TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(494 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,168,056 sequences; 626,783,262 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_007650.1| Mus musculus CD5 antigen (Cd5), mRNA 895 0.0
gb|M15177.1|MUSLY1A Mouse lymphocyte differentiation antige... 895 0.0
gb|BC011258.1|BC011258 Mus musculus, Similar to CD5 antigen... 894 0.0
gb|U65961.1|MMU65961 Mus musculus CD5.1 mRNA, complete cds 890 0.0
ref|NM_019295.1| Rattus norvegicus Lymphocyte antigen CD5 (... 744 0.0
dbj|D10728.1|RATLACD5 Rat mRNA for lymphocyte antigen CD5, ... 744 0.0
emb|X78985.1|RNCD5RN R.norvegicus CD5 mRNA 700 0.0
ref|NM_014207.1| Homo sapiens CD5 antigen (p56-62) (CD5), mRNA 525 e-147
emb|X04391.1|HSTIR Human mRNA for lymphocyte glycoprotein T... 525 e-147
emb|X53061.1|BTCD5A Bovine mRNA for CD5 antigen 437 e-120
gb|M97195.1|SHPDCC5 Ovis aries Merino CD5 mRNA, partial cds 421 e-116
emb|Y12011.1|GGCD5 Gallus gallus CD5 mRNA 235 8e-60
gb|AF291867.1|AF291867 Sus scrofa CD5 antigen gene, partial... 139 5e-31
emb|AJ237929.1|HSA237929 Homo sapiens CD5 gene, exon 6 132 1e-28
emb|AJ237928.1|HSA237928 Homo sapiens CD5 gene, exons 3, 4 ... 124 3e-26
emb|AJ306429.1|GGA306429 Gallus gallus CD5 gene 72 2e-14
emb|X99333.1|SSSRP2 S.scrofa mRNA for scavenger-receptor pr... 83 5e-14
ref|NM_033330.1| Homo sapiens scavenger receptor cysteine-r... 82 9e-14
gb|AF264014.1|AF264014 Homo sapiens scavenger receptor cyst... 82 9e-14
emb|X99336.1|SSSRP5 S.scrofa mRNA for scavenger-receptor pr... 82 1e-13
gb|AF043112.1|AF043112 Oryctolagus cuniculus hensin mRNA, c... 80 3e-13
ref|NM_053094.1| Mus musculus CD163 antigen (Cd163), mRNA 80 6e-13
gb|AF274883.1|AF274883 Mus musculus macrophage hemoglobin s... 80 6e-13
ref|XM_061082.2| Homo sapiens similar to DMBT1/8kb.2 protei... 80 6e-13
emb|AJ237932.1|HSA237932 Homo sapiens CD5 gene, exons 9, 10... 78 2e-12
ref|NM_017579.1| Homo sapiens deleted in malignant brain tu... 77 3e-12
emb|AJ243224.1|HSA243224 Homo sapiens mRNA for DMBT1 protei... 77 3e-12
dbj|AB051832.1|AB051832 Gallus gallus mRNA for PIT 54, comp... 77 4e-12
emb|AJ243212.1|HSA243212 Homo sapiens mRNA for DMBT1 protei... 75 2e-11
ref|NM_007329.1| Homo sapiens deleted in malignant brain tu... 75 2e-11
gb|AF159456.1|AF159456 Homo sapiens gp-340 variant protein ... 75 2e-11
gb|S78981.1|S78981 mucin {clone pGBM7-1} [cattle, gall-blad... 74 2e-11
emb|X63723.1|BBWC11MR B.bovis WC1.1 mRNA 74 3e-11
emb|AJ297935.1|HSA297935 Homo sapiens mRNA for DMBT1 8 kb t... 74 3e-11
gb|BC014294.1|BC014294 Mus musculus, Similar to CD6 antigen... 73 7e-11
gb|L03204.1|RABCDBA Oryctolagus cuniculus DNA sequence 73 7e-11
gb|U35370.1|MMU35370 Mus musculus T cell accessory signal r... 73 7e-11
gb|U12434.1|MMU12434 Mus musculus mscd6 precursor (Cd6) mRN... 73 7e-11
ref|NM_009852.1| Mus musculus CD6 antigen (Cd6), mRNA 72 9e-11
gb|U37544.1|MMU37544 Mus musculus T cell surface glycoprote... 72 9e-11
gb|U37543.1|MMU37543 Mus musculus T cell surface glycoprote... 72 9e-11
emb|Z22970.1|HSM130AC2 H.sapiens mRNA for M130 antigen cyto... 72 1e-10
emb|Z22971.1|HSM130AE H.sapiens mRNA for M130 antigen extra... 72 1e-10
emb|Z22969.1|HSM130AC1 H.sapiens mRNA for M130 antigen cyto... 72 1e-10
ref|NM_004244.1| Homo sapiens CD163 antigen (CD163), mRNA 72 1e-10
emb|Z22968.1|HSM130A H.sapiens mRNA for M130 antigen 72 1e-10
ref|XM_053730.3| Homo sapiens similar to deleted in maligna... 72 2e-10
gb|AF400122.1|AF400122 Ovis aries EP4a mRNA, partial cds 72 2e-10
gb|U66146.1|HSU66146 Human CD6e mRNA, complete cds 70 4e-10
gb|U66145.1|HSU66145 Human CD6d mRNA, complete cds 70 4e-10
gb|U66144.1|HSU66144 Human CD6c mRNA, complete cds 70 4e-10
ref|NM_006725.1| Homo sapiens CD6 antigen (CD6), mRNA 70 4e-10
gb|U66142.1|HSU66142 Human CD6a mRNA, complete cds 70 4e-10
gb|U66143.1|HSU66143 Human CD6b mRNA, complete cds 70 4e-10
gb|U34625.1|HSU34625 Human T cell surface glycoprotein CD-6... 70 4e-10
emb|X60992.1|HSCD6 H.sapiens CD6 mRNA for T cell glycoprote... 70 4e-10
gb|U34623.1|HSU34623 Human T cell surface glycoprotein CD-6... 70 4e-10
gb|U34624.1|HSU34624 Human T cell surface glycoprotein CD-6... 70 4e-10
ref|NM_004406.1| Homo sapiens deleted in malignant brain tu... 70 6e-10
emb|AJ000342.1|HSDMBT1 Homo sapiens mRNA for DMBT1 6 kb tra... 70 6e-10
gb|AF400115.1|AF400115 Ovis aries EM4b mRNA, partial cds 70 6e-10
ref|XM_053729.3| Homo sapiens deleted in malignant brain tu... 69 1e-09
gb|AF018268.1|AF018268 Mus musculus Sp-alpha mRNA, complete... 68 2e-09
gb|AF018269.1|AF018269 Mus musculus Sp-alpha mRNA, complete... 68 2e-09
gb|BC006799.1|BC006799 Mus musculus, apoptosis inhibitory 6... 68 2e-09
ref|NM_009690.1| Mus musculus apoptosis inhibitory 6 (Api6)... 67 3e-09
gb|AF011428.1|AF011428 Mus musculus CT-2 mRNA, complete cds 67 3e-09
ref|XM_051448.2| Homo sapiens similar to deleted in maligna... 66 9e-09
ref|NM_005894.1| Homo sapiens CD5 antigen-like (scavenger r... 66 9e-09
gb|U82812.1|HSU82812 Human scavenger receptor cysteine rich... 66 9e-09
gb|AF011429.1|AF011429 Homo sapiens CT-2 mRNA, complete cds 66 9e-09
gb|AF064259.1|AF064259 Strongylocentrotus purpuratus scaven... 65 2e-08
dbj|AK058038.1|AK058038 Homo sapiens cDNA FLJ25309 fis, clo... 65 2e-08
emb|X99334.1|SSSRP3 S.scrofa mRNA for scavenger-receptor pr... 64 3e-08
ref|NM_007769.1| Mus musculus crp-ductin (Crpd), mRNA 61 2e-07
gb|U37438.1|MMU37438 Mus musculus CRP-ductin-alpha mRNA, co... 61 2e-07
dbj|AB005909.1|AB005909 Mus musculus mRNA for vomeroglandin... 61 2e-07
gb|AF228825.1|AF228825 Strongylocentrotus purpuratus clone ... 59 1e-06
gb|AF228824.1|AF228824 Strongylocentrotus purpuratus clone ... 59 1e-06
emb|X99335.1|SSSRP4 S.scrofa mRNA for scavenger-receptor pr... 59 1e-06
emb|X99332.1|SSSRP1 S.scrofa mRNA for scavenger-receptor pr... 54 3e-05
ref|NM_080744.1| Homo sapiens scavenger receptor cysteine r... 52 2e-04
