TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(737 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,165,784 sequences; 601,717,568 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_008937.1| Mus musculus prospero-related homeobox 1 (... 1330 0.0
gb|AF061576.1|AF061576 Mus musculus prospero-related homeob... 1330 0.0
ref|XM_001994.4| Homo sapiens prospero-related homeobox 1 (... 1311 0.0
ref|NM_002763.1| Homo sapiens prospero-related homeobox 1 (... 1295 0.0
gb|U44060.1|HSU44060 Human homeodomain protein (Prox 1) mRN... 1295 0.0
gb|U46563.1|GGU46563 Gallus gallus homeodomain protein (Pro... 1247 0.0
dbj|AB008773.1|AB008773 Xenopus laevis Prox 1 mRNA, complet... 1170 0.0
gb|AY032595.1| Danio rerio prospero-related homeodomain pro... 1088 0.0
gb|AF063018.1|AF063018 Danio rerio homeodomain protein (Pro... 1085 0.0
dbj|AB008774.1|AB008774 Cynops pyrrhogaster mRNA, partial cds 1078 0.0
emb|AL606537.10|AL606537 Human DNA sequence from clone RP11... 981 0.0
gb|AC011700.5|AC011700 Homo sapiens Chromosome 1 BAC RP11-4... 981 0.0
gb|AF070733.1|AF070733 Notophthalmus viridescens transcript... 551 e-154
gb|AF069290.1|AF069290 Xenopus laevis Prox1 mRNA, partial cds 262 1e-67
ref|XM_063420.1| Homo sapiens similar to HOMEOBOX PROSPERO-... 220 4e-55
gb|AY060680.1| Drosophila melanogaster GH11848 full length ... 212 1e-52
ref|NM_079593.1| Drosophila melanogaster prospero (pros), mRNA 211 3e-52
emb|Z11743.1|DMPROSPER D. melanogaster prospero gene encodi... 211 3e-52
gb|M81389.1|DROPROS D.melanogaster Pros protein (prospero) ... 211 3e-52
ref|XM_081366.1| prospero, mRNA 211 3e-52
dbj|D10609.1|DROPROSA Drosophila melanogaster mRNA for pros... 211 3e-52
ref|NM_066359.1| Caenorhabditis elegans 210 5e-52
gb|AC006530.4|AC006530 Homo sapiens chromosome 14 clone BAC... 114 3e-23
gb|U40760.1|FRU40760 Fugu rubripes prospero_like protein ge... 105 2e-20
gb|L14331.1| Caenorhabditis elegans cosmid K12H4, complete ... 88 3e-15
gb|AF190405.1|AF190405 Drosophila virilis homeodomain trans... 78 4e-12
gb|AE003691.2|AE003691 Drosophila melanogaster genomic scaf... 78 4e-12
gb|AC007710.11|AC007710 Drosophila melanogaster, chromosome... 78 4e-12
gb|AC008358.4|AC008358 Drosophila melanogaster, chromosome ... 78 4e-12
gb|AF190403.1|AF190403 Drosophila melanogaster homeodomain ... 78 4e-12
gb|AC007709.4|AC007709 Drosophila melanogaster, chromosome ... 75 2e-11
ref|XM_063419.1| Homo sapiens similar to homeobox prospero-... 53 1e-04
dbj|AK006828.1|AK006828 Mus musculus adult male testis cDNA... 47 0.007
gb|AY040548.1| Ateles belzebuth chamek prospero-related hom... 45 0.026
emb|AJ299062.1|CAR299062 Cicer arietinum partial mRNA for h... 41 0.38
gb|AC010974.8|AC010974 Homo sapiens clone RP11-159N20, comp... 39 2.5
ref|XM_092432.1| Homo sapiens similar to Nck-associated pro... 39 2.5
gb|AF110377.1|AF110377 Homo sapiens PCAF-associated factor ... 37 7.2
ref|NM_003496.1| Homo sapiens transformation/transcription ... 37 7.2
gb|AF076974.1|AF076974 Homo sapiens TRRAP protein (TRRAP) m... 37 7.2
ref|XM_018373.2| Homo sapiens transformation/transcription ... 37 7.2
gb|AC005153.1|AC005153 Homo sapiens PAC clone RP4-537P9 fro... 37 9.4
>ref|NM_008937.1| Mus musculus prospero-related homeobox 1 (Prox1), mRNA
Length = 2520
Score = 1330 bits (3443), Expect = 0.0
Identities = 674/737 (91%), Positives = 674/737 (91%)
Frame = +2
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 68 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 247
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 248 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 427
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 428 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 607
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
SVALRGNENEREMAPQSVSPRESYREN LVSA
Sbjct: 608 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 787
Query: 241 XXXXDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMC
Sbjct: 788 QQLEDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMC 967
Query: 301 ELDPGQFIDRARALIREQEMAENKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNTAM 360
ELDPGQFIDRARALIREQEMAENKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNTAM
Sbjct: 968 ELDPGQFIDRARALIREQEMAENKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNTAM 1147
Query: 361 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 420
SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 1148SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 1327
Query: 421 LDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSF 480
LDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSF
Sbjct: 1328LDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSF 1507
Query: 481 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXXX 540
RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPE KM
Sbjct: 1508RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 1687
Query: 541 XXXXXTAEGLSLSLIKSECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 600
TAEGLSLSLIKSECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS
Sbjct: 1688AHPPSTAEGLSLSLIKSECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 1867
Query: 601 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 660
NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE
Sbjct: 1868NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 2047
Query: 661 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 720
LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE
Sbjct: 2048LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 2227
Query: 721 VPEIFKSPNCLQELLHE 737
VPEIFKSPNCLQELLHE
Sbjct: 2228VPEIFKSPNCLQELLHE 2278
>gb|AF061576.1|AF061576 Mus musculus prospero-related homeobox 1 (Prox1) mRNA, complete cds
Length = 2520
Score = 1330 bits (3443), Expect = 0.0
Identities = 674/737 (91%), Positives = 674/737 (91%)
Frame = +2
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 68 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 247
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 248 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 427
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 428 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 607
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
SVALRGNENEREMAPQSVSPRESYREN LVSA
Sbjct: 608 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 787
Query: 241 XXXXDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMC
Sbjct: 788 QQLEDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMC 967
Query: 301 ELDPGQFIDRARALIREQEMAENKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNTAM 360
ELDPGQFIDRARALIREQEMAENKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNTAM
Sbjct: 968 ELDPGQFIDRARALIREQEMAENKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNTAM 1147
Query: 361 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 420
SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 1148SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 1327
Query: 421 LDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSF 480
LDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSF
Sbjct: 1328LDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSF 1507
Query: 481 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXXX 540
RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPE KM
Sbjct: 1508RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 1687
Query: 541 XXXXXTAEGLSLSLIKSECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 600
TAEGLSLSLIKSECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS
Sbjct: 1688AHPPSTAEGLSLSLIKSECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 1867
Query: 601 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 660
NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE
