TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(607 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,166,659 sequences; 602,804,554 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_019724.1| Mus musculus matrix metalloproteinase 16 (... 1186 0.0
dbj|AB021228.1|AB021228 Mus musculus mRNA for membrane-type... 1186 0.0
dbj|D85509.1|D85509 Rattus rattus mRNA for MT3-MMP, complet... 1179 0.0
gb|AF282844.1|AF282844 Mus musculus matrix metalloproteinas... 1177 0.0
ref|NM_005941.2| Homo sapiens matrix metalloproteinase 16 (... 1171 0.0
dbj|D83646.1|HUMMETALL Homo sapiens mRNA for metalloprotein... 1171 0.0
dbj|D85511.1|D85511 Homo sapiens mRNA for MT3-MMP, complete... 1171 0.0
dbj|AB009303.1|AB009303 Homo sapiens mRNA for membrane-type... 1169 0.0
ref|NM_080776.1| Rattus norvegicus matrix metalloproteinase... 1058 0.0
dbj|D63886.1|D63886 Rattus sp. mRNA for MT3-MMP-del, comple... 1058 0.0
gb|U66463.1|GGU66463 Gallus gallus membrane type-matrix met... 1083 0.0
gb|AF244994.1|AF244994 Scyliorhinus torazame membrane type-... 914 0.0
dbj|AB021226.1|AB021226 Mus musculus mRNA for membrane-type... 787 0.0
ref|NM_031757.1| Rattus norvegicus matrix metalloproteinase... 786 0.0
dbj|AB023659.1|AB023659 Rattus norvegicus mt5-mmp mRNA for ... 786 0.0
ref|NM_006690.2| Homo sapiens matrix metalloproteinase 24 (... 786 0.0
dbj|AB021227.1|AB021227 Homo sapiens mRNA for membrane-type... 786 0.0
gb|AF131284.1|AF131284 Homo sapiens membrane type 5 matrix ... 786 0.0
ref|XM_047216.1| Homo sapiens matrix metalloproteinase 24 (... 786 0.0
ref|NM_010808.1| Mus musculus matrix metalloproteinase 24 (... 780 0.0
emb|AJ010262.1|MMU010262 Mus musculus mRNA for membrane-typ... 780 0.0
ref|NM_022564.1| Homo sapiens matrix metalloproteinase 16 (... 749 0.0
dbj|D83647.1|HUMMETALLA Homo sapiens mRNA for metalloprotei... 749 0.0
dbj|AB047651.1|AB047651 Oryzias latipes MT5-MMP mRNA for me... 745 0.0
dbj|AB010921.1|AB010921 Capra hircus MT1MMP mRNA for Membra... 659 0.0
ref|NM_031056.1| Rattus norvegicus matrix metalloproteinase... 658 0.0
emb|X91785.1|RNMTMMPGN R.norvegicus mRNA for membrane-type ... 658 0.0
ref|NM_004995.2| Homo sapiens matrix metalloproteinase 14 (... 657 0.0
gb|U41078.1|HSU41078 Human membrane-type matrix metalloprot... 657 0.0
emb|Z48481.1|HSMMPM1 H.sapiens mRNA for membrane-type matri... 657 0.0
emb|X83535.1|HSMTMMP29 Homo sapiens mRNA for membrane-type ... 657 0.0
dbj|D26512.1|HUMMTMMP Human mRNA for membrane type matrix m... 656 0.0
gb|AF290429.1|AF290429 Bos taurus membrane-type matrix meta... 655 0.0
emb|X90925.1|HSMTMMPPR H.sapiens mRNA for MT-MMP protein 655 0.0
gb|U54984.1|MMU54984 Mus musculus membrane-type matrix meta... 655 0.0
emb|X83537.1|RNMTMMP Rattus norvegicus mRNA for membrane-ty... 654 0.0
gb|AF067419.1|AF067419 Sus scrofa membrane-type 1 matrix me... 652 0.0
gb|AF306662.2|AF306662 Cricetulus griseus matrix metallopro... 652 0.0
gb|U73940.1|OCU73940 Oryctolagus cuniculus membane-type 1 m... 644 0.0
gb|U83918.1|OCU83918 Oryctolagus cuniculus membrane type 1 ... 644 0.0
ref|NM_008608.1| Mus musculus matrix metalloproteinase 14 (... 641 0.0
emb|X83536.2|MMMTMMP Mus musculus mRNA for membrane-type ma... 641 0.0
dbj|AB047650.1|AB047650 Oryzias latipes MT5-MMP-del mRNA fo... 619 e-175
ref|NM_008609.1| Mus musculus matrix metalloproteinase 15 (... 346 4e-93
dbj|D86332.1|D86332 Mus musculus mRNA for membrane type-2 m... 346 4e-93
emb|AJ010731.1|MAJ10731 Mus musculus mRNA for membrane-type... 345 1e-92
ref|NM_011846.1| Mus musculus matrix metalloproteinase 17 (... 345 1e-92
dbj|AB021224.1|AB021224 Mus musculus mRNA for membrane-type... 345 1e-92
gb|BC006412.1|BC006412 Homo sapiens, matrix metalloproteina... 343 4e-92
ref|NM_002428.1| Homo sapiens matrix metalloproteinase 15 (... 343 4e-92
emb|Z48482.1|HSMMPM2 H.sapiens mRNA for membrane-type matri... 343 4e-92
dbj|D85510.1|D85510 Homo sapiens mRNA for SMCP-2, partial cds 339 4e-91
dbj|D86331.1|D86331 Human MT2-MMP gene for matrix metallopr... 339 5e-91
gb|AF185270.1|AF185270 Homo sapiens leukolysin (MMP25) mRNA... 337 2e-90
gb|AF145442.2|AF145442 Homo sapiens leukolysin mRNA, comple... 337 2e-90
ref|NM_022468.2| Homo sapiens matrix metalloproteinase 25 (... 337 2e-90
emb|AJ272137.1|HSA272137 Homo sapiens mRNA for membrane typ... 337 2e-90
emb|AJ239053.1|HSA239053 Homo sapiens mRNA for matrix metal... 337 2e-90
ref|NM_022718.1| Homo sapiens matrix metalloproteinase 25 (... 337 2e-90
gb|AF267160.1|AF267160 Ovis aries membrane type-1 metallopr... 337 2e-90
dbj|AB042328.1|AB042328 Homo sapiens mt6-mmp mRNA for membr... 334 2e-89
emb|X89576.1|HSMMP17 Homo sapiens mRNA for putative MT2-MMP... 332 9e-89
ref|NM_016155.2| Homo sapiens matrix metalloproteinase 17 (... 332 9e-89
dbj|AB021225.2| Homo sapiens mt4-mmp mRNA for membrane-type... 332 9e-89
ref|NM_002424.1| Homo sapiens matrix metalloproteinase 8 (n... 303 2e-80
gb|J05556.1|HUMCLGNA Homo sapiens collagenase mRNA, complet... 303 2e-80
ref|NM_008611.1| Mus musculus matrix metalloproteinase 8 (M... 298 1e-78
gb|U96696.1|MMU96696 Mus musculus neutrophil collagenase MN... 298 1e-78
ref|NM_079128.1| Drosophila melanogaster Matrix metalloprot... 296 4e-78
gb|AF271666.1|AF271666 Drosophila melanogaster matrix metal... 296 4e-78
ref|XM_080576.1| Matrix metalloproteinase 1, mRNA 296 4e-78
dbj|AB006779.1|AB006779 Oryctolagus cuniculus mRNA for matr... 296 5e-78
emb|Y13342.1|MMY13342 Mus musculus mRNA for collagenase-2 295 7e-78
gb|U88652.1|OCU88652 Oryctolagus cuniculus macrophage metal... 295 1e-77
dbj|D82053.1|D82053 Cynops pyrrhogaster mRNA for stromelysi... 294 2e-77
gb|AF034087.1|AF034087 Equus caballus matrix metalloprotein... 293 3e-77
ref|NM_022221.1| Rattus norvegicus neutrophil collagenease ... 292 6e-77
emb|AJ007288.1|RNO7288 Rattus norvegicus mRNA for neutrophi... 292 6e-77
dbj|AK020292.1|AK020292 Mus musculus adult male cecum cDNA,... 291 2e-76
ref|NM_019471.1| Mus musculus matrix metalloproteinase 10 (... 291 2e-76
emb|Y13185.1|MMMMP10 Mus musculus mRNA for stromelysin-2 291 2e-76
gb|AF201729.1|AF201729 Canis familiaris matrix metalloprote... 290 4e-76
emb|X81334.1|HSCOLLAG3 H.sapiens mRNA for collagenase-3 pro... 288 1e-75
emb|X75308.1|HSRNAC3 H.sapiens mRNA for collagenase 3 288 1e-75
emb|Z27093.1|XLSTROL3 X.laevis mRNA for stromelysin-3 288 1e-75
ref|NM_002427.2| Homo sapiens matrix metalloproteinase 13 (... 288 1e-75
gb|AF144758.1|AF144758 Bos taurus MT1-MMP protein (MMP-14) ... 286 4e-75
dbj|D82055.1|D82055 Cynops pyrrhogaster mRNA for collagenas... 286 5e-75
ref|NM_002426.1| Homo sapiens matrix metalloproteinase 12 (... 286 5e-75
gb|L23808.1|HUMHME Human metalloproteinase (HME) mRNA, comp... 286 5e-75
gb|AF144760.1|AF144760 Bos taurus MT3-MMP protein (MMP-16) ... 285 9e-75
gb|AF059201.1|AF059201 Oryctolagus cuniculus collagenase-3 ... 285 1e-74
gb|AF148882.1|AF148882 Equus caballus matrix metalloprotein... 284 2e-74
gb|M60616.1|RATCOL Rat collagenase (UMRCase) mRNA, 3' end 284 2e-74
emb|X54925.1|HSCOLL1 H.sapiens mRNA for type I interstitial... 283 5e-74
ref|NM_002421.2| Homo sapiens matrix metalloproteinase 1 (i... 283 5e-74
dbj|AK024818.1|AK024818 Homo sapiens cDNA: FLJ21165 fis, cl... 283 5e-74
gb|BC013875.1|BC013875 Homo sapiens, Similar to matrix meta... 283 5e-74
gb|L49412.1|XELMMP1G Xenopus laevis collagenase 3 (MMP-13) ... 282 6e-74
gb|U41824.1|XLU41824 Xenopus laevis collagenase-3 (gene A) ... 282 6e-74
emb|X54724.1|SSMMP1 Porcine mmp1 mRNA for matrix metallopro... 282 8e-74
emb|X05083.1|RNTRAN2R RAT mRNA for oncogene-induced transin-2 282 8e-74
gb|M65253.1|RATTAP34A Rat transformation-associated protein... 282 8e-74
gb|J03209.1|HUMMMP3A Human matrix metalloproteinase-3 (MMP-... 281 2e-73
emb|X05232.1|HSSTROMR Human mRNA for stromelysin 281 2e-73
gb|AF072685.1|AF072685 Bos taurus matrix metalloproteinase ... 281 2e-73
gb|L76275.1|XELCOLL Xenopus laevis collagenase 4 precursor ... 281 2e-73
ref|NM_002422.2| Homo sapiens matrix metalloproteinase 3 (s... 281 2e-73
emb|X05231.1|HSCOLLR Human mRNA for collagenase (E.C. 3.4.24) 280 2e-73
ref|NM_005940.2| Homo sapiens matrix metalloproteinase 11 (... 279 5e-73
ref|XM_009873.3| Homo sapiens matrix metalloproteinase 11 (... 279 5e-73
emb|X57766.1|HSSTROL3 Human stromelysin-3 mRNA 279 5e-73
gb|AE003464.1|AE003464 Drosophila melanogaster genomic scaf... 212 6e-73
gb|AC099037.1| Drosophila melanogaster, chromosome 2R, regi... 212 6e-73
gb|AC007925.5|AC007925 Drosophila melanogaster, chromosome ... 212 6e-73
gb|AC007581.5|AC007581 Drosophila melanogaster, chromosome ... 212 6e-73
ref|NM_010809.1| Mus musculus matrix metalloproteinase 3 (M... 278 1e-72
emb|X63162.1|MMTRANS1 M.musculus mRNA for transin-1 278 1e-72
gb|BC006725.1|BC006725 Mus musculus, matrix metalloproteina... 278 1e-72
gb|M13509.1|HUMCN2 Human skin collagenase mRNA, complete cds 278 1e-72
emb|X58256.1|BTCLG Bovine CLG mRNA for collagenase 278 1e-72
emb|X66402.1|MMSTLY M.musculus mRNA for stromelysin 1 278 1e-72
ref|NM_008606.1| Mus musculus matrix metalloproteinase 11 (... 278 1e-72
emb|Z12604.1|MMSTRMLY3 M.musculus mRNA for stromelysin-3 278 1e-72
gb|M25664.1|RABSTROM Rabbit metalloproteinase synovial cell... 277 2e-72
ref|NM_008607.1| Mus musculus matrix metalloproteinase 13 (... 275 9e-72
emb|X66473.1|MMPCOLLAG M.musculus mRNA for (pro)collagenase 275 9e-72
dbj|D82054.1|D82054 Cynops pyrrhogaster mRNA for stromelysi... 272 6e-71
ref|XM_058069.2| Homo sapiens matrix metalloproteinase 12 (... 150 7e-71
ref|NM_012980.1| Rattus norvegicus Matrix metalloproteinase... 271 2e-70
gb|U46034.1|RNU46034 Rattus norvegicus stromelysin 3 mRNA, ... 271 2e-70
gb|AF062392.1|AF062392 Gallus gallus matrix metalloproteina... 271 2e-70
gb|AF009922.1|AF009922 Bos taurus enamel metalloproteinase ... 270 2e-70
ref|XM_040728.1| Homo sapiens matrix metalloproteinase 10 (... 268 9e-70
ref|NM_002425.1| Homo sapiens matrix metalloproteinase 10 (... 268 9e-70
emb|X07820.1|HSSTROM2 Human mRNA for metalloproteinase stro... 268 9e-70
gb|BC002591.1|BC002591 Homo sapiens, matrix metalloproteina... 268 9e-70
gb|U54825.1|SSU54825 Sus scrofa matrix metalloproteinase mR... 266 3e-69
ref|NM_013903.1| Mus musculus matrix metalloproteinase 20 (... 263 3e-68
gb|AF155933.1|AF155933 Mus musculus matrix metalloproteinas... 263 3e-68
emb|Y12779.1|HSENAMELY H.sapiens mRNA for enamelysin 263 5e-68
ref|NM_004771.2| Homo sapiens matrix metalloproteinase 20 (... 263 5e-68
dbj|AB043536.1|AB043536 Oncorhynchus mykiss mmp mRNA for ma... 259 5e-67
gb|AF281673.1|AF281673 Tupaia belangeri matrix metalloprote... 258 9e-67
ref|NM_032006.1| Mus musculus collagenase-like A (Mcola-pen... 258 1e-66
emb|AJ278462.1|MMU278462 Mus musculus mRNA for putative mat... 258 1e-66
gb|BC019135.1|BC019135 Mus musculus, Similar to matrix meta... 258 2e-66
gb|AF070478.1|AF070478 Gallus gallus matrix metalloproteina... 256 5e-66
dbj|AB028240.1|AB028240 Salmo salar mRNA for matrix metallo... 251 1e-64
ref|NM_008605.1| Mus musculus matrix metalloproteinase 12 (... 251 1e-64
gb|M82831.1|MUSMETELAS Mus musculus macrophage metalloelast... 251 1e-64
ref|NM_053963.1| Rattus norvegicus matrix metalloproteinase... 248 9e-64
emb|X98517.1|RNMME R.norvegicus mRNA for macrophage metallo... 248 9e-64
ref|NM_022122.1| Homo sapiens matrix metalloproteinase 27 (... 248 2e-63
gb|AF195192.1|AF195192 Homo sapiens matrix metalloprotease ... 248 2e-63
ref|NM_021412.1| Mus musculus matrix metalloproteinase 19 (... 244 1e-62
gb|AF155221.1|AF155221 Mus musculus matrix metalloproteinas... 244 1e-62
gb|AF162446.1|AF162446 Mus musculus matrix metalloproteinas... 244 1e-62
gb|AF153199.1|AF153199 Mus musculus matrix metalloproteinas... 244 1e-62
ref|NM_032007.1| Mus musculus collagenase-like B (Mcolb-pen... 239 4e-61
emb|AJ278461.1|MMU278461 Mus musculus mRNA for putative mat... 239 4e-61
gb|U38321.1|HSU38321 Homo sapiens clone rasi-11 matrix meta... 236 5e-60
gb|U37791.1|HSU37791 Homo sapiens clone rasi-1 matrix metal... 236 5e-60
ref|NM_002429.2| Homo sapiens matrix metalloproteinase 19 (... 236 5e-60
emb|X92521.1|HSMMP19 H.sapiens mRNA for MMP-19 protein 236 5e-60
emb|Y08622.1|HSRMMP18 H.sapiens mRNA for matrix metalloprot... 234 2e-59
ref|NM_024302.2| Homo sapiens matrix metalloproteinase 28 (... 231 1e-58
gb|AF219624.1|AF219624 Homo sapiens matrix metalloproteinas... 231 1e-58
gb|AF330002.1|AF330002 Homo sapiens matrix metalloprotease ... 231 1e-58
gb|AF354290.1|AF354290 Xenopus laevis matrix metalloprotein... 231 2e-58
gb|AF315683.1|AF315683 Homo sapiens matrix metalloproteinas... 229 5e-58
gb|AC090980.5| Homo sapiens chromosome 8, clone RP11-433O22... 229 6e-58
gb|AF162688.1|AF162688 Hydra vulgaris matrix metalloprotein... 219 6e-55
gb|BC002631.1|BC002631 Homo sapiens, clone MGC:4164 IMAGE:3... 219 6e-55
ref|NM_032950.1| Homo sapiens matrix metalloproteinase 28 (... 219 6e-55
ref|XM_083968.1| Homo sapiens matrix metalloproteinase 28 (... 182 5e-53
gb|U65656.1|RNU65656 Rattus norvegicus gelatinase A mRNA, c... 207 3e-51
ref|NM_031054.1| Rattus norvegicus matrix metalloproteinase... 204 2e-50
emb|X71466.1|RNCOLL R. Norvegicus mRNA for 72 KDa type IV c... 204 2e-50
ref|NM_008610.1| Mus musculus matrix metalloproteinase 2 (M... 204 2e-50
gb|M84324.1|MUSIVCOL Mus musculus type IV collagenase mRNA,... 204 2e-50
gb|AF290428.1|AF290428 Bos taurus matrix metalloprotease 2 ... 204 2e-50
ref|XM_012503.2| Homo sapiens matrix metalloproteinase 2 (g... 203 4e-50
ref|NM_004530.1| Homo sapiens matrix metalloproteinase 2 (g... 203 4e-50
gb|J03210.1|HUMCN4GEL Human collagenase type IV mRNA, 3' end 203 4e-50
gb|BC002576.1|BC002576 Homo sapiens, matrix metalloproteina... 203 4e-50
gb|AF177217.1|AF177217 Canis familiaris matrix metalloprote... 202 1e-49
dbj|D63579.1|RABMM2 Oryctolagus cuniculus mRNA for matrix m... 201 2e-49
gb|AF097638.1|AF097638 Canis familiaris matrix metalloprote... 197 2e-48
gb|AF295805.1|AF295805 Sus scrofa gelatinase A (MMP-2) mRNA... 195 1e-47
emb|X02601.1|RNURFR1 Rat mRNA for 53 kD polypeptide induced... 193 4e-47
gb|AY037943.1| Xenopus laevis matrix metalloproteinase mRNA... 192 8e-47
dbj|AB033754.2|AB033754 Oryzias latipes gel-a mRNA for gela... 191 1e-46
dbj|AB021698.1|AB021698 Oncorhynchus mykiss mRNA for matrix... 191 2e-46
gb|U07775.1|GGU07775 Gallus gallus prepro-72kDa matrix meta... 190 3e-46
emb|X53598.1|PLHE6R P. lividus mRNA for hatching enzyme 190 3e-46
emb|AL121753.30|HSDJ614O4 Human DNA sequence from clone RP4... 187 3e-45
dbj|AB031323.1|AB031323 Sus scrofa mRNA for matrilysin, com... 186 4e-45
dbj|AB057752.1|AB057752 Paralichthys olivaceus MMP2 mRNA fo... 184 2e-44
gb|BC003635.1|BC003635 Homo sapiens, matrix metalloproteina... 182 8e-44
emb|X07819.1|HSPUMP1 Human pump-1 mRNA homolog. to metallop... 182 1e-43
emb|Z11887.1|HSPUMP1G H.sapiens PUMP-1 gene encoding PUMP 182 1e-43
ref|NM_002423.2| Homo sapiens matrix metalloproteinase 7 (m... 182 1e-43
dbj|AB000719.1|AB000719 Hemicentrotus pulcherrimus mRNA for... 176 6e-42
ref|NM_012864.1| Rattus norvegicus Matrix metalloproteinase... 176 6e-42
gb|L24374.1|RATMPMM Rattus norvegicus matrilysin (MMP-7) mR... 176 6e-42
gb|AF144759.1|AF144759 Bos taurus MT2-MMP protein (MMP-15) ... 175 1e-41
ref|NM_010810.1| Mus musculus matrix metalloproteinase 7 (M... 172 9e-41
gb|L36244.1|MUSMAT Mus musculus metalloproteinase matrilysi... 172 9e-41
gb|U04444.1|FDU04444 Felis domesticus PUMP-1 mRNA, partial cds 171 3e-40
ref|NM_071389.1| Caenorhabditis elegans 169 6e-40
dbj|AB007815.1|AB007815 Caenorhabditis elegans mRNA for mat... 169 6e-40
ref|XM_017384.1| Homo sapiens matrix metalloproteinase 7 (m... 137 3e-39
gb|U62529.1|ECU62529 Equus caballus matrix metalloproteinas... 167 4e-39
gb|AF267159.1|AF267159 Ovis aries gelatinase A mRNA, partia... 161 2e-37
gb|AF156935.1|AF156935 Synthetic construct stromelysin cata... 155 1e-35
gb|AF134714.1|AF134714 Bos taurus MMP-1 protein mRNA, parti... 153 4e-35
gb|AF149850.1|AF149850 Canis familiaris matrix metalloprote... 152 7e-35
emb|AL133448.4|CNS01DV2 Human chromosome 14 DNA sequence **... 147 2e-33
emb|AL135998.6|CNS01DVO Human chromosome 14 DNA sequence BA... 147 2e-33
dbj|AB007817.1|AB007817 Caenorhabditis elegans mRNA for mat... 147 3e-33
emb|AJ251531.1|HSA251531 Homo sapiens mRNA for matrilysin-2... 143 6e-32
gb|AF248646.1|AF248646 Homo sapiens matrix metalloproteinas... 143 6e-32
ref|XM_051704.1| Homo sapiens matrix metalloproteinase 26 (... 143 6e-32
ref|NM_021801.2| Homo sapiens matrix metalloproteinase 26 (... 143 6e-32
gb|AF291664.1|AF291664 Homo sapiens matrix metalloproteinas... 143 6e-32
gb|AF230354.1|AF230354 Homo sapiens matrix metalloproteinas... 142 1e-31
gb|AF022427.1|MM14MMP4 Mus musculus matrix metalloproteinas... 142 1e-31
dbj|AB057407.1|AB057407 Cyprinus carpio mRNA for matrix met... 142 1e-31
gb|U82541.1|XLU82541 Xenopus laevis matrix metalloproteinas... 140 3e-31
gb|AF072455.1|AF072455 Xenopus laevis gelatinase B (MMP-9) ... 140 3e-31
emb|X76537.1|MMSROM2 Mus musculus mRNA for stromelysin-2 140 5e-31
dbj|D82052.1|D82052 Cynops pyrrhogaster mRNA for gelatinase... 139 8e-31
dbj|AB057753.1|AB057753 Paralichthys olivaceus MMP9 mRNA fo... 139 8e-31
gb|U63725.1|GMU63725 Glycine max metalloproteinase mRNA, co... 139 1e-30
dbj|AB031324.1|AB031324 Sus scrofa mRNA for matrilysin-rela... 138 2e-30
dbj|AB054185.1|AB054185 Cynops pyrrhogaster mRNA for matrix... 137 2e-30
gb|AF222690.1|AF222690 Gallus gallus 75 kDa gelatinase mRNA... 137 2e-30
dbj|AB033755.1|AB033755 Oryzias latipes gel-b mRNA for gela... 137 3e-30
gb|S75623.1|S75623 collagenase [Rana catesbeiana=bullfrags,... 136 5e-30
ref|NM_022791.1| Homo sapiens matrix metalloproteinase 19 (... 135 1e-29
gb|U38431.1|HSU38431 Human clone rasi-6 matrix metalloprote... 135 1e-29
ref|XM_061185.1| Homo sapiens similar to matrix metalloprot... 133 4e-29
ref|NM_065193.1| protease 132 1e-28
dbj|AB043994.1|AB043994 Bos taurus bmmp-2 mRNA for MMP-2, p... 129 1e-27
gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II s... 128 1e-27
gb|BC006093.1|BC006093 Homo sapiens, matrix metalloproteina... 128 1e-27
ref|NM_130068.1| Arabidopsis thaliana chromosome 2 CHR2v12... 128 1e-27
ref|NM_004994.1| Homo sapiens matrix metalloproteinase 9 (g... 128 1e-27
gb|J05070.1|HUM4COLA Human type IV collagenase mRNA, comple... 128 1e-27
dbj|AB044413.1|AB044413 Sus scrofa MMP-3 mRNA for matrix me... 128 2e-27
gb|U89842.1|CFU89842 Canis familiaris gelatinase B mRNA, pa... 127 2e-27
dbj|AB007816.1|AB007816 Caenorhabditis elegans mRNA for mat... 127 3e-27
gb|AF169244.1|AF169244 Canis familiaris matrix metalloprote... 127 3e-27
dbj|D26514.1|RABMM9 Rabbit mRNA for matrix metalloproteinas... 127 4e-27
dbj|AB006421.3|AB006421 Canis familiaris mRNA for matrix me... 127 4e-27
ref|NM_104689.1| Arabidopsis thaliana chromosome 1 CHR1v12... 126 7e-27
gb|AC005966.2|T2K10 Arabidopsis thaliana chromosome 1 BAC T... 126 7e-27
gb|AC007258.3|AC007258 Arabidopsis thaliana chromosome I BA... 126 7e-27
emb|X78324.1|BTMMP9 B.taurus bmmp9 mRNA for matrix metallop... 126 7e-27
gb|AF022971.1|AF022971 Caenorhabditis elegans cosmid C31B8,... 125 1e-26
emb|Z27231.1|MMCLG4B M.musculus mRNA for type IV collagenas... 125 2e-26
gb|S67830.1|S67830 type IV collagenase=matrix metalloprotei... 125 2e-26
dbj|D12712.1|MUSGEL Mouse mRNA for gelatinase, complete cds 125 2e-26
ref|NM_013599.1| Mus musculus matrix metalloproteinase 9 (M... 125 2e-26
dbj|AK004651.1|AK004651 Mus musculus adult male lung cDNA, ... 125 2e-26
ref|NM_105685.1| Arabidopsis thaliana chromosome 1 CHR1v12... 124 2e-26
gb|AC002062.1|F20P5 Sequence of BAC F20P5 from Arabidopsis ... 124 2e-26
dbj|AB043996.1|AB043996 Bos taurus bmmp-9 mRNA for MMP-9, p... 124 2e-26
ref|NM_065195.1| Caenorhabditis elegans 124 3e-26
ref|NM_031055.1| Rattus norvegicus matrix metalloproteinase... 123 5e-26
gb|U24441.1|RNU24441 Rattus norvegicus gelatinase B (GelB) ... 123 5e-26
gb|U36476.1|RNU36476 Rattus norvegicus 92-kDa type IV colla... 123 5e-26
gb|AF062640.1|AF062640 Arabidopsis thaliana metalloproteina... 123 6e-26
emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosom... 122 1e-25
emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ... 122 1e-25
ref|NM_117765.1| Arabidopsis thaliana chromosome 4 CHR4v12... 122 1e-25
gb|AF260254.1|AF260254 Mesocricetus auratus matrix metallop... 119 7e-25
gb|AF270937.1|AF270937 Plutella xylostella granulovirus gen... 119 7e-25
gb|AC002396.1|AC002396 Arabidopsis thaliana chromosome I BA... 118 1e-24
ref|NM_102260.1| Arabidopsis thaliana chromosome 1 CHR1v12... 118 1e-24
ref|NM_022792.1| Homo sapiens matrix metalloproteinase 19 (... 118 1e-24
gb|U38322.1|HSU38322 Homo sapiens clone rasi-9 matrix metal... 118 1e-24
ref|XM_055373.2| Homo sapiens hypothetical gene LOC115169 (... 118 2e-24
gb|AF162221.1|AF162221 Xestia c-nigrum granulovirus genome,... 118 2e-24
gb|AF135232.1|AF135232 Bos taurus MMP-3 protein mRNA, parti... 115 2e-23
emb|AJ133371.1|CSA133371 Cucumis sativus mRNA for matrix me... 114 3e-23
gb|AF099191.1|AF099191 Caenorhabditis elegans MMP-like prot... 114 3e-23
ref|NM_066198.1| zinc protease 114 3e-23
gb|BC013118.1|BC013118 Homo sapiens, Similar to matrix meta... 114 4e-23
gb|AF011391.1|AF011391 Cavia porcellus collagenase-3 mRNA, ... 112 1e-22
gb|AE003832.2|AE003832 Drosophila melanogaster genomic scaf... 105 2e-22
gb|AC005894.1|AC005894 Drosophila melanogaster, chromosome ... 105 2e-22
gb|AC099009.1| Drosophila melanogaster, chromosome 2R, regi... 105 2e-22
gb|AC006472.2|AC006472 Drosophila melanogaster, chromosome ... 105 2e-22
ref|NM_004142.1| Homo sapiens matrix metalloproteinase-like... 111 2e-22
emb|AJ003144.1|HSAJ03144 Homo sapiens mRNA for metalloprote... 111 2e-22
gb|AF022432.1|MM14MMP9 Mus musculus matrix metalloproteinas... 111 2e-22
gb|AF303741.1|AF303741 Chilo iridescent virus complete genome 111 2e-22
gb|AF201725.1|AF201725 Sus scrofa stromelysin (mmp3) mRNA, ... 109 7e-22
ref|NM_077711.1| matrix metalloprotease 109 9e-22
gb|U53466.2|U53466 Cydia pomonella granulovirus, complete g... 108 2e-21
gb|AF030866.1|AF030866 Mesocricetus auratus collagenase-3 m... 108 2e-21
gb|AC069300.7|AC069300 Oryza sativa chromosome 10 BAC OSJNB... 107 4e-21
emb|AJ243311.1|ECA243311 Equus caballus mRNA for matrix met... 105 1e-20
emb|AJ010314.1|EAJ10314 Equus caballus mRNA for matrix meta... 105 1e-20
ref|NM_004659.1| Homo sapiens matrix metalloproteinase 23A ... 101 2e-19
gb|AF056200.1|AF056200 Homo sapiens metalloprotease mmp21/2... 101 2e-19
gb|AF135235.1|AF135235 Bos taurus MMP-13 protein mRNA, part... 101 2e-19
ref|XM_084061.1| Homo sapiens matrix metalloproteinase 23B ... 100 3e-19
ref|NM_053606.1| Rattus norvegicus Matrix metalloproteinase... 100 3e-19
dbj|AB010960.1|AB010960 Rattus norvegicus mRNA for MIFR, co... 100 3e-19
ref|NM_006983.1| Homo sapiens matrix metalloproteinase 23B ... 100 3e-19
emb|AJ005256.1|HSAJ5256 Homo sapiens mRNA for MMP-23 100 3e-19
gb|AF022428.1|MM14MMP5 Mus musculus matrix metalloproteinas... 100 3e-19
gb|AF150057.1|AF150057 Ambystoma mexicanum matrix metallopr... 100 3e-19
dbj|AB010961.1|AB010961 Homo sapiens mRNA for MIFR-1, compl... 100 3e-19
gb|AF111100.1|AF111100 Canis familiaris matrix metalloprote... 100 4e-19
gb|AF135231.1|AF135231 Bos taurus MMP-2 protein mRNA, parti... 100 7e-19
ref|NM_011985.1| Mus musculus matrix metalloproteinase 23 (... 98 2e-18
gb|AF085742.1|AF085742 Mus musculus CAMP metalloproteinase ... 98 2e-18
gb|AF202971.1|AF202971 Sus scrofa matrix metalloproteinase ... 96 8e-18
gb|AF150056.1|AF150056 Ambystoma mexicanum matrix metallopr... 96 1e-17
gb|AF135233.1|AF135233 Bos taurus MMP-7 protein mRNA, parti... 95 2e-17
gb|AF150055.1|AF150055 Ambystoma mexicanum matrix metallopr... 92 1e-16
gb|AF150058.1|AF150058 Ambystoma mexicanum matrix metallopr... 92 2e-16
gb|AF069642.1|AF069642 Bos taurus matrix metalloproteinase ... 91 3e-16
gb|AF055671.1|AF055671 Mesocricetus auratus collagenase 2 (... 90 6e-16
gb|AF069644.1|AF069644 Bos taurus matrix metalloproteinase ... 90 7e-16
gb|AF069643.1|AF069643 Sus scrofa matrix metalloproteinase ... 89 1e-15
gb|AF069641.1|AF069641 Sus scrofa matrix metalloproteinase ... 89 1e-15
gb|AF055670.1|AF055670 Cavia porcellus collagenase 2 (MMP-8... 87 6e-15
dbj|AP000789.4|AP000789 Homo sapiens genomic DNA, chromosom... 86 1e-14
gb|AF267157.1|AF267157 Ovis aries MMP-13 mRNA, partial cds 85 2e-14
dbj|AP000647.4|AP000647 Homo sapiens genomic DNA, chromosom... 84 3e-14
gb|AF267158.1|AF267158 Ovis aries matrilysin mRNA, partial cds 84 4e-14
gb|AF022430.1|MM14MMP7 Mus musculus matrix metalloproteinas... 83 7e-14
gb|AF277294.1|AF277294 Gnathostoma spinigerum matrix metall... 83 9e-14
emb|X72795.1|MMMMP9B M.musculus mRNA for gelatinase B 82 1e-13
gb|U78045.1|HSU78045 Human collagenase and stromelysin gene... 80 6e-13
gb|AF267156.1|AF267156 Ovis aries interstitial collagenase ... 80 6e-13
gb|AF145123.1|AF145123 Ambystoma mexicanum matrix metallopr... 79 1e-12
emb|AJ003147.1|HSAJ03147 Homo sapiens complete genomic sequ... 79 2e-12
gb|AC006237.1|AC006237 Homo sapiens chromosome 17, clone hR... 79 2e-12
gb|AF123396.1|AF123396 Canis familiaris gelatinase B mRNA, ... 78 2e-12
dbj|AP000619.4|AP000619 Homo sapiens genomic DNA, chromosom... 78 2e-12
gb|M55588.1|HUMCLG4Q08 Human collagenase type IV (CLG4) gen... 76 8e-12
gb|AC092352.2| Homo sapiens chromosome 16 clone RP11-2M17, ... 76 8e-12
gb|AC007336.5|AC007336 Homo sapiens chromosome 16 clone RP1... 76 8e-12
gb|BC012690.1|BC012690 Mus musculus, Similar to vitronectin... 76 1e-11
dbj|AP000851.4|AP000851 Homo sapiens genomic DNA, chromosom... 75 1e-11
emb|X03168.1|HSSPROT Human mRNA for S-protein 75 2e-11
gb|M55442.1|RABGP66 O.cuniculus domesticus vitronectin (gly... 75 2e-11
gb|M17821.1|RABCN2 Oryctolagus cuniculus collagenase-1 prec... 74 3e-11
gb|BC018521.1|BC018521 Mus musculus, vitronectin, clone MGC... 74 4e-11
gb|M77123.1|MUSVITA Mouse vitronectin mRNA, complete cds 74 4e-11
ref|NM_011707.1| Mus musculus vitronectin (Vtn), mRNA 74 4e-11
emb|X63003.1|MMVITN M.musculus mRNA for vitronectin 74 4e-11
dbj|AK011736.1|AK011736 Mus musculus 10 days embryo whole b... 74 4e-11
emb|Y11030.1|GGVITRO G.gallus mRNA for vitronectin 74 4e-11
gb|U51571.1|CPU51571 Cavia porcellus stromelysin 1 mRNA, pa... 50 5e-11
emb|AJ006411.1|OMY6411 Oncorhynchus mykiss mRNA for collage... 74 5e-11
gb|M64996.1|CRBLIMUNEC Limulus polyphemus limunectin gene 73 7e-11
ref|XM_031492.1| Homo sapiens vitronectin (serum spreading ... 73 9e-11
ref|NM_000638.2| Homo sapiens vitronectin (serum spreading ... 73 9e-11
gb|BC005046.1|BC005046 Homo sapiens, clone MGC:12819 IMAGE:... 73 9e-11
gb|U64803.1|CCU64803 Coturnix coturnix nectinepsin mRNA, co... 73 9e-11
gb|AF156951.1|F156947S05 Mus musculus matrix metalloprotein... 72 2e-10
dbj|AP000349.1|AP000349 Homo sapiens genomic DNA, chromosom... 68 2e-10
ref|XM_061993.1| Homo sapiens similar to INTERSTITIAL COLLA... 71 3e-10
gb|AC005302.70| Mus musculus chromosome 10 clone rp21-481n4... 71 3e-10
gb|AF440693.1|AF440693 Mus musculus vitronectin mRNA, compl... 71 4e-10
emb|X72794.1|MMMMP9A M.musculus gene for gelatinase B 71 4e-10
gb|AY057902.1| Glycine max matrix metalloproteinase MMP2 (M... 71 4e-10
ref|NM_019156.1| Rattus norvegicus vitronectin (Vtn), mRNA 70 6e-10
gb|U44845.1|RNU44845 Rattus norvegicus vitronectin mRNA, co... 70 6e-10
ref|NM_074277.1| zinc metalloprotease 69 1e-09
ref|NM_022790.1| Homo sapiens matrix metalloproteinase 19 (... 69 1e-09
gb|U38320.1|HSU38320 Homo sapiens clone rasi-3 matrix metal... 69 1e-09
emb|AJ332942.1|HSA332942 Homo sapiens genomic sequence surr... 69 1e-09
gb|M19240.1|RABCN4 Oryctolagus cuniculus collagenase-1 prec... 69 2e-09
gb|AF040648.2| Caenorhabditis elegans cosmid H19M22, comple... 68 2e-09
emb|X65722.1|PLHATCHG P.lividus gene for hatching enzyme 68 3e-09
gb|M55584.1|HUMCLG4Q04 Human collagenase type IV (CLG4) gen... 68 3e-09
dbj|D61396.1|D61396 Porcine mRNA for vitronectin, complete cds 67 5e-09
emb|AJ338123.1|HSA338123 Homo sapiens genomic sequence surr... 67 5e-09
dbj|D63145.1|PIGVITRON Pig mRNA for vitronectin, complete cds 67 5e-09
gb|L22523.1|HUMMATRY05 Human matrilysin gene, exon 5 67 7e-09
gb|AC018375.8| Homo sapiens, clone RP11-3P24, complete sequ... 67 7e-09
gb|AC090893.5| Homo sapiens chromosome 11, clone RP11-390G2... 67 7e-09
dbj|AP001830.4|AP001830 Homo sapiens genomic DNA, chromosom... 67 7e-09
gb|AF291665.1|AF291665 Homo sapiens matrix metalloproteinas... 67 7e-09
dbj|AB043995.1|AB043995 Bos taurus bmmp-3 mRNA for MMP-3, p... 66 9e-09
gb|L36240.1|MUSMAT04 Mus musculus metalloproteinase matrily... 66 1e-08
gb|M68346.1|HUMIVCOL04 Human type IV collagenase (CLG4B) ge... 66 1e-08
gb|AF156950.1|F156947S04 Mus musculus matrix metalloprotein... 66 1e-08
emb|AL162458.10|AL162458 Human DNA sequence from clone RP11... 66 1e-08
gb|AF405705.1|AF405705 Homo sapiens matrix metalloproteinas... 65 1e-08
gb|L22522.1|HUMMATRY04 Human matrilysin gene, exon 4 65 2e-08
gb|AF022425.1|MM14MMP2 Mus musculus matrix metalloproteinas... 65 3e-08
emb|X07823.1|RN3TRAN4 Rat transin-3 gene exon 4 65 3e-08
emb|X07824.1|RN3TRAN5 Rat transin-3 gene exon 5 64 6e-08
gb|AF057062.1|AF057062 Homo sapiens metalloprotease mmp21/2... 63 7e-08
dbj|AB010962.1|AB010962 Homo sapiens mRNA for MIFR-2, compl... 63 7e-08
dbj|AP001486.4|AP001486 Homo sapiens genomic DNA, chromosom... 62 2e-07
emb|AJ329935.1|HSA329935 Homo sapiens genomic sequence surr... 62 2e-07
ref|XM_083245.1| 4878, mRNA 60 8e-07
gb|L36239.1|MUSMAT05 Mus musculus metalloproteinase matrily... 59 1e-06
emb|AJ339481.1|HSA339481 Homo sapiens genomic sequence surr... 59 1e-06
gb|M68350.1|HUMIVCOL08 Human type IV collagenase (CLG4B) ge... 59 1e-06
gb|U00037.1|CELT20H4 Caenorhabditis elegans cosmid T20H4 59 2e-06
gb|U00038.2| Caenorhabditis elegans cosmid T21D11, complete... 59 2e-06
ref|NM_000613.1| Homo sapiens hemopexin (HPX), mRNA 58 2e-06
gb|J03048.1|HUMHXMA Huma hemopexin mRNA, 3' end 58 2e-06
emb|X02537.1|HSHEPEXR Human mRNA for serum beta-glycoprotei... 58 2e-06
gb|BC005395.1|BC005395 Homo sapiens, Similar to hemopexin, ... 58 2e-06
emb|X81640.1|HSCGN3PRO H.sapiens promoter region of collage... 58 2e-06
gb|U70919.1|XCU70919 Xestia c-nigrum granulosis virus matri... 57 5e-06
emb|X16429.1|OCHEMOPEX O.cuniculus mRNA for hemopexin 57 5e-06
gb|M55591.1|HUMCLG4Q11 Human collagenase type IV (CLG4) gen... 57 7e-06
gb|AF022426.1|MM14MMP3 Mus musculus matrix metalloproteinas... 57 7e-06
gb|M17822.1|RABCN3 Oryctolagus cuniculus collagenase-1 prec... 56 9e-06
ref|NM_021400.1| Mus musculus proteoglycan 3 (megakaryocyte... 56 1e-05
dbj|AB034730.1|AB034730 Mus musculus mRNA, complete cds, si... 56 1e-05
gb|U41266.1| Caenorhabditis elegans cosmid EGAP1, complete ... 55 2e-05
emb|AJ339486.1|HSA339486 Homo sapiens genomic sequence surr... 55 2e-05
emb|X64020.1|RNTST2B R.norvegicus mRNA for transin/stromely... 54 2e-05
gb|AF022431.1|MM14MMP8 Mus musculus matrix metalloproteinas... 55 3e-05
gb|AF281360.1| Oncorhynchus mykiss putative vitronectin-lik... 55 3e-05
gb|AF147104.1|AF147104 Canis familiaris type IV collagenase... 55 3e-05
emb|Z95309.1|CEH36L18 Caenorhabditis elegans cosmid H36L18,... 51 6e-05
gb|AF156948.1|F156947S02 Mus musculus matrix metalloprotein... 52 2e-04
dbj|AK057197.1|AK057197 Homo sapiens cDNA FLJ32635 fis, clo... 51 3e-04
gb|AF056218.1|AF056218 Bos taurus superficial zone protein ... 51 3e-04
ref|XM_001738.4| Homo sapiens proteoglycan 4, (megakaryocyt... 51 3e-04
ref|NM_005807.1| Homo sapiens proteoglycan 4, (megakaryocyt... 51 3e-04
gb|U70136.1|HSU70136 Human megakaryocyte stimulating factor... 51 3e-04
gb|AF346497.1|AF346497 Photorhabdus luminescens strain W14 ... 51 4e-04
emb|AJ338213.1|HSA338213 Homo sapiens genomic sequence surr... 51 4e-04
gb|AC022911.6| Homo sapiens chromosome 18, clone RP11-722A1... 47 5e-04
gb|L22520.1|HUMMATRY02 Human matrilysin gene, exon 2 50 5e-04
gb|M55582.1|HUMCLG4Q02 Human collagenase type IV (CLG4) gen... 50 5e-04
gb|U25950.1|PMU25950 Proteus mirabilis metalloprotease gene... 49 0.001
gb|L36242.1|MUSMAT02 Mus musculus metalloproteinase matrily... 49 0.001
gb|AF064762.1|AF064762 Proteus mirabilis metalloprotease op... 49 0.001
dbj|AB052623.1|AB052623 Cyprinus carpio wap65 mRNA for warm... 47 0.004
gb|AF057061.1|AF057061 Homo sapiens metalloprotease mmp21/2... 47 0.004
gb|AF147750.1|AF147750 Canis familiaris matrix metalloprote... 47 0.005
gb|U14751.1|SSU14751 Sus scrofa hyaluronidase mRNA, complet... 47 0.005
ref|NM_053318.1| Rattus norvegicus hemopexin (Hpx), mRNA 45 0.016
gb|M62642.1|RATHMPX Rat (clone pRHx1) hemopexin mRNA, compl... 45 0.016
emb|Y18249.1|MTY18249 Medicago truncatula mRNA for MtN9 gen... 45 0.027
ref|XM_071726.2| Homo sapiens hypothetical gene LOC120781 (... 45 0.027
gb|AF022429.1|MM14MMP6 Mus musculus matrix metalloproteinas... 44 0.046
gb|AY064211.1| Caulobacter crescentus S-layer editing metal... 44 0.046
emb|AL360176.22|AL360176 Human DNA sequence from clone RP11... 44 0.046
gb|AE005750.1|AE005750 Caulobacter crescentus section 76 o... 44 0.061
gb|BC011774.1|BC011774 Homo sapiens, Similar to matrix meta... 44 0.061
emb|X07821.1|RN3TRAN2 Rat transin-3 gene exon 2 44 0.061
gb|M68344.1|HUMIVCOL02 Human type IV collagenase (CLG4B) ge... 43 0.079
emb|Y17314.1|PSY17314 Pseudomonas sp. 'TAC II 18' PAPRA gene 42 0.13
gb|AE007196.1|AE007196 Sinorhizobium meliloti plasmid pSymA... 42 0.18
gb|AC002324.1|AC002324 Mus musculus chromosome 11, clone 47... 41 0.30
emb|X72091.1|MMVITRO M.musculus gene for vitronectin 41 0.30
emb|Z68112.1|OMTHXLMR O.mykiss mRNA for hemopexin-like prot... 41 0.30
gb|M60395.1|ERWPRTBCDE Erwinia chrysanthemi prt locus encod... 41 0.30
gb|BC011246.1|BC011246 Mus musculus, clone MGC:19095 IMAGE:... 41 0.30
gb|U89889.1|MMU89889 Mus musculus hemopexin mRNA, partial cds 41 0.30
gb|M59229.1|ERWPRTCA E.chrysanthemi metalloprotease C (prtC... 41 0.30
gb|BC019901.1|BC019901 Homo sapiens, clone MGC:29981 IMAGE:... 41 0.30
emb|X55521.1|SMMESM6 Serratia marcescens metalloprotease gene 41 0.39
gb|AF063866.1|AF063866 Melanoplus sanguinipes entomopoxviru... 40 0.51
emb|X04127.1|SSPROT Serratia (sp. E-15) gene for extracellu... 40 0.51
gb|AF086353.1|HUMZD63C05 Homo sapiens full length insert cD... 40 0.67
ref|XM_100736.1| Homo sapiens LOC160118 (LOC160118), mRNA 40 0.67
dbj|D50437.1|CRAWAP65 Goldfish mRNA for warm temperature ac... 39 1.1
gb|AC024801.2| Caenorhabditis elegans cosmid Y50D7A, comple... 39 1.1
emb|AJ007827.1|PTO7827 Pseudomonas tolaasii eprA, eprI, epr... 39 1.1
gb|AF055334.1|AF055334 Homo sapiens metalloprotease isoform... 39 1.5
emb|AL031282.1|HS283E3 Human DNA sequence from clone 283E3 ... 39 1.5
dbj|AB031068.1|AB031068 Homo sapiens gene for MIFR/Femalysi... 39 1.5
gb|M93262.1|ERWPRTAB Erwinia chrysanthemi (prtA and prtB) g... 39 1.9
gb|U20861.1| Caenorhabditis elegans cosmid C28H8, complete ... 38 2.5
gb|AF083061.1|AF083061 Pseudomonas fluorescens protease Prt... 38 3.3
emb|X70011.1|ECPROTA E.chrysanthemi gene for protease A 38 3.3
dbj|AB013895.1|AB013895 Pseudomonas fluorescens gene for me... 38 3.3
gb|M37390.1|ERWPRTC E.chrysanthemi metalloprotease C (prtC)... 38 3.3
gb|AF004848.1|AF004848 Pseudomonas fluorescens alkaline pro... 37 5.7
gb|AF393466.1|AF393466 Uncultured crenarchaeote 74A4 partia... 37 5.7
gb|AF286062.1|AF286062 Pseudomonas brassicacearum phase var... 37 7.4
gb|AF382388.1|AF382388 Homo sapiens vitronectin (VTN) gene,... 36 9.7
emb|AJ318052.1|YRU318052 Yersinia ruckeri p1 gene for metal... 36 9.7
emb|AL158835.11|AL158835 Human DNA sequence from clone RP11... 36 9.7
gb|AC002094.1|AC002094 Genomic sequence from Human 17, comp... 36 9.7
>ref|NM_019724.1| Mus musculus matrix metalloproteinase 16 (Mmp16), mRNA
Length = 2055
Score = 1186 bits (3068), Expect = 0.0
Identities = 566/607 (93%), Positives = 566/607 (93%)
Frame = +1
Query: 1 MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 60
MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 55 MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 234
Query: 61 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY
Sbjct: 235 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 414
Query: 121 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 180
ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR
Sbjct: 415 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 594
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 595 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 774
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 775 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 954
Query: 301 XXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVF 360
HRSV GAKPNICDGNFNTLAILRREMFVF
Sbjct: 955 RPLPTVPPHRSVPPADPRRHDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMFVF 1134
Query: 361 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 420
KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ
Sbjct: 1135KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 1314
Query: 421 PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW 480
PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW
Sbjct: 1315PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW 1494
Query: 481 KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK 540
KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK
Sbjct: 1495KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK 1674
Query: 541 EGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK 600
EGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK
Sbjct: 1675EGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK 1854
Query: 601 RSMQEWV 607
RSMQEWV
Sbjct: 1855RSMQEWV 1875
>dbj|AB021228.1|AB021228 Mus musculus mRNA for membrane-type-3 matrix metalloproteinase,
complete cds
Length = 2055
Score = 1186 bits (3068), Expect = 0.0
Identities = 566/607 (93%), Positives = 566/607 (93%)
Frame = +1
Query: 1 MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 60
MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 55 MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 234
Query: 61 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY
Sbjct: 235 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 414
Query: 121 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 180
ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR
Sbjct: 415 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 594
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 595 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 774
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 775 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 954
Query: 301 XXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVF 360
HRSV GAKPNICDGNFNTLAILRREMFVF
Sbjct: 955 RPLPTVPPHRSVPPADPRRHDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMFVF 1134
Query: 361 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 420
KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ
Sbjct: 1135KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 1314
Query: 421 PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW 480
PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW
Sbjct: 1315PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW 1494
Query: 481 KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK 540
KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK
Sbjct: 1495KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK 1674
Query: 541 EGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK 600
EGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK
Sbjct: 1675EGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK 1854
Query: 601 RSMQEWV 607
RSMQEWV
Sbjct: 1855RSMQEWV 1875
>dbj|D85509.1|D85509 Rattus rattus mRNA for MT3-MMP, complete cds
Length = 3517
Score = 1179 bits (3051), Expect = 0.0
Identities = 563/607 (92%), Positives = 563/607 (92%)
Frame = +3
Query: 1 MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 60
MILLAFSSGRRLDFVH SGVFF QTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 432 MILLAFSSGRRLDFVHRSGVFFFQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 611
Query: 61 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY
Sbjct: 612 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 791
Query: 121 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 180
ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR
Sbjct: 792 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 971
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGD SPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 972 DVDITIIFASGFHGDRSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 1151
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 1152 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 1331
Query: 301 XXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVF 360
HRSV GAKPNICDGNFNTLAILRREMFVF
Sbjct: 1332 RPLPTVPPHRSVPPADPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMFVF 1511
Query: 361 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 420
KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ
Sbjct: 1512 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 1691
Query: 421 PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW 480
PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW
Sbjct: 1692 PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW 1871
Query: 481 KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK 540
KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK
Sbjct: 1872 KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK 2051
Query: 541 EGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK 600
EGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK
Sbjct: 2052 EGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK 2231
Query: 601 RSMQEWV 607
RSMQEWV
Sbjct: 2232 RSMQEWV 2252
>gb|AF282844.1|AF282844 Mus musculus matrix metalloproteinase 16 (Mmp16) mRNA, complete cds
Length = 1880
Score = 1177 bits (3046), Expect = 0.0
Identities = 563/607 (92%), Positives = 563/607 (92%)
Frame = +1
Query: 1 MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 60
MILLAFSSGRRLDFVH S VFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 7 MILLAFSSGRRLDFVHRSVVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 186
Query: 61 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY
Sbjct: 187 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 366
Query: 121 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 180
ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR
Sbjct: 367 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 546
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGD SPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 547 DVDITIIFASGFHGDRSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 726
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 727 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 906
Query: 301 XXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVF 360
HRSV GAKPNICDGNFNTLAILRREMFVF
Sbjct: 907 RPLPTVPPHRSVPPADPRRHDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMFVF 1086
Query: 361 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 420
KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ
Sbjct: 1087KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 1266
Query: 421 PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW 480
PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW
Sbjct: 1267PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW 1446
Query: 481 KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK 540
KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK
Sbjct: 1447KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK 1626
Query: 541 EGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK 600
EGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK
Sbjct: 1627EGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK 1806
Query: 601 RSMQEWV 607
RSMQEWV
Sbjct: 1807RSMQEWV 1827
>ref|NM_005941.2| Homo sapiens matrix metalloproteinase 16 (membrane-inserted)
(MMP16), transcript variant 1, mRNA
Length = 2589
Score = 1171 bits (3030), Expect = 0.0
Identities = 557/607 (91%), Positives = 563/607 (91%)
Frame = +2
Query: 1 MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 60
MILL FS+GRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 113 MILLTFSTGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 292
Query: 61 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKF+IRRKRY
Sbjct: 293 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFHIRRKRY 472
Query: 121 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 180
ALTGQKWQHKHITYSIKNVTPKVGDPETR+AIRRAFDVWQNVTPLTFEEVPYSELENGKR
Sbjct: 473 ALTGQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKR 652
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 653 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 832
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 833 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 1012
Query: 301 XXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVF 360
HRS+ GAKPNICDGNFNTLAILRREMFVF
Sbjct: 1013RPLPTVPPHRSIPPADPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMFVF 1192
Query: 361 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 420
KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ
Sbjct: 1193KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 1372
Query: 421 PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW 480
PGYPHDLITLG+GIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT+W
Sbjct: 1373PGYPHDLITLGSGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITVW 1552
Query: 481 KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK 540
KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDR K
Sbjct: 1553KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRVK 1732
Query: 541 EGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK 600
EG SPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK
Sbjct: 1733EGHSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK 1912
Query: 601 RSMQEWV 607
RSMQEWV
Sbjct: 1913RSMQEWV 1933
>dbj|D83646.1|HUMMETALL Homo sapiens mRNA for metalloproteinase, complete cds
Length = 2477
Score = 1171 bits (3030), Expect = 0.0
Identities = 557/607 (91%), Positives = 563/607 (91%)
Frame = +1
Query: 1 MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 60
MILL FS+GRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 1 MILLTFSTGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 180
Query: 61 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKF+IRRKRY
Sbjct: 181 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFHIRRKRY 360
Query: 121 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 180
ALTGQKWQHKHITYSIKNVTPKVGDPETR+AIRRAFDVWQNVTPLTFEEVPYSELENGKR
Sbjct: 361 ALTGQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKR 540
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 541 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 720
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 721 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 900
Query: 301 XXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVF 360
HRS+ GAKPNICDGNFNTLAILRREMFVF
Sbjct: 901 RPLPTVPPHRSIPPADPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMFVF 1080
Query: 361 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 420
KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ
Sbjct: 1081KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 1260
Query: 421 PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW 480
PGYPHDLITLG+GIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT+W
Sbjct: 1261PGYPHDLITLGSGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITVW 1440
Query: 481 KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK 540
KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDR K
Sbjct: 1441KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRVK 1620
Query: 541 EGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK 600
EG SPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK
Sbjct: 1621EGHSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK 1800
Query: 601 RSMQEWV 607
RSMQEWV
Sbjct: 1801RSMQEWV 1821
>dbj|D85511.1|D85511 Homo sapiens mRNA for MT3-MMP, complete cds
Length = 2052
Score = 1171 bits (3030), Expect = 0.0
Identities = 557/607 (91%), Positives = 563/607 (91%)
Frame = +3
Query: 1 MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 60
MILL FS+GRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 36 MILLTFSTGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 215
Query: 61 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKF+IRRKRY
Sbjct: 216 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFHIRRKRY 395
Query: 121 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 180
ALTGQKWQHKHITYSIKNVTPKVGDPETR+AIRRAFDVWQNVTPLTFEEVPYSELENGKR
Sbjct: 396 ALTGQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKR 575
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 576 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 755
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 756 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 935
Query: 301 XXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVF 360
HRS+ GAKPNICDGNFNTLAILRREMFVF
Sbjct: 936 RPLPTVPPHRSIPPADPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMFVF 1115
Query: 361 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 420
KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ
Sbjct: 1116KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 1295
Query: 421 PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW 480
PGYPHDLITLG+GIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT+W
Sbjct: 1296PGYPHDLITLGSGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITVW 1475
Query: 481 KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK 540
KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDR K
Sbjct: 1476KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRVK 1655
Query: 541 EGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK 600
EG SPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK
Sbjct: 1656EGHSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK 1835
Query: 601 RSMQEWV 607
RSMQEWV
Sbjct: 1836RSMQEWV 1856
>dbj|AB009303.1|AB009303 Homo sapiens mRNA for membrane-type matrix metalloproteinase 3,
complete cds
Length = 2116
Score = 1169 bits (3025), Expect = 0.0
Identities = 556/607 (91%), Positives = 563/607 (92%)
Frame = +2
Query: 1 MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 60
MILL FS+GRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 113 MILLTFSTGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 292
Query: 61 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKF+IRRKRY
Sbjct: 293 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFHIRRKRY 472
Query: 121 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 180
ALTGQKWQHKHITYSIKNVTPKVGDPETR+AIRRAFDVWQNVTPLTFEEVPYSELENGKR
Sbjct: 473 ALTGQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKR 652
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 653 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 832
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 833 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 1012
Query: 301 XXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVF 360
HRS+ GAKPNICDGNFNTLAILRREMFVF
Sbjct: 1013RPLPTVPPHRSIPPADPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMFVF 1192
Query: 361 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 420
KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ
Sbjct: 1193KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 1372
Query: 421 PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW 480
PGYPHDLITLG+GIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT+W
Sbjct: 1373PGYPHDLITLGSGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITVW 1552
Query: 481 KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK 540
KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPG+PRSILKDFMGCDGPTDR K
Sbjct: 1553KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGHPRSILKDFMGCDGPTDRVK 1732
Query: 541 EGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK 600
EG SPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK
Sbjct: 1733EGHSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK 1912
Query: 601 RSMQEWV 607
RSMQEWV
Sbjct: 1913RSMQEWV 1933
>ref|NM_080776.1| Rattus norvegicus matrix metalloproteinase 16 (Mmp16), mRNA
Length = 3519
Score = 1058 bits (2737), Expect(3) = 0.0
Identities = 502/546 (91%), Positives = 502/546 (91%)
Frame = +3
Query: 1 MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 60
MILLAFSSGRRLDFVH SGVFF QTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 432 MILLAFSSGRRLDFVHRSGVFFFQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 611
Query: 61 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY
Sbjct: 612 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 791
Query: 121 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 180
ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR
Sbjct: 792 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 971
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGD SPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 972 DVDITIIFASGFHGDRSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 1151
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 1152FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 1331
Query: 301 XXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVF 360
HRSV GAKPNICDGNFNTLAILRREMFVF
Sbjct: 1332RPLPTVPPHRSVPPADPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMFVF 1511
Query: 361 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 420
KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ
Sbjct: 1512KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 1691
Query: 421 PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW 480
PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW
Sbjct: 1692PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW 1871
Query: 481 KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK 540
KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK
Sbjct: 1872KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK 2051
Query: 541 EGLSPP 546
EGLSPP
Sbjct: 2052EGLSPP 2069
Score = 68.9 bits (167), Expect(3) = 0.0
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 577 LLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
LLVLVYTVFQFKRKGTPRHILYCKRSMQEWV
Sbjct: 2162 LLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 2254
Score = 55.5 bits (132), Expect(3) = 0.0
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 548 DVDIVIKLDNTASTVKAIAIVIPCILAL 575
DVDIVIKLDNTASTVKAIAIVIPCILAL
Sbjct: 2074 DVDIVIKLDNTASTVKAIAIVIPCILAL 2157
>dbj|D63886.1|D63886 Rattus sp. mRNA for MT3-MMP-del, complete cds
Length = 3519
Score = 1058 bits (2737), Expect(3) = 0.0
Identities = 502/546 (91%), Positives = 502/546 (91%)
Frame = +3
Query: 1 MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 60
MILLAFSSGRRLDFVH SGVFF QTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 432 MILLAFSSGRRLDFVHRSGVFFFQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 611
Query: 61 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY
Sbjct: 612 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 791
Query: 121 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 180
ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR
Sbjct: 792 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 971
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGD SPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 972 DVDITIIFASGFHGDRSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 1151
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 1152FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 1331
Query: 301 XXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVF 360
HRSV GAKPNICDGNFNTLAILRREMFVF
Sbjct: 1332RPLPTVPPHRSVPPADPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMFVF 1511
Query: 361 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 420
KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ
Sbjct: 1512KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 1691
Query: 421 PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW 480
PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW
Sbjct: 1692PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW 1871
Query: 481 KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK 540
KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK
Sbjct: 1872KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK 2051
Query: 541 EGLSPP 546
EGLSPP
Sbjct: 2052EGLSPP 2069
Score = 68.9 bits (167), Expect(3) = 0.0
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 577 LLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
LLVLVYTVFQFKRKGTPRHILYCKRSMQEWV
Sbjct: 2162 LLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 2254
Score = 55.5 bits (132), Expect(3) = 0.0
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 548 DVDIVIKLDNTASTVKAIAIVIPCILAL 575
DVDIVIKLDNTASTVKAIAIVIPCILAL
Sbjct: 2074 DVDIVIKLDNTASTVKAIAIVIPCILAL 2157
>gb|U66463.1|GGU66463 Gallus gallus membrane type-matrix metalloproteinase (MT3-MMP)
mRNA, complete cds
Length = 5736
Score = 1083 bits (2802), Expect = 0.0
Identities = 521/609 (85%), Positives = 539/609 (87%), Gaps = 2/609 (0%)
Frame = +1
Query: 1 MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 60
MI+LA S+G RLDFV S V FLQT +WILCATVC EQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 115 MIVLALSTGSRLDFVSQSRVLFLQTCVWILCATVCKAEQYFNVEVWLQKYGYLPPTDPRM 294
Query: 61 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSA+AAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY
Sbjct: 295 SVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 474
Query: 121 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 180
ALTGQKWQHKHI YSIKNVTPKVGD ETR+AIRRAFDVWQNVTPLTFEEVPY ELENGKR
Sbjct: 475 ALTGQKWQHKHIAYSIKNVTPKVGDAETRKAIRRAFDVWQNVTPLTFEEVPYIELENGKR 654
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 655 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 834
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 835 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDRIPPPT 1014
Query: 301 XXXXXXXXHRSV--XXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMF 358
HRS+ GAKPNICDGNFNTL ILRREMF
Sbjct: 1015RPLPTVPPHRSIPPADPRKNDRQPKPPRPPTGDKPSYPGAKPNICDGNFNTLVILRREMF 1194
Query: 359 VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTT 418
VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS+GNFVFFK NK+WVFKDTT
Sbjct: 1195VFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSEGNFVFFKSNKFWVFKDTT 1374
Query: 419 LQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT 478
LQPGYPHDLITLG+GIP HGIDSAIWWEDVGKTYFFKGDRYWRY EEM++MDPGYPKPIT
Sbjct: 1375LQPGYPHDLITLGSGIPSHGIDSAIWWEDVGKTYFFKGDRYWRYGEEMRSMDPGYPKPIT 1554
Query: 479 IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDR 538
IWKGIPESPQGAFVHKENGFTYF K K + ++L+VEPGYPRSILKDFMGCDGPTDR
Sbjct: 1555IWKGIPESPQGAFVHKENGFTYFIKEKSTGN-STKMLRVEPGYPRSILKDFMGCDGPTDR 1731
Query: 539 DKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILY 598
DK+ SP DDVDI+IKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKR+GTPRHILY
Sbjct: 1732DKDRHSPQDDVDIIIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKREGTPRHILY 1911
Query: 599 CKRSMQEWV 607
CKRSMQEWV
Sbjct: 1912CKRSMQEWV 1938
>gb|AF244994.1|AF244994 Scyliorhinus torazame membrane type-3 matrix metalloproteinase
(MT3-MMP) mRNA, complete cds
Length = 1842
Score = 914 bits (2361), Expect = 0.0
Identities = 437/607 (71%), Positives = 487/607 (79%), Gaps = 2/607 (0%)
Frame = +1
Query: 3 LLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSV 62
L G++L FV+ SG F+LQTLLWI+C+ VCG EQ F+VE+WLQKYGYL ++PRMSV
Sbjct: 25 LATLYKGKQLAFVY-SGAFYLQTLLWIICS-VCGEEQPFSVEIWLQKYGYLQASEPRMSV 198
Query: 63 LRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYAL 122
LRS+++M SA+AAMQQFYGI +TG +D NTIDWMKKPRCGVPDQ S +F++RRKRYAL
Sbjct: 199 LRSSQSMHSAVAAMQQFYGIKVTGTLDENTIDWMKKPRCGVPDQFGSSIRFSVRRKRYAL 378
Query: 123 TGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDV 182
TGQKW HKHITYSIKN TPKVG ET RAIRRAFDVWQNVTPLTFEE+PY ELEN KRDV
Sbjct: 379 TGQKWHHKHITYSIKNFTPKVGKLETHRAIRRAFDVWQNVTPLTFEEIPYVELENKKRDV 558
Query: 183 DITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFL 242
DITI+FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFL
Sbjct: 559 DITIMFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFL 738
Query: 243 VAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXX 302
VA HELGHALGLEHSNDP+AIMAPFYQYM+T+NF+LP DDLQGIQKIYG
Sbjct: 739 VAAHELGHALGLEHSNDPSAIMAPFYQYMDTENFQLPQDDLQGIQKIYGPPDKIAHPTKP 918
Query: 303 XXXXXXHR--SVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVF 360
HR GAKPNICDGNFNTLAILR EMFVF
Sbjct: 919 LPTVPPHRFNPPSDPRKPSRQPRPPRPPTRDKPSFPGAKPNICDGNFNTLAILRGEMFVF 1098
Query: 361 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 420
KD WFWRVRNNRV+DGYPMQI YFWRGLP + +DG FVF KG+KYWVFK+ TL+
Sbjct: 1099KDHWFWRVRNNRVLDGYPMQIAYFWRGLPSKHLSSLGTADGKFVFLKGSKYWVFKEATLE 1278
Query: 421 PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIW 480
GYP +++ LG+G+P GIDSA+WWEDVGKTYFFKGDRYWRY+EE + GYPK I+IW
Sbjct: 1279LGYPQNVVELGSGVPSQGIDSAVWWEDVGKTYFFKGDRYWRYNEETHVVGSGYPKSISIW 1458
Query: 481 KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDK 540
KGIP+SPQGAFV KE+G+T+FYKGKEYWKFNN L+VEP YPRSILK++MGCD DK
Sbjct: 1459KGIPKSPQGAFVSKESGYTFFYKGKEYWKFNNHKLRVEPSYPRSILKEWMGCDRTKTGDK 1638
Query: 541 EGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCK 600
+ DDVDIVIK+DNT STV AIAIVIPC LALC LVL+YTV QFKRKGTPRHILY K
Sbjct: 1639DRHDTQDDVDIVIKIDNTLSTVNAIAIVIPCTLALCFLVLIYTVVQFKRKGTPRHILYSK 1818
Query: 601 RSMQEWV 607
RSMQEWV
Sbjct: 1819RSMQEWV 1839
>dbj|AB021226.1|AB021226 Mus musculus mRNA for membrane-type-5 matrix metalloproteinase,
complete cds
Length = 4246
Score = 787 bits (2032), Expect = 0.0
Identities = 370/574 (64%), Positives = 438/574 (75%), Gaps = 2/574 (0%)
Frame = +3
Query: 36 GTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDW 95
G + F + WL+ YGYL P + R S L S + +QSA++ MQQFYGI +TG +D+ TI+W
Sbjct: 213 GADAPFAGQNWLKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEW 392
Query: 96 MKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRA 155
MKKPRCGVPD S + R KRYALTGQKW+ KHITYSI N TPKVG+ +TR+AIR+A
Sbjct: 393 MKKPRCGVPDHPHLSRRR--RNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQA 566
Query: 156 FDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG 215
FDVWQ VTPLTFEEVPY E+++ +++ DI I FASGFHGDSSPFDGEGGFLAHAYFPGPG
Sbjct: 567 FDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPG 746
Query: 216 IGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN 275
IGGDTHFDSDEPWTLGN NHDGNDLFLVAVHELGHALGLEHSNDP+AIMAPFYQYMET N
Sbjct: 747 IGGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 926
Query: 276 FKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXX 335
FKLP DDLQGIQKIYG R
Sbjct: 927 FKLPQDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPSERKHERHPRPPRPPLGDRPS 1106
Query: 336 X-GAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDA 394
GAKPNICDGNFNT+A+ R EMFVFKD+WFWR+RNNRV +GYPMQI FW+GLP IDA
Sbjct: 1107TPGAKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDA 1286
Query: 395 VYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFF 454
YE +DG FVFFKG+KYWVFK+ T++PGYPH L LG+ +P GID+A+ WE VGKTYFF
Sbjct: 1287AYERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTYFF 1466
Query: 455 KGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
KG+RYWRYSEE + DPGYPKPIT+WKGIP++PQGAF+ KE +TYFYKG++YWKF+NQ
Sbjct: 1467KGERYWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKEGYYTYFYKGRDYWKFDNQK 1646
Query: 515 LKVEPGYPRSILKDFMGC-DGPTDRDKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCIL 573
L VEPGYPR+IL+D+MGC +R KE P DDVDI++ +D+ +V A+A+V+PC L
Sbjct: 1647LSVEPGYPRNILRDWMGCKQKEVERRKERRLPQDDVDIMVTIDDVPGSVNAVAVVVPCTL 1826
Query: 574 ALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
+LCLLVL+YT+FQFK K P+ + Y KR +QEWV
Sbjct: 1827SLCLLVLLYTIFQFKNKAGPQPVTYYKRPVQEWV 1928
>ref|NM_031757.1| Rattus norvegicus matrix metalloproteinase 24 (membrane-inserted)
(Mmp24), mRNA
Length = 4245
Score = 786 bits (2030), Expect = 0.0
Identities = 370/574 (64%), Positives = 438/574 (75%), Gaps = 2/574 (0%)
Frame = +3
Query: 36 GTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDW 95
G + F + WL+ YGYL P + R S L S + +QSA++ MQQFYGI +TG +D+ TI+W
Sbjct: 240 GADAPFAGQNWLKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEW 419
Query: 96 MKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRA 155
MKKPRCGVPD S + R KRYALTGQKW+ KHITYSI N TPKVG+ +TR+AIR+A
Sbjct: 420 MKKPRCGVPDHPHLSRRR--RNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQA 593
Query: 156 FDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG 215
FDVWQ VTPLTFEEVPY E+++ +++ DI I FASGFHGDSSPFDGEGGFLAHAYFPGPG
Sbjct: 594 FDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPG 773
Query: 216 IGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN 275
IGGDTHFDSDEPWTLGN NHDGNDLFLVAVHELGHALGLEHSNDP+AIMAPFYQYMET N
Sbjct: 774 IGGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 953
Query: 276 FKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXX 335
FKLP DDLQGIQKIYG R
Sbjct: 954 FKLPQDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPSERKHERQPRPPRPPLGDRPS 1133
Query: 336 X-GAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDA 394
GAKPNICDGNFNT+A+ R EMFVFKD+WFWR+RNNRV +GYPMQI FW+GLP IDA
Sbjct: 1134TPGAKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDA 1313
Query: 395 VYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFF 454
YE +DG FVFFKG+KYWVFK+ T++PGYPH L LG+ +P GID+A+ WE VGKTYFF
Sbjct: 1314AYERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTYFF 1493
Query: 455 KGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
KG+RYWRYSEE + DPGYPKPIT+WKGIP++PQGAF+ KE +TYFYKG++YWKF+NQ
Sbjct: 1494KGERYWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKEGYYTYFYKGRDYWKFDNQK 1673
