%), Positives = 116/236 (48%), Gaps = 1/236 (0%)
Frame = +2
Query: 172 RLRGHQKEGYGLSWNPNLSGHLL-SASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVV 230
R GH+ ++++P SGHLL S S D T+ +W VP V T+F HTA V
Sbjct: 143 RFTGHKDAVTCVNFSP--SGHLLASGSRDKTVRIW----VPN---VKGESTVFRAHTATV 295
Query: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
V + +S F + +DD+ + +W T + K S+ H V C F+P I++
Sbjct: 296 RSVHFCSDGQS-FVTASDDKTVKVWAT---HRQKFLFSLSQHINWVRCAKFSPDGRLIVS 463
Query: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
S DKTV LWD ++ + +HS+ H + V + P + T +A++G D + VWD+
Sbjct: 464 A-SDDKTVKLWD-KSSRECVHSYCEHGGFVTYVDFHP-SGTCIAAAGMDNTVKVWDVR-- 628
Query: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
LL + H+A ++ S++P+ ++I + S D+ +++ + E
Sbjct: 629 ------------THRLLQHYQLHSAAVNGLSFHPSGNYLI-TASSDSTLKILDLME 757
Score = 57.4 bits (137), Expect = 3e-06
Identities = 45/153 (29%), Positives = 73/153 (47%)
Frame = +2
Query: 193 LLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
++SASDD T+ LWD S+ + + H V V +H + + D +
Sbjct: 455 IVSASDDKTVKLWDKSS-------RECVHSYCEHGGFVTYVDFH-PSGTCIAAAGMDNTV 610
Query: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 312
+WD R T + H+A VN LSF+P +++ T S+D T+ + DL +L L++
Sbjct: 611 KVWDVR---THRLLQHYQLHSAAVNGLSFHPSGNYLI-TASSDSTLKILDLMEGRL-LYT 775
Query: 313 FESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
H+ V +S E AS G+D ++ VW
Sbjct: 776 LHGHQGPATTVAFSRTGE-YFASGGSDEQVMVW 871
>gb|BC007417.1|BC007417 Homo sapiens, Similar to RIKEN cDNA 4933430F16 gene, clone MGC:2887
IMAGE:2989835, mRNA, complete cds
Length = 1359
Score = 77.0 bits (188), Expect = 3e-12
Identities = 68/236 (28%), Positives = 116/236 (48%), Gaps = 1/236 (0%)
Frame = +2
Query: 172 RLRGHQKEGYGLSWNPNLSGHLL-SASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVV 230
R GH+ ++++P SGHLL S S D T+ +W VP V T+F HTA V
Sbjct: 143 RFTGHKDAVTCVNFSP--SGHLLASGSRDKTVRIW----VPN---VKGESTVFRAHTATV 295
Query: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
V + +S F + +DD+ + +W T + K S+ H V C F+P I++
Sbjct: 296 RSVHFCSDGQS-FVTASDDKTVKVWAT---HRQKFLFSLSQHINWVRCAKFSPDGRLIVS 463
Query: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
S DKTV LWD ++ + +HS+ H + V + P + T +A++G D + VWD+
Sbjct: 464 A-SDDKTVKLWD-KSSRECVHSYCEHGGFVTYVDFHP-SGTCIAAAGMDNTVKVWDVR-- 628
Query: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAE 406
LL + H+A ++ S++P+ ++I + S D+ +++ + E
Sbjct: 629 ------------THRLLQHYQLHSAAVNGLSFHPSGNYLI-TASSDSTLKILDLME 757
Score = 57.4 bits (137), Expect = 3e-06
Identities = 45/153 (29%), Positives = 73/153 (47%)
Frame = +2
Query: 193 LLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
++SASDD T+ LWD S+ + + H V V +H + + D +
Sbjct: 455 IVSASDDKTVKLWDKSS-------RECVHSYCEHGGFVTYVDFH-PSGTCIAAAGMDNTV 610
Query: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 312
+WD R T + H+A VN LSF+P +++ T S+D T+ + DL +L L++
Sbjct: 611 KVWDVR---THRLLQHYQLHSAAVNGLSFHPSGNYLI-TASSDSTLKILDLMEGRL-LYT 775
Query: 313 FESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
H+ V +S E AS G+D ++ VW