Sbjct: 1868NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 2047
Query: 661 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 720
LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE
Sbjct: 2048LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 2227
Query: 721 VPEIFKSPNCLQELLHE 737
VPEIFKSPNCLQELLHE
Sbjct: 2228VPEIFKSPNCLQELLHE 2278
>ref|XM_001994.4| Homo sapiens prospero-related homeobox 1 (PROX1), mRNA
Length = 2927
Score = 1311 bits (3393), Expect = 0.0
Identities = 662/737 (89%), Positives = 670/737 (90%)
Frame = +3
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 609 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 788
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 789 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 968
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFD+DRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 969 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 1148
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
SVALRGNENEREMAPQSVSPRESYREN LVSA
Sbjct: 1149 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 1328
Query: 241 XXXXDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQLRQLQEKFYQ+YDSTDSENDEDG+LSEDSMRSEILDARAQDSVGRSDNEMC
Sbjct: 1329 QQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 1508
Query: 301 ELDPGQFIDRARALIREQEMAENKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNTAM 360
ELDPGQFIDRARALIREQEMAENKPKREG+NKERDHGPNSLQPEGKHLAETLKQELNTAM
Sbjct: 1509 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 1688
Query: 361 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 420
SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 1689 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 1868
Query: 421 LDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSF 480
LDTFG+VQM SSTDQTEALPLVVRKNSS+QSASGPA GGHHQPLHQSPLSAT GFTT +F
Sbjct: 1869 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASGPAAGGHHQPLHQSPLSATTGFTTSTF 2048
Query: 481 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXXX 540
RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPE KM
Sbjct: 2049 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 2228
Query: 541 XXXXXTAEGLSLSLIKSECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 600
TAEGLSLSLIKSECGDLQDMS+ISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS
Sbjct: 2229 AHPPSTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 2408
Query: 601 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 660
NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE
Sbjct: 2409 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 2588
Query: 661 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 720
LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE
Sbjct: 2589 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 2768
Query: 721 VPEIFKSPNCLQELLHE 737
VPEIFKSPNCLQELLHE
Sbjct: 2769 VPEIFKSPNCLQELLHE 2819
>ref|NM_002763.1| Homo sapiens prospero-related homeobox 1 (PROX1), mRNA
Length = 2924
Score = 1295 bits (3350), Expect = 0.0
Identities = 656/737 (89%), Positives = 665/737 (90%)
Frame = +1
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 607 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 786
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 787 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 966
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFD+DRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 967 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 1146
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
SVALRGNENEREMAPQSVSPRESYREN LVSA
Sbjct: 1147 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 1326
Query: 241 XXXXDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQL +QEKFYQ+YDSTDSENDEDG+LSEDSMRSEILDARAQDSVGRSDNEMC
Sbjct: 1327 QQLEDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 1506
Query: 301 ELDPGQFIDRARALIREQEMAENKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNTAM 360
ELDPGQFIDRARALIREQEMAENKPKREG+NKERDHGPNSLQPEGKHLAETLKQELNTAM
Sbjct: 1507 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 1686
Query: 361 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 420
SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 1687 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 1866
Query: 421 LDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSF 480
LDTFG+VQM SSTDQTEALPLVVRKNSS+QSASG GGHHQPLHQSPLSAT GFTT +F
Sbjct: 1867 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASG-LVGGHHQPLHQSPLSATTGFTTSTF 2043
Query: 481 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXXX 540
RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPE KM
Sbjct: 2044 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 2223
Query: 541 XXXXXTAEGLSLSLIKSECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 600
TAEGLSLSLIKSECGDLQDMS+ISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS
Sbjct: 2224 AHPPSTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 2403
Query: 601 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 660
NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE
Sbjct: 2404 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 2583
Query: 661 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 720
LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE
Sbjct: 2584 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 2763
Query: 721 VPEIFKSPNCLQELLHE 737
VPE FKSPNCLQELLHE
Sbjct: 2764 VPEFFKSPNCLQELLHE 2814
>gb|U44060.1|HSU44060 Human homeodomain protein (Prox 1) mRNA, complete cds
Length = 2924
Score = 1295 bits (3350), Expect = 0.0
Identities = 656/737 (89%), Positives = 665/737 (90%)
Frame = +1
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 607 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 786
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 787 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 966
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFD+DRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 967 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 1146
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
SVALRGNENEREMAPQSVSPRESYREN LVSA
Sbjct: 1147 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 1326
Query: 241 XXXXDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQL +QEKFYQ+YDSTDSENDEDG+LSEDSMRSEILDARAQDSVGRSDNEMC
Sbjct: 1327 QQLEDMQKQLLHVQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 1506
Query: 301 ELDPGQFIDRARALIREQEMAENKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNTAM 360
ELDPGQFIDRARALIREQEMAENKPKREG+NKERDHGPNSLQPEGKHLAETLKQELNTAM
Sbjct: 1507 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 1686
Query: 361 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 420
SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 1687 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 1866
Query: 421 LDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSF 480
LDTFG+VQM SSTDQTEALPLVVRKNSS+QSASG GGHHQPLHQSPLSAT GFTT +F
Sbjct: 1867 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASG-LVGGHHQPLHQSPLSATTGFTTSTF 2043
Query: 481 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXXX 540
RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPE KM
Sbjct: 2044 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 2223
Query: 541 XXXXXTAEGLSLSLIKSECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 600
TAEGLSLSLIKSECGDLQDMS+ISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS
Sbjct: 2224 AHPPSTAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 2403
Query: 601 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 660
NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE
Sbjct: 2404 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 2583