emb|AJ312755.1|HSA312755 Homo sapiens mRNA for scavenger re... 52 2e-04
gb|AF228857.1|AF228857 Strongylocentrotus purpuratus clone ... 51 2e-04
gb|L78838.1|L78837S2 Homo sapiens T cell surface glycoprote... 51 3e-04
gb|AF400118.1|AF400118 Ovis aries EP4e mRNA, partial cds 51 3e-04
gb|AC003689.1|AC003689 Homo sapiens Chromosome 11q12.2 PAC ... 51 3e-04
emb|Y18391.1|HSA118391 Homo sapiens CD163 gene, exon 4 50 5e-04
ref|NM_022849.1| Rattus norvegicus crp-ductin (Crpd), mRNA 50 5e-04
gb|U32681.1|RNU32681 Rattus norvegicus ebnerin mRNA, comple... 50 5e-04
emb|AL139409.9|AL139409 Human DNA sequence from clone RP11-... 50 5e-04
gb|AF228827.1|AF228827 Strongylocentrotus purpuratus clone ... 50 6e-04
emb|Y18397.1|HSA118397 Homo sapiens CD163 gene, exon 10 49 0.001
gb|U20652.1|PMU20652 Petromyzon marinus scavenger receptor ... 49 0.001
gb|AF078900.1|AF078900 Oryctolagus cuniculus hensin (DMBT1)... 49 0.001
emb|Y18390.1|HSA118390 Homo sapiens CD163 gene, exon 3 48 0.002
emb|Y18393.1|HSA118393 Homo sapiens CD163 gene, exon 6 48 0.002
dbj|AB020818.1|AB02081S07 Homo sapiens gene for DMBT1, exon 7 48 0.002
emb|AJ243211.1|HSA243211 Homo sapiens DMBT1 candidate tumou... 48 0.002
emb|Y14243.1|GCY14243 Geodia cydonium mRNA for multiadhesiv... 47 0.003
gb|AF079225.1|AF079224S2 Mus musculus hensin (Dmbt1) gene, ... 47 0.003
emb|Y14953.1|GCY14953 Geodia cydonium mRNA for SRCR domain ... 47 0.003
emb|AL161645.14|AL161645 Human DNA sequence from clone RP11... 47 0.003
dbj|AB020844.1|AB02081S33 Homo sapiens gene for DMBT1, exon 33 47 0.004
gb|AF400120.1|AF400120 Ovis aries EP4c mRNA, partial cds 47 0.005
gb|AF079226.1|AF079224S3 Mus musculus hensin (Dmbt1) gene, ... 47 0.005
gb|AF079224.1|AF079224S1 Mus musculus hensin (Dmbt1) gene, ... 47 0.005
gb|AC091514.2| Rattus norvegicus clone RP31-223K12 strain B... 47 0.005
dbj|AB020827.1|AB02081S16 Homo sapiens gene for DMBT1, exon 16 46 0.007
gb|AF079227.1|AF079224S4 Mus musculus hensin (Dmbt1) gene, ... 46 0.007
ref|NM_003619.1| Homo sapiens protease, serine, 12 (neurotr... 46 0.007
emb|AJ001531.1|HSNEUROTR Homo sapiens mRNA for neurotrypsin 46 0.007
gb|BC007761.1|BC007761 Homo sapiens, protease, serine, 12 (... 46 0.007
gb|AF076513.1|AF076513 Strongylocentrotus purpuratus scaven... 46 0.009
emb|AL359747.14|AL359747 Human DNA sequence from clone RP11... 45 0.012
gb|AF228826.1|AF228826 Strongylocentrotus purpuratus clone ... 45 0.012
dbj|AB042274.1|AB042274 Bos taurus mRNA for CD6, partial cds 45 0.012
dbj|AB046070.1|AB046070 Macaca fascicularis brain cDNA, clo... 45 0.016
gb|BC016551.1|BC016551 Mus musculus, macrophage scavenger r... 45 0.021
gb|AF077753.1|AF077753 Oryctolagus cuniculus hensin (DMBT1)... 45 0.021
dbj|AB028174.1|AB028174 Mus musculus MMAN-g mRNA, complete cds 45 0.021
gb|AF079228.1|AF079224S5 Mus musculus hensin (Dmbt1) gene, ... 45 0.021
emb|Y18399.1|HSA118399 Homo sapiens CD163 gene, exon 12 45 0.021
emb|Y18392.1|HSA118392 Homo sapiens CD163 gene, exon 5 45 0.021
gb|AF329486.1|AF329486 Mus musculus IFGP2 mRNA, complete cds 45 0.021
emb|AJ237930.1|HSA237930 Homo sapiens CD5 gene, exon 7 45 0.021
ref|NM_030707.1| Mus musculus macrophage scavenger receptor... 45 0.021
gb|AF302046.1|AF302046 Mus musculus immunoglobulin scavenge... 45 0.021
dbj|AB020824.1|AB02081S13 Homo sapiens gene for DMBT1, exon 13 44 0.027
gb|AF400113.1|AF400113 Ovis aries EM4d mRNA, partial cds 44 0.027
gb|AF228861.1|AF228861 Strongylocentrotus purpuratus clone ... 44 0.027
gb|AF105035.1|AF105035 Macaca mulatta unknown mRNA, partial... 44 0.027
dbj|AB020839.1|AB02081S28 Homo sapiens gene for DMBT1, exon 28 44 0.036
emb|AJ306917.1|HSA306917 Homo sapiens partial SRCRB-S4D gen... 44 0.036
gb|AC005522.2|AC005522 Homo sapiens PAC clone RP5-1129E22 f... 44 0.036
gb|AC093132.2| Papio cynocephalus anubis clone RP41-51M7, c... 44 0.046
emb|AJ329455.1|HSA329455 Homo sapiens genomic sequence surr... 44 0.046
emb|AJ339223.1|HSA339223 Homo sapiens genomic sequence surr... 44 0.046
emb|Y18394.1|HSA118394 Homo sapiens CD163 gene, exon 7 44 0.046
emb|AJ306915.1|HSA306915 Homo sapiens partial SRCRB-S4D gen... 44 0.046
emb|AJ339229.1|HSA339229 Homo sapiens genomic sequence surr... 44 0.046
gb|S78869.1|S78869 mucin {clone pGBM31-1} [cattle, pancreas... 44 0.046
dbj|AB020830.1|AB02081S19 Homo sapiens gene for DMBT1, exon 19 43 0.061
ref|XM_059877.1| Homo sapiens scavenger receptor cysteine r... 43 0.061
gb|BC015651.1|BC015651 Homo sapiens, clone MGC:23460 IMAGE:... 43 0.061
emb|Y15214.1|OAY15214 Ovis aries mRNA for T19 protein, part... 43 0.061
dbj|AB020836.1|AB02081S25 Homo sapiens gene for DMBT1, exon 25 43 0.079
emb|AJ306922.1|HSA306922 Homo sapiens partial SRCRB-S4D gen... 43 0.079
emb|Y18395.1|HSA118395 Homo sapiens CD163 gene, exon 8 42 0.10
gb|S76311.1|S76311S1 Ovis aries 180-200 kda membrane protei... 42 0.14
dbj|AB020821.1|AB02081S10 Homo sapiens gene for DMBT1, exon 10 42 0.14
dbj|AB020833.1|AB02081S22 Homo sapiens gene for DMBT1, exon 22 42 0.14
ref|XM_100034.1| Homo sapiens LOC159436 (LOC159436), mRNA 41 0.30
gb|AF228834.1|AF228834 Strongylocentrotus purpuratus clone ... 40 0.39
gb|AF228823.1|AF228823 Strongylocentrotus purpuratus clone ... 40 0.51
gb|AF065438.1|AF065438 Rattus norvegicus mama mRNA, complet... 39 0.88
dbj|AK014331.1|AK014331 Mus musculus 14, 17 days embryo hea... 39 1.1
emb|X51689.1|BTSCAVR1 B.taurus mRNA for macrophage scavenge... 39 1.1
gb|AF143003.2|AF143003 Perca flavescens lysyl oxidase relat... 38 2.0
gb|AF103901.2|AF103901 Perca flavescens lysyl oxidase-like ... 38 2.0
emb|AJ306920.1|HSA306920 Homo sapiens partial SRCRB-S4D gen... 38 2.0
gb|AC096762.3| Homo sapiens chromosome 4 clone RP11-621I20,... 38 2.5
emb|AL160006.16|AL160006 Human DNA sequence from clone RP4-... 37 3.3
ref|NM_011150.1| Mus musculus peptidylprolyl isomerase C-as... 37 4.3
emb|X67809.1|MMMAMA M.musculus mama mRNA 37 4.3