Sbjct: 776 LHGHQGPATTVAFSRTGE-YFASGGSDEQVMVW 871
>ref|NM_005647.1| Homo sapiens transducin (beta)-like 1 (TBL1), mRNA
Length = 5887
Score = 76.3 bits (186), Expect = 6e-12
Identities = 49/182 (26%), Positives = 88/182 (47%), Gaps = 8/182 (4%)
Frame = +2
Query: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSW 235
H+ + L WN ++LSA D T +WD +AK F H+A DV W
Sbjct: 1628 HKGPIFALKWNRK-GNYILSAGVDKTTIIWD-------AHTGEAKQQFPFHSAPALDVDW 1783
Query: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
+ + F S + D + + +P + HT EVN + ++P S +LA+ S D
Sbjct: 1784 Q--NNTTFASCSTDMCIHVCRL---GCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDD 1945
Query: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSP--------HNETILASSGTDRRLNVWDL 347
T+ +W ++ ++ +H ++H EI+ ++WSP ++ +LAS+ D + +WD+
Sbjct: 1946 MTLKIWSMKQ-EVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDI 2122
Query: 348 SK 349
+
Sbjct: 2123 ER 2128
Score = 68.6 bits (166), Expect = 1e-09
Identities = 62/243 (25%), Positives = 107/243 (43%), Gaps = 7/243 (2%)
Frame = +2
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKG--KVVDAKTIFTGHTAV- 229
LRGH+ E + +WNP +S L S S D T +W+++ G ++V I G V
Sbjct: 1328 LRGHESEVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 1504
Query: 230 ----VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
V + W+ + +L + + D IW N S ++ H + L +N
Sbjct: 1505 SNKDVTSLDWN-TNGTLLATGSYDGFARIWTEDGNLAS----TLGQHKGPIFALKWNRKG 1669
Query: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
+IL+ G DKT +WD + K F H V W N T AS TD ++V
Sbjct: 1670 NYILSAG-VDKTTIIWDAHTGEAK-QQFPFHSAPALDVDW--QNNTTFASCSTDMCIHV- 1834
Query: 346 DLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
++G ++ + + GHT +++ W+P+ ++ S S+D +++W M
Sbjct: 1835 --CRLGCDRPVKTFQ-----------GHTNEVNAIKWDPS-GMLLASCSDDMTLKIWSMK 1972
Query: 406 ENI 408
+ +
Sbjct: 1973 QEV 1981
Score = 37.7 bits (86), Expect = 2.3
Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 26/171 (15%)
Frame = +2
Query: 160 KPDPSG----ECNPDLRLR--------------GHQKEGYGLSW--------NPNLSGHL 193
K DPSG C+ D+ L+ H KE Y + W NPN + L
Sbjct: 1901 KWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIML 2080
Query: 194 LSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
SAS D T+ LWDI + V T+ T H V V++ + L S + D+ +
Sbjct: 2081 ASASFDSTVRLWDIE------RGVCTHTL-TKHQEPVYSVAFSPDGKYL-ASGSFDKCVH 2236
Query: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 304
IW+T+S N HS T + + +N + + A+ S D +V + DLR
Sbjct: 2237 IWNTQSGNL---VHSYRG-TGGIFEVCWNARGDKVGASAS-DGSVCVLDLR 2374
>emb|Y12781.1|HSTBL1 Homo sapiens mRNA for transducin (beta) like 1 protein
Length = 5887
Score = 76.3 bits (186), Expect = 6e-12
Identities = 49/182 (26%), Positives = 88/182 (47%), Gaps = 8/182 (4%)
Frame = +2
Query: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSW 235
H+ + L WN ++LSA D T +WD +AK F H+A DV W
Sbjct: 1628 HKGPIFALKWNRK-GNYILSAGVDKTTIIWD-------AHTGEAKQQFPFHSAPALDVDW 1783
Query: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
+ + F S + D + + +P + HT EVN + ++P S +LA+ S D