Query: 661 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 720
LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE
Sbjct: 2584 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 2763
Query: 721 VPEIFKSPNCLQELLHE 737
VPE FKSPNCLQELLHE
Sbjct: 2764 VPEFFKSPNCLQELLHE 2814
>gb|U46563.1|GGU46563 Gallus gallus homeodomain protein (Prox 1) mRNA, complete cds
Length = 3322
Score = 1247 bits (3226), Expect = 0.0
Identities = 631/737 (85%), Positives = 648/737 (87%)
Frame = +2
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 68 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 247
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEK NVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 248 HADGEKPNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 427
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQED+CSNSSRDSP ECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 428 SEVHQEDVCSNSSRDSPQECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 607
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
VALRGNENERE+ PQSVSPRESYREN LVSA
Sbjct: 608 RVALRGNENEREIRPQSVSPRESYRENKRKQNWPQQQQQSFQQLVSARKEQKREERRQLK 787
Query: 241 XXXXDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQLRQLQE+FYQ+YDSTDSENDEDG+LSED MRSE +DA+A DSVGRSDNEMC
Sbjct: 788 QQLEDMQKQLRQLQEEFYQIYDSTDSENDEDGNLSEDRMRSETVDAQAGDSVGRSDNEMC 967
Query: 301 ELDPGQFIDRARALIREQEMAENKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNTAM 360
ELDPGQFIDRARALIREQE+ ENKPKREG KE+D GPNS PEGKHLAETLKQELNTAM
Sbjct: 968 ELDPGQFIDRARALIREQEIGENKPKREGP-KEKDQGPNSFHPEGKHLAETLKQELNTAM 1144
Query: 361 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 420
SQVVDTVVKVFS+KPSRQ+PQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 1145SQVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 1324
Query: 421 LDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSF 480
LDTF SV MP +TDQT+ALPLVVRKNSS+Q AS P GGHH LHQSPLSATAGF+T SF
Sbjct: 1325LDTFSSVPMPGATDQTDALPLVVRKNSSDQPASAPPAGGHHASLHQSPLSATAGFSTSSF 1504
Query: 481 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXXX 540
RHPFPLPLMAYPFQSPLGAPS SF GK+RASPE KM
Sbjct: 1505RHPFPLPLMAYPFQSPLGAPSASFPGKERASPESLDLTRETTSLRTKMSSHHMNHHPCSP 1684
Query: 541 XXXXXTAEGLSLSLIKSECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 600
AEGLSLSLIKSECGDLQDMS+ISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS
Sbjct: 1685AHPPSAAEGLSLSLIKSECGDLQDMSEISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSS 1864
Query: 601 NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 660
NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE
Sbjct: 1865NMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 2044
Query: 661 LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 720
LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE
Sbjct: 2045LYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSE 2224
Query: 721 VPEIFKSPNCLQELLHE 737
VPEIFKSPNCLQELLHE
Sbjct: 2225VPEIFKSPNCLQELLHE 2275
>dbj|AB008773.1|AB008773 Xenopus laevis Prox 1 mRNA, complete cds
Length = 2483
Score = 1170 bits (3027), Expect = 0.0
Identities = 591/740 (79%), Positives = 632/740 (84%), Gaps = 3/740 (0%)
Frame = +1
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDST LLSRQTKRRRVDIGVKRTVGTASAFFAKA ATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 1 MPDHDSTGLLSRQTKRRRVDIGVKRTVGTASAFFAKASATFFSAMNPQGSEQDVEYSVVQ 180
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKN GTEPSFQASGLSS G
Sbjct: 181 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNCGTEPSFQASGLSSAG 360
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SE+HQED C NSSRDSP ECLSPFGRPTM+Q+D+DRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 361 SEIHQEDACINSSRDSPQECLSPFGRPTMNQYDMDRLCDEHLRAKRARVENIIRGMSHSP 540
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
+VALRGNEN+R+ AP+S+SPRESYREN LVSA
Sbjct: 541 NVALRGNENDRDGAPRSISPRESYRENRRKQKLPQQQQQSFQELVSARKEQKREERRQLK 720
Query: 241 XXXXDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQLRQLQEKFYQ+YDSTDSEN+EDG+LSED M SEI+DARAQDS+GRS+NEM
Sbjct: 721 QQLEDMQKQLRQLQEKFYQIYDSTDSENNEDGNLSEDGMHSEIIDARAQDSMGRSNNEMF 900
Query: 301 ELDPGQFIDRARALIREQEMA-ENKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNTA 359
+LDPGQFIDRARALIRE ++A +N K++ K++D+ + QPEGKHLAE LKQELN A
Sbjct: 901 DLDPGQFIDRARALIREHQIASDNHHKKDAPPKDKDNLHHPFQPEGKHLAEALKQELNAA 1080
Query: 360 MSQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPN 419
M+QVVDTVVKVFSAKP RQ+PQVFPPLQIPQARFA+NGE+HNFHTANQRLQCFGDVIIPN
Sbjct: 1081MAQVVDTVVKVFSAKPIRQLPQVFPPLQIPQARFAINGEHHNFHTANQRLQCFGDVIIPN 1260
Query: 420 PLDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPS 479
PLDTF +V MPSSTDQTEALPLVVRKNS++QSASGP G HH LHQSPLSA A F++ S
Sbjct: 1261PLDTFSNVPMPSSTDQTEALPLVVRKNSNDQSASGPPPGSHHPSLHQSPLSAAASFSSSS 1440
Query: 480 FRHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXX 539
FRHPFPLPLMAYPFQ+PLGAP SF GKD +SPE KM
Sbjct: 1441FRHPFPLPLMAYPFQNPLGAPFISFQGKDSSSPESLDLTRETTSLRTKMSSHHMNHHPCS 1620
Query: 540 XXXXXXTAEGLSLSLIKSECGDLQDMSDISPYSGSA--MQEGLSPNHLKKAKLMFFYTRY 597
+ EGLSLS IKSECGD+QDMSDISPYSGSA MQEGLSPNHLKKAKLMFFYTRY
Sbjct: 1621PAHPPSSTEGLSLSFIKSECGDMQDMSDISPYSGSALYMQEGLSPNHLKKAKLMFFYTRY 1800
Query: 598 PSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITR 657
PSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDG+TSTEEL ITR
Sbjct: 1801PSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGITSTEELCITR 1980
Query: 658 DCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKL 717
DCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWK AIYKVICKL
Sbjct: 1981DCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKNAIYKVICKL 2160
Query: 718 DSEVPEIFKSPNCLQELLHE 737
DSEVP+IF+SPNCLQELLHE
Sbjct: 2161DSEVPDIFRSPNCLQELLHE 2220
>gb|AY032595.1| Danio rerio prospero-related homeodomain protein 1 (prox1) mRNA,
complete cds
Length = 2839
Score = 1088 bits (2815), Expect = 0.0
Identities = 562/742 (75%), Positives = 608/742 (81%), Gaps = 5/742 (0%)
Frame = +1
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDST+LLSRQTKRRRVDIGVKRTVG AS F +A+ATF SAMNP GSEQDVE SVVQ
Sbjct: 58 MPDHDSTSLLSRQTKRRRVDIGVKRTVGQASVVFTRAKATFLSAMNPHGSEQDVECSVVQ 237
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDA+MPFPGATIISQLLKNN+ KNGG+EP+FQ SGLSSTG
Sbjct: 238 HADGEKSNVLRKLLKRANSYEDAVMPFPGATIISQLLKNNLTKNGGSEPNFQGSGLSSTG 417
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SE+ QED CSNSSR SP ECLSPF RP+M+QF+++RL DEHLRAKRARVENIIRGMSHSP
Sbjct: 418 SEMQQEDACSNSSRGSPQECLSPFSRPSMTQFEMERLTDEHLRAKRARVENIIRGMSHSP 597
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
SV LR +N+RE A Q SPRE+YREN LVSA
Sbjct: 598 SVTLRAGDNDREGAAQPPSPRENYRENKRKQKLPQQQQQSFQQLVSARKEQKHEERRQLK 777
Query: 241 XXXXDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSV-GRSDNEM 299
DMQKQLRQLQEKFYQ+YDSTDSENDEDG+LSEDSMRS+ +D RA DSV RSDNEM
Sbjct: 778 LQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSDGMDNRAHDSVPDRSDNEM 957
Query: 300 CELDPGQFIDRARALIREQEMAE-NKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNT 358
+LDPG F+DRARALIREQ M E +KPKR+GS + + GP S+ EGK LAETLKQELNT
Sbjct: 958 SDLDPGHFLDRARALIREQSMMEGDKPKRDGS-RGKSQGPTSMHAEGKQLAETLKQELNT 1134
Query: 359 AMSQVVDTVVKVFSAKPSRQVPQVFPPLQIPQA-RFAVNGENHNFHTANQRLQCFGDVII 417
AMSQVVDTVVKVF AKP R VPQVFPPL + RFAVNGEN NFHTANQRLQCFGDVII
Sbjct: 1135AMSQVVDTVVKVF-AKPPRPVPQVFPPLHMESPDRFAVNGENPNFHTANQRLQCFGDVII 1311
Query: 418 PNPLDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQ--PLHQSPLSATAGF 475
PNPLDTFGS+Q+P+S DQTEALPLVVRKNSS+Q+ S GGHH LH PLS+T GF
Sbjct: 1312PNPLDTFGSMQVPNSNDQTEALPLVVRKNSSDQTGSLSTPGGHHHHPSLHPPPLSSTMGF 1491
Query: 476 TTPSFRHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXX 535
+ PSFRHPFPLPLM YPFQSPLGAP+G + GKDR+SPE KM