Query: 515 LKVEPGYPRSILKDFMGC-DGPTDRDKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCIL 573
L VEPGYPR+IL+D+MGC +R KE P DDVDI++ +D+ +V A+A+V+PC L
Sbjct: 1674LSVEPGYPRNILRDWMGCKQKEVERRKERRLPQDDVDIMVTIDDVPGSVNAVAVVVPCTL 1853
Query: 574 ALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
+LCLLVL+YT+FQFK K P+ + Y KR +QEWV
Sbjct: 1854SLCLLVLLYTIFQFKNKTGPQPVTYYKRPVQEWV 1955
>dbj|AB023659.1|AB023659 Rattus norvegicus mt5-mmp mRNA for membrane-type matrix
metalloproteinase 5, complete cds
Length = 4245
Score = 786 bits (2030), Expect = 0.0
Identities = 370/574 (64%), Positives = 438/574 (75%), Gaps = 2/574 (0%)
Frame = +3
Query: 36 GTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDW 95
G + F + WL+ YGYL P + R S L S + +QSA++ MQQFYGI +TG +D+ TI+W
Sbjct: 240 GADAPFAGQNWLKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEW 419
Query: 96 MKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRA 155
MKKPRCGVPD S + R KRYALTGQKW+ KHITYSI N TPKVG+ +TR+AIR+A
Sbjct: 420 MKKPRCGVPDHPHLSRRR--RNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQA 593
Query: 156 FDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG 215
FDVWQ VTPLTFEEVPY E+++ +++ DI I FASGFHGDSSPFDGEGGFLAHAYFPGPG
Sbjct: 594 FDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPG 773
Query: 216 IGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN 275
IGGDTHFDSDEPWTLGN NHDGNDLFLVAVHELGHALGLEHSNDP+AIMAPFYQYMET N
Sbjct: 774 IGGDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHN 953
Query: 276 FKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXX 335
FKLP DDLQGIQKIYG R
Sbjct: 954 FKLPQDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPSERKHERQPRPPRPPLGDRPS 1133
Query: 336 X-GAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDA 394
GAKPNICDGNFNT+A+ R EMFVFKD+WFWR+RNNRV +GYPMQI FW+GLP IDA
Sbjct: 1134TPGAKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDA 1313
Query: 395 VYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFF 454
YE +DG FVFFKG+KYWVFK+ T++PGYPH L LG+ +P GID+A+ WE VGKTYFF
Sbjct: 1314AYERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTYFF 1493
Query: 455 KGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
KG+RYWRYSEE + DPGYPKPIT+WKGIP++PQGAF+ KE +TYFYKG++YWKF+NQ
Sbjct: 1494KGERYWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKEGYYTYFYKGRDYWKFDNQK 1673
Query: 515 LKVEPGYPRSILKDFMGC-DGPTDRDKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCIL 573
L VEPGYPR+IL+D+MGC +R KE P DDVDI++ +D+ +V A+A+V+PC L
Sbjct: 1674LSVEPGYPRNILRDWMGCKQKEVERRKERRLPQDDVDIMVTIDDVPGSVNAVAVVVPCTL 1853
Query: 574 ALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
+LCLLVL+YT+FQFK K P+ + Y KR +QEWV
Sbjct: 1854SLCLLVLLYTIFQFKNKTGPQPVTYYKRPVQEWV 1955
>ref|NM_006690.2| Homo sapiens matrix metalloproteinase 24 (membrane-inserted)
(MMP24), mRNA
Length = 2623
Score = 786 bits (2029), Expect = 0.0
Identities = 371/572 (64%), Positives = 439/572 (75%), Gaps = 2/572 (0%)
Frame = +1
Query: 38 EQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMK 97
E F + WL+ YGYL P D R S L SA+ +QSA++ MQQFYGI +TG +D+ TI+WMK
Sbjct: 229 EAPFAGQNWLKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIEWMK 408
Query: 98 KPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFD 157
KPRCGVPD S + R KRYALTGQKW+ KHITYSI N TPKVG+ +TR+AIR+AFD
Sbjct: 409 KPRCGVPDHPHLSRRR--RNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQAFD 582
Query: 158 VWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 217
VWQ VTPLTFEEVPY E+++ +++ DI I FASGFHGDSSPFDGEGGFLAHAYFPGPGIG
Sbjct: 583 VWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 762
Query: 218 GDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFK 277
GDTHFDSDEPWTLGN NHDGNDLFLVAVHELGHALGLEHS+DP+AIMAPFYQYMET NFK
Sbjct: 763 GDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHNFK 942
Query: 278 LPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXX- 336
LP DDLQGIQKIYG R
Sbjct: 943 LPQDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPSERKHERQPRPPRPPLGDRPSTP 1122
Query: 337 GAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVY 396
G KPNICDGNFNT+A+ R EMFVFKD+WFWR+RNNRV +GYPMQI FW+GLP IDA Y
Sbjct: 1123GTKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDAAY 1302
Query: 397 ENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKG 456
E +DG FVFFKG+KYWVFK+ T++PGYPH L LG+ +P GID+A+ WE VGKTYFFKG
Sbjct: 1303ERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTYFFKG 1482
Query: 457 DRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILK 516
+RYWRYSEE + DPGYPKPIT+WKGIP++PQGAF+ KE +TYFYKG++YWKF+NQ L
Sbjct: 1483ERYWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKEGYYTYFYKGRDYWKFDNQKLS 1662
Query: 517 VEPGYPRSILKDFMGCD-GPTDRDKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILAL 575
VEPGYPR+IL+D+MGC+ +R KE P DDVDI++ +++ +V A+A+VIPCIL+L
Sbjct: 1663VEPGYPRNILRDWMGCNQKEVERRKERRLPQDDVDIMVTINDVPGSVNAVAVVIPCILSL 1842
Query: 576 CLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
C+LVLVYT+FQFK K P+ + Y KR +QEWV
Sbjct: 1843CILVLVYTIFQFKNKTGPQPVTYYKRPVQEWV 1938
>dbj|AB021227.1|AB021227 Homo sapiens mRNA for membrane-type-5 matrix metalloproteinase,
complete cds
Length = 2623
Score = 786 bits (2029), Expect = 0.0
Identities = 371/572 (64%), Positives = 439/572 (75%), Gaps = 2/572 (0%)
Frame = +1
Query: 38 EQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMK 97
E F + WL+ YGYL P D R S L SA+ +QSA++ MQQFYGI +TG +D+ TI+WMK
Sbjct: 229 EAPFAGQNWLKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIEWMK 408
Query: 98 KPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFD 157
KPRCGVPD S + R KRYALTGQKW+ KHITYSI N TPKVG+ +TR+AIR+AFD
Sbjct: 409 KPRCGVPDHPHLSRRR--RNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQAFD 582
Query: 158 VWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 217
VWQ VTPLTFEEVPY E+++ +++ DI I FASGFHGDSSPFDGEGGFLAHAYFPGPGIG
Sbjct: 583 VWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 762
Query: 218 GDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFK 277
GDTHFDSDEPWTLGN NHDGNDLFLVAVHELGHALGLEHS+DP+AIMAPFYQYMET NFK
Sbjct: 763 GDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHNFK 942
Query: 278 LPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXX- 336
LP DDLQGIQKIYG R
Sbjct: 943 LPQDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPSERKHERQPRPPRPPLGDRPSTP 1122
Query: 337 GAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVY 396
G KPNICDGNFNT+A+ R EMFVFKD+WFWR+RNNRV +GYPMQI FW+GLP IDA Y
Sbjct: 1123GTKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDAAY 1302
Query: 397 ENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKG 456
E +DG FVFFKG+KYWVFK+ T++PGYPH L LG+ +P GID+A+ WE VGKTYFFKG
Sbjct: 1303ERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTYFFKG 1482
Query: 457 DRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILK 516
+RYWRYSEE + DPGYPKPIT+WKGIP++PQGAF+ KE +TYFYKG++YWKF+NQ L
Sbjct: 1483ERYWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKEGYYTYFYKGRDYWKFDNQKLS 1662
Query: 517 VEPGYPRSILKDFMGCD-GPTDRDKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILAL 575
VEPGYPR+IL+D+MGC+ +R KE P DDVDI++ +++ +V A+A+VIPCIL+L
Sbjct: 1663VEPGYPRNILRDWMGCNQKEVERRKERRLPQDDVDIMVTINDVPGSVNAVAVVIPCILSL 1842
Query: 576 CLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
C+LVLVYT+FQFK K P+ + Y KR +QEWV
Sbjct: 1843CILVLVYTIFQFKNKTGPQPVTYYKRPVQEWV 1938
>gb|AF131284.1|AF131284 Homo sapiens membrane type 5 matrix metalloproteinase (MMP24) mRNA,
complete cds
Length = 2118
Score = 786 bits (2029), Expect = 0.0
Identities = 371/572 (64%), Positives = 439/572 (75%), Gaps = 2/572 (0%)
Frame = +1
Query: 38 EQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMK 97
E F + WL+ YGYL P D R S L SA+ +QSA++ MQQFYGI +TG +D+ TI+WMK
Sbjct: 226 EAPFAGQNWLKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIEWMK 405
Query: 98 KPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFD 157
KPRCGVPD S + R KRYALTGQKW+ KHITYSI N TPKVG+ +TR+AIR+AFD
Sbjct: 406 KPRCGVPDHPHLSRRR--RNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQAFD 579
Query: 158 VWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 217
VWQ VTPLTFEEVPY E+++ +++ DI I FASGFHGDSSPFDGEGGFLAHAYFPGPGIG
Sbjct: 580 VWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 759
Query: 218 GDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFK 277
GDTHFDSDEPWTLGN NHDGNDLFLVAVHELGHALGLEHS+DP+AIMAPFYQYMET NFK
Sbjct: 760 GDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHNFK 939
Query: 278 LPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXX- 336
LP DDLQGIQKIYG R
Sbjct: 940 LPQDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPSERKHERQPRPPRPPLGDRPSTP 1119
Query: 337 GAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVY 396
G KPNICDGNFNT+A+ R EMFVFKD+WFWR+RNNRV +GYPMQI FW+GLP IDA Y
Sbjct: 1120GTKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDAAY 1299
Query: 397 ENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKG 456
E +DG FVFFKG+KYWVFK+ T++PGYPH L LG+ +P GID+A+ WE VGKTYFFKG
Sbjct: 1300ERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTYFFKG 1479
Query: 457 DRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILK 516
+RYWRYSEE + DPGYPKPIT+WKGIP++PQGAF+ KE +TYFYKG++YWKF+NQ L
Sbjct: 1480ERYWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKEGYYTYFYKGRDYWKFDNQKLS 1659
Query: 517 VEPGYPRSILKDFMGCD-GPTDRDKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILAL 575
VEPGYPR+IL+D+MGC+ +R KE P DDVDI++ +++ +V A+A+VIPCIL+L
Sbjct: 1660VEPGYPRNILRDWMGCNQKEVERRKERRLPQDDVDIMVTINDVPGSVNAVAVVIPCILSL 1839
Query: 576 CLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
C+LVLVYT+FQFK K P+ + Y KR +QEWV
Sbjct: 1840CILVLVYTIFQFKNKTGPQPVTYYKRPVQEWV 1935
>ref|XM_047216.1| Homo sapiens matrix metalloproteinase 24 (membrane-inserted)
(MMP24), mRNA
Length = 2464
Score = 786 bits (2029), Expect = 0.0
Identities = 371/572 (64%), Positives = 439/572 (75%), Gaps = 2/572 (0%)
Frame = +1
Query: 38 EQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMK 97
E F + WL+ YGYL P D R S L SA+ +QSA++ MQQFYGI +TG +D+ TI+WMK
Sbjct: 67 EAPFAGQNWLKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIEWMK 246
Query: 98 KPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFD 157
KPRCGVPD S + R KRYALTGQKW+ KHITYSI N TPKVG+ +TR+AIR+AFD
Sbjct: 247 KPRCGVPDHPHLSRRR--RNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQAFD 420
Query: 158 VWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 217
VWQ VTPLTFEEVPY E+++ +++ DI I FASGFHGDSSPFDGEGGFLAHAYFPGPGIG
Sbjct: 421 VWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 600
Query: 218 GDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFK 277
GDTHFDSDEPWTLGN NHDGNDLFLVAVHELGHALGLEHS+DP+AIMAPFYQYMET NFK
Sbjct: 601 GDTHFDSDEPWTLGNANHDGNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHNFK 780
Query: 278 LPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXX- 336
LP DDLQGIQKIYG R
Sbjct: 781 LPQDDLQGIQKIYGPPAEPLEPTRPLPTLPVRRIHSPSERKHERQPRPPRPPLGDRPSTP 960
Query: 337 GAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVY 396
G KPNICDGNFNT+A+ R EMFVFKD+WFWR+RNNRV +GYPMQI FW+GLP IDA Y
Sbjct: 961 GTKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDAAY 1140
Query: 397 ENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKG 456
E +DG FVFFKG+KYWVFK+ T++PGYPH L LG+ +P GID+A+ WE VGKTYFFKG
Sbjct: 1141ERADGRFVFFKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTYFFKG 1320
Query: 457 DRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILK 516
+RYWRYSEE + DPGYPKPIT+WKGIP++PQGAF+ KE +TYFYKG++YWKF+NQ L
Sbjct: 1321ERYWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKEGYYTYFYKGRDYWKFDNQKLS 1500
Query: 517 VEPGYPRSILKDFMGCD-GPTDRDKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILAL 575
VEPGYPR+IL+D+MGC+ +R KE P DDVDI++ +++ +V A+A+VIPCIL+L
Sbjct: 1501VEPGYPRNILRDWMGCNQKEVERRKERRLPQDDVDIMVTINDVPGSVNAVAVVIPCILSL 1680
Query: 576 CLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
C+LVLVYT+FQFK K P+ + Y KR +QEWV
Sbjct: 1681CILVLVYTIFQFKNKTGPQPVTYYKRPVQEWV 1776
>ref|NM_010808.1| Mus musculus matrix metalloproteinase 24 (Mmp24), mRNA
Length = 2202
Score = 780 bits (2015), Expect = 0.0
Identities = 366/564 (64%), Positives = 432/564 (75%), Gaps = 2/564 (0%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL+ YGYL P + R S L S + +QSA++ MQQFYGI +TG +D+ TI+WMKKPRCGVPD
Sbjct: 244 WLKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKPRCGVPD 423
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
S + R KRYALTGQKW+ KHITYSI N TPKVG+ +TR+AIR+AFDVWQ VTPL
Sbjct: 424 HPHLSRRR--RNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQAFDVWQKVTPL 597
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
TFEEVPY E+++ +++ DI I FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD
Sbjct: 598 TFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 777
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
EPWTLGN NHDGNDLFLVAVHELGHALGLEHSNDP+AIMAPFYQYMET NFKLP DDLQG
Sbjct: 778 EPWTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFKLPQDDLQG 957
Query: 286 IQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDG 345
IQKIYG R GAKPNICDG
Sbjct: 958 IQKIYGPPAEPSGATRPLPTLPVRRIHSPSEKKHERHPRPPRRPWGRPSTPGAKPNICDG 1137
Query: 346 NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF 405
NFNT+A+ R EMFVFKD+WFWR+RNNRV +GYPMQI FW+GLP IDA YE +DG FVF
Sbjct: 1138NFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDAAYERADGRFVF 1317
Query: 406 FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHG-IDSAIWWEDVGKTYFFKGDRYWRYSE 464
FKG+KYWVFK+ T++PGYPH L LG+ +P G D+A+ WE VGKTYFFKG+RYWRYSE
Sbjct: 1318FKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGKPDTALRWEPVGKTYFFKGERYWRYSE 1497
Query: 465 EMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRS 524
E + DPGYPKPIT+WKGIP++PQGAF+ KE +TYFYKG++YWKF+NQ L VEPGYPR+
Sbjct: 1498ERRATDPGYPKPITVWKGIPQAPQGAFLSKEGYYTYFYKGRDYWKFDNQKLSVEPGYPRN 1677
Query: 525 ILKDFMGC-DGPTDRDKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYT 583
IL+D+MGC +R KE P DDVDI++ +D+ +V A+A+V+PC L+LCL VL+YT
Sbjct: 1678ILRDWMGCKQKEVERRKERRLPQDDVDIMVTIDDVPGSVNAVAVVVPCTLSLCLRVLLYT 1857
Query: 584 VFQFKRKGTPRHILYCKRSMQEWV 607
+FQFK K P+ + Y KR +QEWV
Sbjct: 1858IFQFKNKAGPQPVTYYKRPVQEWV 1929
>emb|AJ010262.1|MMU010262 Mus musculus mRNA for membrane-type matrix metalloproteinase 5
Length = 2202
Score = 780 bits (2015), Expect = 0.0
Identities = 366/564 (64%), Positives = 432/564 (75%), Gaps = 2/564 (0%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL+ YGYL P + R S L S + +QSA++ MQQFYGI +TG +D+ TI+WMKKPRCGVPD
Sbjct: 244 WLKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKPRCGVPD 423
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
S + R KRYALTGQKW+ KHITYSI N TPKVG+ +TR+AIR+AFDVWQ VTPL
Sbjct: 424 HPHLSRRR--RNKRYALTGQKWRQKHITYSIHNYTPKVGELDTRKAIRQAFDVWQKVTPL 597
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
TFEEVPY E+++ +++ DI I FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD
Sbjct: 598 TFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 777
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
EPWTLGN NHDGNDLFLVAVHELGHALGLEHSNDP+AIMAPFYQYMET NFKLP DDLQG
Sbjct: 778 EPWTLGNANHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFKLPQDDLQG 957
Query: 286 IQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDG 345
IQKIYG R GAKPNICDG
Sbjct: 958 IQKIYGPPAEPSGATRPLPTLPVRRIHSPSEKKHERHPRPPRRPWGRPSTPGAKPNICDG 1137
Query: 346 NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF 405
NFNT+A+ R EMFVFKD+WFWR+RNNRV +GYPMQI FW+GLP IDA YE +DG FVF
Sbjct: 1138NFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDAAYERADGRFVF 1317
Query: 406 FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHG-IDSAIWWEDVGKTYFFKGDRYWRYSE 464
FKG+KYWVFK+ T++PGYPH L LG+ +P G D+A+ WE VGKTYFFKG+RYWRYSE
Sbjct: 1318FKGDKYWVFKEVTVEPGYPHSLGELGSCLPREGKPDTALRWEPVGKTYFFKGERYWRYSE 1497
Query: 465 EMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRS 524
E + DPGYPKPIT+WKGIP++PQGAF+ KE +TYFYKG++YWKF+NQ L VEPGYPR+
Sbjct: 1498ERRATDPGYPKPITVWKGIPQAPQGAFLSKEGYYTYFYKGRDYWKFDNQKLSVEPGYPRN 1677
Query: 525 ILKDFMGC-DGPTDRDKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYT 583
IL+D+MGC +R KE P DDVDI++ +D+ +V A+A+V+PC L+LCL VL+YT
Sbjct: 1678ILRDWMGCKQKEVERRKERRLPQDDVDIMVTIDDVPGSVNAVAVVVPCTLSLCLRVLLYT 1857
Query: 584 VFQFKRKGTPRHILYCKRSMQEWV 607
+FQFK K P+ + Y KR +QEWV
Sbjct: 1858IFQFKNKAGPQPVTYYKRPVQEWV 1929
>ref|NM_022564.1| Homo sapiens matrix metalloproteinase 16 (membrane-inserted)
(MMP16), transcript variant 2, mRNA
Length = 1644
Score = 749 bits (1933), Expect = 0.0
Identities = 361/407 (88%), Positives = 365/407 (88%)
Frame = +2
Query: 1 MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 60
MILL FS+GRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 113 MILLTFSTGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 292
Query: 61 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKF+IRRKRY
Sbjct: 293 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFHIRRKRY 472
Query: 121 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 180
ALTGQKWQHKHITYSIKNVTPKVGDPETR+AIRRAFDVWQNVTPLTFEEVPYSELENGKR
Sbjct: 473 ALTGQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKR 652
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 653 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 832
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 833 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 1012
Query: 301 XXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVF 360
HRS+ GAKPNICDGNFNTLAILRREMFVF
Sbjct: 1013RPLPTVPPHRSIPPADPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMFVF 1192
Query: 361 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFK 407
KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFK
Sbjct: 1193KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFK 1333
>dbj|D83647.1|HUMMETALLA Homo sapiens mRNA for metalloproteinase, complete cds
Length = 1532
Score = 749 bits (1933), Expect = 0.0
Identities = 361/407 (88%), Positives = 365/407 (88%)
Frame = +1
Query: 1 MILLAFSSGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 60
MILL FS+GRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM
Sbjct: 1 MILLTFSTGRRLDFVHHSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRM 180
Query: 61 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRY 120
SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKF+IRRKRY
Sbjct: 181 SVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFHIRRKRY 360
Query: 121 ALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKR 180
ALTGQKWQHKHITYSIKNVTPKVGDPETR+AIRRAFDVWQNVTPLTFEEVPYSELENGKR
Sbjct: 361 ALTGQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKR 540
Query: 181 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 240
DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL
Sbjct: 541 DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDL 720
Query: 241 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXX 300
FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG
Sbjct: 721 FLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPT 900
Query: 301 XXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVF 360
HRS+ GAKPNICDGNFNTLAILRREMFVF
Sbjct: 901 RPLPTVPPHRSIPPADPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMFVF 1080
Query: 361 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFK 407
KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFK
Sbjct: 1081KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFK 1221
>dbj|AB047651.1|AB047651 Oryzias latipes MT5-MMP mRNA for membrane type-5 matrix
metalloproteinase, complete cds
Length = 2323
Score = 745 bits (1923), Expect = 0.0
Identities = 354/577 (61%), Positives = 430/577 (74%), Gaps = 12/577 (2%)
Frame = +2
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
+ WL+ YGYL P + + S L + M SALAAMQ+FYGI +TG +D T+ WM PRCG
Sbjct: 182 IPTWLRNYGYLRPHNNQTSDLEQEKAMHSALAAMQRFYGIPVTGILDETTMQWMWTPRCG 361
Query: 103 VPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNV 162
VPDQ S + R KRYALTGQKW+ K I+YSI N TPKVG +T+RAIR+AF VWQ V
Sbjct: 362 VPDQPHTSRRQ--RNKRYALTGQKWREKKISYSISNYTPKVGQKDTQRAIRQAFSVWQMV 535
Query: 163 TPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPL+F+EVPYSE++ ++ DI I FASGFHGDSSPFDGEGGFLAHAYFPG GIGGDTHF
Sbjct: 536 TPLSFQEVPYSEIKKEGKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGAGIGGDTHF 715
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDD 282
DSDEPWTLGNP+ DGNDLFLVAVHELGHALGLEHSNDP+AIMAPFYQYM+T +F+LP DD
Sbjct: 716 DSDEPWTLGNPSSDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMDTRDFQLPLDD 895
Query: 283 LQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXG-AKPN 341
LQGIQKIYG R+ G KPN
Sbjct: 896 LQGIQKIYGVPTAMLEPTRPLPTLPSRRTHSTSDRKHDRNSRPARPHSDRPALPGNGKPN 1075
Query: 342 ICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDG 401
+CDGNFNT+A RREMFVFKD+WFWR+RNN+V +GYPMQI FW+GLPP IDA YE SDG
Sbjct: 1076VCDGNFNTVAFFRREMFVFKDRWFWRLRNNKVQEGYPMQIDQFWKGLPPRIDAAYERSDG 1255
Query: 402 NFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWR 461
FVFFKG+K+WVFK+ + +PGYP L+ LG +P GID+A+ WE VGKTYFFKGD+YWR
Sbjct: 1256KFVFFKGDKFWVFKEVSAEPGYPQSLLELGRSLPKEGIDTALRWEPVGKTYFFKGDQYWR 1435
Query: 462 YSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGY 521
Y+EE T+DPGYPKPI++WKGIPE+PQGAF++++ +TYFYKGK+YWKF+NQ L VEPGY
Sbjct: 1436YNEERSTVDPGYPKPISVWKGIPEAPQGAFINRDGYYTYFYKGKDYWKFDNQKLTVEPGY 1615
Query: 522 PRSILKDFMGCDGPTDRDKEGLS------PPDDVDIVIKLDNTASTVKAIAIVIPCILAL 575
P+SIL+D+MGCD +D + G + P D+VDI++ +++ +TV AIA+VIPC+L+L
Sbjct: 1616PKSILRDWMGCD-QSDIEHSGGNRGDRQLPLDNVDIMVTINDVPTTVNAIAVVIPCVLSL 1792
Query: 576 CLLVLVYTVFQFKRKGT-----PRHILYCKRSMQEWV 607
C+LVLVYT+ QFK KG P+H Y K +QEWV
Sbjct: 1793CILVLVYTIVQFKNKGVQQNSIPQH--YYKYQVQEWV 1897
>dbj|AB010921.1|AB010921 Capra hircus MT1MMP mRNA for Membrane-type matrix
metalloproteinase-1, complete cds
Length = 1798
Score = 659 bits (1700), Expect = 0.0
Identities = 310/578 (53%), Positives = 408/578 (69%), Gaps = 2/578 (0%)
Frame = +2
Query: 32 ATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRN 91
A++ + F+ E WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+ +TGK D +
Sbjct: 95 ASLSSAQSSFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADAD 274
Query: 92 TIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRA 151
T+ M++PRCGVPD+ K N+RRKRYA+ G KWQH IT+ I+N TPKVG+ T A
Sbjct: 275 TMKAMRRPRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATFEA 454
Query: 152 IRRAFDVWQNVTPLTFEEVPYSELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAY 210
IR+AF VW++ TPL F EVPY+ + G ++ D+ I FA GFHGDS+PFDGEGGFLAHAY
Sbjct: 455 IRKAFRVWESATPLRFREVPYAYIREGHEKQADVMIFFAEGFHGDSTPFDGEGGFLAHAY 634
Query: 211 FPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQY 270
FPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGLEHSNDP+AIMAPFYQ+
Sbjct: 635 FPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQW 814
Query: 271 METDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXX 330
M+T+NF LP+DD +GIQ++YG S+
Sbjct: 815 MDTENFVLPDDDRRGIQQLYGSKSGSPTKIPPQPRTTSRPSIPDKPKNPTYG-------- 970
Query: 331 XXXXXXGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPP 390
PNICDGNF+T+A+LR EMFVFK++WFWRVR N+VMDGYPM I FWRGLP
Sbjct: 971 ---------PNICDGNFDTVAMLRGEMFVFKERWFWRVRKNQVMDGYPMPIGQFWRGLPA 1123
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGK 450
SI+ YE DG FVFFKG+K+WVF + +L+PGYP + LG G+P ID+A++W GK
Sbjct: 1124SINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDRIDAALFWMPSGK 1303
Query: 451 TYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKF 510
TYFF+G++Y+R++EE++ ++ YPK I +W+GIPESP+G+F+ + FTYFYKG +YWKF
Sbjct: 1304TYFFRGNKYYRFNEELRIVESEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKF 1483
Query: 511 NNQILKVEPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAS-TVKAIAIVI 569
NNQ LKVEPGYP+S L+D+MGC + EG +V I+I++D S V A A+V+
Sbjct: 1484NNQKLKVEPGYPKSALRDWMGCPSSGGQPDEGTEEETEV-IIIEVDEEGSGAVSAAAVVL 1660
Query: 570 PCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
P +L L +L + VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1661PVLLLLLVLAVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1774
>ref|NM_031056.1| Rattus norvegicus matrix metalloproteinase 14, membrane-inserted
(Mmp14), mRNA
Length = 2448
Score = 658 bits (1698), Expect = 0.0
Identities = 314/569 (55%), Positives = 405/569 (70%), Gaps = 2/569 (0%)
Frame = +2
Query: 41 FNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPR 100
F+ E WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+ +TGK D +T+ M++PR
Sbjct: 260 FSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLQVTGKADSDTMKAMRRPR 439
Query: 101 CGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQ 160
CGVPD+ K N+RRKRYA+ G KWQH IT+ I+N TPKVG+ T AIR+AF VW+
Sbjct: 440 CGVPDKFGTEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATFEAIRKAFRVWE 619
Query: 161 NVTPLTFEEVPYSELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+ TPL F EVPY+ + G ++ DI I+FA GFHGDS+PFDGEGGFLAHAYFPGP IGGD
Sbjct: 620 SATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGD 799
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
THFDS EPWT+ N + +GND+FLVAVHELGHALGLEHSNDP+AIMAPFYQ+M+T+NF LP
Sbjct: 800 THFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTENFVLP 979
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
+DD +GIQ++YG SV
Sbjct: 980 DDDRRGIQQLYGSKSGSPTKMPPQPRTTSRPSVPDKPRNPTYG----------------- 1108
Query: 340 PNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
PNICDGNF+T+A+LR EMFVFK++WFWRVRNN+VMDGYPM I FWRGLP SI+ YE
Sbjct: 1109PNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYERK 1288
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
DG FVFFKG+K+WVF + +L+PGYP + LG G+P ID+A++W GKTYFF+G++Y
Sbjct: 1289DGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNKY 1468
Query: 460 WRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEP 519
+R++EE + +D YPK I +W+GIPESP+G+F+ + FTYFYKG +YWKFNNQ LKVEP
Sbjct: 1469YRFNEEFRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKVEP 1648
Query: 520 GYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAS-TVKAIAIVIPCILALCLL 578
GYP+S L+D+MGC R EG +V I+I++D S V A A+V+P +L L +L
Sbjct: 1649GYPKSALRDWMGCPS-GGRPDEGTEEETEV-IIIEVDEEGSGAVSAAAVVLPVLLLLLVL 1822
Query: 579 VLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
+ VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1823AVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1909
>emb|X91785.1|RNMTMMPGN R.norvegicus mRNA for membrane-type metalloproteinase
Length = 2448
Score = 658 bits (1698), Expect = 0.0
Identities = 314/569 (55%), Positives = 405/569 (70%), Gaps = 2/569 (0%)
Frame = +2
Query: 41 FNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPR 100
F+ E WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+ +TGK D +T+ M++PR
Sbjct: 260 FSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLQVTGKADSDTMKAMRRPR 439
Query: 101 CGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQ 160
CGVPD+ K N+RRKRYA+ G KWQH IT+ I+N TPKVG+ T AIR+AF VW+
Sbjct: 440 CGVPDKFGTEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATFEAIRKAFRVWE 619
Query: 161 NVTPLTFEEVPYSELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+ TPL F EVPY+ + G ++ DI I+FA GFHGDS+PFDGEGGFLAHAYFPGP IGGD
Sbjct: 620 SATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGD 799
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
THFDS EPWT+ N + +GND+FLVAVHELGHALGLEHSNDP+AIMAPFYQ+M+T+NF LP
Sbjct: 800 THFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTENFVLP 979
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
+DD +GIQ++YG SV
Sbjct: 980 DDDRRGIQQLYGSKSGSPTKMPPQPRTTSRPSVPDKPRNPTYG----------------- 1108
Query: 340 PNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
PNICDGNF+T+A+LR EMFVFK++WFWRVRNN+VMDGYPM I FWRGLP SI+ YE
Sbjct: 1109PNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYERK 1288
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
DG FVFFKG+K+WVF + +L+PGYP + LG G+P ID+A++W GKTYFF+G++Y
Sbjct: 1289DGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNKY 1468
Query: 460 WRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEP 519
+R++EE + +D YPK I +W+GIPESP+G+F+ + FTYFYKG +YWKFNNQ LKVEP
Sbjct: 1469YRFNEEFRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKVEP 1648
Query: 520 GYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAS-TVKAIAIVIPCILALCLL 578
GYP+S L+D+MGC R EG +V I+I++D S V A A+V+P +L L +L
Sbjct: 1649GYPKSALRDWMGCPS-GGRPDEGTEEETEV-IIIEVDEEGSGAVSAAAVVLPVLLLLLVL 1822
Query: 579 VLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
+ VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1823AVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1909
>ref|NM_004995.2| Homo sapiens matrix metalloproteinase 14 (membrane-inserted)
(MMP14), mRNA
Length = 3558
Score = 657 bits (1695), Expect = 0.0
Identities = 315/586 (53%), Positives = 406/586 (68%), Gaps = 1/586 (0%)
Frame = +1
Query: 23 LQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGI 82
L TL L + F+ E WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+
Sbjct: 277 LLTLGTALASLGSAQSSSFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGL 456
Query: 83 NMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPK 142
+TGK D +T+ M++PRCGVPD+ K N+RRKRYA+ G KWQH IT+ I+N TPK
Sbjct: 457 QVTGKADADTMKAMRRPRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPK 636
Query: 143 VGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENG-KRDVDITIIFASGFHGDSSPFDG 201
VG+ T AIR+AF VW++ TPL F EVPY+ + G ++ DI I FA GFHGDS+PFDG
Sbjct: 637 VGEYATYEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDG 816
Query: 202 EGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPT 261
EGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGLEHS+DP+
Sbjct: 817 EGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSSDPS 996
Query: 262 AIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXX 321
AIMAPFYQ+M+T+NF LP+DD +GIQ++YG SV
Sbjct: 997 AIMAPFYQWMDTENFVLPDDDRRGIQQLYGGESGFPTKMPPQPRTTSRPSVPDKPKNPTY 1176
Query: 322 XXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQI 381
PNICDGNF+T+A+LR EMFVFK++WFWRVRNN+VMDGYPM I
Sbjct: 1177G-----------------PNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQVMDGYPMPI 1305
Query: 382 TYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDS 441
FWRGLP SI+ YE DG FVFFKG+K+WVF + +L+PGYP + LG G+P ID+
Sbjct: 1306GQFWRGLPASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDA 1485
Query: 442 AIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYF 501
A++W GKTYFF+G++Y+R++EE++ +D YPK I +W+GIPESP+G+F+ + FTYF
Sbjct: 1486ALFWMPNGKTYFFRGNKYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYF 1665
Query: 502 YKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAST 561
YKG +YWKFNNQ LKVEPGYP+S L+D+MGC R EG +V I+ +
Sbjct: 1666YKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPS-GGRPDEGTEEETEVIIIEVDEEGGGA 1842
Query: 562 VKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
V A A+V+P +L L +L + VF F+R GTPR +LYC+RS+ + V
Sbjct: 1843VSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPRRLLYCQRSLLDKV 1980
>gb|U41078.1|HSU41078 Human membrane-type matrix metalloproteinase-1 mRNA, complete cds
Length = 1749
Score = 657 bits (1695), Expect = 0.0
Identities = 315/586 (53%), Positives = 406/586 (68%), Gaps = 1/586 (0%)
Frame = +1
Query: 23 LQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGI 82
L TL L + F+ E WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+
Sbjct: 43 LLTLGTALASLGSAQSSSFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGL 222
Query: 83 NMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPK 142
+TGK D +T+ M++PRCGVPD+ K N+RRKRYA+ G KWQH IT+ I+N TPK
Sbjct: 223 QVTGKADADTMKAMRRPRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPK 402
Query: 143 VGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENG-KRDVDITIIFASGFHGDSSPFDG 201
VG+ T AIR+AF VW++ TPL F EVPY+ + G ++ DI I FA GFHGDS+PFDG
Sbjct: 403 VGEYATYEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDG 582
Query: 202 EGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPT 261
EGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGLEHS+DP+
Sbjct: 583 EGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSSDPS 762
Query: 262 AIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXX 321
AIMAPFYQ+M+T+NF LP+DD +GIQ++YG SV
Sbjct: 763 AIMAPFYQWMDTENFVLPDDDRRGIQQLYGGESGFPTKMPPQPRTTSRPSVPDKPKNPTY 942
Query: 322 XXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQI 381
PNICDGNF+T+A+LR EMFVFK++WFWRVRNN+VMDGYPM I
Sbjct: 943 G-----------------PNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQVMDGYPMPI 1071
Query: 382 TYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDS 441
FWRGLP SI+ YE DG FVFFKG+K+WVF + +L+PGYP + LG G+P ID+
Sbjct: 1072GQFWRGLPASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDA 1251
Query: 442 AIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYF 501
A++W GKTYFF+G++Y+R++EE++ +D YPK I +W+GIPESP+G+F+ + FTYF
Sbjct: 1252ALFWMPNGKTYFFRGNKYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYF 1431
Query: 502 YKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAST 561
YKG +YWKFNNQ LKVEPGYP+S L+D+MGC R EG +V I+ +
Sbjct: 1432YKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPS-GGRPDEGTEEETEVIIIEVDEEGGGA 1608
Query: 562 VKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
V A A+V+P +L L +L + VF F+R GTPR +LYC+RS+ + V
Sbjct: 1609VSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPRRLLYCQRSLLDKV 1746
>emb|Z48481.1|HSMMPM1 H.sapiens mRNA for membrane-type matrix metalloproteinase 1
Length = 3437
Score = 657 bits (1695), Expect = 0.0
Identities = 315/586 (53%), Positives = 406/586 (68%), Gaps = 1/586 (0%)
Frame = +3
Query: 23 LQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGI 82
L TL L + F+ E WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+
Sbjct: 156 LLTLGTALASLGSAQSSSFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGL 335
Query: 83 NMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPK 142
+TGK D +T+ M++PRCGVPD+ K N+RRKRYA+ G KWQH IT+ I+N TPK
Sbjct: 336 QVTGKADADTMKAMRRPRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPK 515
Query: 143 VGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENG-KRDVDITIIFASGFHGDSSPFDG 201
VG+ T AIR+AF VW++ TPL F EVPY+ + G ++ DI I FA GFHGDS+PFDG
Sbjct: 516 VGEYATYEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDG 695
Query: 202 EGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPT 261
EGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGLEHS+DP+
Sbjct: 696 EGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSSDPS 875
Query: 262 AIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXX 321
AIMAPFYQ+M+T+NF LP+DD +GIQ++YG SV
Sbjct: 876 AIMAPFYQWMDTENFVLPDDDRRGIQQLYGGESGFPTKMPPQPRTTSRPSVPDKPKNPTY 1055
Query: 322 XXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQI 381
PNICDGNF+T+A+LR EMFVFK++WFWRVRNN+VMDGYPM I
Sbjct: 1056G-----------------PNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQVMDGYPMPI 1184
Query: 382 TYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDS 441
FWRGLP SI+ YE DG FVFFKG+K+WVF + +L+PGYP + LG G+P ID+
Sbjct: 1185GQFWRGLPASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDA 1364
Query: 442 AIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYF 501
A++W GKTYFF+G++Y+R++EE++ +D YPK I +W+GIPESP+G+F+ + FTYF
Sbjct: 1365ALFWMPNGKTYFFRGNKYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYF 1544
Query: 502 YKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAST 561
YKG +YWKFNNQ LKVEPGYP+S L+D+MGC R EG +V I+ +
Sbjct: 1545YKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPS-GGRPDEGTEEETEVIIIEVDEEGGGA 1721
Query: 562 VKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
V A A+V+P +L L +L + VF F+R GTPR +LYC+RS+ + V
Sbjct: 1722VSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPRRLLYCQRSLLDKV 1859
>emb|X83535.1|HSMTMMP29 Homo sapiens mRNA for membrane-type matrix metalloproteinase
Length = 2365
Score = 657 bits (1695), Expect = 0.0
Identities = 315/586 (53%), Positives = 406/586 (68%), Gaps = 1/586 (0%)
Frame = +3
Query: 23 LQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGI 82
L TL L + F+ E WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+
Sbjct: 162 LLTLGTALASLGSAQSSSFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGL 341
Query: 83 NMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPK 142
+TGK D +T+ M++PRCGVPD+ K N+RRKRYA+ G KWQH IT+ I+N TPK
Sbjct: 342 QVTGKADADTMKAMRRPRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPK 521
Query: 143 VGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENG-KRDVDITIIFASGFHGDSSPFDG 201
VG+ T AIR+AF VW++ TPL F EVPY+ + G ++ DI I FA GFHGDS+PFDG
Sbjct: 522 VGEYATYEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDG 701
Query: 202 EGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPT 261
EGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGLEHS+DP+
Sbjct: 702 EGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSSDPS 881
Query: 262 AIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXX 321
AIMAPFYQ+M+T+NF LP+DD +GIQ++YG SV
Sbjct: 882 AIMAPFYQWMDTENFVLPDDDRRGIQQLYGGESGFPTKMPPQPRTTSRPSVPDKPKNPTY 1061
Query: 322 XXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQI 381
PNICDGNF+T+A+LR EMFVFK++WFWRVRNN+VMDGYPM I
Sbjct: 1062G-----------------PNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQVMDGYPMPI 1190
Query: 382 TYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDS 441
FWRGLP SI+ YE DG FVFFKG+K+WVF + +L+PGYP + LG G+P ID+
Sbjct: 1191GQFWRGLPASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDA 1370
Query: 442 AIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYF 501
A++W GKTYFF+G++Y+R++EE++ +D YPK I +W+GIPESP+G+F+ + FTYF
Sbjct: 1371ALFWMPNGKTYFFRGNKYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYF 1550
Query: 502 YKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAST 561
YKG +YWKFNNQ LKVEPGYP+S L+D+MGC R EG +V I+ +
Sbjct: 1551YKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPS-GGRPDEGTEEETEVIIIEVDEEGGGA 1727
Query: 562 VKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
V A A+V+P +L L +L + VF F+R GTPR +LYC+RS+ + V
Sbjct: 1728VSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPRRLLYCQRSLLDKV 1865
>dbj|D26512.1|HUMMTMMP Human mRNA for membrane type matrix metalloproteinase, comlete cds
Length = 3403
Score = 656 bits (1692), Expect = 0.0
Identities = 315/586 (53%), Positives = 405/586 (68%), Gaps = 1/586 (0%)
Frame = +1
Query: 23 LQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGI 82
L TL L + F+ E WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+
Sbjct: 154 LLTLGTALASLGSAQSSSFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGL 333
Query: 83 NMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPK 142
+TGK D +T+ M++PRCGVPD+ K N+RRKRYA+ G KWQH IT+ I+N TPK
Sbjct: 334 QVTGKADADTMKAMRRPRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPK 513
Query: 143 VGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENG-KRDVDITIIFASGFHGDSSPFDG 201
VG+ T AIR+AF VW++ TPL F EVPY+ + G ++ DI I FA GFHGDS+PFDG
Sbjct: 514 VGEYATYEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDG 693
Query: 202 EGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPT 261
EGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGLEHS+DP+
Sbjct: 694 EGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSSDPS 873
Query: 262 AIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXX 321
AIMAPFYQ+M+T+NF LP+DD +GIQ++YG SV
Sbjct: 874 AIMAPFYQWMDTENFVLPDDDRRGIQQLYGGESGFPTKMPPQPRTTSRPSVPDKPKNPTY 1053
Query: 322 XXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQI 381
PNICDGNF+T+A+LR EMFVFK +WFWRVRNN+VMDGYPM I
Sbjct: 1054G-----------------PNICDGNFDTVAMLRGEMFVFKKRWFWRVRNNQVMDGYPMPI 1182
Query: 382 TYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDS 441
FWRGLP SI+ YE DG FVFFKG+K+WVF + +L+PGYP + LG G+P ID+
Sbjct: 1183GQFWRGLPASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDA 1362
Query: 442 AIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYF 501
A++W GKTYFF+G++Y+R++EE++ +D YPK I +W+GIPESP+G+F+ + FTYF
Sbjct: 1363ALFWMPNGKTYFFRGNKYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYF 1542
Query: 502 YKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAST 561
YKG +YWKFNNQ LKVEPGYP+S L+D+MGC R EG +V I+ +
Sbjct: 1543YKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPS-GGRPDEGTEEETEVIIIEVDEEGGGA 1719
Query: 562 VKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
V A A+V+P +L L +L + VF F+R GTPR +LYC+RS+ + V
Sbjct: 1720VSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPRRLLYCQRSLLDKV 1857
>gb|AF290429.1|AF290429 Bos taurus membrane-type matrix metalloprotease 1 mRNA, complete
cds
Length = 1805
Score = 655 bits (1691), Expect = 0.0
Identities = 310/578 (53%), Positives = 407/578 (69%), Gaps = 2/578 (0%)
Frame = +3
Query: 32 ATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRN 91
A++ + F+ E WLQ++GYLPP D R RS +++ +A+AAMQ+FYG+ +TGK D +
Sbjct: 123 ASLSSAQSSFSPEAWLQQHGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADAD 302
Query: 92 TIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRA 151
T+ M++PRCGVPD+ K N+RRKRYA+ G KWQH IT+ I+N TP VG+ T A
Sbjct: 303 TMKAMRRPRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPNVGEYATFEA 482
Query: 152 IRRAFDVWQNVTPLTFEEVPYSELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAY 210
IR+AF VW++ TPL F EVPY+ + G ++ DI I FA GFHGDS+PFDGEGGFLAHAY
Sbjct: 483 IRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAY 662
Query: 211 FPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQY 270
FPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGLEHSNDP+AIMAPFYQ+
Sbjct: 663 FPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQW 842
Query: 271 METDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXX 330
M+T+NF LP+DD +GIQ++YG SV
Sbjct: 843 MDTENFVLPDDDRRGIQQLYGSKSGSPTKMPPQPRTTSRPSVPDKPKNPTYG-------- 998
Query: 331 XXXXXXGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPP 390
PNICDGNF+T+A+LR EMFVFK++WFWRVR N+VMDGYPM I FWRGLP
Sbjct: 999 ---------PNICDGNFDTVAMLRGEMFVFKERWFWRVRKNQVMDGYPMPIGQFWRGLPA 1151
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGK 450
SI+ YE DG FVFFKG+K+WVF + +L+PGYP + LG G+P ID+A++W GK
Sbjct: 1152SINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDRIDAALFWMPNGK 1331
Query: 451 TYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKF 510
TYFF+G++Y+R++EE++ ++ YPK I +W+GIPESP+G+F+ + FTYFYKG +YWKF
Sbjct: 1332TYFFRGNKYYRFNEELRIVESEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKF 1511
Query: 511 NNQILKVEPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAS-TVKAIAIVI 569
NNQ LKVEPGYP+S L+D+MGC + EG +V I+I++D S V A A+V+
Sbjct: 1512NNQKLKVEPGYPKSALRDWMGCPSSGGQPDEGTEEETEV-IIIEVDEEGSGAVSAAAVVL 1688
Query: 570 PCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
P +L L +L + VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1689PVLLLLLVLAVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1802
>emb|X90925.1|HSMTMMPPR H.sapiens mRNA for MT-MMP protein
Length = 2369
Score = 655 bits (1690), Expect = 0.0
Identities = 314/586 (53%), Positives = 405/586 (68%), Gaps = 1/586 (0%)
Frame = +2
Query: 23 LQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGI 82
L TL L + F+ E WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+
Sbjct: 155 LLTLGTALASLGSAQSSSFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGL 334
Query: 83 NMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPK 142
+TGK D +T+ M++PRCGVPD+ K N+RRKRYA+ G KWQH IT+ I+N TPK
Sbjct: 335 QVTGKADADTMKAMRRPRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPK 514
Query: 143 VGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENG-KRDVDITIIFASGFHGDSSPFDG 201
VG+ T AIR+AF VW++ TPL F EVPY+ + G ++ DI I FA GFHGDS+PFDG
Sbjct: 515 VGEYATYEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDG 694
Query: 202 EGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPT 261
EGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGLEHS+DP+
Sbjct: 695 EGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSSDPS 874
Query: 262 AIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXX 321
AIMAPFYQ+M+T+NF LP+DD +GIQ++YG SV
Sbjct: 875 AIMAPFYQWMDTENFVLPDDDRRGIQQLYGGESGFPTKMPPQPRTTSRPSVPDKPKNPTY 1054
Query: 322 XXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQI 381
PNICDGNF+T+A+LR EMFVFK++WFWRVRNN+VMDGYPM I
Sbjct: 1055G-----------------PNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQVMDGYPMPI 1183
Query: 382 TYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDS 441
FWRGLP SI+ YE DG FVFFKG+K+WVF + +L+PGYP + LG G+P ID+
Sbjct: 1184GQFWRGLPASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDA 1363
Query: 442 AIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYF 501
A++W GKTYFF+G++Y+R++EE++ +D YPK I +W+GIPESP+G+F+ + FTYF
Sbjct: 1364ALFWMPNGKTYFFRGNKYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYF 1543
Query: 502 YKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAST 561
YKG +YWKFNNQ LKVEPGYP+ L+D+MGC R EG +V I+ +
Sbjct: 1544YKGNKYWKFNNQKLKVEPGYPKPALRDWMGCPS-GGRPDEGTEEETEVIIIEVDEEGGGA 1720
Query: 562 VKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
V A A+V+P +L L +L + VF F+R GTPR +LYC+RS+ + V
Sbjct: 1721VSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPRRLLYCQRSLLDKV 1858
>gb|U54984.1|MMU54984 Mus musculus membrane-type matrix metalloproteinase 1 mRNA,
complete cds
Length = 2583
Score = 655 bits (1689), Expect = 0.0
Identities = 313/569 (55%), Positives = 404/569 (70%), Gaps = 2/569 (0%)
Frame = +1
Query: 41 FNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPR 100
F+ E WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+ +TGK D T+ M++PR
Sbjct: 343 FSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADLATMMAMRRPR 522
Query: 101 CGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQ 160
CGVPD+ K N+RRKRYA+ G KWQH IT+ I+N TPKVG+ T AIR+AF VW+
Sbjct: 523 CGVPDKFGTEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATFEAIRKAFRVWE 702
Query: 161 NVTPLTFEEVPYSELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+ TPL F EVPY+ + G ++ DI I+FA GFHGDS+PFDGEGGFLAHAYFPGP IGGD
Sbjct: 703 SATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGD 882
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
THFDS EPWT+ N + +GND+FLVAVHELGHALGLEHSNDP+AIM+PFYQ+M+T+NF LP
Sbjct: 883 THFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMSPFYQWMDTENFVLP 1062
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
+DD +GIQ++YG SV
Sbjct: 1063DDDRRGIQQLYGSKSGSPTKMPPQPRTTSRPSVPDKPKNPAYG----------------- 1191
Query: 340 PNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
PNICDGNF+T+A+LR EMFVFK++WFWRVRNN+VMDGYPM I FWRGLP SI+ YE
Sbjct: 1192PNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYERK 1371
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
DG FVFFKG+K+WVF + +L+PGYP + LG G+P ID+A++W GKTYFF+G++Y
Sbjct: 1372DGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNKY 1551
Query: 460 WRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEP 519
+R++EE + +D YPK I +W+GIPESP+G+F+ + FTYFYKG +YWKFNNQ LKVEP
Sbjct: 1552YRFNEEFRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKVEP 1731
Query: 520 GYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAS-TVKAIAIVIPCILALCLL 578
GYP+S L+D+MGC R EG +V I+I++D S V A A+V+P +L L +L
Sbjct: 1732GYPKSALRDWMGCPSGR-RPDEGTEEETEV-IIIEVDEEGSGAVSAAAVVLPVLLLLLVL 1905
Query: 579 VLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
+ VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1906AVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1992
>emb|X83537.1|RNMTMMP Rattus norvegicus mRNA for membrane-type matrix metalloproteinase
Length = 2412
Score = 654 bits (1688), Expect = 0.0
Identities = 312/569 (54%), Positives = 404/569 (70%), Gaps = 2/569 (0%)
Frame = +2
Query: 41 FNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPR 100
F+ E WLQ+YGYLPP D R RS +++ +A+AA+Q+FYG+ +TGK D +T+ M++PR
Sbjct: 269 FSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAIQRFYGLQVTGKADSDTMKAMRRPR 448
Query: 101 CGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQ 160
CGVPD+ K N+RRKRYA+ G KWQH IT+ I+N TPKVG+ T AIR+AF VW+
Sbjct: 449 CGVPDKFGTEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATFEAIRKAFRVWE 628
Query: 161 NVTPLTFEEVPYSELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+ TPL F EVPY+ + G ++ DI I+FA GFHGDS+PFDGEGGFLAHAYFPGP IGGD
Sbjct: 629 SATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGD 808
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
THFDS EPWT+ N + +GND+FLVAVHELGHALGLEHSNDP+ IMAPFYQ+M+T+NF LP
Sbjct: 809 THFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGLEHSNDPSDIMAPFYQWMDTENFVLP 988
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
+DD +GIQ++YG SV
Sbjct: 989 DDDRRGIQQLYGSKSGSPTKMPPQPRTTSRPSVPDKPRNPTYG----------------- 1117
Query: 340 PNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
PNICDGNF+T+A+LR EMFVFK++WFWRVRNN+VMDGYPM I FWRGLP SI+ YE
Sbjct: 1118PNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYERK 1297
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
DG FVFFKG+K+WVF + +L+PGYP + LG G+P ID+A++W GKTYFF+G++Y
Sbjct: 1298DGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNKY 1477
Query: 460 WRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEP 519
+R++EE + +D YPK I +W+GIPESP+G+F+ + FTYFYKG +YWKFNNQ LKVEP
Sbjct: 1478YRFNEEFRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKVEP 1657
Query: 520 GYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAS-TVKAIAIVIPCILALCLL 578
GYP+S L+D+MGC R EG +V I+I++D S V A A+V+P +L L +L
Sbjct: 1658GYPKSALRDWMGCPS-GGRPDEGTEEETEV-IIIEVDEEGSGAVSAAAVVLPVLLLLLVL 1831
Query: 579 VLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
+ VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1832AVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1918
>gb|AF067419.1|AF067419 Sus scrofa membrane-type 1 matrix metalloproteinase (MT1-MMP) mRNA,
complete cds
Length = 3284
Score = 652 bits (1681), Expect = 0.0
Identities = 312/571 (54%), Positives = 403/571 (69%), Gaps = 2/571 (0%)
Frame = +1
Query: 39 QYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKK 98
Q F+ E WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+ +TGK D +T+ M++
Sbjct: 85 QSFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADADTMKAMRR 264
Query: 99 PRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDV 158
PRCGVPD+ K N+RRKRYA+ G KWQH IT+ I+N TPKVG+ T AIR+AF V
Sbjct: 265 PRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATFEAIRKAFRV 444
Query: 159 WQNVTPLTFEEVPYSELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 217
W++ TPL F EVPY+ + G ++ DI I FA GFHGDS+PFDGEGGFLAHAYFPGP IG
Sbjct: 445 WESATPLRFREVPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIG 624
Query: 218 GDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFK 277
GDTHFDS EPWT+ N + +GND+FLVAVHELGHALGLEHSNDP+AIMAPFYQ+M+T+NF
Sbjct: 625 GDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTENFV 804
Query: 278 LPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXG 337
LP+DD +GIQ++YG SV
Sbjct: 805 LPDDDRRGIQQLYGSESGFPTKMPPQPRTTSKPSVPDKPKNPTYG--------------- 939
Query: 338 AKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 397
PNICDGNF+T+A+LR EMFVFK++WFWRVR N+VMDGYPM I FWRGLP SI+ YE
Sbjct: 940 --PNICDGNFDTVAMLRGEMFVFKERWFWRVRKNQVMDGYPMPIGQFWRGLPASINTAYE 1113
Query: 398 NSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGD 457
DG FVFFKG+K+WVF + +L+PGYP + LG +P ID+A++W GK YFF+G+
Sbjct: 1114RKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRRLPTDKIDAALFWMPNGKDYFFRGN 1293
Query: 458 RYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
+Y+R++EE++ +D YPK I +W+GIPESP+G+F+ + FTYFYKG +YWKFNNQ LKV
Sbjct: 1294KYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKV 1473
Query: 518 EPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAS-TVKAIAIVIPCILALC 576
EPGYP+S L+D+MGC R EG +V I+I++D S V A A+V+P +L L
Sbjct: 1474EPGYPKSALRDWMGCPS-GGRPDEGTEEETEV-IIIEVDEEGSGAVSAAAVVLPVLLLLL 1647
Query: 577 LLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
+L + VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1648VLAVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1740
>gb|AF306662.2|AF306662 Cricetulus griseus matrix metalloprotease MT1-MMP (MMP14) mRNA,
complete cds
Length = 1927
Score = 652 bits (1681), Expect = 0.0
Identities = 313/586 (53%), Positives = 406/586 (68%), Gaps = 1/586 (0%)
Frame = +2
Query: 23 LQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGI 82
L TL L + F+ E WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+
Sbjct: 221 LLTLGSALASLAWAQSSNFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAVAAMQRFYGL 400
Query: 83 NMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPK 142
+TGK D +T+ MK+PRCGVPD+ K N+RRKRYA+ G KWQH IT+ I+N TPK
Sbjct: 401 QVTGKADLDTMKAMKRPRCGVPDKFGTEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPK 580
Query: 143 VGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENG-KRDVDITIIFASGFHGDSSPFDG 201
VG+ T AIR+AF VW++ TPL F EVPY+ + G ++ DI I+FA GFHGDS+PFDG
Sbjct: 581 VGEYATFEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDG 760
Query: 202 EGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPT 261
EGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGLEHSNDP+
Sbjct: 761 EGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNEDLNGNDVFLVAVHELGHALGLEHSNDPS 940
Query: 262 AIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXX 321
AIMAPFYQ+M+T+NF LP+DD +GIQ++YG SV
Sbjct: 941 AIMAPFYQWMDTENFVLPDDDRRGIQQLYGSKSGSPTKMPPQPRTTSWPSVPDKPRNPTY 1120
Query: 322 XXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQI 381
PNICDGNF+T+A+LR EMFVFK++WFWRVRNN+VM GYPM I
Sbjct: 1121G-----------------PNICDGNFDTVAMLRGEMFVFKERWFWRVRNNQVMVGYPMPI 1249
Query: 382 TYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDS 441
FWRGLP S++ YE DG FVFFKG+K+WVF + +L+PGYP + LG G+P ID+
Sbjct: 1250GQFWRGLPASMNTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDA 1429
Query: 442 AIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYF 501
A++W GKTYFF+G++Y+R++EE + +D YPK I +W+GIPESP+G+F+ + FTYF
Sbjct: 1430ALFWMPNGKTYFFRGNKYYRFNEEFRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYF 1609
Query: 502 YKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAST 561
YKG +YWKFNNQ LKVEPGYP+S L+D+MGC R EG +V I+ +
Sbjct: 1610YKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPS-GGRPDEGTEEETEVIIIEVDEEGGGA 1786
Query: 562 VKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
V A A+++P +L + +LV+ VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1787VNAAAVLLPVLLLVLVLVVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1924
>gb|U73940.1|OCU73940 Oryctolagus cuniculus membane-type 1 metalloproteinase precursor
(MMP-14) mRNA, partial cds
Length = 1842
Score = 644 bits (1660), Expect = 0.0
Identities = 310/577 (53%), Positives = 401/577 (68%), Gaps = 2/577 (0%)
Frame = +1
Query: 23 LQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGI 82
L TL L + F+ E WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+
Sbjct: 169 LLTLGTALASLGSAKSNSFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGL 348
Query: 83 NMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPK 142
+TGK D +T+ M++PRCGVPD+ K N+RRKRYA+ G KWQH IT+ I+N TPK
Sbjct: 349 RVTGKADTDTMKAMRRPRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPK 528
Query: 143 VGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGK-RDVDITIIFASGFHGDSSPFDG 201
VG+ T AIR+AF VW++ TPL F EV Y+ + +G+ + DI I FA GFHGDS+PFDG
Sbjct: 529 VGEYATFEAIRKAFRVWESATPLRFREVHYAYIRDGREKQADIMIFFAEGFHGDSTPFDG 708
Query: 202 EGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPT 261
EGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGLEHSNDP+
Sbjct: 709 EGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPS 888
Query: 262 AIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXX 321
AIMAPFYQ+M+T+NF LP+DD +GIQ++YG +
Sbjct: 889 AIMAPFYQWMDTENFVLPDDDRRGIQQLYGSQSGSPTKMPPPPRTTSRTFIPDKPRNPTY 1068
Query: 322 XXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQI 381
PNICDGNF+T+A+LR EMFVFK++WFWRVRNN+VMDGYPM I
Sbjct: 1069G-----------------PNICDGNFDTVAVLRGEMFVFKERWFWRVRNNQVMDGYPMPI 1197
Query: 382 TYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDS 441
FWRGLP SI+ YE DG FVFFKG+K+WVF + +L+PGYP + LG G+P ID+
Sbjct: 1198GQFWRGLPASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDA 1377
Query: 442 AIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYF 501
A++W GKTYFF+G++Y+R++EE++ +D YPK I +W+GIPESP+G+F+ + FTYF
Sbjct: 1378ALFWMPNGKTYFFRGNKYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYF 1557
Query: 502 YKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAS- 560
YKG +YWKFNNQ LKVEPGYP+S L+D+MGC R EG +V I+I++D S
Sbjct: 1558YKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPA-GGRPDEGTEEETEV-IIIEVDEEGSG 1731
Query: 561 TVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHIL 597
V A A+V+P +L L +L + VF F+R GTP+ +L
Sbjct: 1732AVSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPKRLL 1842
>gb|U83918.1|OCU83918 Oryctolagus cuniculus membrane type 1 metalloproteinase mRNA,
complete cds
Length = 1760
Score = 644 bits (1660), Expect = 0.0
Identities = 311/587 (52%), Positives = 406/587 (68%), Gaps = 2/587 (0%)
Frame = +3
Query: 23 LQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGI 82
L TL L + F+ E WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+
Sbjct: 48 LLTLGTALASLGSAQSNSFSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGL 227
Query: 83 NMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPK 142
+TGK D +T+ M++PRCGVPD+ K N+RRKRYA+ G KWQH IT+ I+N TPK
Sbjct: 228 RVTGKADTDTMKAMRRPRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPK 407
Query: 143 VGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGK-RDVDITIIFASGFHGDSSPFDG 201
VG+ T AIR+AF VW++ TPL F EV Y+ + +G+ + DI I FA GFHGDS+PFDG
Sbjct: 408 VGEYATFEAIRKAFRVWESATPLRFREVHYAYIRDGREKQADIMIFFAEGFHGDSTPFDG 587
Query: 202 EGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPT 261
EGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +GND+FLVAVHELGHALGLEHSNDP+
Sbjct: 588 EGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNGNDIFLVAVHELGHALGLEHSNDPS 767
Query: 262 AIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXX 321
AIMAPFYQ+M+T+ F LP+D+ +GIQ++YG +S
Sbjct: 768 AIMAPFYQWMDTEKFLLPDDERRGIQQLYGS-----------------QSGSPTRCLLNP 896
Query: 322 XXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQI 381
P ICDGNF+T+A+ R EMFVFK++WFWRVRNN+VMDGYPM I
Sbjct: 897 GQPSGLLFRISPGNPTYGPKICDGNFDTVAVFRGEMFVFKERWFWRVRNNQVMDGYPMPI 1076
Query: 382 TYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDS 441
WRGLP SI+ YE DG FVFFKG+K+WVF + +L+PGYP + LG G+P ID+
Sbjct: 1077GQLWRGLPASINTAYERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDA 1256
Query: 442 AIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYF 501
A++W GKTYFF+G++Y+R++EE++ +D YPK I +W+GIPESP+G+F+ + FTYF
Sbjct: 1257ALFWMPNGKTYFFRGNKYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYF 1436
Query: 502 YKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAS- 560
YKG +YWKFNNQ LKVEPGYP+S L+D+MGC R EG +V I+I++D S
Sbjct: 1437YKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPA-GGRPDEGTEEETEV-IIIEVDEEGSG 1610
Query: 561 TVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
V A A+V+P +L L +L + VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1611AVSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1751
>ref|NM_008608.1| Mus musculus matrix metalloproteinase 14 (membrane-inserted)
(Mmp14), mRNA
Length = 2488
Score = 641 bits (1653), Expect = 0.0
Identities = 308/569 (54%), Positives = 400/569 (70%), Gaps = 2/569 (0%)
Frame = +2
Query: 41 FNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPR 100
F+ E WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+ +TGK D T+ M++PR
Sbjct: 269 FSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADLATMMAMRRPR 448
Query: 101 CGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQ 160
CGVPD+ K N+RRKRYA+ G KWQH IT+ I+N TPKVG+ T AIR+AF VW+
Sbjct: 449 CGVPDKFGTEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATFEAIRKAFRVWE 628
Query: 161 NVTPLTFEEVPYSELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+ TPL F EVPY+ + G ++ DI I+FA GFHGDS+PFDGEGGFLAHAYFPGP IGGD
Sbjct: 629 SATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGD 808
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
THFDS EPWT+ N + +GND+FLVAVHELGHALGLEHSNDP+ IM+PFYQ+M+T+NF LP
Sbjct: 809 THFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGLEHSNDPSDIMSPFYQWMDTENFVLP 988
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
+DD +GIQ++YG SV
Sbjct: 989 DDDRRGIQQLYGSKSGSPTKMPPQPRTTSRPSVPDKPKNPAYG----------------- 1117
Query: 340 PNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
PNICDGNF+T+A+LR EMFVFK++W WRVRNN+VMDGYPM I FWRGLP SI+ YE
Sbjct: 1118PNICDGNFDTVAMLRGEMFVFKERWLWRVRNNQVMDGYPMPIGQFWRGLPASINTAYERK 1297
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
DG FVFFKG+K+WV + +L+PGY + + L G+P ID+A++W GKTYFF+G++Y
Sbjct: 1298DGTFVFFKGDKHWVCVEASLEPGYANHIKELVRGLPSDKIDTALFWMPNGKTYFFRGNKY 1477
Query: 460 WRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEP 519
+R++EE + +D YPK I +W+GIPESP+G+F+ + FTYFYKG +YWKFNNQ LKVEP
Sbjct: 1478YRFNEEFRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKVEP 1657
Query: 520 GYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAS-TVKAIAIVIPCILALCLL 578
GYP+S L+D+MGC R EG +V I+I++D S V A A+V+P +L L +L
Sbjct: 1658GYPKSALRDWMGCPS-GGRPDEGTEEETEV-IIIEVDEEGSGAVSAAAVVLPVLLLLLVL 1831
Query: 579 VLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
+ VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1832AVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1918
>emb|X83536.2|MMMTMMP Mus musculus mRNA for membrane-type matrix metalloproteinase
Length = 2488
Score = 641 bits (1653), Expect = 0.0
Identities = 308/569 (54%), Positives = 400/569 (70%), Gaps = 2/569 (0%)
Frame = +2
Query: 41 FNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPR 100
F+ E WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+ +TGK D T+ M++PR
Sbjct: 269 FSPEAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADLATMMAMRRPR 448
Query: 101 CGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQ 160
CGVPD+ K N+RRKRYA+ G KWQH IT+ I+N TPKVG+ T AIR+AF VW+
Sbjct: 449 CGVPDKFGTEIKANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATFEAIRKAFRVWE 628
Query: 161 NVTPLTFEEVPYSELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+ TPL F EVPY+ + G ++ DI I+FA GFHGDS+PFDGEGGFLAHAYFPGP IGGD
Sbjct: 629 SATPLRFREVPYAYIREGHEKQADIMILFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGD 808
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
THFDS EPWT+ N + +GND+FLVAVHELGHALGLEHSNDP+ IM+PFYQ+M+T+NF LP
Sbjct: 809 THFDSAEPWTVQNEDLNGNDIFLVAVHELGHALGLEHSNDPSDIMSPFYQWMDTENFVLP 988
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
+DD +GIQ++YG SV
Sbjct: 989 DDDRRGIQQLYGSKSGSPTKMPPQPRTTSRPSVPDKPKNPAYG----------------- 1117
Query: 340 PNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
PNICDGNF+T+A+LR EMFVFK++W WRVRNN+VMDGYPM I FWRGLP SI+ YE
Sbjct: 1118PNICDGNFDTVAMLRGEMFVFKERWLWRVRNNQVMDGYPMPIGQFWRGLPASINTAYERK 1297
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
DG FVFFKG+K+WV + +L+PGY + + L G+P ID+A++W GKTYFF+G++Y
Sbjct: 1298DGTFVFFKGDKHWVCVEASLEPGYANHIKELVRGLPSDKIDTALFWMPNGKTYFFRGNKY 1477
Query: 460 WRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEP 519
+R++EE + +D YPK I +W+GIPESP+G+F+ + FTYFYKG +YWKFNNQ LKVEP
Sbjct: 1478YRFNEEFRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKLKVEP 1657
Query: 520 GYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAS-TVKAIAIVIPCILALCLL 578
GYP+S L+D+MGC R EG +V I+I++D S V A A+V+P +L L +L
Sbjct: 1658GYPKSALRDWMGCPS-GGRPDEGTEEETEV-IIIEVDEEGSGAVSAAAVVLPVLLLLLVL 1831
Query: 579 VLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
+ VF F+R GTP+ +LYC+RS+ + V
Sbjct: 1832AVGLAVFFFRRHGTPKRLLYCQRSLLDKV 1918
>dbj|AB047650.1|AB047650 Oryzias latipes MT5-MMP-del mRNA for membrane type-5 matrix
metalloproteinase-variant, complete cds
Length = 1721
Score = 619 bits (1595), Expect = e-175
Identities = 288/454 (63%), Positives = 341/454 (74%), Gaps = 1/454 (0%)
Frame = +2
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
+ WL+ YGYL P + + S L + M SALAAMQ+FYGI +TG +D T+ WM PRCG
Sbjct: 182 IPTWLRNYGYLRPHNNQTSDLEQEKAMHSALAAMQRFYGIPVTGILDETTMQWMWTPRCG 361
Query: 103 VPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNV 162
VPDQ S + R KRYALTGQKW+ K I+YSI N TPKVG +T+RAIR+AF VWQ V
Sbjct: 362 VPDQPHTSRRQ--RNKRYALTGQKWREKKISYSISNYTPKVGQKDTQRAIRQAFSVWQMV 535
Query: 163 TPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPL+F+EVPYSE++ ++ DI I FASGFHGDSSPFDGEGGFLAHAYFPG GIGGDTHF
Sbjct: 536 TPLSFQEVPYSEIKKEGKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGAGIGGDTHF 715
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDD 282
DSDEPWTLGNP+ DGNDLFLVAVHELGHALGLEHSNDP+AIMAPFYQYM+T +F+LP DD
Sbjct: 716 DSDEPWTLGNPSSDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMDTRDFQLPLDD 895
Query: 283 LQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXG-AKPN 341
LQGIQKIYG R+ G KPN
Sbjct: 896 LQGIQKIYGVPTAMLEPTRPLPTLPSRRTHSTSDRKHDRNSRPARPHSDRPALPGNGKPN 1075
Query: 342 ICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDG 401
+CDGNFNT+A RREMFVFKD+WFWR+RNN+V +GYPMQI FW+GLPP IDA YE SDG
Sbjct: 1076VCDGNFNTVAFFRREMFVFKDRWFWRLRNNKVQEGYPMQIDQFWKGLPPRIDAAYERSDG 1255
Query: 402 NFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWR 461
FVFFKG+K+WVFK+ + +PGYP L+ LG +P GID+A+ WE VGKTYFFKGD+YWR
Sbjct: 1256KFVFFKGDKFWVFKEVSAEPGYPQSLLELGRSLPKEGIDTALRWEPVGKTYFFKGDQYWR 1435
Query: 462 YSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKE 495
Y+EE T+DPGYPKPI++WKGIPE+PQGAF++++
Sbjct: 1436YNEERSTVDPGYPKPISVWKGIPEAPQGAFINRD 1537
Score = 48.5 bits (114), Expect = 0.002
Identities = 26/77 (33%), Positives = 39/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 452 YFFKGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKF 510
+ FK +WR + GYP I WKG+P A+ + F +F KG ++W F
Sbjct: 1124 FVFKDRWFWRLRNNK--VQEGYPMQIDQFWKGLPPRIDAAYERSDGKFVFF-KGDKFWVF 1294
Query: 511 NNQILKVEPGYPRSILK 527
+ EPGYP+S+L+
Sbjct: 1295 KE--VSAEPGYPQSLLE 1339
>ref|NM_008609.1| Mus musculus matrix metalloproteinase 15 (Mmp15), mRNA