gb|M59445.1|MUSCRPA Mouse macrophage scavenger receptor mRN... 37 4.3
gb|AF203781.1|AF203781 Mus musculus scavenger receptor type... 37 4.3
gb|L04274.1|MUSMSRI Mus musculus macrophage scavenger recep... 37 4.3
ref|NM_079082.1| Drosophila melanogaster lysyl oxidase-like... 37 5.7
emb|AJ295626.1|DME295626 Drosophila melanogaster mRNA for l... 37 5.7
gb|AC098805.1| Homo sapiens chromosome 16 clone RP11-657D15... 28 6.5
gb|AC005212.1|AC005212 Homo sapiens chromosome 16, P1 clone... 28 6.8
gb|BC020481.1|BC020481 Homo sapiens, clone IMAGE:3873591, mRNA 36 7.4
gb|BC000594.1|BC000594 Homo sapiens, lysyl oxidase-like 2, ... 36 7.4
gb|BC013153.1|BC013153 Homo sapiens, clone MGC:17373 IMAGE:... 36 7.4
gb|AF117949.1|AF117949 Homo sapiens lysyl oxidase-like prot... 36 7.4
gb|L11693.1|RABMSRIA Oryctolagus cuniculus macrophage scave... 36 7.4
gb|AY052072.1| Drosophila melanogaster SD02860 full length ... 36 7.4
emb|AJ309005.1|DME309005 Drosophila melanogaster mRNA for G... 36 7.4
ref|NM_002318.1| Homo sapiens lysyl oxidase-like 2 (LOXL2),... 36 7.4
ref|NM_053083.1| Mus musculus lysyl oxidase-like 4 (Loxl4),... 36 7.4
gb|AF338440.1|AF338440 Mus musculus lysyl oxidase-related p... 36 7.4
gb|U89942.1|HSU89942 Human lysyl oxidase-related protein (W... 36 7.4
emb|AJ251803.1|DME251803 Drosophila melanogaster mRNA for G... 36 7.4
ref|NM_032211.4| Homo sapiens lysyl oxidase-like 4 (LOXL4),... 36 7.4
ref|XM_084352.1| Homo sapiens lysyl oxidase-like 4 (LOXL4),... 36 7.4
gb|AF395336.1|AF395336 Homo sapiens lysyl oxidase-like 4 (L... 36 7.4
gb|AF338441.1|AF338441 Homo sapiens lysyl oxidase-related p... 36 7.4
gb|L16894.1|MUSCYCLOC Mus musculus Cyclophilin C (CyCAP) mR... 36 7.4
gb|AY036093.1| Homo sapiens lysyl oxidase-like 4 mRNA, comp... 36 7.4
dbj|D13381.1|RABMSRT1 Rabbit mRNA for macrophage scavenger ... 36 7.4
gb|BC015761.1|BC015761 Homo sapiens, lectin, galactoside-bi... 36 9.7
gb|BC002403.1|BC002403 Homo sapiens, lectin, galactoside-bi... 36 9.7
ref|NM_005567.2| Homo sapiens lectin, galactoside-binding, ... 36 9.7
ref|NM_008939.1| Mus musculus protease, serine, 12 neurotry... 36 9.7
gb|BC011298.1|BC011298 Mus musculus, Similar to lysyl oxida... 36 9.7
emb|AL133174.15| Human DNA sequence from clone RP3-470L14 o... 36 9.7
emb|Y13192.1|MMY13192 Mus musculus mRNA for neurotrypsin 36 9.7
dbj|D89871.1|D89871 Mus musculus mRNA for serine protease, ... 36 9.7
ref|XM_045104.3| Homo sapiens lectin, galactoside-binding, ... 36 9.7
gb|L13210.1|HUMMAC2A Human Mac-2 binding protein mRNA, comp... 36 9.7
emb|X79089.1|HS90KTAA H.sapiens mRNA for 90K product 36 9.7
gb|BC002998.1|BC002998 Homo sapiens, lectin, galactoside-bi... 36 9.7
ref|XM_041019.1| Homo sapiens AE binding protein 1 (AEBP1),... 36 9.7
>ref|NM_007650.1| Mus musculus CD5 antigen (Cd5), mRNA
Length = 1945
Score = 895 bits (2314), Expect = 0.0
Identities = 437/494 (88%), Positives = 437/494 (88%)
Frame = +1
Query: 1 MDSHEVXXXXXXXXXXXXXFCLGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCS 60
MDSHEV FCLGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCS
Sbjct: 7 MDSHEVLLAATYLLGTLAAFCLGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCS 186
Query: 61 SSWRLSQDHSKNAQQASAVCKQLRCGDPLALGPFPSLNRPQNQVFCQGSPWSISNCNNTS 120
SSWRLSQDHSKNAQQASAVCKQLRCGDPLALGPFPSLNRPQNQVFCQGSPWSISNCNNTS
Sbjct: 187 SSWRLSQDHSKNAQQASAVCKQLRCGDPLALGPFPSLNRPQNQVFCQGSPWSISNCNNTS 366
Query: 121 SQDQCLPLSLICLEPQRXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGS 180
SQDQCLPLSLICLEPQR RLQLVPGHEGLRCTGVVEFYNGS
Sbjct: 367 SQDQCLPLSLICLEPQRTTPPPTTTPPTTVPEPTAPPRLQLVPGHEGLRCTGVVEFYNGS 546
Query: 181 WGGTILYKAKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAP 240
WGGTILYKAKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAP
Sbjct: 547 WGGTILYKAKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAP 726
Query: 241 NGSCVSLQQCFQKTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEAL 300
NGSCVSLQQCFQKTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEAL
Sbjct: 727 NGSCVSLQQCFQKTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEAL 906
Query: 301 CDSSAARGRGRWEELCREQQCGDLISFHTVDADKTSPGFLCAQEKLSQCYHLQKKKHCNK 360
CDSSAARGRGRWEELCREQQCGDLISFHTVDADKTSPGFLCAQEKLSQCYHLQKKKHCNK
Sbjct: 907 CDSSAARGRGRWEELCREQQCGDLISFHTVDADKTSPGFLCAQEKLSQCYHLQKKKHCNK 1086
Query: 361 RVFVTCQDPNPAGLAPGTVASIIXXXXXXXXXXAMCGPLVYXXXXXXXXXXXXXXWIGPT 420
RVFVTCQDPNPAGLAPGTVASII AMCGPLVY WIGPT
Sbjct: 1087RVFVTCQDPNPAGLAPGTVASIILTLVLLVVLLAMCGPLVYKKLVKKFRQKKQRQWIGPT 1266
Query: 421 GVNQNMSFHRSHTATVRSQVENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSTQPDN 480
GVNQNMSFHRSHTATVRSQVENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSTQPDN
Sbjct: 1267GVNQNMSFHRSHTATVRSQVENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSTQPDN 1446
Query: 481 SSDSDYDLQVAQRL 494
SSDSDYDLQVAQRL
Sbjct: 1447SSDSDYDLQVAQRL 1488
>gb|M15177.1|MUSLY1A Mouse lymphocyte differentiation antigen Ly-1 mRNA, complete cds
Length = 1945
Score = 895 bits (2314), Expect = 0.0
Identities = 437/494 (88%), Positives = 437/494 (88%)
Frame = +1
Query: 1 MDSHEVXXXXXXXXXXXXXFCLGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCS 60
MDSHEV FCLGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCS
Sbjct: 7 MDSHEVLLAATYLLGTLAAFCLGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCS 186
Query: 61 SSWRLSQDHSKNAQQASAVCKQLRCGDPLALGPFPSLNRPQNQVFCQGSPWSISNCNNTS 120
SSWRLSQDHSKNAQQASAVCKQLRCGDPLALGPFPSLNRPQNQVFCQGSPWSISNCNNTS
Sbjct: 187 SSWRLSQDHSKNAQQASAVCKQLRCGDPLALGPFPSLNRPQNQVFCQGSPWSISNCNNTS 366
Query: 121 SQDQCLPLSLICLEPQRXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGS 180
SQDQCLPLSLICLEPQR RLQLVPGHEGLRCTGVVEFYNGS
Sbjct: 367 SQDQCLPLSLICLEPQRTTPPPTTTPPTTVPEPTAPPRLQLVPGHEGLRCTGVVEFYNGS 546
Query: 181 WGGTILYKAKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAP 240
WGGTILYKAKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAP
Sbjct: 547 WGGTILYKAKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAP 726
Query: 241 NGSCVSLQQCFQKTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEAL 300
NGSCVSLQQCFQKTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEAL
Sbjct: 727 NGSCVSLQQCFQKTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEAL 906
Query: 301 CDSSAARGRGRWEELCREQQCGDLISFHTVDADKTSPGFLCAQEKLSQCYHLQKKKHCNK 360
CDSSAARGRGRWEELCREQQCGDLISFHTVDADKTSPGFLCAQEKLSQCYHLQKKKHCNK
Sbjct: 907 CDSSAARGRGRWEELCREQQCGDLISFHTVDADKTSPGFLCAQEKLSQCYHLQKKKHCNK 1086
Query: 361 RVFVTCQDPNPAGLAPGTVASIIXXXXXXXXXXAMCGPLVYXXXXXXXXXXXXXXWIGPT 420
RVFVTCQDPNPAGLAPGTVASII AMCGPLVY WIGPT
Sbjct: 1087RVFVTCQDPNPAGLAPGTVASIILTLVLLVVLLAMCGPLVYKKLVKKFRQKKQRQWIGPT 1266
Query: 421 GVNQNMSFHRSHTATVRSQVENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSTQPDN 480
GVNQNMSFHRSHTATVRSQVENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSTQPDN
Sbjct: 1267GVNQNMSFHRSHTATVRSQVENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSTQPDN 1446
Query: 481 SSDSDYDLQVAQRL 494
SSDSDYDLQVAQRL
Sbjct: 1447SSDSDYDLQVAQRL 1488
>gb|BC011258.1|BC011258 Mus musculus, Similar to CD5 antigen, clone MGC:18786
IMAGE:4188683, mRNA, complete cds
Length = 2083
Score = 894 bits (2311), Expect = 0.0
Identities = 436/494 (88%), Positives = 437/494 (88%)
Frame = +3
Query: 1 MDSHEVXXXXXXXXXXXXXFCLGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCS 60
MDSHEV FCLGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCS
Sbjct: 129 MDSHEVLLAATYLLGTLAAFCLGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCS 308
Query: 61 SSWRLSQDHSKNAQQASAVCKQLRCGDPLALGPFPSLNRPQNQVFCQGSPWSISNCNNTS 120
SSWRLSQDHSKNAQQASAVCK+LRCGDPLALGPFPSLNRPQNQVFCQGSPWSISNCNNTS
Sbjct: 309 SSWRLSQDHSKNAQQASAVCKELRCGDPLALGPFPSLNRPQNQVFCQGSPWSISNCNNTS 488
Query: 121 SQDQCLPLSLICLEPQRXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGS 180
SQDQCLPLSLICLEPQR RLQLVPGHEGLRCTGVVEFYNGS
Sbjct: 489 SQDQCLPLSLICLEPQRTTPPPTTTPPTTVPEPTAPPRLQLVPGHEGLRCTGVVEFYNGS 668
Query: 181 WGGTILYKAKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAP 240
WGGTILYKAKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAP
Sbjct: 669 WGGTILYKAKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAP 848
Query: 241 NGSCVSLQQCFQKTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEAL 300
NGSCVSLQQCFQKTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEAL
Sbjct: 849 NGSCVSLQQCFQKTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEAL 1028
Query: 301 CDSSAARGRGRWEELCREQQCGDLISFHTVDADKTSPGFLCAQEKLSQCYHLQKKKHCNK 360
CDSSAARGRGRWEELCREQQCGDLISFHTVDADKTSPGFLCAQEKLSQCYHLQKKKHCNK
Sbjct: 1029CDSSAARGRGRWEELCREQQCGDLISFHTVDADKTSPGFLCAQEKLSQCYHLQKKKHCNK 1208
Query: 361 RVFVTCQDPNPAGLAPGTVASIIXXXXXXXXXXAMCGPLVYXXXXXXXXXXXXXXWIGPT 420
RVFVTCQDPNPAGLAPGTVASII AMCGPLVY WIGPT
Sbjct: 1209RVFVTCQDPNPAGLAPGTVASIILTLVLLVVLLAMCGPLVYKKLVKKFRQKKQRQWIGPT 1388
Query: 421 GVNQNMSFHRSHTATVRSQVENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSTQPDN 480
GVNQNMSFHRSHTATVRSQVENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSTQPDN
Sbjct: 1389GVNQNMSFHRSHTATVRSQVENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSTQPDN 1568
Query: 481 SSDSDYDLQVAQRL 494
SSDSDYDLQVAQRL
Sbjct: 1569SSDSDYDLQVAQRL 1610
>gb|U65961.1|MMU65961 Mus musculus CD5.1 mRNA, complete cds
Length = 1501
Score = 890 bits (2300), Expect = 0.0
Identities = 434/494 (87%), Positives = 435/494 (87%)
Frame = +1
Query: 1 MDSHEVXXXXXXXXXXXXXFCLGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCS 60
MDSHEV FCLGQSGRGGLD+QVMLSGSNSKCQGQVEIQMENKWKTVCS
Sbjct: 7 MDSHEVLLAATYLLGTLAAFCLGQSGRGGLDVQVMLSGSNSKCQGQVEIQMENKWKTVCS 186
Query: 61 SSWRLSQDHSKNAQQASAVCKQLRCGDPLALGPFPSLNRPQNQVFCQGSPWSISNCNNTS 120
SSWRLSQDHSKNAQ ASAVCKQLRCGDPLALGP PSLNRPQNQVFCQGSPWSISNCNNTS
Sbjct: 187 SSWRLSQDHSKNAQLASAVCKQLRCGDPLALGPIPSLNRPQNQVFCQGSPWSISNCNNTS 366
Query: 121 SQDQCLPLSLICLEPQRXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGS 180
SQDQCLPLSLICLEPQR RLQLVPGHEGLRCTGVVEFYNGS
Sbjct: 367 SQDQCLPLSLICLEPQRTTPPPTTTPPTTVPEPTAPPRLQLVPGHEGLRCTGVVEFYNGS 546
Query: 181 WGGTILYKAKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAP 240
WGGTILYKAKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAP
Sbjct: 547 WGGTILYKAKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAP 726
Query: 241 NGSCVSLQQCFQKTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEAL 300
NGSCVSLQQCFQKTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEAL
Sbjct: 727 NGSCVSLQQCFQKTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEAL 906
Query: 301 CDSSAARGRGRWEELCREQQCGDLISFHTVDADKTSPGFLCAQEKLSQCYHLQKKKHCNK 360
CDSSAARGRGRWEELCREQQCGDLISFHTVDADKTSPGFLCAQEKLSQCYHLQKKKHCNK
Sbjct: 907 CDSSAARGRGRWEELCREQQCGDLISFHTVDADKTSPGFLCAQEKLSQCYHLQKKKHCNK 1086
Query: 361 RVFVTCQDPNPAGLAPGTVASIIXXXXXXXXXXAMCGPLVYXXXXXXXXXXXXXXWIGPT 420
RVFVTCQDPNPAGLAPGTVASII AMCGPLVY WIGPT
Sbjct: 1087RVFVTCQDPNPAGLAPGTVASIILTLVLLVVLLAMCGPLVYKKLVKKFRQKKQRQWIGPT 1266
Query: 421 GVNQNMSFHRSHTATVRSQVENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSTQPDN 480
GVNQNMSFHRSHTATVRSQVENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSTQPDN
Sbjct: 1267GVNQNMSFHRSHTATVRSQVENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSTQPDN 1446
Query: 481 SSDSDYDLQVAQRL 494
SSDSDYDLQVAQRL
Sbjct: 1447SSDSDYDLQVAQRL 1488
>ref|NM_019295.1| Rattus norvegicus Lymphocyte antigen CD5 (Cd5), mRNA
Length = 2059
Score = 744 bits (1920), Expect = 0.0
Identities = 371/494 (75%), Positives = 391/494 (79%)
Frame = +3
Query: 1 MDSHEVXXXXXXXXXXXXXFCLGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCS 60
MDSHEV FCLGQSGRG + QVMLSGSNSKCQG VE+QM N KTVCS
Sbjct: 90 MDSHEVLLAATYLLGTLAAFCLGQSGRGFVGAQVMLSGSNSKCQGLVEVQM-NGMKTVCS 266
Query: 61 SSWRLSQDHSKNAQQASAVCKQLRCGDPLALGPFPSLNRPQNQVFCQGSPWSISNCNNTS 120
SSWRLSQD KNA +AS VC+QL CG+PLALG NRP+NQ+ CQG PWS SNC+ TS
Sbjct: 267 SSWRLSQDLWKNANEASTVCQQLGCGNPLALGHLTLWNRPKNQILCQGPPWSFSNCS-TS 443