Sbjct: 1492SPPSFRHPFPLPLMGYPFQSPLGAPTGPYPGKDRSSPESLDLSRETTSLRTKMSSNHLSH 1671
Query: 536 XXXXXXXXXXTAEGLSLSLIKSECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYT 595
EGLSLSLIKSECGDLQDMSDISPYSGS +QEGLSPNHLKKAKLMFFYT
Sbjct: 1672HRSISPTHPGN-EGLSLSLIKSECGDLQDMSDISPYSGSTIQEGLSPNHLKKAKLMFFYT 1848
Query: 596 RYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSI 655
RYPSSNMLK +FSDVKFNRCITSQLIKWFSNFREFYYIQMEK+ARQAINDGVT +EELS+
Sbjct: 1849RYPSSNMLKMFFSDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQAINDGVTGSEELSV 2028
Query: 656 TRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVIC 715
+RDCEL+RALNMHYNKANDFEVPERFLEVAQITLREFFNAI+AGKDVDPSWKKAIYKVIC
Sbjct: 2029SRDCELFRALNMHYNKANDFEVPERFLEVAQITLREFFNAIVAGKDVDPSWKKAIYKVIC 2208
Query: 716 KLDSEVPEIFKSPNCLQELLHE 737
KLDSEVPEIFKSPNCLQELLHE
Sbjct: 2209KLDSEVPEIFKSPNCLQELLHE 2274
>gb|AF063018.1|AF063018 Danio rerio homeodomain protein (Prox1) mRNA, complete cds
Length = 2500
Score = 1085 bits (2807), Expect = 0.0
Identities = 560/742 (75%), Positives = 607/742 (81%), Gaps = 5/742 (0%)
Frame = +3
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDST+LLSRQTKRRRVDIGVKRTVG AS F +A+ATF SAMNP GSEQDVE SVVQ
Sbjct: 69 MPDHDSTSLLSRQTKRRRVDIGVKRTVGQASVVFTRAKATFLSAMNPHGSEQDVECSVVQ 248
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDA+MPFPGATIISQLLKNN+ KNGG+EP+FQ SGLSSTG
Sbjct: 249 HADGEKSNVLRKLLKRANSYEDAVMPFPGATIISQLLKNNLTKNGGSEPNFQGSGLSSTG 428
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SE+ QED CSNSSR SP ECLSPF RP+M+QF+++RL DEHLRAKRARVENIIRGMSHSP
Sbjct: 429 SEMQQEDACSNSSRGSPQECLSPFSRPSMTQFEMERLTDEHLRAKRARVENIIRGMSHSP 608
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
SV LR +N+RE A Q SPRE+YREN LVSA
Sbjct: 609 SVTLRAGDNDREGAAQPPSPRENYRENKRKQKLPQQQQQSFQQLVSARKEQKHEERRQLK 788
Query: 241 XXXXDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSV-GRSDNEM 299
DMQKQLRQLQEKFYQ+YDSTDSENDEDG+LSEDSMRS+ +D RA DSV RSDNEM
Sbjct: 789 LQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSDGMDNRAHDSVPDRSDNEM 968
Query: 300 CELDPGQFIDRARALIREQEMAE-NKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNT 358
+LDPG F+DRARALIREQ M E +KPKR+GS + + GP S+ EGK +AETLKQELNT
Sbjct: 969 SDLDPGHFLDRARALIREQSMMEGDKPKRDGS-RGKSQGPTSMHAEGKQMAETLKQELNT 1145
Query: 359 AMSQVVDTVVKVFSAKPSRQVPQVFPPLQIPQA-RFAVNGENHNFHTANQRLQCFGDVII 417
AMSQVVDTVVKVF AKP R VPQVFPPL + RFAVNGEN NFHTANQRLQCFGDVII
Sbjct: 1146AMSQVVDTVVKVF-AKPPRPVPQVFPPLHMESPDRFAVNGENPNFHTANQRLQCFGDVII 1322
Query: 418 PNPLDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQ--PLHQSPLSATAGF 475
PNPLDTF S+Q+P+S DQTEALPLVVRKNSS+Q+ S GGHH LH PLS+T GF
Sbjct: 1323PNPLDTFASMQVPNSNDQTEALPLVVRKNSSDQTGSLSTPGGHHHHPSLHPPPLSSTMGF 1502
Query: 476 TTPSFRHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXX 535
+ PSFRHPFPLPLM YPFQSPLGAP+G + GKDR+SPE KM
Sbjct: 1503SPPSFRHPFPLPLMGYPFQSPLGAPTGPYPGKDRSSPESLDLSRETTSLRTKMSSNHLSH 1682
Query: 536 XXXXXXXXXXTAEGLSLSLIKSECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYT 595
EGLSLSLIKSECGDLQDMSDISPYSGS +QEGLSPNHLKKAKLMFFYT
Sbjct: 1683HRSISPTHPGN-EGLSLSLIKSECGDLQDMSDISPYSGSTIQEGLSPNHLKKAKLMFFYT 1859
Query: 596 RYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSI 655
RYPSSNMLK +FSDVKFNRCITSQLIKWFSNFREFYYIQMEK+ARQAINDGVT +EELS+
Sbjct: 1860RYPSSNMLKMFFSDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQAINDGVTGSEELSV 2039
Query: 656 TRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVIC 715
+RDCEL+RALNMHYNKANDFEVPERFLEVAQITLREFFNAI+AGKDVDPSWKKAIYKVIC
Sbjct: 2040SRDCELFRALNMHYNKANDFEVPERFLEVAQITLREFFNAIVAGKDVDPSWKKAIYKVIC 2219
Query: 716 KLDSEVPEIFKSPNCLQELLHE 737
KLDSEVPEIFKSPNCLQELLHE
Sbjct: 2220KLDSEVPEIFKSPNCLQELLHE 2285
>dbj|AB008774.1|AB008774 Cynops pyrrhogaster mRNA, partial cds
Length = 2060
Score = 1078 bits (2787), Expect = 0.0
Identities = 551/690 (79%), Positives = 587/690 (84%), Gaps = 1/690 (0%)
Frame = +1
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHD T LLSRQTKRRRVDIGVKRTVGTASA FA +RA+FF+A N QGSEQDVEYSVVQ
Sbjct: 1 MPDHDCTGLLSRQTKRRRVDIGVKRTVGTASAIFANSRASFFNATNSQGSEQDVEYSVVQ 180
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGG EPSFQASGLSSTG
Sbjct: 181 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGNEPSFQASGLSSTG 360
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SE+HQED+CSNSSRDSP ECLSPFGRP MSQFD++RLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 361 SEIHQEDMCSNSSRDSPQECLSPFGRPPMSQFDMERLCDEHLRAKRARVENIIRGMSHSP 540
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
+V++RGNENERE APQS+SPRESYREN LVSA
Sbjct: 541 NVSMRGNENEREGAPQSISPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 720
Query: 241 XXXXDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQLRQLQEKFYQ+YDSTDSEN DG+LSEDSM SEI+D RA+DSVGRSD+EM
Sbjct: 721 QQLEDMQKQLRQLQEKFYQIYDSTDSEN--DGNLSEDSMHSEIMDGRAEDSVGRSDHEMF 894
Query: 301 ELDPGQFIDRARALIREQEM-AENKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNTA 359
+LDPGQFIDRARALIREQE+ AENKPKREG ++E+DHG NS PEGKHLAETLKQELNTA
Sbjct: 895 DLDPGQFIDRARALIREQEIAAENKPKREG-HREKDHGHNSCHPEGKHLAETLKQELNTA 1071
Query: 360 MSQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPN 419
MSQVVDTVVKVFS+KPSRQ+PQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPN
Sbjct: 1072MSQVVDTVVKVFSSKPSRQLPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPN 1251
Query: 420 PLDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPS 479
PL+TF ++Q+P+S DQTEALPLVVRKNSSE SASGP G HH LHQSPLSA A F + S
Sbjct: 1252PLNTFSNMQLPNSADQTEALPLVVRKNSSEHSASGPPPGSHHPSLHQSPLSAAASFASSS 1431
Query: 480 FRHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXX 539
FRHPFPLPLMAYPFQ+ L +P SFS KDRASPE KM
Sbjct: 1432FRHPFPLPLMAYPFQT-LWSPFWSFSAKDRASPESLDLTRETASLRTKMSSHHLNHHPCS 1608
Query: 540 XXXXXXTAEGLSLSLIKSECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPS 599
T EGLSLSLIKSECGD+QDM++ISPYSG+AMQEGLSPNHLKKAKLMFFYTRYPS
Sbjct: 1609PAHPGSTNEGLSLSLIKSECGDMQDMAEISPYSGNAMQEGLSPNHLKKAKLMFFYTRYPS 1788
Query: 600 SNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDC 659
SNM KTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGV ST+ELSITRDC
Sbjct: 1789SNMPKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVVSTDELSITRDC 1968
Query: 660 ELYRALNMHYNKANDFEVPERFLEVAQITL 689
ELYRALNMHYNKANDFEVPERFLEVAQITL
Sbjct: 1969ELYRALNMHYNKANDFEVPERFLEVAQITL 2058
>emb|AL606537.10|AL606537 Human DNA sequence from clone RP11-53A1 on chromosome 1, complete
sequence [Homo sapiens]
Length = 116821
Score = 981 bits (2537), Expect = 0.0
Identities = 500/576 (86%), Positives = 509/576 (87%)
Frame = +3
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 57804 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 57983
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 57984 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 58163
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFD+DRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 58164 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 58343
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
SVALRGNENEREMAPQSVSPRESYREN LVSA
Sbjct: 58344 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 58523
Query: 241 XXXXDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQLRQLQEKFYQ+YDSTDSENDEDG+LSEDSMRSEILDARAQDSVGRSDNEMC
Sbjct: 58524 QQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 58703
Query: 301 ELDPGQFIDRARALIREQEMAENKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNTAM 360
ELDPGQFIDRARALIREQEMAENKPKREG+NKERDHGPNSLQPEGKHLAETLKQELNTAM
Sbjct: 58704 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 58883
Query: 361 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 420
SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 58884 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 59063
Query: 421 LDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSF 480