Length = 3339
Score = 346 bits (887), Expect = 4e-93
Identities = 153/295 (51%), Positives = 204/295 (68%), Gaps = 27/295 (9%)
Frame = +2
Query: 340 PNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
PNICDGNF+T+A+LR EMFVFK +WFWRVR+NRV+D YPM I +FWRGLP +I A YE
Sbjct: 1115 PNICDGNFDTVAVLRGEMFVFKGRWFWRVRHNRVLDNYPMPIGHFWRGLPGNISAAYERQ 1294
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
DG+FVFFKGN+YW+F++ L+PGYP L + G IP ID+AIWWE G T+FF+ DRY
Sbjct: 1295 DGHFVFFKGNRYWLFREANLEPGYPQPLSSYGTDIPYDRIDTAIWWEPTGHTFFFQADRY 1474
Query: 460 WRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEP 519
WR++EE + DPGYPKPI++W+GIP SP+GAF+ + +TYFYKG +YWKFNN+ L++EP
Sbjct: 1475 WRFNEETQHGDPGYPKPISVWQGIPTSPKGAFLSNDAAYTYFYKGTKYWKFNNERLRMEP 1654
Query: 520 GYPRSILKDFMGCD-------------GPTDRDKEGLSPPDDVD--------------IV 552
G+P+SIL+DFMGC P G P D D +V
Sbjct: 1655 GHPKSILRDFMGCQEHVEPRSRWPDVARPPFNPNGGAEPEADGDSKEENAGDKDEGSRVV 1834
Query: 553 IKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
++++ TV + +++P +L LC+L L + + Q +RKG PR +LYCKRS+QEWV
Sbjct: 1835 VQMEEVVRTVNVVMVLVPLLLLLCILGLAFALVQMQRKGAPRMLLYCKRSLQEWV 1999
Score = 333 bits (855), Expect = 2e-89
Identities = 157/256 (61%), Positives = 196/256 (76%), Gaps = 3/256 (1%)
Frame = +2
Query: 39 QYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKK 98
+ + E WL+ YGYLP MS +RSA+ + SALA MQ FYGI +TG +D T WMK+
Sbjct: 161 EVYAAENWLRLYGYLPQPSRHMSTMRSAQILASALAEMQSFYGIPVTGVLDEETKTWMKR 340
Query: 99 PRCGVPDQTRGSSKFNIRR--KRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAF 156
PRCGVPDQ K N+RR KRY LTG+ W + H+T+SI+N T K+G + A+RRAF
Sbjct: 341 PRCGVPDQFGVHVKANLRRRRKRYTLTGKAWNNYHLTFSIQNYTEKLGWYNSMEAVRRAF 520
Query: 157 DVWQNVTPLTFEEVPYSELENGKR-DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG 215
VW+ VTPL F+EV Y ++ +R + DI ++FASGFHGDSSPFDG GGFLAHAYFPGPG
Sbjct: 521 QVWEQVTPLVFQEVSYDDIRLRRRAEADIMVLFASGFHGDSSPFDGVGGFLAHAYFPGPG 700
Query: 216 IGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN 275
+GGDTHFD+DEPWT + + G LFLVAVHELGHALGLEHS++P+AIMAPFYQ+M+TDN
Sbjct: 701 LGGDTHFDADEPWTFSSTDLHGISLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDTDN 880
Query: 276 FKLPNDDLQGIQKIYG 291
F+LP DDL+GIQ++YG
Sbjct: 881 FQLPEDDLRGIQQLYG 928
>dbj|D86332.1|D86332 Mus musculus mRNA for membrane type-2 matrix metalloproteinase,
complete cds
Length = 3339
Score = 346 bits (887), Expect = 4e-93
Identities = 153/295 (51%), Positives = 204/295 (68%), Gaps = 27/295 (9%)
Frame = +2
Query: 340 PNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
PNICDGNF+T+A+LR EMFVFK +WFWRVR+NRV+D YPM I +FWRGLP +I A YE
Sbjct: 1115 PNICDGNFDTVAVLRGEMFVFKGRWFWRVRHNRVLDNYPMPIGHFWRGLPGNISAAYERQ 1294
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
DG+FVFFKGN+YW+F++ L+PGYP L + G IP ID+AIWWE G T+FF+ DRY
Sbjct: 1295 DGHFVFFKGNRYWLFREANLEPGYPQPLSSYGTDIPYDRIDTAIWWEPTGHTFFFQADRY 1474
Query: 460 WRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEP 519
WR++EE + DPGYPKPI++W+GIP SP+GAF+ + +TYFYKG +YWKFNN+ L++EP
Sbjct: 1475 WRFNEETQHGDPGYPKPISVWQGIPTSPKGAFLSNDAAYTYFYKGTKYWKFNNERLRMEP 1654
Query: 520 GYPRSILKDFMGCD-------------GPTDRDKEGLSPPDDVD--------------IV 552
G+P+SIL+DFMGC P G P D D +V
Sbjct: 1655 GHPKSILRDFMGCQEHVEPRSRWPDVARPPFNPNGGAEPEADGDSKEENAGDKDEGSRVV 1834
Query: 553 IKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
++++ TV + +++P +L LC+L L + + Q +RKG PR +LYCKRS+QEWV
Sbjct: 1835 VQMEEVVRTVNVVMVLVPLLLLLCILGLAFALVQMQRKGAPRMLLYCKRSLQEWV 1999
Score = 333 bits (855), Expect = 2e-89
Identities = 157/256 (61%), Positives = 196/256 (76%), Gaps = 3/256 (1%)
Frame = +2
Query: 39 QYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKK 98
+ + E WL+ YGYLP MS +RSA+ + SALA MQ FYGI +TG +D T WMK+
Sbjct: 161 EVYAAENWLRLYGYLPQPSRHMSTMRSAQILASALAEMQSFYGIPVTGVLDEETKTWMKR 340
Query: 99 PRCGVPDQTRGSSKFNIRR--KRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAF 156
PRCGVPDQ K N+RR KRY LTG+ W + H+T+SI+N T K+G + A+RRAF
Sbjct: 341 PRCGVPDQFGVHVKANLRRRRKRYTLTGKAWNNYHLTFSIQNYTEKLGWYNSMEAVRRAF 520
Query: 157 DVWQNVTPLTFEEVPYSELENGKR-DVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG 215
VW+ VTPL F+EV Y ++ +R + DI ++FASGFHGDSSPFDG GGFLAHAYFPGPG
Sbjct: 521 QVWEQVTPLVFQEVSYDDIRLRRRAEADIMVLFASGFHGDSSPFDGVGGFLAHAYFPGPG 700
Query: 216 IGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN 275
+GGDTHFD+DEPWT + + G LFLVAVHELGHALGLEHS++P+AIMAPFYQ+M+TDN
Sbjct: 701 LGGDTHFDADEPWTFSSTDLHGISLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDTDN 880
Query: 276 FKLPNDDLQGIQKIYG 291
F+LP DDL+GIQ++YG
Sbjct: 881 FQLPEDDLRGIQQLYG 928
>emb|AJ010731.1|MAJ10731 Mus musculus mRNA for membrane-type-4 matrix metalloproteinase
(MT4-MMP)
Length = 1987
Score = 345 bits (884), Expect = 1e-92
Identities = 198/545 (36%), Positives = 280/545 (51%), Gaps = 11/545 (2%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL ++GYLPP DP L++ E + A+ AMQQF G+ TG +D T+ MK PRC +PD
Sbjct: 243 WLSRFGYLPPADPASGQLQTQEELSKAITAMQQFGGLETTGILDEATLALMKTPRCSLPD 422
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVT--PKVGDPETRRAIRRAFDVWQNVT 163
G+ RRKR KW +++++ ++ +G R + A VW ++T
Sbjct: 423 LPPGAQS---RRKRQTPPPTKWSKRNLSWRVRTFPRDSPLGRDTVRALMYYALKVWSDIT 593
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
PL F EV + DI I F+ H D PFDG GG +AHA+FPG GDTHF
Sbjct: 594 PLNFHEVAGNA-------ADIQIDFSKADHNDGYPFDGPGGTVAHAFFPGDHHTAGDTHF 752
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD--NFKLPN 280
D DEPWT + + G DLF VAVHE GHA+GL H P++IM P+YQ D + LP
Sbjct: 753 DDDEPWTFRSSDAHGMDLFAVAVHEFGHAIGLSHVAAPSSIMQPYYQGPVGDPLRYGLPY 932
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
+D + ++YG + P
Sbjct: 933 EDRVRVWQLYGVRESVSPTAQLDTPEPEEPPLLPEPPNNRSSTPPQKDV----------P 1082
Query: 341 NICDGNFNTLAILRREMFVFKDQWFWRV-RNNRVMDGYPMQITYFWRGLP---PSIDAVY 396
+ C +F+ +A +R E F FK ++FWR+ R+ ++ P Q+ FWRGLP S+DAVY
Sbjct: 1083HRCTAHFDAVAQIRGEAFFFKGKYFWRLTRDRHLVSLQPAQMHRFWRGLPLHLDSVDAVY 1262
Query: 397 E-NSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFK 455
E SD VFFKG++YWVFKD ++ GYP + +PP GID+ W +TYFFK
Sbjct: 1263ERTSDHKIVFFKGDRYWVFKDNNVEEGYPRPVSDF--SLPPGGIDAVFSWAHNDRTYFFK 1436
Query: 456 GDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQIL 515
YWRY + + MDPGYP +W+G+P A + +G +YF++G+EYWK + L
Sbjct: 1437DQLYWRYDDHTRRMDPGYPAQGPLWRGVPSMLDDA-MRWSDGASYFFRGQEYWKVLDGEL 1613
Query: 516 KVEPGYPRSILKDFMGCDGP-TDRDKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILA 574
+ PGYP+S +D++ C P D + G P L + T A + +P +L
Sbjct: 1614EAAPGYPQSTARDWLVCGEPLADAEDVGPGPQGRSGAQDGLAVCSCTSDAHRLALPSLLL 1793
Query: 575 LCLLV 579
L L+
Sbjct: 1794LTPLL 1808
>ref|NM_011846.1| Mus musculus matrix metalloproteinase 17 (Mmp17), mRNA
Length = 3490
Score = 345 bits (884), Expect = 1e-92
Identities = 198/545 (36%), Positives = 280/545 (51%), Gaps = 11/545 (2%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL ++GYLPP DP L++ E + A+ AMQQF G+ TG +D T+ MK PRC +PD
Sbjct: 245 WLSRFGYLPPADPASGQLQTQEELSKAITAMQQFGGLETTGILDEATLALMKTPRCSLPD 424
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVT--PKVGDPETRRAIRRAFDVWQNVT 163
G+ RRKR KW +++++ ++ +G R + A VW ++T
Sbjct: 425 LPPGAQS---RRKRQTPPPTKWSKRNLSWRVRTFPRDSPLGRDTVRALMYYALKVWSDIT 595
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
PL F EV + DI I F+ H D PFDG GG +AHA+FPG GDTHF
Sbjct: 596 PLNFHEVAGNA-------ADIQIDFSKADHNDGYPFDGPGGTVAHAFFPGDHHTAGDTHF 754
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD--NFKLPN 280
D DEPWT + + G DLF VAVHE GHA+GL H P++IM P+YQ D + LP
Sbjct: 755 DDDEPWTFRSSDAHGMDLFAVAVHEFGHAIGLSHVAAPSSIMQPYYQGPVGDPVRYGLPY 934
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
+D + ++YG + P
Sbjct: 935 EDRVRVWQLYGVRESVSPTAQLDTPEPEEPPLLPEPPNNRSSTPPQKDV----------P 1084
Query: 341 NICDGNFNTLAILRREMFVFKDQWFWRV-RNNRVMDGYPMQITYFWRGLP---PSIDAVY 396
+ C +F+ +A +R E F FK ++FWR+ R+ ++ P Q+ FWRGLP S+DAVY
Sbjct: 1085HRCTAHFDAVAQIRGEAFFFKGKYFWRLTRDRHLVSLQPAQMHRFWRGLPLHLDSVDAVY 1264
Query: 397 E-NSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFK 455
E SD VFFKG++YWVFKD ++ GYP + +PP GID+ W +TYFFK
Sbjct: 1265ERTSDHKIVFFKGDRYWVFKDNNVEEGYPRPVSDF--SLPPGGIDAVFSWAHNDRTYFFK 1438
Query: 456 GDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQIL 515
YWRY + + MDPGYP +W+G+P A + +G +YF++G+EYWK + L
Sbjct: 1439DQLYWRYDDHTRRMDPGYPAQGPLWRGVPSMLDDA-MRWSDGASYFFRGQEYWKVLDGEL 1615
Query: 516 KVEPGYPRSILKDFMGCDGP-TDRDKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILA 574
+ PGYP+S +D++ C P D + G P L + T A + +P +L
Sbjct: 1616EAAPGYPQSTARDWLVCGEPLADAEDVGPGPQGRSGAQDGLAVCSCTSDAHRLALPSLLL 1795
Query: 575 LCLLV 579
L L+
Sbjct: 1796LTPLL 1810
>dbj|AB021224.1|AB021224 Mus musculus mRNA for membrane-type-4 matrix metalloproteinase,
complete cds
Length = 3490
Score = 345 bits (884), Expect = 1e-92
Identities = 198/545 (36%), Positives = 280/545 (51%), Gaps = 11/545 (2%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL ++GYLPP DP L++ E + A+ AMQQF G+ TG +D T+ MK PRC +PD
Sbjct: 245 WLSRFGYLPPADPASGQLQTQEELSKAITAMQQFGGLETTGILDEATLALMKTPRCSLPD 424
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVT--PKVGDPETRRAIRRAFDVWQNVT 163
G+ RRKR KW +++++ ++ +G R + A VW ++T
Sbjct: 425 LPPGAQS---RRKRQTPPPTKWSKRNLSWRVRTFPRDSPLGRDTVRALMYYALKVWSDIT 595
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
PL F EV + DI I F+ H D PFDG GG +AHA+FPG GDTHF
Sbjct: 596 PLNFHEVAGNA-------ADIQIDFSKADHNDGYPFDGPGGTVAHAFFPGDHHTAGDTHF 754
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD--NFKLPN 280
D DEPWT + + G DLF VAVHE GHA+GL H P++IM P+YQ D + LP
Sbjct: 755 DDDEPWTFRSSDAHGMDLFAVAVHEFGHAIGLSHVAAPSSIMQPYYQGPVGDPVRYGLPY 934
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
+D + ++YG + P
Sbjct: 935 EDRVRVWQLYGVRESVSPTAQLDTPEPEEPPLLPEPPNNRSSTPPQKDV----------P 1084
Query: 341 NICDGNFNTLAILRREMFVFKDQWFWRV-RNNRVMDGYPMQITYFWRGLP---PSIDAVY 396
+ C +F+ +A +R E F FK ++FWR+ R+ ++ P Q+ FWRGLP S+DAVY
Sbjct: 1085HRCTAHFDAVAQIRGEAFFFKGKYFWRLTRDRHLVSLQPAQMHRFWRGLPLHLDSVDAVY 1264
Query: 397 E-NSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFK 455
E SD VFFKG++YWVFKD ++ GYP + +PP GID+ W +TYFFK
Sbjct: 1265ERTSDHKIVFFKGDRYWVFKDNNVEEGYPRPVSDF--SLPPGGIDAVFSWAHNDRTYFFK 1438
Query: 456 GDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQIL 515
YWRY + + MDPGYP +W+G+P A + +G +YF++G+EYWK + L
Sbjct: 1439DQLYWRYDDHTRRMDPGYPAQGPLWRGVPSMLDDA-MRWSDGASYFFRGQEYWKVLDGEL 1615
Query: 516 KVEPGYPRSILKDFMGCDGP-TDRDKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCILA 574
+ PGYP+S +D++ C P D + G P L + T A + +P +L
Sbjct: 1616EAAPGYPQSTARDWLVCGEPLADAEDVGPGPQGRSGAQDGLAVCSCTSDAHRLALPSLLL 1795
Query: 575 LCLLV 579
L L+
Sbjct: 1796LTPLL 1810
>gb|BC006412.1|BC006412 Homo sapiens, matrix metalloproteinase 15 (membrane-inserted),
clone MGC:10773 IMAGE:3607064, mRNA, complete cds
Length = 3458
Score = 343 bits (879), Expect = 4e-92
Identities = 163/272 (59%), Positives = 204/272 (74%), Gaps = 3/272 (1%)
Frame = +2
Query: 23 LQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGI 82
L LL L V + + E WL+ YGYLP MS +RSA+ + SALA MQ+FYGI
Sbjct: 2 LLVLLGCLGLGVAAEDAEVHAENWLRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGI 181
Query: 83 NMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRR--KRYALTGQKWQHKHITYSIKNVT 140
+TG +D T +WMK+PRCGVPDQ K N+RR KRYALTG+KW + H+T+SI+N T
Sbjct: 182 PVTGVLDEETKEWMKRPRCGVPDQFGVRVKANLRRRRKRYALTGRKWNNHHLTFSIQNYT 361
Query: 141 PKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELE-NGKRDVDITIIFASGFHGDSSPF 199
K+G + A+RRAF VW+ TPL F+EVPY ++ +++ DI ++FASGFHGDSSPF
Sbjct: 362 EKLGWYHSMEAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPF 541
Query: 200 DGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSND 259
DG GGFLAHAYFPGPG+GGDTHFD+DEPWT + + GN+LFLVAVHELGHALGLEHS++
Sbjct: 542 DGTGGFLAHAYFPGPGLGGDTHFDADEPWTFSSTDLHGNNLFLVAVHELGHALGLEHSSN 721
Query: 260 PTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
P AIMAPFYQ+ + DNFKLP DDL+GIQ++YG
Sbjct: 722 PNAIMAPFYQWKDVDNFKLPEDDLRGIQQLYG 817
Score = 339 bits (869), Expect = 5e-91
Identities = 154/303 (50%), Positives = 207/303 (67%), Gaps = 35/303 (11%)
Frame = +2
Query: 340 PNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
PNICDG+F+T+A+LR EMFVFK +WFWRVR+NRV+D YPM I +FWRGLP I A YE
Sbjct: 1004 PNICDGDFDTVAMLRGEMFVFKGRWFWRVRHNRVLDNYPMPIGHFWRGLPGDISAAYERQ 1183
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
DG FVFFKG++YW+F++ L+PGYP L + G GIP ID+AIWWE G T+FF+ DRY
Sbjct: 1184 DGRFVFFKGDRYWLFREANLEPGYPQPLTSYGLGIPYDRIDTAIWWEPTGHTFFFQEDRY 1363
Query: 460 WRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEP 519
WR++EE + DPGYPKPI++W+GIP SP+GAF+ + +TYFYKG +YWKF+N+ L++EP
Sbjct: 1364 WRFNEETQRGDPGYPKPISVWQGIPASPKGAFLSNDAAYTYFYKGTKYWKFDNERLRMEP 1543
Query: 520 GYPRSILKDFMGCD-----GPT---------------------------DRDKE---GLS 544
GYP+SIL+DFMGC GP D D + G++
Sbjct: 1544 GYPKSILRDFMGCQEHVEPGPRWPDVARPPFNPHGGAEPGADSAEGDVGDGDGDFGAGVN 1723
Query: 545 PPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQ 604
+V++++ A TV + +++P +L LC+L L Y + Q +RKG PR +LYCKRS+Q
Sbjct: 1724 KDRGSRVVVQMEEVARTVNVVMVLVPLLLLLCVLGLTYALVQMQRKGAPRVLLYCKRSLQ 1903
Query: 605 EWV 607
EWV
Sbjct: 1904 EWV 1912
>ref|NM_002428.1| Homo sapiens matrix metalloproteinase 15 (membrane-inserted)
(MMP15), mRNA
Length = 3530
Score = 343 bits (879), Expect = 4e-92
Identities = 163/272 (59%), Positives = 204/272 (74%), Gaps = 3/272 (1%)
Frame = +1
Query: 23 LQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGI 82
L LL L V + + E WL+ YGYLP MS +RSA+ + SALA MQ+FYGI
Sbjct: 145 LLVLLGCLGLGVAAEDAEVHAENWLRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGI 324
Query: 83 NMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRR--KRYALTGQKWQHKHITYSIKNVT 140
+TG +D T +WMK+PRCGVPDQ K N+RR KRYALTG+KW + H+T+SI+N T
Sbjct: 325 PVTGVLDEETKEWMKRPRCGVPDQFGVRVKANLRRRRKRYALTGRKWNNHHLTFSIQNYT 504
Query: 141 PKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELE-NGKRDVDITIIFASGFHGDSSPF 199
K+G + A+RRAF VW+ TPL F+EVPY ++ +++ DI ++FASGFHGDSSPF
Sbjct: 505 EKLGWYHSMEAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPF 684
Query: 200 DGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSND 259
DG GGFLAHAYFPGPG+GGDTHFD+DEPWT + + GN+LFLVAVHELGHALGLEHS++
Sbjct: 685 DGTGGFLAHAYFPGPGLGGDTHFDADEPWTFSSTDLHGNNLFLVAVHELGHALGLEHSSN 864
Query: 260 PTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
P AIMAPFYQ+ + DNFKLP DDL+GIQ++YG
Sbjct: 865 PNAIMAPFYQWKDVDNFKLPEDDLRGIQQLYG 960
Score = 339 bits (870), Expect = 4e-91
Identities = 154/303 (50%), Positives = 207/303 (67%), Gaps = 35/303 (11%)
Frame = +1
Query: 340 PNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
PNICDG+F+T+A+LR EMFVFK +WFWRVR+NRV+D YPM I +FWRGLP I A YE
Sbjct: 1147 PNICDGDFDTVAMLRGEMFVFKGRWFWRVRHNRVLDNYPMPIGHFWRGLPGDISAAYERQ 1326
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
DG FVFFKG++YW+F++ L+PGYP L + G GIP ID+AIWWE G T+FF+ DRY
Sbjct: 1327 DGRFVFFKGDRYWLFREANLEPGYPQPLTSYGLGIPYDRIDTAIWWEPTGHTFFFQEDRY 1506
Query: 460 WRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEP 519
WR++EE + DPGYPKPI++W+GIP SP+GAF+ + +TYFYKG +YWKF+N+ L++EP
Sbjct: 1507 WRFNEETQRGDPGYPKPISVWQGIPASPKGAFLSNDAAYTYFYKGTKYWKFDNERLRMEP 1686
Query: 520 GYPRSILKDFMGCD-----GPT---------------------------DRDKE---GLS 544
GYP+SIL+DFMGC GP D D + G++
Sbjct: 1687 GYPKSILRDFMGCQEHVEPGPRWPDVARPPFNPHGGAEPGADSAEGDVGDGDGDFGAGVN 1866
Query: 545 PPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQ 604
+V++++ A TV + +++P +L LC+L L Y + Q +RKG PR +LYCKRS+Q
Sbjct: 1867 KDGGSRVVVQMEEVARTVNVVMVLVPLLLLLCVLGLTYALVQMQRKGAPRVLLYCKRSLQ 2046
Query: 605 EWV 607
EWV
Sbjct: 2047 EWV 2055
>emb|Z48482.1|HSMMPM2 H.sapiens mRNA for membrane-type matrix metalloproteinase 2
Length = 3530
Score = 343 bits (879), Expect = 4e-92
Identities = 163/272 (59%), Positives = 204/272 (74%), Gaps = 3/272 (1%)
Frame = +1
Query: 23 LQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGI 82
L LL L V + + E WL+ YGYLP MS +RSA+ + SALA MQ+FYGI
Sbjct: 145 LLVLLGCLGLGVAAEDAEVHAENWLRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGI 324
Query: 83 NMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRR--KRYALTGQKWQHKHITYSIKNVT 140
+TG +D T +WMK+PRCGVPDQ K N+RR KRYALTG+KW + H+T+SI+N T
Sbjct: 325 PVTGVLDEETKEWMKRPRCGVPDQFGVRVKANLRRRRKRYALTGRKWNNHHLTFSIQNYT 504
Query: 141 PKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELE-NGKRDVDITIIFASGFHGDSSPF 199
K+G + A+RRAF VW+ TPL F+EVPY ++ +++ DI ++FASGFHGDSSPF
Sbjct: 505 EKLGWYHSMEAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPF 684
Query: 200 DGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSND 259
DG GGFLAHAYFPGPG+GGDTHFD+DEPWT + + GN+LFLVAVHELGHALGLEHS++
Sbjct: 685 DGTGGFLAHAYFPGPGLGGDTHFDADEPWTFSSTDLHGNNLFLVAVHELGHALGLEHSSN 864
Query: 260 PTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
P AIMAPFYQ+ + DNFKLP DDL+GIQ++YG
Sbjct: 865 PNAIMAPFYQWKDVDNFKLPEDDLRGIQQLYG 960
Score = 339 bits (870), Expect = 4e-91
Identities = 154/303 (50%), Positives = 207/303 (67%), Gaps = 35/303 (11%)
Frame = +1
Query: 340 PNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
PNICDG+F+T+A+LR EMFVFK +WFWRVR+NRV+D YPM I +FWRGLP I A YE
Sbjct: 1147 PNICDGDFDTVAMLRGEMFVFKGRWFWRVRHNRVLDNYPMPIGHFWRGLPGDISAAYERQ 1326
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
DG FVFFKG++YW+F++ L+PGYP L + G GIP ID+AIWWE G T+FF+ DRY
Sbjct: 1327 DGRFVFFKGDRYWLFREANLEPGYPQPLTSYGLGIPYDRIDTAIWWEPTGHTFFFQEDRY 1506
Query: 460 WRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEP 519
WR++EE + DPGYPKPI++W+GIP SP+GAF+ + +TYFYKG +YWKF+N+ L++EP
Sbjct: 1507 WRFNEETQRGDPGYPKPISVWQGIPASPKGAFLSNDAAYTYFYKGTKYWKFDNERLRMEP 1686
Query: 520 GYPRSILKDFMGCD-----GPT---------------------------DRDKE---GLS 544
GYP+SIL+DFMGC GP D D + G++
Sbjct: 1687 GYPKSILRDFMGCQEHVEPGPRWPDVARPPFNPHGGAEPGADSAEGDVGDGDGDFGAGVN 1866
Query: 545 PPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQ 604
+V++++ A TV + +++P +L LC+L L Y + Q +RKG PR +LYCKRS+Q
Sbjct: 1867 KDGGSRVVVQMEEVARTVNVVMVLVPLLLLLCVLGLTYALVQMQRKGAPRVLLYCKRSLQ 2046
Query: 605 EWV 607
EWV
Sbjct: 2047 EWV 2055
>dbj|D85510.1|D85510 Homo sapiens mRNA for SMCP-2, partial cds
Length = 2925
Score = 339 bits (870), Expect = 4e-91
Identities = 154/303 (50%), Positives = 207/303 (67%), Gaps = 35/303 (11%)
Frame = +2
Query: 340 PNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
PNICDG+F+T+A+LR EMFVFK +WFWRVR+NRV+D YPM I +FWRGLP I A YE
Sbjct: 614 PNICDGDFDTVAMLRGEMFVFKGRWFWRVRHNRVLDNYPMPIGHFWRGLPGDISAAYERQ 793
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
DG FVFFKG++YW+F++ L+PGYP L + G GIP ID+AIWWE G T+FF+ DRY
Sbjct: 794 DGRFVFFKGDRYWLFREANLEPGYPQPLTSYGLGIPYDRIDTAIWWEPTGHTFFFQEDRY 973
Query: 460 WRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEP 519
WR++EE + DPGYPKPI++W+GIP SP+GAF+ + +TYFYKG +YWKF+N+ L++EP
Sbjct: 974 WRFNEETQRGDPGYPKPISVWQGIPASPKGAFLSNDAAYTYFYKGTKYWKFDNERLRMEP 1153
Query: 520 GYPRSILKDFMGCD-----GPT---------------------------DRDKE---GLS 544
GYP+SIL+DFMGC GP D D + G++
Sbjct: 1154GYPKSILRDFMGCQEHVEPGPRWPDVARPPFNPHGGAEPGADSAEGDVGDGDGDFGAGVN 1333
Query: 545 PPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQ 604
+V++++ A TV + +++P +L LC+L L Y + Q +RKG PR +LYCKRS+Q
Sbjct: 1334KDGGSRVVVQMEEVARTVNVVMVLVPLLLLLCVLGLTYALVQMQRKGAPRVLLYCKRSLQ 1513
Query: 605 EWV 607
EWV
Sbjct: 1514EWV 1522
Score = 224 bits (571), Expect = 2e-56
Identities = 99/142 (69%), Positives = 121/142 (84%), Gaps = 1/142 (0%)
Frame = +2
Query: 151 AIRRAFDVWQNVTPLTFEEVPYSELE-NGKRDVDITIIFASGFHGDSSPFDGEGGFLAHA 209
A+RRAF VW+ TPL F+EVPY ++ +++ DI ++FASGFHGDSSPFDG GGFLAHA
Sbjct: 2 AVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHA 181
Query: 210 YFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ 269
YFPGPG+GGDTHFD+DEPWT + + GN+LFLVAVHELGHALGLEHS++P AIMAPFYQ
Sbjct: 182 YFPGPGLGGDTHFDADEPWTFSSTDLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQ 361
Query: 270 YMETDNFKLPNDDLQGIQKIYG 291
+ + DNFKLP DDL+GIQ++YG
Sbjct: 362 WKDVDNFKLPEDDLRGIQQLYG 427
>dbj|D86331.1|D86331 Human MT2-MMP gene for matrix metalloprotein, complete cds
Length = 1893
Score = 339 bits (869), Expect = 5e-91
Identities = 154/303 (50%), Positives = 207/303 (67%), Gaps = 35/303 (11%)
Frame = +3
Query: 340 PNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
PNICDG+F+T+A+LR EMFVFK +WFWRVR+NRV+D YPM I +FWRGLP I A YE
Sbjct: 822 PNICDGDFDTVAMLRGEMFVFKGRWFWRVRHNRVLDNYPMPIGHFWRGLPGDISAAYERQ 1001
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
DG FVFFKG++YW+F++ L+PGYP L + G GIP ID+AIWWE G T+FF+ DRY
Sbjct: 1002 DGRFVFFKGDRYWLFREANLEPGYPQPLTSYGLGIPYDRIDTAIWWEPTGHTFFFQEDRY 1181
Query: 460 WRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEP 519
WR++EE + DPGYPKPI++W+GIP SP+GAF+ + +TYFYKG +YWKF+N+ L++EP
Sbjct: 1182 WRFNEETQRGDPGYPKPISVWQGIPASPKGAFLSNDAAYTYFYKGTKYWKFDNERLRMEP 1361
Query: 520 GYPRSILKDFMGCD-----GPT---------------------------DRDKE---GLS 544
GYP+SIL+DFMGC GP D D + G++
Sbjct: 1362 GYPKSILRDFMGCQEHVEPGPRWPDVARPPFNPHGGAEPGADSAEGDVGDGDGDFGAGVN 1541
Query: 545 PPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQ 604
+V++++ A TV + +++P +L LC+L L Y + Q +RKG PR +LYCKRS+Q
Sbjct: 1542 KDRGSRVVVQMEEVARTVNVVMVLVPLLLLLCVLGLTYALVQMQRKGAPRVLLYCKRSLQ 1721
Query: 605 EWV 607
EWV
Sbjct: 1722 EWV 1730
Score = 295 bits (756), Expect = 7e-78
Identities = 135/211 (63%), Positives = 169/211 (79%), Gaps = 3/211 (1%)
Frame = +3
Query: 84 MTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRR--KRYALTGQKWQHKHITYSIKNVTP 141
+TG +D T +WMK+PRCGVPDQ K N+RR KRYALTG+KW + H+T+SI+N T
Sbjct: 3 VTGVLDEETKEWMKRPRCGVPDQFGVRVKANLRRRRKRYALTGRKWNNHHLTFSIQNYTE 182
Query: 142 KVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELE-NGKRDVDITIIFASGFHGDSSPFD 200
K+G + A+RRAF VW+ TPL F+EVPY ++ +++ DI ++FASGFHGDSSPFD
Sbjct: 183 KLGWYHSMEAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFD 362
Query: 201 GEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDP 260
G GGFLAHAYFPGPG+GGDTHFD+DEPWT + + GN+LFLVAVHELGHALGLEHS++P
Sbjct: 363 GTGGFLAHAYFPGPGLGGDTHFDADEPWTFSSTDLHGNNLFLVAVHELGHALGLEHSSNP 542
Query: 261 TAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
AIMAPFYQ+ + DNFKLP DDL+GIQ++YG
Sbjct: 543 NAIMAPFYQWKDVDNFKLPEDDLRGIQQLYG 635
>gb|AF185270.1|AF185270 Homo sapiens leukolysin (MMP25) mRNA, complete cds
Length = 2667
Score = 337 bits (865), Expect = 2e-90
Identities = 186/502 (37%), Positives = 269/502 (53%), Gaps = 11/502 (2%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL +YGYLPP P + L+S E ++ A+ MQ+F G+ TG++D T+ M+KPRC +PD
Sbjct: 127 WLTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPD 306
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNV--TPKVGDPETRRAIRRAFDVWQNVT 163
G + RR+RYAL+G W+ + +T+ +++ + ++ R + A W +
Sbjct: 307 -VLGVAGLVRRRRRYALSGSVWKKRTLTWRVRSFPQSSQLSQETVRVLMSYALMAWGMES 483
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
LTF EV + ++ DI I FA FH DS PFDG GG LAHA+FPG I GDTHF
Sbjct: 484 GLTFHEVDSPQ----GQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHF 651
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ--YMETDNFKLPN 280
D +E WT G+ + +G DLF VAVHE GHALGL HS+ P +IM PFYQ + D ++L
Sbjct: 652 DDEETWTFGSKDGEGTDLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGDPDKYRLSQ 831
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD G+Q++YG P
Sbjct: 832 DDRDGLQQLYGKAPQTPYDKPTRKPLAPPPQPPASPTHSPSFPI---------------P 966
Query: 341 NICDGNFNTLAILRREMFVFKDQWFWRVR-NNRVMDGYPMQITYFWRGLPPSIDAVY--- 396
+ C+GNF+ +A +R E F FK WFWR++ + +++ P ++ FW GLP + V
Sbjct: 967 DRCEGNFDAIANIRGETFFFKGPWFWRLQPSGQLVSPRPARLHRFWEGLPAQVRVVQAAY 1146
Query: 397 -ENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP-HGIDSAIWWEDVGKTYFF 454
+ DG + F G ++WVF+D L+ G L L G+PP +D+ W GKTY
Sbjct: 1147ARHRDGRILLFSGPQFWVFQDRQLEGG-ARPLTEL--GLPPGEEVDAVFSWPQNGKTYLV 1317
Query: 455 KGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
+G +YWRY E DPGYP+ +++W+G P SP V G TYF+KG YW+F
Sbjct: 1318RGRQYWRYDEAAARPDPGYPRDLSLWEGAPPSPDDVTV-SNAGDTYFFKGAHYWRFPKNS 1494
Query: 515 LKVEPGYPRSILKDFMGCDGPT 536
+K EP P+ + +++ C P+
Sbjct: 1495IKTEPDAPQPMGPNWLDCPAPS 1560
>gb|AF145442.2|AF145442 Homo sapiens leukolysin mRNA, complete cds
Length = 2667
Score = 337 bits (865), Expect = 2e-90
Identities = 186/502 (37%), Positives = 269/502 (53%), Gaps = 11/502 (2%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL +YGYLPP P + L+S E ++ A+ MQ+F G+ TG++D T+ M+KPRC +PD
Sbjct: 127 WLTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPD 306
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNV--TPKVGDPETRRAIRRAFDVWQNVT 163
G + RR+RYAL+G W+ + +T+ +++ + ++ R + A W +
Sbjct: 307 -VLGVAGLVRRRRRYALSGSVWKKRTLTWRVRSFPQSSQLSQETVRVLMSYALMAWGMES 483
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
LTF EV + ++ DI I FA FH DS PFDG GG LAHA+FPG I GDTHF
Sbjct: 484 GLTFHEVDSPQ----GQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHF 651
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ--YMETDNFKLPN 280
D +E WT G+ + +G DLF VAVHE GHALGL HS+ P +IM PFYQ + D ++L
Sbjct: 652 DDEETWTFGSKDGEGTDLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGDPDKYRLSQ 831
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD G+Q++YG P
Sbjct: 832 DDRDGLQQLYGKAPQTPYDKPTRKPLAPPPQPPASPTHSPSFPI---------------P 966
Query: 341 NICDGNFNTLAILRREMFVFKDQWFWRVR-NNRVMDGYPMQITYFWRGLPPSIDAVY--- 396
+ C+GNF+ +A +R E F FK WFWR++ + +++ P ++ FW GLP + V
Sbjct: 967 DRCEGNFDAIANIRGETFFFKGPWFWRLQPSGQLVSPRPARLHRFWEGLPAQVRVVQAAY 1146
Query: 397 -ENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP-HGIDSAIWWEDVGKTYFF 454
+ DG + F G ++WVF+D L+ G L L G+PP +D+ W GKTY
Sbjct: 1147ARHRDGRILLFSGPQFWVFQDRQLEGG-ARPLTEL--GLPPGEEVDAVFSWPQNGKTYLV 1317
Query: 455 KGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
+G +YWRY E DPGYP+ +++W+G P SP V G TYF+KG YW+F
Sbjct: 1318RGRQYWRYDEAAARPDPGYPRDLSLWEGAPPSPDDVTV-SNAGDTYFFKGAHYWRFPKNS 1494
Query: 515 LKVEPGYPRSILKDFMGCDGPT 536
+K EP P+ + +++ C P+
Sbjct: 1495IKTEPDAPQPMGPNWLDCPAPS 1560
>ref|NM_022468.2| Homo sapiens matrix metalloproteinase 25 (MMP25), transcript
variant 1, mRNA
Length = 3557
Score = 337 bits (865), Expect = 2e-90
Identities = 186/502 (37%), Positives = 269/502 (53%), Gaps = 11/502 (2%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL +YGYLPP P + L+S E ++ A+ MQ+F G+ TG++D T+ M+KPRC +PD
Sbjct: 340 WLTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPD 519
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNV--TPKVGDPETRRAIRRAFDVWQNVT 163
G + RR+RYAL+G W+ + +T+ +++ + ++ R + A W +
Sbjct: 520 -VLGVAGLVRRRRRYALSGSVWKKRTLTWRVRSFPQSSQLSQETVRVLMSYALMAWGMES 696
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
LTF EV + ++ DI I FA FH DS PFDG GG LAHA+FPG I GDTHF
Sbjct: 697 GLTFHEVDSPQ----GQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHF 864
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ--YMETDNFKLPN 280
D +E WT G+ + +G DLF VAVHE GHALGL HS+ P +IM PFYQ + D ++L
Sbjct: 865 DDEETWTFGSKDGEGTDLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGDPDKYRLSQ 1044
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD G+Q++YG P
Sbjct: 1045DDRDGLQQLYGKAPQTPYDKPTRKPLAPPPQPPASPTHSPSFPI---------------P 1179
Query: 341 NICDGNFNTLAILRREMFVFKDQWFWRVR-NNRVMDGYPMQITYFWRGLPPSIDAVY--- 396
+ C+GNF+ +A +R E F FK WFWR++ + +++ P ++ FW GLP + V
Sbjct: 1180DRCEGNFDAIANIRGETFFFKGPWFWRLQPSGQLVSPRPARLHRFWEGLPAQVRVVQAAY 1359
Query: 397 -ENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP-HGIDSAIWWEDVGKTYFF 454
+ DG + F G ++WVF+D L+ G L L G+PP +D+ W GKTY
Sbjct: 1360ARHRDGRILLFSGPQFWVFQDRQLEGG-ARPLTEL--GLPPGEEVDAVFSWPQNGKTYLV 1530
Query: 455 KGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
+G +YWRY E DPGYP+ +++W+G P SP V G TYF+KG YW+F
Sbjct: 1531RGRQYWRYDEAAARPDPGYPRDLSLWEGAPPSPDDVTV-SNAGDTYFFKGAHYWRFPKNS 1707
Query: 515 LKVEPGYPRSILKDFMGCDGPT 536
+K EP P+ + +++ C P+
Sbjct: 1708IKTEPDAPQPMGPNWLDCPAPS 1773
>emb|AJ272137.1|HSA272137 Homo sapiens mRNA for membrane type matrix metalloproteinase number
6, (MT6-MMP gene)
Length = 3586
Score = 337 bits (865), Expect = 2e-90
Identities = 186/502 (37%), Positives = 269/502 (53%), Gaps = 11/502 (2%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL +YGYLPP P + L+S E ++ A+ MQ+F G+ TG++D T+ M+KPRC +PD
Sbjct: 340 WLTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPD 519
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNV--TPKVGDPETRRAIRRAFDVWQNVT 163
G + RR+RYAL+G W+ + +T+ +++ + ++ R + A W +
Sbjct: 520 -VLGVAGLVRRRRRYALSGSVWKKRTLTWRVRSFPQSSQLSQETVRVLMSYALMAWGMES 696
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
LTF EV + ++ DI I FA FH DS PFDG GG LAHA+FPG I GDTHF
Sbjct: 697 GLTFHEVDSPQ----GQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHF 864
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ--YMETDNFKLPN 280
D +E WT G+ + +G DLF VAVHE GHALGL HS+ P +IM PFYQ + D ++L
Sbjct: 865 DDEETWTFGSKDGEGTDLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGDPDKYRLSQ 1044
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD G+Q++YG P
Sbjct: 1045DDRDGLQQLYGKAPQTPYDKPTRKPLAPPPQPPASPTHSPSFPI---------------P 1179
Query: 341 NICDGNFNTLAILRREMFVFKDQWFWRVR-NNRVMDGYPMQITYFWRGLPPSIDAVY--- 396
+ C+GNF+ +A +R E F FK WFWR++ + +++ P ++ FW GLP + V
Sbjct: 1180DRCEGNFDAIANIRGETFFFKGPWFWRLQPSGQLVSPRPARLHRFWEGLPAQVRVVQAAY 1359
Query: 397 -ENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP-HGIDSAIWWEDVGKTYFF 454
+ DG + F G ++WVF+D L+ G L L G+PP +D+ W GKTY
Sbjct: 1360ARHRDGRILLFSGPQFWVFQDRQLEGG-ARPLTEL--GLPPGEEVDAVFSWPQNGKTYLV 1530
Query: 455 KGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
+G +YWRY E DPGYP+ +++W+G P SP V G TYF+KG YW+F
Sbjct: 1531RGRQYWRYDEAAARPDPGYPRDLSLWEGAPPSPDDVTV-SNAGDTYFFKGAHYWRFPKNS 1707
Query: 515 LKVEPGYPRSILKDFMGCDGPT 536
+K EP P+ + +++ C P+
Sbjct: 1708IKTEPDAPQPMGPNWLDCPAPS 1773
>emb|AJ239053.1|HSA239053 Homo sapiens mRNA for matrix metalloproteinase-25 (MMP-25)
Length = 2917
Score = 337 bits (865), Expect = 2e-90
Identities = 186/502 (37%), Positives = 269/502 (53%), Gaps = 11/502 (2%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL +YGYLPP P + L+S E ++ A+ MQ+F G+ TG++D T+ M+KPRC +PD
Sbjct: 284 WLTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPD 463
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNV--TPKVGDPETRRAIRRAFDVWQNVT 163
G + RR+RYAL+G W+ + +T+ +++ + ++ R + A W +
Sbjct: 464 -VLGVAGLVRRRRRYALSGSVWKKRTLTWRVRSFPQSSQLSQETVRVLMSYALMAWGMES 640
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
LTF EV + ++ DI I FA FH DS PFDG GG LAHA+FPG I GDTHF
Sbjct: 641 GLTFHEVDSPQ----GQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHF 808
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ--YMETDNFKLPN 280
D +E WT G+ + +G DLF VAVHE GHALGL HS+ P +IM PFYQ + D ++L
Sbjct: 809 DDEETWTFGSKDGEGTDLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGDPDKYRLSQ 988
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD G+Q++YG P
Sbjct: 989 DDRDGLQQLYGKAPQTPYDKPTRKPLAPPPQPPASPTHSPSFPI---------------P 1123
Query: 341 NICDGNFNTLAILRREMFVFKDQWFWRVR-NNRVMDGYPMQITYFWRGLPPSIDAVY--- 396
+ C+GNF+ +A +R E F FK WFWR++ + +++ P ++ FW GLP + V
Sbjct: 1124DRCEGNFDAIANIRGETFFFKGPWFWRLQPSGQLVSPRPARLHRFWEGLPAQVRVVQAAY 1303
Query: 397 -ENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP-HGIDSAIWWEDVGKTYFF 454
+ DG + F G ++WVF+D L+ G L L G+PP +D+ W GKTY
Sbjct: 1304ARHRDGRILLFSGPQFWVFQDRQLEGG-ARPLTEL--GLPPGEEVDAVFSWPQNGKTYLV 1474
Query: 455 KGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
+G +YWRY E DPGYP+ +++W+G P SP V G TYF+KG YW+F
Sbjct: 1475RGRQYWRYDEAAARPDPGYPRDLSLWEGAPPSPDDVTV-SNAGDTYFFKGAHYWRFPKNS 1651
Query: 515 LKVEPGYPRSILKDFMGCDGPT 536
+K EP P+ + +++ C P+
Sbjct: 1652IKTEPDAPQPMGPNWLDCPAPS 1717
>ref|NM_022718.1| Homo sapiens matrix metalloproteinase 25 (MMP25), transcript
variant 2, mRNA
Length = 2973
Score = 337 bits (865), Expect = 2e-90
Identities = 186/502 (37%), Positives = 269/502 (53%), Gaps = 11/502 (2%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL +YGYLPP P + L+S E ++ A+ MQ+F G+ TG++D T+ M+KPRC +PD
Sbjct: 340 WLTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPD 519
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNV--TPKVGDPETRRAIRRAFDVWQNVT 163
G + RR+RYAL+G W+ + +T+ +++ + ++ R + A W +
Sbjct: 520 -VLGVAGLVRRRRRYALSGSVWKKRTLTWRVRSFPQSSQLSQETVRVLMSYALMAWGMES 696
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
LTF EV + ++ DI I FA FH DS PFDG GG LAHA+FPG I GDTHF
Sbjct: 697 GLTFHEVDSPQ----GQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHF 864
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ--YMETDNFKLPN 280
D +E WT G+ + +G DLF VAVHE GHALGL HS+ P +IM PFYQ + D ++L
Sbjct: 865 DDEETWTFGSKDGEGTDLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGDPDKYRLSQ 1044
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD G+Q++YG P
Sbjct: 1045DDRDGLQQLYGKAPQTPYDKPTRKPLAPPPQPPASPTHSPSFPI---------------P 1179
Query: 341 NICDGNFNTLAILRREMFVFKDQWFWRVR-NNRVMDGYPMQITYFWRGLPPSIDAVY--- 396
+ C+GNF+ +A +R E F FK WFWR++ + +++ P ++ FW GLP + V
Sbjct: 1180DRCEGNFDAIANIRGETFFFKGPWFWRLQPSGQLVSPRPARLHRFWEGLPAQVRVVQAAY 1359
Query: 397 -ENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP-HGIDSAIWWEDVGKTYFF 454
+ DG + F G ++WVF+D L+ G L L G+PP +D+ W GKTY
Sbjct: 1360ARHRDGRILLFSGPQFWVFQDRQLEGG-ARPLTEL--GLPPGEEVDAVFSWPQNGKTYLV 1530
Query: 455 KGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
+G +YWRY E DPGYP+ +++W+G P SP V G TYF+KG YW+F
Sbjct: 1531RGRQYWRYDEAAARPDPGYPRDLSLWEGAPPSPDDVTV-SNAGDTYFFKGAHYWRFPKNS 1707
Query: 515 LKVEPGYPRSILKDFMGCDGPT 536
+K EP P+ + +++ C P+
Sbjct: 1708IKTEPDAPQPMGPNWLDCPAPS 1773
>gb|AF267160.1|AF267160 Ovis aries membrane type-1 metalloproteinase mRNA, partial cds
Length = 788
Score = 337 bits (864), Expect = 2e-90
Identities = 159/277 (57%), Positives = 194/277 (69%), Gaps = 1/277 (0%)
Frame = +1
Query: 170 VPYSELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPW 228
VPY+ + G ++ DI I FA GFHGDS+PFDGEGGFLAHAYFPGP IGGDTHFDS EPW
Sbjct: 1 VPYAYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPW 180
Query: 229 TLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQK 288
T+ N + +GND+FLVAVHELGHALGLEHSNDP+AIMAPFYQ+M+T+NF LP+DD +GIQ+
Sbjct: 181 TVRNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTENFVLPDDDRRGIQQ 360
Query: 289 IYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFN 348
+YG S+ PNICDGNF+
Sbjct: 361 LYGSKSGSPTKIPPQPRTTSRPSIPDKPKNPTYG-----------------PNICDGNFD 489
Query: 349 TLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKG 408
T+A+LR EMFVFK++WFWRVR N+VMDGYPM I FWRGLP SI+ YE DG FVFFKG
Sbjct: 490 TVAMLRGEMFVFKERWFWRVRKNQVMDGYPMPIGQFWRGLPASINTAYERKDGKFVFFKG 669
Query: 409 NKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWW 445
+K+WVF + +L+PGYP + LG G+P ID+A++W
Sbjct: 670 DKHWVFDEASLEPGYPKHIKELGRGLPTDRIDAALFW 780
Score = 57.4 bits (137), Expect = 4e-06
Identities = 36/91 (39%), Positives = 52/91 (56%), Gaps = 1/91 (1%)
Frame = +1
Query: 449 GKTYFFKGDRYWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEY 507
G+ + FK +WR + + MD GYP PI W+G+P S A+ K+ F F+KG ++
Sbjct: 508 GEMFVFKERWFWRVRKN-QVMD-GYPMPIGQFWRGLPASINTAYERKDGKFV-FFKGDKH 678
Query: 508 WKFNNQILKVEPGYPRSILKDFMGCDGPTDR 538
W F+ L EPGYP+ I + +G PTDR
Sbjct: 679 WVFDEASL--EPGYPKHIKE--LGRGLPTDR 759
>dbj|AB042328.1|AB042328 Homo sapiens mt6-mmp mRNA for membrane-type 6 matrix
metalloproteinase, complete cds
Length = 3311
Score = 334 bits (856), Expect = 2e-89
Identities = 185/502 (36%), Positives = 268/502 (52%), Gaps = 11/502 (2%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL +YGYLPP + L+S E ++ A+ MQ+F G+ TG++D T+ M+KPRC +PD
Sbjct: 272 WLTRYGYLPPPHRAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPD 451
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNV--TPKVGDPETRRAIRRAFDVWQNVT 163
G + RR+RYAL+G W+ + +T+ +++ + ++ R + A W +
Sbjct: 452 -VLGVAGLVRRRRRYALSGSVWKKRTLTWRVRSFPQSSQLSQETVRVLMSYALMAWGMES 628
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG-IGGDTHF 222
LTF EV + ++ DI I FA FH DS PFDG GG LAHA+FPG I GDTHF
Sbjct: 629 GLTFHEVDSPQ----GQEPDILIDFARAFHQDSYPFDGLGGTLAHAFFPGEHPISGDTHF 796
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ--YMETDNFKLPN 280
D +E WT G+ + +G DLF VAVHE GHALGL HS+ P +IM PFYQ + D ++L
Sbjct: 797 DDEETWTFGSKDGEGTDLFAVAVHEFGHALGLGHSSAPNSIMRPFYQGPVGDPDKYRLSQ 976
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD G+Q++YG P
Sbjct: 977 DDRDGLQQLYGKAPQTPYDKPTRKPLAPPPQPPASPTHSPSFPI---------------P 1111
Query: 341 NICDGNFNTLAILRREMFVFKDQWFWRVR-NNRVMDGYPMQITYFWRGLPPSIDAVY--- 396
+ C+GNF+ +A +R E F FK WFWR++ + +++ P ++ FW GLP + V
Sbjct: 1112DRCEGNFDAIANIRGETFFFKGPWFWRLQPSGQLVSPRPARLHRFWEGLPAQVRVVQAAY 1291
Query: 397 -ENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP-HGIDSAIWWEDVGKTYFF 454
+ DG + F G ++WVF+D L+ G L L G+PP +D+ W GKTY
Sbjct: 1292ARHRDGRILLFSGPQFWVFQDRQLEGG-ARPLTEL--GLPPGEEVDAVFSWPQNGKTYLV 1462
Query: 455 KGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
+G +YWRY E DPGYP+ +++W+G P SP V G TYF+KG YW+F
Sbjct: 1463RGRQYWRYDEAAARPDPGYPRDLSLWEGAPPSPDDVTV-SNAGDTYFFKGAHYWRFPKNS 1639
Query: 515 LKVEPGYPRSILKDFMGCDGPT 536
+K EP P+ + +++ C P+
Sbjct: 1640IKTEPDAPQPMGPNWLDCPAPS 1705
>emb|X89576.1|HSMMP17 Homo sapiens mRNA for putative MT2-MMP protein
Length = 2306
Score = 332 bits (850), Expect = 9e-89
Identities = 186/497 (37%), Positives = 260/497 (51%), Gaps = 10/497 (2%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL ++GYLPP DP L++ E + A+ AMQQF G+ TG +D T+ MK PRC +PD
Sbjct: 143 WLSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPD 322
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNV--TPKVGDPETRRAIRRAFDVWQNVT 163
RR+R A KW +++++ ++ +G R + A VW ++
Sbjct: 323 L---PVLTQARRRRQAPAPTKWNKRNLSWRVRTFPRDSPLGHDTVRALMYYALKVWSDIA 493
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPG-PGIGGDTHF 222
PL F EV S DI I F+ H D PFDG GG +AHA+FPG GDTHF
Sbjct: 494 PLNFHEVAGS-------TADIQIDFSKADHNDGYPFDGPGGTVAHAFFPGHHHTAGDTHF 652
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD--NFKLPN 280
D DE WT + + G DLF VAVHE GHA+GL H +IM P+YQ D + LP
Sbjct: 653 DDDEAWTFRSSDAHGMDLFAVAVHEFGHAIGLSHVAAAHSIMRPYYQGPVGDPLRYGLPY 832
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
+D + ++YG P
Sbjct: 833 EDKVRVWQLYGVRESVSPTAQPEEPPLLPEPPDNRSSAPPRKDV---------------P 967
Query: 341 NICDGNFNTLAILRREMFVFKDQWFWRV-RNNRVMDGYPMQITYFWRGLP---PSIDAVY 396
+ C +F+ +A +R E F FK ++FWR+ R+ ++ P Q+ FWRGLP S+DAVY
Sbjct: 968 HRCSTHFDAVAQIRGEAFFFKGKYFWRLTRDRHLVSLQPAQMHRFWRGLPLHLDSVDAVY 1147
Query: 397 E-NSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFK 455
E SD VFFKG++YWVFKD ++ GYP + +PP GID+A W +TYFFK
Sbjct: 1148ERTSDHKIVFFKGDRYWVFKDNNVEEGYPRPVSDF--SLPPGGIDAAFSWAHNDRTYFFK 1321
Query: 456 GDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQIL 515
YWRY + + MDPGYP +W+G+P + A + +G +YF++G+EYWK + L
Sbjct: 1322DQLYWRYDDHTRHMDPGYPAQSPLWRGVPSTLDDA-MRWSDGASYFFRGQEYWKVLDGEL 1498
Query: 516 KVEPGYPRSILKDFMGC 532
+V PGYP+S +D++ C
Sbjct: 1499EVAPGYPQSTARDWLVC 1549
>ref|NM_016155.2| Homo sapiens matrix metalloproteinase 17 (membrane-inserted)
(MMP17), mRNA
Length = 2438
Score = 332 bits (850), Expect = 9e-89
Identities = 186/497 (37%), Positives = 260/497 (51%), Gaps = 10/497 (2%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL ++GYLPP DP L++ E + A+ AMQQF G+ TG +D T+ MK PRC +PD
Sbjct: 271 WLSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPD 450
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNV--TPKVGDPETRRAIRRAFDVWQNVT 163
RR+R A KW +++++ ++ +G R + A VW ++
Sbjct: 451 L---PVLTQARRRRQAPAPTKWNKRNLSWRVRTFPRDSPLGHDTVRALMYYALKVWSDIA 621
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPG-PGIGGDTHF 222
PL F EV S DI I F+ H D PFDG GG +AHA+FPG GDTHF
Sbjct: 622 PLNFHEVAGS-------TADIQIDFSKADHNDGYPFDGPGGTVAHAFFPGHHHTAGDTHF 780
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD--NFKLPN 280
D DE WT + + G DLF VAVHE GHA+GL H +IM P+YQ D + LP
Sbjct: 781 DDDEAWTFRSSDAHGMDLFAVAVHEFGHAIGLSHVAAAHSIMRPYYQGPVGDPLRYGLPY 960
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
+D + ++YG P
Sbjct: 961 EDKVRVWQLYGVRESVSPTAQPEEPPLLPEPPDNRSSAPPRKDV---------------P 1095
Query: 341 NICDGNFNTLAILRREMFVFKDQWFWRV-RNNRVMDGYPMQITYFWRGLP---PSIDAVY 396
+ C +F+ +A +R E F FK ++FWR+ R+ ++ P Q+ FWRGLP S+DAVY
Sbjct: 1096HRCSTHFDAVAQIRGEAFFFKGKYFWRLTRDRHLVSLQPAQMHRFWRGLPLHLDSVDAVY 1275
Query: 397 E-NSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFK 455
E SD VFFKG++YWVFKD ++ GYP + +PP GID+A W +TYFFK
Sbjct: 1276ERTSDHKIVFFKGDRYWVFKDNNVEEGYPRPVSDF--SLPPGGIDAAFSWAHNDRTYFFK 1449
Query: 456 GDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQIL 515
YWRY + + MDPGYP +W+G+P + A + +G +YF++G+EYWK + L
Sbjct: 1450DQLYWRYDDHTRHMDPGYPAQSPLWRGVPSTLDDA-MRWSDGASYFFRGQEYWKVLDGEL 1626
Query: 516 KVEPGYPRSILKDFMGC 532
+V PGYP+S +D++ C
Sbjct: 1627EVAPGYPQSTARDWLVC 1677
>dbj|AB021225.2| Homo sapiens mt4-mmp mRNA for membrane-type-4 matrix
metalloproteinase, complete cds
Length = 2438
Score = 332 bits (850), Expect = 9e-89
Identities = 186/497 (37%), Positives = 260/497 (51%), Gaps = 10/497 (2%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
WL ++GYLPP DP L++ E + A+ AMQQF G+ TG +D T+ MK PRC +PD
Sbjct: 271 WLSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPD 450
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNV--TPKVGDPETRRAIRRAFDVWQNVT 163
RR+R A KW +++++ ++ +G R + A VW ++
Sbjct: 451 L---PVLTQARRRRQAPAPTKWNKRNLSWRVRTFPRDSPLGHDTVRALMYYALKVWSDIA 621
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPG-PGIGGDTHF 222
PL F EV S DI I F+ H D PFDG GG +AHA+FPG GDTHF
Sbjct: 622 PLNFHEVAGS-------TADIQIDFSKADHNDGYPFDGPGGTVAHAFFPGHHHTAGDTHF 780
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD--NFKLPN 280
D DE WT + + G DLF VAVHE GHA+GL H +IM P+YQ D + LP
Sbjct: 781 DDDEAWTFRSSDAHGMDLFAVAVHEFGHAIGLSHVAAAHSIMRPYYQGPVGDPLRYGLPY 960
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
+D + ++YG P
Sbjct: 961 EDKVRVWQLYGVRESVSPTAQPEEPPLLPEPPDNRSSAPPRKDV---------------P 1095
Query: 341 NICDGNFNTLAILRREMFVFKDQWFWRV-RNNRVMDGYPMQITYFWRGLP---PSIDAVY 396
+ C +F+ +A +R E F FK ++FWR+ R+ ++ P Q+ FWRGLP S+DAVY
Sbjct: 1096HRCSTHFDAVAQIRGEAFFFKGKYFWRLTRDRHLVSLQPAQMHRFWRGLPLHLDSVDAVY 1275
Query: 397 E-NSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFK 455
E SD VFFKG++YWVFKD ++ GYP + +PP GID+A W +TYFFK
Sbjct: 1276ERTSDHKIVFFKGDRYWVFKDNNVEEGYPRPVSDF--SLPPGGIDAAFSWAHNDRTYFFK 1449
Query: 456 GDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQIL 515
YWRY + + MDPGYP +W+G+P + A + +G +YF++G+EYWK + L
Sbjct: 1450DQLYWRYDDHTRHMDPGYPAQSPLWRGVPSTLDDA-MRWSDGASYFFRGQEYWKVLDGEL 1626
Query: 516 KVEPGYPRSILKDFMGC 532
+V PGYP+S +D++ C
Sbjct: 1627EVAPGYPQSTARDWLVC 1677
>ref|NM_002424.1| Homo sapiens matrix metalloproteinase 8 (neutrophil collagenase)
(MMP8), mRNA
Length = 2223
Score = 303 bits (777), Expect = 2e-80
Identities = 173/475 (36%), Positives = 246/475 (51%), Gaps = 6/475 (1%)
Frame = +3
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+K+ LP + + + L MQ+F+G+N+TGK + T+D MKKPRCG
Sbjct: 168 VQDYLEKFYQLPSNQYQSTRKNGTNVIVEKLKEMQRFFGLNVTGKPNEETLDMMKKPRCG 347
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQ 160
VPD + LT KW+ ++TY I+N TP++ + E RAI+ AF++W
Sbjct: 348 VPDSGG-----------FMLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWS 494
Query: 161 NVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
+PL F + E DI I F HGD+SPFDG G LAHA+ PG GIGGD
Sbjct: 495 VASPLIFTRISQGE-------ADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDA 653
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD++E WT + N++ LFLVA HE GH+LGL HS+DP A+M P Y + ET N+ LP
Sbjct: 654 HFDAEETWTNTSANYN---LFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQ 824
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ IYG + P
Sbjct: 825 DDIDGIQAIYG-----------------------------------LSSNPIQPTGPSTP 899
Query: 341 NICDGN--FNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYEN 398
CD + F+ + LR E+ FKD++FWR R+ ++ I+ FW LP I A YE+
Sbjct: 900 KPCDPSLTFDAITTLRGEILFFKDRYFWR-RHPQLQRVEMNFISLFWPSLPTGIQAAYED 1076
Query: 399 SDGNFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGD 457
D + +F FKGN+YW + GYP D+ G ID+A+++ KTYFF D
Sbjct: 1077FDRDLIFLFKGNQYWALSGYDILQGYPKDISNYGFPSSVQAIDAAVFYR--SKTYFFVND 1250
Query: 458 RYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
++WRY + + M+PGYPK I+ + GI F ++ F + + G Y+ F+
Sbjct: 1251QFWRYDNQRQFMEPGYPKSISGAFPGIESKVDAVF--QQEHFFHVFSGPRYYAFD 1409
>gb|J05556.1|HUMCLGNA Homo sapiens collagenase mRNA, complete cds
Length = 2223
Score = 303 bits (777), Expect = 2e-80
Identities = 173/475 (36%), Positives = 246/475 (51%), Gaps = 6/475 (1%)
Frame = +3
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+K+ LP + + + L MQ+F+G+N+TGK + T+D MKKPRCG
Sbjct: 168 VQDYLEKFYQLPSNQYQSTRKNGTNVIVEKLKEMQRFFGLNVTGKPNEETLDMMKKPRCG 347
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQ 160
VPD + LT KW+ ++TY I+N TP++ + E RAI+ AF++W
Sbjct: 348 VPDSGG-----------FMLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAIKDAFELWS 494
Query: 161 NVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
+PL F + E DI I F HGD+SPFDG G LAHA+ PG GIGGD
Sbjct: 495 VASPLIFTRISQGE-------ADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDA 653
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD++E WT + N++ LFLVA HE GH+LGL HS+DP A+M P Y + ET N+ LP
Sbjct: 654 HFDAEETWTNTSANYN---LFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQ 824
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ IYG + P
Sbjct: 825 DDIDGIQAIYG-----------------------------------LSSNPIQPTGPSTP 899
Query: 341 NICDGN--FNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYEN 398
CD + F+ + LR E+ FKD++FWR R+ ++ I+ FW LP I A YE+
Sbjct: 900 KPCDPSLTFDAITTLRGEILFFKDRYFWR-RHPQLQRVEMNFISLFWPSLPTGIQAAYED 1076
Query: 399 SDGNFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGD 457
D + +F FKGN+YW + GYP D+ G ID+A+++ KTYFF D
Sbjct: 1077FDRDLIFLFKGNQYWALSGYDILQGYPKDISNYGFPSSVQAIDAAVFYR--SKTYFFVND 1250
Query: 458 RYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
++WRY + + M+PGYPK I+ + GI F ++ F + + G Y+ F+
Sbjct: 1251QFWRYDNQRQFMEPGYPKSISGAFPGIESKVDAVF--QQEHFFHVFSGPRYYAFD 1409
>ref|NM_008611.1| Mus musculus matrix metalloproteinase 8 (Mmp8), mRNA
Length = 1961
Score = 298 bits (762), Expect = 1e-78
Identities = 181/474 (38%), Positives = 245/474 (51%), Gaps = 6/474 (1%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+K+ LP R S R+A + L MQ+F+ + TGK+D T+ M+ PRCGV
Sbjct: 179 ENYLRKFYNLPSNQFRSS--RNATMVAEKLKEMQRFFSLAETGKLDAATMGIMEMPRCGV 352
Query: 104 PDQTRGSSKFNIRRKRYALT--GQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQN 161
PD + LT KW H ++TY I N TP++ E + AI +AF VW
Sbjct: 353 PDSGD-----------FLLTPGSPKWTHTNLTYWIINHTPQLSRAEVKTAIEKAFHVWSV 499
Query: 162 VTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTH 221
+PLTF E+ E DI I F S HGD+SPFDG G LAHA+ PG GIGGD H
Sbjct: 500 ASPLTFTEILQGE-------ADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAH 658
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FDS+E WT + N+ +LFLVA HE GH+LGL HS DP A+M P Y Y E + LP D
Sbjct: 659 FDSEETWTQDSKNY---NLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQD 829
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPN 341
D+ GIQ IYG + P
Sbjct: 830 DINGIQTIYG-----------------------------------PSDNPIQPTGPSTPK 904
Query: 342 ICDGN--FNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
CD + F+ LR E++ FK+++FWR R+ ++ I+ FW GLP + A YE+
Sbjct: 905 ACDPHLRFDATTTLRGEIYFFKEKYFWR-RHPQLRTVDLNFISLFWPGLPNGLQAAYEDF 1081
Query: 400 DGNFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
D + VF FKG +YW LQ GYP D+ G ID+A+ + GKTYFF ++
Sbjct: 1082DRDLVFLFKGRQYWALSGYDLQQGYPRDISNYGFPRSVQAIDAAVSYN--GKTYFFINNQ 1255
Query: 459 YWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
WRY E ++MDPGYPK I +++ G+ F+ ++ F F+ G +Y+ FN
Sbjct: 1256CWRYDNERRSMDPGYPKSIPSMFPGVNCRVDAVFL--QDSFFLFFSGPQYFAFN 1411
>gb|U96696.1|MMU96696 Mus musculus neutrophil collagenase MNC mRNA, complete cds
Length = 1961
Score = 298 bits (762), Expect = 1e-78
Identities = 181/474 (38%), Positives = 245/474 (51%), Gaps = 6/474 (1%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+K+ LP R S R+A + L MQ+F+ + TGK+D T+ M+ PRCGV
Sbjct: 179 ENYLRKFYNLPSNQFRSS--RNATMVAEKLKEMQRFFSLAETGKLDAATMGIMEMPRCGV 352
Query: 104 PDQTRGSSKFNIRRKRYALT--GQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQN 161
PD + LT KW H ++TY I N TP++ E + AI +AF VW
Sbjct: 353 PDSGD-----------FLLTPGSPKWTHTNLTYWIINHTPQLSRAEVKTAIEKAFHVWSV 499
Query: 162 VTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTH 221
+PLTF E+ E DI I F S HGD+SPFDG G LAHA+ PG GIGGD H
Sbjct: 500 ASPLTFTEILQGE-------ADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAH 658
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FDS+E WT + N+ +LFLVA HE GH+LGL HS DP A+M P Y Y E + LP D
Sbjct: 659 FDSEETWTQDSKNY---NLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQD 829
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPN 341
D+ GIQ IYG + P
Sbjct: 830 DINGIQTIYG-----------------------------------PSDNPIQPTGPSTPK 904
Query: 342 ICDGN--FNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
CD + F+ LR E++ FK+++FWR R+ ++ I+ FW GLP + A YE+
Sbjct: 905 ACDPHLRFDATTTLRGEIYFFKEKYFWR-RHPQLRTVDLNFISLFWPGLPNGLQAAYEDF 1081
Query: 400 DGNFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
D + VF FKG +YW LQ GYP D+ G ID+A+ + GKTYFF ++
Sbjct: 1082DRDLVFLFKGRQYWALSGYDLQQGYPRDISNYGFPRSVQAIDAAVSYN--GKTYFFINNQ 1255
Query: 459 YWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
WRY E ++MDPGYPK I +++ G+ F+ ++ F F+ G +Y+ FN
Sbjct: 1256CWRYDNERRSMDPGYPKSIPSMFPGVNCRVDAVFL--QDSFFLFFSGPQYFAFN 1411
>ref|NM_079128.1| Drosophila melanogaster Matrix metalloproteinase 1 (Mmp1), mRNA
Length = 2315
Score = 296 bits (758), Expect = 4e-78
Identities = 176/495 (35%), Positives = 251/495 (50%), Gaps = 6/495 (1%)
Frame = +2
Query: 44 EVWLQKYGYLPPT--DPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
E++L ++GYLP + +P S L T SA+ Q F G+N+TG++D T+ M PRC
Sbjct: 503 EIYLSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRC 682
Query: 102 GVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQN 161
GV D+ R KRYAL G +W+ K++TY I ++ + I RAF VW
Sbjct: 683 GVRDRVGTGDS---RSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAEIGRAFAVWSE 853
Query: 162 VTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTH 221
T LTF V I I F HGD FDG+GG LAHA+FP GGD H
Sbjct: 854 DTDLTFTR-------KTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPV--FGGDAH 1006
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FD E WT+G+P G +LF VA HE GH+LGL HS+ +A+MAPFY+ E FKL D
Sbjct: 1007FDDAELWTIGSPR--GTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFE-PVFKLDED 1177
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPN 341
D IQ +YG + K +
Sbjct: 1178DKAAIQSLYGRKT---------------NQLRPTNVYPATTQRPYSPPKVPLDDSICKDS 1312
Query: 342 ICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDG 401
D FN+ + E + FK ++++ + V +GYP I+ W GLP +IDA + +G
Sbjct: 1313KVDTLFNS---AQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPGNIDAAFTYKNG 1483
Query: 402 NFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWR 461
FFKG +YW ++ + YP ++ GIP H +D+A+ W GK YFFKG ++WR
Sbjct: 1484KTYFFKGTQYWRYQGRQMDGVYPKEISEGFTGIPDH-LDAAMVWGGNGKIYFFKGSKFWR 1660
Query: 462 YSEEMK-TMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVE-- 518
+ + + YPKPI+ W+G+P + A + NG+TYF+KG +Y++F++ V+
Sbjct: 1661FDPAKRPPVKASYPKPISNWEGVPNNLDAALKY-TNGYTYFFKGDKYYRFHDARFAVDSA 1837
Query: 519 -PGYPRSILKDFMGC 532
P +PR + GC
Sbjct: 1838TPPFPRPTAHWWFGC 1882
>gb|AF271666.1|AF271666 Drosophila melanogaster matrix metalloproteinase 1 mRNA, complete
cds
Length = 2315
Score = 296 bits (758), Expect = 4e-78
Identities = 176/495 (35%), Positives = 251/495 (50%), Gaps = 6/495 (1%)
Frame = +2
Query: 44 EVWLQKYGYLPPT--DPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
E++L ++GYLP + +P S L T SA+ Q F G+N+TG++D T+ M PRC
Sbjct: 503 EIYLSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRC 682
Query: 102 GVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQN 161
GV D+ R KRYAL G +W+ K++TY I ++ + I RAF VW
Sbjct: 683 GVRDRVGTGDS---RSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAEIGRAFAVWSE 853
Query: 162 VTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTH 221
T LTF V I I F HGD FDG+GG LAHA+FP GGD H
Sbjct: 854 DTDLTFTR-------KTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPV--FGGDAH 1006
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FD E WT+G+P G +LF VA HE GH+LGL HS+ +A+MAPFY+ E FKL D
Sbjct: 1007FDDAELWTIGSPR--GTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFE-PVFKLDED 1177
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPN 341
D IQ +YG + K +
Sbjct: 1178DKAAIQSLYGRKT---------------NQLRPTNVYPATTQRPYSPPKVPLDDSICKDS 1312
Query: 342 ICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDG 401
D FN+ + E + FK ++++ + V +GYP I+ W GLP +IDA + +G
Sbjct: 1313KVDTLFNS---AQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPGNIDAAFTYKNG 1483
Query: 402 NFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWR 461
FFKG +YW ++ + YP ++ GIP H +D+A+ W GK YFFKG ++WR
Sbjct: 1484KTYFFKGTQYWRYQGRQMDGVYPKEISEGFTGIPDH-LDAAMVWGGNGKIYFFKGSKFWR 1660
Query: 462 YSEEMK-TMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVE-- 518
+ + + YPKPI+ W+G+P + A + NG+TYF+KG +Y++F++ V+
Sbjct: 1661FDPAKRPPVKASYPKPISNWEGVPNNLDAALKY-TNGYTYFFKGDKYYRFHDARFAVDSA 1837
Query: 519 -PGYPRSILKDFMGC 532
P +PR + GC
Sbjct: 1838TPPFPRPTAHWWFGC 1882
>ref|XM_080576.1| Matrix metalloproteinase 1, mRNA
Length = 2300
Score = 296 bits (758), Expect = 4e-78
Identities = 176/495 (35%), Positives = 251/495 (50%), Gaps = 6/495 (1%)
Frame = +2
Query: 44 EVWLQKYGYLPPT--DPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
E++L ++GYLP + +P S L T SA+ Q F G+N+TG++D T+ M PRC
Sbjct: 512 EIYLSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRC 691
Query: 102 GVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQN 161
GV D+ R KRYAL G +W+ K++TY I ++ + I RAF VW
Sbjct: 692 GVRDRVGTGDS---RSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAEIGRAFAVWSE 862
Query: 162 VTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTH 221
T LTF V I I F HGD FDG+GG LAHA+FP GGD H
Sbjct: 863 DTDLTFTR-------KTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHAFFPV--FGGDAH 1015
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FD E WT+G+P G +LF VA HE GH+LGL HS+ +A+MAPFY+ E FKL D
Sbjct: 1016FDDAELWTIGSPR--GTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFE-PVFKLDED 1186
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPN 341
D IQ +YG + K +
Sbjct: 1187DKAAIQSLYGRKT---------------NQLRPTNVYPATTQRPYSPPKVPLDDSICKDS 1321
Query: 342 ICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDG 401
D FN+ + E + FK ++++ + V +GYP I+ W GLP +IDA + +G
Sbjct: 1322KVDTLFNS---AQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPGNIDAAFTYKNG 1492
Query: 402 NFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWR 461
FFKG +YW ++ + YP ++ GIP H +D+A+ W GK YFFKG ++WR
Sbjct: 1493KTYFFKGTQYWRYQGRQMDGVYPKEISEGFTGIPDH-LDAAMVWGGNGKIYFFKGSKFWR 1669
Query: 462 YSEEMK-TMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVE-- 518
+ + + YPKPI+ W+G+P + A + NG+TYF+KG +Y++F++ V+
Sbjct: 1670FDPAKRPPVKASYPKPISNWEGVPNNLDAALKY-TNGYTYFFKGDKYYRFHDARFAVDSA 1846
Query: 519 -PGYPRSILKDFMGC 532
P +PR + GC
Sbjct: 1847TPPFPRPTAHWWFGC 1891
>dbj|AB006779.1|AB006779 Oryctolagus cuniculus mRNA for matrix metalloproteinase-12,
complete cds
Length = 1746
Score = 296 bits (757), Expect = 5e-78
Identities = 179/476 (37%), Positives = 252/476 (52%), Gaps = 9/476 (1%)
Frame = +1
Query: 50 YGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRG 109
YG P + + ++ + MQQF G+N+TG++D +T++ M KPRCGVPD
Sbjct: 121 YGLKVERIPMTKMKTNRNFIEEKVQEMQQFLGLNVTGQLDTSTLEMMHKPRCGVPDVYHF 300
Query: 110 SSKFNIRRKRYALTGQK-WQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFE 168
+ + G+ W+ +ITY IKN TP + + AI++AF VW +VTPL F
Sbjct: 301 KT----------MPGRPVWRKHYITYRIKNYTPDMKREDVEYAIQKAFQVWSDVTPLKFR 450
Query: 169 EVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPW 228
++ E DI I+FASG HGD FDG GG +AHA+ PGPGIGGDTHFD DE W
Sbjct: 451 KITTGE-------ADIMILFASGAHGDYGAFDGRGGVIAHAFGPGPGIGGDTHFDEDEIW 609
Query: 229 TLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQK 288
+ ++ G +LFLVAVHELGHALGL+HSNDP AIM P Y Y++ + F L DD++GIQ
Sbjct: 610 S---KSYKGTNLFLVAVHELGHALGLDHSNDPKAIMFPTYGYIDLNTFHLSADDIRGIQS 780
Query: 289 IYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGN-- 346
+YG H+ + +P CD N
Sbjct: 781 LYG-------------GPEQHQPM--------------------PKPDNPEPTACDHNLK 861
Query: 347 FNTLAILRREMFVFKDQWF-WRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF 405
F+ + + ++F FKD +F W++ + I+ W LP I+A YE D + VF
Sbjct: 862 FDAVTTVGNKIFFFKDSFFWWKIPKSSTTS--VRLISSLWPTLPSGIEAAYEIGDRHQVF 1035
Query: 406 -FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSE 464
FKG+K+W+ LQP YP + +LG ID+A++ + KTYFF + YWRY E
Sbjct: 1036LFKGDKFWLISHLRLQPNYPKSIHSLGFPDFVKKIDAAVFNPSLRKTYFFVDNLYWRYDE 1215
Query: 465 EMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGK---EYWKFNNQILK 516
+ MD GYPK IT + GI F + + YF++G EY F++++ K
Sbjct: 1216RREVMDAGYPKLITKHFPGIGPKIDAVFYFQR--YYYFFQGPNQLEYDTFSSRVTK 1377
Score = 53.5 bits (127), Expect = 6e-05
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Frame = +1
Query: 408 GNKYWVFKDTTLQPGYPHDLITLGNGIP------PHGIDSAIWWEDVGKTYFFKGDRYWR 461
GNK + FKD+ P T I P GI++A D + + FKGD++W
Sbjct: 883 GNKIFFFKDSFFWWKIPKSSTTSVRLISSLWPTLPSGIEAAYEIGDRHQVFLFKGDKFWL 1062
Query: 462 YSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEYWKFNNQILKVE 518
S + P YPK I G P+ + A + TYF+ YW+++ + ++
Sbjct: 1063 ISH--LRLQPNYPKSIHSL-GFPDFVKKIDAAVFNPSLRKTYFFVDNLYWRYDERREVMD 1233
Query: 519 PGYPRSILKDFMG 531
GYP+ I K F G
Sbjct: 1234 AGYPKLITKHFPG 1272
>emb|Y13342.1|MMY13342 Mus musculus mRNA for collagenase-2
Length = 1480
Score = 295 bits (756), Expect = 7e-78
Identities = 180/474 (37%), Positives = 244/474 (50%), Gaps = 6/474 (1%)
Frame = +3
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+K+ LP R S R+A + L MQ+F+ + TGK+D T+ M+ PRCGV
Sbjct: 111 ENYLRKFYNLPSNQFRSS--RNATMVAEKLKEMQRFFSLAETGKLDAATMGIMEMPRCGV 284
Query: 104 PDQTRGSSKFNIRRKRYALT--GQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQN 161
PD + LT KW H ++TY I N TP++ E + AI +AF VW
Sbjct: 285 PDSGD-----------FLLTPGSPKWTHTNLTYRIINHTPQLSRAEVKTAIEKAFHVWSV 431
Query: 162 VTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTH 221
+PLTF E+ E DI I F S HGD+SPFDG G LAHA+ PG GIGGD H
Sbjct: 432 ASPLTFTEILQGE-------ADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAH 590
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FDS+E WT + N+ +LFLVA HE GH+LGL HS DP A+M P Y Y E + LP D
Sbjct: 591 FDSEETWTQDSKNY---NLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQD 761
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPN 341
D+ GIQ IYG + P
Sbjct: 762 DINGIQTIYG-----------------------------------PSDNPIQPTGPSTPK 836
Query: 342 ICDGN--FNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
CD + F+ LR E++ FKD++FWR R+ ++ I+ FW LP + A YE+
Sbjct: 837 ACDPHLRFDATTTLRGEIYFFKDKYFWR-RHPQLRTVDLNFISLFWPFLPNGLQAAYEDF 1013
Query: 400 DGNFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
D + VF FKG +YW LQ GYP D+ G ID+A+ + GKTYFF ++
Sbjct: 1014DRDLVFLFKGRQYWALSGYDLQQGYPRDISNYGFPRSVQAIDAAVSYN--GKTYFFINNQ 1187
Query: 459 YWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
WRY + ++MDPGYPK I +++ G+ F+ ++ F F+ G +Y+ FN
Sbjct: 1188CWRYDNQRRSMDPGYPKSIPSMFPGVNCRVDAVFL--QDSFFLFFSGPQYFAFN 1343
>gb|U88652.1|OCU88652 Oryctolagus cuniculus macrophage metalloelastase MMP-12 precursor,
mRNA, complete cds
Length = 1792
Score = 295 bits (754), Expect = 1e-77
Identities = 180/476 (37%), Positives = 253/476 (52%), Gaps = 9/476 (1%)
Frame = +1
Query: 50 YGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRG 109
YG P + + ++ + MQQF G+N+TG++D +T++ M KPRCGVPD
Sbjct: 136 YGLKVERIPMTKMKTNRNFIEEKVQEMQQFLGLNVTGQLDTSTLEMMHKPRCGVPDVYHF 315
Query: 110 SSKFNIRRKRYALTGQK-WQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFE 168
+ + G+ W+ +ITY IKN TP + + AI++AF VW +VTPL F
Sbjct: 316 KT----------MPGRPVWRKHYITYRIKNYTPDMKREDVEYAIQKAFQVWSDVTPLKFR 465
Query: 169 EVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPW 228
++ GK DI I+FASG HGD FDG GG +AHA+ PGPGIGGDTHFD DE W
Sbjct: 466 KIT-----TGK--ADIMILFASGAHGDYGAFDGRGGVIAHAFGPGPGIGGDTHFDEDEIW 624
Query: 229 TLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQK 288
+ ++ G +LFLVAVHELGHALGL+HSNDP AIM P Y Y++ + F L DD++GIQ
Sbjct: 625 S---KSYKGTNLFLVAVHELGHALGLDHSNDPKAIMFPTYGYIDLNTFHLSADDIRGIQS 795
Query: 289 IYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGN-- 346
+YG H+ + +P CD N
Sbjct: 796 LYG-------------GPEQHQPM--------------------PKPDNPEPTACDHNLK 876
Query: 347 FNTLAILRREMFVFKDQWF-WRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF 405
F+ + + ++F FKD +F W++ + I+ W LP I+A YE D + VF
Sbjct: 877 FDAVTTVGNKIFFFKDSFFWWKIPKSSTTS--VRLISSLWPTLPSGIEAAYEIGDRHQVF 1050
Query: 406 -FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSE 464
FKG+K+W+ LQP YP + +LG ID+A++ + KTYFF + YWRY E
Sbjct: 1051LFKGDKFWLISHLRLQPNYPKSIHSLGFPDFVKKIDAAVFNPSLRKTYFFVDNLYWRYDE 1230
Query: 465 EMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGK---EYWKFNNQILK 516
+ MD GYPK IT + GI F + + YF++G EY F++++ K
Sbjct: 1231RREVMDAGYPKLITKHFPGIGPKIDAVFYFQR--YYYFFQGPNQLEYDTFSSRVTK 1392
Score = 53.5 bits (127), Expect = 6e-05
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Frame = +1
Query: 408 GNKYWVFKDTTLQPGYPHDLITLGNGIP------PHGIDSAIWWEDVGKTYFFKGDRYWR 461
GNK + FKD+ P T I P GI++A D + + FKGD++W
Sbjct: 898 GNKIFFFKDSFFWWKIPKSSTTSVRLISSLWPTLPSGIEAAYEIGDRHQVFLFKGDKFWL 1077
Query: 462 YSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEYWKFNNQILKVE 518
S + P YPK I G P+ + A + TYF+ YW+++ + ++
Sbjct: 1078 ISH--LRLQPNYPKSIHSL-GFPDFVKKIDAAVFNPSLRKTYFFVDNLYWRYDERREVMD 1248
Query: 519 PGYPRSILKDFMG 531
GYP+ I K F G
Sbjct: 1249 AGYPKLITKHFPG 1287
>dbj|D82053.1|D82053 Cynops pyrrhogaster mRNA for stromelysin-1/2-a, complete cds
Length = 1755
Score = 294 bits (752), Expect = 2e-77
Identities = 172/449 (38%), Positives = 231/449 (51%), Gaps = 4/449 (0%)
Frame = +1
Query: 73 LAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHI 132
L MQ F+G+ +TGK+D NT++ M KPRCGV D S F R W+ +
Sbjct: 223 LQEMQAFFGLEVTGKLDSNTLEMMHKPRCGVADVAE-YSHFGGR--------PTWRTTSL 375
Query: 133 TYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGF 192
TY I TP + + + AIRRAF VW +VTPLTF S + G D+ I+ F +G
Sbjct: 376 TYRILGYTPDMAEADVDTAIRRAFKVWSDVTPLTF-----SRIYEGTADIQIS--FGAGV 534
Query: 193 HGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHAL 252
HGD PFDG G LAHA+ PG IGGD HFD DE WT G+ G +LFLVA HE GH+L
Sbjct: 535 HGDFYPFDGPHGTLAHAFAPGNSIGGDAHFDEDETWTAGSA---GYNLFLVAAHEFGHSL 705
Query: 253 GLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSV 312
GL HS D +A+M P Y Y++ F+LP DD+ GIQ +YG
Sbjct: 706 GLSHSGDRSALMYPTYSYIDPARFRLPQDDVDGIQALYGASPN----------------- 834
Query: 313 XXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGN--FNTLAILRREMFVFKDQWFWRVRN 370
P+ICD F+ + LR E+ FKD FWR R
Sbjct: 835 PVPTTPQATTPTTTVSTTTTTTSSPINPSICDPTLVFDAITTLRGEILFFKDSSFWR-RV 1011
Query: 371 NRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF-FKGNKYWVFKDTTLQPGYPHDLIT 429
+ + Y I+ W LP I A YEN + + +F FKG+KYW + + P YP ++
Sbjct: 1012PTIKEVYNYPISTSWPSLPSGIQAAYENPETDQIFLFKGSKYWALQGFDILPNYPKNIDK 1191
Query: 430 LGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPI-TIWKGIPESPQ 488
LG I++A++ + KTYFF G++YW Y E KTMD P+ I + GI +
Sbjct: 1192LGFPRTVKHINAAVYLQSTQKTYFFAGEQYWSYDEARKTMDKESPRRIEDDFPGIGKKVH 1371
Query: 489 GAFVHKENGFTYFYKGKEYWKFNNQILKV 517
F ++NG YF+ G + ++FN + KV
Sbjct: 1372AVF--EDNGLLYFFSGHKQFEFNMKSKKV 1452
>gb|AF034087.1|AF034087 Equus caballus matrix metalloproteinase 13 (MMP13) mRNA, complete
cds
Length = 2727
Score = 293 bits (750), Expect = 3e-77
Identities = 182/490 (37%), Positives = 256/490 (52%), Gaps = 8/490 (1%)
Frame = +2
Query: 38 EQYFNVEVWLQKYGYLPPTDPRMSVLRSA-ETMQSALAAMQQFYGINMTGKVDRNTIDWM 96
E + E +L+ Y Y P +P + ++A ++ L MQ F+G+ +TGK+D NT+D M
Sbjct: 122 EDFQLAERYLKSYYY--PLNPAGILKKTAANSVVDRLREMQSFFGLEVTGKLDDNTLDIM 295
Query: 97 KKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAF 156
KKPRCGVPD ++N+ + KW ++TY I N TP + E +A ++AF
Sbjct: 296 KKPRCGVPD----VGEYNVFPRTL-----KWPKMNLTYRIVNYTPDLTHSEVEKAFKKAF 448
Query: 157 DVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGI 216
VW +VTPL F + L NG DI I F + HGD PFDG G LAHA+ PGP
Sbjct: 449 KVWSDVTPLNF-----TRLYNG--TADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNY 607
Query: 217 GGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNF 276
GGD HFD DE WT + G +LFLVA HE GH+LGL+HS DP A+M P Y Y +F
Sbjct: 608 GGDAHFDDDETWT---SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHF 778
Query: 277 KLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXX 336
LP+DD+QGIQ +YG
Sbjct: 779 VLPDDDVQGIQYLYGPGDEDPNPKHPKT-------------------------------- 862
Query: 337 GAKPNICDGNFNTLAI--LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDA 394
P+ CD + + AI LR E VFKD++FWR+ + +++D FW LP IDA
Sbjct: 863 ---PDKCDPSLSLDAITSLRGETMVFKDRFFWRL-HPQLVDAELFLTKSFWPELPNRIDA 1030
Query: 395 VYENSDGNFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYF 453
YE+ + +F F+G K+W + GYP + LG I +A+ +ED GKT F
Sbjct: 1031AYEHPSKDLIFIFRGRKFWALNGYDILEGYPQKISELGFPKDVKKISAAVHFEDTGKTLF 1210
Query: 454 FKGDRYWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGK---EYWK 509
F G++ WRY + + MD YP+ I + GI + V+++NG+ YF+ G EY
Sbjct: 1211FSGNQVWRYDDTNRMMDKDYPRLIEEDFPGIGDKVDA--VYEKNGYIYFFNGPIQFEYSI 1384
Query: 510 FNNQILKVEP 519
++N+I++V P
Sbjct: 1385WSNRIVRVMP 1414
>ref|NM_022221.1| Rattus norvegicus neutrophil collagenease (LOC63849), mRNA
Length = 1401
Score = 292 bits (748), Expect = 6e-77
Identities = 179/474 (37%), Positives = 243/474 (50%), Gaps = 6/474 (1%)
Frame = +1
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+K+ +LP R + R+A + L MQ+F+G+ TGK D TI+ M+KPRCGV
Sbjct: 109 ENYLRKFYHLPSNQFRSA--RNATMIAEKLKEMQRFFGLPETGKPDAATIEIMEKPRCGV 282
Query: 104 PDQTRGSSKFNIRRKRYALT--GQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQN 161
PD + LT KW H ++TY I N TP++ E + I +AF +W
Sbjct: 283 PDSGD-----------FLLTPGSPKWTHTNLTYRIINHTPQMSKAEVKTEIEKAFKIWSV 429
Query: 162 VTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTH 221
+ LTF E E DI I F S HGD+SPFDG G LAHA+ PG GIGGD H
Sbjct: 430 PSTLTFTETLEGE-------ADINIAFVSRDHGDNSPFDGPNGILAHAFQPGRGIGGDAH 588
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FDS+E WT + N+ +LFLVA HE GH+LGL HS DP A+M P Y Y E + LP D