Sbjct: 1784 Q--NNTTFASCSTDMCIHVCRL---GCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDD 1945
Query: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSP--------HNETILASSGTDRRLNVWDL 347
T+ +W ++ ++ +H ++H EI+ ++WSP ++ +LAS+ D + +WD+
Sbjct: 1946 MTLKIWSMKQ-EVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDI 2122
Query: 348 SK 349
+
Sbjct: 2123 ER 2128
Score = 68.6 bits (166), Expect = 1e-09
Identities = 62/243 (25%), Positives = 107/243 (43%), Gaps = 7/243 (2%)
Frame = +2
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKG--KVVDAKTIFTGHTAV- 229
LRGH+ E + +WNP +S L S S D T +W+++ G ++V I G V
Sbjct: 1328 LRGHESEVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 1504
Query: 230 ----VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
V + W+ + +L + + D IW N S ++ H + L +N
Sbjct: 1505 SNKDVTSLDWN-TNGTLLATGSYDGFARIWTEDGNLAS----TLGQHKGPIFALKWNRKG 1669
Query: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
+IL+ G DKT +WD + K F H V W N T AS TD ++V
Sbjct: 1670 NYILSAG-VDKTTIIWDAHTGEAK-QQFPFHSAPALDVDW--QNNTTFASCSTDMCIHV- 1834
Query: 346 DLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
++G ++ + + GHT +++ W+P+ ++ S S+D +++W M
Sbjct: 1835 --CRLGCDRPVKTFQ-----------GHTNEVNAIKWDPS-GMLLASCSDDMTLKIWSMK 1972
Query: 406 ENI 408
+ +
Sbjct: 1973 QEV 1981
Score = 37.7 bits (86), Expect = 2.3
Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 26/171 (15%)
Frame = +2
Query: 160 KPDPSG----ECNPDLRLR--------------GHQKEGYGLSW--------NPNLSGHL 193
K DPSG C+ D+ L+ H KE Y + W NPN + L
Sbjct: 1901 KWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIML 2080
Query: 194 LSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
SAS D T+ LWDI + V T+ T H V V++ + L S + D+ +
Sbjct: 2081 ASASFDSTVRLWDIE------RGVCTHTL-TKHQEPVYSVAFSPDGKYL-ASGSFDKCVH 2236
Query: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 304
IW+T+S N HS T + + +N + + A+ S D +V + DLR
Sbjct: 2237 IWNTQSGNL---VHSYRG-TGGIFEVCWNARGDKVGASAS-DGSVCVLDLR 2374
>dbj|AB025245.1|AB025245 Xenopus laevis mRNA for coronin homolog, complete cds,
clone:Xcoronin A
Length = 1918
Score = 76.3 bits (186), Expect = 6e-12
Identities = 56/249 (22%), Positives = 112/249 (44%), Gaps = 17/249 (6%)
Frame = +1
Query: 166 ECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTG 225
+C D+R+ + + NPN ++ AS + + K G++ A G
Sbjct: 238 QCYDDIRVSRVTWDSSFCAVNPNFVAIIIEASGGGAFLVLPLQ---KSGRIDKAYPTVCG 408
Query: 226 HTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHS----VDAHTAEVNCLSF 281
HT V D+ W ++++ S ++D +M+W N + P ++ H+ V +++
Sbjct: 409 HTGPVLDIDWCPHNDNVIASGSEDCTVMVWQIPENGLTIPLTDPVVVLEGHSKRVGIVTW 588
Query: 282 NPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 341
+P + +L + D + +W++ + ++ + H D I+ V W+ N +++ ++G D++
Sbjct: 589 HPTARNVLLSAGCDNAIIIWNVGTGEPLINLEDMHNDMIYSVCWN-RNGSLICTAGKDKK 765
Query: 342 LNVWDLSKIGEEQSPEDAEDG--PPELLFIHGGH--TAKISDFS------WNP---NEPW 388
L V D K+ E A +G P +F+ G+ T S S WNP +EP
Sbjct: 766 LLVIDPRKMEVVSEKEKAHEGARPMRAIFLSDGNVFTTGFSRMSERQLALWNPKNMDEPI 945
Query: 389 VICSVSEDN 397
+ + N