LDTFG+VQM SSTDQTEALPLVVRKNSS+QSASGPA GGHHQPLHQSPLSAT GFTT +F
Sbjct: 59064 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASGPAAGGHHQPLHQSPLSATTGFTTSTF 59243
Query: 481 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXXX 540
RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPE KM
Sbjct: 59244 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 59423
Query: 541 XXXXXTAEGLSLSLIKSECGDLQDMSDISPYSGSAM 576
TAEGLSLSLIKSECGDLQDMS+ISPYSGSA+
Sbjct: 59424 AHPPSTAEGLSLSLIKSECGDLQDMSEISPYSGSAI 59531
Score = 140 bits (354), Expect = 4e-31
Identities = 66/67 (98%), Positives = 67/67 (99%)
Frame = +2
Query: 611 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 670
+FNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN
Sbjct: 72785 QFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 72964
Query: 671 KANDFEV 677
KANDFEV
Sbjct: 72965 KANDFEV 72985
Score = 127 bits (320), Expect = 3e-27
Identities = 61/62 (98%), Positives = 62/62 (99%)
Frame = +3
Query: 676 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQELL 735
+VPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQELL
Sbjct: 96912 QVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQELL 97091
Query: 736 HE 737
HE
Sbjct: 97092 HE 97097
Score = 78.6 bits (192), Expect = 2e-12
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = +1
Query: 574 SAMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK 611
S MQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK
Sbjct: 66427 SYMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK 66540
>gb|AC011700.5|AC011700 Homo sapiens Chromosome 1 BAC RP11-478J18 (Roswell Park Cancer
Institute Human BAC Library) complete sequence
Length = 154732
Score = 981 bits (2537), Expect = 0.0
Identities = 500/576 (86%), Positives = 509/576 (87%)
Frame = -2
Query: 1 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 60
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ
Sbjct: 25185 MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQ 25006
Query: 61 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 120
HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG
Sbjct: 25005 HADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTG 24826
Query: 121 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSP 180
SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFD+DRLCDEHLRAKRARVENIIRGMSHSP
Sbjct: 24825 SEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSP 24646
Query: 181 SVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXXXXX 240
SVALRGNENEREMAPQSVSPRESYREN LVSA
Sbjct: 24645 SVALRGNENEREMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLK 24466
Query: 241 XXXXDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMC 300
DMQKQLRQLQEKFYQ+YDSTDSENDEDG+LSEDSMRSEILDARAQDSVGRSDNEMC
Sbjct: 24465 QQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMC 24286
Query: 301 ELDPGQFIDRARALIREQEMAENKPKREGSNKERDHGPNSLQPEGKHLAETLKQELNTAM 360
ELDPGQFIDRARALIREQEMAENKPKREG+NKERDHGPNSLQPEGKHLAETLKQELNTAM
Sbjct: 24285 ELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAM 24106
Query: 361 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 420
SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP
Sbjct: 24105 SQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNP 23926
Query: 421 LDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSF 480
LDTFG+VQM SSTDQTEALPLVVRKNSS+QSASGPA GGHHQPLHQSPLSAT GFTT +F
Sbjct: 23925 LDTFGNVQMASSTDQTEALPLVVRKNSSDQSASGPAAGGHHQPLHQSPLSATTGFTTSTF 23746
Query: 481 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPEXXXXXXXXXXXXXKMXXXXXXXXXXXX 540
RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPE KM
Sbjct: 23745 RHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRDTTSLRTKMSSHHLSHHPCSP 23566
Query: 541 XXXXXTAEGLSLSLIKSECGDLQDMSDISPYSGSAM 576
TAEGLSLSLIKSECGDLQDMS+ISPYSGSA+
Sbjct: 23565 AHPPSTAEGLSLSLIKSECGDLQDMSEISPYSGSAI 23458
Score = 140 bits (354), Expect = 4e-31
Identities = 66/67 (98%), Positives = 67/67 (99%)
Frame = -2
Query: 611 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 670
+FNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN
Sbjct: 10203 QFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 10024
Query: 671 KANDFEV 677
KANDFEV
Sbjct: 10023 KANDFEV 10003
Score = 78.6 bits (192), Expect = 2e-12
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = -3
Query: 574 SAMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK 611
S MQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK
Sbjct: 16562 SYMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK 16449
>gb|AF070733.1|AF070733 Notophthalmus viridescens transcription factor Prox1 (Prox1) gene,
partial cds
Length = 1064
Score = 551 bits (1419), Expect = e-154
Identities = 285/357 (79%), Positives = 306/357 (84%), Gaps = 1/357 (0%)
Frame = +1
Query: 41 FFSAMNPQGSEQDVEYSVVQHADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNN 100
FF+AMN QGSEQDVEYSVVQHADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNN
Sbjct: 1 FFNAMNSQGSEQDVEYSVVQHADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNN 180
Query: 101 MNKNGGTEPSFQASGLSSTGSEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDVDRLCDE 160
MNKNGG EPSFQASGLSSTGSE+HQED+CSNSSRDSP ECLSPFGRP MSQFD++RLCDE
Sbjct: 181 MNKNGGNEPSFQASGLSSTGSEIHQEDMCSNSSRDSPQECLSPFGRPPMSQFDMERLCDE 360
Query: 161 HLRAKRARVENIIRGMSHSPSVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXX 220
HLRAKRARVENIIRGMSHSP+V++RGNENERE APQS+SPRESYREN
Sbjct: 361 HLRAKRARVENIIRGMSHSPNVSMRGNENEREGAPQSISPRESYRENKRKQKLPQQQQQS 540
Query: 221 XXXLVSAXXXXXXXXXXXXXXXXXDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMR 280
LVSA DMQKQLRQLQEKFYQ+YDSTDSEN DG+LSEDSM
Sbjct: 541 FQQLVSARKEQKREERRQLKQQLEDMQKQLRQLQEKFYQIYDSTDSEN--DGNLSEDSMH 714
Query: 281 SEILDARAQDSVGRSDNEMCELDPGQFIDRARALIREQEM-AENKPKREGSNKERDHGPN 339
SEI+D RA DSVGRSD+E+ +LDPGQFIDRARALIREQE+ AENKPKREG ++E+DHG N
Sbjct: 715 SEIMDGRAADSVGRSDHELFDLDPGQFIDRARALIREQEIAAENKPKREG-HREKDHGHN 891
Query: 340 SLQPEGKHLAETLKQELNTAMSQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVN 396
S PEGKHLAETLKQELNTAMSQVVDTVVKVFS+KPSR +PQ FPPLQIPQARFAVN
Sbjct: 892 SCHPEGKHLAETLKQELNTAMSQVVDTVVKVFSSKPSRHLPQDFPPLQIPQARFAVN 1062
>gb|AF069290.1|AF069290 Xenopus laevis Prox1 mRNA, partial cds
Length = 394
Score = 262 bits (669), Expect = 1e-67
Identities = 125/131 (95%), Positives = 128/131 (97%)
Frame = +1
Query: 582 PNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQ 641
PNH KKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQME+YARQ
Sbjct: 1 PNHFKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMERYARQ 180
Query: 642 AINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKD 701
AINDG+TSTEEL ITRDCELYRALNMHYNKAN+FEVPERFLEVAQITLRE FNAIIAGKD
Sbjct: 181 AINDGITSTEELCITRDCELYRALNMHYNKANNFEVPERFLEVAQITLRESFNAIIAGKD 360
Query: 702 VDPSWKKAIYK 712
VDPSWKKAIYK
Sbjct: 361 VDPSWKKAIYK 393
>ref|XM_063420.1| Homo sapiens similar to HOMEOBOX PROSPERO-LIKE PROTEIN PROX1 (PROX
1) (LOC122959), mRNA
Length = 429
Score = 220 bits (561), Expect = 4e-55
Identities = 101/137 (73%), Positives = 121/137 (87%)
Frame = +1
Query: 591 MFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTST 650
MFF+TRYPSSN+LK YF DV+FNRCITSQ+IKWFSNFREFYYIQMEK ARQAI+DGVT+
Sbjct: 1 MFFFTRYPSSNLLKVYFPDVQFNRCITSQMIKWFSNFREFYYIQMEKSARQAISDGVTNP 180
Query: 651 EELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAI 710
+ L + R+ EL++ALNMHYNK NDFEVP+ FLE+A +TL+EFF A+ AG+D DPSWKK I
Sbjct: 181 KMLVVLRNSELFQALNMHYNKGNDFEVPDCFLEIASLTLQEFFRAVSAGRDSDPSWKKPI 360
Query: 711 YKVICKLDSEVPEIFKS 727
YK+I KLDS++PEIFKS
Sbjct: 361 YKIISKLDSDIPEIFKS 411
>gb|AY060680.1| Drosophila melanogaster GH11848 full length cDNA
Length = 3441
Score = 212 bits (539), Expect = 1e-52