Sbjct: 589 FDSEETWTQDSKNY---NLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQD 759
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPN 341
D+ GIQ IYG + P
Sbjct: 760 DINGIQTIYG-----------------------------------PSDNPVQPTGPSTPT 834
Query: 342 ICDGN--FNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
CD + F+ LR E++ FKD++FWR R+ ++ I+ FW LP + A YE+
Sbjct: 835 ACDPHLRFDAATTLRGEIYFFKDKYFWR-RHPQLRTVDLNFISLFWPFLPNGLQAAYEDF 1011
Query: 400 DGNFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
D + VF FKG +YW LQ GYP D+ G ID+A+ + GKTYFF ++
Sbjct: 1012DRDLVFLFKGRQYWALSAYDLQQGYPRDISNYGFPRSVQAIDAAVSYN--GKTYFFVNNQ 1185
Query: 459 YWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
WRY + ++MDPGYP I +++ GI F +++ F F+ G +Y+ FN
Sbjct: 1186CWRYDNQRRSMDPGYPTSIASVFPGINCRIDAVF--QQDSFFLFFSGPQYFAFN 1341
>emb|AJ007288.1|RNO7288 Rattus norvegicus mRNA for neutrophil collagenease
Length = 1401
Score = 292 bits (748), Expect = 6e-77
Identities = 179/474 (37%), Positives = 243/474 (50%), Gaps = 6/474 (1%)
Frame = +1
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+K+ +LP R + R+A + L MQ+F+G+ TGK D TI+ M+KPRCGV
Sbjct: 109 ENYLRKFYHLPSNQFRSA--RNATMIAEKLKEMQRFFGLPETGKPDAATIEIMEKPRCGV 282
Query: 104 PDQTRGSSKFNIRRKRYALT--GQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQN 161
PD + LT KW H ++TY I N TP++ E + I +AF +W
Sbjct: 283 PDSGD-----------FLLTPGSPKWTHTNLTYRIINHTPQMSKAEVKTEIEKAFKIWSV 429
Query: 162 VTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTH 221
+ LTF E E DI I F S HGD+SPFDG G LAHA+ PG GIGGD H
Sbjct: 430 PSTLTFTETLEGE-------ADINIAFVSRDHGDNSPFDGPNGILAHAFQPGRGIGGDAH 588
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FDS+E WT + N+ +LFLVA HE GH+LGL HS DP A+M P Y Y E + LP D
Sbjct: 589 FDSEETWTQDSKNY---NLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQD 759
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPN 341
D+ GIQ IYG + P
Sbjct: 760 DINGIQTIYG-----------------------------------PSDNPVQPTGPSTPT 834
Query: 342 ICDGN--FNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
CD + F+ LR E++ FKD++FWR R+ ++ I+ FW LP + A YE+
Sbjct: 835 ACDPHLRFDAATTLRGEIYFFKDKYFWR-RHPQLRTVDLNFISLFWPFLPNGLQAAYEDF 1011
Query: 400 DGNFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
D + VF FKG +YW LQ GYP D+ G ID+A+ + GKTYFF ++
Sbjct: 1012DRDLVFLFKGRQYWALSAYDLQQGYPRDISNYGFPRSVQAIDAAVSYN--GKTYFFVNNQ 1185
Query: 459 YWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
WRY + ++MDPGYP I +++ GI F +++ F F+ G +Y+ FN
Sbjct: 1186CWRYDNQRRSMDPGYPTSIASVFPGINCRIDAVF--QQDSFFLFFSGPQYFAFN 1341
>dbj|AK020292.1|AK020292 Mus musculus adult male cecum cDNA, RIKEN full-length enriched
library, clone:9130404C19:matrix metalloproteinase 10,
full insert sequence
Length = 1735
Score = 291 bits (744), Expect = 2e-76
Identities = 176/471 (37%), Positives = 245/471 (51%), Gaps = 5/471 (1%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L+KY + ++ + + + + MQ+F G+ MTGK+D NT++ M KPRCGVPD
Sbjct: 162 YLEKYYNFKKNEKQIFKRKDSSPVVKKIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPD 341
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
G S F KW+ HITY I N TP + AI +A VW+ VTPL
Sbjct: 342 -VGGFSTFP--------GSPKWRKSHITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPL 494
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
TF + E DI I FA G HGD PFDG G LAHAY PGPG GD HFD D
Sbjct: 495 TFSRISEGE-------ADIMISFAVGEHGDFYPFDGPGQSLAHAYPPGPGFYGDVHFDDD 653
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD-NFKLPNDDLQ 284
E WTL G +LFLVA HELGH+LGL HS+ ++M P Y++ + NF L DD++
Sbjct: 654 EKWTLA---PSGTNLFLVAAHELGHSLGLFHSDKKESLMYPVYRFSTSPANFHLSQDDIE 824
Query: 285 GIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICD 344
GIQ +YG P+ CD
Sbjct: 825 GIQSLYGAGPSSDATVVPVLSVSPRPET---------------------------PDKCD 923
Query: 345 G--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE-NSDG 401
+F++++ LR E+ FKD++FWR R++ + I+ FW LP +DA YE ++
Sbjct: 924 PALSFDSVSTLRGEVLFFKDRYFWR-RSHWNPEPEFHLISAFWPTLPSDLDAAYEAHNTD 1100
Query: 402 NFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWR 461
+ + FKG+++W + +Q GYP + TLG ID+A++ ++ KTYFF GD+YWR
Sbjct: 1101SVLIFKGSQFWAVRGNEVQAGYPKGIHTLGFPPTVKKIDAAVFEKEKKKTYFFVGDKYWR 1280
Query: 462 YSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
+ E MD G+P+ IT + GI PQ V E GF YF++G ++F+
Sbjct: 1281FDETRHVMDKGFPRQITDDFPGI--EPQVDAVLHEFGFFYFFRGSSQFEFD 1427
>ref|NM_019471.1| Mus musculus matrix metalloproteinase 10 (Mmp10), mRNA
Length = 1744
Score = 291 bits (744), Expect = 2e-76
Identities = 176/471 (37%), Positives = 245/471 (51%), Gaps = 5/471 (1%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L+KY + ++ + + + + MQ+F G+ MTGK+D NT++ M KPRCGVPD
Sbjct: 150 YLEKYYNFKKNEKQIFKRKDSSPVVKKIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPD 329
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
G S F KW+ HITY I N TP + AI +A VW+ VTPL
Sbjct: 330 -VGGFSTFP--------GSPKWRKSHITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPL 482
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
TF + E DI I FA G HGD PFDG G LAHAY PGPG GD HFD D
Sbjct: 483 TFSRISEGE-------ADIMISFAVGEHGDFYPFDGPGQSLAHAYPPGPGFYGDVHFDDD 641
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD-NFKLPNDDLQ 284
E WTL G +LFLVA HELGH+LGL HS+ ++M P Y++ + NF L DD++
Sbjct: 642 EKWTLA---PSGTNLFLVAAHELGHSLGLFHSDKKESLMYPVYRFSTSPANFHLSQDDIE 812
Query: 285 GIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICD 344
GIQ +YG P+ CD
Sbjct: 813 GIQSLYGAGPSSDATVVPVLSVSPRPET---------------------------PDKCD 911
Query: 345 G--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE-NSDG 401
+F++++ LR E+ FKD++FWR R++ + I+ FW LP +DA YE ++
Sbjct: 912 PALSFDSVSTLRGEVLFFKDRYFWR-RSHWNPEPEFHLISAFWPTLPSDLDAAYEAHNTD 1088
Query: 402 NFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWR 461
+ + FKG+++W + +Q GYP + TLG ID+A++ ++ KTYFF GD+YWR
Sbjct: 1089SVLIFKGSQFWAVRGNEVQAGYPKGIHTLGFPPTVKKIDAAVFEKEKKKTYFFVGDKYWR 1268
Query: 462 YSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
+ E MD G+P+ IT + GI PQ V E GF YF++G ++F+
Sbjct: 1269FDETRHVMDKGFPRQITDDFPGI--EPQVDAVLHEFGFFYFFRGSSQFEFD 1415
>emb|Y13185.1|MMMMP10 Mus musculus mRNA for stromelysin-2
Length = 1744
Score = 291 bits (744), Expect = 2e-76
Identities = 176/471 (37%), Positives = 245/471 (51%), Gaps = 5/471 (1%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L+KY + ++ + + + + MQ+F G+ MTGK+D NT++ M KPRCGVPD
Sbjct: 150 YLEKYYNFKKNEKQIFKRKDSSPVVKKIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPD 329
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
G S F KW+ HITY I N TP + AI +A VW+ VTPL
Sbjct: 330 -VGGFSTFP--------GSPKWRKSHITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPL 482
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
TF + E DI I FA G HGD PFDG G LAHAY PGPG GD HFD D
Sbjct: 483 TFSRISEGE-------ADIMISFAVGEHGDFYPFDGPGQSLAHAYPPGPGFYGDVHFDDD 641
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD-NFKLPNDDLQ 284
E WTL G +LFLVA HELGH+LGL HS+ ++M P Y++ + NF L DD++
Sbjct: 642 EKWTLA---PSGTNLFLVAAHELGHSLGLFHSDKKESLMYPVYRFSTSPANFHLSQDDIE 812
Query: 285 GIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICD 344
GIQ +YG P+ CD
Sbjct: 813 GIQSLYGAGPSSDATVVPVLSVSPRPET---------------------------PDKCD 911
Query: 345 G--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE-NSDG 401
+F++++ LR E+ FKD++FWR R++ + I+ FW LP +DA YE ++
Sbjct: 912 PALSFDSVSTLRGEVLFFKDRYFWR-RSHWNPEPEFHLISAFWPTLPSDLDAAYEAHNTD 1088
Query: 402 NFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWR 461
+ + FKG+++W + +Q GYP + TLG ID+A++ ++ KTYFF GD+YWR
Sbjct: 1089SVLIFKGSQFWAVRGNEVQAGYPKGIHTLGFPPTVKKIDAAVFEKEKKKTYFFVGDKYWR 1268
Query: 462 YSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
+ E MD G+P+ IT + GI PQ V E GF YF++G ++F+
Sbjct: 1269FDETRHVMDKGFPRQITDDFPGI--EPQVDAVLHEFGFFYFFRGSSQFEFD 1415
>gb|AF201729.1|AF201729 Canis familiaris matrix metalloproteinase-13 mRNA, partial cds
Length = 1356
Score = 290 bits (741), Expect = 4e-76
Identities = 177/479 (36%), Positives = 246/479 (50%), Gaps = 5/479 (1%)
Frame = +1
Query: 38 EQYFNVEVWLQKYGYLPPTDPRMSVLRSAE-TMQSALAAMQQFYGINMTGKVDRNTIDWM 96
E + E +L+ Y Y P +P + +SA ++ L MQ F+G+ +TGK+D NT+D M
Sbjct: 76 EDFQLAERYLKSYYY--PLNPAGILKKSAAGSVADRLREMQSFFGLEVTGKLDDNTLDIM 249
Query: 97 KKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAF 156
KKPRCGVPD ++N+ + KW ++TY I N TP + E +A ++AF
Sbjct: 250 KKPRCGVPD----VGEYNVFPRTL-----KWSKTNLTYRIVNYTPDLTHSEVEKAFKKAF 402
Query: 157 DVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGI 216
VW +VTPL F + L +G DI I F + HGD PFDG G LAHA+ PGP
Sbjct: 403 KVWSDVTPLNF-----TRLHDG--TADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNY 561
Query: 217 GGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNF 276
GGD HFD DE WT + G +LFLVA HE GH+LGL+HS DP A+M P Y Y +F
Sbjct: 562 GGDAHFDDDETWT---SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHF 732
Query: 277 KLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXX 336
LP+DD+QGIQ +YG
Sbjct: 733 MLPDDDVQGIQSLYGPGDEDPNPRHPKT-------------------------------- 816
Query: 337 GAKPNICDGNFNTLAI--LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDA 394
P+ CD + + AI LR E +FKD++FWR+ +V D FW LP IDA
Sbjct: 817 ---PDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQV-DAELFLTKSFWPELPNRIDA 984
Query: 395 VYENSDGNFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYF 453
YE+ + +F F+G KYW + GYP + LG I +A+ +ED GKT F
Sbjct: 985 AYEHPSRDLIFIFRGRKYWALNGYDILEGYPQKISELGFPKEVKKISAAVHFEDTGKTLF 1164
Query: 454 FKGDRYWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
F G++ W Y + + MD YP+ I + GI + V+++NG+ YF+ G +++N
Sbjct: 1165FSGNQVWSYDDTNQIMDKDYPRLIEEDFPGIGDKVDA--VYEKNGYIYFFNGPIQFEYN 1335
>emb|X81334.1|HSCOLLAG3 H.sapiens mRNA for collagenase-3 protein
Length = 1946
Score = 288 bits (736), Expect = 1e-75
Identities = 179/483 (37%), Positives = 246/483 (50%), Gaps = 7/483 (1%)
Frame = +1
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+ Y Y P + +A +M L MQ F+G+ +TGK+D NT+D MKKPRCGV
Sbjct: 145 ERYLRSY-YHPTNLAGILKENAASSMTERLREMQSFFGLEVTGKLDDNTLDVMKKPRCGV 321
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVT 163
PD ++N+ + KW ++TY I N TP + E +A ++AF VW +VT
Sbjct: 322 PDV----GEYNVFPRTL-----KWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVT 474
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PL F + L +G DI I F HGD PFDG G LAHA+ PGP GGD HFD
Sbjct: 475 PLNF-----TRLHDGI--ADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFD 633
Query: 224 SDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDL 283
DE WT + G +LFLVA HE GH+LGL+HS DP A+M P Y Y +F LP+DD+
Sbjct: 634 DDETWTSSSK---GYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDV 804
Query: 284 QGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNIC 343
QGIQ +YG P+ C
Sbjct: 805 QGIQSLYGPGDEDPNPKHPKT-----------------------------------PDKC 879
Query: 344 DGNFNTLAI--LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDG 401
D + + AI LR E +FKD++FWR+ +V D FW LP IDA YE+
Sbjct: 880 DPSLSLDAITSLRGETMIFKDRFFWRLHPQQV-DAELFLTKSFWPELPNRIDAAYEHPSH 1056
Query: 402 NFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
+ +F F+G K+W + GYP + LG I +A+ +ED GKT F G++ W
Sbjct: 1057DLIFIFRGRKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGNQVW 1236
Query: 461 RYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGK---EYWKFNNQILK 516
RY + MD YP+ I + GI + V+++NG+ YF+ G EY ++N+I++
Sbjct: 1237RYDDTNHIMDKDYPRLIEEDFPGIGDKVDA--VYEKNGYIYFFNGPIQFEYSIWSNRIVR 1410
Query: 517 VEP 519
V P
Sbjct: 1411VMP 1419
>emb|X75308.1|HSRNAC3 H.sapiens mRNA for collagenase 3
Length = 2698
Score = 288 bits (736), Expect = 1e-75
Identities = 179/483 (37%), Positives = 246/483 (50%), Gaps = 7/483 (1%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+ Y Y P + +A +M L MQ F+G+ +TGK+D NT+D MKKPRCGV
Sbjct: 122 ERYLRSY-YHPTNLAGILKENAASSMTERLREMQSFFGLEVTGKLDDNTLDVMKKPRCGV 298
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVT 163
PD ++N+ + KW ++TY I N TP + E +A ++AF VW +VT
Sbjct: 299 PDV----GEYNVFPRTL-----KWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVT 451
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PL F + L +G DI I F HGD PFDG G LAHA+ PGP GGD HFD
Sbjct: 452 PLNF-----TRLHDGI--ADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFD 610
Query: 224 SDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDL 283
DE WT + G +LFLVA HE GH+LGL+HS DP A+M P Y Y +F LP+DD+
Sbjct: 611 DDETWTSSSK---GYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDV 781
Query: 284 QGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNIC 343
QGIQ +YG P+ C
Sbjct: 782 QGIQSLYGPGDEDPNPKHPKT-----------------------------------PDKC 856
Query: 344 DGNFNTLAI--LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDG 401
D + + AI LR E +FKD++FWR+ +V D FW LP IDA YE+
Sbjct: 857 DPSLSLDAITSLRGETMIFKDRFFWRLHPQQV-DAELFLTKSFWPELPNRIDAAYEHPSH 1033
Query: 402 NFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
+ +F F+G K+W + GYP + LG I +A+ +ED GKT F G++ W
Sbjct: 1034DLIFIFRGRKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGNQVW 1213
Query: 461 RYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGK---EYWKFNNQILK 516
RY + MD YP+ I + GI + V+++NG+ YF+ G EY ++N+I++
Sbjct: 1214RYDDTNHIMDKDYPRLIEEDFPGIGDKVDA--VYEKNGYIYFFNGPIQFEYSIWSNRIVR 1387
Query: 517 VEP 519
V P
Sbjct: 1388VMP 1396
>emb|Z27093.1|XLSTROL3 X.laevis mRNA for stromelysin-3
Length = 2890
Score = 288 bits (736), Expect = 1e-75
Identities = 163/438 (37%), Positives = 229/438 (52%), Gaps = 4/438 (0%)
Frame = +3
Query: 99 PRCGVPD--QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAF 156
PRCGVPD SS R+KR+ L+G +W ++TY I ++ + RR I A
Sbjct: 399 PRCGVPDIPAPPDSSSGRNRQKRFVLSGGRWDKTNLTYKIIRFPWQLSKVKVRRTIAEAL 578
Query: 157 DVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGI 216
VW VTPLTF EV G+ D I I F +HGD+ PFDG GG LAHA+FP
Sbjct: 579 KVWSEVTPLTFTEV-----HEGRSD--IIIDFTRYWHGDNLPFDGPGGILAHAFFPKTHR 737
Query: 217 GGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNF 276
GD HFD DE WT+G N+ G DL VA HE GH LGL+HS+ ++M+PFY +
Sbjct: 738 EGDVHFDYDEAWTIG--NNIGTDLLQVAAHEFGHMLGLQHSSISKSLMSPFYTFRYP--L 905
Query: 277 KLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXX 336
L DD GIQ +YG +
Sbjct: 906 SLSADDKHGIQFLYG-------------------APRPPTPSPTPRVEVNQVENESNEIP 1028
Query: 337 GAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVY 396
A+P+ C NF+ ++ +R E+F FK + WR+R ++ +GYP + WRG+P ++DA +
Sbjct: 1029AAEPDACKTNFDAVSTIRGELFFFKSGYVWRLRGGKLQNGYPALASRHWRGIPDTVDAAF 1208
Query: 397 ENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWW--EDVGKTYFF 454
E+S GN FF G+++WVF D LQ P + +G + I +A W E KTY F
Sbjct: 1209EDSVGNIWFFYGSQFWVF-DGKLQASGPFPITDIGISVTQ--IQAAFVWGTEKNKKTYLF 1379
Query: 455 KGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
+G YWR++ E + ++ + + I W+G+P+ AF E G+ YF KG++YWKF+
Sbjct: 1380RGGEYWRFNPETRRVESRHSRRIGDWRGVPKGIDAAF-QDEQGYAYFVKGRQYWKFDPFK 1556
Query: 515 LKVEPGYPRSILKDFMGC 532
++V GYP I +DF C
Sbjct: 1557VRVMDGYPHLISQDFFNC 1610
>ref|NM_002427.2| Homo sapiens matrix metalloproteinase 13 (collagenase 3) (MMP13),
mRNA
Length = 2722
Score = 288 bits (736), Expect = 1e-75
Identities = 179/483 (37%), Positives = 246/483 (50%), Gaps = 7/483 (1%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+ Y Y P + +A +M L MQ F+G+ +TGK+D NT+D MKKPRCGV
Sbjct: 146 ERYLRSY-YHPTNLAGILKENAASSMTERLREMQSFFGLEVTGKLDDNTLDVMKKPRCGV 322
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVT 163
PD ++N+ + KW ++TY I N TP + E +A ++AF VW +VT
Sbjct: 323 PDV----GEYNVFPRTL-----KWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVT 475
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PL F + L +G DI I F HGD PFDG G LAHA+ PGP GGD HFD
Sbjct: 476 PLNF-----TRLHDGI--ADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFD 634
Query: 224 SDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDL 283
DE WT + G +LFLVA HE GH+LGL+HS DP A+M P Y Y +F LP+DD+
Sbjct: 635 DDETWTSSSK---GYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDV 805
Query: 284 QGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNIC 343
QGIQ +YG P+ C
Sbjct: 806 QGIQSLYGPGDEDPNPKHPKT-----------------------------------PDKC 880
Query: 344 DGNFNTLAI--LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDG 401
D + + AI LR E +FKD++FWR+ +V D FW LP IDA YE+
Sbjct: 881 DPSLSLDAITSLRGETMIFKDRFFWRLHPQQV-DAELFLTKSFWPELPNRIDAAYEHPSH 1057
Query: 402 NFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
+ +F F+G K+W + GYP + LG I +A+ +ED GKT F G++ W
Sbjct: 1058DLIFIFRGRKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGNQVW 1237
Query: 461 RYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGK---EYWKFNNQILK 516
RY + MD YP+ I + GI + V+++NG+ YF+ G EY ++N+I++
Sbjct: 1238RYDDTNHIMDKDYPRLIEEDFPGIGDKVDA--VYEKNGYIYFFNGPIQFEYSIWSNRIVR 1411
Query: 517 VEP 519
V P
Sbjct: 1412VMP 1420
>gb|AF144758.1|AF144758 Bos taurus MT1-MMP protein (MMP-14) mRNA, partial cds
Length = 784
Score = 286 bits (732), Expect = 4e-75
Identities = 146/278 (52%), Positives = 179/278 (63%), Gaps = 4/278 (1%)
Frame = +2
Query: 112 KFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVP 171
K N+RRKRYA+ G KWQH IT+ I+N TPKVG+ T AIR+AF VW++ TPL F EVP
Sbjct: 38 KANVRRKRYAIQGLKWQHNEITFCIQNYTPKVGEYATFEAIRKAFRVWESATPLRFREVP 217
Query: 172 YSELENG-KRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTL 230
Y+ + G ++ DI I FA GFHGD + FDGEGGFLA AYFPGP + G
Sbjct: 218 YAYIREGHEKQADILIFFAEGFHGDITAFDGEGGFLALAYFPGPNLEG------------ 361
Query: 231 GNPNHD---GNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQ 287
G+P ++ GND+FLVAVHELGHALGLEHSNDP+AIMAPFYQ+M+T+NF LP+DD +GIQ
Sbjct: 362 GHPKNEDLNGNDIFLVAVHELGHALGLEHSNDPSAIMAPFYQWMDTENFVLPDDDRRGIQ 541
Query: 288 KIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNF 347
++YG SV PNICDGNF
Sbjct: 542 QLYGSKSGSPTKMPPQPRTTSRPSVPDKPKNPTYG-----------------PNICDGNF 670
Query: 348 NTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFW 385
+T+A+LR EM VFK++WFWRVR N+VMDGYPM I +W
Sbjct: 671 DTVAMLRGEMLVFKERWFWRVRKNQVMDGYPMPIGQYW 784
>dbj|D82055.1|D82055 Cynops pyrrhogaster mRNA for collagenase 3, complete cds
Length = 3981
Score = 286 bits (731), Expect = 5e-75
Identities = 174/488 (35%), Positives = 253/488 (51%), Gaps = 7/488 (1%)
Frame = +1
Query: 37 TEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWM 96
TEQ + K Y+ + + + S L MQ F+ + +TGK+D +T++ M
Sbjct: 106 TEQELRLAEKYLKTFYVASDHAGIMTKKGGNALASKLREMQSFFDLEVTGKLDEDTLEVM 285
Query: 97 KKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAF 156
K+PRCGVPD ++N+ + KW ++TY I+N TP + E RAI++AF
Sbjct: 286 KQPRCGVPDV----GEYNVFPRSL-----KWPRFNLTYRIENYTPDMTHAEVDRAIKKAF 438
Query: 157 DVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGI 216
VW VTPL F + L +G DI I F + HGD PFDG G LAHA+ PG I
Sbjct: 439 RVWSEVTPLNF-----TRLRSGT--ADIMISFGTKEHGDFYPFDGPNGLLAHAFPPGQRI 597
Query: 217 GGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNF 276
GGDTHFD DE +T G+ +G +LF+VA HE GHALGL+HS DP ++M P Y Y E F
Sbjct: 598 GGDTHFDDDETFTSGS---NGYNLFIVAAHEFGHALGLDHSRDPGSLMYPVYSYTEPSRF 768
Query: 277 KLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXX 336
LP+DD+QGIQ +YG
Sbjct: 769 LLPDDDVQGIQSLYGPGNRDPNPKHPKT-------------------------------- 852
Query: 337 GAKPNICDGNFNTLAI--LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDA 394
P CD + AI +R E +FKD++FWR ++ ++ D + I FW LP IDA
Sbjct: 853 ---PEKCDPELSLDAITEMRGEKLIFKDRFFWR-QHPQMTDVELVLIRNFWPELPSKIDA 1020
Query: 395 VYENSDGNFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYF 453
YE + + ++ F+G K+W + YP + LG ID+A++ +GKT F
Sbjct: 1021AYEYPEKDLIYIFRGRKFWALNGYDILADYPKKIQELGFPKSLRTIDAAVYNRAMGKTLF 1200
Query: 454 FKGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGK---EYWK 509
F G++YW + EE +T++ GYP+ I + GI E+ A+ + NG+ YF+ G EY
Sbjct: 1201FTGEKYWSFDEEKQTVEKGYPRFIADDFPGIGETVDAAY--QRNGYIYFFSGSLQFEYST 1374
Query: 510 FNNQILKV 517
++N++++V
Sbjct: 1375WSNKVIRV 1398
Score = 58.2 bits (139), Expect = 2e-06
Identities = 48/156 (30%), Positives = 72/156 (45%), Gaps = 9/156 (5%)
Frame = +1
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPH----DLITLGNGIP--PHGIDSAIW 444
S+DA+ E +G K +FKD +P +L+ + N P P ID+A
Sbjct: 877 SLDAITE--------MRGEKL-IFKDRFFWRQHPQMTDVELVLIRNFWPELPSKIDAAYE 1029
Query: 445 WEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYF 501
+ + Y F+G ++W + D YPK I G P+S + A ++ G T F
Sbjct: 1030 YPEKDLIYIFRGRKFWALNGYDILAD--YPKKIQEL-GFPKSLRTIDAAVYNRAMGKTLF 1200
Query: 502 YKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTD 537
+ G++YW F+ + VE GYPR I DF G D
Sbjct: 1201 FTGEKYWSFDEEKQTVEKGYPRFIADDFPGIGETVD 1308
>ref|NM_002426.1| Homo sapiens matrix metalloproteinase 12 (macrophage elastase)
(MMP12), mRNA
Length = 1778
Score = 286 bits (731), Expect = 5e-75
Identities = 171/473 (36%), Positives = 247/473 (52%), Gaps = 5/473 (1%)
Frame = +1
Query: 44 EVWLQK-YGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
E +L+K YG P + S M+ + MQ F G+ +TG++D +T++ M PRCG
Sbjct: 112 ERYLEKFYGLEINKLPVTKMKYSGNLMKEKIQEMQHFLGLKVTGQLDTSTLEMMHAPRCG 291
Query: 103 VPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNV 162
VPD + R G W+ +ITY I N TP + + AIR+AF VW NV
Sbjct: 292 VPD---------LHHFREMPGGPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNV 444
Query: 163 TPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPL F S++ G DI ++FA G HGD FDG+GG LAHA+ PG GIGGD HF
Sbjct: 445 TPLKF-----SKINTGM--ADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHF 603
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDD 282
D DE WT + G +LFL AVHE+GH+LGL HS+DP A+M P Y+Y++ + F+L DD
Sbjct: 604 DEDEFWTT---HSGGTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADD 774
Query: 283 LQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNI 342
++GIQ +YG ++P +
Sbjct: 775 IRGIQSLYG---------------------------------DPKENQRLPNPDNSEPAL 855
Query: 343 CDGN--FNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSD 400
CD N F+ + + ++F FKD++FW + R + I+ W LP I+A YE
Sbjct: 856 CDPNLSFDAVTTVGNKIFFFKDRFFWLKVSERPKTSVNL-ISSLWPTLPSGIEAAYEIEA 1032
Query: 401 GNFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
N VF FK +KYW+ + +P YP + + G ID+A++ +TYFF ++Y
Sbjct: 1033RNQVFLFKDDKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDNQY 1212
Query: 460 WRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
WRY E + MDPGYPK IT ++GI F + +N + YF++G ++++
Sbjct: 1213WRYDERRQMMDPGYPKLITKNFQGIGPKIDAVF-YSKNKYYYFFQGSNQFEYD 1368
Score = 60.8 bits (146), Expect = 4e-07
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Frame = +1
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGK 450
S DAV + GN +FF ++++ K + +P +LI+ P GI++A E +
Sbjct: 871 SFDAV--TTVGNKIFFFKDRFFWLK-VSERPKTSVNLISSLWPTLPSGIEAAYEIEARNQ 1041
Query: 451 TYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIP---ESPQGAFVHKENGFTYFYKGKEY 507
+ FK D+YW S +P YPK I + G P + A + TYF+ +Y
Sbjct: 1042 VFLFKDDKYWLISNLRP--EPNYPKSIHSF-GFPNFVKKIDAAVFNPRFYRTYFFVDNQY 1212
Query: 508 WKFNNQILKVEPGYPRSILKDFMG 531
W+++ + ++PGYP+ I K+F G
Sbjct: 1213 WRYDERRQMMDPGYPKLITKNFQG 1284
>gb|L23808.1|HUMHME Human metalloproteinase (HME) mRNA, complete cds
Length = 1778
Score = 286 bits (731), Expect = 5e-75
Identities = 171/473 (36%), Positives = 247/473 (52%), Gaps = 5/473 (1%)
Frame = +1
Query: 44 EVWLQK-YGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
E +L+K YG P + S M+ + MQ F G+ +TG++D +T++ M PRCG
Sbjct: 112 ERYLEKFYGLEINKLPVTKMKYSGNLMKEKIQEMQHFLGLKVTGQLDTSTLEMMHAPRCG 291
Query: 103 VPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNV 162
VPD + R G W+ +ITY I N TP + + AIR+AF VW NV
Sbjct: 292 VPD---------LHHFREMPGGPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNV 444
Query: 163 TPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPL F S++ G DI ++FA G HGD FDG+GG LAHA+ PG GIGGD HF
Sbjct: 445 TPLKF-----SKINTGM--ADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHF 603
Query: 223 DSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDD 282
D DE WT + G +LFL AVHE+GH+LGL HS+DP A+M P Y+Y++ + F+L DD
Sbjct: 604 DEDEFWTT---HSGGTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADD 774
Query: 283 LQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNI 342
++GIQ +YG ++P +
Sbjct: 775 IRGIQSLYG---------------------------------DPKENQRLPNPDNSEPAL 855
Query: 343 CDGN--FNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSD 400
CD N F+ + + ++F FKD++FW + R + I+ W LP I+A YE
Sbjct: 856 CDPNLSFDAVTTVGNKIFFFKDRFFWLKVSERPKTSVNL-ISSLWPTLPSGIEAAYEIEA 1032
Query: 401 GNFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
N VF FK +KYW+ + +P YP + + G ID+A++ +TYFF ++Y
Sbjct: 1033RNQVFLFKDDKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDNQY 1212
Query: 460 WRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
WRY E + MDPGYPK IT ++GI F + +N + YF++G ++++
Sbjct: 1213WRYDERRQMMDPGYPKLITKNFQGIGPKIDAVF-YSKNKYYYFFQGSNQFEYD 1368
Score = 60.8 bits (146), Expect = 4e-07
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Frame = +1
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGK 450
S DAV + GN +FF ++++ K + +P +LI+ P GI++A E +
Sbjct: 871 SFDAV--TTVGNKIFFFKDRFFWLK-VSERPKTSVNLISSLWPTLPSGIEAAYEIEARNQ 1041
Query: 451 TYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIP---ESPQGAFVHKENGFTYFYKGKEY 507
+ FK D+YW S +P YPK I + G P + A + TYF+ +Y
Sbjct: 1042 VFLFKDDKYWLISNLRP--EPNYPKSIHSF-GFPNFVKKIDAAVFNPRFYRTYFFVDNQY 1212
Query: 508 WKFNNQILKVEPGYPRSILKDFMG 531
W+++ + ++PGYP+ I K+F G
Sbjct: 1213 WRYDERRQMMDPGYPKLITKNFQG 1284
>gb|AF144760.1|AF144760 Bos taurus MT3-MMP protein (MMP-16) mRNA, partial cds
Length = 416
Score = 285 bits (729), Expect = 9e-75
Identities = 133/138 (96%), Positives = 137/138 (98%)
Frame = +2
Query: 17 HSGVFFLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAM 76
HSG+ +LQTLLWILCATVCGTEQYFNVEVWLQKYGYLPP+DPRMSVLRSAETMQSALAAM
Sbjct: 2 HSGILYLQTLLWILCATVCGTEQYFNVEVWLQKYGYLPPSDPRMSVLRSAETMQSALAAM 181
Query: 77 QQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSI 136
QQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSI
Sbjct: 182 QQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSI 361
Query: 137 KNVTPKVGDPETRRAIRR 154
KNVTPKVGDPETR+AIRR
Sbjct: 362 KNVTPKVGDPETRKAIRR 415
>gb|AF059201.1|AF059201 Oryctolagus cuniculus collagenase-3 precursor, mRNA, complete cds
Length = 3124
Score = 285 bits (728), Expect = 1e-74
Identities = 179/489 (36%), Positives = 247/489 (49%), Gaps = 7/489 (1%)
Frame = +1
Query: 38 EQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMK 97
E + E +L+ Y Y P + +A +M L MQ F+G+ +TGK+D NT+ MK
Sbjct: 766 EDFQFAESYLRSY-YHPLNPAGILKKNAAGSMVDRLREMQSFFGLEVTGKLDDNTLAIMK 942
Query: 98 KPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFD 157
+PRCGVPD ++N+ + KW ++TY I N TP + E +A ++AF
Sbjct: 943 QPRCGVPDV----GEYNVFPRTL-----KWSQTNLTYRIVNYTPDLTHSEVEKAFKKAFK 1095
Query: 158 VWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 217
VW +VTPL F + + NG DI I F + HGD PFDG G LAHA+ PGP G
Sbjct: 1096 VWSDVTPLNF-----TRIHNGT--ADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYG 1254
Query: 218 GDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFK 277
GD HFD DE WT + G +LFLVA HE GH+LGL+HS DP A+M P Y Y +F
Sbjct: 1255 GDAHFDDDETWTSSSK---GYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFM 1425
Query: 278 LPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXG 337
LP+DD+QGIQ +YG
Sbjct: 1426 LPDDDVQGIQSLYGPGDEDPNPKHPKT--------------------------------- 1506
Query: 338 AKPNICDGNFNTLAI--LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 395
P+ CD + + AI LR E +FKD++FWR+ +V D FW LP IDA
Sbjct: 1507 --PDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQV-DAELFLTKSFWPELPNRIDAA 1677
Query: 396 YENSDGNFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFF 454
YE+ + +F F+G K+W + GYP L LG I +A+ +ED GKT FF
Sbjct: 1678 YEHPARDLIFIFRGKKFWAPNGYDILEGYPQKLSELGFPREVKKISAAVHFEDTGKTLFF 1857
Query: 455 KGDRYWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGK---EYWKF 510
G++ W Y + TMD YP+ I + GI V+++NG+ YF+ G EY +
Sbjct: 1858 SGNQVWSYDDTNHTMDQDYPRLIEEEFPGIGGKVDA--VYEKNGYIYFFNGPIQFEYSIW 2031
Query: 511 NNQILKVEP 519
+ +I++V P
Sbjct: 2032 SKRIVRVMP 2058
>gb|AF148882.1|AF148882 Equus caballus matrix metalloproteinase 1 precursor (MMP1) mRNA,
complete cds
Length = 1923
Score = 284 bits (726), Expect = 2e-74
Identities = 175/482 (36%), Positives = 244/482 (50%), Gaps = 7/482 (1%)
Frame = +2
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+ Y L ++ R + L MQ+F+G+ +TGK D T++ MK+PRCG
Sbjct: 155 VQKYLENYYNLKSDGEQIEKQRHRSPVVEKLKQMQEFFGLKVTGKPDAETLNVMKQPRCG 334
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQ 160
VPD + LT +W++ H+TY I+N TP + + +AI +AF +W
Sbjct: 335 VPDVAE-----------FVLTEGNPRWENTHLTYRIENYTPDLPRADVDQAIEKAFQLWS 481
Query: 161 NVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
NV+PLTF +V + DI I F G H D+SPFDG GG LAHA+ PGP IGGD
Sbjct: 482 NVSPLTFTKVSEGQ-------ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPRIGGDA 640
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT N+ +L+ VA HE GH+LGL HS D A+M P Y T + +L
Sbjct: 641 HFDEDETWTSNFRNY---NLYRVAAHEFGHSLGLSHSTDIGALMYP--NYFFTGDVQLSQ 805
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ IYG P
Sbjct: 806 DDINGIQAIYGPSQNPIQPIGPQT-----------------------------------P 880
Query: 341 NICDG--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYEN 398
+CD F+ + +R E+ FKD+++ R+ N + I+ FW LP + A YE
Sbjct: 881 EVCDSKLTFDAITTIRGEVMFFKDRFYMRI-NPYYPEAELNFISIFWPQLPNGLQAAYEV 1057
Query: 399 SDGNFV-FFKGNKYWVFKDTTLQPGYPHDL-ITLGNGIPPHGIDSAIWWEDVGKTYFFKG 456
S + V FFKGNKYW K + GYP D+ + G ID+A+ ED GKTYFF
Sbjct: 1058SHRDEVRFFKGNKYWAVKGQDVLYGYPKDIHRSFGFPSTVKNIDAAVSEEDTGKTYFFVA 1237
Query: 457 DRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQIL 515
D+YWRY E ++MD GYPK I + GI + F +++GF YF+ G +KF+ +
Sbjct: 1238DKYWRYDEYKRSMDAGYPKMIADDFPGIGDKVDAVF--QKDGFFYFFHGTRQYKFDPKTK 1411
Query: 516 KV 517
++
Sbjct: 1412RI 1417
Score = 58.9 bits (141), Expect = 1e-06
Identities = 42/145 (28%), Positives = 66/145 (44%), Gaps = 8/145 (5%)
Frame = +2
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPH---DLITLGNGIPPHGIDSAIWWEDVGKTYFFKGD 457
G +FFK Y + P YP + I++ P+G+ +A + FFKG+
Sbjct: 929 GEVMFFKDRFYM-----RINPYYPEAELNFISIFWPQLPNGLQAAYEVSHRDEVRFFKGN 1093
Query: 458 RYWRYSEEMKTMDP--GYPKPITIWKGIPESPQG---AFVHKENGFTYFYKGKEYWKFNN 512
+YW +K D GYPK I G P + + A ++ G TYF+ +YW+++
Sbjct: 1094 KYWA----VKGQDVLYGYPKDIHRSFGFPSTVKNIDAAVSEEDTGKTYFFVADKYWRYDE 1261
Query: 513 QILKVEPGYPRSILKDFMGCDGPTD 537
++ GYP+ I DF G D
Sbjct: 1262 YKRSMDAGYPKMIADDFPGIGDKVD 1336
>gb|M60616.1|RATCOL Rat collagenase (UMRCase) mRNA, 3' end
Length = 2607
Score = 284 bits (726), Expect = 2e-74
Identities = 172/483 (35%), Positives = 246/483 (50%), Gaps = 7/483 (1%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+ Y Y P T + + + L MQ F+G+++TGK+D T+D M+KPRCGV
Sbjct: 104 EHYLKSY-YHPVTLAGILKKSTVTSTVDRLREMQSFFGLDVTGKLDDPTLDIMRKPRCGV 280
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVT 163
PD +N+ + KW ++TY I N TP + E +A R+AF VW +VT
Sbjct: 281 PDV----GVYNVFPRTL-----KWSQTNLTYRIVNYTPDISHSEVEKAFRKAFKVWSDVT 433
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PL F + + +G DI I F + HGD PFDG G LAHA+ PGP +GGD HFD
Sbjct: 434 PLNF-----TRIHDGT--ADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNLGGDAHFD 592
Query: 224 SDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDL 283
DE WT + G +LF+VA HELGH+LGL+HS DP A+M P Y Y +F LP+DD+
Sbjct: 593 DDETWTSSSK---GYNLFIVAAHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDV 763
Query: 284 QGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNIC 343
QGIQ +YG P C
Sbjct: 764 QGIQSLYGPGDEDPNPKHPKT-----------------------------------PEKC 838
Query: 344 DG--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDG 401
D + + + LR E +FKD++FWR+ +V + FW LP +DA YE+
Sbjct: 839 DPALSLDAITSLRGETMIFKDRFFWRLHPQQV-EPELFLTKSFWPELPNHVDAAYEHPSR 1015
Query: 402 NFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
+ +F F+G K+W + GYP + LG + +A+ +ED GKT FF G+ W
Sbjct: 1016DLMFIFRGRKFWALNGYDIMEGYPRKISDLGFPKEVKRLSAAVHFEDTGKTLFFSGNHVW 1195
Query: 461 RYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGK---EYWKFNNQILK 516
Y + +TMD YP+ I + GI + V+++NG+ YF+ G EY ++N+I++
Sbjct: 1196SYDDANQTMDKDYPRLIEEEFPGIGDKVDA--VYEKNGYIYFFNGPIQFEYSIWSNRIVR 1369
Query: 517 VEP 519
V P
Sbjct: 1370VMP 1378
Score = 43.5 bits (101), Expect = 0.061
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 5/152 (3%)
Frame = +2
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIP--PHGIDSAIWWEDV 448
S+DA+ + G + FK +W ++P +L + P P+ +D+A
Sbjct: 851 SLDAI-TSLRGETMIFKDRFFWRLHPQQVEP----ELFLTKSFWPELPNHVDAAYEHPSR 1015
Query: 449 GKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQ--GAFVHKEN-GFTYFYKGK 505
+ F+G ++W + + GYP+ I+ G P+ + A VH E+ G T F+ G
Sbjct: 1016DLMFIFRGRKFWALNGY--DIMEGYPRKISDL-GFPKEVKRLSAAVHFEDTGKTLFFSGN 1186
Query: 506 EYWKFNNQILKVEPGYPRSILKDFMGCDGPTD 537
W +++ ++ YPR I ++F G D
Sbjct: 1187HVWSYDDANQTMDKDYPRLIEEEFPGIGDKVD 1282
>emb|X54925.1|HSCOLL1 H.sapiens mRNA for type I interstitial collagenase
Length = 1970
Score = 283 bits (723), Expect = 5e-74
Identities = 176/483 (36%), Positives = 247/483 (50%), Gaps = 8/483 (1%)
Frame = +3
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+KY L ++ R++ + L MQ+F+G+ +TGK D T+ MK+PRCG
Sbjct: 168 VQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCG 347
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQ 160
VPD + + LT +W+ H+TY I+N TP + + AI +AF +W
Sbjct: 348 VPDVAQ-----------FVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWS 494
Query: 161 NVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
NVTPLTF +V + DI I F G H D+SPFDG GG LAHA+ PGPGIGGD
Sbjct: 495 NVTPLTFTKVSEGQ-------ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDA 653
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT N +L VA HELGH+LGL HS D A+M P Y + + + +L
Sbjct: 654 HFDEDERWT---NNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--SGDVQLAQ 818
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ IYG P
Sbjct: 819 DDIDGIQAIYGRSQNPVQPIGPQT-----------------------------------P 893
Query: 341 NICDG--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAVYE 397
CD F+ + +R E+ FKD+++ +R N + I+ FW LP ++A YE
Sbjct: 894 KACDSKLTFDAITTIRGEVMFFKDRFY--MRTNPFYPEVELNFISVFWPQLPNGLEAAYE 1067
Query: 398 NSDGNFV-FFKGNKYWVFKDTTLQPGYPHDLI-TLGNGIPPHGIDSAIWWEDVGKTYFFK 455
+D + V FFKGNKYW + + GYP D+ + G ID+A+ E+ GKTYFF
Sbjct: 1068FADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFV 1247
Query: 456 GDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
++YWRY E ++MDPGYPK I + GI F+ ++GF YF+ G +KF+ +
Sbjct: 1248ANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFM--KDGFFYFFHGTRQYKFDPKT 1421
Query: 515 LKV 517
++
Sbjct: 1422KRI 1430
Score = 66.2 bits (160), Expect = 9e-09
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Frame = +3
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
G +FFK Y + P + I++ P+G+++A + D + FFKG++YW
Sbjct: 942 GEVMFFKDRFY--MRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYW 1115
Query: 461 RYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEYWKFNNQILKV 517
+ + + + GYPK I G P + + A + G TYF+ +YW+++ +
Sbjct: 1116 --AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSM 1289
Query: 518 EPGYPRSILKDFMGCDGPTD 537
+PGYP+ I DF G D
Sbjct: 1290 DPGYPKMIAHDFPGIGHKVD 1349
>ref|NM_002421.2| Homo sapiens matrix metalloproteinase 1 (interstitial collagenase)
(MMP1), mRNA
Length = 1973
Score = 283 bits (723), Expect = 5e-74
Identities = 176/483 (36%), Positives = 247/483 (50%), Gaps = 8/483 (1%)
Frame = +3
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+KY L ++ R++ + L MQ+F+G+ +TGK D T+ MK+PRCG
Sbjct: 171 VQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCG 350
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQ 160
VPD + + LT +W+ H+TY I+N TP + + AI +AF +W
Sbjct: 351 VPDVAQ-----------FVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWS 497
Query: 161 NVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
NVTPLTF +V + DI I F G H D+SPFDG GG LAHA+ PGPGIGGD
Sbjct: 498 NVTPLTFTKVSEGQ-------ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDA 656
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT N +L VA HELGH+LGL HS D A+M P Y + + + +L
Sbjct: 657 HFDEDERWT---NNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--SGDVQLAQ 821
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ IYG P
Sbjct: 822 DDIDGIQAIYGRSQNPVQPIGPQT-----------------------------------P 896
Query: 341 NICDG--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAVYE 397
CD F+ + +R E+ FKD+++ +R N + I+ FW LP ++A YE
Sbjct: 897 KACDSKLTFDAITTIRGEVMFFKDRFY--MRTNPFYPEVELNFISVFWPQLPNGLEAAYE 1070
Query: 398 NSDGNFV-FFKGNKYWVFKDTTLQPGYPHDLI-TLGNGIPPHGIDSAIWWEDVGKTYFFK 455
+D + V FFKGNKYW + + GYP D+ + G ID+A+ E+ GKTYFF
Sbjct: 1071FADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFV 1250
Query: 456 GDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
++YWRY E ++MDPGYPK I + GI F+ ++GF YF+ G +KF+ +
Sbjct: 1251ANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFM--KDGFFYFFHGTRQYKFDPKT 1424
Query: 515 LKV 517
++
Sbjct: 1425KRI 1433
Score = 66.2 bits (160), Expect = 9e-09
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Frame = +3
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
G +FFK Y + P + I++ P+G+++A + D + FFKG++YW
Sbjct: 945 GEVMFFKDRFY--MRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYW 1118
Query: 461 RYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEYWKFNNQILKV 517
+ + + + GYPK I G P + + A + G TYF+ +YW+++ +
Sbjct: 1119 --AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSM 1292
Query: 518 EPGYPRSILKDFMGCDGPTD 537
+PGYP+ I DF G D
Sbjct: 1293 DPGYPKMIAHDFPGIGHKVD 1352
>dbj|AK024818.1|AK024818 Homo sapiens cDNA: FLJ21165 fis, clone CAS10833, highly similar to
HSCOLL1 Homo sapiens mRNA for type I interstitial
collagenase
Length = 1988
Score = 283 bits (723), Expect = 5e-74
Identities = 176/483 (36%), Positives = 247/483 (50%), Gaps = 8/483 (1%)
Frame = +1
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+KY L ++ R++ + L MQ+F+G+ +TGK D T+ MK+PRCG
Sbjct: 166 VQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCG 345
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQ 160
VPD + + LT +W+ H+TY I+N TP + + AI +AF +W
Sbjct: 346 VPDVAQ-----------FVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWS 492
Query: 161 NVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
NVTPLTF +V + DI I F G H D+SPFDG GG LAHA+ PGPGIGGD
Sbjct: 493 NVTPLTFTKVSEGQ-------ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDA 651
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT N +L VA HELGH+LGL HS D A+M P Y + + + +L
Sbjct: 652 HFDEDERWT---NNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--SGDVQLAQ 816
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ IYG P
Sbjct: 817 DDIDGIQAIYGRSQNPVQPIGPQT-----------------------------------P 891
Query: 341 NICDG--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAVYE 397
CD F+ + +R E+ FKD+++ +R N + I+ FW LP ++A YE
Sbjct: 892 KACDSKLTFDAITTIRGEVMFFKDRFY--MRTNPFYPEVELNFISVFWPQLPNGLEAAYE 1065
Query: 398 NSDGNFV-FFKGNKYWVFKDTTLQPGYPHDLI-TLGNGIPPHGIDSAIWWEDVGKTYFFK 455
+D + V FFKGNKYW + + GYP D+ + G ID+A+ E+ GKTYFF
Sbjct: 1066FADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFV 1245
Query: 456 GDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
++YWRY E ++MDPGYPK I + GI F+ ++GF YF+ G +KF+ +
Sbjct: 1246ANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFM--KDGFFYFFHGTRQYKFDPKT 1419
Query: 515 LKV 517
++
Sbjct: 1420KRI 1428
Score = 66.2 bits (160), Expect = 9e-09
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Frame = +1
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
G +FFK Y + P + I++ P+G+++A + D + FFKG++YW
Sbjct: 940 GEVMFFKDRFY--MRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYW 1113
Query: 461 RYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEYWKFNNQILKV 517
+ + + + GYPK I G P + + A + G TYF+ +YW+++ +
Sbjct: 1114 --AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSM 1287
Query: 518 EPGYPRSILKDFMGCDGPTD 537
+PGYP+ I DF G D
Sbjct: 1288 DPGYPKMIAHDFPGIGHKVD 1347
>gb|BC013875.1|BC013875 Homo sapiens, Similar to matrix metalloproteinase 1 (interstitial
collagenase), clone MGC:10479 IMAGE:3834572, mRNA,
complete cds
Length = 2057
Score = 283 bits (723), Expect = 5e-74
Identities = 176/483 (36%), Positives = 247/483 (50%), Gaps = 8/483 (1%)
Frame = +1
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+KY L ++ R++ + L MQ+F+G+ +TGK D T+ MK+PRCG
Sbjct: 151 VQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCG 330
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQ 160
VPD + + LT +W+ H+TY I+N TP + + AI +AF +W
Sbjct: 331 VPDVAQ-----------FVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWS 477
Query: 161 NVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
NVTPLTF +V + DI I F G H D+SPFDG GG LAHA+ PGPGIGGD
Sbjct: 478 NVTPLTFTKVSEGQ-------ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDA 636
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT N +L VA HELGH+LGL HS D A+M P Y + + + +L
Sbjct: 637 HFDEDERWT---NNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--SGDVQLAQ 801
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ IYG P
Sbjct: 802 DDIDGIQAIYGRSQNPVQPIGPQT-----------------------------------P 876
Query: 341 NICDG--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAVYE 397
CD F+ + +R E+ FKD+++ +R N + I+ FW LP ++A YE
Sbjct: 877 KACDSKLTFDAITTIRGEVMFFKDRFY--MRTNPFYPEVELNFISVFWPQLPNGLEAAYE 1050
Query: 398 NSDGNFV-FFKGNKYWVFKDTTLQPGYPHDLI-TLGNGIPPHGIDSAIWWEDVGKTYFFK 455
+D + V FFKGNKYW + + GYP D+ + G ID+A+ E+ GKTYFF
Sbjct: 1051FADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFV 1230
Query: 456 GDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
++YWRY E ++MDPGYPK I + GI F+ ++GF YF+ G +KF+ +
Sbjct: 1231ANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFM--KDGFFYFFHGTRQYKFDPKT 1404
Query: 515 LKV 517
++
Sbjct: 1405KRI 1413
Score = 66.2 bits (160), Expect = 9e-09
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Frame = +1
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
G +FFK Y + P + I++ P+G+++A + D + FFKG++YW
Sbjct: 925 GEVMFFKDRFY--MRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYW 1098
Query: 461 RYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEYWKFNNQILKV 517
+ + + + GYPK I G P + + A + G TYF+ +YW+++ +
Sbjct: 1099 --AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSM 1272
Query: 518 EPGYPRSILKDFMGCDGPTD 537
+PGYP+ I DF G D
Sbjct: 1273 DPGYPKMIAHDFPGIGHKVD 1332
>gb|L49412.1|XELMMP1G Xenopus laevis collagenase 3 (MMP-13) mRNA, 3' end of cds
Length = 2850
Score = 282 bits (722), Expect = 6e-74
Identities = 170/462 (36%), Positives = 243/462 (51%), Gaps = 7/462 (1%)
Frame = +1
Query: 63 LRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYAL 122
+++ ++++ L MQ F+G+ +TGK++ +T+D MK+PRCGVPD G F R+
Sbjct: 166 MKNVNSIETKLKEMQSFFGLEVTGKLNEDTLDIMKQPRCGVPDV--GQYNFFPRKL---- 327
Query: 123 TGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDV 182
KW ++TY I N TP + E RAI++A VW +VTPL F + L G
Sbjct: 328 ---KWPRNNLTYRIVNYTPDLSTSEVDRAIKKALKVWSDVTPLNF-----TRLRTGT--A 477
Query: 183 DITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFL 242
DI + F HGD PFDG G LAHA+ PG +GGDTHFD DE ++ N G +LF+
Sbjct: 478 DIMVSFGKKEHGDYYPFDGPDGLLAHAFPPGEKLGGDTHFDDDEMFSTDNK---GYNLFV 648
Query: 243 VAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXX 302
VA HE GHALGL+HS DP ++M P Y Y ET F LP+DD+QGIQ +YG
Sbjct: 649 VAAHEFGHALGLDHSRDPGSLMFPVYTYTETSRFVLPDDDVQGIQVLYGPGNRDPHPKHP 828
Query: 303 XXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAI--LRREMFVF 360
P CD + + AI LR E +F
Sbjct: 829 KT-----------------------------------PEKCDPDLSIDAITELRGEKMIF 903
Query: 361 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF-FKGNKYWVFKDTTL 419
KD++FWRV + ++ D + I FW LP +DA YE+ + + F+G K+W +
Sbjct: 904 KDRFFWRV-HPQMTDAELVLIKSFWPELPNKLDAAYEHPAKDLSYLFRGKKFWALNGYDI 1080
Query: 420 QPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT- 478
YP L LG ID+A++ +D GKT+FF D YW + EE +T+D G+P+ I+
Sbjct: 1081VEDYPKKLHELGFPKTLKAIDAAVYNKDTGKTFFFTEDSYWSFDEEARTLDKGFPRLISE 1260
Query: 479 IWKGIPESPQGAFVHKENGFTYFYKGK---EYWKFNNQILKV 517
+ GI E A+ + NG+ YF+ G EY ++ +I ++
Sbjct: 1261DFPGIGEKVDAAY--QRNGYLYFFNGALQFEYSIWSQRITRI 1380
>gb|U41824.1|XLU41824 Xenopus laevis collagenase-3 (gene A) mRNA, complete cds
Length = 2960
Score = 282 bits (722), Expect = 6e-74
Identities = 171/462 (37%), Positives = 240/462 (51%), Gaps = 7/462 (1%)
Frame = +1
Query: 63 LRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYAL 122
++ ++++ L MQ F+G+ +TGK++ +T+D MK+PRCGVPD G F R+
Sbjct: 184 MKDVNSVETKLKEMQSFFGLEVTGKLNEDTLDIMKQPRCGVPDV--GQYNFFPRKL---- 345
Query: 123 TGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDV 182
KW ++TY I N TP + + RAI++A VW +VTPL F + L G
Sbjct: 346 ---KWPRNNLTYRIVNYTPDLSTSDVDRAIKKALKVWSDVTPLNF-----TRLRTGT--A 495
Query: 183 DITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFL 242
DI + F HGD PFDG G LAHA+ PG IGGDTHFD DE ++ N G +LF+
Sbjct: 496 DIMVAFGKKEHGDYYPFDGPDGLLAHAFPPGEKIGGDTHFDDDEMFSTDNK---GYNLFV 666
Query: 243 VAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXX 302
VA HE GHALGL+HS DP ++M P Y Y ET F LP+DD+QGIQ +YG
Sbjct: 667 VAAHEFGHALGLDHSRDPGSLMFPVYTYTETSRFVLPDDDVQGIQALYGSGNRDPHPKHP 846
Query: 303 XXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAI--LRREMFVF 360
P CD + AI LR E +F
Sbjct: 847 KT-----------------------------------PEKCDPDLTIDAITELRGEKMIF 921
Query: 361 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF-FKGNKYWVFKDTTL 419
KD++FWRV + ++ D + I FW LP IDA YE+ + ++ F+G K+W
Sbjct: 922 KDRFFWRV-HPQMTDAELVLIKSFWPELPNKIDAAYEHPAKDLIYIFRGKKFWALNGYDF 1098
Query: 420 QPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT- 478
YP L LG ID+A++ + +GKT FF D YW + EE +TMD G+P+ I+
Sbjct: 1099VEDYPKKLHELGFPKTLKAIDAAVYNKAIGKTLFFAEDSYWSFDEEARTMDKGFPRLISE 1278
Query: 479 IWKGIPESPQGAFVHKENGFTYFYKGK---EYWKFNNQILKV 517
+ GI E A+ + NG+ YF+ G EY ++ +I ++
Sbjct: 1279DFPGIGEKVDAAY--QRNGYIYFFNGALQFEYSIWSKRITRI 1398
>emb|X54724.1|SSMMP1 Porcine mmp1 mRNA for matrix metalloproteinase (type I collagenase)
(EC 3.4.24.7)
Length = 1336
Score = 282 bits (721), Expect = 8e-74
Identities = 176/476 (36%), Positives = 242/476 (49%), Gaps = 7/476 (1%)
Frame = +2
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+ Y L + R++ + L MQQF+G+ +TGK D T++ MK+PRCG
Sbjct: 29 VQKYLKNYYNLNSDGVPVEKKRNSGLVVEKLKQMQQFFGLKVTGKPDAETLNVMKQPRCG 208
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQ 160
VPD + LT +W++ H+TY I+N TP + + RAI +AF +W
Sbjct: 209 VPDVAE-----------FVLTPGNPRWENTHLTYRIENYTPDLSREDVDRAIEKAFQLWS 355
Query: 161 NVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
NV+PLTF +V + DI I F G H D+SPFDG GG LAHA+ PGPGIGGD
Sbjct: 356 NVSPLTFTKVSEGQ-------ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDA 514
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT N +L+ VA HELGH+LGL HS D A+M P Y Y T + +L
Sbjct: 515 HFDEDERWT---KNFRDYNLYRVAAHELGHSLGLSHSTDIGALMYPNYIY--TGDVQLSQ 679
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ IYG P
Sbjct: 680 DDIDGIQAIYGPSENPVQPSGPQT-----------------------------------P 754
Query: 341 NICDG--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYEN 398
+CD F+ + LR E+ FKD+++ R N+ + I+ FW +P + A YE
Sbjct: 755 QVCDSKLTFDAITTLRGELMFFKDRFYMRT-NSFYPEVELNFISVFWPQVPNGLQAAYEI 931
Query: 399 SDGNFV-FFKGNKYWVFKDTTLQPGYPHDL-ITLGNGIPPHGIDSAIWWEDVGKTYFFKG 456
+D + V FFKGNKYW + + GYP D+ + G ID+A++ ED GKTYFF
Sbjct: 932 ADRDEVRFFKGNKYWAVRGQDVLYGYPKDIHRSFGFPSTVKNIDAAVFEEDTGKTYFFVA 1111
Query: 457 DRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
WRY E ++MD GYPK I + GI F +++GF YF+ G ++F+
Sbjct: 1112HECWRYDEYKQSMDTGYPKMIAEEFPGIGNKVDAVF--QKDGFLYFFHGTRQYQFD 1273
Score = 58.9 bits (141), Expect = 1e-06
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Frame = +2
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
G +FFK Y + + P + I++ P+G+ +A D + FFKG++YW
Sbjct: 803 GELMFFKDRFY--MRTNSFYPEVELNFISVFWPQVPNGLQAAYEIADRDEVRFFKGNKYW 976
Query: 461 RYSEEMKTMDPGYPKPITIWKGIPESPQG---AFVHKENGFTYFYKGKEYWKFNNQILKV 517
+ GYPK I G P + + A ++ G TYF+ E W+++ +
Sbjct: 977 AVRGQDVLY--GYPKDIHRSFGFPSTVKNIDAAVFEEDTGKTYFFVAHECWRYDEYKQSM 1150
Query: 518 EPGYPRSILKDFMGCDGPTD 537
+ GYP+ I ++F G D
Sbjct: 1151DTGYPKMIAEEFPGIGNKVD 1210
>emb|X05083.1|RNTRAN2R RAT mRNA for oncogene-induced transin-2
Length = 1708
Score = 282 bits (721), Expect = 8e-74
Identities = 174/471 (36%), Positives = 237/471 (49%), Gaps = 5/471 (1%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L+KY + + + + + + MQ+F G+ MTGK+D NT++ M KPRCGVPD
Sbjct: 143 YLEKYYNFRKNEKQFFKRKDSSPVVKKIEEMQKFLGLEMTGKLDSNTVEMMHKPRCGVPD 322
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
G S F KW+ HI+Y I N T + AI RA VW+ VTPL
Sbjct: 323 -VGGFSTFP--------GSPKWRKNHISYRIVNYTLDLPRESVDSAIERALKVWEEVTPL 475
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
TF + E DI I FA G HGD PFDG G LAHAY PGPG GD HFD D
Sbjct: 476 TFSRISEGE-------ADIMISFAVGEHGDFYPFDGVGQSLAHAYPPGPGFYGDAHFDDD 634
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD-NFKLPNDDLQ 284
E W+LG G +LFLVA HELGH+LGL HSN+ ++M P Y++ + N +L DD++
Sbjct: 635 EKWSLG---PSGTNLFLVAAHELGHSLGLFHSNNKESLMYPVYRFSTSQANIRLSQDDIE 805
Query: 285 GIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICD 344
GIQ +YG P CD
Sbjct: 806 GIQSLYGARPSSDATVVPVPSVSPKPET---------------------------PVKCD 904
Query: 345 G--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE-NSDG 401
+F+ + +LR E FKD+ FWR + + I+ FW LP +DA YE N+
Sbjct: 905 PALSFDAVTMLRGEFLFFKDRHFWRRTQWNPEPEFHL-ISAFWPSLPSGLDAAYEANNKD 1081
Query: 402 NFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWR 461
+ FKG+++W + +Q GYP + TLG ID+A++ ++ KTYFF GD+YWR
Sbjct: 1082RVLIFKGSQFWAVRGNEVQAGYPKRIHTLGFPPTVKKIDAAVFEKEKKKTYFFVGDKYWR 1261
Query: 462 YSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
+ E + MD G+P+ IT + GI PQ V GF YF+ G ++F+
Sbjct: 1262FDETRQLMDKGFPRLITDDFPGI--EPQVDAVLHAFGFFYFFCGSSQFEFD 1408
Score = 65.1 bits (157), Expect = 2e-08
Identities = 43/140 (30%), Positives = 65/140 (45%), Gaps = 3/140 (2%)
Frame = +2
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
G F+FFK +W + T P LI+ P G+D+A + + FKG ++W
Sbjct: 941 GEFLFFKDRHFW--RRTQWNPEPEFHLISAFWPSLPSGLDAAYEANNKDRVLIFKGSQFW 1114
Query: 461 RYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEYWKFNNQILKV 517
+ + GYPK I G P + + A KE TYF+ G +YW+F+ +
Sbjct: 1115 --AVRGNEVQAGYPKRIHTL-GFPPTVKKIDAAVFEKEKKKTYFFVGDKYWRFDETRQLM 1285
Query: 518 EPGYPRSILKDFMGCDGPTD 537
+ G+PR I DF G + D
Sbjct: 1286 DKGFPRLITDDFPGIEPQVD 1345
>gb|M65253.1|RATTAP34A Rat transformation-associated protein (34A) mRNA, complete cds
Length = 1717
Score = 282 bits (721), Expect = 8e-74
Identities = 174/471 (36%), Positives = 237/471 (49%), Gaps = 5/471 (1%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L+KY + + + + + + MQ+F G+ MTGK+D NT++ M KPRCGVPD
Sbjct: 146 YLEKYYNFRKNEKQFFKRKDSSPVVKKIEEMQKFLGLEMTGKLDSNTVEMMHKPRCGVPD 325
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
G S F KW+ HI+Y I N T + AI RA VW+ VTPL
Sbjct: 326 -VGGFSTFP--------GSPKWRKNHISYRIVNYTLDLPRESVDSAIERALKVWEEVTPL 478
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
TF + E DI I FA G HGD PFDG G LAHAY PGPG GD HFD D
Sbjct: 479 TFSRISEGE-------ADIMISFAVGEHGDFYPFDGVGQSLAHAYPPGPGFYGDAHFDDD 637
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD-NFKLPNDDLQ 284
E W+LG G +LFLVA HELGH+LGL HSN+ ++M P Y++ + N +L DD++
Sbjct: 638 EKWSLG---PSGTNLFLVAAHELGHSLGLFHSNNKESLMYPVYRFSTSQANIRLSQDDIE 808
Query: 285 GIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICD 344
GIQ +YG P CD
Sbjct: 809 GIQSLYGARPSSDATVVPVPSVSPKPET---------------------------PVKCD 907
Query: 345 G--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE-NSDG 401
+F+ + +LR E FKD+ FWR + + I+ FW LP +DA YE N+
Sbjct: 908 PALSFDAVTMLRGEFLFFKDRHFWRRTQWNPEPEFHL-ISAFWPSLPSGLDAAYEANNKD 1084
Query: 402 NFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWR 461
+ FKG+++W + +Q GYP + TLG ID+A++ ++ KTYFF GD+YWR
Sbjct: 1085RVLIFKGSQFWAVRGNEVQAGYPKRIHTLGFPPTVKKIDAAVFEKEKKKTYFFVGDKYWR 1264
Query: 462 YSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
+ E + MD G+P+ IT + GI PQ V GF YF+ G ++F+
Sbjct: 1265FDETRQLMDKGFPRLITDDFPGI--EPQVDAVLHAFGFFYFFCGSSQFEFD 1411
Score = 65.1 bits (157), Expect = 2e-08
Identities = 43/140 (30%), Positives = 65/140 (45%), Gaps = 3/140 (2%)
Frame = +2
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
G F+FFK +W + T P LI+ P G+D+A + + FKG ++W
Sbjct: 944 GEFLFFKDRHFW--RRTQWNPEPEFHLISAFWPSLPSGLDAAYEANNKDRVLIFKGSQFW 1117
Query: 461 RYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEYWKFNNQILKV 517
+ + GYPK I G P + + A KE TYF+ G +YW+F+ +
Sbjct: 1118 --AVRGNEVQAGYPKRIHTL-GFPPTVKKIDAAVFEKEKKKTYFFVGDKYWRFDETRQLM 1288
Query: 518 EPGYPRSILKDFMGCDGPTD 537
+ G+PR I DF G + D
Sbjct: 1289 DKGFPRLITDDFPGIEPQVD 1348
>gb|J03209.1|HUMMMP3A Human matrix metalloproteinase-3 (MMP-3) mRNA, complete cds
Length = 1434
Score = 281 bits (718), Expect = 2e-73
Identities = 180/508 (35%), Positives = 253/508 (49%), Gaps = 16/508 (3%)
Frame = +1
Query: 26 LLWILCATVC----------GTEQYFN-VEVWLQKYGYLPPTDPRMSVLRSAETMQSALA 74
+L +LC VC G + N V+ +L+ Y L + + + + +
Sbjct: 16 ILLLLCVAVCSAYPLDGAARGEDTSMNLVQKYLENYYDLEKDVKQFVRRKDSGPVVKKIR 195
Query: 75 AMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITY 134
MQ+F G+ +TGK+D +T++ M+KPRCGVPD + I KW+ H+TY
Sbjct: 196 EMQKFLGLEVTGKLDSDTLEVMRKPRCGVPDVGHFRTFPGI---------PKWRKTHLTY 348
Query: 135 SIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHG 194
I N TP + A+ +A VW+ VTPLTF S L G + DI I FA HG
Sbjct: 349 RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTF-----SRLYEG--EADIMISFAVREHG 507
Query: 195 DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGL 254
D PFDG G LAHAY PGPGI GD HFD DE WT + G +LFLVA HE+GH+LGL
Sbjct: 508 DFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT---KDTTGTNLFLVAAHEIGHSLGL 678
Query: 255 EHSNDPTAIMAPFYQYM-ETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVX 313
HS + A+M P Y + + F+L DD+ GIQ +YG
Sbjct: 679 FHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGPPPDSPETPLVPTEPVPPEP-- 852
Query: 314 XXXXXXXXXXXXXXXXXXXXXXXGAKPNICDG--NFNTLAILRREMFVFKDQWFWRVRNN 371
P CD +F+ ++ LR E+ +FKD+ FWR ++
Sbjct: 853 ------------------------GTPANCDPALSFDAVSTLRGEILIFKDRHFWR-KSL 957
Query: 372 RVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF-FKGNKYWVFKDTTLQPGYPHDLITL 430
R ++ I+ FW LP +DA YE + + VF FKGN++W + ++ GYP + TL
Sbjct: 958 RKLEPELHLISSFWPSLPSGVDAAYEVTSKDLVFIFKGNQFWAIRGNEVRAGYPRGIHTL 1137
Query: 431 GNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQG 489
G ID+AI ++ KTYFF D+YWR+ E+ +M+PG+PK I + GI
Sbjct: 1138GFPPTVRKIDAAISDKEKNKTYFFVEDKYWRFDEKRNSMEPGFPKQIAEDFPGIDSKIDA 1317
Query: 490 AFVHKENGFTYFYKGKEYWKFNNQILKV 517
F +E GF YF+ G +F+ KV
Sbjct: 1318VF--EEFGFFYFFTGSSQLEFDPNAKKV 1395
Score = 63.2 bits (152), Expect = 7e-08
Identities = 46/153 (30%), Positives = 72/153 (46%), Gaps = 6/153 (3%)
Frame = +1
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIP--PHGIDSAIWWEDV 448
S DAV G + FK +W L+P +L + + P P G+D+A
Sbjct: 883 SFDAV-STLRGEILIFKDRHFWRKSLRKLEP----ELHLISSFWPSLPSGVDAAYEVTSK 1047
Query: 449 GKTYFFKGDRYWRY-SEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKG 504
+ FKG+++W E++ GYP+ I G P + + A KE TYF+
Sbjct: 1048 DLVFIFKGNQFWAIRGNEVRA---GYPRGIHTL-GFPPTVRKIDAAISDKEKNKTYFFVE 1215
Query: 505 KEYWKFNNQILKVEPGYPRSILKDFMGCDGPTD 537
+YW+F+ + +EPG+P+ I +DF G D D
Sbjct: 1216 DKYWRFDEKRNSMEPGFPKQIAEDFPGIDSKID 1314
>emb|X05232.1|HSSTROMR Human mRNA for stromelysin
Length = 1801
Score = 281 bits (718), Expect = 2e-73
Identities = 180/508 (35%), Positives = 253/508 (49%), Gaps = 16/508 (3%)
Frame = +2
Query: 26 LLWILCATVC----------GTEQYFN-VEVWLQKYGYLPPTDPRMSVLRSAETMQSALA 74
+L +LC VC G + N V+ +L+ Y L + + + + +
Sbjct: 59 ILLLLCVAVCSAYPLDGAARGEDTSMNLVQKYLENYYDLKKDVKQFVRRKDSGPVVKKIR 238
Query: 75 AMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITY 134
MQ+F G+ +TGK+D +T++ M+KPRCGVPD + I KW+ H+TY
Sbjct: 239 EMQKFLGLEVTGKLDSDTLEVMRKPRCGVPDVGHFRTFPGI---------PKWRKTHLTY 391
Query: 135 SIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHG 194
I N TP + A+ +A VW+ VTPLTF S L G + DI I FA HG
Sbjct: 392 RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTF-----SRLYEG--EADIMISFAVREHG 550
Query: 195 DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGL 254
D PFDG G LAHAY PGPGI GD HFD DE WT + G +LFLVA HE+GH+LGL
Sbjct: 551 DFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT---KDTTGTNLFLVAAHEIGHSLGL 721
Query: 255 EHSNDPTAIMAPFYQYM-ETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVX 313
HS + A+M P Y + + F+L DD+ GIQ +YG
Sbjct: 722 FHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGPPPDSPETPLVPTEPVPPEP-- 895
Query: 314 XXXXXXXXXXXXXXXXXXXXXXXGAKPNICDG--NFNTLAILRREMFVFKDQWFWRVRNN 371
P CD +F+ ++ LR E+ +FKD+ FWR ++
Sbjct: 896 ------------------------GTPANCDPALSFDAVSTLRGEILIFKDRHFWR-KSL 1000
Query: 372 RVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF-FKGNKYWVFKDTTLQPGYPHDLITL 430
R ++ I+ FW LP +DA YE + + VF FKGN++W + ++ GYP + TL
Sbjct: 1001RKLEPELHLISSFWPSLPSGVDAAYEVTSKDLVFIFKGNQFWAIRGNEVRAGYPRGIHTL 1180
Query: 431 GNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQG 489
G ID+AI ++ KTYFF D+YWR+ E+ +M+PG+PK I + GI
Sbjct: 1181GFPPTVRKIDAAISDKEKNKTYFFVEDKYWRFDEKRNSMEPGFPKQIAEDFPGIDSKIDA 1360
Query: 490 AFVHKENGFTYFYKGKEYWKFNNQILKV 517
F +E GF YF+ G +F+ KV
Sbjct: 1361VF--EEFGFFYFFTGSSQLEFDPNAKKV 1438
Score = 63.2 bits (152), Expect = 7e-08
Identities = 46/153 (30%), Positives = 72/153 (46%), Gaps = 6/153 (3%)
Frame = +2
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIP--PHGIDSAIWWEDV 448
S DAV G + FK +W L+P +L + + P P G+D+A
Sbjct: 926 SFDAV-STLRGEILIFKDRHFWRKSLRKLEP----ELHLISSFWPSLPSGVDAAYEVTSK 1090
Query: 449 GKTYFFKGDRYWRY-SEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKG 504
+ FKG+++W E++ GYP+ I G P + + A KE TYF+
Sbjct: 1091 DLVFIFKGNQFWAIRGNEVRA---GYPRGIHTL-GFPPTVRKIDAAISDKEKNKTYFFVE 1258
Query: 505 KEYWKFNNQILKVEPGYPRSILKDFMGCDGPTD 537
+YW+F+ + +EPG+P+ I +DF G D D
Sbjct: 1259 DKYWRFDEKRNSMEPGFPKQIAEDFPGIDSKID 1357
>gb|AF072685.1|AF072685 Bos taurus matrix metalloproteinase 13 (MMP13) mRNA, complete cds
Length = 1516
Score = 281 bits (718), Expect = 2e-73
Identities = 182/513 (35%), Positives = 255/513 (49%), Gaps = 15/513 (2%)
Frame = +1
Query: 20 VFFLQTLLWILCATVCGT------EQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSAL 73
+FF T W L G E + E +L+ Y Y P + +A ++ L
Sbjct: 28 LFFSWTACWSLPLPSDGDSEDLSEEDFQFAESYLKSY-YYPQNPAGILKKTAASSVIDRL 204
Query: 74 AAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIT 133
MQ F+G+ +TG++D NT+D MKKPRCGVPD ++N+ + KW ++T
Sbjct: 205 REMQSFFGLEVTGRLDDNTLDIMKKPRCGVPDV----GEYNVFPRTL-----KWSKMNLT 357
Query: 134 YSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFH 193
Y I N TP + E +A R+AF VW +VTPL F + + NG DI I F + H
Sbjct: 358 YRIVNYTPDLTHSEVEKAFRKAFKVWSDVTPLNF-----TRIHNGT--ADIMISFGTKEH 516
Query: 194 GDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALG 253
GD PFDG G LAHA+ PGP GGD HFD DE WT + G +LFLVA HE GH+LG
Sbjct: 517 GDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWTSSSK---GYNLFLVAAHEFGHSLG 687
Query: 254 LEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVX 313
L+HS DP A+M P Y Y +F LP+DD+QGIQ +YG
Sbjct: 688 LDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPYSKHPKT--------- 840
Query: 314 XXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAI--LRREMFVFKDQWFWRVRNN 371
P+ CD + + AI LR E +FKD++FWR+
Sbjct: 841 --------------------------PDKCDPSLSLDAITSLRGETLIFKDRFFWRLHPQ 942
Query: 372 RVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF-FKGNKYWVFKDTTLQPGYPHDLITL 430
+V + F LP IDA YE+ + +F F+G K+W + YP + L
Sbjct: 943 QV-EAELFLTKSFGPELPNRIDAAYEHPSHDLIFIFRGRKFWALSGYDILEDYPKKISEL 1119
Query: 431 GNGIPPH--GIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPI-TIWKGIPESP 487
G P H I +A+ +ED GKT FF ++ W Y + MD YP+ I ++ GI +
Sbjct: 1120--GFPKHVKKISAALHFEDSGKTLFFSENQVWSYDDTNHVMDKDYPRLIEEVFPGIGDKV 1293
Query: 488 QGAFVHKENGFTYFYKGK---EYWKFNNQILKV 517
V+++NG+ YF+ G EY ++N+I++V
Sbjct: 1294DA--VYQKNGYIYFFNGPIQFEYSIWSNRIVRV 1386
>gb|L76275.1|XELCOLL Xenopus laevis collagenase 4 precursor gene, complete cds
Length = 1609
Score = 281 bits (718), Expect = 2e-73
Identities = 165/443 (37%), Positives = 230/443 (51%), Gaps = 4/443 (0%)
Frame = +3
Query: 73 LAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHI 132
L MQ+F+G+ +TG +D T++ M+KPRCGV D + S+ WQ K +
Sbjct: 219 LEQMQKFFGLKVTGTLDPKTVEVMEKPRCGVYDVGQYST---------VAKSSAWQKKDL 371
Query: 133 TYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGF 192
TY I N TP + + AI+RAF VW +VTPLTF + Y+E+ DI I F +G
Sbjct: 372 TYRILNFTPDLPQADVETAIQRAFKVWSDVTPLTFTRI-YNEVS------DIEISFTAGD 530
Query: 193 HGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHAL 252
H D+SPFDG GG LAHA+ PG GIGGD HFD DE WT + + +LFLVA HE GH+L
Sbjct: 531 HKDNSPFDGSGGILAHAFQPGNGIGGDAHFDEDETWTKTSEIY---NLFLVAAHEFGHSL 701
Query: 253 GLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSV 312
GL HS D A+M P Y + F+LP DD+ IQ +YG
Sbjct: 702 GLSHSTDQGALMYPTYSNTDPKTFQLPQDDINAIQYLYG--------------------- 818
Query: 313 XXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGN--FNTLAILRREMFVFKDQWFWRVRN 370
+ P+ CD N FN + +R E+ F ++ WR ++
Sbjct: 819 --------------KSSNPVQPTGPSTPSRCDPNVVFNAVTTMRGELIFFVKRFLWR-KH 953
Query: 371 NRVMDGYPMQITYFWRGLPPSIDAVYENS-DGNFVFFKGNKYWVFKDTTLQPGYPHDLIT 429
+ + M + FW LP +IDA YEN + FKG+KY + GYP ++ +
Sbjct: 954 PQASEAELMFVQAFWPSLPTNIDAAYENPITEQILVFKGSKYTALDGFDVVQGYPRNIYS 1133
Query: 430 LGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQ 488
LG ID+A+ E +GKTYFF +YW Y E+ K MD G+PK I+ + GIP+
Sbjct: 1134LGFPKTVKRIDAAVHIEQLGKTYFFAAKKYWSYDEDKKQMDKGFPKQISNDFPGIPDKID 1313
Query: 489 GAFVHKENGFTYFYKGKEYWKFN 511
AF ++ G YF+ G+ +++N
Sbjct: 1314AAFYYR--GRLYFFIGRSQFEYN 1376
>ref|NM_002422.2| Homo sapiens matrix metalloproteinase 3 (stromelysin 1,
progelatinase) (MMP3), mRNA
Length = 1821
Score = 281 bits (718), Expect = 2e-73
Identities = 180/508 (35%), Positives = 253/508 (49%), Gaps = 16/508 (3%)
Frame = +1
Query: 26 LLWILCATVC----------GTEQYFN-VEVWLQKYGYLPPTDPRMSVLRSAETMQSALA 74
+L +LC VC G + N V+ +L+ Y L + + + + +
Sbjct: 79 ILLLLCVAVCSAYPLDGAARGEDTSMNLVQKYLENYYDLKKDVKQFVRRKDSGPVVKKIR 258
Query: 75 AMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITY 134
MQ+F G+ +TGK+D +T++ M+KPRCGVPD + I KW+ H+TY
Sbjct: 259 EMQKFLGLEVTGKLDSDTLEVMRKPRCGVPDVGHFRTFPGI---------PKWRKTHLTY 411
Query: 135 SIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHG 194
I N TP + A+ +A VW+ VTPLTF S L G + DI I FA HG
Sbjct: 412 RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTF-----SRLYEG--EADIMISFAVREHG 570
Query: 195 DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGL 254
D PFDG G LAHAY PGPGI GD HFD DE WT + G +LFLVA HE+GH+LGL
Sbjct: 571 DFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT---KDTTGTNLFLVAAHEIGHSLGL 741
Query: 255 EHSNDPTAIMAPFYQYM-ETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVX 313
HS + A+M P Y + + F+L DD+ GIQ +YG
Sbjct: 742 FHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGPPPDSPETPLVPTEPVPPEP-- 915
Query: 314 XXXXXXXXXXXXXXXXXXXXXXXGAKPNICDG--NFNTLAILRREMFVFKDQWFWRVRNN 371
P CD +F+ ++ LR E+ +FKD+ FWR ++
Sbjct: 916 ------------------------GTPANCDPALSFDAVSTLRGEILIFKDRHFWR-KSL 1020
Query: 372 RVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF-FKGNKYWVFKDTTLQPGYPHDLITL 430
R ++ I+ FW LP +DA YE + + VF FKGN++W + ++ GYP + TL
Sbjct: 1021RKLEPELHLISSFWPSLPSGVDAAYEVTSKDLVFIFKGNQFWAIRGNEVRAGYPRGIHTL 1200
Query: 431 GNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQG 489
G ID+AI ++ KTYFF D+YWR+ E+ +M+PG+PK I + GI
Sbjct: 1201GFPPTVRKIDAAISDKEKNKTYFFVEDKYWRFDEKRNSMEPGFPKQIAEDFPGIDSKIDA 1380
Query: 490 AFVHKENGFTYFYKGKEYWKFNNQILKV 517
F +E GF YF+ G +F+ KV
Sbjct: 1381VF--EEFGFFYFFTGSSQLEFDPNAKKV 1458
Score = 63.2 bits (152), Expect = 7e-08
Identities = 46/153 (30%), Positives = 72/153 (46%), Gaps = 6/153 (3%)
Frame = +1
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIP--PHGIDSAIWWEDV 448
S DAV G + FK +W L+P +L + + P P G+D+A
Sbjct: 946 SFDAV-STLRGEILIFKDRHFWRKSLRKLEP----ELHLISSFWPSLPSGVDAAYEVTSK 1110
Query: 449 GKTYFFKGDRYWRY-SEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKG 504
+ FKG+++W E++ GYP+ I G P + + A KE TYF+
Sbjct: 1111 DLVFIFKGNQFWAIRGNEVRA---GYPRGIHTL-GFPPTVRKIDAAISDKEKNKTYFFVE 1278
Query: 505 KEYWKFNNQILKVEPGYPRSILKDFMGCDGPTD 537
+YW+F+ + +EPG+P+ I +DF G D D
Sbjct: 1279 DKYWRFDEKRNSMEPGFPKQIAEDFPGIDSKID 1377
>emb|X05231.1|HSCOLLR Human mRNA for collagenase (E.C. 3.4.24)
Length = 1968
Score = 280 bits (717), Expect = 2e-73
Identities = 175/483 (36%), Positives = 245/483 (50%), Gaps = 8/483 (1%)
Frame = +1
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+KY L ++ R++ + L MQ+F+G+ +TGK D T+ MK+PRCG
Sbjct: 166 VQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCG 345
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQ 160
VPD + + LT +W+ H+TY I+N TP + + AI +AF +W
Sbjct: 346 VPDVAQ-----------FVLTEGNPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWS 492
Query: 161 NVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
NVTPLTF +V + DI I F G H D+SPFDG GG LAHA+ PGPGIGGD
Sbjct: 493 NVTPLTFTKVSEGQ-------ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDA 651
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD E WT N +L VA HELGH+LGL HS D A+M P Y + + + +L
Sbjct: 652 HFDEHERWT---NNFTEYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--SGDVQLAQ 816
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ IYG P
Sbjct: 817 DDIDGIQAIYGRSQNPVQPIGPQT-----------------------------------P 891
Query: 341 NICDG--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQIT-YFWRGLPPSIDAVYE 397
CD F+ + +R E+ FKD+++ +R N + T FW LP ++A YE
Sbjct: 892 KACDSKLTFDAITTIRGEVMFFKDRFY--MRTNPFYPEVELNFTSVFWPQLPNGLEAAYE 1065
Query: 398 NSDGNFV-FFKGNKYWVFKDTTLQPGYPHDLI-TLGNGIPPHGIDSAIWWEDVGKTYFFK 455
+D + V FFKGNKYW + + GYP D+ + G ID+A+ E+ GKTYFF
Sbjct: 1066FADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFV 1245
Query: 456 GDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
++YWRY E ++MDPGYPK I + GI F+ ++GF YF+ G +KF+ +
Sbjct: 1246ANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFM--KDGFFYFFHGTRQYKFDPKT 1419
Query: 515 LKV 517
++
Sbjct: 1420KRI 1428