Sbjct: 946 ALHEMDTSN 972
Score = 49.3 bits (116), Expect = 8e-04
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 7/135 (5%)
Frame = +1
Query: 316 HKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGP-PELLFIHGGHT 374
H + + W PHN+ ++AS D + VW Q PE+ P + + + GH+
Sbjct: 409 HTGPVLDIDWCPHNDNVIASGSEDCTVMVW--------QIPENGLTIPLTDPVVVLEGHS 564
Query: 375 AKISDFSWNPNEPWVICSVSEDNIMQVWQM--AENIYNDEDPEG----SVDPEGQGSRRV 428
++ +W+P V+ S DN + +W + E + N ED SV GS +
Sbjct: 565 KRVGIVTWHPTARNVLLSAGCDNAIIIWNVGTGEPLINLEDMHNDMIYSVCWNRNGS-LI 741
Query: 429 CTCDPRLSLFSSEPR 443
CT L +PR
Sbjct: 742 CTAGKDKKLLVIDPR 786
Score = 38.5 bits (88), Expect = 1.3
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +1
Query: 372 GHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAEN 407
GHT + D W P+ VI S SED + VWQ+ EN
Sbjct: 406 GHTGPVLDIDWCPHNDNVIASGSEDCTVMVWQIPEN 513
>ref|NM_064584.1| six WD40 repeats
Length = 2430
Score = 76.3 bits (186), Expect = 6e-12
Identities = 60/246 (24%), Positives = 101/246 (40%), Gaps = 23/246 (9%)
Frame = +1
Query: 180 GYGLSWNPNLSG-HLLSA---------------------SDDHTICLWDISAVPKKGKVV 217
GY W PN++ H+ SA SDD T +WD + ++
Sbjct: 589 GYVKYWQPNMNNAHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEE---- 756
Query: 218 DAKTIFTGHTAVVEDVSWHLLHESLF-GSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEV 276
+ GH A V + WH + GS Q + IWD +S + ++ H + V
Sbjct: 757 ---RVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSCLA---TLQEHKSSV 918
Query: 277 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
+ FN ++L TG D V ++D+R +K ++ ++ +HK E+ + W P +E + S
Sbjct: 919 MAVEFNKNGNWLL-TGGRDHLVKMYDIRMMK-EMRTYRAHKKEVISLAWHPIHEGLFVSG 1092
Query: 337 GTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
G D + W + DG E+ + H I W+P ++ + S D
Sbjct: 1093GGDGSIVYWMV-------------DGEKEIGLLEHAHDQAIWSMKWHP-LGHILATGSND 1230
Query: 397 NIMQVW 402
N + W
Sbjct: 1231NNTKFW 1248
>ref|XM_010334.6| Homo sapiens similar to transducin (beta)-like 1 (H. sapiens)
(LOC159035), mRNA
Length = 5839
Score = 76.3 bits (186), Expect = 6e-12
Identities = 49/182 (26%), Positives = 88/182 (47%), Gaps = 8/182 (4%)
Frame = +3
Query: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSW 235
H+ + L WN ++LSA D T +WD +AK F H+A DV W
Sbjct: 1596 HKGPIFALKWNRK-GNYILSAGVDKTTIIWD-------AHTGEAKQQFPFHSAPALDVDW 1751
Query: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
+ + F S + D + + +P + HT EVN + ++P S +LA+ S D
Sbjct: 1752 Q--NNTTFASCSTDMCIHVCRL---GCDRPVKTFQGHTNEVNAIKWDP-SGMLLASCSDD 1913
Query: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSP--------HNETILASSGTDRRLNVWDL 347
T+ +W ++ ++ +H ++H EI+ ++WSP ++ +LAS+ D + +WD+
Sbjct: 1914 MTLKIWSMKQ-EVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDI 2090
Query: 348 SK 349
+
Sbjct: 2091 ER 2096
Score = 68.6 bits (166), Expect = 1e-09
Identities = 62/243 (25%), Positives = 107/243 (43%), Gaps = 7/243 (2%)
Frame = +3
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKKG--KVVDAKTIFTGHTAV- 229
LRGH+ E + +WNP +S L S S D T +W+++ G ++V I G V