Identities = 103/180 (57%), Positives = 132/180 (73%), Gaps = 1/180 (0%)
Frame = +3
Query: 556 KSECGDLQDMSD-ISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNR 614
+SEC D ++P S + L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+
Sbjct: 1800 QSECNSADMQFDGMAPTSST-----LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNK 1964
Query: 615 CITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYNKAND 674
T+QL+KWFSNFREFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN+ N
Sbjct: 1965 NNTAQLVKWFSNFREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNH 2144
Query: 675 FEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 734
EVP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 2145 IEVPQNFRFVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 2324
>ref|NM_079593.1| Drosophila melanogaster prospero (pros), mRNA
Length = 5635
Score = 211 bits (536), Expect = 3e-52
Identities = 97/155 (62%), Positives = 122/155 (78%)
Frame = +1
Query: 580 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYA 639
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFREFYYIQMEKYA
Sbjct: 4054 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFREFYYIQMEKYA 4233
Query: 640 RQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAG 699
RQA+ +G+ + ++L I D ELYR LN+HYN+ N EVP+ F V + TLREFF AI G
Sbjct: 4234 RQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEVPQNFRFVVESTLREFFRAIQGG 4413
Query: 700 KDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 734
KD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 4414 KDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 4518
>emb|Z11743.1|DMPROSPER D. melanogaster prospero gene encoding divergent homeodomain protein
Length = 6017
Score = 211 bits (536), Expect = 3e-52
Identities = 97/155 (62%), Positives = 122/155 (78%)
Frame = +1
Query: 580 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYA 639
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFREFYYIQMEKYA
Sbjct: 4042 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFREFYYIQMEKYA 4221
Query: 640 RQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAG 699
RQA+ +G+ + ++L I D ELYR LN+HYN+ N EVP+ F V + TLREFF AI G
Sbjct: 4222 RQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEVPQNFRFVVESTLREFFRAIQGG 4401
Query: 700 KDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 734
KD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 4402 KDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 4506
>gb|M81389.1|DROPROS D.melanogaster Pros protein (prospero) mRNA, complete cds
Length = 6422
Score = 211 bits (536), Expect = 3e-52
Identities = 97/155 (62%), Positives = 122/155 (78%)
Frame = +2
Query: 580 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYA 639
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFREFYYIQMEKYA
Sbjct: 4841 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFREFYYIQMEKYA 5020
Query: 640 RQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAG 699
RQA+ +G+ + ++L I D ELYR LN+HYN+ N EVP+ F V + TLREFF AI G
Sbjct: 5021 RQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEVPQNFRFVVESTLREFFRAIQGG 5200
Query: 700 KDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 734
KD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 5201 KDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 5305
>ref|XM_081366.1| prospero, mRNA
Length = 6820
Score = 211 bits (536), Expect = 3e-52
Identities = 97/155 (62%), Positives = 122/155 (78%)
Frame = +1
Query: 580 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYA 639
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFREFYYIQMEKYA
Sbjct: 4843 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFREFYYIQMEKYA 5022
Query: 640 RQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAG 699
RQA+ +G+ + ++L I D ELYR LN+HYN+ N EVP+ F V + TLREFF AI G
Sbjct: 5023 RQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEVPQNFRFVVESTLREFFRAIQGG 5202
Query: 700 KDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 734
KD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 5203 KDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 5307
>dbj|D10609.1|DROPROSA Drosophila melanogaster mRNA for prospero, complete cds
Length = 5607
Score = 211 bits (536), Expect = 3e-52
Identities = 97/155 (62%), Positives = 122/155 (78%)
Frame = +3
Query: 580 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYA 639
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFREFYYIQMEKYA
Sbjct: 4044 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFREFYYIQMEKYA 4223
Query: 640 RQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAG 699
RQA+ +G+ + ++L I D ELYR LN+HYN+ N EVP+ F V + TLREFF AI G
Sbjct: 4224 RQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEVPQNFRFVVESTLREFFRAIQGG 4403
Query: 700 KDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 734
KD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 4404 KDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 4508
>ref|NM_066359.1| Caenorhabditis elegans
Length = 1761
Score = 210 bits (534), Expect = 5e-52
Identities = 96/178 (53%), Positives = 130/178 (72%)
Frame = +1
Query: 557 SECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCI 616
SECG Y G L+P HL+KAKLMFFYTRYP+SN+LK+YF D++FN+
Sbjct: 1249 SECG----------YEGGGSSSMLTPMHLRKAKLMFFYTRYPNSNLLKSYFPDIRFNKNN 1398
Query: 617 TSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYNKANDFE 676
T+QL+KWFSNFREFYY QMEK+ARQA+ +G+T ++ +++D EL++ LN HYN+ N +
Sbjct: 1399 TAQLVKWFSNFREFYYNQMEKFARQALAEGITDRNDIFVSKDSELFKVLNTHYNRNNHIK 1578
Query: 677 VPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 734
P+R + V Q TLREF +AI GKD++PSWKK IYKVI +L+ ++P+ FK PN L+ L
Sbjct: 1579 APDRLVFVVQETLREFHDAIKQGKDIEPSWKKTIYKVINRLEDQIPDFFKEPNFLERL 1752
>gb|AC006530.4|AC006530 Homo sapiens chromosome 14 clone BAC 316E14 map 14q24.3, complete
sequence
Length = 203010
Score = 114 bits (286), Expect = 3e-23
Identities = 56/91 (61%), Positives = 70/91 (76%)
Frame = -2
Query: 587 KAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDG 646
K ++ T + S+ + F V+FNRCITSQ+IKWFSNFREFYYIQMEK ARQAI+DG
Sbjct: 7466 KQTVLILSTSWQMSDWMDLLF--VQFNRCITSQMIKWFSNFREFYYIQMEKSARQAISDG 7293
Query: 647 VTSTEELSITRDCELYRALNMHYNKANDFEV 677
VT+ + L + R+ EL++ALNMHYNK NDFEV
Sbjct: 7292 VTNPKMLVVLRNSELFQALNMHYNKGNDFEV 7200
Score = 81.6 bits (200), Expect = 3e-13
Identities = 35/54 (64%), Positives = 46/54 (84%)
Frame = -3
Query: 674 DFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKS 727
+ +VP+ FLE+A +TL+EFF A+ AG+D DPSWKK IYK+I KLDS++PEIFKS
Sbjct: 5713 EMQVPDCFLEIASLTLQEFFRAVSAGRDSDPSWKKPIYKIISKLDSDIPEIFKS 5552
Score = 64.7 bits (156), Expect = 3e-08
Identities = 28/36 (77%), Positives = 33/36 (90%)
Frame = -1
Query: 576 MQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK 611
+QEGL+P HLKKAKLMFF+TRYPSSN+LK YF DV+
Sbjct: 8916 IQEGLNPGHLKKAKLMFFFTRYPSSNLLKVYFPDVQ 8809
Score = 53.1 bits (126), Expect = 1e-04
Identities = 65/266 (24%), Positives = 97/266 (36%), Gaps = 7/266 (2%)
Frame = -3
Query: 124 HQEDICSNSSRDSPPECL---SPFGR---PTMSQFDVDRLCDEHLRAKRARVENIIRGMS 177
H + C+ R S P L SPF P+ S D + DEH++AKRARVE I+RGM
Sbjct: 14188 HLAEACTEGERSSSPPELDRDSPFPWSQVPSSSPTDPEWFGDEHIQAKRARVETIVRGMC 14009
Query: 178 HSPSVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXX 237
SP+ + GN A VSPR + A
Sbjct: 14008 LSPNPLVPGN------AQAGVSPRCPKKARERKRKQNLPTPQGLLMPAPAWDQGNRKGGP 13847
Query: 238 XXXXXXXDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDN 297
+++QLR LQE Q D+ A+ G
Sbjct: 13846 RVREQLHLLKQQLRHLQEHILQAAKPRDT-------------------AQGPGGCGTGKG 13724
Query: 298 EMCELDPGQFIDRARALIREQEMAENKPKREGSNKERDHGPNSLQPEGKHLA-ETLKQEL 356
+ R + + + +K G+ K ++ S P G + E L++EL
Sbjct: 13723 PLSAKQGNGCGPRPWVVDGDHQQGTSK-DLSGAEKHQESEKPSFLPSGAPASLEILRKEL 13547