Score = 64.7 bits (156), Expect = 3e-08
Identities = 33/105 (31%), Positives = 56/105 (52%), Gaps = 3/105 (2%)
Frame = +1
Query: 436 PHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFV 492
P+G+++A + D + FFKG++YW + + + + GYPK I G P + + A
Sbjct: 1039 PNGLEAAYEFADRDEVRFFKGNKYW--AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALS 1212
Query: 493 HKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTD 537
+ G TYF+ +YW+++ ++PGYP+ I DF G D
Sbjct: 1213 EENTGKTYFFVANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVD 1347
>ref|NM_005940.2| Homo sapiens matrix metalloproteinase 11 (stromelysin 3) (MMP11),
mRNA
Length = 2260
Score = 279 bits (714), Expect = 5e-73
Identities = 156/443 (35%), Positives = 225/443 (50%), Gaps = 1/443 (0%)
Frame = +2
Query: 96 MKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRA 155
++ PRCGVPD + G S N R+KR+ L+G +W+ +TY I ++ + R+ + A
Sbjct: 245 LRPPRCGVPDPSDGLSARN-RQKRFVLSGGRWEKTDLTYRILRFPWQLVQEQVRQTMAEA 421
Query: 156 FDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG 215
VW +VTPLTF EV G+ DI I FA +HGD PFDG GG LAHA+FP
Sbjct: 422 LKVWSDVTPLTFTEV-----HEGR--ADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTH 580
Query: 216 IGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN 275
GD HFD DE WT+G + G DL VA HE GH LGL+H+ A+M+ FY +
Sbjct: 581 REGDVHFDYDETWTIG--DDQGTDLLQVAAHEFGHVLGLQHTTAAKALMSAFYTFRYP-- 748
Query: 276 FKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXX 335
L DD +G+Q +YG
Sbjct: 749 LSLSPDDCRGVQHLYGQPW----------------PTVTSRTPALGPQAGIDTNEIAPLE 880
Query: 336 XGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 395
A P+ C+ +F+ ++ +R E+F FK + WR+R ++ GYP + W+GLP +DA
Sbjct: 881 PDAPPDACEASFDAVSTIRGELFFFKAGFVWRLRGGQLQPGYPALASRHWQGLPSPVDAA 1060
Query: 396 YENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLG-NGIPPHGIDSAIWWEDVGKTYFF 454
+E++ G+ FF+G +YWV+ G P L LG P H + +W + K YFF
Sbjct: 1061FEDAQGHIWFFQGAQYWVYDGEKPVLG-PAPLTELGLVRFPVHA--ALVWGPEKNKIYFF 1231
Query: 455 KGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
+G YWR+ + +D P+ T W+G+P AF +G+ YF +G+ YWKF+
Sbjct: 1232RGRDYWRFHPSTRRVDSPVPRRATDWRGVPSEIDAAF-QDADGYAYFLRGRLYWKFDPVK 1408
Query: 515 LKVEPGYPRSILKDFMGCDGPTD 537
+K G+PR + DF GC P +
Sbjct: 1409VKALEGFPRLVGPDFFGCAEPAN 1477
>ref|XM_009873.3| Homo sapiens matrix metalloproteinase 11 (stromelysin 3) (MMP11),
mRNA
Length = 2247
Score = 279 bits (714), Expect = 5e-73
Identities = 156/443 (35%), Positives = 225/443 (50%), Gaps = 1/443 (0%)
Frame = +1
Query: 96 MKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRA 155
++ PRCGVPD + G S N R+KR+ L+G +W+ +TY I ++ + R+ + A
Sbjct: 232 LRPPRCGVPDPSDGLSARN-RQKRFVLSGGRWEKTDLTYRILRFPWQLVQEQVRQTMAEA 408
Query: 156 FDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG 215
VW +VTPLTF EV G+ DI I FA +HGD PFDG GG LAHA+FP
Sbjct: 409 LKVWSDVTPLTFTEV-----HEGR--ADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTH 567
Query: 216 IGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN 275
GD HFD DE WT+G + G DL VA HE GH LGL+H+ A+M+ FY +
Sbjct: 568 REGDVHFDYDETWTIG--DDQGTDLLQVAAHEFGHVLGLQHTTAAKALMSAFYTFRYP-- 735
Query: 276 FKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXX 335
L DD +G+Q +YG
Sbjct: 736 LSLSPDDCRGVQHLYGQPW----------------PTVTSRTPALGPQAGIDTNEIAPLE 867
Query: 336 XGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 395
A P+ C+ +F+ ++ +R E+F FK + WR+R ++ GYP + W+GLP +DA
Sbjct: 868 PDAPPDACEASFDAVSTIRGELFFFKAGFVWRLRGGQLQPGYPALASRHWQGLPSPVDAA 1047
Query: 396 YENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLG-NGIPPHGIDSAIWWEDVGKTYFF 454
+E++ G+ FF+G +YWV+ G P L LG P H + +W + K YFF
Sbjct: 1048FEDAQGHIWFFQGAQYWVYDGEKPVLG-PAPLTELGLVRFPVHA--ALVWGPEKNKIYFF 1218
Query: 455 KGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
+G YWR+ + +D P+ T W+G+P AF +G+ YF +G+ YWKF+
Sbjct: 1219RGRDYWRFHPSTRRVDSPVPRRATDWRGVPSEIDAAF-QDADGYAYFLRGRLYWKFDPVK 1395
Query: 515 LKVEPGYPRSILKDFMGCDGPTD 537
+K G+PR + DF GC P +
Sbjct: 1396VKALEGFPRLVGPDFFGCAEPAN 1464
>emb|X57766.1|HSSTROL3 Human stromelysin-3 mRNA
Length = 2247
Score = 279 bits (714), Expect = 5e-73
Identities = 156/443 (35%), Positives = 225/443 (50%), Gaps = 1/443 (0%)
Frame = +1
Query: 96 MKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRA 155
++ PRCGVPD + G S N R+KR+ L+G +W+ +TY I ++ + R+ + A
Sbjct: 232 LRPPRCGVPDPSDGLSARN-RQKRFVLSGGRWEKTDLTYRILRFPWQLVQEQVRQTMAEA 408
Query: 156 FDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG 215
VW +VTPLTF EV G+ DI I FA +HGD PFDG GG LAHA+FP
Sbjct: 409 LKVWSDVTPLTFTEV-----HEGR--ADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTH 567
Query: 216 IGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDN 275
GD HFD DE WT+G + G DL VA HE GH LGL+H+ A+M+ FY +
Sbjct: 568 REGDVHFDYDETWTIG--DDQGTDLLQVAAHEFGHVLGLQHTTAAKALMSAFYTFRYP-- 735
Query: 276 FKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXX 335
L DD +G+Q +YG
Sbjct: 736 LSLSPDDCRGVQHLYGQPW----------------PTVTSRTPALGPQAGIDTNEIAPLE 867
Query: 336 XGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 395
A P+ C+ +F+ ++ +R E+F FK + WR+R ++ GYP + W+GLP +DA
Sbjct: 868 PDAPPDACEASFDAVSTIRGELFFFKAGFVWRLRGGQLQPGYPALASRHWQGLPSPVDAA 1047
Query: 396 YENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLG-NGIPPHGIDSAIWWEDVGKTYFF 454
+E++ G+ FF+G +YWV+ G P L LG P H + +W + K YFF
Sbjct: 1048FEDAQGHIWFFQGAQYWVYDGEKPVLG-PAPLTELGLVRFPVHA--ALVWGPEKNKIYFF 1218
Query: 455 KGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
+G YWR+ + +D P+ T W+G+P AF +G+ YF +G+ YWKF+
Sbjct: 1219RGRDYWRFHPSTRRVDSPVPRRATDWRGVPSEIDAAF-QDADGYAYFLRGRLYWKFDPVK 1395
Query: 515 LKVEPGYPRSILKDFMGCDGPTD 537
+K G+PR + DF GC P +
Sbjct: 1396VKALEGFPRLVGPDFFGCAEPAN 1464
>gb|AE003464.1|AE003464 Drosophila melanogaster genomic scaffold 142000013386038 section 13 of
15, complete sequence
Length = 306848
Score = 212 bits (540), Expect(2) = 6e-73
Identities = 119/332 (35%), Positives = 173/332 (51%), Gaps = 1/332 (0%)
Frame = -2
Query: 182 VDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLF 241
+ +T F HGD FDG+GG LAHA+FP GGD HFD E WT+G+P G +LF
Sbjct: 298822 LSLTPRFVESEHGDGDAFDGQGGTLAHAFFPV--FGGDAHFDDAELWTIGSPR--GTNLF 298655
Query: 242 LVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXX 301
VA HE GH+LGL HS+ +A+MAPFY+ E FKL DD IQ +YG
Sbjct: 298654 QVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPV-FKLDEDDKAAIQSLYGRKT------- 298499
Query: 302 XXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFK 361
+ K + D FN+ + E + FK
Sbjct: 298498 --------NQLRPTNVYPATTQRPYSPPKVPLDDSICKDSKVDTLFNSA---QGETYAFK 298352
Query: 362 DQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQP 421
++++ + V +GYP I+ W GLP +IDA + +G FFKG +YW ++ +
Sbjct: 298351 GDKYYKLTTDSVEEGYPQLISKGWPGLPGNIDAAFTYKNGKTYFFKGTQYWRYQGRQMDG 298172
Query: 422 GYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMK-TMDPGYPKPITIW 480
YP ++ GIP H +D+A+ W GK YFFKG ++WR+ + + YPKPI+ W
Sbjct: 298171 VYPKEISEGFTGIPDH-LDAAMVWGGNGKIYFFKGSKFWRFDPAKRPPVKASYPKPISNW 297995
Query: 481 KGIPESPQGAFVHKENGFTYFYKGKEYWKFNN 512
+G+P + A + NG+TYF+KG +Y++F++
Sbjct: 297994 EGVPNNLDAALKY-TNGYTYFFKGDKYYRFHD 297902
Score = 89.4 bits (220), Expect = 1e-15
Identities = 52/136 (38%), Positives = 81/136 (59%), Gaps = 2/136 (1%)
Frame = -2
Query: 392 IDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKT 451
+D ++ ++ G FKG+KY+ +++ GYP LI+ G P ID+A +++ GKT
Sbjct: 298399 VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYP-QLISKGWPGLPGNIDAAFTYKN-GKT 298226
Query: 452 YFFKGDRYWRYSEEMKTMDPGYPKPITI-WKGIPESPQGAFVHKENGFTYFYKGKEYWKF 510
YFFKG +YWRY + + MD YPK I+ + GIP+ A V NG YF+KG ++W+F
Sbjct: 298225 YFFKGTQYWRY--QGRQMDGVYPKEISEGFTGIPDHLDAAMVWGGNGKIYFFKGSKFWRF 298052
Query: 511 N-NQILKVEPGYPRSI 525
+ + V+ YP+ I
Sbjct: 298051 DPAKRPPVKASYPKPI 298004
Score = 89.0 bits (219), Expect(2) = 6e-73
Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Frame = -1
Query: 44 EVWLQKYGYLPPT--DPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
+++L ++GYLP + +P S L T SA+ Q F G+N+TG++D T+ M PRC
Sbjct: 299282 QIYLSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRC 299103
Query: 102 GVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQN 161
GV D+ R KRYAL G +W+ K++TY I ++ + I RAF VW
Sbjct: 299102 GVRDRVGTGDS---RSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAEIGRAFAVWSE 298932
Query: 162 VTPLTF 167
T LTF
Sbjct: 298931 DTDLTF 298914
>gb|AC099037.1| Drosophila melanogaster, chromosome 2R, region 60E-60F, BAC clone
BACR27P17, complete sequence
Length = 193322
Score = 212 bits (540), Expect(2) = 6e-73
Identities = 119/332 (35%), Positives = 173/332 (51%), Gaps = 1/332 (0%)
Frame = +2
Query: 182 VDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLF 241
+ +T F HGD FDG+GG LAHA+FP GGD HFD E WT+G+P G +LF
Sbjct: 181427 LSLTPRFVESEHGDGDAFDGQGGTLAHAFFPV--FGGDAHFDDAELWTIGSPR--GTNLF 181594
Query: 242 LVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXX 301
VA HE GH+LGL HS+ +A+MAPFY+ E FKL DD IQ +YG
Sbjct: 181595 QVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPV-FKLDEDDKAAIQSLYGRKT------- 181750
Query: 302 XXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFK 361
+ K + D FN+ + E + FK
Sbjct: 181751 --------NQLRPTNVYPATTQRPYSPPKVPLDDSICKDSKVDTLFNSA---QGETYAFK 181897
Query: 362 DQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQP 421
++++ + V +GYP I+ W GLP +IDA + +G FFKG +YW ++ +
Sbjct: 181898 GDKYYKLTTDSVEEGYPQLISKGWPGLPGNIDAAFTYKNGKTYFFKGTQYWRYQGRQMDG 182077
Query: 422 GYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMK-TMDPGYPKPITIW 480
YP ++ GIP H +D+A+ W GK YFFKG ++WR+ + + YPKPI+ W
Sbjct: 182078 VYPKEISEGFTGIPDH-LDAAMVWGGNGKIYFFKGSKFWRFDPAKRPPVKASYPKPISNW 182254
Query: 481 KGIPESPQGAFVHKENGFTYFYKGKEYWKFNN 512
+G+P + A + NG+TYF+KG +Y++F++
Sbjct: 182255 EGVPNNLDAALKY-TNGYTYFFKGDKYYRFHD 182347
Score = 89.4 bits (220), Expect = 1e-15
Identities = 52/136 (38%), Positives = 81/136 (59%), Gaps = 2/136 (1%)
Frame = +2
Query: 392 IDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKT 451
+D ++ ++ G FKG+KY+ +++ GYP LI+ G P ID+A +++ GKT
Sbjct: 181850 VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYP-QLISKGWPGLPGNIDAAFTYKN-GKT 182023
Query: 452 YFFKGDRYWRYSEEMKTMDPGYPKPITI-WKGIPESPQGAFVHKENGFTYFYKGKEYWKF 510
YFFKG +YWRY + + MD YPK I+ + GIP+ A V NG YF+KG ++W+F
Sbjct: 182024 YFFKGTQYWRY--QGRQMDGVYPKEISEGFTGIPDHLDAAMVWGGNGKIYFFKGSKFWRF 182197
Query: 511 N-NQILKVEPGYPRSI 525
+ + V+ YP+ I
Sbjct: 182198 DPAKRPPVKASYPKPI 182245
Score = 89.0 bits (219), Expect(2) = 6e-73
Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Frame = +1
Query: 44 EVWLQKYGYLPPT--DPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
+++L ++GYLP + +P S L T SA+ Q F G+N+TG++D T+ M PRC
Sbjct: 180967 QIYLSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRC 181146
Query: 102 GVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQN 161
GV D+ R KRYAL G +W+ K++TY I ++ + I RAF VW
Sbjct: 181147 GVRDRVGTGDS---RSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAEIGRAFAVWSE 181317
Query: 162 VTPLTF 167
T LTF
Sbjct: 181318 DTDLTF 181335
>gb|AC007925.5|AC007925 Drosophila melanogaster, chromosome 2R, region 60E-60E, BAC clone
BACR03B07, complete sequence
Length = 170089
Score = 212 bits (540), Expect(2) = 6e-73
Identities = 119/332 (35%), Positives = 173/332 (51%), Gaps = 1/332 (0%)
Frame = -3
Query: 182 VDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLF 241
+ +T F HGD FDG+GG LAHA+FP GGD HFD E WT+G+P G +LF
Sbjct: 26585 LSLTPRFVESEHGDGDAFDGQGGTLAHAFFPV--FGGDAHFDDAELWTIGSPR--GTNLF 26418
Query: 242 LVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXX 301
VA HE GH+LGL HS+ +A+MAPFY+ E FKL DD IQ +YG
Sbjct: 26417 QVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPV-FKLDEDDKAAIQSLYGRKT------- 26262
Query: 302 XXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFK 361
+ K + D FN+ + E + FK
Sbjct: 26261 --------NQLRPTNVYPATTQRPYSPPKVPLDDSICKDSKVDTLFNSA---QGETYAFK 26115
Query: 362 DQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQP 421
++++ + V +GYP I+ W GLP +IDA + +G FFKG +YW ++ +
Sbjct: 26114 GDKYYKLTTDSVEEGYPQLISKGWPGLPGNIDAAFTYKNGKTYFFKGTQYWRYQGRQMDG 25935
Query: 422 GYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMK-TMDPGYPKPITIW 480
YP ++ GIP H +D+A+ W GK YFFKG ++WR+ + + YPKPI+ W
Sbjct: 25934 VYPKEISEGFTGIPDH-LDAAMVWGGNGKIYFFKGSKFWRFDPAKRPPVKASYPKPISNW 25758
Query: 481 KGIPESPQGAFVHKENGFTYFYKGKEYWKFNN 512
+G+P + A + NG+TYF+KG +Y++F++
Sbjct: 25757 EGVPNNLDAALKY-TNGYTYFFKGDKYYRFHD 25665
Score = 89.4 bits (220), Expect = 1e-15
Identities = 52/136 (38%), Positives = 81/136 (59%), Gaps = 2/136 (1%)
Frame = -3
Query: 392 IDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKT 451
+D ++ ++ G FKG+KY+ +++ GYP LI+ G P ID+A +++ GKT
Sbjct: 26162 VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYP-QLISKGWPGLPGNIDAAFTYKN-GKT 25989
Query: 452 YFFKGDRYWRYSEEMKTMDPGYPKPITI-WKGIPESPQGAFVHKENGFTYFYKGKEYWKF 510
YFFKG +YWRY + + MD YPK I+ + GIP+ A V NG YF+KG ++W+F
Sbjct: 25988 YFFKGTQYWRY--QGRQMDGVYPKEISEGFTGIPDHLDAAMVWGGNGKIYFFKGSKFWRF 25815
Query: 511 N-NQILKVEPGYPRSI 525
+ + V+ YP+ I
Sbjct: 25814 DPAKRPPVKASYPKPI 25767
Score = 89.0 bits (219), Expect(2) = 6e-73
Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Frame = -2
Query: 44 EVWLQKYGYLPPT--DPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
+++L ++GYLP + +P S L T SA+ Q F G+N+TG++D T+ M PRC
Sbjct: 27045 QIYLSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRC 26866
Query: 102 GVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQN 161
GV D+ R KRYAL G +W+ K++TY I ++ + I RAF VW
Sbjct: 26865 GVRDRVGTGDS---RSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAEIGRAFAVWSE 26695
Query: 162 VTPLTF 167
T LTF
Sbjct: 26694 DTDLTF 26677
>gb|AC007581.5|AC007581 Drosophila melanogaster, chromosome 2R, region 60E-60E, BAC clone
BACR03I24, complete sequence
Length = 156508
Score = 212 bits (540), Expect(2) = 6e-73
Identities = 119/332 (35%), Positives = 173/332 (51%), Gaps = 1/332 (0%)
Frame = -3
Query: 182 VDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLF 241
+ +T F HGD FDG+GG LAHA+FP GGD HFD E WT+G+P G +LF
Sbjct: 104534 LSLTPRFVESEHGDGDAFDGQGGTLAHAFFPV--FGGDAHFDDAELWTIGSPR--GTNLF 104367
Query: 242 LVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXX 301
VA HE GH+LGL HS+ +A+MAPFY+ E FKL DD IQ +YG
Sbjct: 104366 QVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPV-FKLDEDDKAAIQSLYGRKT------- 104211
Query: 302 XXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFK 361
+ K + D FN+ + E + FK
Sbjct: 104210 --------NQLRPTNVYPATTQRPYSPPKVPLDDSICKDSKVDTLFNSA---QGETYAFK 104064
Query: 362 DQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQP 421
++++ + V +GYP I+ W GLP +IDA + +G FFKG +YW ++ +
Sbjct: 104063 GDKYYKLTTDSVEEGYPQLISKGWPGLPGNIDAAFTYKNGKTYFFKGTQYWRYQGRQMDG 103884
Query: 422 GYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMK-TMDPGYPKPITIW 480
YP ++ GIP H +D+A+ W GK YFFKG ++WR+ + + YPKPI+ W
Sbjct: 103883 VYPKEISEGFTGIPDH-LDAAMVWGGNGKIYFFKGSKFWRFDPAKRPPVKASYPKPISNW 103707
Query: 481 KGIPESPQGAFVHKENGFTYFYKGKEYWKFNN 512
+G+P + A + NG+TYF+KG +Y++F++
Sbjct: 103706 EGVPNNLDAALKY-TNGYTYFFKGDKYYRFHD 103614
Score = 89.4 bits (220), Expect = 1e-15
Identities = 52/136 (38%), Positives = 81/136 (59%), Gaps = 2/136 (1%)
Frame = -3
Query: 392 IDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKT 451
+D ++ ++ G FKG+KY+ +++ GYP LI+ G P ID+A +++ GKT
Sbjct: 104111 VDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYP-QLISKGWPGLPGNIDAAFTYKN-GKT 103938
Query: 452 YFFKGDRYWRYSEEMKTMDPGYPKPITI-WKGIPESPQGAFVHKENGFTYFYKGKEYWKF 510
YFFKG +YWRY + + MD YPK I+ + GIP+ A V NG YF+KG ++W+F
Sbjct: 103937 YFFKGTQYWRY--QGRQMDGVYPKEISEGFTGIPDHLDAAMVWGGNGKIYFFKGSKFWRF 103764
Query: 511 N-NQILKVEPGYPRSI 525
+ + V+ YP+ I
Sbjct: 103763 DPAKRPPVKASYPKPI 103716
Score = 89.0 bits (219), Expect(2) = 6e-73
Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Frame = -2
Query: 44 EVWLQKYGYLPPT--DPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
+++L ++GYLP + +P S L T SA+ Q F G+N+TG++D T+ M PRC
Sbjct: 104994 QIYLSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRC 104815
Query: 102 GVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQN 161
GV D+ R KRYAL G +W+ K++TY I ++ + I RAF VW
Sbjct: 104814 GVRDRVGTGDS---RSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAEIGRAFAVWSE 104644
Query: 162 VTPLTF 167
T LTF
Sbjct: 104643 DTDLTF 104626
>ref|NM_010809.1| Mus musculus matrix metalloproteinase 3 (Mmp3), mRNA
Length = 1858
Score = 278 bits (711), Expect = 1e-72
Identities = 180/509 (35%), Positives = 244/509 (47%), Gaps = 14/509 (2%)
Frame = +2
Query: 23 LQTLLWILCATVCGTEQYFN-----------VEVWLQKYGYLPPTDPRMSVLRSAETMQS 71
L LLW LC VC + + ++ +L+ Y L + + + +
Sbjct: 92 LPVLLW-LCVVVCSSYPLHDSARDDDAGMELLQKYLENYYGLAKDVKQFIKKKDSSLIVK 268
Query: 72 ALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKH 131
+ MQ+F G+ MTGK+D NT++ M KPRCGVPD G S F KW+ H
Sbjct: 269 KIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPD-VGGFSTFP--------GSPKWRKSH 421
Query: 132 ITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASG 191
ITY I N TP + AI +A VW+ VTPLTF + E DI I FA G
Sbjct: 422 ITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSRISEGE-------ADIMISFAVG 580
Query: 192 FHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHA 251
HGD PFDG G LAHAY PGPGI GD HFD DE WT + G +LFLVA HELGH+
Sbjct: 581 EHGDFVPFDGPGTVLAHAYAPGPGINGDAHFDDDERWT---EDVTGTNLFLVAAHELGHS 751
Query: 252 LGLEHSNDPTAIMAPFYQ-YMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHR 310
LGL HS A+M P Y+ + F L DD+ GIQ +YG
Sbjct: 752 LGLYHSAKAEALMYPVYKSSTDLSRFHLSQDDVDGIQSLYGTPTASPDVLVVPTKSNSLE 931
Query: 311 SVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRN 370
F+ ++ LR E+ FKD+ FWR ++
Sbjct: 932 PETSPMCSSTLF------------------------FDAVSTLRGEVLFFKDRHFWR-KS 1036
Query: 371 NRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF-FKGNKYWVFKDTTLQPGYPHDLIT 429
R + I+ FW LP ++DA YE ++ + VF FKGN++W + GYP + T
Sbjct: 1037LRTPEPEFYLISSFWPSLPSNMDAAYEVTNRDTVFIFKGNQFWAIRGHEELAGYPKSIHT 1216
Query: 430 LGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQ 488
LG ID+AI ++ KTYFF D+YWR+ E+ ++M+PG+P+ I + G+
Sbjct: 1217LGLPATVKKIDAAISNKEKRKTYFFVEDKYWRFDEKKQSMEPGFPRKIAEDFPGVDSRVD 1396
Query: 489 GAFVHKENGFTYFYKGKEYWKFNNQILKV 517
F + GF YF+ G +F+ KV
Sbjct: 1397AVF--EAFGFLYFFSGSSQLEFDPNAKKV 1477
Score = 66.6 bits (161), Expect = 7e-09
Identities = 46/142 (32%), Positives = 71/142 (49%), Gaps = 5/142 (3%)
Frame = +2
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
G +FFK +W T +P + LI+ P +D+A + + FKG+++W
Sbjct: 992 GEVLFFKDRHFWRKSLRTPEPEFY--LISSFWPSLPSNMDAAYEVTNRDTVFIFKGNQFW 1165
Query: 461 --RYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEYWKFNNQIL 515
R EE+ GYPK I G+P + + A +KE TYF+ +YW+F+ +
Sbjct: 1166 AIRGHEELA----GYPKSIHTL-GLPATVKKIDAAISNKEKRKTYFFVEDKYWRFDEKKQ 1330
Query: 516 KVEPGYPRSILKDFMGCDGPTD 537
+EPG+PR I +DF G D D
Sbjct: 1331 SMEPGFPRKIAEDFPGVDSRVD 1396
>emb|X63162.1|MMTRANS1 M.musculus mRNA for transin-1
Length = 1858
Score = 278 bits (711), Expect = 1e-72
Identities = 180/509 (35%), Positives = 244/509 (47%), Gaps = 14/509 (2%)
Frame = +2
Query: 23 LQTLLWILCATVCGTEQYFN-----------VEVWLQKYGYLPPTDPRMSVLRSAETMQS 71
L LLW LC VC + + ++ +L+ Y L + + + +
Sbjct: 92 LPVLLW-LCVVVCSSYPLHDSARDDDAGMELLQKYLENYYGLAKDVKQFIKKKDSSLIVK 268
Query: 72 ALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKH 131
+ MQ+F G+ MTGK+D NT++ M KPRCGVPD G S F KW+ H
Sbjct: 269 KIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPD-VGGFSTFP--------GSPKWRKSH 421
Query: 132 ITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASG 191
ITY I N TP + AI +A VW+ VTPLTF + E DI I FA G
Sbjct: 422 ITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSRISEGE-------ADIMISFAVG 580
Query: 192 FHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHA 251
HGD PFDG G LAHAY PGPGI GD HFD DE WT + G +LFLVA HELGH+
Sbjct: 581 EHGDFVPFDGPGTVLAHAYAPGPGINGDAHFDDDERWT---EDVTGTNLFLVAAHELGHS 751
Query: 252 LGLEHSNDPTAIMAPFYQ-YMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHR 310
LGL HS A+M P Y+ + F L DD+ GIQ +YG
Sbjct: 752 LGLYHSAKAEALMYPVYKSSTDLSRFHLSQDDVDGIQSLYGTPTASPDVLVVPTKSNSLE 931
Query: 311 SVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRN 370
F+ ++ LR E+ FKD+ FWR ++
Sbjct: 932 PETSPMCSSTLF------------------------FDAVSTLRGEVLFFKDRHFWR-KS 1036
Query: 371 NRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF-FKGNKYWVFKDTTLQPGYPHDLIT 429
R + I+ FW LP ++DA YE ++ + VF FKGN++W + GYP + T
Sbjct: 1037LRTPEPEFYLISSFWPSLPSNMDAAYEVTNRDTVFIFKGNQFWAIRGHEELAGYPKSIHT 1216
Query: 430 LGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQ 488
LG ID+AI ++ KTYFF D+YWR+ E+ ++M+PG+P+ I + G+
Sbjct: 1217LGLPATVKKIDAAISNKEKRKTYFFVEDKYWRFDEKKQSMEPGFPRKIAEDFPGVDSRVD 1396
Query: 489 GAFVHKENGFTYFYKGKEYWKFNNQILKV 517
F + GF YF+ G +F+ KV
Sbjct: 1397AVF--EAFGFLYFFSGSSQLEFDPNAKKV 1477
Score = 66.6 bits (161), Expect = 7e-09
Identities = 46/142 (32%), Positives = 71/142 (49%), Gaps = 5/142 (3%)
Frame = +2
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
G +FFK +W T +P + LI+ P +D+A + + FKG+++W
Sbjct: 992 GEVLFFKDRHFWRKSLRTPEPEFY--LISSFWPSLPSNMDAAYEVTNRDTVFIFKGNQFW 1165
Query: 461 --RYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEYWKFNNQIL 515
R EE+ GYPK I G+P + + A +KE TYF+ +YW+F+ +
Sbjct: 1166 AIRGHEELA----GYPKSIHTL-GLPATVKKIDAAISNKEKRKTYFFVEDKYWRFDEKKQ 1330
Query: 516 KVEPGYPRSILKDFMGCDGPTD 537
+EPG+PR I +DF G D D
Sbjct: 1331 SMEPGFPRKIAEDFPGVDSRVD 1396
>gb|BC006725.1|BC006725 Mus musculus, matrix metalloproteinase 3, clone MGC:11554
IMAGE:3962288, mRNA, complete cds
Length = 1783
Score = 278 bits (711), Expect = 1e-72
Identities = 180/509 (35%), Positives = 244/509 (47%), Gaps = 14/509 (2%)
Frame = +2
Query: 23 LQTLLWILCATVCGTEQYFN-----------VEVWLQKYGYLPPTDPRMSVLRSAETMQS 71
L LLW LC VC + + ++ +L+ Y L + + + +
Sbjct: 56 LPVLLW-LCVVVCSSYPLHDSARDDDAGMELLQKYLENYYGLAKDVKQFIKKKDSSLIVK 232
Query: 72 ALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKH 131
+ MQ+F G+ MTGK+D NT++ M KPRCGVPD G S F KW+ H
Sbjct: 233 KIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPD-VGGFSTFP--------GSPKWRKSH 385
Query: 132 ITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASG 191
ITY I N TP + AI +A VW+ VTPLTF + E DI I FA G
Sbjct: 386 ITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSRISEGE-------ADIMISFAVG 544
Query: 192 FHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHA 251
HGD PFDG G LAHAY PGPGI GD HFD DE WT + G +LFLVA HELGH+
Sbjct: 545 EHGDFVPFDGPGTVLAHAYAPGPGINGDAHFDDDERWT---EDVTGTNLFLVAAHELGHS 715
Query: 252 LGLEHSNDPTAIMAPFYQ-YMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHR 310
LGL HS A+M P Y+ + F L DD+ GIQ +YG
Sbjct: 716 LGLYHSAKAEALMYPVYKSSTDLSRFHLSQDDVDGIQSLYGTPTASPDVLVVPTKSNSLE 895
Query: 311 SVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRN 370
F+ ++ LR E+ FKD+ FWR ++
Sbjct: 896 PETSPMCSSTLF------------------------FDAVSTLRGEVLFFKDRHFWR-KS 1000
Query: 371 NRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF-FKGNKYWVFKDTTLQPGYPHDLIT 429
R + I+ FW LP ++DA YE ++ + VF FKGN++W + GYP + T
Sbjct: 1001LRTPEPEFYLISSFWPSLPSNMDAAYEVTNRDTVFIFKGNQFWAIRGHEELAGYPKSIHT 1180
Query: 430 LGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQ 488
LG ID+AI ++ KTYFF D+YWR+ E+ ++M+PG+P+ I + G+
Sbjct: 1181LGLPATVKKIDAAISNKEKRKTYFFVEDKYWRFDEKKQSMEPGFPRKIAEDFPGVDSRVD 1360
Query: 489 GAFVHKENGFTYFYKGKEYWKFNNQILKV 517
F + GF YF+ G +F+ KV
Sbjct: 1361AVF--EAFGFLYFFSGSSQLEFDPNAKKV 1441
Score = 66.6 bits (161), Expect = 7e-09
Identities = 46/142 (32%), Positives = 71/142 (49%), Gaps = 5/142 (3%)
Frame = +2
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
G +FFK +W T +P + LI+ P +D+A + + FKG+++W
Sbjct: 956 GEVLFFKDRHFWRKSLRTPEPEFY--LISSFWPSLPSNMDAAYEVTNRDTVFIFKGNQFW 1129
Query: 461 --RYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEYWKFNNQIL 515
R EE+ GYPK I G+P + + A +KE TYF+ +YW+F+ +
Sbjct: 1130 AIRGHEELA----GYPKSIHTL-GLPATVKKIDAAISNKEKRKTYFFVEDKYWRFDEKKQ 1294
Query: 516 KVEPGYPRSILKDFMGCDGPTD 537
+EPG+PR I +DF G D D
Sbjct: 1295 SMEPGFPRKIAEDFPGVDSRVD 1360
>gb|M13509.1|HUMCN2 Human skin collagenase mRNA, complete cds
Length = 1970
Score = 278 bits (711), Expect = 1e-72
Identities = 174/483 (36%), Positives = 245/483 (50%), Gaps = 8/483 (1%)
Frame = +3
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+KY L ++ R++ + L MQ+F+G+ +TGK D T+ MK+PRCG
Sbjct: 168 VQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCG 347
Query: 103 VPDQTRGSSKFNIRRKRYALT--GQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQ 160
VPD + + LT +W+ H+ Y I+N TP + + AI +AF +W
Sbjct: 348 VPDVAQ-----------FVLTEGNPRWEQTHLRYRIENYTPDLPRADVDHAIEKAFQLWS 494
Query: 161 NVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
NVTPLTF +V + DI I F G H D+SPFDG GG LAHA+ PGPGIGGD
Sbjct: 495 NVTPLTFTKVSEGQ-------ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDA 653
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT N +L VA HELGH+LGL HS D A+M P Y + + + +L
Sbjct: 654 HFDEDERWT---NNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTF--SGDVQLAQ 818
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ IYG P
Sbjct: 819 DDIDGIQAIYGRSQNPVQPIGPQT-----------------------------------P 893
Query: 341 NICDG--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAVYE 397
CD F+ + +R E+ FKD+++ +R N + I+ FW LP ++A YE
Sbjct: 894 KACDSKLTFDAITTIRGEVMFFKDRFY--MRTNPFYPEVELNFISVFWPQLPNGLEAAYE 1067
Query: 398 NSDGNFV-FFKGNKYWVFKDTTLQPGYPHDLI-TLGNGIPPHGIDSAIWWEDVGKTYFFK 455
+D + V FFKGNKYW + + GYP D+ + G ID+A+ E+ GKTYFF
Sbjct: 1068FADRDEVRFFKGNKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFV 1247
Query: 456 GDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
++YWRY E ++MDP YPK I + GI F+ ++GF YF+ G +KF+ +
Sbjct: 1248ANKYWRYDEYKRSMDPSYPKMIAHDFPGIGHKVDAVFM--KDGFFYFFHGTRQYKFDPKT 1421
Query: 515 LKV 517
++
Sbjct: 1422KRI 1430
Score = 63.9 bits (154), Expect = 4e-08
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Frame = +3
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
G +FFK Y + P + I++ P+G+++A + D + FFKG++YW
Sbjct: 942 GEVMFFKDRFY--MRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNKYW 1115
Query: 461 RYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEYWKFNNQILKV 517
+ + + + GYPK I G P + + A + G TYF+ +YW+++ +
Sbjct: 1116 --AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANKYWRYDEYKRSM 1289
Query: 518 EPGYPRSILKDFMGCDGPTD 537
+P YP+ I DF G D
Sbjct: 1290 DPSYPKMIAHDFPGIGHKVD 1349
>emb|X58256.1|BTCLG Bovine CLG mRNA for collagenase
Length = 2025
Score = 278 bits (711), Expect = 1e-72
Identities = 174/483 (36%), Positives = 245/483 (50%), Gaps = 8/483 (1%)
Frame = +3
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
V+ +L+ Y L ++ R+ + L MQ+F+G+ +TGK D T++ MK+PRCG
Sbjct: 111 VKKYLENYYNLNSNGKKVERQRNGGLITEKLKQMQKFFGLRVTGKPDAETLNVMKQPRCG 290
Query: 103 VPDQTRGSSKFNIRRKRYALTGQK--WQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQ 160
VPD + LT K W++ ++TY I+N TP + + +AI +AF +W
Sbjct: 291 VPDVAP-----------FVLTPGKSCWENTNLTYRIENYTPDLSRADVDQAIEKAFQLWS 437
Query: 161 NVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDT 220
NVTPLTF +V + DI I F G H D+SPFDG GG LAHA+ PG GIGGD
Sbjct: 438 NVTPLTFTKVSEGQ-------ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGAGIGGDA 596
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT N +L+ VA HE GH+LGL HS D A+M P Y + + + +L
Sbjct: 597 HFDDDEWWT---SNFQDYNLYRVAAHEFGHSLGLAHSTDIGALMYPSYTF--SGDVQLSQ 761
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ IYG P
Sbjct: 762 DDIDGIQAIYGPSQNPTQPVGPQT-----------------------------------P 836
Query: 341 NICDG--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAVYE 397
+CD F+ + +R E+ FKD+++ +R N + + I+ FW LP + A YE
Sbjct: 837 EVCDSKLTFDAITTIRGEVMFFKDRFY--MRTNPLYPEVELNFISVFWPQLPNGLQAAYE 1010
Query: 398 NSDGNFV-FFKGNKYWVFKDTTLQPGYPHDLI-TLGNGIPPHGIDSAIWWEDVGKTYFFK 455
+D + V FFKGNKYW K + GYP D+ + G ID+A+ ED GKTYFF
Sbjct: 1011VADRDEVRFFKGNKYWAVKGQDVLRGYPRDIYRSFGFPRTVKSIDAAVSEEDTGKTYFFV 1190
Query: 456 GDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
++ WRY E ++MD GYPK I + GI F ++ GF YF+ G+ +KF+ Q
Sbjct: 1191ANKCWRYDEYKQSMDAGYPKMIAEDFPGIGNKVDAVF--QKGGFFYFFHGRRQYKFDPQT 1364
Query: 515 LKV 517
++
Sbjct: 1365KRI 1373
Score = 59.3 bits (142), Expect = 1e-06
Identities = 39/140 (27%), Positives = 65/140 (45%), Gaps = 3/140 (2%)
Frame = +3
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
G +FFK Y + L P + I++ P+G+ +A D + FFKG++YW
Sbjct: 885 GEVMFFKDRFY--MRTNPLYPEVELNFISVFWPQLPNGLQAAYEVADRDEVRFFKGNKYW 1058
Query: 461 RYSEEMKTMDPGYPKPITIWKGIP---ESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
+ + GYP+ I G P +S A ++ G TYF+ + W+++ +
Sbjct: 1059 AVKGQ--DVLRGYPRDIYRSFGFPRTVKSIDAAVSEEDTGKTYFFVANKCWRYDEYKQSM 1232
Query: 518 EPGYPRSILKDFMGCDGPTD 537
+ GYP+ I +DF G D
Sbjct: 1233 DAGYPKMIAEDFPGIGNKVD 1292
>emb|X66402.1|MMSTLY M.musculus mRNA for stromelysin 1
Length = 1740
Score = 278 bits (711), Expect = 1e-72
Identities = 180/509 (35%), Positives = 244/509 (47%), Gaps = 14/509 (2%)
Frame = +1
Query: 23 LQTLLWILCATVCGTEQYFN-----------VEVWLQKYGYLPPTDPRMSVLRSAETMQS 71
L LLW LC VC + + ++ +L+ Y L + + + +
Sbjct: 34 LPVLLW-LCVVVCSSYPLHDSARDDDAGMELLQKYLENYYGLAKDVKQFIKKKDSSLIVK 210
Query: 72 ALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKH 131
+ MQ+F G+ MTGK+D NT++ M KPRCGVPD G S F KW+ H
Sbjct: 211 KIQEMQKFLGLEMTGKLDSNTMELMHKPRCGVPD-VGGFSTFP--------GSPKWRKSH 363
Query: 132 ITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASG 191
ITY I N TP + AI +A VW+ VTPLTF + E DI I FA G
Sbjct: 364 ITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSRISEGE-------ADIMISFAVG 522
Query: 192 FHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHA 251
HGD PFDG G LAHAY PGPGI GD HFD DE WT + G +LFLVA HELGH+
Sbjct: 523 EHGDFVPFDGPGTVLAHAYAPGPGINGDAHFDDDERWT---EDVTGTNLFLVAAHELGHS 693
Query: 252 LGLEHSNDPTAIMAPFYQ-YMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHR 310
LGL HS A+M P Y+ + F L DD+ GIQ +YG
Sbjct: 694 LGLYHSAKAEALMYPVYKSSTDLSRFHLSQDDVDGIQSLYGTPTASPDVLVVPTKSNSLE 873
Query: 311 SVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRN 370
F+ ++ LR E+ FKD+ FWR ++
Sbjct: 874 PETSPMCSSTLF------------------------FDAVSTLRGEVLFFKDRHFWR-KS 978
Query: 371 NRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF-FKGNKYWVFKDTTLQPGYPHDLIT 429
R + I+ FW LP ++DA YE ++ + VF FKGN++W + GYP + T
Sbjct: 979 LRTPEPEFYLISSFWPSLPSNMDAAYEVTNRDTVFIFKGNQFWAIRGHEELAGYPKSIHT 1158
Query: 430 LGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQ 488
LG ID+AI ++ KTYFF D+YWR+ E+ ++M+PG+P+ I + G+
Sbjct: 1159LGLPATVKKIDAAISNKEKRKTYFFVEDKYWRFDEKKQSMEPGFPRKIAEDFPGVDSRVD 1338
Query: 489 GAFVHKENGFTYFYKGKEYWKFNNQILKV 517
F + GF YF+ G +F+ KV
Sbjct: 1339AVF--EAFGFLYFFSGSSQLEFDPNAKKV 1419
Score = 66.6 bits (161), Expect = 7e-09
Identities = 46/142 (32%), Positives = 71/142 (49%), Gaps = 5/142 (3%)
Frame = +1
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
G +FFK +W T +P + LI+ P +D+A + + FKG+++W
Sbjct: 934 GEVLFFKDRHFWRKSLRTPEPEFY--LISSFWPSLPSNMDAAYEVTNRDTVFIFKGNQFW 1107
Query: 461 --RYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEYWKFNNQIL 515
R EE+ GYPK I G+P + + A +KE TYF+ +YW+F+ +
Sbjct: 1108 AIRGHEELA----GYPKSIHTL-GLPATVKKIDAAISNKEKRKTYFFVEDKYWRFDEKKQ 1272
Query: 516 KVEPGYPRSILKDFMGCDGPTD 537
+EPG+PR I +DF G D D
Sbjct: 1273 SMEPGFPRKIAEDFPGVDSRVD 1338
>ref|NM_008606.1| Mus musculus matrix metalloproteinase 11 (Mmp11), mRNA
Length = 2246
Score = 278 bits (710), Expect = 1e-72
Identities = 157/439 (35%), Positives = 223/439 (50%), Gaps = 1/439 (0%)
Frame = +2
Query: 100 RCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVW 159
RCGVPD + N R+KR+ L+G +W+ +TY I ++ + R+ + A VW
Sbjct: 257 RCGVPDLPDVLNARN-RQKRFVLSGGRWEKTDLTYRILRFPWQLVREQVRQTVAEALQVW 433
Query: 160 QNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
VTPLTF EV G+ DI I FA +HGD+ PFDG GG LAHA+FP GD
Sbjct: 434 SEVTPLTFTEV-----HEGR--ADIMIDFARYWHGDNLPFDGPGGILAHAFFPKTHREGD 592
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
HFD DE WT+G ++ G DL VA HE GH LGL+H+ A+M+PFY + L
Sbjct: 593 VHFDYDETWTIG--DNQGTDLLQVAAHEFGHVLGLQHTTAAKALMSPFYTFRYP--LSLS 760
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
DD +GIQ +YG +
Sbjct: 761 PDDRRGIQHLYG----------------RPQMAPTSPAPTLSSQAGTDTNEIALLEPETP 892
Query: 340 PNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
P++C+ +F+ ++ +R E+F FK + WR+R+ R+ GYP + W+GLP +DA +E++
Sbjct: 893 PDVCETSFDAVSTIRGELFFFKAGFVWRLRSGRLQPGYPALASRHWQGLPSPVDAAFEDA 1072
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLG-NGIPPHGIDSAIWWEDVGKTYFFKGDR 458
G FF+G +YWV+ G P L LG G P H + +W + K YFF+G
Sbjct: 1073QGQIWFFQGAQYWVYDGEKPVLG-PAPLSKLGLQGSPVHA--ALVWGPEKNKIYFFRGGD 1243
Query: 459 YWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVE 518
YWR+ + +D P+ T W+G+P AF E G+ YF +G YWKF+ +KV
Sbjct: 1244YWRFHPRTQRVDNPVPRRSTDWRGVPSEIDAAFQDAE-GYAYFLRGHLYWKFDPVKVKVL 1420
Query: 519 PGYPRSILKDFMGCDGPTD 537
G+PR + DF C P +
Sbjct: 1421EGFPRPVGPDFFDCAEPAN 1477
>emb|Z12604.1|MMSTRMLY3 M.musculus mRNA for stromelysin-3
Length = 2246
Score = 278 bits (710), Expect = 1e-72
Identities = 157/439 (35%), Positives = 223/439 (50%), Gaps = 1/439 (0%)
Frame = +2
Query: 100 RCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVW 159
RCGVPD + N R+KR+ L+G +W+ +TY I ++ + R+ + A VW
Sbjct: 257 RCGVPDLPDVLNARN-RQKRFVLSGGRWEKTDLTYRILRFPWQLVREQVRQTVAEALQVW 433
Query: 160 QNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
VTPLTF EV G+ DI I FA +HGD+ PFDG GG LAHA+FP GD
Sbjct: 434 SEVTPLTFTEV-----HEGR--ADIMIDFARYWHGDNLPFDGPGGILAHAFFPKTHREGD 592
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
HFD DE WT+G ++ G DL VA HE GH LGL+H+ A+M+PFY + L
Sbjct: 593 VHFDYDETWTIG--DNQGTDLLQVAAHEFGHVLGLQHTTAAKALMSPFYTFRYP--LSLS 760
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
DD +GIQ +YG +
Sbjct: 761 PDDRRGIQHLYG----------------RPQMAPTSPAPTLSSQAGTDTNEIALLEPETP 892
Query: 340 PNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
P++C+ +F+ ++ +R E+F FK + WR+R+ R+ GYP + W+GLP +DA +E++
Sbjct: 893 PDVCETSFDAVSTIRGELFFFKAGFVWRLRSGRLQPGYPALASRHWQGLPSPVDAAFEDA 1072
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLG-NGIPPHGIDSAIWWEDVGKTYFFKGDR 458
G FF+G +YWV+ G P L LG G P H + +W + K YFF+G
Sbjct: 1073QGQIWFFQGAQYWVYDGEKPVLG-PAPLSKLGLQGSPVHA--ALVWGPEKNKIYFFRGGD 1243
Query: 459 YWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVE 518
YWR+ + +D P+ T W+G+P AF E G+ YF +G YWKF+ +KV
Sbjct: 1244YWRFHPRTQRVDNPVPRRSTDWRGVPSEIDAAFQDAE-GYAYFLRGHLYWKFDPVKVKVL 1420
Query: 519 PGYPRSILKDFMGCDGPTD 537
G+PR + DF C P +
Sbjct: 1421EGFPRPVGPDFFDCAEPAN 1477
>gb|M25664.1|RABSTROM Rabbit metalloproteinase synovial cell activator mRNA, complete cds
Length = 1795
Score = 277 bits (708), Expect = 2e-72
Identities = 179/512 (34%), Positives = 254/512 (48%), Gaps = 17/512 (3%)
Frame = +1
Query: 23 LQTLLWILCATVCG------------TEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQ 70
L TLL +LC +C T ++ +L+ Y L + + + +
Sbjct: 61 LPTLL-LLCVALCSAYPLDGASRDADTTNMDLLQQYLENYYNLEKDVKQFVKRKDSSPVV 237
Query: 71 SALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHK 130
+ MQ+F G+ +TGK+D NT++ ++KPRCGVPD S+ KW
Sbjct: 238 KKIQEMQKFLGLEVTGKLDSNTLEVIRKPRCGVPDVGHFSTFPGT---------PKWTKT 390
Query: 131 HITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFAS 190
H+TY I N TP + AI +A VW+ VTPLTF E DI I F
Sbjct: 391 HLTYRIVNYTPDLPRDAVDAAIEKALKVWEEVTPLTFSRKYEGE-------ADIMISFGV 549
Query: 191 GFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGH 250
HGD PFDG G LAHAY PGPGI GD HFD DE WT + G +LFLVA HELGH
Sbjct: 550 REHGDFIPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT---KDTTGTNLFLVAAHELGH 720
Query: 251 ALGLEHSNDPTAIMAPFYQ-YMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXH 309
+LGL HS +P A+M P Y + + F+L DD+ GIQ +YG
Sbjct: 721 SLGLFHSANPEALMYPVYNAFTDLARFRLSQDDVDGIQSLYGPAPASPDNSGVPMEPVPP 900
Query: 310 RSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDG--NFNTLAILRREMFVFKDQWFWR 367
S P +CD +F+ ++ LR E+ FKD++FWR
Sbjct: 901 GS--------------------------GTPVMCDPDLSFDAISTLRGEILFFKDRYFWR 1002
Query: 368 VRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF-FKGNKYWVFKDTTLQPGYPHD 426
++ R+++ I+ FW LP ++DA YE + VF FKG ++W + +Q GYP
Sbjct: 1003-KSLRILEPEFHLISSFWPSLPSAVDAAYEVISRDTVFIFKGTQFWAIRGNEVQAGYPRS 1179
Query: 427 LITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPE 485
+ TLG ID+AI ++ KTYFF D+YWR+ E+ ++++PG+P+ I + GI
Sbjct: 1180IHTLGFPSTIRKIDAAISDKERKKTYFFVEDKYWRFDEKRQSLEPGFPRHIAEDFPGI-- 1353
Query: 486 SPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
+P+ V + GF YF+ G +F+ KV
Sbjct: 1354NPKIDAVFEAFGFFYFFSGSSQSEFDPNAKKV 1449
Score = 60.1 bits (144), Expect = 6e-07
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 3/150 (2%)
Frame = +1
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGK 450
S DA+ G +FFK +W L+P + LI+ P +D+A
Sbjct: 937 SFDAI-STLRGEILFFKDRYFWRKSLRILEPEF--HLISSFWPSLPSAVDAAYEVISRDT 1107
Query: 451 TYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEY 507
+ FKG ++W + GYP+ I G P + + A KE TYF+ +Y
Sbjct: 1108 VFIFKGTQFWAIRGN--EVQAGYPRSIHTL-GFPSTIRKIDAAISDKERKKTYFFVEDKY 1278
Query: 508 WKFNNQILKVEPGYPRSILKDFMGCDGPTD 537
W+F+ + +EPG+PR I +DF G + D
Sbjct: 1279 WRFDEKRQSLEPGFPRHIAEDFPGINPKID 1368
>ref|NM_008607.1| Mus musculus matrix metalloproteinase 13 (Mmp13), mRNA
Length = 2660
Score = 275 bits (703), Expect = 9e-72
Identities = 170/483 (35%), Positives = 243/483 (50%), Gaps = 7/483 (1%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+ Y Y P T + + + L MQ F+G+ +TGK+D T+D M+KPRCGV
Sbjct: 131 EHYLKSY-YHPATLAGILKKSTVTSTVDRLREMQSFFGLEVTGKLDDPTLDIMRKPRCGV 307
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVT 163
PD ++N+ + KW ++TY I N TP + E +A R+AF VW +VT
Sbjct: 308 PDV----GEYNVFPRTL-----KWSQTNLTYRIVNYTPDMSHSEVEKAFRKAFKVWSDVT 460
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PL F + + +G DI I F + HGD PFDG G LAHA+ PGP GGD HFD
Sbjct: 461 PLNF-----TRIYDGT--ADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFD 619
Query: 224 SDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDL 283
DE WT + G +LF+VA HELGH+LGL+HS DP A+M P Y Y +F LP+DD+
Sbjct: 620 DDETWTSSSK---GYNLFIVAAHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDV 790
Query: 284 QGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNIC 343
QGIQ +YG P C
Sbjct: 791 QGIQFLYGPGDEDPNPKHPKT-----------------------------------PEKC 865
Query: 344 DG--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDG 401
D + + + LR E +FKD++FWR+ +V + FW LP +DA YE+
Sbjct: 866 DPALSLDAITSLRGETMIFKDRFFWRLHPQQV-EAELFLTKSFWPELPNHVDAAYEHPSR 1042
Query: 402 NFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
+ +F F+G K+W + GYP + LG + +A+ +E+ GKT FF + W
Sbjct: 1043DLMFIFRGRKFWALNGYDILEGYPRKISDLGFPKEVKRLSAAVHFENTGKTLFFSENHVW 1222
Query: 461 RYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGK---EYWKFNNQILK 516
Y + +TMD YP+ I + GI V+++NG+ YF+ G EY ++N+I++
Sbjct: 1223SYDDVNQTMDKDYPRLIEEEFPGIGNKVDA--VYEKNGYIYFFNGPIQFEYSIWSNRIVR 1396
Query: 517 VEP 519
V P
Sbjct: 1397VMP 1405
>emb|X66473.1|MMPCOLLAG M.musculus mRNA for (pro)collagenase
Length = 2660
Score = 275 bits (703), Expect = 9e-72
Identities = 170/483 (35%), Positives = 243/483 (50%), Gaps = 7/483 (1%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+ Y Y P T + + + L MQ F+G+ +TGK+D T+D M+KPRCGV
Sbjct: 131 EHYLKSY-YHPATLAGILKKSTVTSTVDRLREMQSFFGLEVTGKLDDPTLDIMRKPRCGV 307
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVT 163
PD ++N+ + KW ++TY I N TP + E +A R+AF VW +VT
Sbjct: 308 PDV----GEYNVFPRTL-----KWSQTNLTYRIVNYTPDMSHSEVEKAFRKAFKVWSDVT 460
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PL F + + +G DI I F + HGD PFDG G LAHA+ PGP GGD HFD
Sbjct: 461 PLNF-----TRIYDGT--ADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFD 619
Query: 224 SDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDL 283
DE WT + G +LF+VA HELGH+LGL+HS DP A+M P Y Y +F LP+DD+
Sbjct: 620 DDETWTSSSK---GYNLFIVAAHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDV 790
Query: 284 QGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNIC 343
QGIQ +YG P C
Sbjct: 791 QGIQFLYGPGDEDPNPKHPKT-----------------------------------PEKC 865
Query: 344 DG--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDG 401
D + + + LR E +FKD++FWR+ +V + FW LP +DA YE+
Sbjct: 866 DPALSLDAITSLRGETMIFKDRFFWRLHPQQV-EAELFLTKSFWPELPNHVDAAYEHPSR 1042
Query: 402 NFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
+ +F F+G K+W + GYP + LG + +A+ +E+ GKT FF + W
Sbjct: 1043DLMFIFRGRKFWALNGYDILEGYPRKISDLGFPKEVKRLSAAVHFENTGKTLFFSENHVW 1222
Query: 461 RYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGK---EYWKFNNQILK 516
Y + +TMD YP+ I + GI V+++NG+ YF+ G EY ++N+I++
Sbjct: 1223SYDDVNQTMDKDYPRLIEEEFPGIGNKVDA--VYEKNGYIYFFNGPIQFEYSIWSNRIVR 1396
Query: 517 VEP 519
V P
Sbjct: 1397VMP 1405
>dbj|D82054.1|D82054 Cynops pyrrhogaster mRNA for stromelysin-1/2-b, complete cds
Length = 1619
Score = 272 bits (696), Expect = 6e-71
Identities = 173/482 (35%), Positives = 238/482 (48%), Gaps = 6/482 (1%)
Frame = +3
Query: 42 NVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
+VE +L+KY Y +D + ++A + + MQ+F G+ +TGKVD NT++ M++PRC
Sbjct: 144 DVEEYLKKY-YGLNSDKTPDLRKAASPLAEKIREMQKFCGLQVTGKVDSNTLEVMQQPRC 320
Query: 102 GVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQN 161
GV D S F R W+ +TY I N TP + + AI++AF VW +
Sbjct: 321 GVSD-VAAYSTFPGR--------PAWRTHALTYRILNYTPDMARADVDTAIQKAFKVWSD 473
Query: 162 VTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTH 221
VTPLTF ++ Y DI I F + HGD +PFDG G LAHA+ PG GIGGD H
Sbjct: 474 VTPLTFTQIYYGT-------ADIQISFGAREHGDFNPFDGPYGTLAHAFAPGTGIGGDAH 632
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FD DE W+ + G +LFLVA HE GH+LGL HSND A+M P Y Y + F+LP D
Sbjct: 633 FDEDEKWSKVST---GTNLFLVAAHEFGHSLGLSHSNDRNALMFPTYSYTDPARFRLPKD 803
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPN 341
D+ GIQ IYG A +
Sbjct: 804 DINGIQAIYG-------------------------------PSRKPSPQTPPPTKPALQS 890
Query: 342 ICDG--NFNTLAILRREMFVFKDQWFWR--VRNNRVMDGYPMQITYFWRGLPPSIDAVYE 397
CD ++ + LR E+ F + F R R++ I+ W LP I A YE
Sbjct: 891 YCDPAIRWDAITTLRNEILFFNGRTFLRSMPHTGRIIS---YTISAVWPSLPSGIHAAYE 1061
Query: 398 NSDGNFV-FFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKG 456
N + V FKGNKYW K + P YP ++ TLG ID+A++ D KTY+F
Sbjct: 1062NQQKDQVLLFKGNKYWAMKGYQMLPNYPQNIYTLGLPRTVTRIDAAVYHPDTRKTYYFVN 1241
Query: 457 DRYWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQIL 515
D+YW + E ++ MD P+ I T + I F K G YF+ G+ ++FN ++
Sbjct: 1242DKYWSFDEALQVMDKDSPQQIVTTFPRIGTKVDAVFYAK--GLLYFFNGQHQFEFNMRLK 1415
Query: 516 KV 517
KV
Sbjct: 1416KV 1421
Score = 42.4 bits (98), Expect = 0.13
Identities = 26/97 (26%), Positives = 44/97 (44%), Gaps = 3/97 (3%)
Frame = +3
Query: 436 PHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESP---QGAFV 492
P GI +A + + FKG++YW M P YP+ I G+P + A
Sbjct: 1035 PSGIHAAYENQQKDQVLLFKGNKYWAMKGYQ--MLPNYPQNIYTL-GLPRTVTRIDAAVY 1205
Query: 493 HKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDF 529
H + TY++ +YW F+ + ++ P+ I+ F
Sbjct: 1206 HPDTRKTYYFVNDKYWSFDEALQVMDKDSPQQIVTTF 1316
>ref|XM_058069.2| Homo sapiens matrix metalloproteinase 12 (macrophage elastase)
(MMP12), mRNA
Length = 1779
Score = 150 bits (378), Expect(2) = 7e-71
Identities = 90/276 (32%), Positives = 140/276 (50%), Gaps = 4/276 (1%)
Frame = +3
Query: 240 LFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXX 299
LFL AVHE+GH+LGL HS+DP A+M P Y+Y++ + F+L DD++GIQ +YG
Sbjct: 645 LFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDPKENQRL 824
Query: 300 XXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGN--FNTLAILRREM 357
++P +CD N F+ + + ++
Sbjct: 825 PNPD---------------------------------NSEPALCDPNLSFDAVTTVGNKI 905
Query: 358 FVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF-FKGNKYWVFKD 416
F FKD++FW + R + I+ W LP I+A YE N VF FK +KYW+ +
Sbjct: 906 FFFKDRFFWLKVSERPKTSVNL-ISSLWPTLPSGIEAAYEIEARNQVFLFKDDKYWLISN 1082
Query: 417 TTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKP 476
+P YP + + G ID+A++ +TYFF ++YWRY E + MDPGYPK
Sbjct: 1083LRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDNQYWRYDERRQMMDPGYPKL 1262
Query: 477 IT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
IT ++GI F + +N + YF++G ++++
Sbjct: 1263ITKNFQGIGPKIDAVF-YSKNKYYYFFQGSNQFEYD 1367
Score = 144 bits (363), Expect(2) = 7e-71
Identities = 80/187 (42%), Positives = 104/187 (54%), Gaps = 1/187 (0%)
Frame = +1
Query: 44 EVWLQK-YGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
E +L+K YG P + S M+ + MQ F G+ +TG++D +T++ M PRCG
Sbjct: 112 ERYLEKFYGLEINKLPVTKMKYSGNLMKEKIQEMQHFLGLKVTGQLDTSTLEMMHAPRCG 291
Query: 103 VPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNV 162
VPD + R G W+ +ITY I N TP + + AIR+AF VW NV
Sbjct: 292 VPD---------VHHFREMPGGPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNV 444
Query: 163 TPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPL F S++ G DI ++FA G HGD FDG+GG LAHA+ PG GIGGD HF
Sbjct: 445 TPLKF-----SKINTGM--ADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHF 603
Query: 223 DSDEPWT 229
D DE WT
Sbjct: 604 DEDEFWT 624
Score = 60.8 bits (146), Expect = 4e-07
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Frame = +3
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGK 450
S DAV + GN +FF ++++ K + +P +LI+ P GI++A E +
Sbjct: 870 SFDAV--TTVGNKIFFFKDRFFWLK-VSERPKTSVNLISSLWPTLPSGIEAAYEIEARNQ 1040
Query: 451 TYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIP---ESPQGAFVHKENGFTYFYKGKEY 507
+ FK D+YW S +P YPK I + G P + A + TYF+ +Y
Sbjct: 1041 VFLFKDDKYWLISNLRP--EPNYPKSIHSF-GFPNFVKKIDAAVFNPRFYRTYFFVDNQY 1211
Query: 508 WKFNNQILKVEPGYPRSILKDFMG 531
W+++ + ++PGYP+ I K+F G
Sbjct: 1212 WRYDERRQMMDPGYPKLITKNFQG 1283
>ref|NM_012980.1| Rattus norvegicus Matrix metalloproteinase 11 (stromelysin 3)
(Mmp11), mRNA
Length = 2236
Score = 271 bits (692), Expect = 2e-70
Identities = 155/439 (35%), Positives = 219/439 (49%), Gaps = 1/439 (0%)
Frame = +1
Query: 100 RCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVW 159
RCGVPD + N R+KR+ L+G +W+ +TY I ++ + R+ + A VW
Sbjct: 262 RCGVPDPPDVLNARN-RQKRFVLSGGRWEKTDLTYRILRFPWQLVREQVRQTVAEALRVW 438
Query: 160 QNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
VTPLTF EV G+ DI I F +HGD+ PFDG GG LAHA+FP GD
Sbjct: 439 SEVTPLTFTEV-----HEGR--ADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGD 597
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
HFD DE WT+G+ G DL VA HE GH LGL+H+ A+M+PFY + L
Sbjct: 598 VHFDYDETWTIGD---KGTDLLQVAAHEFGHVLGLQHTTAAKALMSPFYTFRYP--LSLS 762
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
DD +GIQ +YG +
Sbjct: 763 PDDRRGIQHLYG----------------RPQLTPTSPTPTLSSQAGTDTNEIALQEPEVP 894
Query: 340 PNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
P +C+ +F+ ++ +R E+F FK + WR+R+ ++ GYP + W+GLP +DA +E++
Sbjct: 895 PEVCETSFDAVSTIRGELFFFKAGFVWRLRSGQLQPGYPALASRHWQGLPSPVDAAFEDA 1074
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLG-NGIPPHGIDSAIWWEDVGKTYFFKGDR 458
G FF+G +YWV+ G P L LG G P H + +W + K YFF+G
Sbjct: 1075QGQIWFFQGAQYWVYDGEKPVLG-PAPLSKLGLQGSPVHA--ALVWGPEKNKIYFFRGGD 1245
Query: 459 YWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVE 518
YWR+ + +D P+ T W+G+P AF E G+ YF +G YWKF+ +KV
Sbjct: 1246YWRFHPRTQRVDNPVPRRTTDWRGVPSEIDAAFQDAE-GYAYFLRGHLYWKFDPVKVKVL 1422
Query: 519 PGYPRSILKDFMGCDGPTD 537
+PR I DF C P +
Sbjct: 1423ESFPRPIGPDFFDCAEPAN 1479
>gb|U46034.1|RNU46034 Rattus norvegicus stromelysin 3 mRNA, complete cds
Length = 2236
Score = 271 bits (692), Expect = 2e-70
Identities = 155/439 (35%), Positives = 219/439 (49%), Gaps = 1/439 (0%)
Frame = +1
Query: 100 RCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVW 159
RCGVPD + N R+KR+ L+G +W+ +TY I ++ + R+ + A VW
Sbjct: 262 RCGVPDPPDVLNARN-RQKRFVLSGGRWEKTDLTYRILRFPWQLVREQVRQTVAEALRVW 438
Query: 160 QNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
VTPLTF EV G+ DI I F +HGD+ PFDG GG LAHA+FP GD
Sbjct: 439 SEVTPLTFTEV-----HEGR--ADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGD 597
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
HFD DE WT+G+ G DL VA HE GH LGL+H+ A+M+PFY + L
Sbjct: 598 VHFDYDETWTIGD---KGTDLLQVAAHEFGHVLGLQHTTAAKALMSPFYTFRYP--LSLS 762
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
DD +GIQ +YG +
Sbjct: 763 PDDRRGIQHLYG----------------RPQLTPTSPTPTLSSQAGTDTNEIALQEPEVP 894
Query: 340 PNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
P +C+ +F+ ++ +R E+F FK + WR+R+ ++ GYP + W+GLP +DA +E++
Sbjct: 895 PEVCETSFDAVSTIRGELFFFKAGFVWRLRSGQLQPGYPALASRHWQGLPSPVDAAFEDA 1074
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLG-NGIPPHGIDSAIWWEDVGKTYFFKGDR 458
G FF+G +YWV+ G P L LG G P H + +W + K YFF+G
Sbjct: 1075QGQIWFFQGAQYWVYDGEKPVLG-PAPLSKLGLQGSPVHA--ALVWGPEKNKIYFFRGGD 1245
Query: 459 YWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVE 518
YWR+ + +D P+ T W+G+P AF E G+ YF +G YWKF+ +KV
Sbjct: 1246YWRFHPRTQRVDNPVPRRTTDWRGVPSEIDAAFQDAE-GYAYFLRGHLYWKFDPVKVKVL 1422
Query: 519 PGYPRSILKDFMGCDGPTD 537
+PR I DF C P +
Sbjct: 1423ESFPRPIGPDFFDCAEPAN 1479
>gb|AF062392.1|AF062392 Gallus gallus matrix metalloproteinase mRNA, complete cds
Length = 1587
Score = 271 bits (692), Expect = 2e-70
Identities = 169/473 (35%), Positives = 226/473 (47%), Gaps = 4/473 (0%)
Frame = +3
Query: 43 VEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCG 102
VE +L K+ + + +AE L MQ+F+G+ +TGK D T++ MKKPRCG
Sbjct: 162 VEDYLSKFYTIETDSNQRGWKANAEFTAEKLQKMQRFFGLKVTGKPDTETLEMMKKPRCG 341
Query: 103 VPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNV 162
VPD Y +T W+ ++TY I N TP + +AI++AF V
Sbjct: 342 VPDVGL-----------YGVTLPGWKKNNLTYRIVNYTPDLSKEVVDKAIQKAFKARSTV 488
Query: 163 TPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSP-FDGEGGFLAHAYFPGPGIGGDTH 221
TPL F + + DI + F + HG FDG G LAHA+ PG G GGD H
Sbjct: 489 TPLIFARIQ-------EGIADIMVAFGTKAHGHCPRYFDGPLGVLAHAFPPGSGFGGDVH 647
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
FD DE WT+G+ DG +LFLVA HE+GHALGL H ND A M P Y Y+ F L D
Sbjct: 648 FDEDEDWTMGS---DGFNLFLVAAHEVGHALGLSHPNDQRAFMFPNYAYISPSEFPLSPD 818
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPN 341
D+ GIQ IYG PN
Sbjct: 819 DISGIQSIYG---------------------------------SATKTPGKRPTVPTSPN 899
Query: 342 ICDG--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
C +F+ + LRRE+ K + WRV + + I+ FW LP I A YEN
Sbjct: 900 TCGPQISFDAVTTLRREVIFLKGRHLWRVYPDNSEVELEL-ISAFWPFLPSGIQAAYENM 1076
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
+FFKGN +WV + GYP ++ TLG ID+A+ ++ GKT FF GD+Y
Sbjct: 1077KDRILFFKGNNFWVVSGYKVLLGYPKNINTLGFPKGVKKIDAAVCNKNTGKTDFFVGDKY 1256
Query: 460 WRYSEEMKTMDPGYP-KPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
WRY E ++M+ GYP + + + GI + F HK G YF+ G KF+
Sbjct: 1257WRYDESTQSMEKGYPRRTVNDFPGISQRIDAVFQHK--GLFYFFHGSRQLKFD 1409
>gb|AF009922.1|AF009922 Bos taurus enamel metalloproteinase precursor mRNA, complete cds
Length = 2123
Score = 270 bits (691), Expect = 2e-70
Identities = 167/481 (34%), Positives = 241/481 (49%), Gaps = 7/481 (1%)
Frame = +2
Query: 40 YFNVEVWLQKYGYLPPTDPRMS--VLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMK 97
Y + +L KY Y P++ V R + + +Q+F+G+ +TGK+DR T+D +K
Sbjct: 110 YRLAQAYLDKY-YTKKGGPQIGEMVARGGNSTVKKIKELQEFFGLRVTGKLDRATMDVIK 286
Query: 98 KPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFD 157
+PRCGVPD + R KW+ +TY I TP + E RA+ A
Sbjct: 287 RPRCGVPD---------VANYRLFPGEPKWKKNTLTYRISKYTPSMTPAEVDRAMEMALR 439
Query: 158 VWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 217
W + PL F + E DI I F +G HGDS PFDG G LAHA+ PG G+G
Sbjct: 440 AWSSAVPLNFVRINAGE-------ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLG 598
Query: 218 GDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFK 277
GDTHFD+ E WT+G +G +LF VA HE GHALGL HS DP+A+M P Y+Y F+
Sbjct: 599 GDTHFDNAEKWTMGT---NGFNLFTVAAHEFGHALGLAHSTDPSALMFPTYKYQNPYGFR 769
Query: 278 LPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXG 337
LP DD++GIQ +YG + S+
Sbjct: 770 LPKDDVKGIQALYGPRRAFSGKPTAPHGPPHNPSI------------------------- 874
Query: 338 AKPNICDGN--FNTLAILRREMFVFKDQWFWRVRNNRVMDGY-PMQITYFWRGLPPSIDA 394
P++CD N F+ + +L +E+ +F+D+ FWR R +M G P IT + L ++DA
Sbjct: 875 --PDLCDSNLSFDAVTMLGKELLLFRDRIFWR-RQVHLMSGIRPSTITSSFPQLMSNVDA 1045
Query: 395 VYENSD-GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYF 453
YE ++ G FFKG YW+ + +Q G P + G ID+A++ +D KT F
Sbjct: 1046AYEVAERGTAYFFKGPHYWITRGFQMQ-GPPRTIYDFGFPRYVQRIDAAVYLKDAQKTLF 1222
Query: 454 FKGDRYWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNN 512
F GD Y+ Y E + M+ YPK + G+ A + NG+ YF+ G + +K +
Sbjct: 1223FVGDEYYSYDERKRKMEKDYPKSTEEEFSGVNGQIDAAV--ELNGYIYFFSGPKAYKSDT 1396
Query: 513 Q 513
+
Sbjct: 1397E 1399
>ref|XM_040728.1| Homo sapiens matrix metalloproteinase 10 (stromelysin 2) (MMP10),
mRNA
Length = 1743
Score = 268 bits (686), Expect = 9e-70
Identities = 179/501 (35%), Positives = 250/501 (49%), Gaps = 16/501 (3%)
Frame = +2
Query: 27 LWILCATVCGT--------EQYFNVEV---WLQKYGYLPPTDPRMSVLRSAETMQSALAA 75
L +LC VC E+ N ++ +L+KY Y D + + + + +
Sbjct: 41 LVLLCLPVCSAYPLSGAAKEEDSNKDLAQQYLEKY-YNLEKDVKQFRRKDSNLIVKKIQG 217
Query: 76 MQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYS 135
MQ+F G+ +TGK+D +T++ M+KPRCGVPD SS + KW+ H+TY
Sbjct: 218 MQKFLGLEVTGKLDTDTLEVMRKPRCGVPDVGHFSSFPGM---------PKWRKTHLTYR 370
Query: 136 IKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGD 195
I N TP + AI +A VW+ VTPLTF S L G + DI I FA HGD
Sbjct: 371 IVNYTPDLPRDAVDSAIEKALKVWEEVTPLTF-----SRLYEG--EADIMISFAVKEHGD 529
Query: 196 SSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLE 255
FDG G LAHAY PGPG+ GD HFD DE WT + G +LFLVA HELGH+LGL
Sbjct: 530 FYSFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWT---EDASGTNLFLVAAHELGHSLGLF 700
Query: 256 HSNDPTAIMAPFY-QYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXX 314
HS + A+M P Y + E F+L DD+ GIQ +YG S
Sbjct: 701 HSANTEALMYPLYNSFTELAQFRLSQDDVNGIQSLYGPPPASTEEPLVPTKSVPSGS--- 871
Query: 315 XXXXXXXXXXXXXXXXXXXXXXGAKPNICDG--NFNTLAILRREMFVFKDQWFWRVRNNR 372
P CD +F+ ++ LR E FKD++FWR R++
Sbjct: 872 -----------------------EMPAKCDPALSFDAISTLRGEYLFFKDRYFWR-RSHW 979
Query: 373 VMDGYPMQITYFWRGLPPSIDAVYE-NSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLG 431
+ I+ FW LP +DA YE NS FKGN++W + +Q GYP + TLG
Sbjct: 980 NPEPEFHLISAFWPSLPSYLDAAYEVNSRDTVFIFKGNEFWAIRGNEVQAGYPRGIHTLG 1159
Query: 432 NGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGA 490
ID+A+ ++ KTYFF D+YWR+ E ++M+ G+P+ I + G+ P+
Sbjct: 1160FPPTIRKIDAAVSDKEKKKTYFFAADKYWRFDENSQSMEQGFPRLIADDFPGV--EPKVD 1333
Query: 491 FVHKENGFTYFYKGKEYWKFN 511
V + GF YF+ G ++F+
Sbjct: 1334AVLQAFGFFYFFSGSSQFEFD 1396
Score = 57.8 bits (138), Expect = 3e-06
Identities = 41/150 (27%), Positives = 66/150 (43%), Gaps = 3/150 (2%)
Frame = +2
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGK 450
S DA+ G ++FFK +W +P + H + +P + +D+A
Sbjct: 902 SFDAI-STLRGEYLFFKDRYFWRRSHWNPEPEF-HLISAFWPSLPSY-LDAAYEVNSRDT 1072
Query: 451 TYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEY 507
+ FKG+ +W + GYP+ I G P + + A KE TYF+ +Y
Sbjct: 1073 VFIFKGNEFWAIRGN--EVQAGYPRGIHTL-GFPPTIRKIDAAVSDKEKKKTYFFAADKY 1243
Query: 508 WKFNNQILKVEPGYPRSILKDFMGCDGPTD 537
W+F+ +E G+PR I DF G + D
Sbjct: 1244 WRFDENSQSMEQGFPRLIADDFPGVEPKVD 1333
>ref|NM_002425.1| Homo sapiens matrix metalloproteinase 10 (stromelysin 2) (MMP10),
mRNA
Length = 1743
Score = 268 bits (686), Expect = 9e-70
Identities = 179/501 (35%), Positives = 250/501 (49%), Gaps = 16/501 (3%)
Frame = +2
Query: 27 LWILCATVCGT--------EQYFNVEV---WLQKYGYLPPTDPRMSVLRSAETMQSALAA 75
L +LC VC E+ N ++ +L+KY Y D + + + + +
Sbjct: 41 LVLLCLPVCSAYPLSGAAKEEDSNKDLAQQYLEKY-YNLEKDVKQFRRKDSNLIVKKIQG 217
Query: 76 MQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYS 135
MQ+F G+ +TGK+D +T++ M+KPRCGVPD SS + KW+ H+TY
Sbjct: 218 MQKFLGLEVTGKLDTDTLEVMRKPRCGVPDVGHFSSFPGM---------PKWRKTHLTYR 370
Query: 136 IKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGD 195
I N TP + AI +A VW+ VTPLTF S L G + DI I FA HGD
Sbjct: 371 IVNYTPDLPRDAVDSAIEKALKVWEEVTPLTF-----SRLYEG--EADIMISFAVKEHGD 529
Query: 196 SSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLE 255
FDG G LAHAY PGPG+ GD HFD DE WT + G +LFLVA HELGH+LGL
Sbjct: 530 FYSFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWT---EDASGTNLFLVAAHELGHSLGLF 700
Query: 256 HSNDPTAIMAPFY-QYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXX 314
HS + A+M P Y + E F+L DD+ GIQ +YG S
Sbjct: 701 HSANTEALMYPLYNSFTELAQFRLSQDDVNGIQSLYGPPPASTEEPLVPTKSVPSGS--- 871
Query: 315 XXXXXXXXXXXXXXXXXXXXXXGAKPNICDG--NFNTLAILRREMFVFKDQWFWRVRNNR 372
P CD +F+ ++ LR E FKD++FWR R++
Sbjct: 872 -----------------------EMPAKCDPALSFDAISTLRGEYLFFKDRYFWR-RSHW 979
Query: 373 VMDGYPMQITYFWRGLPPSIDAVYE-NSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLG 431
+ I+ FW LP +DA YE NS FKGN++W + +Q GYP + TLG
Sbjct: 980 NPEPEFHLISAFWPSLPSYLDAAYEVNSRDTVFIFKGNEFWAIRGNEVQAGYPRGIHTLG 1159
Query: 432 NGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGA 490
ID+A+ ++ KTYFF D+YWR+ E ++M+ G+P+ I + G+ P+
Sbjct: 1160FPPTIRKIDAAVSDKEKKKTYFFAADKYWRFDENSQSMEQGFPRLIADDFPGV--EPKVD 1333
Query: 491 FVHKENGFTYFYKGKEYWKFN 511
V + GF YF+ G ++F+
Sbjct: 1334AVLQAFGFFYFFSGSSQFEFD 1396
Score = 57.8 bits (138), Expect = 3e-06
Identities = 41/150 (27%), Positives = 66/150 (43%), Gaps = 3/150 (2%)
Frame = +2
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGK 450
S DA+ G ++FFK +W +P + H + +P + +D+A
Sbjct: 902 SFDAI-STLRGEYLFFKDRYFWRRSHWNPEPEF-HLISAFWPSLPSY-LDAAYEVNSRDT 1072
Query: 451 TYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEY 507
+ FKG+ +W + GYP+ I G P + + A KE TYF+ +Y
Sbjct: 1073 VFIFKGNEFWAIRGN--EVQAGYPRGIHTL-GFPPTIRKIDAAVSDKEKKKTYFFAADKY 1243
Query: 508 WKFNNQILKVEPGYPRSILKDFMGCDGPTD 537
W+F+ +E G+PR I DF G + D
Sbjct: 1244 WRFDENSQSMEQGFPRLIADDFPGVEPKVD 1333
>emb|X07820.1|HSSTROM2 Human mRNA for metalloproteinase stromelysin-2
Length = 1743
Score = 268 bits (686), Expect = 9e-70
Identities = 179/501 (35%), Positives = 250/501 (49%), Gaps = 16/501 (3%)
Frame = +2
Query: 27 LWILCATVCGT--------EQYFNVEV---WLQKYGYLPPTDPRMSVLRSAETMQSALAA 75
L +LC VC E+ N ++ +L+KY Y D + + + + +
Sbjct: 41 LVLLCLPVCSAYPLSGAAKEEDSNKDLAQQYLEKY-YNLEKDVKQFRRKDSNLIVKKIQG 217
Query: 76 MQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYS 135
MQ+F G+ +TGK+D +T++ M+KPRCGVPD SS + KW+ H+TY
Sbjct: 218 MQKFLGLEVTGKLDTDTLEVMRKPRCGVPDVGHFSSFPGM---------PKWRKTHLTYR 370
Query: 136 IKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGD 195
I N TP + AI +A VW+ VTPLTF S L G + DI I FA HGD
Sbjct: 371 IVNYTPDLPRDAVDSAIEKALKVWEEVTPLTF-----SRLYEG--EADIMISFAVKEHGD 529
Query: 196 SSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLE 255
FDG G LAHAY PGPG+ GD HFD DE WT + G +LFLVA HELGH+LGL
Sbjct: 530 FYSFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWT---EDASGTNLFLVAAHELGHSLGLF 700
Query: 256 HSNDPTAIMAPFY-QYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXX 314
HS + A+M P Y + E F+L DD+ GIQ +YG S
Sbjct: 701 HSANTEALMYPLYNSFTELAQFRLSQDDVNGIQSLYGPPPASTEEPLVPTKSVPSGS--- 871
Query: 315 XXXXXXXXXXXXXXXXXXXXXXGAKPNICDG--NFNTLAILRREMFVFKDQWFWRVRNNR 372
P CD +F+ ++ LR E FKD++FWR R++
Sbjct: 872 -----------------------EMPAKCDPALSFDAISTLRGEYLFFKDRYFWR-RSHW 979
Query: 373 VMDGYPMQITYFWRGLPPSIDAVYE-NSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLG 431
+ I+ FW LP +DA YE NS FKGN++W + +Q GYP + TLG
Sbjct: 980 NPEPEFHLISAFWPSLPSYLDAAYEVNSRDTVFIFKGNEFWAIRGNEVQAGYPRGIHTLG 1159
Query: 432 NGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGA 490
ID+A+ ++ KTYFF D+YWR+ E ++M+ G+P+ I + G+ P+
Sbjct: 1160FPPTIRKIDAAVSDKEKKKTYFFAADKYWRFDENSQSMEQGFPRLIADDFPGV--EPKVD 1333
Query: 491 FVHKENGFTYFYKGKEYWKFN 511
V + GF YF+ G ++F+
Sbjct: 1334AVLQAFGFFYFFSGSSQFEFD 1396
Score = 57.8 bits (138), Expect = 3e-06
Identities = 41/150 (27%), Positives = 66/150 (43%), Gaps = 3/150 (2%)
Frame = +2
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGK 450
S DA+ G ++FFK +W +P + H + +P + +D+A
Sbjct: 902 SFDAI-STLRGEYLFFKDRYFWRRSHWNPEPEF-HLISAFWPSLPSY-LDAAYEVNSRDT 1072
Query: 451 TYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEY 507
+ FKG+ +W + GYP+ I G P + + A KE TYF+ +Y
Sbjct: 1073 VFIFKGNEFWAIRGN--EVQAGYPRGIHTL-GFPPTIRKIDAAVSDKEKKKTYFFAADKY 1243
Query: 508 WKFNNQILKVEPGYPRSILKDFMGCDGPTD 537
W+F+ +E G+PR I DF G + D
Sbjct: 1244 WRFDENSQSMEQGFPRLIADDFPGVEPKVD 1333
>gb|BC002591.1|BC002591 Homo sapiens, matrix metalloproteinase 10 (stromelysin 2), clone
MGC:1704 IMAGE:3140935, mRNA, complete cds
Length = 1773
Score = 268 bits (686), Expect = 9e-70
Identities = 179/501 (35%), Positives = 250/501 (49%), Gaps = 16/501 (3%)
Frame = +1
Query: 27 LWILCATVCGT--------EQYFNVEV---WLQKYGYLPPTDPRMSVLRSAETMQSALAA 75
L +LC VC E+ N ++ +L+KY Y D + + + + +
Sbjct: 52 LVLLCLPVCSAYPLSGAAKEEDSNKDLAQQYLEKY-YNLEKDVKQFRRKDSNLIVKKIQG 228
Query: 76 MQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYS 135
MQ+F G+ +TGK+D +T++ M+KPRCGVPD SS + KW+ H+TY
Sbjct: 229 MQKFLGLEVTGKLDTDTLEVMRKPRCGVPDVGHFSSFPGM---------PKWRKTHLTYR 381
Query: 136 IKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGD 195
I N TP + AI +A VW+ VTPLTF S L G + DI I FA HGD
Sbjct: 382 IVNYTPDLPRDAVDSAIEKALKVWEEVTPLTF-----SRLYEG--EADIMISFAVKEHGD 540
Query: 196 SSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLE 255
FDG G LAHAY PGPG+ GD HFD DE WT + G +LFLVA HELGH+LGL
Sbjct: 541 FYSFDGPGHSLAHAYPPGPGLYGDIHFDDDEKWT---EDASGTNLFLVAAHELGHSLGLF 711
Query: 256 HSNDPTAIMAPFY-QYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXX 314
HS + A+M P Y + E F+L DD+ GIQ +YG S
Sbjct: 712 HSANTEALMYPLYNSFTELAQFRLSQDDVNGIQSLYGPPPASTEEPLVPTKSVPSGS--- 882
Query: 315 XXXXXXXXXXXXXXXXXXXXXXGAKPNICDG--NFNTLAILRREMFVFKDQWFWRVRNNR 372
P CD +F+ ++ LR E FKD++FWR R++
Sbjct: 883 -----------------------EMPAKCDPALSFDAISTLRGEYLFFKDRYFWR-RSHW 990
Query: 373 VMDGYPMQITYFWRGLPPSIDAVYE-NSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLG 431
+ I+ FW LP +DA YE NS FKGN++W + +Q GYP + TLG
Sbjct: 991 NPEPEFHLISAFWPSLPSYLDAAYEVNSRDTVFIFKGNEFWAIRGNEVQAGYPRGIHTLG 1170
Query: 432 NGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGA 490
ID+A+ ++ KTYFF D+YWR+ E ++M+ G+P+ I + G+ P+
Sbjct: 1171FPPTIRKIDAAVSDKEKKKTYFFAADKYWRFDENSQSMEQGFPRLIADDFPGV--EPKVD 1344
Query: 491 FVHKENGFTYFYKGKEYWKFN 511
V + GF YF+ G ++F+
Sbjct: 1345AVLQAFGFFYFFSGSSQFEFD 1407
Score = 57.8 bits (138), Expect = 3e-06
Identities = 41/150 (27%), Positives = 66/150 (43%), Gaps = 3/150 (2%)
Frame = +1
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGK 450
S DA+ G ++FFK +W +P + H + +P + +D+A
Sbjct: 913 SFDAI-STLRGEYLFFKDRYFWRRSHWNPEPEF-HLISAFWPSLPSY-LDAAYEVNSRDT 1083
Query: 451 TYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEY 507
+ FKG+ +W + GYP+ I G P + + A KE TYF+ +Y
Sbjct: 1084 VFIFKGNEFWAIRGN--EVQAGYPRGIHTL-GFPPTIRKIDAAVSDKEKKKTYFFAADKY 1254
Query: 508 WKFNNQILKVEPGYPRSILKDFMGCDGPTD 537
W+F+ +E G+PR I DF G + D
Sbjct: 1255 WRFDENSQSMEQGFPRLIADDFPGVEPKVD 1344
>gb|U54825.1|SSU54825 Sus scrofa matrix metalloproteinase mRNA, complete cds
Length = 3424
Score = 266 bits (681), Expect = 3e-69
Identities = 163/457 (35%), Positives = 230/457 (49%), Gaps = 5/457 (1%)
Frame = +2
Query: 62 VLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYA 121
V + +M + +Q F+G+ +TGK+DR T+D +K+PRCGVPD + R
Sbjct: 194 VAKGGNSMVKKIKELQAFFGLRVTGKLDRTTMDVIKRPRCGVPD---------VANYRLF 346
Query: 122 LTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRD 181
KW+ +TY I TP + E +A+ A W + PL+F V E
Sbjct: 347 PGEPKWKKNTLTYRISKYTPSMTPAEVDKAMEMALQAWSSAVPLSFVRVNAGE------- 505
Query: 182 VDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLF 241
DI I F +G HGDS PFDG G LAHA+ PG G+GGDTHFD+ E WT+G +G +LF
Sbjct: 506 ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMG---MNGFNLF 676
Query: 242 LVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXX 301
VA HE GHALGL HS DP+A+M P Y+Y F LP DD++GIQ +YG
Sbjct: 677 TVAAHEFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPKDDVKGIQALYGPRKTFTGKPT 856
Query: 302 XXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICD--GNFNTLAILRREMFV 359
+ S+ P+ICD +F+ + +L +E+
Sbjct: 857 VPHGPPHNPSL---------------------------PDICDSSSSFDAVTMLGKELLF 955
Query: 360 FKDQWFWRVRNNRVMDGY-PMQITYFWRGLPPSIDAVYENSD-GNFVFFKGNKYWVFKDT 417
F+D+ FWR R +M G P IT + L ++DA YE +D G FFKG YW+ +
Sbjct: 956 FRDRIFWR-RQVHLMSGIRPSTITSSFPQLMSNVDAAYEVADRGMAYFFKGPHYWITRGF 1132
Query: 418 TLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPI 477
+Q G P + G ID+A+ +D KT FF GD Y+ Y E + MD YPK
Sbjct: 1133QMQ-GPPRTIYDFGFPRYVQRIDAAVHLKDTQKTLFFVGDEYYSYDERKRKMDKDYPKNT 1309
Query: 478 -TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQ 513
+ G+ A + NG+ YF+ G + +K++ +
Sbjct: 1310EEEFSGVNGQIDAAV--ELNGYIYFFSGPKAYKYDTE 1414
>ref|NM_013903.1| Mus musculus matrix metalloproteinase 20 (enamelysin) (Mmp20), mRNA
Length = 3277
Score = 263 bits (673), Expect = 3e-68
Identities = 166/484 (34%), Positives = 237/484 (48%), Gaps = 10/484 (2%)
Frame = +2
Query: 40 YFNVEVWLQKYGYLPPTDPRMS--VLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMK 97
Y + +L KY Y P+ V R + M + +Q F+G+ +TGK+D+NT++ +K
Sbjct: 131 YHLAQAYLDKY-YTKKGGPQAGEMVARESNPMIRRIKELQIFFGLKVTGKLDQNTMNVIK 307
Query: 98 KPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFD 157
KPRCGVPD + R KW+ +TY I TP + E +AI+ A
Sbjct: 308 KPRCGVPD---------VANYRLFPGEPKWKKNILTYRISKYTPSMSPTEVDKAIQMALH 460
Query: 158 VWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 217
W PL F + E DI I F +G HGDS PFDG G LAHA+ PG G+G
Sbjct: 461 AWSTAVPLNFVRINSGE-------ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLG 619
Query: 218 GDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFK 277
GDTHFD+ E WT+G +G +LF VA HE GHALGL HS DP+A+M P Y+Y F
Sbjct: 620 GDTHFDNAEKWTMGT---NGFNLFTVAAHEFGHALGLGHSTDPSALMYPTYKYQNPYRFH 790
Query: 278 LPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXG 337
LP DD++GIQ +YG S+
Sbjct: 791 LPKDDVKGIQALYGPRKIFPGKPTMPHIPPHKPSI------------------------- 895
Query: 338 AKPNICD--GNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 395
P++CD +F+ + +L +E+ FKD+ FWR + + P IT + L ++DA
Sbjct: 896 --PDLCDSSSSFDAVTMLGKELLFFKDRIFWRRQVHLPTGIRPSTITSSFPQLMSNVDAA 1069
Query: 396 YENSD-GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFF 454
YE ++ G FFKG YWV + +Q G P + G ID+A++ ++ KT FF
Sbjct: 1070YEVAERGIAFFFKGPHYWVTRGFHMQ-GPPRTIYDFGFPRHVQRIDAAVYLKEPQKTLFF 1246
Query: 455 KGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKE-----NGFTYFYKGKEYWK 509