Query: 121 SQDQCLPLSLICLEPQRXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGS 180
S QCLPLSL+CLEPQ+ RLQLVPGHEGLRCTGVVEFYNGS
Sbjct: 444 SLGQCLPLSLVCLEPQKTTPLPTTTLPTTMPEPTAPPRLQLVPGHEGLRCTGVVEFYNGS 623
Query: 181 WGGTILYKAKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAP 240
GGTILYKAK RP+ LGNLICKSLQCGSFLTHLS E AGTPAPAELRDPRPLPIRWEA
Sbjct: 624 RGGTILYKAKARPVDLGNLICKSLQCGSFLTHLSRIETAGTPAPAELRDPRPLPIRWEAQ 803
Query: 241 NGSCVSLQQCFQKTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEAL 300
NGSC SLQQCFQKTT QEG QAL V+CSDFQPKVQSRLVGGSSVCEGIAEVRQRSQW AL
Sbjct: 804 NGSCTSLQQCFQKTTVQEGSQALAVVCSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWAAL 983
Query: 301 CDSSAARGRGRWEELCREQQCGDLISFHTVDADKTSPGFLCAQEKLSQCYHLQKKKHCNK 360
CDSSAARG GRWEELC+EQQCG+LISFH +DAD+TSPG LC QEKLSQCY LQKK HC K
Sbjct: 984 CDSSAARGPGRWEELCQEQQCGNLISFHVMDADRTSPGVLCTQEKLSQCYQLQKKTHC-K 1160
Query: 361 RVFVTCQDPNPAGLAPGTVASIIXXXXXXXXXXAMCGPLVYXXXXXXXXXXXXXXWIGPT 420
RVF+TC+DPNP GLAPGTVASII MCGPL+Y WIGPT
Sbjct: 1161RVFITCKDPNPVGLAPGTVASIILTLVLLVVLMVMCGPLIYKKLVKKFRQKKQRQWIGPT 1340
Query: 421 GVNQNMSFHRSHTATVRSQVENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSTQPDN 480
GVNQ+MSFHRSHTATVRSQVENP ASHVDNEYSQPPRNS LSAYPALEGALHRSSTQPDN
Sbjct: 1341GVNQSMSFHRSHTATVRSQVENPAASHVDNEYSQPPRNSRLSAYPALEGALHRSSTQPDN 1520
Query: 481 SSDSDYDLQVAQRL 494
SSDSDYDLQVAQRL
Sbjct: 1521SSDSDYDLQVAQRL 1562
>dbj|D10728.1|RATLACD5 Rat mRNA for lymphocyte antigen CD5, complete cds
Length = 2059
Score = 744 bits (1920), Expect = 0.0
Identities = 371/494 (75%), Positives = 391/494 (79%)
Frame = +3
Query: 1 MDSHEVXXXXXXXXXXXXXFCLGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCS 60
MDSHEV FCLGQSGRG + QVMLSGSNSKCQG VE+QM N KTVCS
Sbjct: 90 MDSHEVLLAATYLLGTLAAFCLGQSGRGFVGAQVMLSGSNSKCQGLVEVQM-NGMKTVCS 266
Query: 61 SSWRLSQDHSKNAQQASAVCKQLRCGDPLALGPFPSLNRPQNQVFCQGSPWSISNCNNTS 120
SSWRLSQD KNA +AS VC+QL CG+PLALG NRP+NQ+ CQG PWS SNC+ TS
Sbjct: 267 SSWRLSQDLWKNANEASTVCQQLGCGNPLALGHLTLWNRPKNQILCQGPPWSFSNCS-TS 443
Query: 121 SQDQCLPLSLICLEPQRXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGS 180
S QCLPLSL+CLEPQ+ RLQLVPGHEGLRCTGVVEFYNGS
Sbjct: 444 SLGQCLPLSLVCLEPQKTTPLPTTTLPTTMPEPTAPPRLQLVPGHEGLRCTGVVEFYNGS 623
Query: 181 WGGTILYKAKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAP 240
GGTILYKAK RP+ LGNLICKSLQCGSFLTHLS E AGTPAPAELRDPRPLPIRWEA
Sbjct: 624 RGGTILYKAKARPVDLGNLICKSLQCGSFLTHLSRIETAGTPAPAELRDPRPLPIRWEAQ 803
Query: 241 NGSCVSLQQCFQKTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEAL 300
NGSC SLQQCFQKTT QEG QAL V+CSDFQPKVQSRLVGGSSVCEGIAEVRQRSQW AL
Sbjct: 804 NGSCTSLQQCFQKTTVQEGSQALAVVCSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWAAL 983
Query: 301 CDSSAARGRGRWEELCREQQCGDLISFHTVDADKTSPGFLCAQEKLSQCYHLQKKKHCNK 360
CDSSAARG GRWEELC+EQQCG+LISFH +DAD+TSPG LC QEKLSQCY LQKK HC K
Sbjct: 984 CDSSAARGPGRWEELCQEQQCGNLISFHVMDADRTSPGVLCTQEKLSQCYQLQKKTHC-K 1160
Query: 361 RVFVTCQDPNPAGLAPGTVASIIXXXXXXXXXXAMCGPLVYXXXXXXXXXXXXXXWIGPT 420
RVF+TC+DPNP GLAPGTVASII MCGPL+Y WIGPT
Sbjct: 1161RVFITCKDPNPVGLAPGTVASIILTLVLLVVLMVMCGPLIYKKLVKKFRQKKQRQWIGPT 1340
Query: 421 GVNQNMSFHRSHTATVRSQVENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSTQPDN 480
GVNQ+MSFHRSHTATVRSQVENP ASHVDNEYSQPPRNS LSAYPALEGALHRSSTQPDN
Sbjct: 1341GVNQSMSFHRSHTATVRSQVENPAASHVDNEYSQPPRNSRLSAYPALEGALHRSSTQPDN 1520
Query: 481 SSDSDYDLQVAQRL 494
SSDSDYDLQVAQRL
Sbjct: 1521SSDSDYDLQVAQRL 1562
>emb|X78985.1|RNCD5RN R.norvegicus CD5 mRNA
Length = 1503
Score = 700 bits (1807), Expect = 0.0
Identities = 359/506 (70%), Positives = 382/506 (74%), Gaps = 12/506 (2%)
Frame = +1
Query: 1 MDSHEVXXXXXXXXXXXXXFCLGQSGRGG------------LDIQVMLSGSNSKCQGQVE 48
MDSHEV FCLGQSGR G + QVMLSGSNSKCQG VE
Sbjct: 1 MDSHEVLLAATYLLGTLAAFCLGQSGRDGPGKKEHEKGRGFVGAQVMLSGSNSKCQGLVE 180
Query: 49 IQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLALGPFPSLNRPQNQVFCQG 108
+QM N KTVCSSSWRLSQD KNA +AS VC+QL CG+PLALG NRP+NQ+ CQG
Sbjct: 181 VQM-NGMKTVCSSSWRLSQDLWKNANEASTVCQQLGCGNPLALGHLTLWNRPKNQILCQG 357
Query: 109 SPWSISNCNNTSSQDQCLPLSLICLEPQRXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGL 168
PWS SNC+ TSS QCLPLSL+CLEPQ+ RLQLVPGHEGL
Sbjct: 358 PPWSFSNCS-TSSLGQCLPLSLVCLEPQKTTPLPTTTLPTTMPEPTAPPRLQLVPGHEGL 534
Query: 169 RCTGVVEFYNGSWGGTILYKAKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELR 228
RCTGVVEFYNGS GGTILYKAK RP+ LGNLICKSLQCGSFLTHLS E A +ELR
Sbjct: 535 RCTGVVEFYNGSRGGTILYKAKARPVDLGNLICKSLQCGSFLTHLSRIETAELQLCSELR 714
Query: 229 DPRPLPIRWEAPNGSCVSLQQCFQKTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGI 288
DPRPLPIRWEA NGSC SLQQCFQKTT QEG QAL V+CSDFQPKVQSRLVGGSSVCEGI
Sbjct: 715 DPRPLPIRWEAQNGSCTSLQQCFQKTTVQEGSQALAVVCSDFQPKVQSRLVGGSSVCEGI 894
Query: 289 AEVRQRSQWEALCDSSAARGRGRWEELCREQQCGDLISFHTVDADKTSPGFLCAQEKLSQ 348
AEVRQRSQW ALCDSSAARG GRWEELC+EQQCG+LISFH +DAD+TSPG LC QEKLSQ
Sbjct: 895 AEVRQRSQWAALCDSSAARGPGRWEELCQEQQCGNLISFHVMDADRTSPGVLCTQEKLSQ 1074
Query: 349 CYHLQKKKHCNKRVFVTCQDPNPAGLAPGTVASIIXXXXXXXXXXAMCGPLVYXXXXXXX 408
CY LQKK HC KRVF+TC+DPNP PGTVASII MCGPL+Y
Sbjct: 1075CYQLQKKTHC-KRVFITCKDPNPVAW-PGTVASIILTLVLLVVLMVMCGPLIYKKLVKKF 1248
Query: 409 XXXXXXXWIGPTGVNQNMSFHRSHTATVRSQVENPTASHVDNEYSQPPRNSHLSAYPALE 468
WIGPTGVNQ+MSFHRSHTATVRSQVENP ASH+DNEYSQPPRNS SAYPALE
Sbjct: 1249RQKKQRQWIGPTGVNQSMSFHRSHTATVRSQVENPAASHMDNEYSQPPRNS-WSAYPALE 1425
Query: 469 GALHRSSTQPDNSSDSDYDLQVAQRL 494
GALHRSSTQPDNSSDSDYDLQVAQ+L
Sbjct: 1426GALHRSSTQPDNSSDSDYDLQVAQKL 1503
>ref|NM_014207.1| Homo sapiens CD5 antigen (p56-62) (CD5), mRNA
Length = 2320
Score = 525 bits (1352), Expect = e-147
Identities = 265/475 (55%), Positives = 313/475 (65%), Gaps = 1/475 (0%)
Frame = +1
Query: 21 CLGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVC 80
CLG+ D Q L+ SNSKCQGQ+E+ +++ W VCS SW S ++ QAS VC
Sbjct: 136 CLGRLSWYDPDFQARLTRSNSKCQGQLEVYLKDGWHMVCSQSWGRSSKQWEDPSQASKVC 315