Query: 357 NTAMSQVVDTVVKVFSAKPSRQVPQV 382
A+SQ VD+V++ P + Q+
Sbjct: 13546 TRAVSQAVDSVLQKVLLDPPGHLTQL 13469
>gb|U40760.1|FRU40760 Fugu rubripes prospero_like protein gene, partial cds
Length = 2162
Score = 105 bits (261), Expect = 2e-20
Identities = 50/82 (60%), Positives = 60/82 (72%), Gaps = 5/82 (6%)
Frame = +2
Query: 606 YFSDV-----KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCE 660
YF+D+ + RC+TSQLIKWFSNFREFYYIQMEK ARQA+ GVT L++ R+
Sbjct: 794 YFTDLFLVRPQLTRCVTSQLIKWFSNFREFYYIQMEKSARQAVAQGVTDVRSLAVERESG 973
Query: 661 LYRALNMHYNKANDFEVPERFL 682
L+RALN HYNKANDF+V L
Sbjct: 974 LFRALNTHYNKANDFQVTRALL 1039
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/39 (76%), Positives = 35/39 (88%)
Frame = +3
Query: 676 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVI 714
+VP+RFLEVA ITLREF++AI G+D DPSWKKAIYKVI
Sbjct: 2046 QVPQRFLEVAAITLREFYSAISTGEDRDPSWKKAIYKVI 2162
Score = 57.0 bits (136), Expect = 7e-06
Identities = 26/34 (76%), Positives = 29/34 (84%)
Frame = +1
Query: 578 EGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVK 611
EGL+ NHLKKAKLMFFYTRYPSS +LK F DV+
Sbjct: 553 EGLTTNHLKKAKLMFFYTRYPSSQVLKACFHDVQ 654
>gb|L14331.1| Caenorhabditis elegans cosmid K12H4, complete sequence
Length = 38582
Score = 88.2 bits (217), Expect = 3e-15
Identities = 41/72 (56%), Positives = 51/72 (69%)
Frame = +3
Query: 557 SECGDLQDMSDISPYSGSAMQEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCI 616
SECG Y G L+P HL+KAKLMFFYTRYP+SN+LK+YF D++FN+
Sbjct: 27816 SECG----------YEGGGSSSMLTPMHLRKAKLMFFYTRYPNSNLLKSYFPDIRFNKNN 27965
Query: 617 TSQLIKWFSNFR 628
T+QL+KWFSNFR
Sbjct: 27966 TAQLVKWFSNFR 28001
Score = 66.2 bits (160), Expect = 1e-08
Identities = 30/59 (50%), Positives = 44/59 (73%)
Frame = +2
Query: 627 FREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVPERFLEVA 685
FREFYY QMEK+ARQA+ +G+T ++ +++D EL++ LN HYN+ N +V RFL V+
Sbjct: 28412 FREFYYNQMEKFARQALAEGITDRNDIFVSKDSELFKVLNTHYNRNNHIKV--RFLFVS 28582
Score = 52.4 bits (124), Expect = 2e-04
Identities = 23/40 (57%), Positives = 30/40 (74%)
Frame = +3
Query: 674 DFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKV 713
+ + P+R + V Q TLREF +AI GKD++PSWKK IYKV
Sbjct: 28599 NLQAPDRLVFVVQETLREFHDAIKQGKDIEPSWKKTIYKV 28718
>gb|AF190405.1|AF190405 Drosophila virilis homeodomain transcription factor Prospero (pros)
gene, complete cds
Length = 11422
Score = 77.8 bits (190), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +1
Query: 580 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFR 628
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFR
Sbjct: 5698 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFR 5844
Score = 75.1 bits (183), Expect = 2e-11
Identities = 34/59 (57%), Positives = 44/59 (73%)
Frame = +2
Query: 676 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 734
+VP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 11240 QVPQNFRFVVEQTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 11416
Score = 71.6 bits (174), Expect = 3e-10
Identities = 31/54 (57%), Positives = 40/54 (73%)
Frame = +1
Query: 624 FSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEV 677
+ REFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN+ N EV
Sbjct: 10666 YQRCREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEV 10827
>gb|AE003691.2|AE003691 Drosophila melanogaster genomic scaffold 142000013386035 section 16 of
105, complete sequence
Length = 226773
Score = 77.8 bits (190), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +2
Query: 580 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFR 628
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFR
Sbjct: 81302 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFR 81448
Score = 75.5 bits (184), Expect = 2e-11
Identities = 34/59 (57%), Positives = 44/59 (73%)
Frame = +1
Query: 676 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 734
+VP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 95332 QVPQNFRFVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 95508
Score = 74.7 bits (182), Expect = 3e-11
Identities = 36/67 (53%), Positives = 45/67 (66%)
Frame = +3
Query: 611 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 670
K NR +T I REFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN
Sbjct: 94893 KPNRILTKPNIPHLRICREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYN 95072
Query: 671 KANDFEV 677
+ N EV
Sbjct: 95073 RNNHIEV 95093
>gb|AC007710.11|AC007710 Drosophila melanogaster, chromosome 3R, region 86E-86E, BAC clone
BACR05C15, complete sequence
Length = 174426
Score = 77.8 bits (190), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +3
Query: 580 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFR 628
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFR
Sbjct: 101247 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFR 101393
Score = 75.5 bits (184), Expect = 2e-11
Identities = 34/59 (57%), Positives = 44/59 (73%)
Frame = +2
Query: 676 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 734
+VP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 115118 QVPQNFRFVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 115294
Score = 74.7 bits (182), Expect = 3e-11
Identities = 36/67 (53%), Positives = 45/67 (66%)
Frame = +1
Query: 611 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 670
K NR +T I REFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN
Sbjct: 114679 KPNRILTKPNIPHLRICREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYN 114858
Query: 671 KANDFEV 677
+ N EV
Sbjct: 114859 RNNHIEV 114879
>gb|AC008358.4|AC008358 Drosophila melanogaster, chromosome 3R, region 86E-86E, BAC clone
BACR48B07, complete sequence
Length = 170307
Score = 77.8 bits (190), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +3
Query: 580 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFR 628
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFR
Sbjct: 150726 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFR 150872
Score = 75.5 bits (184), Expect = 2e-11
Identities = 34/59 (57%), Positives = 44/59 (73%)
Frame = +2
Query: 676 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 734
+VP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 164597 QVPQNFRFVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 164773
Score = 74.7 bits (182), Expect = 3e-11
Identities = 36/67 (53%), Positives = 45/67 (66%)
Frame = +1
Query: 611 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 670
K NR +T I REFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN
Sbjct: 164158 KPNRILTKPNIPHLRICREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYN 164337
Query: 671 KANDFEV 677
+ N EV
Sbjct: 164338 RNNHIEV 164358
>gb|AF190403.1|AF190403 Drosophila melanogaster homeodomain transcription factor Prospero
(pros) gene, complete cds
Length = 9907
Score = 77.8 bits (190), Expect = 4e-12
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +1
Query: 580 LSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFR 628
L+P HL+KAKLMFF+ RYPSS +LK YF D+KFN+ T+QL+KWFSNFR
Sbjct: 4960 LTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNTAQLVKWFSNFR 5106
Score = 75.5 bits (184), Expect = 2e-11
Identities = 34/59 (57%), Positives = 44/59 (73%)
Frame = +3
Query: 676 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 734
+VP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 9714 QVPQNFRFVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 9890
Score = 74.7 bits (182), Expect = 3e-11
Identities = 36/67 (53%), Positives = 45/67 (66%)
Frame = +2
Query: 611 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 670
K NR +T I REFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN
Sbjct: 9281 KPNRILTKPNIPHLRICREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYN 9460
Query: 671 KANDFEV 677
+ N EV