G+ Y+ Y E K M+ YP K E G H + NG+ YF+ G++ +K
Sbjct: 1247VGEEYYSYDERKKKMEKDYP------KNTEEEFSGVSGHIDAAVELNGYIYFFSGRKTFK 1408
Query: 510 FNNQ 513
++ +
Sbjct: 1409YDTE 1420
>gb|AF155933.1|AF155933 Mus musculus matrix metalloproteinase-20 (Mmp20) mRNA, complete cds
Length = 3295
Score = 263 bits (673), Expect = 3e-68
Identities = 166/484 (34%), Positives = 237/484 (48%), Gaps = 10/484 (2%)
Frame = +2
Query: 40 YFNVEVWLQKYGYLPPTDPRMS--VLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMK 97
Y + +L KY Y P+ V R + M + +Q F+G+ +TGK+D+NT++ +K
Sbjct: 131 YHLAQAYLDKY-YTKKGGPQAGEMVARESNPMIRRIKELQIFFGLKVTGKLDQNTMNVIK 307
Query: 98 KPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFD 157
KPRCGVPD + R KW+ +TY I TP + E +AI+ A
Sbjct: 308 KPRCGVPD---------VANYRLFPGEPKWKKNILTYRISKYTPSMSPTEVDKAIQMALH 460
Query: 158 VWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 217
W PL F + E DI I F +G HGDS PFDG G LAHA+ PG G+G
Sbjct: 461 AWSTAVPLNFVRINSGE-------ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLG 619
Query: 218 GDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFK 277
GDTHFD+ E WT+G +G +LF VA HE GHALGL HS DP+A+M P Y+Y F
Sbjct: 620 GDTHFDNAEKWTMGT---NGFNLFTVAAHEFGHALGLGHSTDPSALMYPTYKYQNPYRFH 790
Query: 278 LPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXG 337
LP DD++GIQ +YG S+
Sbjct: 791 LPKDDVKGIQALYGPRKIFPGKPTMPHIPPHKPSI------------------------- 895
Query: 338 AKPNICD--GNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAV 395
P++CD +F+ + +L +E+ FKD+ FWR + + P IT + L ++DA
Sbjct: 896 --PDLCDSSSSFDAVTMLGKELLFFKDRIFWRRQVHLPTGIRPSTITSSFPQLMSNVDAA 1069
Query: 396 YENSD-GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFF 454
YE ++ G FFKG YWV + +Q G P + G ID+A++ ++ KT FF
Sbjct: 1070YEVAERGIAFFFKGPHYWVTRGFHMQ-GPPRTIYDFGFPRHVQRIDAAVYLKEPQKTLFF 1246
Query: 455 KGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKE-----NGFTYFYKGKEYWK 509
G+ Y+ Y E K M+ YP K E G H + NG+ YF+ G++ +K
Sbjct: 1247VGEEYYSYDERKKKMEKDYP------KNTEEEFSGVSGHIDAAVELNGYIYFFSGRKTFK 1408
Query: 510 FNNQ 513
++ +
Sbjct: 1409YDTE 1420
>emb|Y12779.1|HSENAMELY H.sapiens mRNA for enamelysin
Length = 1674
Score = 263 bits (671), Expect = 5e-68
Identities = 156/456 (34%), Positives = 229/456 (50%), Gaps = 4/456 (0%)
Frame = +2
Query: 62 VLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYA 121
V R + +M + +Q F+G+ +TGK+D+ T++ +KKPRCGVPD + R
Sbjct: 194 VARGSNSMIRKIKELQAFFGLQVTGKLDQTTMNVIKKPRCGVPD---------VANYRLF 346
Query: 122 LTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRD 181
KW+ +TY I TP + E +A+ A W + PL+F + E
Sbjct: 347 PGEPKWKKNTLTYRISKYTPSMSSVEVDKAVEMALQAWSSAVPLSFVRINSGE------- 505
Query: 182 VDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLF 241
DI I F +G HGDS PFDG G LAHA+ PG G+GGDTHFD+ E WT+G +G +LF
Sbjct: 506 ADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNPEKWTMGT---NGFNLF 676
Query: 242 LVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXX 301
VA HE GHALGL HS DP+A+M P Y+Y F LP DD++GIQ +YG
Sbjct: 677 TVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYGFHLPKDDVKGIQALYGPRKVFLGKPT 856
Query: 302 XXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICD--GNFNTLAILRREMFV 359
S+ P++CD +F+ + +L +E+ +
Sbjct: 857 LPHAPHHKPSI---------------------------PDLCDSSSSFDAVTMLGKELLL 955
Query: 360 FKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSD-GNFVFFKGNKYWVFKDTT 418
FKD+ FWR + + P IT + L ++DA YE ++ G FFKG YW+ +
Sbjct: 956 FKDRIFWRRQVHLRTGIRPSTITSSFPQLMSNVDAAYEVAERGTAYFFKGPHYWITRGFQ 1135
Query: 419 LQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPI- 477
+Q G P + G ID+A++ + KT FF GD Y+ Y E + M+ YPK
Sbjct: 1136MQ-GPPRTIYDFGFPRHVQQIDAAVYLREPQKTLFFVGDEYYSYDERKRKMEKDYPKNTE 1312
Query: 478 TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQ 513
+ G+ A + NG+ YF+ G + +K++ +
Sbjct: 1313EEFSGVNGQIDAAV--ELNGYIYFFSGPKTYKYDTE 1414
>ref|NM_004771.2| Homo sapiens matrix metalloproteinase 20 (enamelysin) (MMP20), mRNA
Length = 1958
Score = 263 bits (671), Expect = 5e-68
Identities = 156/456 (34%), Positives = 229/456 (50%), Gaps = 4/456 (0%)
Frame = +2
Query: 62 VLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYA 121
V R + +M + +Q F+G+ +TGK+D+ T++ +KKPRCGVPD + R
Sbjct: 194 VARGSNSMIRKIKELQAFFGLQVTGKLDQTTMNVIKKPRCGVPD---------VANYRLF 346
Query: 122 LTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRD 181
KW+ +TY I TP + E +A+ A W + PL+F + E
Sbjct: 347 PGEPKWKKNTLTYRISKYTPSMSSVEVDKAVEMALQAWSSAVPLSFVRINSGE------- 505
Query: 182 VDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLF 241
DI I F +G HGDS PFDG G LAHA+ PG G+GGDTHFD+ E WT+G +G +LF
Sbjct: 506 ADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNPEKWTMGT---NGFNLF 676
Query: 242 LVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXX 301
VA HE GHALGL HS DP+A+M P Y+Y F LP DD++GIQ +YG
Sbjct: 677 TVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYGFHLPKDDVKGIQALYGPRKVFLGKPT 856
Query: 302 XXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICD--GNFNTLAILRREMFV 359
S+ P++CD +F+ + +L +E+ +
Sbjct: 857 LPHAPHHKPSI---------------------------PDLCDSSSSFDAVTMLGKELLL 955
Query: 360 FKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSD-GNFVFFKGNKYWVFKDTT 418
FKD+ FWR + + P IT + L ++DA YE ++ G FFKG YW+ +
Sbjct: 956 FKDRIFWRRQVHLRTGIRPSTITSSFPQLMSNVDAAYEVAERGTAYFFKGPHYWITRGFQ 1135
Query: 419 LQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPI- 477
+Q G P + G ID+A++ + KT FF GD Y+ Y E + M+ YPK
Sbjct: 1136MQ-GPPRTIYDFGFPRHVQQIDAAVYLREPQKTLFFVGDEYYSYDERKRKMEKDYPKNTE 1312
Query: 478 TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQ 513
+ G+ A + NG+ YF+ G + +K++ +
Sbjct: 1313EEFSGVNGQIDAAV--ELNGYIYFFSGPKTYKYDTE 1414
>dbj|AB043536.1|AB043536 Oncorhynchus mykiss mmp mRNA for matrix metalloproteinase, complete
cds
Length = 2104
Score = 259 bits (662), Expect = 5e-67
Identities = 162/449 (36%), Positives = 217/449 (48%), Gaps = 11/449 (2%)
Frame = +2
Query: 73 LAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHI 132
++ MQ+F+G+ +TG +D T+ MKKPRCG+PD G + KW +
Sbjct: 581 VSEMQRFFGLKVTGTLDAETVKMMKKPRCGLPDVQLG--------RFTTFDNLKWPTNQL 736
Query: 133 TYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGF 192
TY I+N TP + E +I RA VW V+PL F + + DI I F +
Sbjct: 737 TYRIENYTPDMSVAEVDNSIERALQVWAKVSPLRFTRIY-------RGTADIMISFGNRN 895
Query: 193 HGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHAL 252
HGD PFDG G LAHA+ PG IGGD HFD DE +T + G +LFLVA HE GH+L
Sbjct: 896 HGDFYPFDGPEGTLAHAFSPGADIGGDAHFDDDEYFTFSSTR--GYNLFLVAAHEFGHSL 1069
Query: 253 GLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSV 312
GL HSNDP A+M P Y Y E F LP DD+ GIQ IYG
Sbjct: 1070GLSHSNDPGALMFPVYSYTEPSTFSLPRDDVTGIQYIYGPNPDVNPNPDKPDPTPV---- 1237
Query: 313 XXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGN--FNTLAILRREMFVFKDQWFWRVRN 370
+ P+ CD + + LR E FK ++FWR+
Sbjct: 1238-------------------------STPDACDPTLVLDAVTTLRGEKMFFKGRFFWRI-- 1336
Query: 371 NRVMDGYPMQ-------ITYFWRGLPPSIDAVYENSDGNFVF-FKGNKYWVFKDTTLQPG 422
YP I FW LP +I+A YE+ + VF FK ++ W + PG
Sbjct: 1337------YPQSSKPHQNLIKTFWPELPDNINAAYESQLSDRVFLFKDHQVWALYGYDIVPG 1498
Query: 423 YPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPI-TIWK 481
YP +L +LG +D+A++ E KT FF GD Y+ Y EEMK+MD G+PK + +
Sbjct: 1499YPRNLKSLGLPRTVKKVDAALYDEHSRKTLFFVGDNYYSYDEEMKSMDRGFPKRVDEQFP 1678
Query: 482 GIPESPQGAFVHKENGFTYFYKGKEYWKF 510
G+ AF + GFTY Y G +++
Sbjct: 1679GMTSKVTAAF--QVRGFTYLYSGPYVFEY 1759
>gb|AF281673.1|AF281673 Tupaia belangeri matrix metalloproteinase-27 mRNA, complete cds
Length = 1667
Score = 258 bits (660), Expect = 9e-67
Identities = 170/503 (33%), Positives = 239/503 (46%), Gaps = 12/503 (2%)
Frame = +1
Query: 21 FFLQTLLWILCATVCGTEQYFNVE-------VWLQKYGYLPPTDPRMSVLRSAETMQSAL 73
F L LL++ ++ +Q E +L ++ L + ++ + +
Sbjct: 103 FLLLFLLFVTFSSALPADQKMENEENMQLAQAYLNQFYSLEIEGSHLVQSKNGSLLDGKI 282
Query: 74 AAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIT 133
MQ F+G+ +TG +D NT++ MK PRCGVPD + + Y L G W+ ++T
Sbjct: 283 REMQAFFGLTVTGTLDSNTLEIMKTPRCGVPD---------VGQYGYTLPG--WRKYNLT 429
Query: 134 YSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFH 193
Y I N TP + + AI++A +VW VTPLTF ++ K DI I F + H
Sbjct: 430 YRIMNYTPDMARADVDEAIQKALEVWSKVTPLTFTKI-------FKGIADIMIAFRTRVH 588
Query: 194 GDSSP-FDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHAL 252
G FDG G L HA+ PG G+GGDTHFD DE WT G LFLVA HE GHAL
Sbjct: 589 GRCPRYFDGPLGVLGHAFPPGLGLGGDTHFDEDENWTKDTA---GFSLFLVAAHEFGHAL 759
Query: 253 GLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSV 312
GL HSND TA+M P Y ++ + L DD+ GIQ IYG
Sbjct: 760 GLSHSNDQTALMFPNYVSLDPSKYPLSQDDIDGIQSIYG--------------------- 876
Query: 313 XXXXXXXXXXXXXXXXXXXXXXXXGAK-PNICDGN--FNTLAILRREMFVFKDQWFWRVR 369
G K P+ CD + F+ + +RRE+ FK + WR+
Sbjct: 877 --------------GLPTTPSKPKGPKIPHACDPDLTFDAITNIRREVMFFKGRHLWRIY 1014
Query: 370 NNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLIT 429
++ + D I FW LP + A YEN + FK +W+ + P YP +
Sbjct: 1015HD-ITDVEFELIASFWPSLPADLQAAYENPRDKILVFKDENFWMIGAYNVLPRYPRSIHI 1191
Query: 430 LGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQ 488
LG ID+A+ +D KTYFF G WRY E +TMD GYP+ I + GI
Sbjct: 1192LGFPRYVKKIDAAVCDQDTRKTYFFVGIWCWRYDEMTRTMDRGYPQRIVRHFPGIGLRVD 1371
Query: 489 GAFVHKENGFTYFYKGKEYWKFN 511
AF HK GF YF++G + ++++
Sbjct: 1372AAFQHK--GFFYFFRGSKQFEYD 1434
>ref|NM_032006.1| Mus musculus collagenase-like A (Mcola-pending), mRNA
Length = 1525
Score = 258 bits (659), Expect = 1e-66
Identities = 169/461 (36%), Positives = 235/461 (50%), Gaps = 9/461 (1%)
Frame = +2
Query: 67 ETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALT--G 124
E M L MQQ +G+ +TG D T+ MKKPRCGVPD YA+T
Sbjct: 173 EMMAEKLRQMQQLFGLKVTGNSDPETLRAMKKPRCGVPDVAP-----------YAITHNN 319
Query: 125 QKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDI 184
+W H+TYSI N TP + AI RAF VW +VTPLTF+ V + + DI
Sbjct: 320 PRWTKTHLTYSILNYTPYLPKAVVEDAIARAFRVWSDVTPLTFQRV-------FEEEGDI 478
Query: 185 TIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVA 244
+ F G HGD++PFDG LAH + PGPG+GGD H+D DE WT + N +LF V
Sbjct: 479 VLSFHRGDHGDNNPFDGPNYKLAHTFQPGPGLGGDVHYDLDETWTNSSENF---NLFYVT 649
Query: 245 VHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXX 304
HELGH+LGL HS+D A+M P Y + T++F L DD+ IQ +YG
Sbjct: 650 AHELGHSLGLTHSSDIGALMFPSYTWY-TEDFVLNQDDINRIQDLYGPSPNPIQPTGATT 826
Query: 305 XXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGN--FNTLAILRREMFVFKD 362
P+ C+G+ F+ + R E+F FK
Sbjct: 827 -----------------------------------PHPCNGDLTFDAITTFRGEVFFFKG 901
Query: 363 QWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAVYENSDGNFV-FFKGNKYWVFKDTTLQ 420
+++ RV NR M + I W LP +DA YE S + V +FKG+K W ++ ++
Sbjct: 902 RFYIRV--NRFMPEPELNLIGILWPNLPVKLDAAYEASMIDQVRYFKGSKVWAVQEQSVL 1075
Query: 421 PGYPHDLITLGNGIPPH--GIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPK-PI 477
G+P D+ + G P + ID+A+ E+ GKTYFF YWRY E ++MDPGYP+
Sbjct: 1076RGFPRDIHSF-FGFPSNVTHIDAAVCEEETGKTYFFVDHMYWRYDENTQSMDPGYPRLTA 1252
Query: 478 TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVE 518
+ GI + F EN F +F++ ++ +FN QI +V+
Sbjct: 1253EDFPGIDDKVDDVFQKGEN-FYFFHQSVQH-RFNLQIRRVD 1369
Score = 63.2 bits (152), Expect = 7e-08
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 11/178 (6%)
Frame = +2
Query: 371 NRVMDGY-----PMQITYFWRGLPPSIDAVYE---NSDGNFVFFKGNKYWVFKDTTLQPG 422
NR+ D Y P+Q T P + D ++ G FFKG Y + P
Sbjct: 764 NRIQDLYGPSPNPIQPTGATTPHPCNGDLTFDAITTFRGEVFFFKGRFY--IRVNRFMPE 937
Query: 423 YPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKG 482
+LI + P +D+A + + +FKG + W E+ ++ G+P+ I + G
Sbjct: 938 PELNLIGILWPNLPVKLDAAYEASMIDQVRYFKGSKVWAVQEQ--SVLRGFPRDIHSFFG 1111
Query: 483 IPESP---QGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTD 537
P + A +E G TYF+ YW+++ ++PGYPR +DF G D D
Sbjct: 1112FPSNVTHIDAAVCEEETGKTYFFVDHMYWRYDENTQSMDPGYPRLTAEDFPGIDDKVD 1285
>emb|AJ278462.1|MMU278462 Mus musculus mRNA for putative matrix metalloproteinase (McolA
gene)
Length = 1525
Score = 258 bits (659), Expect = 1e-66
Identities = 169/461 (36%), Positives = 235/461 (50%), Gaps = 9/461 (1%)
Frame = +2
Query: 67 ETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALT--G 124
E M L MQQ +G+ +TG D T+ MKKPRCGVPD YA+T
Sbjct: 173 EMMAEKLRQMQQLFGLKVTGNSDPETLRAMKKPRCGVPDVAP-----------YAITHNN 319
Query: 125 QKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDI 184
+W H+TYSI N TP + AI RAF VW +VTPLTF+ V + + DI
Sbjct: 320 PRWTKTHLTYSILNYTPYLPKAVVEDAIARAFRVWSDVTPLTFQRV-------FEEEGDI 478
Query: 185 TIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVA 244
+ F G HGD++PFDG LAH + PGPG+GGD H+D DE WT + N +LF V
Sbjct: 479 VLSFHRGDHGDNNPFDGPNYKLAHTFQPGPGLGGDVHYDLDETWTNSSENF---NLFYVT 649
Query: 245 VHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXX 304
HELGH+LGL HS+D A+M P Y + T++F L DD+ IQ +YG
Sbjct: 650 AHELGHSLGLTHSSDIGALMFPSYTWY-TEDFVLNQDDINRIQDLYGPSPNPIQPTGATT 826
Query: 305 XXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGN--FNTLAILRREMFVFKD 362
P+ C+G+ F+ + R E+F FK
Sbjct: 827 -----------------------------------PHPCNGDLTFDAITTFRGEVFFFKG 901
Query: 363 QWFWRVRNNRVMDGYPMQ-ITYFWRGLPPSIDAVYENSDGNFV-FFKGNKYWVFKDTTLQ 420
+++ RV NR M + I W LP +DA YE S + V +FKG+K W ++ ++
Sbjct: 902 RFYIRV--NRFMPEPELNLIGILWPNLPVKLDAAYEASMIDQVRYFKGSKVWAVQEQSVL 1075
Query: 421 PGYPHDLITLGNGIPPH--GIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPK-PI 477
G+P D+ + G P + ID+A+ E+ GKTYFF YWRY E ++MDPGYP+
Sbjct: 1076RGFPRDIHSF-FGFPSNVTHIDAAVCEEETGKTYFFVDHMYWRYDENTQSMDPGYPRLTA 1252
Query: 478 TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVE 518
+ GI + F EN F +F++ ++ +FN QI +V+
Sbjct: 1253EDFPGIDDKVDDVFQKGEN-FYFFHQSVQH-RFNLQIRRVD 1369
Score = 63.2 bits (152), Expect = 7e-08
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 11/178 (6%)
Frame = +2
Query: 371 NRVMDGY-----PMQITYFWRGLPPSIDAVYE---NSDGNFVFFKGNKYWVFKDTTLQPG 422
NR+ D Y P+Q T P + D ++ G FFKG Y + P
Sbjct: 764 NRIQDLYGPSPNPIQPTGATTPHPCNGDLTFDAITTFRGEVFFFKGRFY--IRVNRFMPE 937
Query: 423 YPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKG 482
+LI + P +D+A + + +FKG + W E+ ++ G+P+ I + G
Sbjct: 938 PELNLIGILWPNLPVKLDAAYEASMIDQVRYFKGSKVWAVQEQ--SVLRGFPRDIHSFFG 1111
Query: 483 IPESP---QGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTD 537
P + A +E G TYF+ YW+++ ++PGYPR +DF G D D
Sbjct: 1112FPSNVTHIDAAVCEEETGKTYFFVDHMYWRYDENTQSMDPGYPRLTAEDFPGIDDKVD 1285
>gb|BC019135.1|BC019135 Mus musculus, Similar to matrix metalloproteinase 12, clone
MGC:29351 IMAGE:5037674, mRNA, complete cds
Length = 1822
Score = 258 bits (658), Expect = 2e-66
Identities = 149/436 (34%), Positives = 216/436 (49%), Gaps = 7/436 (1%)
Frame = +3
Query: 50 YGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRG 109
Y Y P + ++ L MQQF+G+ TG++D +T+ M PRCGVPD
Sbjct: 147 YDYGKDRIPMTKTKTNRNFLEEKLQEMQQFFGLEATGQLDNSTLAIMHIPRCGVPD---- 314
Query: 110 SSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEE 169
++ R +W +++TY I N TP + + ++AF VW +VTPL F +
Sbjct: 315 -----VQHLRAVPQRSRWMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRK 479
Query: 170 VPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWT 229
+ K + DI I+FA G HGD + FDG+GG LAHA++PGPGI GD HFD E WT
Sbjct: 480 LH-------KDEADIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWT 638
Query: 230 LGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKI 289
+ G +LFLVAVHELGH+LGL+HSN+P +IM P Y+Y+ + F+L DD++ IQ +
Sbjct: 639 ---KSFQGTNLFLVAVHELGHSLGLQHSNNPKSIMDPTYRYLNPNTFRLSADDIRNIQSL 809
Query: 290 YGXXXXXXXXXXXXX--XXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNF 347
YG H+S+ +F
Sbjct: 810 YGAPVKTPSLTKPSSPPSTFCHQSL---------------------------------SF 890
Query: 348 NTLAILRREMFVFKDQWFWRVRNNRVMDGYP----MQITYFWRGLPPSIDAVYENSDGNF 403
+ + + ++F FKD +FW + G P + I+ W +P I A YE N
Sbjct: 891 DAVTTVGEKIFFFKDWFFW-----WKLPGSPATNIISISSIWPSIPSGIQAAYEIESRNQ 1055
Query: 404 VF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRY 462
+F FK KYW+ + +P YP + +LG +D+A++ K YFF +YWRY
Sbjct: 1056LFLFKDEKYWLINNLVPEPHYPRSIYSLGFSASVKKVDAAVFDPLRQKVYFFVDKQYWRY 1235
Query: 463 SEEMKTMDPGYPKPIT 478
+ MDP YPK I+
Sbjct: 1236DVRQELMDPAYPKLIS 1283
Score = 49.7 bits (117), Expect = 8e-04
Identities = 41/172 (23%), Positives = 77/172 (43%), Gaps = 8/172 (4%)
Frame = +3
Query: 368 VRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ---PGYP 424
+RN + + G P++ + P +++ + V G K + FKD PG P
Sbjct: 789 IRNIQSLYGAPVKTPSLTKPSSPPSTFCHQSLSFDAVTTVGEKIFFFKDWFFWWKLPGSP 968
Query: 425 H-DLITLGNGIP--PHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITI-- 479
++I++ + P P GI +A E + + FK ++YW + + +P YP+ I
Sbjct: 969 ATNIISISSIWPSIPSGIQAAYEIESRNQLFLFKDEKYWLINNLVP--EPHYPRSIYSLG 1142
Query: 480 WKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMG 531
+ + A YF+ K+YW+++ + ++P YP+ I F G
Sbjct: 1143FSASVKKVDAAVFDPLRQKVYFFVDKQYWRYDVRQELMDPAYPKLISTHFPG 1298
>gb|AF070478.1|AF070478 Gallus gallus matrix metalloproteinase-13 (MMP-13) mRNA, partial
cds
Length = 1487
Score = 256 bits (654), Expect = 5e-66
Identities = 160/426 (37%), Positives = 216/426 (50%), Gaps = 7/426 (1%)
Frame = +1
Query: 99 PRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDV 158
PRCGVPD G KF R+ KW + ++TY I + T + E RA +RAF V
Sbjct: 1 PRCGVPDV--GEYKFFPRKL-------KWSNTNLTYRIMSYTSDLRRAEVERAFKRAFKV 153
Query: 159 WQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGG 218
W +VTPL F + + +G DI I F + HGD PFDG G LAHA+ PGP GG
Sbjct: 154 WSDVTPLNF-----TRIRSGT--ADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPDYGG 312
Query: 219 DTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKL 278
D HFD DE W+ + G +LFLVA HE GH+LGLEHS DP A+M P Y Y F L
Sbjct: 313 DAHFDDDETWS---DDSRGYNLFLVAAHEFGHSLGLEHSRDPGALMFPIYTYTGKSGFVL 483
Query: 279 PNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGA 338
P+DD+QGIQ++YG
Sbjct: 484 PDDDVQGIQELYGAGDRDPNPKHPKT---------------------------------- 561
Query: 339 KPNIC--DGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVY 396
P C D + + + LR EM VFKD++FWR+ + ++++ + I FW LP IDA Y
Sbjct: 562 -PEKCAADLSIDAITKLRGEMLVFKDRFFWRL-HPQMVEAELVLIKSFWPELPNKIDAAY 735
Query: 397 ENSDGNFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFK 455
EN + VF FKG K W + G+P + +G ID+ + +D GKT FF
Sbjct: 736 ENPIKDLVFMFKGKKVWAMNGYDIVEGFPKKIYEMGFPKEMKKIDAVVHIDDTGKTLFFT 915
Query: 456 GDRYWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGK---EYWKFN 511
G++YW Y EE + MD GYPK I + GI + V+ NG+ YF+ G EY ++
Sbjct: 916 GNKYWSYDEETEVMDTGYPKFIEDEFAGIGDRVDA--VYHRNGYLYFFNGPLQFEYSIWS 1089
Query: 512 NQILKV 517
+I+++
Sbjct: 1090KRIVRI 1107
Score = 45.8 bits (107), Expect = 0.012
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 5/152 (3%)
Frame = +1
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIP--PHGIDSAIWWEDV 448
SIDA+ + G + FK +W ++ +L+ + + P P+ ID+A
Sbjct: 586 SIDAITKLR-GEMLVFKDRFFWRLHPQMVEA----ELVLIKSFWPELPNKIDAAYENPIK 750
Query: 449 GKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQ--GAFVH-KENGFTYFYKGK 505
+ FKG + W + + G+PK I G P+ + A VH + G T F+ G
Sbjct: 751 DLVFMFKGKKVWAMNGY--DIVEGFPKKI-YEMGFPKEMKKIDAVVHIDDTGKTLFFTGN 921
Query: 506 EYWKFNNQILKVEPGYPRSILKDFMGCDGPTD 537
+YW ++ + ++ GYP+ I +F G D
Sbjct: 922 KYWSYDEETEVMDTGYPKFIEDEFAGIGDRVD 1017
>dbj|AB028240.1|AB028240 Salmo salar mRNA for matrix metalloproteinase 13, complete cds
Length = 1714
Score = 251 bits (642), Expect = 1e-64
Identities = 163/478 (34%), Positives = 236/478 (49%), Gaps = 4/478 (0%)
Frame = +1
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L++Y Y P + S + + MQ+F+ +N+TGK+D +T++ M+ RCGV
Sbjct: 109 EKYLRRY-YGMPAGLQGKEKTSDVMYKKKIQEMQEFFKLNVTGKLDDDTLELMEMARCGV 285
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVT 163
PD + + KW+ +T+ I N TP + + RA+R +VW +VT
Sbjct: 286 PD---------VAEYNHFPNDLKWKTTEVTFRILNYTPDLRKADVDRAVRNGLNVWSSVT 438
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PL F+++ + + DI I F + HGD +PFDG G LAHAY PG GIGGDTHFD
Sbjct: 439 PLKFKKLY-------EGNADIMISFGAREHGDFNPFDGPDGLLAHAYPPGNGIGGDTHFD 597
Query: 224 SDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDL 283
DE WT H+ N LFLVA HE GHALG+ HS+DP ++M P Y Y + + L DD+
Sbjct: 598 EDETWT--KDFHEFN-LFLVAAHEFGHALGMAHSSDPGSLMYPVYSYGK--GYPLSEDDI 762
Query: 284 QGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNIC 343
+GIQ +YG HR + P+ C
Sbjct: 763 KGIQSLYG-------------ENPNHRRIKPKPDA---------------------PSKC 840
Query: 344 DG--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDG 401
D +F+ + LR E +FKD+++WR+ ++++ + I W +P +DA YEN +
Sbjct: 841 DPELSFDAVTELRGETIIFKDRFYWRL-HSQIPEPEQTLIKSTWPEIPNKVDAAYENPEK 1017
Query: 402 NFV-FFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
+ V F G K W L GYP + LG ID+A+ D GKT F + YW
Sbjct: 1018DVVIIFSGIKMWALNGYNLVDGYPKYIHKLGLPKTVRKIDAAVNIRDTGKTLLFVEEEYW 1197
Query: 461 RYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
Y E TMD GYP+ I + GI + A H G+ YFY ++++ KV
Sbjct: 1198SYDERTGTMDSGYPRSIEEDFPGIGDEVDAAAYH--FGYLYFYHEHIQFEYSYNSRKV 1365
Score = 47.4 bits (111), Expect = 0.004
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Frame = +1
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGK 450
S DAV E G + FK YW +P LI P+ +D+A +
Sbjct: 853 SFDAVTELR-GETIIFKDRFYWRLHSQIPEP--EQTLIKSTWPEIPNKVDAAYENPEKDV 1023
Query: 451 TYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEY 507
F G + W + + GYPK I G+P++ + A ++ G T + +EY
Sbjct: 1024VIIFSGIKMWALNGY--NLVDGYPKYIHKL-GLPKTVRKIDAAVNIRDTGKTLLFVEEEY 1194
Query: 508 WKFNNQILKVEPGYPRSILKDFMGCDGPTD 537
W ++ + ++ GYPRSI +DF G D
Sbjct: 1195WSYDERTGTMDSGYPRSIEEDFPGIGDEVD 1284
>ref|NM_008605.1| Mus musculus matrix metalloproteinase 12 (Mmp12), mRNA
Length = 1790
Score = 251 bits (642), Expect = 1e-64
Identities = 147/436 (33%), Positives = 212/436 (47%), Gaps = 7/436 (1%)
Frame = +1
Query: 50 YGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRG 109
Y Y P + ++ L MQQF+G+ TG++D +T+ M PRCGVPD
Sbjct: 100 YDYGKDRIPMTKTKTNRNFLKEKLQEMQQFFGLEATGQLDNSTLAIMHIPRCGVPD---- 267
Query: 110 SSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEE 169
++ R +W +++TY I N TP + + ++AF VW +VTPL F +
Sbjct: 268 -----VQHLRAVPQRSRWMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRK 432
Query: 170 VPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWT 229
+ K + DI I+FA G HGD + FDG+GG LAH ++PGPGI GD HFD E WT
Sbjct: 433 LH-------KDEADIMILFAFGAHGDFNYFDGKGGTLAHVFYPGPGIQGDAHFDEAETWT 591
Query: 230 LGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKI 289
+ G +LFLVAVHELGH+LGL+HSN+P +IM P Y+Y+ F+L DD++ IQ +
Sbjct: 592 ---KSFQGTNLFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSL 762
Query: 290 YGXXXX--XXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNF 347
YG H+S+ +F
Sbjct: 763 YGAPVKPPSLTKPSSPPSTFCHQSL---------------------------------SF 843
Query: 348 NTLAILRREMFVFKDQWFWRVRNNRVMDGYP----MQITYFWRGLPPSIDAVYENSDGNF 403
+ + + ++ FKD +FW + G P I+ W +P +I A YE N
Sbjct: 844 DAVTTVGEKILFFKDWFFW-----WKLPGSPATNITSISSIWPSIPSAIQAAYEIESRNQ 1008
Query: 404 VF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRY 462
+F FK KYW+ + +P YP + +LG +D+A++ K YFF YWRY
Sbjct: 1009LFLFKDEKYWLINNLVPEPHYPRSIYSLGFSASVKKVDAAVFDPLRQKVYFFVDKHYWRY 1188
Query: 463 SEEMKTMDPGYPKPIT 478
+ MDP YPK I+
Sbjct: 1189DVRQELMDPAYPKLIS 1236
Score = 45.1 bits (105), Expect = 0.021
Identities = 41/172 (23%), Positives = 71/172 (40%), Gaps = 8/172 (4%)
Frame = +1
Query: 368 VRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ---PGYP 424
+RN + + G P++ + P +++ + V G K FKD PG P
Sbjct: 742 IRNIQSLYGAPVKPPSLTKPSSPPSTFCHQSLSFDAVTTVGEKILFFKDWFFWWKLPGSP 921
Query: 425 HDLITLGNGI---PPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITI-- 479
IT + I P I +A E + + FK ++YW + + +P YP+ I
Sbjct: 922 ATNITSISSIWPSIPSAIQAAYEIESRNQLFLFKDEKYWLINNLVP--EPHYPRSIYSLG 1095
Query: 480 WKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMG 531
+ + A YF+ K YW+++ + ++P YP+ I F G
Sbjct: 1096FSASVKKVDAAVFDPLRQKVYFFVDKHYWRYDVRQELMDPAYPKLISTHFPG 1251
>gb|M82831.1|MUSMETELAS Mus musculus macrophage metalloelastase mRNA, complete cds
Length = 1790
Score = 251 bits (642), Expect = 1e-64
Identities = 147/436 (33%), Positives = 212/436 (47%), Gaps = 7/436 (1%)
Frame = +1
Query: 50 YGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRG 109
Y Y P + ++ L MQQF+G+ TG++D +T+ M PRCGVPD
Sbjct: 100 YDYGKDRIPMTKTKTNRNFLKEKLQEMQQFFGLEATGQLDNSTLAIMHIPRCGVPD---- 267
Query: 110 SSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEE 169
++ R +W +++TY I N TP + + ++AF VW +VTPL F +
Sbjct: 268 -----VQHLRAVPQRSRWMKRYLTYRIYNYTPDMKREDVDYIFQKAFQVWSDVTPLRFRK 432
Query: 170 VPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWT 229
+ K + DI I+FA G HGD + FDG+GG LAH ++PGPGI GD HFD E WT
Sbjct: 433 LH-------KDEADIMILFAFGAHGDFNYFDGKGGTLAHVFYPGPGIQGDAHFDEAETWT 591
Query: 230 LGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKI 289
+ G +LFLVAVHELGH+LGL+HSN+P +IM P Y+Y+ F+L DD++ IQ +
Sbjct: 592 ---KSFQGTNLFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSL 762
Query: 290 YGXXXX--XXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNF 347
YG H+S+ +F
Sbjct: 763 YGAPVKPPSLTKPSSPPSTFCHQSL---------------------------------SF 843
Query: 348 NTLAILRREMFVFKDQWFWRVRNNRVMDGYP----MQITYFWRGLPPSIDAVYENSDGNF 403
+ + + ++ FKD +FW + G P I+ W +P +I A YE N
Sbjct: 844 DAVTTVGEKILFFKDWFFW-----WKLPGSPATNITSISSIWPSIPSAIQAAYEIESRNQ 1008
Query: 404 VF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRY 462
+F FK KYW+ + +P YP + +LG +D+A++ K YFF YWRY
Sbjct: 1009LFLFKDEKYWLINNLVPEPHYPRSIYSLGFSASVKKVDAAVFDPLRQKVYFFVDKHYWRY 1188
Query: 463 SEEMKTMDPGYPKPIT 478
+ MDP YPK I+
Sbjct: 1189DVRQELMDPAYPKLIS 1236
Score = 45.1 bits (105), Expect = 0.021
Identities = 41/172 (23%), Positives = 71/172 (40%), Gaps = 8/172 (4%)
Frame = +1
Query: 368 VRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ---PGYP 424
+RN + + G P++ + P +++ + V G K FKD PG P
Sbjct: 742 IRNIQSLYGAPVKPPSLTKPSSPPSTFCHQSLSFDAVTTVGEKILFFKDWFFWWKLPGSP 921
Query: 425 HDLITLGNGI---PPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITI-- 479
IT + I P I +A E + + FK ++YW + + +P YP+ I
Sbjct: 922 ATNITSISSIWPSIPSAIQAAYEIESRNQLFLFKDEKYWLINNLVP--EPHYPRSIYSLG 1095
Query: 480 WKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMG 531
+ + A YF+ K YW+++ + ++P YP+ I F G
Sbjct: 1096FSASVKKVDAAVFDPLRQKVYFFVDKHYWRYDVRQELMDPAYPKLISTHFPG 1251
>ref|NM_053963.1| Rattus norvegicus matrix metalloproteinase 12 (Mmp12), mRNA
Length = 1632
Score = 248 bits (634), Expect = 9e-64
Identities = 146/425 (34%), Positives = 211/425 (49%), Gaps = 4/425 (0%)
Frame = +3
Query: 58 PRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRR 117
P + ++ L MQQF+G+ +TG++D +T+ M RCGVPD ++
Sbjct: 177 PMTKTKTNRNLLEEKLQEMQQFFGLEVTGQLDTSTLKIMHTSRCGVPD---------VQH 329
Query: 118 KRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELEN 177
R +W +++TY I N TP + + ++AF VW +VTPL F ++
Sbjct: 330 LRAVPQRSRWMKRYLTYRIYNYTPDMKRADVDYIFQKAFQVWSDVTPLRFRKIH------ 491
Query: 178 GKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDG 237
K + DITI+FA G HGD FDG+GG LAHA++PGPGI GD HFD E WT + G
Sbjct: 492 -KGEADITILFAFGDHGDFYDFDGKGGTLAHAFYPGPGIQGDAHFDEAETWT---KSFQG 659
Query: 238 NDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXX 297
+LFLVAVHELGH+LGL HSN+P +IM P Y+Y+ + F+L DD+ IQ +YG
Sbjct: 660 TNLFLVAVHELGHSLGLRHSNNPKSIMYPTYRYLHPNTFRLSADDIHSIQSLYGAPVKNP 839
Query: 298 XXXXXXX--XXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRR 355
H+S+ +F+ + +
Sbjct: 840 SLTNPGSPPSTVCHQSL---------------------------------SFDAVTTVGD 920
Query: 356 EMFVFKDQWF-WRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF-FKGNKYWV 413
++F FKD +F WR+ + + I+ W +P I A YE N +F FK KYW+
Sbjct: 921 KIFFFKDWFFWWRLPGSPATN--ITSISSMWPTIPSGIQAAYEIGGRNQLFLFKDEKYWL 1094
Query: 414 FKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGY 473
+ +P YP + +LG ID+A++ K YFF +YWRY + MD Y
Sbjct: 1095INNLVPEPHYPRSIHSLGFPASVKKIDAAVFDPLRQKVYFFVDKQYWRYDVRQELMDAAY 1274
Query: 474 PKPIT 478
PK I+
Sbjct: 1275PKLIS 1289
Score = 42.7 bits (99), Expect = 0.10
Identities = 41/154 (26%), Positives = 68/154 (43%), Gaps = 9/154 (5%)
Frame = +3
Query: 387 GLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ---PGYPHDLITLGNGI---PPHGID 440
G PPS +++ + V G+K + FKD PG P IT + + P GI
Sbjct: 855 GSPPST-VCHQSLSFDAVTTVGDKIFFFKDWFFWWRLPGSPATNITSISSMWPTIPSGIQ 1031
Query: 441 SAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENG 497
+A + + FK ++YW + + +P YP+ I G P S + A
Sbjct: 1032 AAYEIGGRNQLFLFKDEKYWLINNLVP--EPHYPRSIHSL-GFPASVKKIDAAVFDPLRQ 1202
Query: 498 FTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMG 531
YF+ K+YW+++ + ++ YP+ I F G
Sbjct: 1203 KVYFFVDKQYWRYDVRQELMDAAYPKLISTHFPG 1304
>emb|X98517.1|RNMME R.norvegicus mRNA for macrophage metalloelastase (MME)
Length = 1632
Score = 248 bits (634), Expect = 9e-64
Identities = 146/425 (34%), Positives = 211/425 (49%), Gaps = 4/425 (0%)
Frame = +3
Query: 58 PRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRR 117
P + ++ L MQQF+G+ +TG++D +T+ M RCGVPD ++
Sbjct: 177 PMTKTKTNRNLLEEKLQEMQQFFGLEVTGQLDTSTLKIMHTSRCGVPD---------VQH 329
Query: 118 KRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELEN 177
R +W +++TY I N TP + + ++AF VW +VTPL F ++
Sbjct: 330 LRAVPQRSRWMKRYLTYRIYNYTPDMKRADVDYIFQKAFQVWSDVTPLRFRKIH------ 491
Query: 178 GKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDG 237
K + DITI+FA G HGD FDG+GG LAHA++PGPGI GD HFD E WT + G
Sbjct: 492 -KGEADITILFAFGDHGDFYDFDGKGGTLAHAFYPGPGIQGDAHFDEAETWT---KSFQG 659
Query: 238 NDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXX 297
+LFLVAVHELGH+LGL HSN+P +IM P Y+Y+ + F+L DD+ IQ +YG
Sbjct: 660 TNLFLVAVHELGHSLGLRHSNNPKSIMYPTYRYLHPNTFRLSADDIHSIQSLYGAPVKNP 839
Query: 298 XXXXXXX--XXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRR 355
H+S+ +F+ + +
Sbjct: 840 SLTNPGSPPSTVCHQSL---------------------------------SFDAVTTVGD 920
Query: 356 EMFVFKDQWF-WRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF-FKGNKYWV 413
++F FKD +F WR+ + + I+ W +P I A YE N +F FK KYW+
Sbjct: 921 KIFFFKDWFFWWRLPGSPATN--ITSISSMWPTIPSGIQAAYEIGGRNQLFLFKDEKYWL 1094
Query: 414 FKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGY 473
+ +P YP + +LG ID+A++ K YFF +YWRY + MD Y
Sbjct: 1095INNLVPEPHYPRSIHSLGFPASVKKIDAAVFDPLRQKVYFFVDKQYWRYDVRQELMDAAY 1274
Query: 474 PKPIT 478
PK I+
Sbjct: 1275PKLIS 1289
Score = 42.7 bits (99), Expect = 0.10
Identities = 41/154 (26%), Positives = 68/154 (43%), Gaps = 9/154 (5%)
Frame = +3
Query: 387 GLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ---PGYPHDLITLGNGI---PPHGID 440
G PPS +++ + V G+K + FKD PG P IT + + P GI
Sbjct: 855 GSPPST-VCHQSLSFDAVTTVGDKIFFFKDWFFWWRLPGSPATNITSISSMWPTIPSGIQ 1031
Query: 441 SAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENG 497
+A + + FK ++YW + + +P YP+ I G P S + A
Sbjct: 1032 AAYEIGGRNQLFLFKDEKYWLINNLVP--EPHYPRSIHSL-GFPASVKKIDAAVFDPLRQ 1202
Query: 498 FTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMG 531
YF+ K+YW+++ + ++ YP+ I F G
Sbjct: 1203 KVYFFVDKQYWRYDVRQELMDAAYPKLISTHFPG 1304
>ref|NM_022122.1| Homo sapiens matrix metalloproteinase 27 (MMP27), mRNA
Length = 1655
Score = 248 bits (632), Expect = 2e-63
Identities = 155/452 (34%), Positives = 217/452 (47%), Gaps = 4/452 (0%)
Frame = +1
Query: 64 RSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALT 123
++ + + MQ F+G+ +TGK+D NT++ MK PRCGVPD + + Y L
Sbjct: 166 KNRSLIDDKIREMQAFFGLTVTGKLDSNTLEIMKTPRCGVPD---------VGQYGYTLP 318
Query: 124 GQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVD 183
G W+ ++TY I N TP + AI+ +VW VTPL F ++ K D
Sbjct: 319 G--WRKYNLTYRIINYTPDMARAAVDEAIQEGLEVWSKVTPLKFTKI-------SKGIAD 471
Query: 184 ITIIFASGFHGDSSP-FDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFL 242
I I F + HG FDG G L HA+ PGPG+GGDTHFD DE WT G +LFL
Sbjct: 472 IMIAFRTRVHGRCPRYFDGPLGVLGHAFPPGPGLGGDTHFDEDENWTKDGA---GFNLFL 642
Query: 243 VAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXX 302
VA HE GHALGL HSND TA+M P Y ++ + L DD+ GIQ IYG
Sbjct: 643 VAAHEFGHALGLSHSNDQTALMFPNYVSLDPRKYPLSQDDINGIQSIYGGLPKEPAKPKE 822
Query: 303 XXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGN--FNTLAILRREMFVF 360
P+ CD + F+ + RRE+ F
Sbjct: 823 PTI----------------------------------PHACDPDLTFDAITTFRREVMFF 900
Query: 361 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 420
K + WR+ + + D I FW LP + A YEN + FK +W+ + +
Sbjct: 901 KGRHLWRIYYD-ITDVEFELIASFWPSLPADLQAAYENPRDKILVFKDENFWMIRGYAVL 1077
Query: 421 PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYP-KPITI 479
P YP + TLG ID+A+ + KTYFF G WR+ E +TMD G+P + +
Sbjct: 1078PDYPKSIHTLGFPGRVKKIDAAVCDKTTRKTYFFVGIWCWRFDEMTQTMDKGFPQRVVKH 1257
Query: 480 WKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
+ GI AF +K GF +F +G + ++++
Sbjct: 1258FPGISIRVDAAFQYK--GFFFFSRGSKQFEYD 1347
>gb|AF195192.1|AF195192 Homo sapiens matrix metalloprotease MMP-27 mRNA, complete cds
Length = 1655
Score = 248 bits (632), Expect = 2e-63
Identities = 155/452 (34%), Positives = 217/452 (47%), Gaps = 4/452 (0%)
Frame = +1
Query: 64 RSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALT 123
++ + + MQ F+G+ +TGK+D NT++ MK PRCGVPD + + Y L
Sbjct: 166 KNRSLIDDKIREMQAFFGLTVTGKLDSNTLEIMKTPRCGVPD---------VGQYGYTLP 318
Query: 124 GQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVD 183
G W+ ++TY I N TP + AI+ +VW VTPL F ++ K D
Sbjct: 319 G--WRKYNLTYRIINYTPDMARAAVDEAIQEGLEVWSKVTPLKFTKI-------SKGIAD 471
Query: 184 ITIIFASGFHGDSSP-FDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFL 242
I I F + HG FDG G L HA+ PGPG+GGDTHFD DE WT G +LFL
Sbjct: 472 IMIAFRTRVHGRCPRYFDGPLGVLGHAFPPGPGLGGDTHFDEDENWTKDGA---GFNLFL 642
Query: 243 VAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXX 302
VA HE GHALGL HSND TA+M P Y ++ + L DD+ GIQ IYG
Sbjct: 643 VAAHEFGHALGLSHSNDQTALMFPNYVSLDPRKYPLSQDDINGIQSIYGGLPKEPAKPKE 822
Query: 303 XXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGN--FNTLAILRREMFVF 360
P+ CD + F+ + RRE+ F
Sbjct: 823 PTI----------------------------------PHACDPDLTFDAITTFRREVMFF 900
Query: 361 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 420
K + WR+ + + D I FW LP + A YEN + FK +W+ + +
Sbjct: 901 KGRHLWRIYYD-ITDVEFELIASFWPSLPADLQAAYENPRDKILVFKDENFWMIRGYAVL 1077
Query: 421 PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYP-KPITI 479
P YP + TLG ID+A+ + KTYFF G WR+ E +TMD G+P + +
Sbjct: 1078PDYPKSIHTLGFPGRVKKIDAAVCDKTTRKTYFFVGIWCWRFDEMTQTMDKGFPQRVVKH 1257
Query: 480 WKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
+ GI AF +K GF +F +G + ++++
Sbjct: 1258FPGISIRVDAAFQYK--GFFFFSRGSKQFEYD 1347
>ref|NM_021412.1| Mus musculus matrix metalloproteinase 19 (Mmp19), mRNA
Length = 2132
Score = 244 bits (624), Expect = 1e-62
Identities = 180/527 (34%), Positives = 252/527 (47%), Gaps = 10/527 (1%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L +YGYL R E + AL Q+ G+ ++G++D T MK+PRCG+ D
Sbjct: 176 YLLQYGYLQKPLEGADDFR-LEDITEALRTFQEASGLPISGQMDDATRARMKQPRCGLED 352
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
FN + +Y L G W+ K++T+ I NV + P R A+ +AF W +V PL
Sbjct: 353 P------FNQKSLKYLLLGH-WRKKNLTFRIFNVPSTLSLPRVRAALHQAFKYWSSVAPL 511
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGD-----SSPFDGEGGFLAHAYFPGPGIGGDT 220
TF EV + G D+ ++ FHG S+ FDG G LAHA P G
Sbjct: 512 TFREV-----KAGWADIRLS------FHGRQSLYCSNTFDGPGKVLAHADIPELG---SI 649
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT G + G +L ++A HE+GHALGL HS A+MAP Y + FKL
Sbjct: 650 HFDKDELWTEGT--YQGVNLRIIAAHEVGHALGLGHSRYTQALMAPVYAGYQ-PFFKLHP 820
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ +YG V G P
Sbjct: 821 DDVAGIQALYGKRSPETRDEEEETEMLTVSPV--------------------TAKPGPMP 940
Query: 341 NICDGNFNTLAI-LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID-AVYEN 398
N C G + + + R + + FK + W V ++ G QI+ W GLP ++D AVY
Sbjct: 941 NPCSGEVDAMVLGPRGKTYAFKGDYVWTVTDSG--PGPLFQISALWEGLPGNLDAAVYSP 1114
Query: 399 SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
FFKGNK W + D + PG+P N + P+ +D+A++W K + FKG
Sbjct: 1115RTRRTHFFKGNKVWRYVDFKMSPGFPMKF----NRVEPN-LDAALYWPVNQKVFLFKGSG 1279
Query: 459 YWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
YW++ E +T YPKPI ++ G+P+ P A + ++G YF+KGKEYW+ N Q L+V
Sbjct: 1280YWQWDELARTDLSRYPKPIKELFTGVPDRPSAA-MSWQDGQVYFFKGKEYWRLNQQ-LRV 1453
Query: 518 EPGYPRSILKDFMGCDG--PTDRDKEGLSPPDDVDIVIKLDNTASTV 562
GYPR+ +M C P G P D V L T ST+
Sbjct: 1454AKGYPRN-TTHWMHCGSQTPDTNSSTGDVTPSTTDTV--LGTTPSTM 1585
>gb|AF155221.1|AF155221 Mus musculus matrix metalloproteinase 19 (Mmp19) mRNA, complete cds
Length = 2132
Score = 244 bits (624), Expect = 1e-62
Identities = 180/527 (34%), Positives = 252/527 (47%), Gaps = 10/527 (1%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L +YGYL R E + AL Q+ G+ ++G++D T MK+PRCG+ D
Sbjct: 176 YLLQYGYLQKPLEGADDFR-LEDITEALRTFQEASGLPISGQMDDATRARMKQPRCGLED 352
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
FN + +Y L G W+ K++T+ I NV + P R A+ +AF W +V PL
Sbjct: 353 P------FNQKSLKYLLLGH-WRKKNLTFRIFNVPSTLSLPRVRAALHQAFKYWSSVAPL 511
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGD-----SSPFDGEGGFLAHAYFPGPGIGGDT 220
TF EV + G D+ ++ FHG S+ FDG G LAHA P G
Sbjct: 512 TFREV-----KAGWADIRLS------FHGRQSLYCSNTFDGPGKVLAHADIPELG---SI 649
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT G + G +L ++A HE+GHALGL HS A+MAP Y + FKL
Sbjct: 650 HFDKDELWTEGT--YQGVNLRIIAAHEVGHALGLGHSRYTQALMAPVYAGYQ-PFFKLHP 820
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ +YG V G P
Sbjct: 821 DDVAGIQALYGKRSPETRDEEEETEMLTVSPV--------------------TAKPGPMP 940
Query: 341 NICDGNFNTLAI-LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID-AVYEN 398
N C G + + + R + + FK + W V ++ G QI+ W GLP ++D AVY
Sbjct: 941 NPCSGEVDAMVLGPRGKTYAFKGDYVWTVTDSG--PGPLFQISALWEGLPGNLDAAVYSP 1114
Query: 399 SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
FFKGNK W + D + PG+P N + P+ +D+A++W K + FKG
Sbjct: 1115RTRRTHFFKGNKVWRYVDFKMSPGFPMKF----NRVEPN-LDAALYWPVNQKVFLFKGSG 1279
Query: 459 YWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
YW++ E +T YPKPI ++ G+P+ P A + ++G YF+KGKEYW+ N Q L+V
Sbjct: 1280YWQWDELARTDLSRYPKPIKELFTGVPDRPSAA-MSWQDGQVYFFKGKEYWRLNQQ-LRV 1453
Query: 518 EPGYPRSILKDFMGCDG--PTDRDKEGLSPPDDVDIVIKLDNTASTV 562
GYPR+ +M C P G P D V L T ST+
Sbjct: 1454AKGYPRN-TTHWMHCGSQTPDTNSSTGDVTPSTTDTV--LGTTPSTM 1585
>gb|AF162446.1|AF162446 Mus musculus matrix metalloproteinase-19 mRNA, complete cds
Length = 1862
Score = 244 bits (624), Expect = 1e-62
Identities = 180/527 (34%), Positives = 252/527 (47%), Gaps = 10/527 (1%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L +YGYL R E + AL Q+ G+ ++G++D T MK+PRCG+ D
Sbjct: 176 YLLQYGYLQKPLEGADDFR-LEDITEALRTFQEASGLPISGQMDDATRARMKQPRCGLED 352
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
FN + +Y L G W+ K++T+ I NV + P R A+ +AF W +V PL
Sbjct: 353 P------FNQKSLKYLLLGH-WRKKNLTFRIFNVPSTLSLPRVRAALHQAFKYWSSVAPL 511
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGD-----SSPFDGEGGFLAHAYFPGPGIGGDT 220
TF EV + G D+ ++ FHG S+ FDG G LAHA P G
Sbjct: 512 TFREV-----KAGWADIRLS------FHGRQSLYCSNTFDGPGKVLAHADIPELG---SI 649
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT G + G +L ++A HE+GHALGL HS A+MAP Y + FKL
Sbjct: 650 HFDKDELWTEGT--YQGVNLRIIAAHEVGHALGLGHSRYTQALMAPVYAGYQ-PFFKLHP 820
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ +YG V G P
Sbjct: 821 DDVAGIQALYGKRSPETRDEEEETEMLTVSPV--------------------TAKPGPMP 940
Query: 341 NICDGNFNTLAI-LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID-AVYEN 398
N C G + + + R + + FK + W V ++ G QI+ W GLP ++D AVY
Sbjct: 941 NPCSGEVDAMVLGPRGKTYAFKGDYVWTVTDSG--PGPLFQISALWEGLPGNLDAAVYSP 1114
Query: 399 SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
FFKGNK W + D + PG+P N + P+ +D+A++W K + FKG
Sbjct: 1115RTRRTHFFKGNKVWRYVDFKMSPGFPMKF----NRVEPN-LDAALYWPVNQKVFLFKGSG 1279
Query: 459 YWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
YW++ E +T YPKPI ++ G+P+ P A + ++G YF+KGKEYW+ N Q L+V
Sbjct: 1280YWQWDELARTDLSRYPKPIKELFTGVPDRPSAA-MSWQDGQVYFFKGKEYWRLNQQ-LRV 1453
Query: 518 EPGYPRSILKDFMGCDG--PTDRDKEGLSPPDDVDIVIKLDNTASTV 562
GYPR+ +M C P G P D V L T ST+
Sbjct: 1454AKGYPRN-TTHWMHCGSQTPDTNSSTGDVTPSTTDTV--LGTTPSTM 1585
>gb|AF153199.1|AF153199 Mus musculus matrix metalloproteinase 19 mRNA, complete cds
Length = 1703
Score = 244 bits (624), Expect = 1e-62
Identities = 180/527 (34%), Positives = 252/527 (47%), Gaps = 10/527 (1%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L +YGYL R E + AL Q+ G+ ++G++D T MK+PRCG+ D
Sbjct: 148 YLLQYGYLQKPLEGADDFR-LEDITEALRTFQEASGLPISGQMDDATRARMKQPRCGLED 324
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
FN + +Y L G W+ K++T+ I NV + P R A+ +AF W +V PL
Sbjct: 325 P------FNQKSLKYLLLGH-WRKKNLTFRIFNVPSTLSLPRVRAALHQAFKYWSSVAPL 483
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGD-----SSPFDGEGGFLAHAYFPGPGIGGDT 220
TF EV + G D+ ++ FHG S+ FDG G LAHA P G
Sbjct: 484 TFREV-----KAGWADIRLS------FHGRQSLYCSNTFDGPGKVLAHADIPELG---SI 621
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT G + G +L ++A HE+GHALGL HS A+MAP Y + FKL
Sbjct: 622 HFDKDELWTEGT--YQGVNLRIIAAHEVGHALGLGHSRYTQALMAPVYAGYQ-PFFKLHP 792
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ +YG V G P
Sbjct: 793 DDVAGIQALYGKRSPETRDEEEETEMLTVSPV--------------------TAKPGPMP 912
Query: 341 NICDGNFNTLAI-LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID-AVYEN 398
N C G + + + R + + FK + W V ++ G QI+ W GLP ++D AVY
Sbjct: 913 NPCSGEVDAMVLGPRGKTYAFKGDYVWTVTDSG--PGPLFQISALWEGLPGNLDAAVYSP 1086
Query: 399 SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
FFKGNK W + D + PG+P N + P+ +D+A++W K + FKG
Sbjct: 1087RTRRTHFFKGNKVWRYVDFKMSPGFPMKF----NRVEPN-LDAALYWPVNQKVFLFKGSG 1251
Query: 459 YWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
YW++ E +T YPKPI ++ G+P+ P A + ++G YF+KGKEYW+ N Q L+V
Sbjct: 1252YWQWDELARTDLSRYPKPIKELFTGVPDRPSAA-MSWQDGQVYFFKGKEYWRLNQQ-LRV 1425
Query: 518 EPGYPRSILKDFMGCDG--PTDRDKEGLSPPDDVDIVIKLDNTASTV 562
GYPR+ +M C P G P D V L T ST+
Sbjct: 1426AKGYPRN-TTHWMHCGSQTPDTNSSTGDVTPSTTDTV--LGTTPSTM 1557
>ref|NM_032007.1| Mus musculus collagenase-like B (Mcolb-pending), mRNA
Length = 1400
Score = 239 bits (611), Expect = 4e-61
Identities = 159/458 (34%), Positives = 220/458 (47%), Gaps = 6/458 (1%)
Frame = +1
Query: 67 ETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALT--G 124
E M L MQQ +G+ +TG D T+ MKKPRCGVPD YA+T
Sbjct: 166 EVMAEKLRQMQQLFGLKVTGNSDPETLRAMKKPRCGVPDVAP-----------YAITHNN 312
Query: 125 QKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDI 184
+W H+TYSI N TP + AI RAF VW +VTPLTF+ V + + DI
Sbjct: 313 PRWTKTHLTYSILNYTPYLSKAVVEDAIARAFRVWSDVTPLTFQRV-------FEEEGDI 471
Query: 185 TIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVA 244
+ F G HGD FDG AHA+ PG G+GG+ H+D D+ WT N++ +LF V
Sbjct: 472 VLSFHRGDHGDLYTFDGSKYHFAHAFLPGLGLGGNVHYDLDQKWT---DNNEDFNLFYVT 642
Query: 245 VHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXX 304
HELGH+LGL HSND A+M P Y + D F L DD+ IQ +YG
Sbjct: 643 AHELGHSLGLSHSNDEEALMFPSYTWSNKD-FVLNQDDINRIQALYGPSPNPIQLTDAT- 816
Query: 305 XXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFKDQW 364
P F+ + R E+ FKD++
Sbjct: 817 ---------------------------------LDPCNSGLTFDAIITYRGEVIFFKDRF 897
Query: 365 FWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSD-GNFVFFKGNKYWVFKDTTLQPGY 423
+ RV + + + I W LP DA YE S FFKG+K W ++ + G+
Sbjct: 898 YIRV-ISFLPEPLIDVIDLTWPNLPGKFDAAYEVSGVDELRFFKGSKVWAVQEQNVLEGF 1074
Query: 424 PHDLITLGNGIPPH--GIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT-IW 480
P D+ + G P + ID+A+ E+ GKTYFF YWRY E ++MDPGYP+ I +
Sbjct: 1075PMDIQSF-FGFPSNVTNIDAAVCEEETGKTYFFVDHMYWRYDENTRSMDPGYPRLIAEDF 1251
Query: 481 KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVE 518
GI + KE+ F +F++ +Y +FN + +++
Sbjct: 1252PGIDYKVDDV-IQKEDNFYFFHQSIQY-RFNLKTRRID 1359
Score = 64.7 bits (156), Expect = 3e-08
Identities = 43/140 (30%), Positives = 63/140 (44%), Gaps = 3/140 (2%)
Frame = +1
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
G +FFK Y + + P D+I L P D+A V + FFKG + W
Sbjct: 868 GEVIFFKDRFY--IRVISFLPEPLIDVIDLTWPNLPGKFDAAYEVSGVDELRFFKGSKVW 1041
Query: 461 RYSEEMKTMDPGYPKPITIWKGIPESP---QGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
E+ + G+P I + G P + A +E G TYF+ YW+++ +
Sbjct: 1042 AVQEQ--NVLEGFPMDIQSFFGFPSNVTNIDAAVCEEETGKTYFFVDHMYWRYDENTRSM 1215
Query: 518 EPGYPRSILKDFMGCDGPTD 537
+PGYPR I +DF G D D
Sbjct: 1216 DPGYPRLIAEDFPGIDYKVD 1275
>emb|AJ278461.1|MMU278461 Mus musculus mRNA for putative matrix metalloproteinase (McolB
gene)
Length = 1400
Score = 239 bits (611), Expect = 4e-61
Identities = 159/458 (34%), Positives = 220/458 (47%), Gaps = 6/458 (1%)
Frame = +1
Query: 67 ETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALT--G 124
E M L MQQ +G+ +TG D T+ MKKPRCGVPD YA+T
Sbjct: 166 EVMAEKLRQMQQLFGLKVTGNSDPETLRAMKKPRCGVPDVAP-----------YAITHNN 312
Query: 125 QKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDI 184
+W H+TYSI N TP + AI RAF VW +VTPLTF+ V + + DI
Sbjct: 313 PRWTKTHLTYSILNYTPYLSKAVVEDAIARAFRVWSDVTPLTFQRV-------FEEEGDI 471
Query: 185 TIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVA 244
+ F G HGD FDG AHA+ PG G+GG+ H+D D+ WT N++ +LF V
Sbjct: 472 VLSFHRGDHGDLYTFDGSKYHFAHAFLPGLGLGGNVHYDLDQKWT---DNNEDFNLFYVT 642
Query: 245 VHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXX 304
HELGH+LGL HSND A+M P Y + D F L DD+ IQ +YG
Sbjct: 643 AHELGHSLGLSHSNDEEALMFPSYTWSNKD-FVLNQDDINRIQALYGPSPNPIQLTDAT- 816
Query: 305 XXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFVFKDQW 364
P F+ + R E+ FKD++
Sbjct: 817 ---------------------------------LDPCNSGLTFDAIITYRGEVIFFKDRF 897
Query: 365 FWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSD-GNFVFFKGNKYWVFKDTTLQPGY 423
+ RV + + + I W LP DA YE S FFKG+K W ++ + G+
Sbjct: 898 YIRV-ISFLPEPLIDVIDLTWPNLPGKFDAAYEVSGVDELRFFKGSKVWAVQEQNVLEGF 1074
Query: 424 PHDLITLGNGIPPH--GIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT-IW 480
P D+ + G P + ID+A+ E+ GKTYFF YWRY E ++MDPGYP+ I +
Sbjct: 1075PMDIQSF-FGFPSNVTNIDAAVCEEETGKTYFFVDHMYWRYDENTRSMDPGYPRLIAEDF 1251
Query: 481 KGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVE 518
GI + KE+ F +F++ +Y +FN + +++
Sbjct: 1252PGIDYKVDDV-IQKEDNFYFFHQSIQY-RFNLKTRRID 1359
Score = 64.7 bits (156), Expect = 3e-08
Identities = 43/140 (30%), Positives = 63/140 (44%), Gaps = 3/140 (2%)
Frame = +1
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
G +FFK Y + + P D+I L P D+A V + FFKG + W
Sbjct: 868 GEVIFFKDRFY--IRVISFLPEPLIDVIDLTWPNLPGKFDAAYEVSGVDELRFFKGSKVW 1041
Query: 461 RYSEEMKTMDPGYPKPITIWKGIPESP---QGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
E+ + G+P I + G P + A +E G TYF+ YW+++ +
Sbjct: 1042 AVQEQ--NVLEGFPMDIQSFFGFPSNVTNIDAAVCEEETGKTYFFVDHMYWRYDENTRSM 1215
Query: 518 EPGYPRSILKDFMGCDGPTD 537
+PGYPR I +DF G D D
Sbjct: 1216 DPGYPRLIAEDFPGIDYKVD 1275
>gb|U38321.1|HSU38321 Homo sapiens clone rasi-11 matrix metalloproteinase RASI-1 mRNA,
complete cds
Length = 2231
Score = 236 bits (602), Expect = 5e-60
Identities = 164/495 (33%), Positives = 245/495 (49%), Gaps = 8/495 (1%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L +YGYL + + E + AL A Q+ + ++G++D T M++PRCG+ D
Sbjct: 167 YLSQYGYLQKPLEGSNNFKP-EDITEALRAFQEASELPVSGQLDDATRARMRQPRCGLED 343
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
FN + +Y L G +W+ KH+T+ I N+ + R A+R+AF W NV PL
Sbjct: 344 P------FNQKTLKYLLLG-RWRKKHLTFRILNLPSTLPPHTARAALRQAFQDWSNVAPL 502
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGD-----SSPFDGEGGFLAHAYFPGPGIGGDT 220
TF+EV + G D+ ++ FHG S+ FDG G LAHA P G
Sbjct: 503 TFQEV-----QAGAADIRLS------FHGRQSSYCSNTFDGPGRVLAHADIPEL---GSV 640
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT G + G +L ++A HE+GHALGL HS A+MAP Y+ +FKL
Sbjct: 641 HFDEDEFWTEG--TYRGVNLRIIAAHEVGHALGLGHSRYSQALMAPVYEGYR-PHFKLHP 811
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ +YG P
Sbjct: 812 DDVAGIQALYG-------------------KKSPVIRDEEEEETELPTVPPVPTEPSPMP 934
Query: 341 NICDGNFNTLAI-LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID-AVYEN 398
+ C + + + R + + FK + W V ++ G +++ W GLP ++D AVY
Sbjct: 935 DPCSSELDAMMLGPRGKTYAFKGDYVWTVSDSG--PGPLFRVSALWEGLPGNLDAAVYSP 1108
Query: 399 SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
FFKG+K W + + + PG+P L N + P+ +D+A++W K + FKG
Sbjct: 1109RTQWIHFFKGDKVWRYINFKMSPGFPKKL----NRVEPN-LDAALYWPLNQKVFLFKGSG 1273
Query: 459 YWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
YW++ E +T YPKPI ++ G+P P A + ++G YF+KGK YW+ N Q L+V
Sbjct: 1274YWQWDELARTDFSSYPKPIKGLFTGVPNQPSAA-MSWQDGRVYFFKGKVYWRLNQQ-LRV 1447
Query: 518 EPGYPRSILKDFMGC 532
E GYPR+I ++M C
Sbjct: 1448EKGYPRNISHNWMHC 1492
>gb|U37791.1|HSU37791 Homo sapiens clone rasi-1 matrix metalloproteinase RASI-1 mRNA,
complete cds
Length = 3222
Score = 236 bits (602), Expect = 5e-60
Identities = 164/495 (33%), Positives = 245/495 (49%), Gaps = 8/495 (1%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L +YGYL + + E + AL A Q+ + ++G++D T M++PRCG+ D
Sbjct: 172 YLSQYGYLQKPLEGSNNFKP-EDITEALRAFQEASELPVSGQLDDATRARMRQPRCGLED 348
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
FN + +Y L G +W+ KH+T+ I N+ + R A+R+AF W NV PL
Sbjct: 349 P------FNQKTLKYLLLG-RWRKKHLTFRILNLPSTLPPHTARAALRQAFQDWSNVAPL 507
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGD-----SSPFDGEGGFLAHAYFPGPGIGGDT 220
TF+EV + G D+ ++ FHG S+ FDG G LAHA P G
Sbjct: 508 TFQEV-----QAGAADIRLS------FHGRQSSYCSNTFDGPGRVLAHADIPEL---GSV 645
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT G + G +L ++A HE+GHALGL HS A+MAP Y+ +FKL
Sbjct: 646 HFDEDEFWTEG--TYRGVNLRIIAAHEVGHALGLGHSRYSQALMAPVYEGYR-PHFKLHP 816
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ +YG P
Sbjct: 817 DDVAGIQALYG-------------------KKSPVIRDEEEEETELPTVPPVPTEPSPMP 939
Query: 341 NICDGNFNTLAI-LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID-AVYEN 398
+ C + + + R + + FK + W V ++ G +++ W GLP ++D AVY
Sbjct: 940 DPCSSELDAMMLGPRGKTYAFKGDYVWTVSDSG--PGPLFRVSALWEGLPGNLDAAVYSP 1113
Query: 399 SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
FFKG+K W + + + PG+P L N + P+ +D+A++W K + FKG
Sbjct: 1114RTQWIHFFKGDKVWRYINFKMSPGFPKKL----NRVEPN-LDAALYWPLNQKVFLFKGSG 1278
Query: 459 YWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
YW++ E +T YPKPI ++ G+P P A + ++G YF+KGK YW+ N Q L+V
Sbjct: 1279YWQWDELARTDFSSYPKPIKGLFTGVPNQPSAA-MSWQDGRVYFFKGKVYWRLNQQ-LRV 1452
Query: 518 EPGYPRSILKDFMGC 532
E GYPR+I ++M C
Sbjct: 1453EKGYPRNISHNWMHC 1497
>ref|NM_002429.2| Homo sapiens matrix metalloproteinase 19 (MMP19), transcript
variant rasi-1, mRNA
Length = 3249
Score = 236 bits (602), Expect = 5e-60
Identities = 164/495 (33%), Positives = 245/495 (49%), Gaps = 8/495 (1%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L +YGYL + + E + AL A Q+ + ++G++D T M++PRCG+ D
Sbjct: 199 YLSQYGYLQKPLEGSNNFKP-EDITEALRAFQEASELPVSGQLDDATRARMRQPRCGLED 375
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
FN + +Y L G +W+ KH+T+ I N+ + R A+R+AF W NV PL
Sbjct: 376 P------FNQKTLKYLLLG-RWRKKHLTFRILNLPSTLPPHTARAALRQAFQDWSNVAPL 534
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGD-----SSPFDGEGGFLAHAYFPGPGIGGDT 220
TF+EV + G D+ ++ FHG S+ FDG G LAHA P G
Sbjct: 535 TFQEV-----QAGAADIRLS------FHGRQSSYCSNTFDGPGRVLAHADIPEL---GSV 672
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT G + G +L ++A HE+GHALGL HS A+MAP Y+ +FKL
Sbjct: 673 HFDEDEFWTEG--TYRGVNLRIIAAHEVGHALGLGHSRYSQALMAPVYEGYR-PHFKLHP 843
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ +YG P
Sbjct: 844 DDVAGIQALYG-------------------KKSPVIRDEEEEETELPTVPPVPTEPSPMP 966
Query: 341 NICDGNFNTLAI-LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID-AVYEN 398
+ C + + + R + + FK + W V ++ G +++ W GLP ++D AVY
Sbjct: 967 DPCSSELDAMMLGPRGKTYAFKGDYVWTVSDSG--PGPLFRVSALWEGLPGNLDAAVYSP 1140
Query: 399 SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
FFKG+K W + + + PG+P L N + P+ +D+A++W K + FKG
Sbjct: 1141RTQWIHFFKGDKVWRYINFKMSPGFPKKL----NRVEPN-LDAALYWPLNQKVFLFKGSG 1305
Query: 459 YWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
YW++ E +T YPKPI ++ G+P P A + ++G YF+KGK YW+ N Q L+V
Sbjct: 1306YWQWDELARTDFSSYPKPIKGLFTGVPNQPSAA-MSWQDGRVYFFKGKVYWRLNQQ-LRV 1479
Query: 518 EPGYPRSILKDFMGC 532
E GYPR+I ++M C
Sbjct: 1480EKGYPRNISHNWMHC 1524
>emb|X92521.1|HSMMP19 H.sapiens mRNA for MMP-19 protein
Length = 1811
Score = 236 bits (602), Expect = 5e-60
Identities = 164/495 (33%), Positives = 245/495 (49%), Gaps = 8/495 (1%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L +YGYL + + E + AL A Q+ + ++G++D T M++PRCG+ D
Sbjct: 192 YLSQYGYLQKPLEGSNNFKP-EDITEALRAFQEASELPVSGQLDDATRARMRQPRCGLED 368
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
FN + +Y L G +W+ KH+T+ I N+ + R A+R+AF W NV PL
Sbjct: 369 P------FNQKTLKYLLLG-RWRKKHLTFRILNLPSTLPPHTARAALRQAFQDWSNVAPL 527
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGD-----SSPFDGEGGFLAHAYFPGPGIGGDT 220
TF+EV + G D+ ++ FHG S+ FDG G LAHA P G
Sbjct: 528 TFQEV-----QAGAADIRLS------FHGRQSSYCSNTFDGPGRVLAHADIPEL---GSV 665
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT G + G +L ++A HE+GHALGL HS A+MAP Y+ +FKL
Sbjct: 666 HFDEDEFWTEG--TYRGVNLRIIAAHEVGHALGLGHSRYSQALMAPVYEGYR-PHFKLHP 836
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ +YG P
Sbjct: 837 DDVAGIQALYG-------------------KKSPVIRDEEEEETELPTVPPVPTEPSPMP 959
Query: 341 NICDGNFNTLAI-LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID-AVYEN 398
+ C + + + R + + FK + W V ++ G +++ W GLP ++D AVY
Sbjct: 960 DPCSSELDAMMLGPRGKTYAFKGDYVWTVSDSG--PGPLFRVSALWEGLPGNLDAAVYSP 1133
Query: 399 SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
FFKG+K W + + + PG+P L N + P+ +D+A++W K + FKG
Sbjct: 1134RTQWIHFFKGDKVWRYINFKMSPGFPKKL----NRVEPN-LDAALYWPLNQKVFLFKGSG 1298
Query: 459 YWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
YW++ E +T YPKPI ++ G+P P A + ++G YF+KGK YW+ N Q L+V
Sbjct: 1299YWQWDELARTDFSSYPKPIKGLFTGVPNQPSAA-MSWQDGRVYFFKGKVYWRLNQQ-LRV 1472
Query: 518 EPGYPRSILKDFMGC 532
E GYPR+I ++M C
Sbjct: 1473EKGYPRNISHNWMHC 1517
>emb|Y08622.1|HSRMMP18 H.sapiens mRNA for matrix metalloproteinase MMP-18
Length = 2248
Score = 234 bits (597), Expect = 2e-59
Identities = 164/495 (33%), Positives = 244/495 (49%), Gaps = 8/495 (1%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L +YGYL + + E + AL A Q+ + ++G++D T M++PRCG+ D
Sbjct: 191 YLSQYGYLQKPLEGSNNFKP-EDITEALRAFQEASELPVSGQLDDATRARMRQPRCGLED 367
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
FN + +Y L G +W+ KH+T+ I N+ + R A+R+AF W NV PL
Sbjct: 368 P------FNQKTLKYLLLG-RWRKKHLTFRILNLPSTLPPHTARAALRQAFQDWSNVAPL 526
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGD-----SSPFDGEGGFLAHAYFPGPGIGGDT 220
TF+EV + G D+ ++ FHG S+ FDG G LAHA P G
Sbjct: 527 TFQEV-----QAGAADIRLS------FHGRQSSYCSNTFDGPGRVLAHADIPEL---GSV 664
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
HFD DE WT G + G +L ++A HE+GHALGL HS A+MAP Y+ +FKL
Sbjct: 665 HFDEDEFWTEG--TYRGVNLRIIAAHEVGHALGLGHSRYSQALMAPVYEGYR-PHFKLHP 835
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD+ GIQ +YG P
Sbjct: 836 DDVAGIQALYG-------------------KKSPVIRDEEEEETELPTVPPVPTEPSPMP 958
Query: 341 NICDGNFNTLAI-LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSID-AVYEN 398
+ C + + + R + + FK + W V ++ G +++ W GLP ++D AVY
Sbjct: 959 DPCSSELDAMMLGPRGKTYAFKGDYVWTVSDSG--PGPLFRVSALWEGLPGNLDAAVYSP 1132
Query: 399 SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
FFKG+K W + + + PG+P L N P+ +D+A++W K + FKG
Sbjct: 1133RTQWIHFFKGDKVWRYINFKMSPGFPKKL----NRSEPN-LDAALYWPLNQKVFLFKGSG 1297
Query: 459 YWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
YW++ E +T YPKPI ++ G+P P A + ++G YF+KGK YW+ N Q L+V
Sbjct: 1298YWQWDELARTDFSSYPKPIKGLFTGVPNQPSAA-MSWQDGRVYFFKGKVYWRLNQQ-LRV 1471
Query: 518 EPGYPRSILKDFMGC 532
E GYPR+I ++M C
Sbjct: 1472EKGYPRNISHNWMHC 1516
>ref|NM_024302.2| Homo sapiens matrix metalloproteinase 28 (MMP28), transcript
variant 1, mRNA
Length = 2481
Score = 231 bits (590), Expect = 1e-58
Identities = 164/533 (30%), Positives = 247/533 (45%), Gaps = 23/533 (4%)
Frame = +3
Query: 23 LQTLLW----ILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQ 78
LQ LLW A G E E +L+KYGYL P+ ++ A+ A Q
Sbjct: 309 LQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGYLNEQVPKAP---TSTRFSDAIRAFQW 479
Query: 79 FYGINMTGKVDRNTIDWMKKPRCGVPDQT--------------RGSSKFNIRRKRYALTG 124
+ ++G +DR T+ M +PRCGV D R +K R+KR+A G
Sbjct: 480 VSQLPVSGVLDRATLRQMTRPRCGVTDTNSYAAWAERISDLFARHRTKMR-RKKRFAKQG 656
Query: 125 QKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDI 184
KW +H++Y + N + +P R A+R AF +W NV+ L F E P DI
Sbjct: 657 NKWYKQHLSYRLVNWPEHLPEPAVRGAVRAAFQLWSNVSALEFWEAP------ATGPADI 818
Query: 185 TIIFASGFHGD--SSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFL 242
+ F G H D + FDG GG LAHA+ P G+ HFD DE W+L G +LF+
Sbjct: 819 RLTFFQGDHNDGLGNAFDGPGGALAHAFLPR---RGEAHFDQDERWSLS--RRRGRNLFV 983
Query: 243 VAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXX 302
V HE+GH LGL HS P A+MAP+Y+ + D L DD+ +Q +YG
Sbjct: 984 VLAHEIGHTLGLTHSPAPRALMAPYYKRLGRDAL-LSWDDVLAVQSLYGKPLGGSV---- 1148
Query: 303 XXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILR-REMFVFK 361
+V P C +F+ + + R +++++FK
Sbjct: 1149--------AVQLPGKLFTDFETWDSYSPQGRRPETQGPKYCHSSFDAITVDRQQQLYIFK 1304
Query: 362 DQWFWRV-RNNRVMDGYPMQITYFWRGLPPSIDAVYEN-SDGNFVFFKGNKYWVFKDTTL 419
FW V + V + P+Q W GLPP+I+A + +DG+F FFKG + W F+
Sbjct: 1305GSHFWEVAADGNVSEPRPLQER--WVGLPPNIEAAAVSLNDGDFYFFKGGRCWRFRGPKP 1478
Query: 420 QPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITI 479
G P + G+P H D+A+++ + + FKG RY+ + ++P YP+ +
Sbjct: 1479VWGLPQ--LCRAGGLPRHP-DAALFFPPLRRLILFKGARYYVLARGGLQVEPYYPRSLQD 1649
Query: 480 WKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGC 532
W GIPE GA + + +G F++ YW+ + L+ + +MGC
Sbjct: 1650WGGIPEEVSGA-LPRPDGSIIFFRDDRYWRLDQAKLQATTSGRWATELPWMGC 1805
>gb|AF219624.1|AF219624 Homo sapiens matrix metalloproteinase-28 precursor, mRNA, complete
cds
Length = 1817
Score = 231 bits (590), Expect = 1e-58
Identities = 164/533 (30%), Positives = 247/533 (45%), Gaps = 23/533 (4%)
Frame = +2
Query: 23 LQTLLW----ILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQ 78
LQ LLW A G E E +L+KYGYL P+ ++ A+ A Q
Sbjct: 203 LQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGYLNEQVPKAP---TSTRFSDAIRAFQW 373
Query: 79 FYGINMTGKVDRNTIDWMKKPRCGVPDQT--------------RGSSKFNIRRKRYALTG 124
+ ++G +DR T+ M +PRCGV D R +K R+KR+A G
Sbjct: 374 VSQLPVSGVLDRATLRQMTRPRCGVTDTNSYAAWAERISDLFARHRTKMR-RKKRFAKQG 550
Query: 125 QKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDI 184
KW +H++Y + N + +P R A+R AF +W NV+ L F E P DI
Sbjct: 551 NKWYKQHLSYRLVNWPEHLPEPAVRGAVRAAFQLWSNVSALEFWEAP------ATGPADI 712
Query: 185 TIIFASGFHGD--SSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFL 242
+ F G H D + FDG GG LAHA+ P G+ HFD DE W+L G +LF+
Sbjct: 713 RLTFFQGDHNDGLGNAFDGPGGALAHAFLPR---RGEAHFDQDERWSLS--RRRGRNLFV 877
Query: 243 VAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXX 302
V HE+GH LGL HS P A+MAP+Y+ + D L DD+ +Q +YG
Sbjct: 878 VLAHEIGHTLGLTHSPAPRALMAPYYKRLGRDAL-LSWDDVLAVQSLYGKPLGGSV---- 1042
Query: 303 XXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILR-REMFVFK 361
+V P C +F+ + + R +++++FK
Sbjct: 1043--------AVQLPGKLFTDFETWDSYSPQGRRPETQGPKYCHSSFDAITVDRQQQLYIFK 1198
Query: 362 DQWFWRV-RNNRVMDGYPMQITYFWRGLPPSIDAVYEN-SDGNFVFFKGNKYWVFKDTTL 419
FW V + V + P+Q W GLPP+I+A + +DG+F FFKG + W F+
Sbjct: 1199GSHFWEVAADGNVSEPRPLQER--WVGLPPNIEAAAVSLNDGDFYFFKGGRCWRFRGPKP 1372
Query: 420 QPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITI 479
G P + G+P H D+A+++ + + FKG RY+ + ++P YP+ +
Sbjct: 1373VWGLPQ--LCRAGGLPRHP-DAALFFPPLRRLILFKGARYYVLARGGLQVEPYYPRSLQD 1543
Query: 480 WKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGC 532
W GIPE GA + + +G F++ YW+ + L+ + +MGC
Sbjct: 1544WGGIPEEVSGA-LPRPDGSIIFFRDDRYWRLDQAKLQATTSGRWATELPWMGC 1699
>gb|AF330002.1|AF330002 Homo sapiens matrix metalloprotease MMP25 mRNA, complete cds
Length = 2484
Score = 231 bits (590), Expect = 1e-58
Identities = 164/533 (30%), Positives = 247/533 (45%), Gaps = 23/533 (4%)
Frame = +3
Query: 23 LQTLLW----ILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQ 78
LQ LLW A G E E +L+KYGYL P+ ++ A+ A Q
Sbjct: 309 LQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGYLNEQVPKAP---TSTRFSDAIRAFQW 479
Query: 79 FYGINMTGKVDRNTIDWMKKPRCGVPDQT--------------RGSSKFNIRRKRYALTG 124
+ ++G +DR T+ M +PRCGV D R +K R+KR+A G
Sbjct: 480 VSQLPVSGVLDRATLRQMTRPRCGVTDTNSYAAWAERISDLFARHRTKMR-RKKRFAKQG 656
Query: 125 QKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDI 184
KW +H++Y + N + +P R A+R AF +W NV+ L F E P DI
Sbjct: 657 NKWYKQHLSYRLVNWPEHLPEPAVRGAVRAAFQLWSNVSALEFWEAP------ATGPADI 818
Query: 185 TIIFASGFHGD--SSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFL 242
+ F G H D + FDG GG LAHA+ P G+ HFD DE W+L G +LF+
Sbjct: 819 RLTFFQGDHNDGLGNAFDGPGGALAHAFLPR---RGEAHFDQDERWSLS--RRRGRNLFV 983
Query: 243 VAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXX 302
V HE+GH LGL HS P A+MAP+Y+ + D L DD+ +Q +YG
Sbjct: 984 VLAHEIGHTLGLTHSPAPRALMAPYYKRLGRDAL-LSWDDVLAVQSLYGKPLGGSV---- 1148
Query: 303 XXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILR-REMFVFK 361
+V P C +F+ + + R +++++FK
Sbjct: 1149--------AVQLPGKLFTDFETWDSYSPQGRRPETQGPKYCHSSFDAITVDRQQQLYIFK 1304
Query: 362 DQWFWRV-RNNRVMDGYPMQITYFWRGLPPSIDAVYEN-SDGNFVFFKGNKYWVFKDTTL 419
FW V + V + P+Q W GLPP+I+A + +DG+F FFKG + W F+
Sbjct: 1305GSHFWEVAADGNVSEPRPLQER--WVGLPPNIEAAAVSLNDGDFYFFKGGRCWRFRGPKP 1478
Query: 420 QPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITI 479
G P + G+P H D+A+++ + + FKG RY+ + ++P YP+ +
Sbjct: 1479VWGLPQ--LCRAGGLPRHP-DAALFFPPLRRLILFKGARYYVLARGGLQVEPYYPRSLQD 1649
Query: 480 WKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGC 532
W GIPE GA + + +G F++ YW+ + L+ + +MGC
Sbjct: 1650WGGIPEEVSGA-LPRPDGSIIFFRDDRYWRLDQAKLQATTSGRWATELPWMGC 1805
>gb|AF354290.1|AF354290 Xenopus laevis matrix metalloproteinase MT3-MMP gene, partial cds
Length = 375
Score = 231 bits (588), Expect = 2e-58
Identities = 111/123 (90%), Positives = 113/123 (91%)
Frame = +2
Query: 485 ESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDKEGLS 544
ESPQGAFV KENG+TYFYKGKEYWKF N L+VEPGYPRSILKDFMGCD TD DKE S
Sbjct: 2 ESPQGAFVDKENGYTYFYKGKEYWKFQNLNLRVEPGYPRSILKDFMGCDSSTDGDKERTS 181
Query: 545 PPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQ 604
P DDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQ
Sbjct: 182 PQDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQ 361
Query: 605 EWV 607
EWV
Sbjct: 362 EWV 370
>gb|AF315683.1|AF315683 Homo sapiens matrix metalloproteinase 28 (MMP28) mRNA, complete cds
Length = 1753
Score = 229 bits (585), Expect = 5e-58
Identities = 164/533 (30%), Positives = 246/533 (45%), Gaps = 23/533 (4%)
Frame = +1
Query: 23 LQTLLW----ILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQ 78
LQ LLW A G E E +L+KYGYL P+ ++ A+ A Q
Sbjct: 49 LQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGYLNEQVPKAP---TSTRFSDAIRAFQW 219
Query: 79 FYGINMTGKVDRNTIDWMKKPRCGVPDQT--------------RGSSKFNIRRKRYALTG 124
+ ++G +DR T+ M +PRCGV D R +K R+KR+A G
Sbjct: 220 VSQLPVSGVLDRATLRQMTRPRCGVTDTNSYAAWAERISDLFARHRTKMR-RKKRFAKQG 396
Query: 125 QKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDI 184
KW +H++Y + N + +P R A+R AF +W NV+ L F E P DI
Sbjct: 397 NKWYKQHLSYRLVNWPEHLPEPAVRGAVRAAFQLWSNVSALEFWEAP------ATGPADI 558
Query: 185 TIIFASGFHGD--SSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFL 242
+ F G H D + FDG GG LAHA+ P G+ HFD DE W+L G +LF+
Sbjct: 559 RLTFFQGDHNDGLGNAFDGPGGALAHAFLPR---RGEAHFDQDERWSLS--RRRGRNLFV 723
Query: 243 VAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXX 302
V HE+GH LGL HS P A+MAP+Y+ + D L DD+ +Q +YG
Sbjct: 724 VLAHEIGHTLGLTHSPAPRALMAPYYKRLGRDAL-LSWDDVLAVQSLYGKPLGGSV---- 888
Query: 303 XXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILR-REMFVFK 361
+V P C +F+ + + R +++++FK
Sbjct: 889 --------AVQLPGKLFTDFETWDSYSPQGRRPETQGPKYCHSSFDAITVDRQQQLYIFK 1044
Query: 362 DQWFWRV-RNNRVMDGYPMQITYFWRGLPPSIDAVYEN-SDGNFVFFKGNKYWVFKDTTL 419
FW V + V + P+Q W GLPP+I+A + +DG+F FFKG + W F+
Sbjct: 1045GSHFWEVAADGNVSEPRPLQER--WVGLPPNIEAAAVSLNDGDFYFFKGGRCWRFRGPKP 1218
Query: 420 QPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITI 479
G P + G+P H D+A+++ + + FKG RY+ + ++P YP+ +
Sbjct: 1219VWGLPQ--LCRAGGLPRHP-DAALFFPPLRRLILFKGARYYVLARGGLQVEPYYPRSLQD 1389
Query: 480 WKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGC 532
W GIPE GA + + +G F++ YW + L+ + +MGC
Sbjct: 1390WGGIPEEVSGA-LPRPDGSIIFFRDDRYWCLDQAKLQATTSGRWATELPWMGC 1545
>gb|AC090980.5| Homo sapiens chromosome 8, clone RP11-433O22, complete sequence
Length = 182881
Score = 229 bits (584), Expect = 6e-58
Identities = 104/112 (92%), Positives = 110/112 (97%)
Frame = -1
Query: 132 ITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASG 191
+T+SIKNVTPKVGDPETR+AIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASG
Sbjct: 31276 LTFSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASG 31097
Query: 192 FHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLV 243
FHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDG +F++
Sbjct: 31096 FHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGKYMFVL 30941
Score = 107 bits (268), Expect = 3e-21
Identities = 59/93 (63%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
Frame = -1
Query: 40 YFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKP 99
Y ++VWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTI+ + P
Sbjct: 60613 YLLLQVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIE*VMAP 60434
Query: 100 ---RCGVPDQTRGSSKFNIRRKRYALTGQKWQH 129
QT+ S K + T QKW +
Sbjct: 60433 ILLSFWSLSQTK*SGKLYMNS-----TNQKWSN 60350
Score = 94.4 bits (233), Expect = 3e-17
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = -3
Query: 95 WMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKN 138
WMKKPRCGVPDQTRGSSKF+IRRKRYALTGQKWQHKHITY KN
Sbjct: 49889 WMKKPRCGVPDQTRGSSKFHIRRKRYALTGQKWQHKHITYRYKN 49758
>gb|AF162688.1|AF162688 Hydra vulgaris matrix metalloproteinase (mmp) mRNA, complete cds
Length = 1634
Score = 219 bits (558), Expect = 6e-55
Identities = 142/472 (30%), Positives = 237/472 (50%), Gaps = 9/472 (1%)
Frame = +2
Query: 63 LRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYAL 122
+ + + +++++ +Q+F GI ++G +D T + ++ PRCG+PD + + R +RY L
Sbjct: 170 INNEKEIRNSIENLQRFAGIPVSGILDAPTQELIETPRCGLPDFKKPNES---RNRRYTL 340
Query: 123 TGQKWQHKHITYSI-KNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRD 181
G W+ +T+ + N + E + +AF +W+ VT L F ++ +E +
Sbjct: 341 QGTTWKKNELTWKLLNNNNDGLTRGEIETTLHKAFSMWEAVTNLKFRQLQINE----NKK 508
Query: 182 VDITIIFASGFHGDSSPFDGEGGFLAHAYFP--GPGIGGDTHFDSDEPWTLGNPNHDGND 239
DI I FA G+H D FDG GG LAHA++P G+ GD HFD E +T+ +P +G
Sbjct: 509 ADIEIKFAQGYHDDPYSFDGFGGTLAHAFYPHTNEGLSGDVHFDDAEKFTIESP--EGRS 682