Query: 81 KQLRCGDPLALGPFPSLNRPQNQVFCQGSPWSISNCNNTSSQDQCLPLSLICLEPQRXXX 140
++L CG PL+LGPF PQ+ + C G S SNC++ S D C L L CLEPQ+
Sbjct: 316 QRLNCGVPLSLGPFLVTYTPQSSIICYGQLGSFSNCSH-SRNDMCHSLGLTCLEPQKTTP 492
Query: 141 XXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGSWGGTILYKAKDRPLGLGNLI 200
RLQLV G C GVVEFY+GS GGTI Y+A+D+ L N +
Sbjct: 493 PTTRPPPTTTPEPTAPPRLQLVAQSGGQHCAGVVEFYSGSLGGTISYEAQDKTQDLENFL 672
Query: 201 CKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCFQKTTAQEGG 260
C +LQCGSFL HL TEA P E R+ +PLPI+W+ N SC SL+ CF+K Q+ G
Sbjct: 673 CNNLQCGSFLKHLPETEAGRAQDPGEPREHQPLPIQWKIQNSSCTSLEHCFRKIKPQKSG 852
Query: 261 QALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRWEELCREQQ 320
+ L ++CS FQPKVQSRLVGGSS+CEG EVRQ +QW ALCDSS+AR RWEE+CREQQ
Sbjct: 853 RVLALLCSGFQPKVQSRLVGGSSICEGTVEVRQGAQWAALCDSSSARSSLRWEEVCREQQ 1032
Query: 321 CGDLISFHTVDA-DKTSPGFLCAQEKLSQCYHLQKKKHCNKRVFVTCQDPNPAGLAPGTV 379
CG + S+ +DA D TS G C +KLSQC+ L ++ K+VFVTCQDPNPAGLA GTV
Sbjct: 1033CGSVNSYRVLDAGDPTSRGLFCPHQKLSQCHELWERNSYCKKVFVTCQDPNPAGLAAGTV 1212
Query: 380 ASIIXXXXXXXXXXAMCGPLVYXXXXXXXXXXXXXXWIGPTGVNQNMSFHRSHTATVRSQ 439
ASII +CGPL Y WIGPTG+NQNMSFHR+HTATVRS
Sbjct: 1213ASIILALVLLVVLLVVCGPLAYKKLVKKFRQKKQRQWIGPTGMNQNMSFHRNHTATVRSH 1392
Query: 440 VENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSTQPDNSSDSDYDLQVAQRL 494
ENPTASHVDNEYSQPPRNS LSAYPALEG LHRSS QPDNSSDSDYDL AQRL
Sbjct: 1393AENPTASHVDNEYSQPPRNSRLSAYPALEGVLHRSSMQPDNSSDSDYDLHGAQRL 1557
>emb|X04391.1|HSTIR Human mRNA for lymphocyte glycoprotein T1/Leu-1
Length = 2320
Score = 525 bits (1352), Expect = e-147
Identities = 265/475 (55%), Positives = 313/475 (65%), Gaps = 1/475 (0%)
Frame = +1
Query: 21 CLGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVC 80
CLG+ D Q L+ SNSKCQGQ+E+ +++ W VCS SW S ++ QAS VC
Sbjct: 136 CLGRLSWYDPDFQARLTRSNSKCQGQLEVYLKDGWHMVCSQSWGRSSKQWEDPSQASKVC 315
Query: 81 KQLRCGDPLALGPFPSLNRPQNQVFCQGSPWSISNCNNTSSQDQCLPLSLICLEPQRXXX 140
++L CG PL+LGPF PQ+ + C G S SNC++ S D C L L CLEPQ+
Sbjct: 316 QRLNCGVPLSLGPFLVTYTPQSSIICYGQLGSFSNCSH-SRNDMCHSLGLTCLEPQKTTP 492
Query: 141 XXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGSWGGTILYKAKDRPLGLGNLI 200
RLQLV G C GVVEFY+GS GGTI Y+A+D+ L N +
Sbjct: 493 PTTRPPPTTTPEPTAPPRLQLVAQSGGQHCAGVVEFYSGSLGGTISYEAQDKTQDLENFL 672
Query: 201 CKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCFQKTTAQEGG 260
C +LQCGSFL HL TEA P E R+ +PLPI+W+ N SC SL+ CF+K Q+ G
Sbjct: 673 CNNLQCGSFLKHLPETEAGRAQDPGEPREHQPLPIQWKIQNSSCTSLEHCFRKIKPQKSG 852
Query: 261 QALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRWEELCREQQ 320
+ L ++CS FQPKVQSRLVGGSS+CEG EVRQ +QW ALCDSS+AR RWEE+CREQQ
Sbjct: 853 RVLALLCSGFQPKVQSRLVGGSSICEGTVEVRQGAQWAALCDSSSARSSLRWEEVCREQQ 1032
Query: 321 CGDLISFHTVDA-DKTSPGFLCAQEKLSQCYHLQKKKHCNKRVFVTCQDPNPAGLAPGTV 379
CG + S+ +DA D TS G C +KLSQC+ L ++ K+VFVTCQDPNPAGLA GTV
Sbjct: 1033CGSVNSYRVLDAGDPTSRGLFCPHQKLSQCHELWERNSYCKKVFVTCQDPNPAGLAAGTV 1212
Query: 380 ASIIXXXXXXXXXXAMCGPLVYXXXXXXXXXXXXXXWIGPTGVNQNMSFHRSHTATVRSQ 439
ASII +CGPL Y WIGPTG+NQNMSFHR+HTATVRS
Sbjct: 1213ASIILALVLLVVLLVVCGPLAYKKLVKKFRQKKQRQWIGPTGMNQNMSFHRNHTATVRSH 1392
Query: 440 VENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSTQPDNSSDSDYDLQVAQRL 494
ENPTASHVDNEYSQPPRNS LSAYPALEG LHRSS QPDNSSDSDYDL AQRL
Sbjct: 1393AENPTASHVDNEYSQPPRNSRLSAYPALEGVLHRSSMQPDNSSDSDYDLHGAQRL 1557
>emb|X53061.1|BTCD5A Bovine mRNA for CD5 antigen
Length = 1953
Score = 437 bits (1124), Expect = e-120
Identities = 243/477 (50%), Positives = 291/477 (60%), Gaps = 10/477 (2%)
Frame = +2
Query: 28 GGLDIQVM-----LSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQ 82
GGL ++V LSGS S+CQG++E+ +W V S SW + +Q +C++
Sbjct: 104 GGLKVEVQGLTMRLSGSGSRCQGRLEVSNGTEWYAVHSQSWGQLSLYQVAPRQFLKLCQE 283
Query: 83 LRCGDPLALGPFPSLNRPQNQ--VFCQGSPWSISNCNNTSSQDQCLPLSLICLEPQRXXX 140
L+C DPL L Q Q + C G S SNC+ + Q L+LICLEP R
Sbjct: 284 LQCRDPLLLSSSRYFKEVQFQKLIICHGQLGSFSNCSLNRGR-QVDSLALICLEPPRTTA 460
Query: 141 XXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGSWGGTILYKAKDRPLGLGNLI 200
R QLV GLRC GVVEFY+G GGTI + ++ LG LI
Sbjct: 461 PPTTSPPTTTPEPTAPPRFQLVAEPGGLRCAGVVEFYSGGLGGTIGIEPQNDIKDLGQLI 640
Query: 201 CKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCFQKTTAQEGG 260
C +LQCGSFL L TE A T P RPLPIRWE N C SL+QCF+K GG
Sbjct: 641 CAALQCGSFLKPLPETEEAQTQKP---EGQRPLPIRWEIQNPKCTSLEQCFRKVQPWVGG 811
Query: 261 QALTVICSDFQPKVQSRLVGGSSVCEGIAEVR--QRSQWEALCDSSAARGRGRWEELCRE 318
QAL +ICSDFQPKVQSRLVGGS VCEG EVR + +W+ LCD S A+G R E+CRE
Sbjct: 812 QALGLICSDFQPKVQSRLVGGSDVCEGSVEVRSGKGQKWDTLCDDSWAKGTARRVEVCRE 991
Query: 319 QQCGDLISFHTVD-ADKTSPGFLCAQEKLSQCYHLQKKKHCNKRVFVTCQDPNPAGLAPG 377
QQCG++ S+ +D ++KT GF C LS+C+ L++KK KRVFVTCQ+ + AGL G
Sbjct: 992 QQCGNVSSYRGLDPSEKTLGGFYCPPGILSRCHKLEEKKSHCKRVFVTCQNSSRAGLGAG 1171
Query: 378 TVASIIXXXXXXXXXXAMCGPLVYXXXXXXXXXXXXXXWIGPTGVNQNMSFHRSHTATVR 437
V SII +CGPL Y WIGPTG+NQNMSFHR+HT TVR
Sbjct: 1172PVMSIILALLLLAVLLVVCGPLAYKKVVKKFRQKKQRQWIGPTGMNQNMSFHRNHTVTVR 1351
Query: 438 SQVENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSTQPDNSSDSDYDLQVAQRL 494
SQVEN TASHV+NEYSQPPRNS +SAYPALEGALHR STQPDNSSDSDY+L AQRL
Sbjct: 1352SQVENATASHVENEYSQPPRNSQISAYPALEGALHRISTQPDNSSDSDYELHGAQRL 1522
>gb|M97195.1|SHPDCC5 Ovis aries Merino CD5 mRNA, partial cds
Length = 1793
Score = 421 bits (1083), Expect = e-116
Identities = 231/446 (51%), Positives = 273/446 (60%), Gaps = 5/446 (1%)
Frame = +2
Query: 54 KWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLALGPFPSL-NRP-QNQVFCQGSPW 111
+W V SW S + +Q +C++L+C DPL L +RP Q + C G
Sbjct: 2 EWYAVHGQSWGQSSLYQVMPKQFFKLCQKLQCRDPLLLSSLHHFKDRPFQKLMICHGQLG 181
Query: 112 SISNCNNTSSQDQCLPLSLICLEPQRXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCT 171
S SNC+ Q PL+LIC EP R R QLV GLRC
Sbjct: 182 SFSNCSLNRGH-QVGPLALICSEPPRTTAPPTTSPPTTTPEPTAPPRFQLVAEPGGLRCA 358
Query: 172 GVVEFYNGSWGGTILYKAKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPR 231
G+VEFY+G GGTI + +D LG LIC +LQCGSFL L TE A TP P R