Sbjct: 9461 RNNHIEV 9481
>gb|AC007709.4|AC007709 Drosophila melanogaster, chromosome 3R, region 86E-86E, BAC clone
BACR13P08, complete sequence
Length = 169707
Score = 75.5 bits (184), Expect = 2e-11
Identities = 34/59 (57%), Positives = 44/59 (73%)
Frame = +3
Query: 676 EVPERFLEVAQITLREFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 734
+VP+ F V + TLREFF AI GKD + SWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 11442 QVPQNFRFVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 11618
Score = 74.7 bits (182), Expect = 3e-11
Identities = 36/67 (53%), Positives = 45/67 (66%)
Frame = +2
Query: 611 KFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYN 670
K NR +T I REFYYIQMEKYARQA+ +G+ + ++L I D ELYR LN+HYN
Sbjct: 11003 KPNRILTKPNIPHLRICREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYN 11182
Query: 671 KANDFEV 677
+ N EV
Sbjct: 11183 RNNHIEV 11203
>ref|XM_063419.1| Homo sapiens similar to homeobox prospero-like protein (LOC122958),
mRNA
Length = 1326
Score = 53.1 bits (126), Expect = 1e-04
Identities = 65/266 (24%), Positives = 97/266 (36%), Gaps = 7/266 (2%)
Frame = +1
Query: 124 HQEDICSNSSRDSPPECL---SPFGR---PTMSQFDVDRLCDEHLRAKRARVENIIRGMS 177
H + C+ R S P L SPF P+ S D + DEH++AKRARVE I+RGM
Sbjct: 49 HLAEACTEGERSSSPPELDRDSPFPWSQVPSSSPTDPEWFGDEHIQAKRARVETIVRGMC 228
Query: 178 HSPSVALRGNENEREMAPQSVSPRESYRENXXXXXXXXXXXXXXXXLVSAXXXXXXXXXX 237
SP+ + GN A VSPR + A
Sbjct: 229 LSPNPLVPGN------AQAGVSPRCPKKARERKRKQNLPTPQGLLMPAPAWDQGNRKGGP 390
Query: 238 XXXXXXXDMQKQLRQLQEKFYQVYDSTDSENDEDGDLSEDSMRSEILDARAQDSVGRSDN 297
+++QLR LQE Q D+ A+ G
Sbjct: 391 RVREQLHLLKQQLRHLQEHILQAAKPRDT-------------------AQGPGGCGTGKG 513
Query: 298 EMCELDPGQFIDRARALIREQEMAENKPKREGSNKERDHGPNSLQPEGKHLA-ETLKQEL 356
+ R + + + +K G+ K ++ S P G + E L++EL
Sbjct: 514 PLSAKQGNGCGPRPWVVDGDHQQGTSK-DLSGAEKHQESEKPSFLPSGAPASLEILRKEL 690
Query: 357 NTAMSQVVDTVVKVFSAKPSRQVPQV 382
A+SQ VD+V++ P + Q+
Sbjct: 691 TRAVSQAVDSVLQKVLLDPPGHLTQL 768
>dbj|AK006828.1|AK006828 Mus musculus adult male testis cDNA, RIKEN full-length enriched
library, clone:1700058C01:homolog to SIMILARITY BY
BLASTN TO AF063018, full insert sequence
Length = 1616
Score = 47.0 bits (110), Expect = 0.007
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +2
Query: 147 PTMSQFDVDRLCDEHLRAKRARVENIIRGMSHSPSVALRGNENEREMAPQSVSPRE 202
P+ S + D DEH++AK+ARVE I+RGM SPS ++ G E P+ R+
Sbjct: 350 PSSSLTEADWFWDEHIQAKKARVETIVRGMCLSPSSSVSGRHKESLRCPEKGRERK 517
>gb|AY040548.1| Ateles belzebuth chamek prospero-related homeobox 1 (PROX1) gene,
partial cds
Length = 162
Score = 45.1 bits (105), Expect = 0.026
Identities = 21/22 (95%), Positives = 22/22 (99%)
Frame = +2
Query: 546 TAEGLSLSLIKSECGDLQDMSD 567
TAEGLSLSLIKSECGDLQDMS+
Sbjct: 95 TAEGLSLSLIKSECGDLQDMSE 160
>emb|AJ299062.1|CAR299062 Cicer arietinum partial mRNA for hypothetical protein (ORF1), clone
Can183
Length = 1041
Score = 41.2 bits (95), Expect = 0.38
Identities = 41/146 (28%), Positives = 57/146 (38%), Gaps = 18/146 (12%)
Frame = +2
Query: 255 EKFYQVYDSTD--SENDEDGDLSEDSMRSEILDARAQDSVGRSDNEMCELDPGQFID--- 309
+ F ++D TD ++DED D ++ + D A S G DN + E DP F
Sbjct: 62 DDFDDLHDGTDVDEDDDEDDDNEDEYENEDAFDVHAHASAGEHDNPIIEFDPELFSSDEA 241
Query: 310 RARAL--IREQEMAENKPKREGSN-----------KERDHGPNSLQPEGKHLAETLKQEL 356
ARAL E+EMA G N +HG NS + L E
Sbjct: 242 YARALQEAEEREMAARLLALAGINDLSFSITEETEDMEEHGANSQDAWEDVDPDELSYEE 421
Query: 357 NTAMSQVVDTVVKVFSAKPSRQVPQV 382
A+ +VV T + S +P V
Sbjct: 422 LLALGEVVGTESRGLSTDTIACLPSV 499
>gb|AC010974.8|AC010974 Homo sapiens clone RP11-159N20, complete sequence
Length = 147131
Score = 38.5 bits (88), Expect = 2.5
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Frame = +2
Query: 418 PNPLDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTT 477
P P T ++PS T +T +++ S+ +S PAT + + P + F
Sbjct: 16382 PAPSSTKSETRVPSETARTPFKSPLLKGISAPVISSNPATT---EVQRKKP---SVAFKK 16543
Query: 478 PSFRHPFPLPLMAYPFQSPLGAPSGSFS----GKDRASPE 513
P F HP P P + P APS SF+ G + SP+
Sbjct: 16544 PIFTHPMPSPEAVIQTRCPAHAPSSSFTVMALGPPKVSPK 16663
>ref|XM_092432.1| Homo sapiens similar to Nck-associated protein NAP5 (LOC165179), mRNA
Length = 4620
Score = 38.5 bits (88), Expect = 2.5
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Frame = +1
Query: 418 PNPLDTFGSVQMPSSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTT 477
P P T ++PS T +T +++ S+ +S PAT + + P + F
Sbjct: 2173 PAPSSTKSETRVPSETARTPFKSPLLKGISAPVISSNPATT---EVQRKKP---SVAFKK 2334
Query: 478 PSFRHPFPLPLMAYPFQSPLGAPSGSFS----GKDRASPE 513
P F HP P P + P APS SF+ G + SP+
Sbjct: 2335 PIFTHPMPSPEAVIQTRCPAHAPSSSFTVMALGPPKVSPK 2454
>gb|AF110377.1|AF110377 Homo sapiens PCAF-associated factor 400 (PAF400) mRNA, complete cds
Length = 12603
Score = 37.0 bits (84), Expect = 7.2
Identities = 25/76 (32%), Positives = 36/76 (46%)
Frame = -3
Query: 431 SSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSFRHPFPLPLMA 490
S+TDQ LPLV + + + PA G P H++PL A+A
Sbjct: 8428 SATDQPTYLPLVTGSKAPQGNPVSPAAAG*CSPAHKTPLFASA*SEDSD----------- 8282
Query: 491 YPFQSPLGAPSGSFSG 506
PFQ P GAP+ +++G
Sbjct: 8281 -PFQKP-GAPTSAWTG 8240
>ref|NM_003496.1| Homo sapiens transformation/transcription domain-associated protein
(TRRAP), mRNA
Length = 12563
Score = 37.0 bits (84), Expect = 7.2
Identities = 25/76 (32%), Positives = 36/76 (46%)
Frame = -3
Query: 431 SSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSFRHPFPLPLMA 490
S+TDQ LPLV + + + PA G P H++PL A+A
Sbjct: 8454 SATDQPTYLPLVTGSKAPQGNPVSPAAAG*CSPAHKTPLFASA*SEDSD----------- 8308
Query: 491 YPFQSPLGAPSGSFSG 506
PFQ P GAP+ +++G
Sbjct: 8307 -PFQKP-GAPTSAWTG 8266
>gb|AF076974.1|AF076974 Homo sapiens TRRAP protein (TRRAP) mRNA, complete cds
Length = 12563
Score = 37.0 bits (84), Expect = 7.2
Identities = 25/76 (32%), Positives = 36/76 (46%)
Frame = -3
Query: 431 SSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSFRHPFPLPLMA 490
S+TDQ LPLV + + + PA G P H++PL A+A
Sbjct: 8454 SATDQPTYLPLVTGSKAPQGNPVSPAAAG*CSPAHKTPLFASA*SEDSD----------- 8308
Query: 491 YPFQSPLGAPSGSFSG 506
PFQ P GAP+ +++G
Sbjct: 8307 -PFQKP-GAPTSAWTG 8266
>ref|XM_018373.2| Homo sapiens transformation/transcription domain-associated protein
(TRRAP), mRNA
Length = 12596
Score = 37.0 bits (84), Expect = 7.2
Identities = 25/76 (32%), Positives = 36/76 (46%)
Frame = -1
Query: 431 SSTDQTEALPLVVRKNSSEQSASGPATGGHHQPLHQSPLSATAGFTTPSFRHPFPLPLMA 490
S+TDQ LPLV + + + PA G P H++PL A+A
Sbjct: 8429 SATDQPTYLPLVTGSKAPQGNPVSPAAAG*CSPAHKTPLFASA*SEDSD----------- 8283
Query: 491 YPFQSPLGAPSGSFSG 506
PFQ P GAP+ +++G
Sbjct: 8282 -PFQKP-GAPTSAWTG 8241
>gb|AC005153.1|AC005153 Homo sapiens PAC clone RP4-537P9 from 7p11.2-p12, complete sequence
Length = 124191
Score = 36.6 bits (83), Expect = 9.4
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +2
Query: 463 PLHQSPLSATAGFTTPSFRHPFPLPLMAYPFQSPLGAPS 501
P H SPL AG PSF +PLPL A+ F + PS
Sbjct: 50075 PTHPSPLLQNAGAWDPSFGLQYPLPLGAHSFLRDMSTPS 50191
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 21, 2002 12:37 AM
Number of letters in database: 601,717,568
Number of sequences in database: 1,165,784
Lambda K H
0.315 0.130 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,406,061,178
Number of Sequences: 1165784
Number of extensions: 48653784
Number of successful extensions: 212874
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 47835
Number of HSP's successfully gapped in prelim test: 13062
Number of HSP's that attempted gapping in prelim test: 127948
Number of HSP's gapped (non-prelim): 130294
length of query: 737
length of database: 1,632,228,288
effective HSP length: 143
effective length of query: 594
effective length of database: 1,465,521,176
effective search space: 870519578544
effective search space used: 870519578544
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 83 (36.6 bits)