Sbjct: 1296 LRGHESEVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 1472
Query: 230 ----VEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
V + W+ + +L + + D IW N S ++ H + L +N
Sbjct: 1473 SNKDVTSLDWN-TNGTLLATGSYDGFARIWTEDGNLAS----TLGQHKGPIFALKWNRKG 1637
Query: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
+IL+ G DKT +WD + K F H V W N T AS TD ++V
Sbjct: 1638 NYILSAG-VDKTTIIWDAHTGEAK-QQFPFHSAPALDVDW--QNNTTFASCSTDMCIHV- 1802
Query: 346 DLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
++G ++ + + GHT +++ W+P+ ++ S S+D +++W M
Sbjct: 1803 --CRLGCDRPVKTFQ-----------GHTNEVNAIKWDPS-GMLLASCSDDMTLKIWSMK 1940
Query: 406 ENI 408
+ +
Sbjct: 1941 QEV 1949
Score = 37.7 bits (86), Expect = 2.3
Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 26/171 (15%)
Frame = +3
Query: 160 KPDPSG----ECNPDLRLR--------------GHQKEGYGLSW--------NPNLSGHL 193
K DPSG C+ D+ L+ H KE Y + W NPN + L
Sbjct: 1869 KWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIML 2048
Query: 194 LSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
SAS D T+ LWDI + V T+ T H V V++ + L S + D+ +
Sbjct: 2049 ASASFDSTVRLWDIE------RGVCTHTL-TKHQEPVYSVAFSPDGKYL-ASGSFDKCVH 2204
Query: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 304
IW+T+S N HS T + + +N + + A+ S D +V + DLR
Sbjct: 2205 IWNTQSGNL---VHSYRG-TGGIFEVCWNARGDKVGASAS-DGSVCVLDLR 2342
>gb|U49437.1|BGU49437 Biomphalaria glabrata RACK mRNA, complete cds
Length = 1235
Score = 75.5 bits (184), Expect = 1e-11
Identities = 75/291 (25%), Positives = 129/291 (43%), Gaps = 1/291 (0%)
Frame = +2
Query: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 182
H G V + PQ P +I + + ++V+ T+ S G L GH
Sbjct: 101 HGGWVTQIATTPQYPDMILSASRDKSLIVWRLTRDESS---YGVPQKSLHGHGHFVSDVI 271
Query: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
LS + + LS S DHT+ LWD+S + F GHT V V++ + +
Sbjct: 272 LSSDGQFA---LSGSWDHTLRLWDLSTGQTTRR-------FVGHTKDVLSVAFSADNRQI 421
Query: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF-ILATGSADKTVALW 301
S + D+ + +W+T K + D HT +C+ F+P ++ I+ + D+ V +W
Sbjct: 422 V-SGSRDKTIKLWNTL--GVCKYTIQDDCHTDWTSCVRFSPNTQNPIIVSSGWDRLVKVW 592
Query: 302 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAED 361
+L N KLK + + H + V SP + ++ AS G D + +WDL++
Sbjct: 593 NLTNCKLKTNHY-GHTGYVNTVTVSP-DGSLCASGGKDSQAMLWDLNE------------ 730
Query: 362 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE 412
+ L+ G I+ ++PN W +C S +I ++W + + DE
Sbjct: 731 --GKHLYTLDGAGDTINALCFSPNRYW-LCVASGPSI-KIWDLEGKVVVDE 871
Score = 62.0 bits (149), Expect = 1e-07
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 8/242 (3%)
Frame = +2
Query: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDIS------AVPKKGKVVDAKTIFTGH 226
L+GH ++ P +LSAS D ++ +W ++ VP+K GH
Sbjct: 92 LQGHGGWVTQIATTPQYPDMILSASRDKSLIVWRLTRDESSYGVPQKS--------LHGH 247
Query: 227 TAVVEDVSWHLLHESLFG-SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYS 285
V DV L + F S + D L +WD + T++ HT +V ++F+ +
Sbjct: 248 GHFVSDVI--LSSDGQFALSGSWDHTLRLWDLSTGQTTR---RFVGHTKDVLSVAFSADN 412