Sbjct: 359 GLVEFYSGGVGGTIGIEPQDEIKDLGQLICAALQCGSFLKPLPETEEAQTPKPG---GQR 529
Query: 232 PLPIRWEAPNGSCVSLQQCFQKTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEV 291
PLPIRWE N C SL+QCF+K + GGQAL +ICSDFQPKVQSRLVGGS +CEG EV
Sbjct: 530 PLPIRWEIQNPRCNSLEQCFRKVQPRAGGQALGLICSDFQPKVQSRLVGGSDMCEGSVEV 709
Query: 292 R--QRSQWEALCDSSAARGRGRWEELCREQQCGDLISFHTVD-ADKTSPGFLCAQEKLSQ 348
R + QW+ LCDSS A+G RWEE+CREQQCG++ + +D ++KT G C LSQ
Sbjct: 710 RSGKGQQWDTLCDSSWAKGTARWEEVCREQQCGNVSFYQGLDPSEKTLGGLYCPSGILSQ 889
Query: 349 CYHLQKKKHCNKRVFVTCQDPNPAGLAPGTVASIIXXXXXXXXXXAMCGPLVYXXXXXXX 408
C+ L++KK KRVFVTCQ+ + AGL G V SII +CGPL Y
Sbjct: 890 CHKLEEKKSYCKRVFVTCQNSSRAGLGVGAVMSIILALVLLAVLLVVCGPLAYKKVVKKF 1069
Query: 409 XXXXXXXWIGPTGVNQNMSFHRSHTATVRSQVENPTASHVDNEYSQPPRNSHLSAYPALE 468
WIGPTG+NQNMSFHR+HT TV SQ EN TASHV+NEYSQPPRNS +SAYPALE
Sbjct: 1070RQKKQRQWIGPTGMNQNMSFHRNHTVTVWSQAENATASHVENEYSQPPRNSQISAYPALE 1249
Query: 469 GALHRSSTQPDNSSDSDYDLQVAQRL 494
GALHR ST PDNSSDSDY+L AQRL
Sbjct: 1250GALHRISTHPDNSSDSDYELHGAQRL 1327
>emb|Y12011.1|GGCD5 Gallus gallus CD5 mRNA
Length = 1999
Score = 235 bits (599), Expect = 8e-60
Identities = 174/485 (35%), Positives = 223/485 (45%), Gaps = 13/485 (2%)
Frame = +1
Query: 23 GQSGR--GGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVC 80
GQ G G + + LSG +C G +E+QM ++W VC W + +VC
Sbjct: 79 GQRGAVLGAAEKPLRLSGGGCRCAGLLEVQMSSRWSPVC---W--------DGVSPGSVC 225
Query: 81 KQLRCGDPLALGPFPSLNRPQNQ--VFCQGSP---WSISNCNNTSSQDQCLPLSLICLEP 135
+QL C P L P Q + C+G W +NC+ + + C EP
Sbjct: 226 EQLGCRPPAKLSSAPPDLEEQQAWAMQCKGMERCQWKAANCSQHAV--------VTCSEP 381
Query: 136 QRXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFY-NGSWGGTILYKAKDRPL 194
+ L+LV G+ C+G VE + G WG L + D
Sbjct: 382 EPTSTKPPSVPPTTSPEPTGAPWLRLVDGN--FSCSGFVELHLRGRWGAVAL--SPDVWP 549
Query: 195 GLGNLICKSLQCGSFLTHLSGTEAAGTPA-PAELRDPRPLPIRWEAPNG-SCVSLQQCFQ 252
L IC+ L C + SG G P L LP+RWEA S L CF
Sbjct: 550 ELPARICRELGCNN----PSGVPMGGPMGGPVSLPPQSRLPVRWEAVAPCSSPELLDCFN 717
Query: 253 KTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRW 312
T+ G + +IC QP+ RL GG + CEG EV QR QW LCD A R R
Sbjct: 718 WTSHGHGKASAFLICPGSQPRAGRRLAGGPTPCEGHIEVFQRGQWHTLCDEQAHRVE-RG 894
Query: 313 EELCREQQCGDLISFHTVDADKTSPGFLCAQEKLSQCYHLQKKKHCNKRVFVTCQD--PN 370
+LCRE +CGDL S + + G +C + L C ++ H R V CQ P
Sbjct: 895 HQLCRELRCGDLSSSAELQEPRAG-GVICKERYLHLCPESPEEVHGCSRTHVVCQKSKPP 1071
Query: 371 PAGLAPGTVASIIXXXXXXXXXXAMCGPLVYXXXXXXXXXXXXXXWIGPTGVNQNMSFHR 430
PAG APGTVASI +CGP Y WIGPTG++Q++SFHR
Sbjct: 1072PAGTAPGTVASICLALLLLGVLLLICGPPAYRRLMKRISKKKQRQWIGPTGLHQSVSFHR 1251
Query: 431 SHTATVRSQV-ENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSTQPDNSSDSDYDLQ 489
+ T T R +V E A DN+Y+QPP+ S SAYPALEGA R+S PDNSSDSDYDL
Sbjct: 1252NSTVTPRVRVEEQQRARRGDNDYAQPPQKSP-SAYPALEGAA-RASGAPDNSSDSDYDLH 1425
Query: 490 VAQRL 494
A RL
Sbjct: 1426SAHRL 1440
>gb|AF291867.1|AF291867 Sus scrofa CD5 antigen gene, partial cds
Length = 222
Score = 139 bits (351), Expect = 5e-31
Identities = 66/70 (94%), Positives = 66/70 (94%)
Frame = +2
Query: 416 WIGPTGVNQNMSFHRSHTATVRSQVENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSS 475
WIGPTGVNQNMSFHRSHT TVRSQVENP ASHVDNEYSQPPRNSHLSAYPALEGALHRSS
Sbjct: 11 WIGPTGVNQNMSFHRSHTVTVRSQVENPPASHVDNEYSQPPRNSHLSAYPALEGALHRSS 190
Query: 476 TQPDNSSDSD 485
T PD SSDSD
Sbjct: 191 TLPDYSSDSD 220
>emb|AJ237929.1|HSA237929 Homo sapiens CD5 gene, exon 6
Length = 934
Score = 132 bits (331), Expect = 1e-28
Identities = 63/101 (62%), Positives = 76/101 (74%), Gaps = 1/101 (0%)
Frame = +3
Query: 268 SDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRWEELCREQQCGDLISF 327
S FQPKVQSRLVGGSS+CEG EVRQ +QW ALCDSS+AR RWEE+CREQQCG + S+
Sbjct: 285 SGFQPKVQSRLVGGSSICEGTVEVRQGAQWAALCDSSSARSSLRWEEVCREQQCGSVNSY 464
Query: 328 HTVDA-DKTSPGFLCAQEKLSQCYHLQKKKHCNKRVFVTCQ 367
+DA D TS G C +KLSQC+ L ++ K+VFVTC+
Sbjct: 465 RVLDAGDPTSRGLFCPHQKLSQCHELWERNSYCKKVFVTCE 587
Score = 36.2 bits (82), Expect = 7.4
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +3
Query: 32 IQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCG 86
+Q L G +S C+G VE++ +W +C SS ++++ + VC++ +CG
Sbjct: 303 VQSRLVGGSSICEGTVEVRQGAQWAALCDSS------SARSSLRWEEVCREQQCG 449
>emb|AJ237928.1|HSA237928 Homo sapiens CD5 gene, exons 3, 4 and 5, partial
Length = 1808
Score = 124 bits (310), Expect = 3e-26
Identities = 62/128 (48%), Positives = 79/128 (61%), Gaps = 4/128 (3%)
Frame = +3
Query: 158 RLQLVPGHEGLRCTGVVEFYNGSWGGTILYKAKDRPLGLGNLICKSLQCGSFLTHLSGTE 217
RLQLV G C GVVEFY+GS GGTI Y+A+D+ L N +C +LQCGSFL HL TE
Sbjct: 1149 RLQLVAQSGGQHCAGVVEFYSGSLGGTISYEAQDKTQDLENFLCNNLQCGSFLKHLPETE 1328
Query: 218 AAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCFQKTTAQEGGQALTVICSDF----QPK 273
A P E R+ +PLPI+W+ N SC SL+ CF+K Q+ G+ L ++CS P
Sbjct: 1329 AGRAQDPGEPREHQPLPIQWKIQNSSCTSLEHCFRKIKPQKSGRVLALLCSGK*DWPSPM 1508
Query: 274 VQSRLVGG 281
S +GG
Sbjct: 1509 TPSAALGG 1532
Score = 99.4 bits (246), Expect = 7e-19
Identities = 48/103 (46%), Positives = 63/103 (60%)
Frame = +3
Query: 31 DIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLA 90
D Q L+ SNSKCQGQ+E+ +++ W VCS SW S ++ QAS VC++L CG PL+
Sbjct: 81 DFQARLTRSNSKCQGQLEVYLKDGWHMVCSQSWGRSSKQWEDPSQASKVCQRLNCGVPLS 260
Query: 91 LGPFPSLNRPQNQVFCQGSPWSISNCNNTSSQDQCLPLSLICL 133
LGPF PQ+ + C G S SNC++ S D C L L CL
Sbjct: 261 LGPFLVTYTPQSSIICYGQLGSFSNCSH-SRNDMCHSLGLTCL 386
Score = 38.5 bits (88), Expect = 1.5
Identities = 18/57 (31%), Positives = 27/57 (46%), Gaps = 6/57 (10%)
Frame = +3
Query: 272 PKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRWEE------LCREQQCG 322
P Q+RL +S C+G EV + W +C S R +WE+ +C+ CG
Sbjct: 78 PDFQARLTRSNSKCQGQLEVYLKDGWHMVCSQSWGRSSKQWEDPSQASKVCQRLNCG 248
>emb|AJ306429.1|GGA306429 Gallus gallus CD5 gene
Length = 3437
Score = 71.6 bits (174), Expect(2) = 2e-14
Identities = 85/353 (24%), Positives = 129/353 (36%), Gaps = 19/353 (5%)
Frame = +2