Query: 240 LFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXX 299
L VAVHE+GH++GLEHSN A+M P+Y+ + + +L +DD+ GIQ IYG
Sbjct: 683 LLWVAVHEIGHSIGLEHSNVKEALMFPWYRVQDVRDIQLSDDDVLGIQSIYGSKKSIMLP 862
Query: 300 XXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILRREMFV 359
S K I D + +
Sbjct: 863 STVTPTKKMKNSFQ------------------------MKAVILDKSTGV-------TYA 949
Query: 360 FKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTT- 418
F D F+++ N+ P ++ + + S+++ Y +SDG +FFKG +Y+ +K+ +
Sbjct: 950 FNDDEFYKINNDLKKTEGPFTVSSLFPEV-NSVNSGYMDSDGKLIFFKGTRYYTYKNFSD 1126
Query: 419 ---LQPGYPHDLIT-LGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYP 474
L+ G D + +G+ ID+A W + G+TY F D Y+R+ +D G+P
Sbjct: 1127RKLLESGSIFDKYKGIKSGVKT--IDAAFVWNN-GRTYVFIEDEYYRFGGTKNVLDAGFP 1297
Query: 475 KPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSI 525
+ I W G+P++ FV + NG TYF+KG +++ N + +V YP+SI
Sbjct: 1298RKIVDNWTGVPKNIDSVFVWR-NGVTYFFKGSLFYRVNEK-GQVLLNYPKSI 1447
Score = 42.7 bits (99), Expect = 0.10
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Frame = +2
Query: 449 GKTYFFKGDRYWRYSE--EMKTMDPG--YPKPITIWKGIPESPQGAFVHKENGFTYFYKG 504
GK FFKG RY+ Y + K ++ G + K I G+ ++ AFV NG TY +
Sbjct: 1070 GKLIFFKGTRYYTYKNFSDRKLLESGSIFDKYKGIKSGV-KTIDAAFVWN-NGRTYVFIE 1243
Query: 505 KEYWKFNNQILKVEPGYPRSILKDFMG 531
EY++F ++ G+PR I+ ++ G
Sbjct: 1244 DEYYRFGGTKNVLDAGFPRKIVDNWTG 1324
>gb|BC002631.1|BC002631 Homo sapiens, clone MGC:4164 IMAGE:3610296, mRNA, complete cds
Length = 2100
Score = 219 bits (558), Expect = 6e-55
Identities = 164/554 (29%), Positives = 247/554 (43%), Gaps = 44/554 (7%)
Frame = +2
Query: 23 LQTLLW----ILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQ 78
LQ LLW A G E E +L+KYGYL P+ ++ A+ A Q
Sbjct: 290 LQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGYLNEQVPKAP---TSTRFSDAIRAFQW 460
Query: 79 FYGINMTGKVDRNTIDWMKKPRCGVPDQT--------------RGSSKFNIRRKRYALTG 124
+ ++G +DR T+ M +PRCGV D R +K R+KR+A G
Sbjct: 461 VSQLPVSGVLDRATLRQMTRPRCGVTDTNSYAAWAERISDLFARHRTKMR-RKKRFAKQG 637
Query: 125 QKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDI 184
KW +H++Y + N + +P R A+R AF +W NV+ L F E P DI
Sbjct: 638 NKWYKQHLSYRLVNWPEHLPEPAVRGAVRAAFQLWSNVSALEFWEAP------ATGPADI 799
Query: 185 TIIFASGFHGD--SSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFL 242
+ F G H D + FDG GG LAHA+ P G+ HFD DE W+L G +LF+
Sbjct: 800 RLTFFQGDHNDGLGNAFDGPGGALAHAFLPR---RGEAHFDQDERWSLS--RRRGRNLFV 964
Query: 243 VAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXX 302
V HE+GH LGL HS P A+MAP+Y+ + D L DD+ +Q +YG
Sbjct: 965 VLAHEIGHTLGLTHSPAPRALMAPYYKRLGRDAL-LSWDDVLAVQSLYGKPLGGSV---- 1129
Query: 303 XXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILR-REMFVFK 361
+V P C +F+ + + R +++++FK
Sbjct: 1130--------AVQLPGKLFTDFETWDSYSPQGRRPETQGPKYCHSSFDAITVDRQQQLYIFK 1285
Query: 362 DQWFWRV-RNNRVMDGYPMQITYFWRGLPPSIDAVYEN-SDGNFVFFK------------ 407
FW V + V + P+Q W GLPP+I+A + +DG+F FFK
Sbjct: 1286GSHFWEVAADGNVSEPRPLQER--WVGLPPNIEAAAVSLNDGDFYFFKVQSV*LI*IPTI 1459
Query: 408 ---------GNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
G + W F+ G P + G+P H D+A+++ + + FKG R
Sbjct: 1460VGSSLKESRGGRCWRFRGPKPVWGLPQ--LCRAGGLPRHP-DAALFFPPLRRLILFKGAR 1630
Query: 459 YWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVE 518
Y+ + ++P YP+ + W GIPE GA + + +G F++ YW+ + L+
Sbjct: 1631YYVLARGGLQVEPYYPRSLQDWGGIPEEVSGA-LPRPDGSIIFFRDDRYWRLDQAKLQAT 1807
Query: 519 PGYPRSILKDFMGC 532
+ +MGC
Sbjct: 1808TSGRWATELPWMGC 1849
>ref|NM_032950.1| Homo sapiens matrix metalloproteinase 28 (MMP28), transcript
variant 2, mRNA
Length = 2525
Score = 219 bits (558), Expect = 6e-55
Identities = 164/554 (29%), Positives = 247/554 (43%), Gaps = 44/554 (7%)
Frame = +2
Query: 23 LQTLLW----ILCATVCGTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQ 78
LQ LLW A G E E +L+KYGYL P+ ++ A+ A Q
Sbjct: 290 LQLLLWGHLDAQPAERGGQELRKEAEAFLEKYGYLNEQVPKAP---TSTRFSDAIRAFQW 460
Query: 79 FYGINMTGKVDRNTIDWMKKPRCGVPDQT--------------RGSSKFNIRRKRYALTG 124
+ ++G +DR T+ M +PRCGV D R +K R+KR+A G
Sbjct: 461 VSQLPVSGVLDRATLRQMTRPRCGVTDTNSYAAWAERISDLFARHRTKMR-RKKRFAKQG 637
Query: 125 QKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDI 184
KW +H++Y + N + +P R A+R AF +W NV+ L F E P DI
Sbjct: 638 NKWYKQHLSYRLVNWPEHLPEPAVRGAVRAAFQLWSNVSALEFWEAP------ATGPADI 799
Query: 185 TIIFASGFHGD--SSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFL 242
+ F G H D + FDG GG LAHA+ P G+ HFD DE W+L G +LF+
Sbjct: 800 RLTFFQGDHNDGLGNAFDGPGGALAHAFLPR---RGEAHFDQDERWSLS--RRRGRNLFV 964
Query: 243 VAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXX 302
V HE+GH LGL HS P A+MAP+Y+ + D L DD+ +Q +YG
Sbjct: 965 VLAHEIGHTLGLTHSPAPRALMAPYYKRLGRDAL-LSWDDVLAVQSLYGKPLGGSV---- 1129
Query: 303 XXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTLAILR-REMFVFK 361
+V P C +F+ + + R +++++FK
Sbjct: 1130--------AVQLPGKLFTDFETWDSYSPQGRRPETQGPKYCHSSFDAITVDRQQQLYIFK 1285
Query: 362 DQWFWRV-RNNRVMDGYPMQITYFWRGLPPSIDAVYEN-SDGNFVFFK------------ 407
FW V + V + P+Q W GLPP+I+A + +DG+F FFK
Sbjct: 1286GSHFWEVAADGNVSEPRPLQER--WVGLPPNIEAAAVSLNDGDFYFFKVQSV*LI*IPTI 1459
Query: 408 ---------GNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
G + W F+ G P + G+P H D+A+++ + + FKG R
Sbjct: 1460VGSSLKESRGGRCWRFRGPKPVWGLPQ--LCRAGGLPRHP-DAALFFPPLRRLILFKGAR 1630
Query: 459 YWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVE 518
Y+ + ++P YP+ + W GIPE GA + + +G F++ YW+ + L+
Sbjct: 1631YYVLARGGLQVEPYYPRSLQDWGGIPEEVSGA-LPRPDGSIIFFRDDRYWRLDQAKLQAT 1807
Query: 519 PGYPRSILKDFMGC 532
+ +MGC
Sbjct: 1808TSGRWATELPWMGC 1849
>ref|XM_083968.1| Homo sapiens matrix metalloproteinase 28 (MMP28), mRNA
Length = 2096
Score = 182 bits (461), Expect(2) = 5e-53
Identities = 122/393 (31%), Positives = 186/393 (47%), Gaps = 5/393 (1%)
Frame = +2
Query: 145 DPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDS--SPFDGE 202
+P R A+R AF +W NV+ L F E P + DI + F G H D + FDG
Sbjct: 332 EPAVRGAVRAAFQLWSNVSALEFWEAPATG------PADIRLTFFQGDHNDGLGNAFDGP 493
Query: 203 GGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTA 262
GG LAHA+ P G + HFD DE W+L G +LF+V HE+GH LGL HS P A
Sbjct: 494 GGALAHAFLPRRG---EAHFDQDERWSLSRRR--GRNLFVVLAHEIGHTLGLTHSPAPRA 658
Query: 263 IMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXX 322
+MAP+Y+ + D L DD+ +Q +YG +V
Sbjct: 659 LMAPYYKRLGRDAL-LSWDDVLAVQSLYGKPLGGSV------------AVQLPGKLFTDF 799
Query: 323 XXXXXXXXXXXXXXGAKPNICDGNFNTLAILR-REMFVFKDQWFWRV-RNNRVMDGYPMQ 380
P C +F+ + + R +++++FK FW V + V + P+Q
Sbjct: 800 ETWDSYSPQGRRPETQGPKYCHSSFDAITVDRQQQLYIFKGSHFWEVAADGNVSEPRPLQ 979
Query: 381 ITYFWRGLPPSIDAVYEN-SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGI 439
W GLPP+I+A + +DG+F FFKG + W F+ G P + G+P H
Sbjct: 980 ER--WVGLPPNIEAAAVSLNDGDFYFFKGGRCWRFRGPKPVWGLPQ--LCRAGGLPRHP- 1144
Query: 440 DSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFT 499
D+A+++ + + FKG RY+ + ++P YP+ + W GIPE GA + + +G
Sbjct: 1145DAALFFPPLRRLILFKGARYYVLARGGLQVEPYYPRSLQDWGGIPEEVSGA-LPRPDGSI 1321
Query: 500 YFYKGKEYWKFNNQILKVEPGYPRSILKDFMGC 532
F++ YW+ + L+ + +MGC
Sbjct: 1322IFFRDDRYWRLDQAKLQATTSGRWATELPWMGC 1420
Score = 52.8 bits (125), Expect(2) = 5e-53
Identities = 33/107 (30%), Positives = 52/107 (47%), Gaps = 14/107 (13%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L+KYGYL P+ ++ A+ A Q + ++G +DR T+ M +PRCGV D
Sbjct: 6 FLEKYGYLNEQVPKAP---TSTRFSDAIRAFQWVSQLPVSGVLDRATLRQMTRPRCGVTD 176
Query: 106 Q--------------TRGSSKFNIRRKRYALTGQKWQHKHITYSIKN 138
R +K R+KR+A G KW +H++Y + N
Sbjct: 177 TNSYAAWAERISDLFARHRTKMR-RKKRFAKQGNKWYKQHLSYRLVN 314
>gb|U65656.1|RNU65656 Rattus norvegicus gelatinase A mRNA, complete cds
Length = 3053
Score = 207 bits (526), Expect = 3e-51
Identities = 127/320 (39%), Positives = 165/320 (50%), Gaps = 7/320 (2%)
Frame = +1
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
T++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1426 TNYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLS 1593
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
NDD++GIQ++YG
Sbjct: 1594 NDDIKGIQELYGPSPDADTDTGTGPTPTL---------------------------GPVT 1692
Query: 340 PNIC--DGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 397
P IC D F+ +A +R E+F FKD++ WR R P+ + FW LP IDAVYE
Sbjct: 1693 PEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEKIDAVYE 1872
Query: 398 N-SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP--HGIDSAIWWEDVGKTYFF 454
+ VFF GN+YWV+ +TL+ GYP L +L G+PP +D+A W KTY F
Sbjct: 1873 APQEEKAVFFAGNEYWVYSASTLERGYPKPLTSL--GLPPDVQQVDAAFNWSKNKKTYIF 2046
Query: 455 KGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQ 513
GD++WRY+E K MDPG+PK I W IP++ + G +YF+KG Y K NQ
Sbjct: 2047 SGDKFWRYNEVKKKMDPGFPKLIADSWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQ 2226
Query: 514 ILK-VEPGYPRSILKDFMGC 532
LK V+ G SI D++GC
Sbjct: 2227 SLKSVKFG---SIKSDWLGC 2277
Score = 134 bits (337), Expect = 3e-29
Identities = 75/164 (45%), Positives = 97/164 (58%), Gaps = 1/164 (0%)
Frame = +1
Query: 69 MQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ L MQ+F+G+ TG +D+NTI+ M+KPRCG PD + +N ++ KW
Sbjct: 499 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 651
Query: 129 HKHITYSIKNVTPKVGDPET-RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
ITY I TP + DPET A RA VW +VTPL F S + +G + DI I
Sbjct: 652 KNQITYRIIGYTPDL-DPETVDDAFARALKVWSDVTPLRF-----SRIHDG--EADIMIN 807
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
F HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 808 FGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 939
>ref|NM_031054.1| Rattus norvegicus matrix metalloproteinase 2 (72 KDa type IV
collagenase) (Mmp2), mRNA
Length = 3231
Score = 204 bits (520), Expect = 2e-50
Identities = 126/320 (39%), Positives = 165/320 (51%), Gaps = 7/320 (2%)
Frame = +3
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
T++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1608 TNYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLS 1775
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
+DD++GIQ++YG
Sbjct: 1776 HDDIKGIQELYGPSPDADTDTGTGPTPTL---------------------------GPVT 1874
Query: 340 PNIC--DGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 397
P IC D F+ +A +R E+F FKD++ WR R P+ + FW LP IDAVYE
Sbjct: 1875 PEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEKIDAVYE 2054
Query: 398 N-SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP--HGIDSAIWWEDVGKTYFF 454
+ VFF GN+YWV+ +TL+ GYP L +L G+PP +D+A W KTY F
Sbjct: 2055 APQEEKAVFFAGNEYWVYSASTLERGYPKPLTSL--GLPPDVQQVDAAFNWSKNKKTYIF 2228
Query: 455 KGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQ 513
GD++WRY+E K MDPG+PK I W IP++ + G +YF+KG Y K NQ
Sbjct: 2229 AGDKFWRYNEVKKKMDPGFPKLIADSWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQ 2408
Query: 514 ILK-VEPGYPRSILKDFMGC 532
LK V+ G SI D++GC
Sbjct: 2409 SLKSVKFG---SIKSDWLGC 2459
Score = 134 bits (337), Expect = 3e-29
Identities = 75/164 (45%), Positives = 97/164 (58%), Gaps = 1/164 (0%)
Frame = +3
Query: 69 MQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ L MQ+F+G+ TG +D+NTI+ M+KPRCG PD + +N ++ KW
Sbjct: 681 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 833
Query: 129 HKHITYSIKNVTPKVGDPET-RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
ITY I TP + DPET A RA VW +VTPL F S + +G + DI I
Sbjct: 834 KNQITYRIIGYTPDL-DPETVDDAFARALKVWSDVTPLRF-----SRIHDG--EADIMIN 989
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
F HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 990 FGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 1121
>emb|X71466.1|RNCOLL R. Norvegicus mRNA for 72 KDa type IV collagenase
Length = 3231
Score = 204 bits (520), Expect = 2e-50
Identities = 126/320 (39%), Positives = 165/320 (51%), Gaps = 7/320 (2%)
Frame = +3
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
T++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1608 TNYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLS 1775
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
+DD++GIQ++YG
Sbjct: 1776 HDDIKGIQELYGPSPDADTDTGTGPTPTL---------------------------GPVT 1874
Query: 340 PNIC--DGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 397
P IC D F+ +A +R E+F FKD++ WR R P+ + FW LP IDAVYE
Sbjct: 1875 PEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEKIDAVYE 2054
Query: 398 N-SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP--HGIDSAIWWEDVGKTYFF 454
+ VFF GN+YWV+ +TL+ GYP L +L G+PP +D+A W KTY F
Sbjct: 2055 APQEEKAVFFAGNEYWVYSASTLERGYPKPLTSL--GLPPDVQQVDAAFNWSKNKKTYIF 2228
Query: 455 KGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQ 513
GD++WRY+E K MDPG+PK I W IP++ + G +YF+KG Y K NQ
Sbjct: 2229 AGDKFWRYNEVKKKMDPGFPKLIADSWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQ 2408
Query: 514 ILK-VEPGYPRSILKDFMGC 532
LK V+ G SI D++GC
Sbjct: 2409 SLKSVKFG---SIKSDWLGC 2459
Score = 134 bits (337), Expect = 3e-29
Identities = 75/164 (45%), Positives = 97/164 (58%), Gaps = 1/164 (0%)
Frame = +3
Query: 69 MQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ L MQ+F+G+ TG +D+NTI+ M+KPRCG PD + +N ++ KW
Sbjct: 681 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 833
Query: 129 HKHITYSIKNVTPKVGDPET-RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
ITY I TP + DPET A RA VW +VTPL F S + +G + DI I
Sbjct: 834 KNQITYRIIGYTPDL-DPETVDDAFARALKVWSDVTPLRF-----SRIHDG--EADIMIN 989
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
F HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 990 FGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 1121
>ref|NM_008610.1| Mus musculus matrix metalloproteinase 2 (Mmp2), mRNA
Length = 2800
Score = 204 bits (520), Expect = 2e-50
Identities = 126/320 (39%), Positives = 165/320 (51%), Gaps = 7/320 (2%)
Frame = +2
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
T++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1178 TNYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLS 1345
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
+DD++GIQ++YG
Sbjct: 1346 HDDIKGIQELYGPSPDADTDTGTGPTPTL---------------------------GPVT 1444
Query: 340 PNIC--DGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 397
P IC D F+ +A +R E+F FKD++ WR R P+ + FW LP IDAVYE
Sbjct: 1445 PEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEKIDAVYE 1624
Query: 398 N-SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP--HGIDSAIWWEDVGKTYFF 454
+ VFF GN+YWV+ +TL+ GYP L +L G+PP +D+A W KTY F
Sbjct: 1625 APQEEKAVFFAGNEYWVYSASTLERGYPKPLTSL--GLPPDVQQVDAAFNWSKNKKTYIF 1798
Query: 455 KGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQ 513
GD++WRY+E K MDPG+PK I W IP++ + G +YF+KG Y K NQ
Sbjct: 1799 AGDKFWRYNEVKKKMDPGFPKLIADSWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQ 1978
Query: 514 ILK-VEPGYPRSILKDFMGC 532
LK V+ G SI D++GC
Sbjct: 1979 SLKSVKFG---SIKSDWLGC 2029
Score = 134 bits (337), Expect = 3e-29
Identities = 75/164 (45%), Positives = 97/164 (58%), Gaps = 1/164 (0%)
Frame = +2
Query: 69 MQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ L MQ+F+G+ TG +D+NTI+ M+KPRCG PD + +N ++ KW
Sbjct: 251 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 403
Query: 129 HKHITYSIKNVTPKVGDPET-RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
ITY I TP + DPET A RA VW +VTPL F S + +G + DI I
Sbjct: 404 KNQITYRIIGYTPDL-DPETVDDAFARALKVWSDVTPLRF-----SRIHDG--EADIMIN 559
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
F HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 560 FGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 691
>gb|M84324.1|MUSIVCOL Mus musculus type IV collagenase mRNA, complete cds
Length = 2800
Score = 204 bits (520), Expect = 2e-50
Identities = 126/320 (39%), Positives = 165/320 (51%), Gaps = 7/320 (2%)
Frame = +2
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
T++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1178 TNYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLS 1345
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
+DD++GIQ++YG
Sbjct: 1346 HDDIKGIQELYGPSPDADTDTGTGPTPTL---------------------------GPVT 1444
Query: 340 PNIC--DGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 397
P IC D F+ +A +R E+F FKD++ WR R P+ + FW LP IDAVYE
Sbjct: 1445 PEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEKIDAVYE 1624
Query: 398 N-SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP--HGIDSAIWWEDVGKTYFF 454
+ VFF GN+YWV+ +TL+ GYP L +L G+PP +D+A W KTY F
Sbjct: 1625 APQEEKAVFFAGNEYWVYSASTLERGYPKPLTSL--GLPPDVQQVDAAFNWSKNKKTYIF 1798
Query: 455 KGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQ 513
GD++WRY+E K MDPG+PK I W IP++ + G +YF+KG Y K NQ
Sbjct: 1799 AGDKFWRYNEVKKKMDPGFPKLIADSWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQ 1978
Query: 514 ILK-VEPGYPRSILKDFMGC 532
LK V+ G SI D++GC
Sbjct: 1979 SLKSVKFG---SIKSDWLGC 2029
Score = 134 bits (337), Expect = 3e-29
Identities = 75/164 (45%), Positives = 97/164 (58%), Gaps = 1/164 (0%)
Frame = +2
Query: 69 MQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ L MQ+F+G+ TG +D+NTI+ M+KPRCG PD + +N ++ KW
Sbjct: 251 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 403
Query: 129 HKHITYSIKNVTPKVGDPET-RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
ITY I TP + DPET A RA VW +VTPL F S + +G + DI I
Sbjct: 404 KNQITYRIIGYTPDL-DPETVDDAFARALKVWSDVTPLRF-----SRIHDG--EADIMIN 559
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
F HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 560 FGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 691
>gb|AF290428.1|AF290428 Bos taurus matrix metalloprotease 2 mRNA, complete cds
Length = 2350
Score = 204 bits (519), Expect = 2e-50
Identities = 124/320 (38%), Positives = 166/320 (51%), Gaps = 7/320 (2%)
Frame = +2
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
+++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1319 SNYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLS 1486
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
+DD+QGIQ++YG
Sbjct: 1487 HDDIQGIQELYGASPDIDTGTGPTPTLGP-----------------------------VT 1579
Query: 340 PNIC--DGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 397
P +C D F+ ++ +R E+F FKD++ WR R P+ + FW LP IDAVYE
Sbjct: 1580 PELCKQDIVFDGISQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEKIDAVYE 1759
Query: 398 N-SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP--HGIDSAIWWEDVGKTYFF 454
+ + VFF GN+YWV+ +TL+ GYP L +L G+PP +D+A W KTY F
Sbjct: 1760 DPQEEKAVFFAGNEYWVYSASTLERGYPKPLTSL--GLPPGVQKVDAAFNWSKNKKTYIF 1933
Query: 455 KGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQ 513
GD++WRY+E K MDPG+PK I W IP++ + G +YF+KG Y K NQ
Sbjct: 1934 AGDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQ 2113
Query: 514 ILK-VEPGYPRSILKDFMGC 532
LK V+ G SI D++GC
Sbjct: 2114 SLKSVKFG---SIKSDWLGC 2164
Score = 132 bits (332), Expect = 1e-28
Identities = 71/163 (43%), Positives = 95/163 (57%)
Frame = +2
Query: 69 MQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ L MQ+F+G+ TG++D++TI+ M+KPRCG PD + +N ++ KW
Sbjct: 392 LKDTLKKMQKFFGLPQTGELDQSTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 544
Query: 129 HKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIF 188
ITY I TP + A RAF VW +VTPL F S + +G + DI I F
Sbjct: 545 KNQITYRIIGYTPDLDPQTVDDAFARAFQVWSDVTPLRF-----SRIHDG--EADIMINF 703
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PGPG+GGD+HFD DE TLG
Sbjct: 704 GRWEHGDGYPFDGKDGLLAHAFAPGPGVGGDSHFDDDELRTLG 832
>ref|XM_012503.2| Homo sapiens matrix metalloproteinase 2 (gelatinase A, 72kD
gelatinase, 72kD type IV collagenase) (MMP2), mRNA
Length = 3069
Score = 203 bits (517), Expect = 4e-50
Identities = 137/381 (35%), Positives = 185/381 (47%), Gaps = 7/381 (1%)
Frame = +2
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1427 NYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLSQ 1594
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD++GIQ++YG P
Sbjct: 1595 DDIKGIQELYGASPDIDLGTGPTPTLGP-----------------------------VTP 1687
Query: 341 NIC--DGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYEN 398
IC D F+ +A +R E+F FKD++ WR R P+ + FW LP IDAVYE
Sbjct: 1688 EICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVYEA 1867
Query: 399 -SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP--HGIDSAIWWEDVGKTYFFK 455
+ VFF GN+YW++ +TL+ GYP L +L G+PP +D+A W KTY F
Sbjct: 1868 PQEEKAVFFAGNEYWIYSASTLERGYPKPLTSL--GLPPDVQRVDAAFNWSKNKKTYIFA 2041
Query: 456 GDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
GD++WRY+E K MDPG+PK I W IP++ + G +YF+KG Y K NQ
Sbjct: 2042 GDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQS 2221
Query: 515 LK-VEPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCIL 573
LK V+ G SI D++GC + LS D L+N T + +A +P L
Sbjct: 2222 LKSVKFG---SIKSDWLGC*AGPGSHRPFLSTAFDTP---GLEN*RRTRRGLA-AVPSAL 2380
Query: 574 ALCLLVLVYTVFQFKRKGTPR 594
L ++ F+ G+ R
Sbjct: 2381 QLISILTPTW*FKIPESGSSR 2443
Score = 137 bits (344), Expect = 4e-30
Identities = 76/164 (46%), Positives = 98/164 (59%), Gaps = 1/164 (0%)
Frame = +2
Query: 69 MQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ L MQ+F+G+ TG +D+NTI+ M+KPRCG PD + +N ++ KW
Sbjct: 497 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 649
Query: 129 HKHITYSIKNVTPKVGDPET-RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
ITY I TP + DPET A RAF VW +VTPL F S + +G + DI I
Sbjct: 650 KNQITYRIIGYTPDL-DPETVDDAFARAFQVWSDVTPLRF-----SRIHDG--EADIMIN 805
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
F HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 806 FGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 937
>ref|NM_004530.1| Homo sapiens matrix metalloproteinase 2 (gelatinase A, 72kD
gelatinase, 72kD type IV collagenase) (MMP2), mRNA
Length = 3069
Score = 203 bits (517), Expect = 4e-50
Identities = 137/381 (35%), Positives = 185/381 (47%), Gaps = 7/381 (1%)
Frame = +2
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1427 NYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLSQ 1594
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD++GIQ++YG P
Sbjct: 1595 DDIKGIQELYGASPDIDLGTGPTPTLGP-----------------------------VTP 1687
Query: 341 NIC--DGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYEN 398
IC D F+ +A +R E+F FKD++ WR R P+ + FW LP IDAVYE
Sbjct: 1688 EICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVYEA 1867
Query: 399 -SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP--HGIDSAIWWEDVGKTYFFK 455
+ VFF GN+YW++ +TL+ GYP L +L G+PP +D+A W KTY F
Sbjct: 1868 PQEEKAVFFAGNEYWIYSASTLERGYPKPLTSL--GLPPDVQRVDAAFNWSKNKKTYIFA 2041
Query: 456 GDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
GD++WRY+E K MDPG+PK I W IP++ + G +YF+KG Y K NQ
Sbjct: 2042 GDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQS 2221
Query: 515 LK-VEPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCIL 573
LK V+ G SI D++GC + LS D L+N T + +A +P L
Sbjct: 2222 LKSVKFG---SIKSDWLGC*AGPGSHRPFLSTAFDTP---GLEN*RRTRRGLA-AVPSAL 2380
Query: 574 ALCLLVLVYTVFQFKRKGTPR 594
L ++ F+ G+ R
Sbjct: 2381 QLISILTPTW*FKIPESGSSR 2443
Score = 137 bits (344), Expect = 4e-30
Identities = 76/164 (46%), Positives = 98/164 (59%), Gaps = 1/164 (0%)
Frame = +2
Query: 69 MQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ L MQ+F+G+ TG +D+NTI+ M+KPRCG PD + +N ++ KW
Sbjct: 497 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 649
Query: 129 HKHITYSIKNVTPKVGDPET-RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
ITY I TP + DPET A RAF VW +VTPL F S + +G + DI I
Sbjct: 650 KNQITYRIIGYTPDL-DPETVDDAFARAFQVWSDVTPLRF-----SRIHDG--EADIMIN 805
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
F HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 806 FGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 937
>gb|J03210.1|HUMCN4GEL Human collagenase type IV mRNA, 3' end
Length = 2733
Score = 203 bits (517), Expect = 4e-50
Identities = 137/381 (35%), Positives = 185/381 (47%), Gaps = 7/381 (1%)
Frame = +2
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1091 NYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLSQ 1258
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD++GIQ++YG P
Sbjct: 1259 DDIKGIQELYGASPDIDLGTGPTPTLGP-----------------------------VTP 1351
Query: 341 NIC--DGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYEN 398
IC D F+ +A +R E+F FKD++ WR R P+ + FW LP IDAVYE
Sbjct: 1352 EICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVYEA 1531
Query: 399 -SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP--HGIDSAIWWEDVGKTYFFK 455
+ VFF GN+YW++ +TL+ GYP L +L G+PP +D+A W KTY F
Sbjct: 1532 PQEEKAVFFAGNEYWIYSASTLERGYPKPLTSL--GLPPDVQRVDAAFNWSKNKKTYIFA 1705
Query: 456 GDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
GD++WRY+E K MDPG+PK I W IP++ + G +YF+KG Y K NQ
Sbjct: 1706 GDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQS 1885
Query: 515 LK-VEPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCIL 573
LK V+ G SI D++GC + LS D L+N T + +A +P L
Sbjct: 1886 LKSVKFG---SIKSDWLGC*AGPGSHRPFLSTAFDTP---GLEN*RRTRRGLA-AVPSAL 2044
Query: 574 ALCLLVLVYTVFQFKRKGTPR 594
L ++ F+ G+ R
Sbjct: 2045 QLISILTPTW*FKIPESGSSR 2107
Score = 137 bits (344), Expect = 4e-30
Identities = 76/164 (46%), Positives = 98/164 (59%), Gaps = 1/164 (0%)
Frame = +2
Query: 69 MQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ L MQ+F+G+ TG +D+NTI+ M+KPRCG PD + +N ++ KW
Sbjct: 161 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 313
Query: 129 HKHITYSIKNVTPKVGDPET-RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
ITY I TP + DPET A RAF VW +VTPL F S + +G + DI I
Sbjct: 314 KNQITYRIIGYTPDL-DPETVDDAFARAFQVWSDVTPLRF-----SRIHDG--EADIMIN 469
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
F HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 470 FGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 601
>gb|BC002576.1|BC002576 Homo sapiens, matrix metalloproteinase 2 (gelatinase A, 72kD
gelatinase, 72kD type IV collagenase), clone MGC:2313
IMAGE:3161383, mRNA, complete cds
Length = 3074
Score = 203 bits (517), Expect = 4e-50
Identities = 137/381 (35%), Positives = 185/381 (47%), Gaps = 7/381 (1%)
Frame = +3
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1413 NYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLSQ 1580
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD++GIQ++YG P
Sbjct: 1581 DDIKGIQELYGASPDIDLGTGPTPTLGP-----------------------------VTP 1673
Query: 341 NIC--DGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYEN 398
IC D F+ +A +R E+F FKD++ WR R P+ + FW LP IDAVYE
Sbjct: 1674 EICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVYEA 1853
Query: 399 -SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP--HGIDSAIWWEDVGKTYFFK 455
+ VFF GN+YW++ +TL+ GYP L +L G+PP +D+A W KTY F
Sbjct: 1854 PQEEKAVFFAGNEYWIYSASTLERGYPKPLTSL--GLPPDVQRVDAAFNWSKNKKTYIFA 2027
Query: 456 GDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
GD++WRY+E K MDPG+PK I W IP++ + G +YF+KG Y K NQ
Sbjct: 2028 GDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQS 2207
Query: 515 LK-VEPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTASTVKAIAIVIPCIL 573
LK V+ G SI D++GC + LS D L+N T + +A +P L
Sbjct: 2208 LKSVKFG---SIKSDWLGC*AGPGSHRPFLSTAFDTP---GLEN*RRTRRGLA-AVPSAL 2366
Query: 574 ALCLLVLVYTVFQFKRKGTPR 594
L ++ F+ G+ R
Sbjct: 2367 QLISILTPTW*FKIPESGSSR 2429
Score = 137 bits (344), Expect = 4e-30
Identities = 76/164 (46%), Positives = 98/164 (59%), Gaps = 1/164 (0%)
Frame = +3
Query: 69 MQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ L MQ+F+G+ TG +D+NTI+ M+KPRCG PD + +N ++ KW
Sbjct: 483 LKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 635
Query: 129 HKHITYSIKNVTPKVGDPET-RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
ITY I TP + DPET A RAF VW +VTPL F S + +G + DI I
Sbjct: 636 KNQITYRIIGYTPDL-DPETVDDAFARAFQVWSDVTPLRF-----SRIHDG--EADIMIN 791
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
F HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 792 FGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 923
>gb|AF177217.1|AF177217 Canis familiaris matrix metalloproteinase-2 (MMP-2) mRNA, partial cds
Length = 2522
Score = 202 bits (513), Expect = 1e-49
Identities = 124/319 (38%), Positives = 164/319 (50%), Gaps = 7/319 (2%)
Frame = +3
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1056 NYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSEDPGALMAPIYTY--TKNFRLSQ 1223
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD++GIQ++YG P
Sbjct: 1224 DDIKGIQELYGASPDAGTGTGPTPTLGP-----------------------------VTP 1316
Query: 341 NIC--DGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYEN 398
IC D F+ ++ +R E+F FKD++ WR R P+ + FW LP IDAVYE
Sbjct: 1317 EICKQDIVFDGISQIRGEIFFFKDRFIWRTVTPRNKPMGPLLVATFWPELPEKIDAVYEA 1496
Query: 399 -SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP--HGIDSAIWWEDVGKTYFFK 455
+ VFF GN+YWV+ +TL+ GYP L +L G+PP +D+A W KTY F
Sbjct: 1497 PQEEKAVFFAGNEYWVYSASTLERGYPKPLTSL--GLPPDVQRVDAAFNWSKNKKTYIFA 1670
Query: 456 GDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
GD++WRY+E K MDPG+PK I W IP++ + +G +YF+KG Y K NQ
Sbjct: 1671 GDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGSGHSYFFKGAYYLKLENQS 1850
Query: 515 LK-VEPGYPRSILKDFMGC 532
LK V+ G SI D++GC
Sbjct: 1851 LKSVKFG---SIKSDWLGC 1898
Score = 139 bits (349), Expect = 1e-30
Identities = 76/164 (46%), Positives = 100/164 (60%), Gaps = 1/164 (0%)
Frame = +3
Query: 69 MQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ L MQ+F+G+ TG++D++TI+ M+KPRCG PD + +N ++ KW
Sbjct: 126 LKDTLKKMQKFFGLPQTGELDQSTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 278
Query: 129 HKHITYSIKNVTPKVGDPET-RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
ITY I TP + DPET A RAF VW +VTPL F S + +G + DI I
Sbjct: 279 KNQITYRIIGYTPDL-DPETVDDAFARAFQVWSDVTPLRF-----SRIHDG--EADIMIN 434
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
F HGD PFDG+ G LAHA+ PGPG+GGD+HFD DE WTLG
Sbjct: 435 FGRWEHGDGYPFDGKDGLLAHAFAPGPGVGGDSHFDDDELWTLG 566
>dbj|D63579.1|RABMM2 Oryctolagus cuniculus mRNA for matrix metalloproteinase-2, complete
cds
Length = 2678
Score = 201 bits (511), Expect = 2e-49
Identities = 124/320 (38%), Positives = 163/320 (50%), Gaps = 7/320 (2%)
Frame = +1
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
T++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 1135 TNYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLS 1302
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
DD++GIQ++YG
Sbjct: 1303 QDDIKGIQELYGASPDAGTDAGTGPTPTL---------------------------GPVT 1401
Query: 340 PNIC--DGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 397
P IC D F+ +A +R E+F FKD++ WR P+ + FW LP IDAVYE
Sbjct: 1402 PEICTQDIVFDGIAQIRGEIFFFKDRFIWRTVTPGDKPMGPLLVATFWPELPEKIDAVYE 1581
Query: 398 N-SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP--HGIDSAIWWEDVGKTYFF 454
+ VFF GN+YWV+ +TL+ GYP L +L G+PP +D+A W KTY F
Sbjct: 1582 APQEEKAVFFAGNEYWVYSASTLERGYPKPLTSL--GLPPDVQRVDAAFNWSKNKKTYIF 1755
Query: 455 KGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQ 513
GD++WRY+E K MDPG+P+ I W IP+ + +G +YF+KG Y K NQ
Sbjct: 1756 AGDKFWRYNEVKKKMDPGFPRLIADAWNAIPDHLDAVVDLQGSGHSYFFKGTYYLKLENQ 1935
Query: 514 ILK-VEPGYPRSILKDFMGC 532
LK V+ G SI D++GC
Sbjct: 1936 SLKSVKVG---SIKTDWLGC 1986
Score = 137 bits (346), Expect = 2e-30
Identities = 76/164 (46%), Positives = 99/164 (60%), Gaps = 1/164 (0%)
Frame = +1
Query: 69 MQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ L MQ+F+G+ TG++D++TI+ M+KPRCG PD + +N ++ KW
Sbjct: 208 LKDTLKKMQKFFGLPQTGELDQSTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 360
Query: 129 HKHITYSIKNVTPKVGDPET-RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
ITY I TP + DPET A RAF VW NVTPL F S + +G + DI I
Sbjct: 361 KNQITYRIIGYTPDL-DPETVDDAFARAFQVWSNVTPLRF-----SRIHDG--EADIMIN 516
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
F HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 517 FGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLG 648
>gb|AF097638.1|AF097638 Canis familiaris matrix metalloproteinase-14 (MMP-14) mRNA, partial
cds
Length = 445
Score = 197 bits (502), Expect = 2e-48
Identities = 83/147 (56%), Positives = 112/147 (75%)
Frame = +3
Query: 396 YENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFK 455
YE DG FVFFKG+K+WVF + +L+PGYP + LG G+P ID+A++W GKTYFF+
Sbjct: 3 YERKDGKFVFFKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFR 182
Query: 456 GDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQIL 515
G++Y+R++EE++ +D YPK I +W+GIPESP+G+F+ + FTYFYKG +YWKFNNQ L
Sbjct: 183 GNKYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGNKYWKFNNQKL 362
Query: 516 KVEPGYPRSILKDFMGCDGPTDRDKEG 542
KVEPGYP+S L+D+MGC R EG
Sbjct: 363 KVEPGYPKSALRDWMGCPSSGSRPDEG 443
Score = 71.2 bits (173), Expect = 3e-10
Identities = 46/132 (34%), Positives = 69/132 (51%), Gaps = 5/132 (3%)
Frame = +3
Query: 360 FKDQWFWRVRNNRVMDGYPMQITYFWRGLPPS-IDA-VYENSDGNFVFFKGNKYWVFKD- 416
FK W + GYP I RGLP IDA ++ +G FF+GNKY+ F +
Sbjct: 33 FKGDKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNKYYRFNEE 212
Query: 417 -TTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPK 475
+ YP + I + GIP S + ++V TYF+KG++YW+++ + ++PGYPK
Sbjct: 213 LRAVDSEYPKN-IKVWEGIPESPRGSFMGSDEV-FTYFYKGNKYWKFNNQKLKVEPGYPK 386
Query: 476 -PITIWKGIPES 486
+ W G P S
Sbjct: 387 SALRDWMGCPSS 422
>gb|AF295805.1|AF295805 Sus scrofa gelatinase A (MMP-2) mRNA, complete cds
Length = 2857
Score = 195 bits (495), Expect = 1e-47
Identities = 123/319 (38%), Positives = 161/319 (49%), Gaps = 7/319 (2%)
Frame = +1
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L +
Sbjct: 1189 NYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSEDPGALMAPIYTY--TKNFRLSH 1356
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD++GIQ++YG P
Sbjct: 1357 DDVKGIQELYGASPDIDTGTGPTPTLGP-----------------------------VTP 1449
Query: 341 NIC--DGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYEN 398
IC D F+ ++ +R E+F FKD++ WR R FW LP IDAVYE
Sbjct: 1450 EICKQDIVFDGISQIRGEIFFFKDRFIWRTVTPRDKPMVAPAGATFWPELPEKIDAVYEA 1629
Query: 399 -SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP--HGIDSAIWWEDVGKTYFFK 455
+ VFF GN+YWV+ +TL+ GYP L +L G+PP +D+A W KTY F
Sbjct: 1630 PQEEKAVFFAGNEYWVYSASTLERGYPKPLTSL--GLPPDVQKVDAAFNWSKNKKTYIFA 1803
Query: 456 GDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQI 514
GD++WRY+E K MDPG+PK I W IP++ + G +YF+KG Y K NQ
Sbjct: 1804 GDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQS 1983
Query: 515 LK-VEPGYPRSILKDFMGC 532
LK V+ G SI D++GC
Sbjct: 1984 LKSVKFG---SIKSDWLGC 2031
Score = 137 bits (346), Expect = 2e-30
Identities = 76/164 (46%), Positives = 100/164 (60%), Gaps = 1/164 (0%)
Frame = +1
Query: 69 MQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ L MQ+F+G+ TG++D++TI+ M+KPRCG PD + +N ++ KW
Sbjct: 259 LKDTLKKMQKFFGLPQTGELDQSTIETMRKPRCGNPDV----ANYNFFPRK-----PKWD 411
Query: 129 HKHITYSIKNVTPKVGDPET-RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
ITY I TP + DPET A RAF VW +VTPL F S + +G + DI I
Sbjct: 412 KTQITYRIIGYTPDL-DPETVDDAFARAFRVWSDVTPLRF-----SRIHDG--EADIMIN 567
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
F HGD PFDG+ G LAHA+ PGPG+GGD+HFD DE WTLG
Sbjct: 568 FGRWEHGDGYPFDGKDGLLAHAFAPGPGVGGDSHFDDDELWTLG 699
>emb|X02601.1|RNURFR1 Rat mRNA for 53 kD polypeptide induced by growth factors (EGF) and
oncogenes (H-ras; src; polyoma middle T)
Length = 1771
Score = 193 bits (491), Expect = 4e-47
Identities = 121/280 (43%), Positives = 150/280 (53%), Gaps = 11/280 (3%)
Frame = +1
Query: 23 LQTLLWILCATVC------GTEQYFNVEV---WLQKYGYLPPTDPRMSVLRSAETMQSAL 73
L LLW LC VC G+E+ +EV +L+ Y L + + + + + +
Sbjct: 67 LPVLLW-LCTAVCSSYPLHGSEEDAGMEVLQKYLENYYGLEKDVKQFTKKKDSSPVVKKI 243
Query: 74 AAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHIT 133
MQ+F G+ MTGK+D NT++ M KPRCGVPD G S F KW+ HI+
Sbjct: 244 QEMQKFLGLKMTGKLDSNTMELMHKPRCGVPD-VGGFSTFP--------GSPKWRKNHIS 396
Query: 134 YSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFH 193
Y I N T + AI RA VW+ VTPLTF + E DI I FA H
Sbjct: 397 YRIVNYTLDLPRESVDSAIERALKVWEEVTPLTFSRISEGE-------ADIMISFAVEEH 555
Query: 194 GDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALG 253
GD PFDG G LAHAY PGPG GD HFD DE WT + G +LFLVA HELGH+LG
Sbjct: 556 GDFIPFDGPGMVLAHAYAPGPGTNGDAHFDDDERWT---DDVTGTNLFLVAAHELGHSLG 726
Query: 254 LEHSNDPTAIMAPFYQYMETD--NFKLPNDDLQGIQKIYG 291
L HS + A+M P Y+ TD F L DD+ GIQ +YG
Sbjct: 727 LFHSANAEALMYPVYK-SSTDLARFHLSQDDVDGIQSLYG 843
Score = 104 bits (259), Expect = 3e-20
Identities = 62/174 (35%), Positives = 94/174 (53%), Gaps = 2/174 (1%)
Frame = +1
Query: 346 NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVF 405
+F+ ++ LR E+ FKD+ FWR G+ + I+ FW LP ++DA YE ++ + VF
Sbjct: 934 SFDAVSTLRGEVLFFKDRHFWRKSLRTPEPGFYL-ISSFWPSLPSNMDAAYEVTNRDTVF 1110
Query: 406 F-KGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSE 464
KGN+ W + GYP + TLG ID+AI +D KTYFF D++WR+ E
Sbjct: 1111 ILKGNQIWAIRGHEELAGYPKSIHTLGLPETVQKIDAAISLKDQKKTYFFVEDKFWRFDE 1290
Query: 465 EMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
+ ++MDP +P+ I + GI F + GF YF+ G +F+ KV
Sbjct: 1291 KKQSMDPEFPRKIAENFPGIGTKVDAVF--EAFGFLYFFSGSSQLEFDPNAGKV 1446
Score = 57.0 bits (136), Expect = 5e-06
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
Frame = +1
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGK 450
S DAV G +FFK +W T +PG+ LI+ P +D+A +
Sbjct: 934 SFDAV-STLRGEVLFFKDRHFWRKSLRTPEPGFY--LISSFWPSLPSNMDAAYEVTNRDT 1104
Query: 451 TYFFKGDRYW--RYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGK 505
+ KG++ W R EE+ GYPK I G+PE+ Q A K+ TYF+
Sbjct: 1105 VFILKGNQIWAIRGHEELA----GYPKSIHTL-GLPETVQKIDAAISLKDQKKTYFFVED 1269
Query: 506 EYWKFNNQILKVEPGYPRSILKDFMGCDGPTD 537
++W+F+ + ++P +PR I ++F G D
Sbjct: 1270 KFWRFDEKKQSMDPEFPRKIAENFPGIGTKVD 1365
>gb|AY037943.1| Xenopus laevis matrix metalloproteinase mRNA, complete cds
Length = 2829
Score = 192 bits (488), Expect = 8e-47
Identities = 112/304 (36%), Positives = 156/304 (50%), Gaps = 6/304 (1%)
Frame = +2
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
+++D D W G G LFLVA HE GHALGLEHS DP A+MAP Y Y++ NF+L
Sbjct: 1238 SNYDDDRKW--GFCPDQGYSLFLVAAHEFGHALGLEHSQDPGALMAPIYTYIK--NFRLS 1405
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
DD+ GIQ++YG
Sbjct: 1406 QDDITGIQELYGQGSKEKPGPGPIPTMGP-----------------------------VT 1498
Query: 340 PNIC--DGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 397
P++C D + ++ +R E F FKD++ WR N R P+ I FW LP IDAVYE
Sbjct: 1499 PDLCSKDVVLDGMSQIRGETFFFKDRFIWRTPNIRNKPSGPLLIATFWPELPDKIDAVYE 1678
Query: 398 N-SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPH--GIDSAIWWEDVGKTYFF 454
+ VFF GN+YWV+ +TL+ GYP L +LG +PP +D+A W KTYFF
Sbjct: 1679 EPQEEKTVFFAGNEYWVYSSSTLERGYPKKLTSLG--LPPDVDRVDAAFNWSKNKKTYFF 1852
Query: 455 KGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQ 513
GD++WRY+E K MD G+PK I W G+P++ +G++YF+K Y++ +
Sbjct: 1853 AGDKFWRYNEVKKKMDTGFPKLIADAWNGVPDNLDAVLDQTGSGYSYFFKDWYYFQVEGK 2032
Query: 514 ILKV 517
+K+
Sbjct: 2033 SVKI 2044
Score = 136 bits (343), Expect = 5e-30
Identities = 72/163 (44%), Positives = 91/163 (55%)
Frame = +2
Query: 69 MQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ AL MQ F+G+ TG+ D+NTI+ MKKPRCG PD + +N ++ KW
Sbjct: 311 LKDALKKMQSFFGLPETGEFDQNTIETMKKPRCGNPDV----ANYNFFPRK-----PKWD 463
Query: 129 HKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIF 188
H+TY I T + A RAF VW +VTPL F + E DI I F
Sbjct: 464 KNHLTYRILGYTTDLDSETVDDAFARAFKVWSDVTPLEFNRIHDGE-------ADIMINF 622
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PG G+GGD+HFD DE WTLG
Sbjct: 623 GRWEHGDGYPFDGKDGLLAHAFAPGSGVGGDSHFDDDELWTLG 751
Score = 66.6 bits (161), Expect = 7e-09
Identities = 50/163 (30%), Positives = 74/163 (44%), Gaps = 3/163 (1%)
Frame = +2
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
G FFK W + +P P + T +P ID+ KT FF G+ YW
Sbjct: 1550 GETFFFKDRFIWRTPNIRNKPSGPLLIATFWPELPDK-IDAVYEEPQEEKTVFFAGNEYW 1726
Query: 461 RYSEEMKTMDPGYPKPITIWKGIP---ESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
YS T++ GYPK +T G+P + AF +N TYF+ G ++W++N K+
Sbjct: 1727 VYSSS--TLERGYPKKLTSL-GLPPDVDRVDAAFNWSKNKKTYFFAGDKFWRYNEVKKKM 1897
Query: 518 EPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDNTAS 560
+ G+P+ I + G PD++D V LD T S
Sbjct: 1898 DTGFPKLIADAWNGV-------------PDNLDAV--LDQTGS 1981
>dbj|AB033754.2|AB033754 Oryzias latipes gel-a mRNA for gelatinase A, complete cds
Length = 3019
Score = 191 bits (486), Expect = 1e-46
Identities = 117/315 (37%), Positives = 157/315 (49%), Gaps = 4/315 (1%)
Frame = +1
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
+D D W G G LFLVA HE GHALGLEHS DP A+MAP Y + T +F+LP D
Sbjct: 1240 YDDDRKW--GFCPDQGYSLFLVAAHEFGHALGLEHSQDPGALMAPVYTF--TKDFRLPQD 1407
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPN 341
D+QGIQ++YG +
Sbjct: 1408 DIQGIQELYGVPTDKPLPPTQGPVTPM--------------------------------D 1491
Query: 342 ICDGN--FNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYEN- 398
IC + F+ +A +R E F FKD++ +R N R P+ + +W LP IDA YEN
Sbjct: 1492 ICKESIVFDAVAQIRGETFFFKDRFLFRSVNFRSKPKGPLLVATYWPDLPAKIDAAYENP 1671
Query: 399 SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
++ VFF GN++WV++ LQ GYP L L ID+A + KTY F GD+
Sbjct: 1672 AEEKTVFFAGNQFWVYRADELQSGYPRRLSNLDLPDDVQRIDAAFNFRRNRKTYLFSGDK 1851
Query: 459 YWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
+WRY E+ KTMDPG+PK I W GIP+ AF ++YF+KG Y+K + LK+
Sbjct: 1852 FWRYDEDRKTMDPGFPKLIADSWNGIPDDLDSAFSLNGIDYSYFFKGNHYFKLEDNTLKI 2031
Query: 518 EPGYPRSILKDFMGC 532
I D++GC
Sbjct: 2032 VK--LGEIKTDWLGC 2070
Score = 136 bits (343), Expect = 5e-30
Identities = 72/163 (44%), Positives = 92/163 (56%)
Frame = +1
Query: 69 MQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ L MQ+F+ + TG++D T+ MKKPRCGVPD + +N + KWQ
Sbjct: 307 LKDTLKTMQKFFTLPETGEIDAQTVAIMKKPRCGVPDV----ANYNFFHNK-----PKWQ 459
Query: 129 HKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIF 188
K ITY I +P + + A RAF VW +VTPL+F + E DI I F
Sbjct: 460 KKDITYRILGYSPDLDEEVINDAFYRAFKVWSDVTPLSFTRIMDGE-------ADIMINF 618
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PG GIGGD+HFD DE WTLG
Sbjct: 619 GRNEHGDGYPFDGKDGLLAHAFAPGGGIGGDSHFDDDEQWTLG 747
>dbj|AB021698.1|AB021698 Oncorhynchus mykiss mRNA for matrix metalloproteinase-2, complete cds
Length = 3035
Score = 191 bits (484), Expect = 2e-46
Identities = 118/321 (36%), Positives = 160/321 (49%), Gaps = 4/321 (1%)
Frame = +3
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
+D D W G G LFLVA HE GHALGLEHS DP A+MAP Y + T NF+L ND
Sbjct: 1260 YDDDRKW--GFCPDQGYSLFLVAAHEFGHALGLEHSQDPGALMAPMYTF--TKNFRLSND 1427
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPN 341
D++GIQ++YG +
Sbjct: 1428 DIKGIQELYGAGTDKPVPPTQGPVTPM--------------------------------D 1511
Query: 342 ICDGN--FNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
IC+ F+ +A +R E F FKD++ +R N R PM + +W LP +IDA YEN
Sbjct: 1512 ICNEPVVFDAVAQIRGETFFFKDRFIFRSTNFRGKPSGPMLVATYWPELPVTIDAAYENP 1691
Query: 400 -DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
+ VFF GN+ W+F ++ GYP + ++G GID+A + KTY F GD+
Sbjct: 1692 LEEKTVFFAGNEMWIFNADQIEKGYPKRISSIGLPTDLKGIDAAFSFGKSQKTYLFAGDQ 1871
Query: 459 YWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
+WRY+E K MD G+PK I W GIP+ AF +TYF+KG Y+K ++ LK+
Sbjct: 1872 FWRYNEAKKKMDLGFPKLIADSWNGIPDGIDSAFSLNGIDYTYFFKGAHYFKMDDSSLKI 2051
Query: 518 EPGYPRSILKDFMGCDGPTDR 538
I KD++GC T R
Sbjct: 2052 VK--LGEITKDWLGCH*ATVR 2108
Score = 137 bits (345), Expect = 3e-30
Identities = 72/163 (44%), Positives = 96/163 (58%)
Frame = +3
Query: 69 MQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ L MQ+F+ + TG++D T++ MKKPRCGVPD +++N ++ KWQ
Sbjct: 327 LKDTLKKMQKFFSLQETGEIDPKTVEIMKKPRCGVPDV----AQYNFFHRK-----PKWQ 479
Query: 129 HKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIF 188
ITY I +P + + A RAF VW +VTPL F + L +G + DI I F
Sbjct: 480 QNAITYRILGHSPDLDEETIDDAFLRAFKVWSDVTPLKF-----TRLMDG--EADIMINF 638
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLG 231
HGD PFDG+ G LAHA+ PGPG GGD+HFD DE WTLG
Sbjct: 639 GRNEHGDGYPFDGKDGLLAHAFAPGPGTGGDSHFDDDEQWTLG 767
>gb|U07775.1|GGU07775 Gallus gallus prepro-72kDa matrix metalloproteinase (MMP-2) mRNA,
complete cds
Length = 3073
Score = 190 bits (483), Expect = 3e-46
Identities = 118/317 (37%), Positives = 161/317 (50%), Gaps = 6/317 (1%)
Frame = +3
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
+D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L D
Sbjct: 1263 YDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSEDPGALMAPIYTY--TKNFRLSQD 1430
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPN 341
D++GIQ++Y ++ P
Sbjct: 1431 DIKGIQELYEVSPDVEPGPGPGPGPGPRPTLGPVT-----------------------PE 1541
Query: 342 IC--DGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYEN- 398
+C D F+ +A +R E+F FKD++ WR N R P+ + FW LP IDAVYE+
Sbjct: 1542 LCKHDIVFDGVAQIRGEIFFFKDRFMWRTVNPRGKPTGPLLVATFWPDLPEKIDAVYESP 1721
Query: 399 SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP--HGIDSAIWWEDVGKTYFFKG 456
D VFF GN+YWV+ + L GYP L +LG +PP ID+A W KTY F G
Sbjct: 1722 QDEKAVFFAGNEYWVYTASNLDRGYPKKLTSLG--LPPDVQRIDAAFNWGRNKKTYIFSG 1895
Query: 457 DRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQIL 515
DRYW+Y+EE K M+ PK I W G+P++ ++G+TYF+K + Y + ++ L
Sbjct: 1896 DRYWKYNEEKKKMELATPKFIADSWNGVPDNLDAVLGLTDSGYTYFFKDQYYLQMEDKSL 2075
Query: 516 KVEPGYPRSILKDFMGC 532
K+ I D++GC
Sbjct: 2076 KIVK--IGKISSDWLGC 2120
Score = 145 bits (366), Expect = 1e-32
Identities = 85/187 (45%), Positives = 106/187 (56%), Gaps = 1/187 (0%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+L KY P + + VL+ L MQ+F+G+ TG +D+NTI+ MKKPRCG PD
Sbjct: 279 YLNKYYGCPKDNCNLFVLKDT------LKKMQKFFGLPETGDLDQNTIETMKKPRCGNPD 440
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPET-RRAIRRAFDVWQNVTP 164
+ +N ++ KW+ HITY I TP + DPET A RAF VW +VTP
Sbjct: 441 V----ANYNFFPRK-----PKWEKNHITYRIIGYTPDL-DPETVDDAFARAFKVWSDVTP 590
Query: 165 LTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDS 224
L F + E DI I F HGD PFDG+ G LAHA+ PGPGIGGD+HFD
Sbjct: 591 LRFNRINDGE-------ADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGIGGDSHFDD 749
Query: 225 DEPWTLG 231
DE WTLG
Sbjct: 750 DELWTLG 770
>emb|X53598.1|PLHE6R P. lividus mRNA for hatching enzyme
Length = 2880
Score = 190 bits (483), Expect = 3e-46
Identities = 144/498 (28%), Positives = 223/498 (43%), Gaps = 15/498 (3%)
Frame = +1
Query: 42 NVEVW---LQKYGYLPPTDPRMSVLRSAE-TMQSALAAMQQFYGINMTGKVDRNTIDWMK 97
NVE+ L+K+GY PP S A SA+ Q+ GIN TG +D +T + +
Sbjct: 370 NVEILKAHLEKFGYTPPG----STFGEANLNYTSAILDFQEHGGINQTGILDADTAELLS 537
Query: 98 KPRCGVPDQTRGSSKFNIRRKRYALTGQKW-QHKHITYSIKNVTPKVGDPETRRAIRRAF 156
PRCGVPD + + W +++ +TYS +T + + + IRRAF
Sbjct: 538 TPRCGVPDVLP-----------FVTSSITWSRNQPVTYSFGALTSDLNQNDVKDEIRRAF 684
Query: 157 DVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGI 216
VW +V+ L+F EVP + VDI I F S HGD FDG GG LAHA+ P
Sbjct: 685 RVWDDVSGLSFREVPDTT------SVDIRIKFGSYDHGDGISFDGRGGVLAHAFLPR--- 837
Query: 217 GGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNF 276
GD HFD E WT G G +LF VA HE GH+LGL HS +A+M P+YQ NF
Sbjct: 838 NGDAHFDDSETWTEGT--RSGTNLFQVAAHEFGHSLGLYHSTVRSALMYPYYQGY-VPNF 1008
Query: 277 KLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXX 336
+L NDD+ GI+ +YG +
Sbjct: 1009RLDNDDIAGIRSLYGSNSGSGTTTTTRRPTTTRATTTRRTTTTRATTTRATTTTTTSPSR 1188
Query: 337 GAKP-NICDGNFNTLAILR---REMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSI 392
+ P C G+F+ A++R ++ +FW++ ++ + + F GLP +I
Sbjct: 1189PSPPRRACSGSFD--AVVRDSSNRIYALTGPYFWQL--DQPSPSWGLVSNRFGFGLPQNI 1356
Query: 393 DAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTY 452
DA ++ G +F Y+ ++ T+ Q +P + P ID A++ G TY
Sbjct: 1357DASFQR--GVVTYFFSECYYYYQ-TSTQRNFPRIPVNRKWVGLPCNID-AVYRSSRGPTY 1524
Query: 453 FFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQG---AFVHKENGFTYFYKGKEYWK 509
FFK ++++ + + +++ +P + A V + + +FY+ Y++
Sbjct: 1525FFKDSFVYKFNSNNRLQ--RRTRISSLFNDVPSALHDGVEAVVRADRNYIHFYRDGRYYR 1698
Query: 510 ---FNNQILKVEPGYPRS 524
+ Q + G P S
Sbjct: 1699MTDYGRQFVNFPNGLPYS 1752
>emb|AL121753.30|HSDJ614O4 Human DNA sequence from clone RP4-614O4 on chromosome 20q11.1-12
Contains the 3' part of the MMP24 gene for matrix
metalloproteinase 24 (membrane-inserted), the ITGB4BP gene
for integrin beta 4 binding protein, a novel gene similar
to a metalloproteina>
Length = 150481
Score = 187 bits (474), Expect = 3e-45
Identities = 83/103 (80%), Positives = 93/103 (89%)
Frame = +2
Query: 135 SIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHG 194
SI N TPKVG+ +TR+AIR+AFDVWQ VTPLTFEEVPY E+++ +++ DI I FASGFHG
Sbjct: 63923 SIHNYTPKVGELDTRKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHG 64102
Query: 195 DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDG 237
DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN NHDG
Sbjct: 64103 DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNANHDG 64231
Score = 149 bits (376), Expect = 8e-34
Identities = 62/97 (63%), Positives = 78/97 (79%)
Frame = +2
Query: 399 SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
+D + G+KYWVFK+ T++PGYPH L LG+ +P GID+A+ WE VGKTYFFKG+R
Sbjct: 81014 ADPGLLLATGDKYWVFKEVTVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTYFFKGER 81193
Query: 459 YWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKE 495
YWRYSEE + DPGYPKPIT+WKGIP++PQGAF+ KE
Sbjct: 81194 YWRYSEERRATDPGYPKPITVWKGIPQAPQGAFISKE 81304
Score = 145 bits (366), Expect = 1e-32
Identities = 65/111 (58%), Positives = 88/111 (78%), Gaps = 1/111 (0%)
Frame = +2
Query: 498 FTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGP-TDRDKEGLSPPDDVDIVIKLD 556
+TYFYKG++YWKF+NQ L VEPGYPR+IL+D+MGC+ +R KE P DDVDI++ ++
Sbjct: 83747 YTYFYKGRDYWKFDNQKLSVEPGYPRNILRDWMGCNQKEVERRKERRLPQDDVDIMVTIN 83926
Query: 557 NTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
+ +V A+A+VIPCIL+LC+LVLVYT+FQFK K P+ + Y KR +QEWV
Sbjct: 83927 DVPGSVNAVAVVIPCILSLCILVLVYTIFQFKNKTGPQPVTYYKRPVQEWV 84079
Score = 110 bits (274), Expect = 5e-22
Identities = 51/55 (92%), Positives = 53/55 (95%)
Frame = +2
Query: 237 GNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
GNDLFLVAVHELGHALGLEHS+DP+AIMAPFYQYMET NFKLP DDLQGIQKIYG
Sbjct: 73265 GNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHNFKLPQDDLQGIQKIYG 73429
Score = 87.4 bits (215), Expect = 4e-15
Identities = 43/88 (48%), Positives = 51/88 (57%)
Frame = +3
Query: 361 KDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQ 420
+D+WFWR+RNNRV +GYPMQI FW+GLP IDA YE +DG FVFFKGN Q
Sbjct: 79230 QDRWFWRLRNNRVQEGYPMQIEQFWKGLPARIDAAYERADGRFVFFKGNVDCAVGQFPAQ 79409
Query: 421 PGYPHDLITLGNGIPPHGIDSAIWWEDV 448
LG P ++ A W DV
Sbjct: 79410 --------GLGTSFFPSKLEEAGWEADV 79469
Score = 62.4 bits (150), Expect = 1e-07
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTID 94
WL+ YGYL P D R S L SA+ +QSA++ MQQFYGI +TG +D+ TI+
Sbjct: 56318 WLKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIE 56464
Score = 60.8 bits (146), Expect = 4e-07
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +1
Query: 95 WMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITY 134
WMKKPRCGVPD S + R KRYALTGQKW+ KHITY
Sbjct: 61381 WMKKPRCGVPDHPHLSRRR--RNKRYALTGQKWRQKHITY 61494
Score = 52.4 bits (124), Expect = 1e-04
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 456 GDRYWRYSEEMKTMDPGYPKPI-TIWKGIP-ESPQGAFVHKENGFTYFYKGKEYWKFNNQ 513
GD+YW + E T++PGYP + + +P E A + G TYF+KG+ YW+++ +
Sbjct: 81041 GDKYWVFKEV--TVEPGYPHSLGELGSCLPREGIDTALRWEPVGKTYFFKGERYWRYSEE 81214
Query: 514 ILKVEPGYPRSI 525
+PGYP+ I
Sbjct: 81215 RRATDPGYPKPI 81250
Score = 48.1 bits (113), Expect = 0.002
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +3
Query: 337 GAKPNICDGNFNTLAILRREMFVFK 361
G KPNICDGNFNT+A+ R EMFVFK
Sbjct: 76818 GTKPNICDGNFNTVALFRGEMFVFK 76892
>dbj|AB031323.1|AB031323 Sus scrofa mRNA for matrilysin, complete cds
Length = 968
Score = 186 bits (473), Expect = 4e-45
Identities = 101/248 (40%), Positives = 140/248 (55%), Gaps = 2/248 (0%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q GYL P S + A ++++ L MQ+F+ + +TG ++ + I M+KPRCGVPD
Sbjct: 102 WEQAQGYLKKFYPSNSKTKDANSLEAKLKQMQKFFRLPITGMLNSHIIKIMQKPRCGVPD 281
Query: 106 QTRGSSKFNIRRKRYAL--TGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVT 163
Y+L + KW K +TY I + T + + + +A +W N
Sbjct: 282 VAE-----------YSLFPSQPKWTSKIVTYRIVSYTRDLPHVTVNQLVTKALKMWSNEI 428
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PL+F++V + DI I FA G HGD+ PFDG G LAHA+ PGPG+GGD HFD
Sbjct: 429 PLSFKKVSWGI-------ADIIIGFARGAHGDAYPFDGPGNTLAHAFAPGPGLGGDAHFD 587
Query: 224 SDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDL 283
DE W+ G G + A HELGH+LGL HS+DP A+M P Y + + +FKL DD+
Sbjct: 588 EDEHWSDG--GSIGINFLYAATHELGHSLGLAHSSDPNAVMYPTYGEVYSKDFKLSQDDI 761
Query: 284 QGIQKIYG 291
GIQK+YG
Sbjct: 762 NGIQKLYG 785
>dbj|AB057752.1|AB057752 Paralichthys olivaceus MMP2 mRNA for gelatinase, complete cds
Length = 3245
Score = 184 bits (467), Expect = 2e-44
Identities = 114/315 (36%), Positives = 153/315 (48%), Gaps = 4/315 (1%)
Frame = +2
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
+D D W G G LFLVA HE GHALGLEHS DP A+MAP Y + T +F+L +D
Sbjct: 1322 YDDDRKW--GFCPDQGYSLFLVAAHEFGHALGLEHSQDPGALMAPIYTF--TKDFRLSHD 1489
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPN 341
D+QGIQ++YG +
Sbjct: 1490 DVQGIQELYGASTDQPQTPTQGPVTPM--------------------------------D 1573
Query: 342 ICDGN--FNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
IC F+ +A +R E F FKD++ +R N R PM + +W LP IDA YEN
Sbjct: 1574 ICKEPVVFDAIAQIRGETFFFKDRFLFRSVNYRSKPSGPMLVATYWPELPAKIDAAYENP 1753
Query: 400 -DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
+ VFF G + WV+K L+ GYP + +L ID+A + KTY F GD+
Sbjct: 1754 LEEKTVFFSGKEMWVYKANDLERGYPKKISSLDLPTDLSQIDAAFNFRKNKKTYLFAGDK 1933
Query: 459 YWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
+WRY EE K MD G+P+ I W GIP+ AF ++YF+KG Y+K + LK+
Sbjct: 1934 FWRYDEETKIMDAGFPRLIADSWNGIPDGLDSAFSLNGIDYSYFFKGNHYFKLEDSSLKI 2113
Query: 518 EPGYPRSILKDFMGC 532
I KD++GC
Sbjct: 2114 VK--LGEITKDWLGC 2152
Score = 135 bits (339), Expect = 2e-29
Identities = 71/164 (43%), Positives = 96/164 (58%)
Frame = +2
Query: 69 MQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQ 128
++ L MQ+F+ + TG++D T++ MKKPRCGVPD + +N ++ WQ
Sbjct: 389 LKDTLKKMQKFFSLQETGEIDAKTVEIMKKPRCGVPDV----ANYNFFHRK-----PMWQ 541
Query: 129 HKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIF 188
ITY I + + + A RAF VW +VTPL+F + L +G + DI I F
Sbjct: 542 KNDITYRILGYSLDLDEEVINDAFFRAFKVWSDVTPLSF-----TRLMDG--EADIMINF 700
Query: 189 ASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGN 232
HGD PFDG+ G LAHA+ PGPGIGGD+HFD DE WTLG+
Sbjct: 701 GRNEHGDGYPFDGKDGLLAHAFAPGPGIGGDSHFDDDEQWTLGD 832
>gb|BC003635.1|BC003635 Homo sapiens, matrix metalloproteinase 7 (matrilysin, uterine),
clone MGC:3913 IMAGE:3545760, mRNA, complete cds
Length = 1140
Score = 182 bits (462), Expect = 8e-44
Identities = 101/246 (41%), Positives = 137/246 (55%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL S ++A ++++ L MQ+F+G+ +TG ++ + I+ M+KPRCGVPD
Sbjct: 134 WEQAQDYLKRFYLYDSETKNANSLEAKLKEMQKFFGLPITGMLNSHVIEIMQKPRCGVPD 313
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
S N KW K +TY I + T + R + +A ++W PL
Sbjct: 314 VAEYSLFPN---------SPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPL 466
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
F +V + DI I FA G HGDS PFDG G LAHA+ PG G+GGD HFD D
Sbjct: 467 HFRKVVWGT-------ADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDED 625
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
E WT G+ G + A HELGH+LG+ HS+DP A+M P Y + NFKL DD++G
Sbjct: 626 ERWTDGSSL--GINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKG 799
Query: 286 IQKIYG 291
IQK+YG
Sbjct: 800 IQKLYG 817
>emb|X07819.1|HSPUMP1 Human pump-1 mRNA homolog. to metalloproteinase, collagenase and
stromelysin
Length = 1078
Score = 182 bits (461), Expect = 1e-43
Identities = 101/246 (41%), Positives = 136/246 (55%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL S ++A ++++ L MQ+F+G+ +TG ++ I+ M+KPRCGVPD
Sbjct: 121 WEQAQDYLKRFYLYDSETKNANSLEAKLKEMQKFFGLPITGMLNSRVIEIMQKPRCGVPD 300
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
S N KW K +TY I + T + R + +A ++W PL
Sbjct: 301 VAEYSLFPN---------SPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPL 453
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
F +V + DI I FA G HGDS PFDG G LAHA+ PG G+GGD HFD D
Sbjct: 454 HFRKVVWGT-------ADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDED 612
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
E WT G+ G + A HELGH+LG+ HS+DP A+M P Y + NFKL DD++G
Sbjct: 613 ERWTDGSSL--GINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKG 786
Query: 286 IQKIYG 291
IQK+YG
Sbjct: 787 IQKLYG 804
>emb|Z11887.1|HSPUMP1G H.sapiens PUMP-1 gene encoding PUMP
Length = 1132
Score = 182 bits (461), Expect = 1e-43
Identities = 101/246 (41%), Positives = 136/246 (55%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL S ++A ++++ L MQ+F+G+ +TG ++ I+ M+KPRCGVPD
Sbjct: 121 WEQAQDYLKRFYLYDSETKNANSLEAKLKEMQKFFGLPITGMLNSRVIEIMQKPRCGVPD 300
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
S N KW K +TY I + T + R + +A ++W PL
Sbjct: 301 VAEYSLFPN---------SPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPL 453
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
F +V + DI I FA G HGDS PFDG G LAHA+ PG G+GGD HFD D
Sbjct: 454 HFRKVVWGT-------ADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDED 612
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
E WT G+ G + A HELGH+LG+ HS+DP A+M P Y + NFKL DD++G
Sbjct: 613 ERWTDGSSL--GINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKG 786
Query: 286 IQKIYG 291
IQK+YG
Sbjct: 787 IQKLYG 804
>ref|NM_002423.2| Homo sapiens matrix metalloproteinase 7 (matrilysin, uterine)
(MMP7), mRNA
Length = 1127
Score = 182 bits (461), Expect = 1e-43
Identities = 101/246 (41%), Positives = 136/246 (55%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL S ++A ++++ L MQ+F+G+ +TG ++ I+ M+KPRCGVPD
Sbjct: 141 WEQAQDYLKRFYLYDSETKNANSLEAKLKEMQKFFGLPITGMLNSRVIEIMQKPRCGVPD 320
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
S N KW K +TY I + T + R + +A ++W PL
Sbjct: 321 VAEYSLFPN---------SPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPL 473
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
F +V + DI I FA G HGDS PFDG G LAHA+ PG G+GGD HFD D
Sbjct: 474 HFRKVVWGT-------ADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDED 632
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
E WT G+ G + A HELGH+LG+ HS+DP A+M P Y + NFKL DD++G
Sbjct: 633 ERWTDGSSL--GINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKG 806
Query: 286 IQKIYG 291
IQK+YG
Sbjct: 807 IQKLYG 824
>dbj|AB000719.1|AB000719 Hemicentrotus pulcherrimus mRNA for hatching enzyme, complete cds
Length = 2463
Score = 176 bits (446), Expect = 6e-42
Identities = 140/477 (29%), Positives = 215/477 (44%), Gaps = 14/477 (2%)
Frame = +1
Query: 47 LQKYGYLPPTDPRMSVLRSAE-TMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
L+++GY+P S A SA+ QQ GIN TG +D T + PRCGVPD
Sbjct: 373 LEQFGYVPLG----STFGEANINYTSAILEYQQNGGINQTGILDAETAALLDTPRCGVPD 540
Query: 106 QTRGSSKFNIRRKRYALTGQKW-QHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTP 164
Y G W ++ +TYS ++ + + +RRAF VW +V+
Sbjct: 541 ILP-----------YVTGGIAWPRNVAVTYSFGTLSNDLSQTAIKNELRRAFQVWDDVSS 687
Query: 165 LTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDS 224
LTF EV S VDI I F S HGD FDG+GG LAHA+ P GD HFD
Sbjct: 688 LTFREVVDSS------SVDIRIKFGSYEHGDGISFDGQGGVLAHAFLPR---NGDAHFDD 840
Query: 225 DEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQ 284
E WT+G + G +LF VA HE GH+LGL HS+ +A+M P+Y+ NF L DD+
Sbjct: 841 SERWTIGT--NSGTNLFQVAAHEFGHSLGLYHSDVQSALMYPYYRGY-NPNFNLDRDDIA 1011
Query: 285 GIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP-NIC 343
GI +YG + P C
Sbjct: 1012GITSLYGRNTGSTTTTTRRPTITRTTTRRTTTRRTTTQLATTQTTTIRPPTYPTPPRQAC 1191
Query: 344 DGNFNTLAILR---REMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSD 400
G+F+ A+++ ++ +++WR+ ++ + + F LP ++DA ++N
Sbjct: 1192TGSFD--AVIKDNSDRIYALAGRYYWRL--DQASPSWGVVRNRFGFDLPENVDASFQN-- 1353
Query: 401 GNFVFFKGNKYWVFKDTTLQ--PGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
G F +F Y+ ++ +T + P P + +G P ID+ D G TYFFKG
Sbjct: 1354GIFSYFFSGCYYYYQTSTRRRFPRTPFNRRWVG---LPCDIDAVYKSGDSGTTYFFKGRF 1524
Query: 459 YWRY--SEEMKTMDP--GYPK--PITIWKGIPESPQGAFVHKENGFTYFYKGKEYWK 509
+++ S +++ P Y + P + G+ A V ++ + +FY+ Y++
Sbjct: 1525VYKFSSSNQLQRRSPISSYFRNTPYALRDGVE-----AVVRVDDVYLHFYRDGRYYR 1680
>ref|NM_012864.1| Rattus norvegicus Matrix metalloproteinase 7 (matrilysin) (Mmp7),
mRNA
Length = 1057
Score = 176 bits (446), Expect = 6e-42
Identities = 98/246 (39%), Positives = 132/246 (52%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL S + A + L MQ+F+G+ TGK+ ++ M+KPRCGVPD
Sbjct: 136 WEQAQNYLRKFYLHDSKTKKATSAVDKLREMQKFFGLPETGKLSPRVMEIMQKPRCGVPD 315
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
S N KW + +TY I + T + + ++RA +W PL
Sbjct: 316 VAEFSLMPN---------SPKWHSRTVTYRIVSYTTDLPRFLVDQIVKRALRMWSMQIPL 468
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
F+ V + DI I FA G HGD+ PFDG G L HA+ PGPG+GGD HFD D
Sbjct: 469 NFKRVSWGT-------ADIIIGFARGDHGDNFPFDGPGNTLGHAFAPGPGLGGDAHFDKD 627
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
E WT G + G + VA HELGH+LGL HS+ P+++M P YQ +++F L DD+ G
Sbjct: 628 EYWTDGEDS--GVNFLFVATHELGHSLGLGHSSVPSSVMYPTYQGDHSEDFSLTKDDIAG 801
Query: 286 IQKIYG 291
IQK+YG
Sbjct: 802 IQKLYG 819
>gb|L24374.1|RATMPMM Rattus norvegicus matrilysin (MMP-7) mRNA, complete cds
Length = 1057
Score = 176 bits (446), Expect = 6e-42
Identities = 98/246 (39%), Positives = 132/246 (52%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL S + A + L MQ+F+G+ TGK+ ++ M+KPRCGVPD
Sbjct: 136 WEQAQNYLRKFYLHDSKTKKATSAVDKLREMQKFFGLPETGKLSPRVMEIMQKPRCGVPD 315
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
S N KW + +TY I + T + + ++RA +W PL
Sbjct: 316 VAEFSLMPN---------SPKWHSRTVTYRIVSYTTDLPRFLVDQIVKRALRMWSMQIPL 468
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
F+ V + DI I FA G HGD+ PFDG G L HA+ PGPG+GGD HFD D
Sbjct: 469 NFKRVSWGT-------ADIIIGFARGDHGDNFPFDGPGNTLGHAFAPGPGLGGDAHFDKD 627
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
E WT G + G + VA HELGH+LGL HS+ P+++M P YQ +++F L DD+ G
Sbjct: 628 EYWTDGEDS--GVNFLFVATHELGHSLGLGHSSVPSSVMYPTYQGDHSEDFSLTKDDIAG 801
Query: 286 IQKIYG 291
IQK+YG
Sbjct: 802 IQKLYG 819
>gb|AF144759.1|AF144759 Bos taurus MT2-MMP protein (MMP-15) mRNA, partial cds
Length = 380
Score = 175 bits (444), Expect = 1e-41
Identities = 73/125 (58%), Positives = 94/125 (74%)
Frame = +3
Query: 371 NRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITL 430
N V+D YPM I +FWRGLP I A YE DG FVFFKG++YW+F++ L+PGYP L +
Sbjct: 3 NCVLDNYPMPIGHFWRGLPGDISAAYERQDGRFVFFKGDRYWLFREANLEPGYPQPLTSY 182
Query: 431 GNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGA 490
G GIP ID+AIWWE G T+FF+ DRYWR++EE + DPGYPKPI++W+GIP SP+GA
Sbjct: 183 GLGIPYDRIDTAIWWEPTGHTFFFQEDRYWRFNEETQRGDPGYPKPISVWQGIPASPKGA 362
Query: 491 FVHKE 495
F+ +
Sbjct: 363 FLSND 377
Score = 47.0 bits (110), Expect = 0.005
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Frame = +3
Query: 360 FKDQWFWRVRNNRVMDGYPMQITYFWRGLP-PSID-AVYENSDGNFVFFKGNKYWVFKDT 417
FK +W R + GYP +T + G+P ID A++ G+ FF+ ++YW F +
Sbjct: 108 FKGDRYWLFREANLEPGYPQPLTSYGLGIPYDRIDTAIWWEPTGHTFFFQEDRYWRFNEE 287
Query: 418 TLQ--PGYPHDLITLGNGIP 435
T + PGYP I++ GIP
Sbjct: 288 TQRGDPGYPKP-ISVWQGIP 344
>ref|NM_010810.1| Mus musculus matrix metalloproteinase 7 (Mmp7), mRNA
Length = 1072
Score = 172 bits (436), Expect = 9e-41
Identities = 95/246 (38%), Positives = 128/246 (51%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL P S + ++ L MQ+F+G+ MTGK+ ++ M+KPRCGVPD
Sbjct: 143 WEQAQNYLRKFYPHDSKTKKVNSLVDNLKEMQKFFGLPMTGKLSPYIMEIMQKPRCGVPD 322
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
S N KW + +TY I + T + + +++A +W PL
Sbjct: 323 VAEYSLMPN---------SPKWHSRIVTYRIVSYTSDLPRIVVDQIVKKALRMWSMQIPL 475
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
F+ V + DI I FA HGDS PFDG G L HA+ PGPG+GGD HFD D
Sbjct: 476 NFKRVSWGT-------ADIIIGFARRDHGDSFPFDGPGNTLGHAFAPGPGLGGDAHFDKD 634
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
E WT + G + A HE GH+LGL HS+ P +M P YQ +++F L DD+ G
Sbjct: 635 EYWT--DDEDAGVNFLFAATHEFGHSLGLSHSSVPGTVMYPTYQRDYSEDFSLTKDDIAG 808
Query: 286 IQKIYG 291
IQK+YG
Sbjct: 809 IQKLYG 826
>gb|L36244.1|MUSMAT Mus musculus metalloproteinase matrilysin mRNA, complete cds
Length = 1072
Score = 172 bits (436), Expect = 9e-41
Identities = 95/246 (38%), Positives = 128/246 (51%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL P S + ++ L MQ+F+G+ MTGK+ ++ M+KPRCGVPD
Sbjct: 143 WEQAQNYLRKFYPHDSKTKKVNSLVDNLKEMQKFFGLPMTGKLSPYIMEIMQKPRCGVPD 322
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
S N KW + +TY I + T + + +++A +W PL
Sbjct: 323 VAEYSLMPN---------SPKWHSRIVTYRIVSYTSDLPRIVVDQIVKKALRMWSMQIPL 475
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
F+ V + DI I FA HGDS PFDG G L HA+ PGPG+GGD HFD D
Sbjct: 476 NFKRVSWGT-------ADIIIGFARRDHGDSFPFDGPGNTLGHAFAPGPGLGGDAHFDKD 634
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
E WT + G + A HE GH+LGL HS+ P +M P YQ +++F L DD+ G
Sbjct: 635 EYWT--DDEDAGVNFLFAATHEFGHSLGLSHSSVPGTVMYPTYQRDYSEDFSLTKDDIAG 808
Query: 286 IQKIYG 291
IQK+YG
Sbjct: 809 IQKLYG 826
>gb|U04444.1|FDU04444 Felis domesticus PUMP-1 mRNA, partial cds
Length = 1001
Score = 171 bits (432), Expect = 3e-40
Identities = 97/246 (39%), Positives = 130/246 (52%)
Frame = +2
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL P + R A++ + L MQ+F+ + +TG +D I M++PRCG+PD
Sbjct: 80 WKQAQEYLKRFYPSDAKSRDADSFGAQLKEMQKFFRLPVTGMLDSRVIVVMQQPRCGLPD 259
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPL 165
N KW K +TY I + T + + +A ++W PL
Sbjct: 260 TGEDLPSRN---------RPKWISKVVTYRIISYTRDLPRVTVDHLVAKALNMWSKEIPL 412
Query: 166 TFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSD 225
+F V DI I FA G HGD PFDG GG LAHAY PGPG+GGD HFD D
Sbjct: 413 SFRRVVLGI-------PDIVIGFARGAHGDFYPFDGPGGTLAHAYEPGPGLGGDAHFDED 571
Query: 226 EPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
E W G G + VA HELGH+LGL HS+DP ++M P Y +++NFKL D++
Sbjct: 572 ERWADGRGL--GINFLAVATHELGHSLGLRHSSDPDSVMYPTYGARDSENFKLSPGDIRE 745
Query: 286 IQKIYG 291
IQ++YG
Sbjct: 746 IQELYG 763
>ref|NM_071389.1| Caenorhabditis elegans
Length = 1740
Score = 169 bits (429), Expect = 6e-40
Identities = 111/266 (41%), Positives = 140/266 (51%), Gaps = 20/266 (7%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSV------LRSAETM-QSALAAMQQFYGINMTGKVDRNTIDWMKK 98