Query: 286 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET-ILASSGTDRRLNV 344
I+ +GS DKT+ LW+ + + H D V++SP+ + I+ SSG DR + V
Sbjct: 413 RQIV-SGSRDKTIKLWNTLGVCKYTIQDDCHTDWTSCVRFSPNTQNPIIVSSGWDRLVKV 589
Query: 345 WDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
W+L+ +L H GHT ++ + +P+ + S +D+ +W +
Sbjct: 590 WNLTNC--------------KLKTNHYGHTGYVNTVTVSPDGS-LCASGGKDSQAMLWDL 724
Query: 405 AE 406
E
Sbjct: 725 NE 730
>emb|AJ131817.1|SCO131817 Streptomyces coelicolor wdpA gene
Length = 4910
Score = 75.5 bits (184), Expect = 1e-11
Identities = 65/230 (28%), Positives = 111/230 (48%), Gaps = 4/230 (1%)
Frame = +1
Query: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 182
H V+ A + P + A+ + + ++D T P +P P G L GH Y
Sbjct: 2509 HTSWVSTAVFSPDGRTL-ASASDDGTIRLWDVTD-PGRPRPLGA-----PLDGHGGTVYL 2667
Query: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
L+++P+ L SA DDH + LW+++ + +A TG T V V++ ++L
Sbjct: 2668 LAFSPD-GRTLASAHDDHAVRLWNVA----DRRAPEALDTLTGSTGAVRSVAFSPDGDTL 2832
Query: 243 FGSVADDQKLMIWDTRSNNTSKPSHS-VDAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
S DD K+ +WD +P+ + + H+ V+ ++F+P LA+GSAD TV LW
Sbjct: 2833 -ASGGDDDKVRLWDVSDPRRPEPAGAPLAGHSGLVHSVAFSPDGH-TLASGSADDTVQLW 3006
Query: 302 DLRN---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
D+ + K H ++ V +SP + +LA S D ++W++S
Sbjct: 3007 DVTDPAGAKPVGAPLTGHSGPVWAVAFSP-DGAMLAVSSADSTASLWNVS 3153
Score = 55.1 bits (131), Expect = 1e-05
Identities = 66/231 (28%), Positives = 101/231 (43%), Gaps = 11/231 (4%)
Frame = +1
Query: 158 PSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLL-SASDDHTICLWDISAVPKKGKV 216
P +P+P+G L GH + ++++P+ GH L S S D T+ LWD++ P K
Sbjct: 2881 PRRPEPAGA-----PLAGHSGLVHSVAFSPD--GHTLASGSADDTVQLWDVTD-PAGAKP 3036
Query: 217 VDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHS------VD 270
V A TGH+ V V++ L S AD +W N S P++ +
Sbjct: 3037 VGAP--LTGHSGPVWAVAFSPDGAMLAVSSADSTA-SLW-----NVSDPAYPSQVGVPLA 3192
Query: 271 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE 330
+ E+ L F+P LATGS D V LW L D I ++ +
Sbjct: 3193 GGSGEMYALGFSPDGH-TLATGSGDSKVRLWSLPT-----------SDMIGRIGAFRPDG 3336
Query: 331 TILASSGTDRRLNVWDLSKIGEEQS---PEDAEDGP-PELLFIHGGHTAKI 377
+LA++ D R+ +WD++ G S P + DG L+F G T +
Sbjct: 3337 HVLATAARDGRVRLWDVTDPGRPVSLSAPFEPGDGDIRSLVFSPDGGTLAV 3489
Score = 52.4 bits (124), Expect = 9e-05
Identities = 51/183 (27%), Positives = 80/183 (42%), Gaps = 2/183 (1%)
Frame = +1
Query: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 182
H G VN + P + A+ V ++D T DP+ GH
Sbjct: 3715 HSGYVNTLAFSPDGRTL-ASGGADDAVRLWDVT------DPAHATRLGAARTGHLGPVNV 3873
Query: 183 LSWNPNLSGHLL-SASDDHTICLWDISAVPKKGKVVDAKTIFTGHTAVVEDVSWHLLHES 241
L+++P+ GH L S SDD T+ LWD++ + G+ T GHT V +++ ++
Sbjct: 3874 LAYSPD--GHTLASGSDDGTVRLWDVT---EPGEGSGGGTTLAGHTDSVVSLTFSQDGDT 4038
Query: 242 LFGSVADDQKLMIWDTRSNNTSKP-SHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
L S A+D + +W + P ++ + N LSF+P S +L S TV L
Sbjct: 4039 L-ASGANDNTVRLWSVTDPAEAAPIGRAMSPNAKTGNFLSFSPVSH-MLGVSSGTDTVRL 4212
Query: 301 WDL 303
W L
Sbjct: 4213 W