+LQ +GY+PP++ S ++SAE + +SA+ Q+F GI TG +D T M
Sbjct: 178 YLQTFGYVPPSNSLQSRNGMAGDIQSAEQVFKSAIRKFQEFAGIAKTGFLDAATKAKMAL 357
Query: 99 PRCGVPDQ----TRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRR 154
RCGV D T GSS+F KW +TYSI++ + + + RRAI
Sbjct: 358 SRCGVTDAPLALTSGSSQF------------KWSKTRLTYSIESWSSDLSKDDVRRAISE 501
Query: 155 AFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGP 214
A+ +W VTPL F EVP DI I F H D PFDGEGG LAHA P
Sbjct: 502 AYGLWSKVTPLEFSEVPAGSTS------DIKIRFGVRNHNDPWPFDGEGGVLAHATMPES 663
Query: 215 GIGGDTHFDSDEPWTLGNP----NHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQY 270
G+ HFD DE WT + N++ DL VA+HE GH LGLEHS D AIMAPFYQ
Sbjct: 664 GM---FHFDDDENWTYKDARKIHNNEATDLLAVAIHEGGHTLGLEHSRDENAIMAPFYQK 834
Query: 271 M--ETDNFKLPN---DDLQGIQKIYG 291
+ N+ PN DD+ IQ IYG
Sbjct: 835 TTDSSGNYVYPNLKSDDISAIQAIYG 912
>dbj|AB007815.1|AB007815 Caenorhabditis elegans mRNA for matrix metalloproteinase, complete
cds
Length = 1766
Score = 169 bits (429), Expect = 6e-40
Identities = 111/266 (41%), Positives = 140/266 (51%), Gaps = 20/266 (7%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSV------LRSAETM-QSALAAMQQFYGINMTGKVDRNTIDWMKK 98
+LQ +GY+PP++ S ++SAE + +SA+ Q+F GI TG +D T M
Sbjct: 184 YLQTFGYVPPSNSLQSRNGMAGDIQSAEQVFKSAIRKFQEFAGIAKTGFLDAATKAKMAL 363
Query: 99 PRCGVPDQ----TRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRR 154
RCGV D T GSS+F KW +TYSI++ + + + RRAI
Sbjct: 364 SRCGVTDAPLALTSGSSQF------------KWSKTRLTYSIESWSSDLSKDDVRRAISE 507
Query: 155 AFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGP 214
A+ +W VTPL F EVP DI I F H D PFDGEGG LAHA P
Sbjct: 508 AYGLWSKVTPLEFSEVPAGSTS------DIKIRFGVRNHNDPWPFDGEGGVLAHATMPES 669
Query: 215 GIGGDTHFDSDEPWTLGNP----NHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQY 270
G+ HFD DE WT + N++ DL VA+HE GH LGLEHS D AIMAPFYQ
Sbjct: 670 GM---FHFDDDENWTYKDARKIHNNEATDLLAVAIHEGGHTLGLEHSRDENAIMAPFYQK 840
Query: 271 M--ETDNFKLPN---DDLQGIQKIYG 291
+ N+ PN DD+ IQ IYG
Sbjct: 841 TTDSSGNYVYPNLKSDDISAIQAIYG 918
>ref|XM_017384.1| Homo sapiens matrix metalloproteinase 7 (matrilysin, uterine)
(MMP7), mRNA
Length = 1120
Score = 137 bits (344), Expect(2) = 3e-39
Identities = 69/142 (48%), Positives = 87/142 (60%)
Frame = +1
Query: 150 RAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHA 209
R + +A ++W PL F +V + DI I FA G HGDS PFDG G LAHA
Sbjct: 427 RLVSKALNMWGKEIPLHFRKVVWGT-------ADIMIGFARGAHGDSYPFDGPGNTLAHA 585
Query: 210 YFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQ 269
+ PG G+GGD HFD DE WT G+ G + A HELGH+LG+ HS+DP A+M P Y
Sbjct: 586 FAPGTGLGGDAHFDEDERWTDGSSL--GINFLYAATHELGHSLGMGHSSDPNAVMYPTYG 759
Query: 270 YMETDNFKLPNDDLQGIQKIYG 291
+ NFKL DD++GIQK+YG
Sbjct: 760 NGDPQNFKLSQDDIKGIQKLYG 825
Score = 51.6 bits (122), Expect(2) = 3e-39
Identities = 30/89 (33%), Positives = 45/89 (49%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q YL S ++A ++++ L MQ+F+G+ +TG ++ I+ M+KPRCGVPD
Sbjct: 141 WEQAQDYLKRFYLYDSETKNANSLEAKLKEMQKFFGLPITGMLNSRVIEIMQKPRCGVPD 320
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITY 134
S N KW K +TY
Sbjct: 321 VAEYSLFPN---------SPKWTSKVVTY 380
>gb|U62529.1|ECU62529 Equus caballus matrix metalloproteinase 3 mRNA, complete cds
Length = 1804
Score = 167 bits (422), Expect = 4e-39
Identities = 100/278 (35%), Positives = 142/278 (50%), Gaps = 12/278 (4%)
Frame = +2
Query: 26 LLWILCATVCGT--------EQYFNVEV---WLQKYGYLPPTDPRMSVLRSAETMQSALA 74
+L +LC C ++ N+++ +L+KY L + + + + +
Sbjct: 68 ILLLLCVAACSAYPLDRSARDEDSNMDLLQDYLEKYYDLGKEMRQYVRRKDSGPIVKKIQ 247
Query: 75 AMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITY 134
MQ+F G+ +TGK+D +T++ M K RCGVPD ++ + KW H+TY
Sbjct: 248 EMQKFLGLKVTGKLDSDTVEVMHKSRCGVPDVGHFTTFPGM---------PKWSKTHLTY 400
Query: 135 SIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHG 194
I N T + + +A +W+ VTPLTF + E DI I FA HG
Sbjct: 401 RIVNYTQDLPRDAVDSDVEKALKIWEEVTPLTFSRIYEGE-------ADIMITFAVREHG 559
Query: 195 DSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGL 254
D PFDG G LAHAY PGPG+ GD HFD DE WT + G + LVA HELGH+LGL
Sbjct: 560 DFFPFDGPGKVLAHAYPPGPGMNGDAHFDDDEHWT---KDASGINFLLVAAHELGHSLGL 730
Query: 255 EHSNDPTAIMAPFYQYME-TDNFKLPNDDLQGIQKIYG 291
HS + A+M P Y ++ +L DD+ GIQ +YG
Sbjct: 731 YHSTNTEALMYPLYNTLKGPARVRLSQDDVTGIQSLYG 844
Score = 123 bits (308), Expect = 6e-26
Identities = 70/180 (38%), Positives = 103/180 (56%), Gaps = 4/180 (2%)
Frame = +2
Query: 342 ICDG--NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENS 399
+CD +F+ ++ LR E+ FKD++FWR ++ + I+ FW LP IDA YE +
Sbjct: 917 MCDPALSFDAISTLRGEILFFKDRYFWRKTFRTLVPEFH-PISSFWPSLPSGIDAAYEVT 1093
Query: 400 DGNFVF-FKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
+ VF FKGNK+W + Q GYP + TLG ID+AI+ ++ KTYFF D+
Sbjct: 1094 SRDSVFIFKGNKFWAIRGNEEQAGYPRGIHTLGFPPTVRKIDAAIFDKEKQKTYFFVEDK 1273
Query: 459 YWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
YWR+ E+ ++M+PGYPK I + GI AF + GF YF+ G ++F+ KV
Sbjct: 1274 YWRFDEKRQSMEPGYPKQIAEDFPGIDSKLDAAF--ESFGFFYFFSGSSQFEFDPNAKKV 1447
Score = 71.6 bits (174), Expect = 2e-10
Identities = 50/152 (32%), Positives = 74/152 (47%), Gaps = 5/152 (3%)
Frame = +2
Query: 391 SIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGK 450
S DA+ G +FFK +W TL P + H + + +P GID+A
Sbjct: 935 SFDAI-STLRGEILFFKDRYFWRKTFRTLVPEF-HPISSFWPSLPS-GIDAAYEVTSRDS 1105
Query: 451 TYFFKGDRYW--RYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGK 505
+ FKG+++W R +EE GYP+ I G P + + A KE TYF+
Sbjct: 1106 VFIFKGNKFWAIRGNEEQA----GYPRGIHTL-GFPPTVRKIDAAIFDKEKQKTYFFVED 1270
Query: 506 EYWKFNNQILKVEPGYPRSILKDFMGCDGPTD 537
+YW+F+ + +EPGYP+ I +DF G D D
Sbjct: 1271 KYWRFDEKRQSMEPGYPKQIAEDFPGIDSKLD 1366
>gb|AF267159.1|AF267159 Ovis aries gelatinase A mRNA, partial cds
Length = 744
Score = 161 bits (408), Expect = 2e-37
Identities = 95/250 (38%), Positives = 128/250 (51%), Gaps = 5/250 (2%)
Frame = +1
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
+++D D W G G LFLVA HE GHA+GLEHS DP A+MAP Y Y T NF+L
Sbjct: 94 SNYDDDRKW--GFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTY--TKNFRLS 261
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
+DD+QGIQ++YG
Sbjct: 262 HDDIQGIQELYGASPDIDTGTGPTPTLGP-----------------------------VT 354
Query: 340 PNIC--DGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 397
P +C D F+ ++ +R E+F FKD++ WR R P+ + FW LP IDAVYE
Sbjct: 355 PELCKQDIVFDGISQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEKIDAVYE 534
Query: 398 N-SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP--HGIDSAIWWEDVGKTYFF 454
+ + VFF GN+YWV+ +TL+ GYP L +L G+PP +D+A W KTY F
Sbjct: 535 DPQEEKAVFFAGNEYWVYSASTLERGYPKPLTSL--GLPPDVQKVDAAFNWSKNKKTYIF 708
Query: 455 KGDRYWRYSE 464
GD++WRY+E
Sbjct: 709 AGDKFWRYNE 738
Score = 37.0 bits (84), Expect = 5.7
Identities = 21/77 (27%), Positives = 33/77 (42%)
Frame = +1
Query: 449 GKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYW 508
G+ +FFK WR + + G T W +PE + + F+ G EYW
Sbjct: 406 GEIFFFKDRFIWR-TVTPRDKPTGPLLVATFWPELPEKIDAVYEDPQEEKAVFFAGNEYW 582
Query: 509 KFNNQILKVEPGYPRSI 525
++ L E GYP+ +
Sbjct: 583 VYSASTL--ERGYPKPL 627
>gb|AF156935.1|AF156935 Synthetic construct stromelysin catalytic domain (S1CD) gene,
partial cds
Length = 525
Score = 155 bits (392), Expect = 1e-35
Identities = 82/167 (49%), Positives = 100/167 (59%), Gaps = 1/167 (0%)
Frame = +1
Query: 126 KWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDIT 185
KW+ H+TY I N TP + A+ +A VW+ VTPLTF S L G + DI
Sbjct: 25 KWRKTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTF-----SRLYEG--EADIM 183
Query: 186 IIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAV 245
I FA HGD PFDG G LAHAY PGPGI GD HFD DE WT + G +LFLVA
Sbjct: 184 ISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT---KDTTGTNLFLVAA 354
Query: 246 HELGHALGLEHSNDPTAIMAPFYQYM-ETDNFKLPNDDLQGIQKIYG 291
HE+GH+LGL HS + A+M P Y + + F+L DD+ GIQ +YG
Sbjct: 355 HEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYG 495
>gb|AF134714.1|AF134714 Bos taurus MMP-1 protein mRNA, partial cds
Length = 524
Score = 153 bits (387), Expect = 4e-35
Identities = 79/165 (47%), Positives = 102/165 (60%)
Frame = +3
Query: 127 WQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITI 186
W++ ++TY I+N TP + + +AI +AF +W NVTPLTF +V + DI I
Sbjct: 39 WENTNLTYRIENYTPDLSRADVDQAIEKAFQLWSNVTPLTFTKVSEGQ-------ADIMI 197
Query: 187 IFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVH 246
F G H D+SPFDG GG LAHA+ PG GIGGD HFD DE WT N +L+ VA H
Sbjct: 198 SFVRGDHRDNSPFDGPGGNLAHAFQPGAGIGGDAHFDDDEWWT---SNFQDYNLYRVAAH 368
Query: 247 ELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
E GH+LGL HS D A+M P Y + + + +L DD+ GIQ IYG
Sbjct: 369 EFGHSLGLAHSTDIGALMYPSYTF--SGDVQLSQDDIDGIQAIYG 497
>gb|AF149850.1|AF149850 Canis familiaris matrix metalloproteinase-13 mRNA, partial cds
Length = 590
Score = 152 bits (385), Expect = 7e-35
Identities = 94/241 (39%), Positives = 118/241 (48%), Gaps = 2/241 (0%)
Frame = +3
Query: 151 AIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAY 210
A ++AF VW +VTPL F + L +G DI I F + HGD PFDG G LAHA+
Sbjct: 3 AFKKAFKVWSDVTPLNF-----TRLHDGT--ADIMISFGTKEHGDFYPFDGPSGLLAHAF 161
Query: 211 FPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQY 270
PGP GGD HFD DE WT + G +LFLVA HE GH+LGL+HS DP A+M P Y Y
Sbjct: 162 PPGPNYGGDAHFDDDETWTSSSK---GYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTY 332
Query: 271 METDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXX 330
+F LP+DD+QGIQ +YG
Sbjct: 333 TGKSHFMLPDDDVQGIQSLYGPGDEDPNPRHPKT-------------------------- 434
Query: 331 XXXXXXGAKPNICDGNFNTLAI--LRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGL 388
P+ CD + + AI LR E +FKD++FWR+ +V D FW L
Sbjct: 435 ---------PDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQV-DAELFLTKSFWPEL 584
Query: 389 P 389
P
Sbjct: 585 P 587
>emb|AL133448.4|CNS01DV2 Human chromosome 14 DNA sequence *** IN PROGRESS *** BAC R-413B13 of
library RPCI-11 from chromosome 14 of Homo sapiens (Human),
complete sequence
Length = 173803
Score = 147 bits (372), Expect = 2e-33
Identities = 68/104 (65%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Frame = +2
Query: 135 SIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENG-KRDVDITIIFASGFH 193
SI+N TPKVG+ T AIR+AF VW++ TPL F EVPY+ + G ++ DI I FA GFH
Sbjct: 137627 SIQNYTPKVGEYATYEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFH 137806
Query: 194 GDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDG 237
GDS+PFDGEGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +G
Sbjct: 137807 GDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNG 137938
Score = 127 bits (320), Expect = 2e-27
Identities = 71/182 (39%), Positives = 95/182 (52%), Gaps = 46/182 (25%)
Frame = +3
Query: 360 FKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGN---------- 409
F+++WFWRVRNN+VMDGYPM I FWRGLP SI+ YE DG FVFFKGN
Sbjct: 139584 FQERWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYERKDGKFVFFKGNQALHFSLWE* 139763
Query: 410 ------------------------------KYWVFKDTTLQPGYPHDLITLGNGIPPHGI 439
K+WVF + +L+PGYP + LG G+P I
Sbjct: 139764 GGSP*RS*FPLKSLEPKLNPDVALLSSPGDKHWVFDEASLEPGYPKHIKELGRGLPTDKI 139943
Query: 440 DSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYP-KP-----ITIWKGIPESPQGAFVH 493
D+A++W GKTYFF+G++ ++ + PG P KP ++ + P PQ A +
Sbjct: 139944 DAALFWMPNGKTYFFRGNK-----*DLNPLTPGLPQKPPPPQIPSVLEKDPLYPQHASLE 140108
Query: 494 KE 495
KE
Sbjct: 140109 KE 140114
Score = 111 bits (277), Expect = 2e-22
Identities = 55/110 (50%), Positives = 72/110 (65%)
Frame = +1
Query: 498 FTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDN 557
FTYFYKG +YWKFNNQ LKVEPGYP+S L+D+MGC R EG +V I+ +
Sbjct: 140929 FTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPS-GGRPDEGTEEETEVIIIEVDEE 141105
Query: 558 TASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
V A A+V+P +L L +L + VF F+R GTPR +LYC+RS+ + V
Sbjct: 141106 GGGAVSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPRRLLYCQRSLLDKV 141255
Score = 99.4 bits (246), Expect = 9e-19
Identities = 50/88 (56%), Positives = 62/88 (69%), Gaps = 9/88 (10%)
Frame = +1
Query: 213 GPGIGGDTHFDSDEPWTLGN---------PNHDGNDLFLVAVHELGHALGLEHSNDPTAI 263
G +GG+T E L P GND+FLVAVHELGHALGLEHS+DP+AI
Sbjct: 138376 GSRLGGETKAAGGEAGRLREGTQAAIVTVPILPGNDIFLVAVHELGHALGLEHSSDPSAI 138555
Query: 264 MAPFYQYMETDNFKLPNDDLQGIQKIYG 291
MAPFYQ+M+T+NF LP+DD +GIQ++YG
Sbjct: 138556 MAPFYQWMDTENFVLPDDDRRGIQQLYG 138639
Score = 63.9 bits (154), Expect = 4e-08
Identities = 26/52 (50%), Positives = 40/52 (76%)
Frame = +3
Query: 42 NVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTI 93
+++ WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+ +TGK D +T+
Sbjct: 136701 SLQAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTM 136856
Score = 57.4 bits (137), Expect = 4e-06
Identities = 23/39 (58%), Positives = 29/39 (73%)
Frame = +3
Query: 96 MKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITY 134
M++PRCGVPD+ K N+RRKRYA+ G KWQH IT+
Sbjct: 137136 MRRPRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITF 137252
Score = 55.1 bits (131), Expect = 2e-05
Identities = 21/44 (47%), Positives = 33/44 (74%)
Frame = +2
Query: 454 FKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENG 497
F RY+R++EE++ +D YPK I +W+GIPESP+G+F+ + G
Sbjct: 140456 FPFPRYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEG 140587
Score = 43.1 bits (100), Expect = 0.079
Identities = 18/22 (81%), Positives = 21/22 (94%)
Frame = +1
Query: 340 PNICDGNFNTLAILRREMFVFK 361
PNICDGNF+T+A+LR EMFVFK
Sbjct: 139024 PNICDGNFDTVAMLRGEMFVFK 139089
>emb|AL135998.6|CNS01DVO Human chromosome 14 DNA sequence BAC R-137H15 of library RPCI-11 from
chromosome 14 of Homo sapiens (Human), complete sequence
Length = 165871
Score = 147 bits (372), Expect = 2e-33
Identities = 68/104 (65%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Frame = -1
Query: 135 SIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENG-KRDVDITIIFASGFH 193
SI+N TPKVG+ T AIR+AF VW++ TPL F EVPY+ + G ++ DI I FA GFH
Sbjct: 62776 SIQNYTPKVGEYATYEAIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMIFFAEGFH 62597
Query: 194 GDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDG 237
GDS+PFDGEGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +G
Sbjct: 62596 GDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVRNEDLNG 62465
Score = 127 bits (320), Expect = 2e-27
Identities = 71/182 (39%), Positives = 95/182 (52%), Gaps = 46/182 (25%)
Frame = -2
Query: 360 FKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGN---------- 409
F+++WFWRVRNN+VMDGYPM I FWRGLP SI+ YE DG FVFFKGN
Sbjct: 60819 FQERWFWRVRNNQVMDGYPMPIGQFWRGLPASINTAYERKDGKFVFFKGNQALHFSLWE* 60640
Query: 410 ------------------------------KYWVFKDTTLQPGYPHDLITLGNGIPPHGI 439
K+WVF + +L+PGYP + LG G+P I
Sbjct: 60639 GGSP*RS*FPLKSLEPKLNPDVALLSSPGDKHWVFDEASLEPGYPKHIKELGRGLPTDKI 60460
Query: 440 DSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYP-KP-----ITIWKGIPESPQGAFVH 493
D+A++W GKTYFF+G++ ++ + PG P KP ++ + P PQ A +
Sbjct: 60459 DAALFWMPNGKTYFFRGNK-----*DLNPLTPGLPQKPPPPQIPSVLEKDPLYPQHASLE 60295
Query: 494 KE 495
KE
Sbjct: 60294 KE 60289
Score = 111 bits (277), Expect = 2e-22
Identities = 55/110 (50%), Positives = 72/110 (65%)
Frame = -3
Query: 498 FTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDKEGLSPPDDVDIVIKLDN 557
FTYFYKG +YWKFNNQ LKVEPGYP+S L+D+MGC R EG +V I+ +
Sbjct: 59474 FTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPS-GGRPDEGTEEETEVIIIEVDEE 59298
Query: 558 TASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV 607
V A A+V+P +L L +L + VF F+R GTPR +LYC+RS+ + V
Sbjct: 59297 GGGAVSAAAVVLPVLLLLLVLAVGLAVFFFRRHGTPRRLLYCQRSLLDKV 59148
Score = 99.4 bits (246), Expect = 9e-19
Identities = 50/88 (56%), Positives = 62/88 (69%), Gaps = 9/88 (10%)
Frame = -3
Query: 213 GPGIGGDTHFDSDEPWTLGN---------PNHDGNDLFLVAVHELGHALGLEHSNDPTAI 263
G +GG+T E L P GND+FLVAVHELGHALGLEHS+DP+AI
Sbjct: 62027 GSRLGGETKAAGGEAGRLREGTQAAIVTVPILPGNDIFLVAVHELGHALGLEHSSDPSAI 61848
Query: 264 MAPFYQYMETDNFKLPNDDLQGIQKIYG 291
MAPFYQ+M+T+NF LP+DD +GIQ++YG
Sbjct: 61847 MAPFYQWMDTENFVLPDDDRRGIQQLYG 61764
Score = 63.9 bits (154), Expect = 4e-08
Identities = 26/52 (50%), Positives = 40/52 (76%)
Frame = -2
Query: 42 NVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTI 93
+++ WLQ+YGYLPP D R RS +++ +A+AAMQ+FYG+ +TGK D +T+
Sbjct: 63702 SLQAWLQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTM 63547
Score = 57.4 bits (137), Expect = 4e-06
Identities = 23/39 (58%), Positives = 29/39 (73%)
Frame = -2
Query: 96 MKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITY 134
M++PRCGVPD+ K N+RRKRYA+ G KWQH IT+
Sbjct: 63267 MRRPRCGVPDKFGAEIKANVRRKRYAIQGLKWQHNEITF 63151
Score = 55.1 bits (131), Expect = 2e-05
Identities = 21/44 (47%), Positives = 33/44 (74%)
Frame = -1
Query: 454 FKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENG 497
F RY+R++EE++ +D YPK I +W+GIPESP+G+F+ + G
Sbjct: 59947 FPFPRYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEG 59816
Score = 43.1 bits (100), Expect = 0.079
Identities = 18/22 (81%), Positives = 21/22 (94%)
Frame = -3
Query: 340 PNICDGNFNTLAILRREMFVFK 361
PNICDGNF+T+A+LR EMFVFK
Sbjct: 61379 PNICDGNFDTVAMLRGEMFVFK 61314
>dbj|AB007817.1|AB007817 Caenorhabditis elegans mRNA for matrix metalloproteinase, complete
cds
Length = 1736
Score = 147 bits (371), Expect = 3e-33
Identities = 130/506 (25%), Positives = 207/506 (40%), Gaps = 19/506 (3%)
Frame = +1
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
+LQKYGYL D ++S +E++ AL MQ+ G+ TG++D TI M++PRCG PD
Sbjct: 127 FLQKYGYLTSGDNQLS----SESLSDALKNMQRMAGLEETGELDERTIQMMERPRCGHPD 294
Query: 106 QTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNV--TPKVGDPETRRAIRRAFDVWQNVT 163
R KRYA KW+ K ITY K V + ++ + RR + +A W +
Sbjct: 295 VEDHQKS---RGKRYAPPQFKWKEKIITYGCKAVGTSTRISLDDLRRTMHQAASQWSELA 465
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
+ E+ S ++N + +I A + + LAHA+FP G H +
Sbjct: 466 DV---EIVESSVKN-----PMMVISAGRENHYPCTVRFDTKTLAHAFFP---TNGQIHIN 612
Query: 224 SDEPWTLGNPNH--DGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
+ + N N L+ V HE+GHALG HS D ++M + Y +K +
Sbjct: 613 DRVQFAMTNYTERMGANSLYSVVAHEMGHALGFSHSPDIDSVM---FAYDTPRKWKFTSM 783
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPN 341
D ++ YG +PN
Sbjct: 784 DKYNMRSYYG--------AKASKKENEEEERKTENEDKRRKTEKDRGRTREHESDDIRPN 939
Query: 342 ICDGNFNTLAILRREMFVFKDQWFWRVRNN---RVMDGYPMQITYFWRGLPPSIDAVYEN 398
C + R E +FK QW WRV ++ ++ P I + GLP IDA
Sbjct: 940 ECRVENPIVVQYRGEYLIFKSQWVWRVSSDWKRLIIKAVP--INQLFPGLPNPIDAAVT- 1110
Query: 399 SDGNFVFFKGNKYWVFKDTTLQPGYPHDLI-----TLGNGIPPHGIDSAIWWE--DVGKT 451
G+ WVF + Y + ++ GI +D A W +
Sbjct: 1111--------VGHNLWVFVGEMIYVIYGNHMVHAPLRLSDIGINEKYVDLAYEWHYFNPPAV 1266
Query: 452 YFFKGDRYWRYSEEM--KTMDPGYPKPITI-WKGIPESPQGAFVHKENGFTYFYKGKEYW 508
Y +KG RYW+ E+M + +D YPK + W +P+ AF +++ + +G + +
Sbjct: 1267YIWKGSRYWKLDEKMYHRRVDERYPKDTDLNWARVPKGVHSAFTYEKE--IHLLRGNQVF 1440
Query: 509 KFNN--QILKVEPGYPRSILKDFMGC 532
+ N+ + + GYP+ + F C
Sbjct: 1441RMNSSRSVFDIADGYPQPLQSFFGFC 1518
>emb|AJ251531.1|HSA251531 Homo sapiens mRNA for matrilysin-2 (MMP26 gene)
Length = 995
Score = 143 bits (360), Expect = 6e-32
Identities = 86/224 (38%), Positives = 118/224 (52%)
Frame = +1
Query: 68 TMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKW 127
T ++ +QQF+ N T +D + +P CGVPD S +I R KW
Sbjct: 163 TQETQTQLLQQFHR-NGTDLLDMQMHALLHQPHCGVPD----GSDTSISPGRC-----KW 312
Query: 128 QHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
+TY I N + + +I A +W NVTPL F++V +NG D DI +
Sbjct: 313 NKHTLTYRIINYPHDMKPSAVKDSIYNAVSIWSNVTPLIFQQV-----QNG--DADIKVS 471
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHE 247
F H D PFDG GG L HA+ P G G HFD +E W+ + G +LFLVA HE
Sbjct: 472 FWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWSASDT---GYNLFLVATHE 642
Query: 248 LGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
+GH+LGL+HS + ++IM P Y Y + F+L DD+Q IQ +YG
Sbjct: 643 IGHSLGLQHSGNQSSIMYPTYWYHDPRTFQLSADDIQRIQHLYG 774
>gb|AF248646.1|AF248646 Homo sapiens matrix metalloproteinase-26 precursor (MMP26) mRNA,
complete cds
Length = 999
Score = 143 bits (360), Expect = 6e-32
Identities = 86/224 (38%), Positives = 118/224 (52%)
Frame = +1
Query: 68 TMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKW 127
T ++ +QQF+ N T +D + +P CGVPD S +I R KW
Sbjct: 157 TQETQTQLLQQFHR-NGTDLLDMQMHALLHQPHCGVPD----GSDTSISPGRC-----KW 306
Query: 128 QHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
+TY I N + + +I A +W NVTPL F++V +NG D DI +
Sbjct: 307 NKHTLTYRIINYPHDMKPSAVKDSIYNAVSIWSNVTPLIFQQV-----QNG--DADIKVS 465
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHE 247
F H D PFDG GG L HA+ P G G HFD +E W+ + G +LFLVA HE
Sbjct: 466 FWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWSASDT---GYNLFLVATHE 636
Query: 248 LGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
+GH+LGL+HS + ++IM P Y Y + F+L DD+Q IQ +YG
Sbjct: 637 IGHSLGLQHSGNQSSIMYPTYWYHDPRTFQLSADDIQRIQHLYG 768
>ref|XM_051704.1| Homo sapiens matrix metalloproteinase 26 (MMP26), mRNA
Length = 989
Score = 143 bits (360), Expect = 6e-32
Identities = 86/224 (38%), Positives = 118/224 (52%)
Frame = +1
Query: 68 TMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKW 127
T ++ +QQF+ N T +D + +P CGVPD S +I R KW
Sbjct: 166 TQETQTQLLQQFHR-NGTDLLDMQMHALLHQPHCGVPD----GSDTSISPGRC-----KW 315
Query: 128 QHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
+TY I N + + +I A +W NVTPL F++V +NG D DI +
Sbjct: 316 NKHTLTYRIINYPHDMKPSAVKDSIYNAVSIWSNVTPLIFQQV-----QNG--DADIKVS 474
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHE 247
F H D PFDG GG L HA+ P G G HFD +E W+ + G +LFLVA HE
Sbjct: 475 FWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWSASDT---GYNLFLVATHE 645
Query: 248 LGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
+GH+LGL+HS + ++IM P Y Y + F+L DD+Q IQ +YG
Sbjct: 646 IGHSLGLQHSGNQSSIMYPTYWYHDPRTFQLSADDIQRIQHLYG 777
>ref|NM_021801.2| Homo sapiens matrix metalloproteinase 26 (MMP26), mRNA
Length = 1009
Score = 143 bits (360), Expect = 6e-32
Identities = 86/224 (38%), Positives = 118/224 (52%)
Frame = +1
Query: 68 TMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKW 127
T ++ +QQF+ N T +D + +P CGVPD S +I R KW
Sbjct: 166 TQETQTQLLQQFHR-NGTDLLDMQMHALLHQPHCGVPD----GSDTSISPGRC-----KW 315
Query: 128 QHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
+TY I N + + +I A +W NVTPL F++V +NG D DI +
Sbjct: 316 NKHTLTYRIINYPHDMKPSAVKDSIYNAVSIWSNVTPLIFQQV-----QNG--DADIKVS 474
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHE 247
F H D PFDG GG L HA+ P G G HFD +E W+ + G +LFLVA HE
Sbjct: 475 FWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWSASDT---GYNLFLVATHE 645
Query: 248 LGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
+GH+LGL+HS + ++IM P Y Y + F+L DD+Q IQ +YG
Sbjct: 646 IGHSLGLQHSGNQSSIMYPTYWYHDPRTFQLSADDIQRIQHLYG 777
>gb|AF291664.1|AF291664 Homo sapiens matrix metalloproteinase-26 (MMP26) mRNA, complete cds
Length = 998
Score = 143 bits (360), Expect = 6e-32
Identities = 86/224 (38%), Positives = 118/224 (52%)
Frame = +1
Query: 68 TMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKW 127
T ++ +QQF+ N T +D + +P CGVPD S +I R KW
Sbjct: 166 TQETQTQLLQQFHR-NGTDLLDMQMHALLHQPHCGVPD----GSDTSISPGRC-----KW 315
Query: 128 QHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
+TY I N + + +I A +W NVTPL F++V +NG D DI +
Sbjct: 316 NKHTLTYRIINYPHDMKPSAVKDSIYNAVSIWSNVTPLIFQQV-----QNG--DADIKVS 474
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHE 247
F H D PFDG GG L HA+ P G G HFD +E W+ + G +LFLVA HE
Sbjct: 475 FWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWSASDT---GYNLFLVATHE 645
Query: 248 LGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
+GH+LGL+HS + ++IM P Y Y + F+L DD+Q IQ +YG
Sbjct: 646 IGHSLGLQHSGNQSSIMYPTYWYHDPRTFQLSADDIQRIQHLYG 777
>gb|AF230354.1|AF230354 Homo sapiens matrix metalloproteinase MMP-26 mRNA, complete cds
Length = 994
Score = 142 bits (358), Expect = 1e-31
Identities = 86/224 (38%), Positives = 118/224 (52%)
Frame = +3
Query: 68 TMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKW 127
T ++ +QQF+ N T +D + +P CGVPD S +I R KW
Sbjct: 153 TQETQTQLLQQFHR-NGTDLLDIQMHALLHQPHCGVPD----GSDTSISPGRC-----KW 302
Query: 128 QHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
+TY I N + + +I A +W NVTPL F++V +NG D DI +
Sbjct: 303 NKHTLTYRIINYPHDMKPSAVKDSIYNAVSIWSNVTPLIFQQV-----QNG--DADIKVS 461
Query: 188 FASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHE 247
F H D PFDG GG L HA+ P G G HFD +E W+ + G +LFLVA HE
Sbjct: 462 FWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWSASDT---GYNLFLVATHE 632
Query: 248 LGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
+GH+LGL+HS + ++IM P Y Y + F+L DD+Q IQ +YG
Sbjct: 633 IGHSLGLQHSGNQSSIMYPTYWYHDPRTFQLSADDIQRIQHLYG 764
>gb|AF022427.1|MM14MMP4 Mus musculus matrix metalloproteinase-14 (Mmp14), exon 4
Length = 555
Score = 142 bits (357), Expect = 1e-31
Identities = 65/104 (62%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Frame = +2
Query: 135 SIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENG-KRDVDITIIFASGFH 193
SI+N T K G+ T IR+AF VW++ TPL F EVPY+ + G ++ DI I+FA GFH
Sbjct: 29 SIQNYTSKXGEXXTFEXIRKAFRVWESATPLRFREVPYAYIREGHEKQADIMILFAEGFH 208
Query: 194 GDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDG 237
GDS+PFDGEGGFLAHAYFPGP IGGDTHFDS EPWT+ N + +G
Sbjct: 209 GDSTPFDGEGGFLAHAYFPGPNIGGDTHFDSAEPWTVQNEDLNG 340
>dbj|AB057407.1|AB057407 Cyprinus carpio mRNA for matrix metalloproteinase 9, complete cds
Length = 2867
Score = 142 bits (357), Expect = 1e-31
Identities = 83/189 (43%), Positives = 105/189 (54%)
Frame = +3
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L++YGY+ + S L++ + AL +QQ G+ TG +D+ TID MK+PRCGV
Sbjct: 279 EEYLKRYGYIDVL--QKSGLQAVVSTSKALMKLQQQLGLEETGSLDQPTIDAMKQPRCGV 452
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVT 163
PD IR + KW H +TY I N +P + P A RAF VW +VT
Sbjct: 453 PD---------IRNYQTFEGDLKWDHTDVTYRILNYSPDMEAPLIDDAFARAFKVWSDVT 605
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PLTF + L +G DI I F HGD PFDG+ G L HAY PG GI GD HFD
Sbjct: 606 PLTF-----TRLYDGT--ADIMISFGRENHGDPYPFDGKDGLLVHAYPPGEGIQGDAHFD 764
Query: 224 SDEPWTLGN 232
DE WTLG+
Sbjct: 765 DDEYWTLGS 791
Score = 123 bits (308), Expect = 6e-26
Identities = 85/307 (27%), Positives = 138/307 (44%), Gaps = 3/307 (0%)
Frame = +3
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
+++D+D+ W G G LFLVA HE GHALGL+HS A+M P Y+Y+E +F L
Sbjct: 1275 SNYDTDKKW--GFCPDKGYSLFLVAAHEFGHALGLDHSKIKDALMYPMYKYIE--DFSLN 1442
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAK 339
DD++GIQ +YG V G
Sbjct: 1443 QDDIEGIQYLYGPKTGPNPTPPKPKTTTSSPVVPTKPTPSEKTTTVSTTTHV-----GPS 1607
Query: 340 PNICD-GNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYEN 398
+ C+ F+ + +++E+ FKD+ +W++ +N G P I+ W LP +I++ +E
Sbjct: 1608 QDACEIKEFDAITEIQKELHFFKDRHYWKISSNGERKG-PFFISEKWPALPATINSAFEE 1784
Query: 399 S-DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGD 457
FF ++WV+ T + P + LG ++ + GK F G
Sbjct: 1785 PLTKKIYFFADKQFWVY--TGKEVLGPRKIEKLGLPSDLDRVEGTV-QRGKGKVLLFNGV 1955
Query: 458 RYWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILK 516
+W+ + + +D GYP+ +++ G+P F+HK GF YF + YW+ N +
Sbjct: 1956 NFWKLDVKAQMIDSGYPRSTDSVFGGVPIDSHDVFLHK--GFFYFCRESFYWRMNAKRQV 2129
Query: 517 VEPGYPR 523
GY R
Sbjct: 2130 DRVGYVR 2150
>gb|U82541.1|XLU82541 Xenopus laevis matrix metalloproteinase (XMMP) mRNA, complete cds
Length = 3127
Score = 140 bits (354), Expect = 3e-31
Identities = 145/537 (27%), Positives = 210/537 (39%), Gaps = 84/537 (15%)
Frame = +2
Query: 57 DPRMSVLRSAETMQ--SALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD--------- 105
+PR V ++ Q AL Q+ + +TG +D TI+ M KPRCGVPD
Sbjct: 341 NPRQEVAEPTKSPQFIDALKKFQKLNNLPVTGTLDDATINAMNKPRCGVPDNQMAKKETE 520
Query: 106 ----------QTRGSSKFN--------IRRKRYA------------------LTGQKWQH 129
+T+ S IRRKR+ TG+ +
Sbjct: 521 KPTAAQSLENKTKDSENVTQQNPDPPKIRRKRFLDMLMYSNKYREEQEALQKSTGKVFTK 700
Query: 130 KHITYSI--KNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITII 187
K + + + + + ++ E R R AF +W V PL FEE S L +DI +
Sbjct: 701 KLLKWRMIGEGYSNQLSINEQRYVFRLAFRMWSEVMPLDFEEDNTSPLSQ----IDIKLG 868
Query: 188 FASGFH-GDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVH 246
F G H G S FDG G AHA+F G D HFD DE +T + H G L VA H
Sbjct: 869 FGRGRHLGCSRAFDGSGQEFAHAWFLG-----DIHFDDDEHFTAPSSEH-GISLLKVAAH 1030
Query: 247 ELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGXXXXXXXXXXXXXXX 306
E+GH LGL H + +IM P Y + F+L D + IQ +YG
Sbjct: 1031EIGHVLGLSHIHRVGSIMQPNY-IPQDSGFELDLSDRRAIQNLYGS-------------- 1165
Query: 307 XXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTL-------------AIL 353
C+G F+T ++
Sbjct: 1166------------------------------------CEGPFDTAFDWIYKEKNQYGELVV 1237
Query: 354 RREMFVFKDQWFWRV--RNNRVMDGYPMQITYFWRGLP-PSIDA---VYENSDGNFVFFK 407
R + F++ W+W R+NR G P+ I W G+P +IDA V+ + FFK
Sbjct: 1238RYNTYFFRNSWYWMYENRSNRTRYGDPLAIANGWHGIPVQNIDAFVHVWTWTRDASYFFK 1417
Query: 408 GNKYWVFKDTTLQPGYPHD--------LITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
G +YW + D+ Y D LI+ G P I++A + YFF+ +
Sbjct: 1418GTQYWRY-DSENDKAYAEDAQGKSYPRLISEGFPGIPSPINAAYFDRRRQYIYFFRDSQV 1594
Query: 460 WRYSEEMKTMDPGYPKPITIW---KGIPESPQGAFVHKENGFTY----FYKGKEYWK 509
+ + + P +PK I + P+G +TY +KGKE+WK
Sbjct: 1595FAFDINRNRVAPDFPKRILDFFPAVAANNHPKGNIDVAYYSYTYSSLFLFKGKEFWK 1765
Score = 64.3 bits (155), Expect = 3e-08
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 13/141 (9%)
Frame = +2
Query: 402 NFVFFKGNKYWVFKDTTLQPGYPHDLITLG--NGIPPHGIDSAI----WWEDVGKTYFFK 455
N FF+ + YW++++ + + Y L +GIP ID+ + W D +YFFK
Sbjct: 1244 NTYFFRNSWYWMYENRSNRTRYGDPLAIANGWHGIPVQNIDAFVHVWTWTRDA--SYFFK 1417
Query: 456 GDRYWRYSEE------MKTMDPGYPKPITI-WKGIPESPQGAFVHKENGFTYFYKGKEYW 508
G +YWRY E YP+ I+ + GIP A+ + + YF++ + +
Sbjct: 1418 GTQYWRYDSENDKAYAEDAQGKSYPRLISEGFPGIPSPINAAYFDRRRQYIYFFRDSQVF 1597
Query: 509 KFNNQILKVEPGYPRSILKDF 529
F+ +V P +P+ IL F
Sbjct: 1598 AFDINRNRVAPDFPKRILDFF 1660
>gb|AF072455.1|AF072455 Xenopus laevis gelatinase B (MMP-9) mRNA, complete cds
Length = 3451
Score = 140 bits (354), Expect = 3e-31
Identities = 84/197 (42%), Positives = 105/197 (52%), Gaps = 1/197 (0%)
Frame = +1
Query: 36 GTEQYFNVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDW 95
GT E +L ++GYL + S T+Q+AL MQQ G+ TG +D T++
Sbjct: 184 GTTDMELAESYLLQFGYL------IQEQGSNATLQNALTIMQQKLGLKETGVLDAETLEA 345
Query: 96 MKKPRCGVPDQTRGSSKFNIRRKRYALTGQ-KWQHKHITYSIKNVTPKVGDPETRRAIRR 154
MK+PRCGVPD +FN G KW H ITY I N +P + A R
Sbjct: 346 MKRPRCGVPD----IGQFN------TFEGDLKWDHNDITYRILNYSPDLDPEVIDDAFAR 495
Query: 155 AFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGP 214
AF VW +VTPL+F + E DI I+F + HGD PFD + G LAHAY PGP
Sbjct: 496 AFKVWSDVTPLSFTRIYSGE-------PDINILFGTEDHGDPYPFDRKDGLLAHAYPPGP 654
Query: 215 GIGGDTHFDSDEPWTLG 231
G+ GD HFD DE WTLG
Sbjct: 655 GVQGDAHFDDDEFWTLG 705
Score = 66.2 bits (160), Expect = 9e-09
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = +1
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
+++D D W G G LFLVA HE GHALGL+HS+ A+M P Y Y++ +F+L
Sbjct: 1192 SNYDLDSKW--GFCPDQGYSLFLVAAHEFGHALGLDHSDVQDALMYPMYSYVK--DFQLH 1359
Query: 280 NDDLQGIQKIYG 291
DD++GIQ +YG
Sbjct: 1360 QDDVRGIQFLYG 1395
Score = 57.8 bits (138), Expect = 3e-06
Identities = 36/136 (26%), Positives = 63/136 (45%), Gaps = 2/136 (1%)
Frame = +1
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIP--PHGIDSAIWWEDVGKTYFFKGDR 458
G FFK YW T P + + + P P ID+A +FF G +
Sbjct: 1555 GALHFFKDGLYWTL--TPRSKNSPQSPLRISDTWPALPSKIDTAFQDPTSKSIFFFSGSK 1728
Query: 459 YWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVE 518
+W+Y+ + P + + + K + E+ G+F ++NG + G++YW+ N + L ++
Sbjct: 1729 FWQYTGT-SAIGPRSIEKLGLSKDV-EAIMGSFA-RDNGKALLFNGEQYWRLNLKTLTID 1899
Query: 519 PGYPRSILKDFMGCDG 534
GYPR ++ G G
Sbjct: 1900 NGYPRQTADNYPGVPG 1947
>emb|X76537.1|MMSROM2 Mus musculus mRNA for stromelysin-2
Length = 683
Score = 140 bits (352), Expect = 5e-31
Identities = 86/256 (33%), Positives = 127/256 (49%), Gaps = 5/256 (1%)
Frame = +3
Query: 228 WTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETD-NFKLPNDDLQGI 286
WTL G +LFLVA HELGH+LGL HS+ ++M P Y++ + NF L DD++GI
Sbjct: 3 WTLAP---SGTNLFLVAAHELGHSLGLFHSDKKESLMYPVYRFSTSPANFHLSQDDIEGI 173
Query: 287 QKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDG- 345
Q +YG CD
Sbjct: 174 QSLYGAGPSSDATVVPVLSVSPRPETTDK---------------------------CDPA 272
Query: 346 -NFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE--NSDGN 402
+F+++ LR E+ FKD++FWR + + + I+ FW LP +DA YE N+D +
Sbjct: 273 LSFDSVNTLRGEVLFFKDRYFWRRSHWNPEPEFHL-ISAFWPTLPSDLDAAYEAHNTD-S 446
Query: 403 FVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRY 462
+ FKG+++W + +Q GYP + TLG ID+A++ ++ KTYFF GD+YWR+
Sbjct: 447 VLIFKGSQFWAVRGNEVQAGYPKGIHTLGFPPTVKKIDAAVFEKEKKKTYFFVGDKYWRF 626
Query: 463 SEEMKTMDPGYPKPIT 478
E MD G+P+ IT
Sbjct: 627 DETRHVMDKGFPRQIT 674
Score = 55.5 bits (132), Expect = 2e-05
Identities = 38/132 (28%), Positives = 59/132 (43%), Gaps = 3/132 (2%)
Frame = +3
Query: 401 GNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYW 460
G +FFK +W +P + LI+ P +D+A + FKG ++W
Sbjct: 303 GEVLFFKDRYFWRRSHWNPEPEF--HLISAFWPTLPSDLDAAYEAHNTDSVLIFKGSQFW 476
Query: 461 RYSEEMKTMDPGYPKPITIWKGIPESPQ---GAFVHKENGFTYFYKGKEYWKFNNQILKV 517
+ + GYPK I G P + + A KE TYF+ G +YW+F+ +
Sbjct: 477 --AVRGNEVQAGYPKGIHTL-GFPPTVKKIDAAVFEKEKKKTYFFVGDKYWRFDETRHVM 647
Query: 518 EPGYPRSILKDF 529
+ G+PR I DF
Sbjct: 648 DKGFPRQITDDF 683
>dbj|D82052.1|D82052 Cynops pyrrhogaster mRNA for gelatinase-b, complete cds
Length = 3885
Score = 139 bits (350), Expect = 8e-31
Identities = 76/189 (40%), Positives = 106/189 (55%), Gaps = 1/189 (0%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+++GY+ + + + ++ AL MQ+ G+N TG++D++T++ MK PRCGV
Sbjct: 209 ESYLERFGYIS----KRARSSTHVSLSKALLQMQKKLGLNETGELDQSTLEAMKTPRCGV 376
Query: 104 PDQTRGSSKFNIRRKRYALTGQ-KWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNV 162
PD + G KW H IT+ + N +P + A RRAF VW +V
Sbjct: 377 PDVGNFQT----------FDGDLKWDHNDITFRVLNYSPDLDGDVIEDAFRRAFKVWSDV 526
Query: 163 TPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
+PLTF ++ E DI I+F S HGD PFDG+ G LAHAY PG G+ GD HF
Sbjct: 527 SPLTFTQIYSGE-------ADIMILFGSDDHGDPYPFDGKDGLLAHAYPPGEGVQGDAHF 685
Query: 223 DSDEPWTLG 231
D DE WTLG
Sbjct: 686 DDDEFWTLG 712
Score = 122 bits (306), Expect = 1e-25
Identities = 88/315 (27%), Positives = 138/315 (42%), Gaps = 4/315 (1%)
Frame = +2
Query: 222 FDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPND 281
+DSD W G G LFLV HE GHA+GLEHS A+M P ++Y+E F+L D
Sbjct: 1205 YDSDRKW--GFCPDQGYSLFLVGAHEFGHAIGLEHSTVRDALMYPMFRYIE--GFQLHQD 1372
Query: 282 DLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPN 341
D++G+Q +YG S K
Sbjct: 1373 DIEGVQYLYGSGTGPHPSPPMPTTKSPDVSGKTTTTVTTSPTTTTELVPVDPTTDACKVK 1552
Query: 342 ICDGNFNTLAILRREMFVFKDQWFWRVRNNR--VMDGYPMQITYFWRGLPPSIDAVYENS 399
F+ + + ++ FKD +W+ + R + G P++I+ W LP ID+ +E+
Sbjct: 1553 A----FDAITEIEGQLHFFKDGKYWKASSARPGAIKG-PVKISDTWPALPAIIDSAFEDL 1717
Query: 400 -DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDR 458
FF G ++WV+ TT+ P L LG G I ++ GK F GD+
Sbjct: 1718 LTKKIFFFSGRRFWVYTGTTVLG--PRGLEKLGIGKDVEKIVGSLQ-RGRGKVLLFNGDK 1888
Query: 459 YWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKV 517
YWR + + +D GYP+ + G+P + F+++EN +F K + YW+ +
Sbjct: 1889 YWRLDVKTQVVDKGYPRDTEDAFAGVPINAHDVFLYQEN--IHFCKDQFYWRMTPRRQVD 2062
Query: 518 EPGYPRSILKDFMGC 532
+ GY + D + C
Sbjct: 2063 QVGY---VKYDILNC 2098
>dbj|AB057753.1|AB057753 Paralichthys olivaceus MMP9 mRNA for gelatinase, complete cds
Length = 2802
Score = 139 bits (350), Expect = 8e-31
Identities = 79/189 (41%), Positives = 101/189 (52%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+++GYL S +S + AL MQ+ G+ TGK+D++T++ MK+PRCGV
Sbjct: 311 ETYLKRFGYLDKM--HRSGFQSMVSTAKALKMMQRQMGLKETGKLDKSTLEAMKQPRCGV 484
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVT 163
PD + + KW H +TY N +P + A RAF VW +VT
Sbjct: 485 PD---------VANYQTFEGDLKWDHNDVTYRTLNYSPDMESSLIDDAFARAFKVWSDVT 637
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PLTF + L G DI I F HGD PFDG G LAHAY PG G+ GD HFD
Sbjct: 638 PLTF-----TRLYEGT--ADIMISFGKADHGDPYPFDGRNGLLAHAYPPGEGVQGDAHFD 796
Query: 224 SDEPWTLGN 232
DE WTLGN
Sbjct: 797 DDEHWTLGN 823
Score = 118 bits (295), Expect = 2e-24
Identities = 85/306 (27%), Positives = 136/306 (43%), Gaps = 5/306 (1%)
Frame = +2
Query: 221 HFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPN 280
++D D W G + +G LFLVA HE GHALGL+HSN A+M P Y Y+E +F L
Sbjct: 1310 NYDEDAKW--GFCDDEGYSLFLVAAHEFGHALGLDHSNIREALMYPMYTYVE--DFSLHK 1477
Query: 281 DDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKP 340
DD++GIQ +YG +
Sbjct: 1478 DDIEGIQYLYGRGTGPDPTPPQPTSTTTTPNPTEEPEPTTPQPVDPTRDACKLT------ 1639
Query: 341 NICDGNFNTLAILRREMFVFKDQWFWRV--RNNRVMDGYPMQITYFWRGLPPSIDAVYEN 398
F+T+ ++ E+ F++ +W++ R + + G P ++ W LP ID+ +E+
Sbjct: 1640 -----KFDTITMIENELHFFENGNYWKMPSRGDGGLKG-PFSLSERWPALPAVIDSAFED 1801
Query: 399 S-DGNFVFFKGNKYWVF-KDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKG 456
N FF GN++WV+ K+ L P + LG ++ A+ GK F
Sbjct: 1802 LLTKNMYFFSGNRFWVYTKEGVLGP---RSIEKLGLPTSIQKVEGALQ-RGKGKVLLFTE 1969
Query: 457 DRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQIL 515
+ +W++ + + MD GYPK ++ G+P F +K G YF + YW+ N++
Sbjct: 1970 ESFWKFDLKSQKMDKGYPKSTDYVFGGVPNDAHDVFQYK--GHMYFCRDSFYWRMNSRRQ 2143
Query: 516 KVEPGY 521
GY
Sbjct: 2144 VDRVGY 2161
>gb|U63725.1|GMU63725 Glycine max metalloproteinase mRNA, complete cds
Length = 1196
Score = 139 bits (349), Expect = 1e-30
Identities = 99/261 (37%), Positives = 131/261 (49%), Gaps = 11/261 (4%)
Frame = +3
Query: 42 NVEVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
NV+ + GY+P P +T+ SA+ Q+ Y +N+TGK D NT+ + PRC
Sbjct: 210 NVKNYFHHLGYIPNA-PHFDD-NFDDTLVSAIKTYQKNYNLNVTGKFDINTLKQIMTPRC 383
Query: 102 GVPD---QTRGSSKFN-IRRKRYALTGQKWQ--HKHITYSIKNVTPKVGDPETRRAIRRA 155
GVPD T ++ F I + +WQ +TY+ + P++ D + AI RA
Sbjct: 384 GVPDIIINTNKTTSFGMISDYTFFKDMPRWQAGTTQLTYAF-SPEPRL-DDTFKSAIARA 557
Query: 156 FDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPG 215
F W V + F+E E N I I+FAS HGD PFDG GG L HA+ P
Sbjct: 558 FSKWTPVVNIAFQETTSYETAN------IKILFASKNHGDPYPFDGPGGILGHAFAP--- 710
Query: 216 IGGDTHFDSDEPWTLG-----NPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQY 270
G HFD+DE W +P DL VAVHE+GH LGL HS+D AIM P
Sbjct: 711 TDGRCHFDADEYWVASGDVTKSPVTSAFDLESVAVHEIGHLLGLGHSSDLRAIMYPSIP- 887
Query: 271 METDNFKLPNDDLQGIQKIYG 291
T L DD+ GI+K+YG
Sbjct: 888 PRTRKVNLAQDDIDGIRKLYG 950
>dbj|AB031324.1|AB031324 Sus scrofa mRNA for matrilysin-related protein, complete cds
Length = 1198
Score = 138 bits (347), Expect = 2e-30
Identities = 68/140 (48%), Positives = 88/140 (62%)
Frame = +2
Query: 152 IRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYF 211
+ +A +W N PL+F++V + DI I FA G HGD+ PFDG G LAHA+
Sbjct: 479 VTKALKMWSNEIPLSFKKVSWGI-------ADIIIGFARGAHGDAYPFDGPGNTLAHAFA 637
Query: 212 PGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYM 271
PGPG+GGD HFD DE W+ G G + A HELGH+LGL HS+DP A+M P Y +
Sbjct: 638 PGPGLGGDAHFDEDEHWSDG--GSIGINFLYAATHELGHSLGLAHSSDPNAVMYPTYGEV 811
Query: 272 ETDNFKLPNDDLQGIQKIYG 291
+ +FKL DD+ GIQK+YG
Sbjct: 812 YSKDFKLSQDDINGIQKLYG 871
Score = 54.3 bits (129), Expect = 3e-05
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +3
Query: 46 WLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPD 105
W Q GYL P S + A ++++ L MQ+F+ + +TG ++ + I M+KPRCGVPD
Sbjct: 102 WEQAQGYLKKFYPSNSKTKDANSLEAKLKQMQKFFRLPITGMLNSHIIKIMQKPRCGVPD 281
Query: 106 QTRGSSKFNIRRKRYAL--TGQKWQHKHITYSI 136
Y+L + KW K +TY +
Sbjct: 282 VA-----------EYSLFPSQPKWTSKIVTYRL 347
>dbj|AB054185.1|AB054185 Cynops pyrrhogaster mRNA for matrix metalloproteinase-21, complete
cds
Length = 3216
Score = 137 bits (346), Expect = 2e-30
Identities = 146/567 (25%), Positives = 218/567 (37%), Gaps = 89/567 (15%)
Frame = +1
Query: 47 LQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106
+ +YG P +P A AL Q G+ TGK+D +TI M KPRCGVPD
Sbjct: 304 ISRYGQEFPLEPTQ-----APAFVEALRKFQTLNGLPATGKLDDSTIAAMNKPRCGVPDN 468
Query: 107 T---------------------------------RGSSKFNIRRKRY------------- 120
G+S IR+KR+
Sbjct: 469 QIGKESAIVKSNSNNVTEKASGKSLNTTTNQNPENGTSTSKIRKKRFLQMLAAPVRYKDQ 648
Query: 121 ----ALTGQKWQHKHITYSI--KNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSE 174
+ + K + + + + + ++ E R + AF +W V PL FEE +
Sbjct: 649 ANQGSTVRGAFSKKLLKWRLIGEGYSSQLSIDEQRYVFKTAFRMWSEVMPLDFEE----D 816
Query: 175 LENGKRDVDITIIFASGFH-GDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNP 233
L + +D+ + F G H G + FDG G AHA+F G D HFD DE +T P
Sbjct: 817 LTSPMSLIDVKLGFGRGRHLGCTRSFDGSGQEFAHAWFLG-----DIHFDDDEHFTA--P 975
Query: 234 NHD-GNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGX 292
+ D G L VAVHE+GH LGL H +IM P Y E F+L D + IQ +YG
Sbjct: 976 SSDSGISLLKVAVHEIGHVLGLSHIYQTGSIMQPNYIPQEA-GFELDWTDRKAIQMLYGT 1152
Query: 293 XXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNTL-- 350
C+G+F+ +
Sbjct: 1153--------------------------------------------------CEGSFDAVFD 1182
Query: 351 -----------AILRREMFVFKDQWFWRVRN--NRVMDGYPMQITYFWRGLP-PSIDA-- 394
+LR + F++ W+W N NR G P+ ++ W G+P IDA
Sbjct: 1183WIWKERNQYGELVLRYNTYFFRNAWYWLYENRKNRTRYGDPVTVSLGWHGIPAEGIDAFV 1362
Query: 395 -VYENSDGNFVFFKGNKYWVFKDTTLQPGYPHD--------LITLGNGIPPHGIDSAIWW 445
V+ ++ FFKG +YW + D+ Y D LI+ G P I++A +
Sbjct: 1363HVWTWTEDATYFFKGTQYWRY-DSENDQAYIKDAQGNQYPRLISEGFPKIPSPINTAFFD 1539
Query: 446 EDVGKTYFFKGDRYWRYSEEMKTMDPGYPK------PITIWKGIP-ESPQGAFVHKENGF 498
YFFK + + + + YPK P + P + A+ +
Sbjct: 1540RRDQFIYFFKDAHVYAFDVKRNMVANHYPKRIIDVFPAVVRNNHPFGNIDAAYYAYTHNS 1719
Query: 499 TYFYKGKEYWK-FNNQILKVEPGYPRS 524
+ +KGKEYWK +++ + P PR+
Sbjct: 1720IFLFKGKEYWKVVSDKDRQQNPKLPRN 1800
Score = 66.6 bits (161), Expect = 7e-09
Identities = 48/144 (33%), Positives = 71/144 (48%), Gaps = 16/144 (11%)
Frame = +1
Query: 402 NFVFFKGNKYWVFKDTTLQPGYPHDL-ITLG-NGIPPHGIDSAI----WWEDVGKTYFFK 455
N FF+ YW++++ + Y + ++LG +GIP GID+ + W ED TYFFK
Sbjct: 1231 NTYFFRNAWYWLYENRKNRTRYGDPVTVSLGWHGIPAEGIDAFVHVWTWTEDA--TYFFK 1404
Query: 456 GDRYWRYSEEMKTMDPGYPK-------PITIWKGIPESP---QGAFVHKENGFTYFYKGK 505
G +YWRY E D Y K P I +G P+ P AF + + F YF+K
Sbjct: 1405 GTQYWRYDSE---NDQAYIKDAQGNQYPRLISEGFPKIPSPINTAFFDRRDQFIYFFKDA 1575
Query: 506 EYWKFNNQILKVEPGYPRSILKDF 529
+ F+ + V YP+ I+ F
Sbjct: 1576 HVYAFDVKRNMVANHYPKRIIDVF 1647
>gb|AF222690.1|AF222690 Gallus gallus 75 kDa gelatinase mRNA, complete cds
Length = 2483
Score = 137 bits (346), Expect = 2e-30
Identities = 79/189 (41%), Positives = 105/189 (54%), Gaps = 1/189 (0%)
Frame = +1
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L ++GY+ + R S ++ AL MQ+ G+ TG++D +T++ M+ PRCGV
Sbjct: 130 ENYLLRFGYIQEAEVRRS--SKHVSLAKALRRMQKQLGLEETGELDASTLEAMRAPRCGV 303
Query: 104 PDQTRGSSKFNIRRKRYALTGQ-KWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNV 162
PD G F G+ KW H +TY + N +P + A RRAF VW +V
Sbjct: 304 PD-VGGFLTFE---------GELKWDHMDLTYRVMNYSPDLDRAVIDDAFRRAFKVWSDV 453
Query: 163 TPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPLTF ++ E DI I+F S HGD PFDG+ G LAHA+ PG GI GD HF
Sbjct: 454 TPLTFTQIYSGE-------ADIMIMFGSQEHGDGYPFDGKDGLLAHAFPPGSGIQGDAHF 612
Query: 223 DSDEPWTLG 231
D DE WTLG
Sbjct: 613 DDDEFWTLG 639
Score = 110 bits (274), Expect = 5e-22
Identities = 82/312 (26%), Positives = 136/312 (43%), Gaps = 8/312 (2%)
Frame = +1
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
+++D+D+ W G G +FLVA HE GH+LGL+HS+ A+M P Y Y++ +F+L
Sbjct: 1126 SNYDTDKKW--GFCPDRGYSIFLVAAHEFGHSLGLDHSSVREALMYPMYSYVQ--DFQLH 1293
Query: 280 NDDLQGIQKIYGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXG-- 337
DD+QGIQ +YG +S+
Sbjct: 1294 EDDVQGIQYLYGRGSGPEPTPPAPLPTEEPQSIPTEAGSASTTEEEEEETPEPTAEPSPV 1473
Query: 338 --AKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGY--PMQITYFWRGLPPSID 393
++ + NF+ + + E+ FK+ +W ++ G I W GLP ID
Sbjct: 1474 DPSRDACMEKNFDAITEINGELHFFKNGKYW-THSSFWKSGTQGAFSIADTWPGLPAVID 1650
Query: 394 AVYEN-SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTY 452
A +++ FF G ++WVF P + LG G I A+ GK
Sbjct: 1651 AAFQDVLTKRVFFFAGRQFWVFSGKNAVG--PRRIEKLGIGKEAGRITGAL-QRGRGKVL 1821
Query: 453 FFKGDRYWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
F G+ YWR +++T+D GYP+ ++ G+P + F++++ +F + YW+
Sbjct: 1822 LFSGEHYWRLDVKVQTVDKGYPRDTDDVFTGVPLDARNVFLYQDK--YHFCRDSFYWRMT 1995
Query: 512 NQILKVEPGYPR 523
+ GY R
Sbjct: 1996 PRYQVDRVGYIR 2031
Score = 42.4 bits (98), Expect = 0.13
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 9/151 (5%)
Frame = +1
Query: 390 PSIDAVYENS-------DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIP--PHGID 440
PS DA E + +G FFK KYW ++ ++ + P P ID
Sbjct: 1477 PSRDACMEKNFDAITEINGELHFFKNGKYWTH--SSFWKSGTQGAFSIADTWPGLPAVID 1650
Query: 441 SAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITIWKGIPESPQGAFVHKENGFTY 500
+A + +FF G ++W +S + + P + + I K GA + + G
Sbjct: 1651 AAFQDVLTKRVFFFAGRQFWVFSGK-NAVGPRRIEKLGIGKEAGRIT-GA-LQRGRGKVL 1821
Query: 501 FYKGKEYWKFNNQILKVEPGYPRSILKDFMG 531
+ G+ YW+ + ++ V+ GYPR F G
Sbjct: 1822 LFSGEHYWRLDVKVQTVDKGYPRDTDDVFTG 1914
>dbj|AB033755.1|AB033755 Oryzias latipes gel-b mRNA for gelatinase B, complete cds
Length = 2803
Score = 137 bits (345), Expect = 3e-30
Identities = 80/188 (42%), Positives = 104/188 (54%)
Frame = +1
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L+K+GY+ + S +S + AL MQ+ G++ TG++D T++ MK+PRCGV
Sbjct: 280 ESYLRKFGYMDTF--QRSGFQSLASTSKALKRMQRQLGLDETGQLDMQTLEAMKQPRCGV 453
Query: 104 PDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVT 163
PD + + KW H +TY I N +P + T A RAF VW +VT
Sbjct: 454 PD---------VANYKTFDGDLKWDHGDVTYRILNYSPDLDSSVTDDAFARAFKVWSDVT 606
Query: 164 PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 223
PLTF + L +G DI I F HGD PFDG+ G LAHAY PG GI GD HFD
Sbjct: 607 PLTF-----TRLFDGT--ADIMISFGKKDHGDLYPFDGKDGLLAHAYPPGEGIQGDAHFD 765
Query: 224 SDEPWTLG 231
DE WTLG
Sbjct: 766 DDEFWTLG 789
Score = 126 bits (316), Expect = 7e-27
Identities = 92/327 (28%), Positives = 140/327 (42%), Gaps = 5/327 (1%)
Frame = +1
Query: 217 GGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNF 276
G +D D+ W G G LFLVA HE GHALGL+HSN A+M P Y Y+E +F
Sbjct: 1267 GTTASYDDDKKW--GFCPDQGYSLFLVAAHEFGHALGLDHSNIRDALMYPMYSYVE--DF 1434
Query: 277 KLPNDDLQGIQKIYGXXXXXXXXXXXXX--XXXXHRSVXXXXXXXXXXXXXXXXXXXXXX 334
L DD++GIQ +YG
Sbjct: 1435 SLHEDDIEGIQYLYGSKTDPKPTVPQPKPPTTTATPDPDVTDSTDEPEPTNRPATTTLNP 1614
Query: 335 XXGAKPNICDGNFNTLAILRREMFVFKDQWFWRV-RNNRVMDGYPMQITYFWRGLPPSID 393
K F+T+ ++ +++ FKD FWR R PM I+ W LP ID
Sbjct: 1615 LDPTKDACKVTKFDTITVIGGDLYFFKDGHFWRKSRKGDAALESPMLISERWPALPAVID 1794
Query: 394 AVYENS-DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTY 452
+ +E+ FF G K+WV+ + P + LG ++ A+ + K
Sbjct: 1795 SAFEDILTKKLYFFSGTKFWVYTGKNVLG--PRSIEKLGLPDSVQKVEGALQ-KGKDKVL 1965
Query: 453 FFKGDRYWRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFN 511
F G+ +WR + + +D GYPK I ++ G+P F+++ G T+F + + YW+ N
Sbjct: 1966 LFSGENFWRLDVKTQKIDKGYPKYIDVVFGGVPIDAHDVFLYE--GRTFFCRDQFYWRMN 2139
Query: 512 NQILKVEPGYPRSILKDFMGCDGPTDR 538
++ GY + D + C P+ R
Sbjct: 2140 SRRQVDRVGY---VKYDLLKCTNPSSR 2211
>gb|S75623.1|S75623 collagenase [Rana catesbeiana=bullfrags, stage X tadpoles, back
skin, mRNA, 1521 nt]
Length = 1521
Score = 136 bits (343), Expect = 5e-30
Identities = 86/212 (40%), Positives = 109/212 (50%), Gaps = 2/212 (0%)
Frame = +3
Query: 76 MQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALT--GQKWQHKHIT 133
++QF+G+ +TGK D T+ MK+ CGVPD Y LT +W++ H+T
Sbjct: 213 LKQFFGLKVTGKPDAETLV-MKQSTCGVPDVGE-----------YVLTPGNPRWENTHLT 356
Query: 134 YSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFH 193
Y I+N TP + V+PLTF +V + DI I F G H
Sbjct: 357 YRIENYTPDL------------------VSPLTFTKVSEGQ-------ADIMISFVRGDH 461
Query: 194 GDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALG 253
D PFDG GG LAHA PGPGIGGD HFD E WT N +L+ VA HELGH+LG
Sbjct: 462 RDKYPFDGPGGNLAHASQPGPGIGGDAHFDEYERWT---KNFQDYNLYRVAAHELGHSLG 632
Query: 254 LEHSNDPTAIMAPFYQYMETDNFKLPNDDLQG 285
L HS D A+M P Y + +L DD+ G
Sbjct: 633 LSHSTDIGALMYPTYL---RGDVQLSQDDIDG 719
Score = 46.6 bits (109), Expect = 0.007
Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 3/137 (2%)
Frame = +3
Query: 340 PNICDGN--FNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYE 397
P +CD F+ + +R E+ FK +R NR F+ + + A YE
Sbjct: 759 PQVCDSKLTFDAITTVRGELMFFK------MRTNR-----------FYPEVELGLQAAYE 887
Query: 398 NSDGNFV-FFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKG 456
+D + V FFKGNKYW + GYP D+ + G + + E
Sbjct: 888 MADRDEVRFFKGNKYWAVSGQDVLYGYPKDIHS------SFGFPTGVAHE---------- 1019
Query: 457 DRYWRYSEEMKTMDPGY 473
W Y E ++MD GY
Sbjct: 1020--CWSYDEYKQSMDTGY 1064
>ref|NM_022791.1| Homo sapiens matrix metalloproteinase 19 (MMP19), transcript
variant rasi-6, mRNA
Length = 2304
Score = 135 bits (340), Expect = 1e-29
Identities = 86/213 (40%), Positives = 119/213 (55%), Gaps = 5/213 (2%)
Frame = +1
Query: 84 MTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKV 143
++G++D T M++PRCG+ D FN + +Y L G +W+ KH+T+ I N+ +
Sbjct: 247 VSGQLDDATRARMRQPRCGLEDP------FNQKTLKYLLLG-RWRKKHLTFRILNLPSTL 405
Query: 144 GDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGD-----SSP 198
R A+R+AF W NV PLTF+EV + G D+ ++ FHG S+
Sbjct: 406 PPHTARAALRQAFQDWSNVAPLTFQEV-----QAGAADIRLS------FHGRQSSYCSNT 552
Query: 199 FDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSN 258
FDG G LAHA P G HFD DE WT G + G +L ++A HE+GHALGL HS
Sbjct: 553 FDGPGRVLAHADIPEL---GSVHFDEDEFWTEG--TYRGVNLRIIAAHEVGHALGLGHSR 717
Query: 259 DPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
A+MAP Y+ +FKL DD+ GIQ +YG
Sbjct: 718 YSQALMAPVYEGYR-PHFKLHPDDVAGIQALYG 813
Score = 118 bits (296), Expect = 1e-24
Identities = 66/181 (36%), Positives = 103/181 (56%), Gaps = 2/181 (1%)
Frame = +2
Query: 354 RREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDA-VYENSDGNFVFFKGNKYW 412
R + + FK + W V ++ G +++ W GLP ++DA VY FFKG+K W
Sbjct: 1052 RGKTYAFKGDYVWTVSDSG--PGPLFRVSALWEGLPGNLDAAVYSPRTQWIHFFKGDKVW 1225
Query: 413 VFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPG 472
+ + + PG+P L N + P+ +D+A++W K + FKG YW++ E +T
Sbjct: 1226 RYINFKMSPGFPKKL----NRVEPN-LDAALYWPLNQKVFLFKGSGYWQWDELARTDFSS 1390
Query: 473 YPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMG 531
YPKPI ++ G+P P A + ++G YF+KGK YW+ N Q L+VE GYPR+I ++M
Sbjct: 1391 YPKPIKGLFTGVPNQPSAA-MSWQDGRVYFFKGKVYWRLNQQ-LRVEKGYPRNISHNWMH 1564
Query: 532 C 532
C
Sbjct: 1565 C 1567
>gb|U38431.1|HSU38431 Human clone rasi-6 matrix metalloproteinase RASI-1 mRNA, splice
variant, complete cds
Length = 2304
Score = 135 bits (340), Expect = 1e-29
Identities = 86/213 (40%), Positives = 119/213 (55%), Gaps = 5/213 (2%)
Frame = +1
Query: 84 MTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKV 143
++G++D T M++PRCG+ D FN + +Y L G +W+ KH+T+ I N+ +
Sbjct: 247 VSGQLDDATRARMRQPRCGLEDP------FNQKTLKYLLLG-RWRKKHLTFRILNLPSTL 405
Query: 144 GDPETRRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGD-----SSP 198
R A+R+AF W NV PLTF+EV + G D+ ++ FHG S+
Sbjct: 406 PPHTARAALRQAFQDWSNVAPLTFQEV-----QAGAADIRLS------FHGRQSSYCSNT 552
Query: 199 FDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSN 258
FDG G LAHA P G HFD DE WT G + G +L ++A HE+GHALGL HS
Sbjct: 553 FDGPGRVLAHADIPEL---GSVHFDEDEFWTEG--TYRGVNLRIIAAHEVGHALGLGHSR 717
Query: 259 DPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
A+MAP Y+ +FKL DD+ GIQ +YG
Sbjct: 718 YSQALMAPVYEGYR-PHFKLHPDDVAGIQALYG 813
Score = 118 bits (296), Expect = 1e-24
Identities = 66/181 (36%), Positives = 103/181 (56%), Gaps = 2/181 (1%)
Frame = +2
Query: 354 RREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDA-VYENSDGNFVFFKGNKYW 412
R + + FK + W V ++ G +++ W GLP ++DA VY FFKG+K W
Sbjct: 1052 RGKTYAFKGDYVWTVSDSG--PGPLFRVSALWEGLPGNLDAAVYSPRTQWIHFFKGDKVW 1225
Query: 413 VFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPG 472
+ + + PG+P L N + P+ +D+A++W K + FKG YW++ E +T
Sbjct: 1226 RYINFKMSPGFPKKL----NRVEPN-LDAALYWPLNQKVFLFKGSGYWQWDELARTDFSS 1390
Query: 473 YPKPIT-IWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMG 531
YPKPI ++ G+P P A + ++G YF+KGK YW+ N Q L+VE GYPR+I ++M
Sbjct: 1391 YPKPIKGLFTGVPNQPSAA-MSWQDGRVYFFKGKVYWRLNQQ-LRVEKGYPRNISHNWMH 1564
Query: 532 C 532
C
Sbjct: 1565 C 1567
>ref|XM_061185.1| Homo sapiens similar to matrix metalloproteinase-21 (LOC118856),
mRNA
Length = 1662
Score = 133 bits (335), Expect = 4e-29
Identities = 139/497 (27%), Positives = 199/497 (39%), Gaps = 38/497 (7%)
Frame = +1
Query: 54 PPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSK- 112
PP P+ + L A + Q+ + +G++D T+ M +PRCG G +
Sbjct: 298 PPETPKGAALAEA------VRRFQRANALPASGELDAATLAAMNRPRCGPRGYPDGGAAQ 459
Query: 113 -FNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNVTPLTFEEVP 171
F+ R + L G+ ++ ++ + RR + AF +W VTPL F E
Sbjct: 460 AFSKRTLSWRLLGEA------------LSSQLSVADQRRIVALAFRMWSEVTPLDFRE-- 597
Query: 172 YSELENGKRDVDITIIFASGFH-GDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTL 230
+L VDI + F G H G FDG G AHA+ G D HFD DE +T
Sbjct: 598 --DLAAPGAAVDIKLGFGRGRHLGCPRAFDGSGQEFAHAWRLG-----DIHFDDDEHFT- 753
Query: 231 GNPNHD-GNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKI 289
P D G L VAVHE+GH LGL H+ +IM P Y E F+L D + IQK+
Sbjct: 754 -PPTSDTGISLLKVAVHEIGHVLGLPHTYRTGSIMQPNYIPQE-PAFELDWSDRKAIQKL 927
Query: 290 YGXXXXXXXXXXXXXXXXXHRSVXXXXXXXXXXXXXXXXXXXXXXXXGAKPNICDGNFNT 349
YG C+G+F+T
Sbjct: 928 YGS--------------------------------------------------CEGSFDT 957
Query: 350 L-------------AILRREMFVFKDQWFW--RVRNNRVMDGYPMQITYFWRGLPP-SID 393
++R + F++ W+W RNNR G P+QI W G+P +ID
Sbjct: 958 AFDWIRKERNQYGEVMVRFSTYFFRNSWYWLYENRNNRTRYGDPIQILTGWPGIPTHNID 1137
Query: 394 A---VYENSDGNFVFFKGNKYWVF---KDTTLQ-----PGYPHDLITLGNGIPPHGIDSA 442
A ++ FF+GN+YW + KD L YP LI+ G P +D+A
Sbjct: 1138AFVHIWTWKRDERYFFQGNQYWRYDSDKDQALTEDEQGKSYP-KLISEGFPGIPSPLDTA 1314
Query: 443 IWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT--IWKGIPESP-----QGAFVHKE 495
+ YFFK + + + YPK IT IP++ A+
Sbjct: 1315FYDRRQKLIYFFKESLVFAFDVNRNRVLNSYPKRITEVFPAVIPQNHPFRNIDSAYYSYA 1494
Query: 496 NGFTYFYKGKEYWKFNN 512
+F+KG YWK N
Sbjct: 1495YNSIFFFKGNAYWKVVN 1545
Score = 63.5 bits (153), Expect = 6e-08
Identities = 43/136 (31%), Positives = 68/136 (49%), Gaps = 11/136 (8%)
Frame = +1
Query: 405 FFKGNKYWVFKDTTLQPGY--PHDLITLGNGIPPHGIDSA--IWWEDVGKTYFFKGDRYW 460
FF+ + YW++++ + Y P ++T GIP H ID+ IW + YFF+G++YW
Sbjct: 1024 FFRNSWYWLYENRNNRTRYGDPIQILTGWPGIPTHNIDAFVHIWTWKRDERYFFQGNQYW 1203
Query: 461 RYS---EEMKTMDP---GYPKPITI-WKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQ 513
RY ++ T D YPK I+ + GIP AF + YF+K + F+
Sbjct: 1204 RYDSDKDQALTEDEQGKSYPKLISEGFPGIPSPLDTAFYDRRQKLIYFFKESLVFAFDVN 1383
Query: 514 ILKVEPGYPRSILKDF 529
+V YP+ I + F
Sbjct: 1384 RNRVLNSYPKRITEVF 1431
>ref|NM_065193.1| protease
Length = 1560
Score = 132 bits (332), Expect = 1e-28
Identities = 90/274 (32%), Positives = 130/274 (46%), Gaps = 29/274 (10%)
Frame = +1
Query: 47 LQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106
++KYGYL D S + + AL Q+ + TG VD T++ KPRC D
Sbjct: 184 MEKYGYLKGIDHS-----SPQEFRQALMFFQEVLEVEQTGNVDEMTVEAASKPRCTQTDV 348
Query: 107 TRGSSKFNIRRKRYALTGQ-KWQHKH-----ITYSIKNVTPKVGDPETRRAIRRAFDVWQ 160
+ +K R KR+ L+ + KW H + + I + T + ETR+ + +AF +W
Sbjct: 349 RQEQTK---RTKRFTLSKRAKWAHASGQSVTLKWYISDYTSDIDRLETRKVVEKAFKLWS 519
Query: 161 NVT--------PLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGG-------- 204
+ + LTF+E + K + DI I++A G HGD FDG G
Sbjct: 520 SQSYIKNEKKVTLTFQEA------SSKDEADINILWAEGNHGDEHDFDGANGKIEGNKKE 681
Query: 205 -FLAHAYFPGPG--IGGDTHFDSDEPWTLG--NPNHDGNDLFL--VAVHELGHALGLEHS 257
LAH +FPG + GD HFD E W + H N F V HE+GHALGL+HS
Sbjct: 682 NVLAHTFFPGYARPLNGDIHFDDAEDWEIDVDQVGHGSNKRFFPYVLAHEIGHALGLDHS 861
Query: 258 NDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYG 291
A+M P+Y+ + + +L DD G+ YG
Sbjct: 862 QKADALMHPYYKNVPINEIQLDIDDKCGVIWNYG 963
>dbj|AB043994.1|AB043994 Bos taurus bmmp-2 mRNA for MMP-2, partial cds
Length = 489
Score = 129 bits (323), Expect = 1e-27
Identities = 71/160 (44%), Positives = 95/160 (59%), Gaps = 5/160 (3%)
Frame = +1
Query: 378 PMQITYFWRGLPPSIDAVYEN-SDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPP 436
P+ + FW LP IDAVYE+ + VFF GN+YWV+ +TL+ GYP L +L G+PP
Sbjct: 22 PLLVATFWPELPEKIDAVYEDPQEEKAVFFAGNEYWVYSASTLERGYPKPLTSL--GLPP 195
Query: 437 --HGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPIT-IWKGIPESPQGAFVH 493
+D+A W KTY F GD++WRY+E K MDPG+PK I W IP++
Sbjct: 196 GVQKVDAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDL 375
Query: 494 KENGFTYFYKGKEYWKFNNQILK-VEPGYPRSILKDFMGC 532
+ G +YF+KG Y K NQ LK V+ G SI D++GC
Sbjct: 376 QGGGHSYFFKGAYYLKLENQSLKSVKFG---SIKSDWLGC 486
Score = 37.7 bits (86), Expect = 3.3
Identities = 21/69 (30%), Positives = 36/69 (51%), Gaps = 3/69 (4%)
Frame = +1
Query: 355 REMFVFKDQWFWRVRN-NRVMD-GYPMQITYFWRGLPPSIDAVYE-NSDGNFVFFKGNKY 411
++ ++F FWR + MD G+P I W +P ++DAV + G+ FFKG Y
Sbjct: 238 KKTYIFAGDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYY 417
Query: 412 WVFKDTTLQ 420
++ +L+
Sbjct: 418 LKLENQSLK 444
>gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II section 241 of 255 of the complete
sequence. Sequence from clones T13E15, T14P1
Length = 87885
Score = 128 bits (322), Expect = 1e-27
Identities = 89/255 (34%), Positives = 125/255 (48%), Gaps = 10/255 (3%)
Frame = +1
Query: 47 LQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106
LQ+YGYLP V + + AL Q+ G+ +TGK D +T+ + PRCG PD
Sbjct: 43489 LQQYGYLPQNKESDDV-----SFEQALVRYQKNLGLPITGKPDSDTLSQILLPRCGFPDD 43653
Query: 107 TRG-SSKFNIRRKRYALTGQ-KWQHK---HITYSI--KNVTPKVGDPETRRAIRRAFDVW 159
++ F+ +K G+ +W +TY+ +N+TP + + RR RRAF W
Sbjct: 43654 VEPKTAPFHTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKW 43833
Query: 160 QNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+V P++F E + DI I F +G HGD PFDG G LAH + P G
Sbjct: 43834 ASVIPVSFIETEDYVI------ADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPE---NGR 43986
Query: 220 THFDSDEPWTLGNPNHDGN---DLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNF 276
H D E W + + DL VAVHE+GH LGL HS+ A M P + +
Sbjct: 43987 LHLDKAETWAVDFDEEKSSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLK-PRSKKV 44163
Query: 277 KLPNDDLQGIQKIYG 291
L DD+ G+Q +YG
Sbjct: 44164 NLNMDDVVGVQSLYG 44208
>gb|BC006093.1|BC006093 Homo sapiens, matrix metalloproteinase 9 (gelatinase B, 92kD
gelatinase, 92kD type IV collagenase), clone MGC:12688
IMAGE:4054882, mRNA, complete cds
Length = 2373
Score = 128 bits (322), Expect = 1e-27
Identities = 81/200 (40%), Positives = 104/200 (51%), Gaps = 5/200 (2%)
Frame = +3
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L +YGY + R ++++ AL +Q+ + TG++D T+ M+ PRCGV
Sbjct: 141 EEYLYRYGYTRVAEMR----GESKSLGPALLLLQKQLSLPETGELDSATLKAMRTPRCGV 308
Query: 104 PDQTRGSSKFNIRRKRYALTGQ-KWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNV 162
PD R + G KW H +ITY I+N + + A RAF +W V
Sbjct: 309 PDLGRFQT----------FEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAV 458
Query: 163 TPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPLTF V YS RD DI I F HGD PFDG+ G LAHA+ PGPGI GD HF
Sbjct: 459 TPLTFTRV-YS------RDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGPGIQGDAHF 617
Query: 223 DSDEPWTLGN----PNHDGN 238
D DE W+LG P GN
Sbjct: 618 DDDELWSLGKGVVVPTRFGN 677
Score = 67.8 bits (164), Expect = 3e-09
Identities = 35/72 (48%), Positives = 47/72 (64%)
Frame = +3
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
++FDSD+ W G G LFLVA HE GHALGL+HS+ P A+M P Y++ T+ L
Sbjct: 1134 SNFDSDKKW--GFCPDQGYSLFLVAAHEFGHALGLDHSSVPEALMYPMYRF--TEGPPLH 1301
Query: 280 NDDLQGIQKIYG 291
DD+ GI+ +YG
Sbjct: 1302 KDDVNGIRHLYG 1337
Score = 65.5 bits (158), Expect = 1e-08
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Frame = +3
Query: 343 CDGN-FNTLAILRREMFVFKDQWFWRVRNNRVMDGY-PMQITYFWRGLPPSIDAVYENS- 399
C+ N F+ +A + ++++FKD +WR R P I W LP +D+V+E
Sbjct: 1551 CNVNIFDAIAEIGNQLYLFKDGKYWRFSEGRGSRPQGPFLIADKWPALPRKLDSVFEEPL 1730
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
FF G + WV+ ++ P L LG G + A+ GK F G R
Sbjct: 1731 SKKLFFFSGRQVWVYTGASVLG--PRRLDKLGLGADVAQVTGALR-SGRGKMLLFSGRRL 1901
Query: 460 WRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQ 513
WR+ + + +DP + ++ G+P F ++E YF + + YW+ +++
Sbjct: 1902 WRFDVKAQMVDPRSASEVDRMFPGVPLDTHDVFQYREK--AYFCQDRFYWRVSSR 2060
>ref|NM_130068.1| Arabidopsis thaliana chromosome 2 CHR2v12152001 genomic sequence
Length = 1215
Score = 128 bits (322), Expect = 1e-27
Identities = 89/255 (34%), Positives = 125/255 (48%), Gaps = 10/255 (3%)
Frame = +1
Query: 47 LQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106
LQ+YGYLP V + + AL Q+ G+ +TGK D +T+ + PRCG PD
Sbjct: 193 LQQYGYLPQNKESDDV-----SFEQALVRYQKNLGLPITGKPDSDTLSQILLPRCGFPDD 357
Query: 107 TRG-SSKFNIRRKRYALTGQ-KWQHK---HITYSI--KNVTPKVGDPETRRAIRRAFDVW 159
++ F+ +K G+ +W +TY+ +N+TP + + RR RRAF W
Sbjct: 358 VEPKTAPFHTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKW 537
Query: 160 QNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGD 219
+V P++F E + DI I F +G HGD PFDG G LAH + P G
Sbjct: 538 ASVIPVSFIETEDYVI------ADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPE---NGR 690
Query: 220 THFDSDEPWTLGNPNHDGN---DLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNF 276
H D E W + + DL VAVHE+GH LGL HS+ A M P + +
Sbjct: 691 LHLDKAETWAVDFDEEKSSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLK-PRSKKV 867
Query: 277 KLPNDDLQGIQKIYG 291
L DD+ G+Q +YG
Sbjct: 868 NLNMDDVVGVQSLYG 912
>ref|NM_004994.1| Homo sapiens matrix metalloproteinase 9 (gelatinase B, 92kD
gelatinase, 92kD type IV collagenase) (MMP9), mRNA
Length = 2334
Score = 128 bits (322), Expect = 1e-27
Identities = 81/200 (40%), Positives = 104/200 (51%), Gaps = 5/200 (2%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L +YGY + R ++++ AL +Q+ + TG++D T+ M+ PRCGV
Sbjct: 155 EEYLYRYGYTRVAEMR----GESKSLGPALLLLQKQLSLPETGELDSATLKAMRTPRCGV 322
Query: 104 PDQTRGSSKFNIRRKRYALTGQ-KWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNV 162
PD R + G KW H +ITY I+N + + A RAF +W V
Sbjct: 323 PDLGRFQT----------FEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAV 472
Query: 163 TPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPLTF V YS RD DI I F HGD PFDG+ G LAHA+ PGPGI GD HF
Sbjct: 473 TPLTFTRV-YS------RDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGPGIQGDAHF 631
Query: 223 DSDEPWTLGN----PNHDGN 238
D DE W+LG P GN
Sbjct: 632 DDDELWSLGKGVVVPTRFGN 691
Score = 67.8 bits (164), Expect = 3e-09
Identities = 35/72 (48%), Positives = 47/72 (64%)
Frame = +2
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
++FDSD+ W G G LFLVA HE GHALGL+HS+ P A+M P Y++ T+ L
Sbjct: 1148 SNFDSDKKW--GFCPDQGYSLFLVAAHEFGHALGLDHSSVPEALMYPMYRF--TEGPPLH 1315
Query: 280 NDDLQGIQKIYG 291
DD+ GI+ +YG
Sbjct: 1316 KDDVNGIRHLYG 1351
Score = 65.5 bits (158), Expect = 1e-08
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Frame = +2
Query: 343 CDGN-FNTLAILRREMFVFKDQWFWRVRNNRVMDGY-PMQITYFWRGLPPSIDAVYENS- 399
C+ N F+ +A + ++++FKD +WR R P I W LP +D+V+E
Sbjct: 1565 CNVNIFDAIAEIGNQLYLFKDGKYWRFSEGRGSRPQGPFLIADKWPALPRKLDSVFEEPL 1744
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
FF G + WV+ ++ P L LG G + A+ GK F G R
Sbjct: 1745 SKKLFFFSGRQVWVYTGASVLG--PRRLDKLGLGADVAQVTGALR-SGRGKMLLFSGRRL 1915
Query: 460 WRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQ 513
WR+ + + +DP + ++ G+P F ++E YF + + YW+ +++
Sbjct: 1916 WRFDVKAQMVDPRSASEVDRMFPGVPLDTHDVFQYREK--AYFCQDRFYWRVSSR 2074
>gb|J05070.1|HUM4COLA Human type IV collagenase mRNA, complete cds
Length = 2334
Score = 128 bits (322), Expect = 1e-27
Identities = 81/200 (40%), Positives = 104/200 (51%), Gaps = 5/200 (2%)
Frame = +2
Query: 44 EVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGV 103
E +L +YGY + R ++++ AL +Q+ + TG++D T+ M+ PRCGV
Sbjct: 155 EEYLYRYGYTRVAEMR----GESKSLGPALLLLQKQLSLPETGELDSATLKAMRTPRCGV 322
Query: 104 PDQTRGSSKFNIRRKRYALTGQ-KWQHKHITYSIKNVTPKVGDPETRRAIRRAFDVWQNV 162
PD R + G KW H +ITY I+N + + A RAF +W V
Sbjct: 323 PDLGRFQT----------FEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAV 472
Query: 163 TPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHF 222
TPLTF V YS RD DI I F HGD PFDG+ G LAHA+ PGPGI GD HF
Sbjct: 473 TPLTFTRV-YS------RDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGPGIQGDAHF 631
Query: 223 DSDEPWTLGN----PNHDGN 238
D DE W+LG P GN
Sbjct: 632 DDDELWSLGKGVVVPTRFGN 691
Score = 67.8 bits (164), Expect = 3e-09
Identities = 35/72 (48%), Positives = 47/72 (64%)
Frame = +2
Query: 220 THFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLP 279
++FDSD+ W G G LFLVA HE GHALGL+HS+ P A+M P Y++ T+ L
Sbjct: 1148 SNFDSDKKW--GFCPDQGYSLFLVAAHEFGHALGLDHSSVPEALMYPMYRF--TEGPPLH 1315
Query: 280 NDDLQGIQKIYG 291
DD+ GI+ +YG
Sbjct: 1316 KDDVNGIRHLYG 1351
Score = 65.5 bits (158), Expect = 1e-08
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Frame = +2
Query: 343 CDGN-FNTLAILRREMFVFKDQWFWRVRNNRVMDGY-PMQITYFWRGLPPSIDAVYENS- 399
C+ N F+ +A + ++++FKD +WR R P I W LP +D+V+E
Sbjct: 1565 CNVNIFDAIAEIGNQLYLFKDGKYWRFSEGRGSRPQGPFLIADKWPALPRKLDSVFEEPL 1744
Query: 400 DGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGNGIPPHGIDSAIWWEDVGKTYFFKGDRY 459
FF G + WV+ ++ P L LG G + A+ GK F G R
Sbjct: 1745 SKKLFFFSGRQVWVYTGASVLG--PRRLDKLGLGADVAQVTGALR-SGRGKMLLFSGRRL 1915
Query: 460 WRYSEEMKTMDPGYPKPI-TIWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQ 513
WR+ + + +DP + ++ G+P F ++E YF + + YW+ +++
Sbjct: 1916 WRFDVKAQMVDPRSASEVDRMFPGVPLDTHDVFQYREK--AYFCQDRFYWRVSSR 2074
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 22, 2002 12:59 AM
Number of letters in database: 602,804,554
Number of sequences in database: 1,166,659
Lambda K H
0.322 0.141 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,940,679,938
Number of Sequences: 1166659
Number of extensions: 67829764
Number of successful extensions: 264939
Number of sequences better than 10.0: 989
Number of HSP's better than 10.0 without gapping: 50227
Number of HSP's successfully gapped in prelim test: 9977
Number of HSP's that attempted gapping in prelim test: 168252
Number of HSP's gapped (non-prelim): 149865
length of query: 607
length of database: 1,632,590,616
effective HSP length: 141
effective length of query: 466
effective length of database: 1,468,091,697
effective search space: 684130730802
effective search space used: 684130730802
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 82 (36.2 bits)