Query: 36 LSGSNSKCQGQVEIQMENKWKTVCSSS--WRLSQDHSKNAQQASAVCKQLRCGDPLAL-- 91
L N C G VE+ + +W V S W + + +C++L C +P +
Sbjct: 875 LVDGNFSCSGFVELHLRGRWGAVALSPDVW---------PELPARICRELGCNNPSGVPM 1027
Query: 92 -GPF--PSLNRPQNQVFCQGSPWSISNCNNTSSQDQCLPLSLICLEPQRXXXXXXXXXXX 148
GP P PQ+++ + +++ C++ P L C
Sbjct: 1028 GGPMGGPVSLPPQSRLPVRWE--AVAPCSS--------PELLDCFN-------------W 1138
Query: 149 XXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGSWGGTILY-KAKDRPLGLGNLICKSLQCG 207
+ PG R TG + + W + + KAK R LG L S C
Sbjct: 1139 TSHGHGKASAFLICPGE---RVTGAKDGWQ--WRPSYPHAKAKLRTLGYWKLHSASCLCH 1303
Query: 208 SFLTHLSGTEAAGTPAPAELRDPRPLPIR-----------WEAPNGSCVSLQQCFQKTTA 256
L A P RP+ + W + +Q+ ++ T
Sbjct: 1304 EIAKPLGEGWAVSKPLHLLRL*SRPVGLGGA**DDILLSVWVFTAALAIGMQRPCRRATG 1483
Query: 257 QEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRWEELC 316
+ + QP+ RL GG + CEG EV QR QW LCD A R R +LC
Sbjct: 1484 P--------LHAGSQPRAGRRLAGGPTPCEGHIEVFQRGQWHTLCDEQAHRVE-RGHQLC 1636
Query: 317 REQQCGDLISFHTVDADKTSPGFLCAQEKLSQCYHLQKKKHCNKRVFVTCQDP 369
RE +CGDL S + + G +C + L C ++ H R V C+ P
Sbjct: 1637 RELRCGDLSSSAELQEPRAG-GVICKERYLHLCPESPEEVHGCSRTHVVCKQP 1792
Score = 51.6 bits (122), Expect(2) = 2e-05
Identities = 42/110 (38%), Positives = 49/110 (44%), Gaps = 41/110 (37%)
Frame = +1
Query: 426 MSFHRSHTATVRSQVENPT-ASHVDNEYSQPPRNSHLSAYP------------------- 465
+SFHR+ T T R +VE A DN+Y+QPP+ S SAYP
Sbjct: 2578 VSFHRNSTVTPRVRVEEQQRARRGDNDYAQPPQKSP-SAYPGERTGSVHSVLPAGNGERG 2754
Query: 466 ---------------------ALEGALHRSSTQPDNSSDSDYDLQVAQRL 494
ALEGA R+S PDNSSDSDYDL A RL
Sbjct: 2755 AP*CGHRLVAPGKEPRVVRSTALEGAA-RASGAPDNSSDSDYDLHSAHRL 2901
Score = 41.6 bits (96), Expect = 0.18
Identities = 26/87 (29%), Positives = 38/87 (42%), Gaps = 5/87 (5%)
Frame = +1
Query: 36 LSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLALGPFP 95
LSG +C G +E+QM ++W VC W + +VC+QL C P L P
Sbjct: 310 LSGGGCRCAGLLEVQMSSRWSPVC---W--------DGVSPGSVCEQLGCRPPAKLSSAP 456
Query: 96 SLNRPQN--QVFCQG---SPWSISNCN 117
Q + C+G W +NC+
Sbjct: 457 PDLEEQQAWAMQCKGMERCQWKAANCS 537
Score = 38.5 bits (88), Expect = 1.5
Identities = 37/112 (33%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Frame = +2
Query: 159 LQLVPGHEGLRCTGVVEFY-NGSWGGTILYKAKDRPLGLGNLICKSLQCGSFLTHLSGTE 217
L+LV G+ C+G VE + G WG L + D L IC+ L C + SG
Sbjct: 869 LRLVDGN--FSCSGFVELHLRGRWGAVAL--SPDVWPELPARICRELGCNN----PSGVP 1024
Query: 218 AAGTPA-PAELRDPRPLPIRWEA-PNGSCVSLQQCFQKTTAQEGGQALTVIC 267
G P L LP+RWEA S L CF T+ G + +IC
Sbjct: 1025MGGPMGGPVSLPPQSRLPVRWEAVAPCSSPELLDCFNWTSHGHGKASAFLIC 1180
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +1
Query: 369 PNPAGLAPGTVASIIXXXXXXXXXXAMCGPLVY 401
P PAG APGTVASI +CGP Y
Sbjct: 1876 PPPAGTAPGTVASICLALLLLGVLLLICGPPAY 1974
Score = 22.7 bits (47), Expect(2) = 2e-05
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = +2
Query: 416 WIGPTGVNQN 425
WIGPTG++Q+
Sbjct: 2420 WIGPTGLHQS 2449
>emb|X99333.1|SSSRP2 S.scrofa mRNA for scavenger-receptor protein, 1316bp
Length = 1316
Score = 83.2 bits (204), Expect = 5e-14
Identities = 81/315 (25%), Positives = 111/315 (34%), Gaps = 25/315 (7%)
Frame = +3
Query: 33 QVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLALG 92
Q+ L S C G VEI + W TVC SW L H VC+QL CG L+
Sbjct: 309 QLRLVDGGSYCSGSVEILHQGSWGTVCDDSWDLDDAH--------VVCRQLGCGKTLSAL 464
Query: 93 PFPSLNRPQNQVF---------------CQGSPWSISNCNNTSSQDQCLPLSLICLEPQR 137
+++ C W NC + +IC E
Sbjct: 465 GSAHFGAGSGRIWLDDVNCTGKESHLWQCPSRGWGQHNCRHKEDA------GVICSES-- 620
Query: 138 XXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVE-FYNGSWGGTILYKAKDRPLGL 196
L L E C G +E FYNG+WGG +D L
Sbjct: 621 ---------------------LALRMVSEDQECAGWLEVFYNGTWGGVCRSPMEDITL-- 731
Query: 197 GNLICKSLQCGSFLTHLSGTEAAGTPAPA---ELRDPRPLPIRWEAPN-----GSCVSLQ 248
++IC+ L CG T S P ++ + WE P+ SC S +
Sbjct: 732 -SIICRQLGCGDSGTLNSSVSLREGSRPRWVDRIQCRKTDSSLWECPSDPWKYSSCSSKE 908
Query: 249 QCFQKTTAQEGGQALTVI-CSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAAR 307
+ + + T C+D K + RL GG SVC G EV W +CD S +
Sbjct: 909 EAYVSCAGRRPKSCPTTAPCTD---KEKLRLRGGDSVCSGRVEVWHGGSWGTVCDDSWSL 1079
Query: 308 GRGRWEELCREQQCG 322
E +C++ CG
Sbjct: 1080AEA--EVVCQQLGCG 1118
Score = 49.3 bits (116), Expect = 8e-04
Identities = 31/101 (30%), Positives = 42/101 (40%), Gaps = 15/101 (14%)
Frame = +3
Query: 33 QVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPL--- 89
++ L G +S C G+VE+ W TVC SW L+ +A VC+QL CG L
Sbjct: 981 KLRLRGGDSVCSGRVEVWHGGSWGTVCDDSWSLA--------EAEVVCQQLGCGHALEAL 1136
Query: 90 ---ALGP---------FPSLNRPQNQVFCQGSPWSISNCNN 118
A GP R + C PW S+C +
Sbjct: 1137 RDAAFGPGSGSIWLDEVQCRGRESSLWDCAAGPWGQSDCKH 1259
Score = 36.2 bits (82), Expect = 7.4
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +3
Query: 275 QSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRWE-----ELCREQQCGDLIS 326
Q RLV G S C G E+ + W +CD S W+ +CR+ CG +S
Sbjct: 309 QLRLVDGGSYCSGSVEILHQGSWGTVCDDS-------WDLDDAHVVCRQLGCGKTLS 458
>ref|NM_033330.1| Homo sapiens scavenger receptor cysteine-rich type 1 protein M160
precursor (M160), mRNA
Length = 4579
Score = 82.4 bits (202), Expect = 9e-14
Identities = 78/317 (24%), Positives = 121/317 (37%), Gaps = 21/317 (6%)
Frame = +2
Query: 36 LSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLALGPFP 95
L G +++C G++E+ + +W TVC W N++ A+ VC QL C +
Sbjct: 1778 LVGGSNRCSGRLEVYFQGRWGTVCDDGW--------NSKAAAVVCSQLDCPSSIIGMGLG 1933
Query: 96 SLNRPQNQVF-----CQGSPWSISNCNNTS-SQDQCL---PLSLICLEPQRXXXXXXXXX 146
+ + +++ C G + +C N+ + C + +IC +
Sbjct: 1934 NASTGYGKIWLDDVSCDGDESDLWSCRNSGWGNNDCSHSEDVGVICSD------------ 2077
Query: 147 XXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGSWGGTILYKAKDRPLGLGNLICKSLQC 206
L+LV G RC G VE G + A + + ++C+ L+C
Sbjct: 2078 -------ASDMELRLVGGSS--RCAGKVEV--NVQGAVGILCANGWGMNIAEVVCRQLEC 2224
Query: 207 GSFL------------THLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCFQKT 254
GS + H+ + + T A L D IRWE K
Sbjct: 2225 GSAIRVSREPHFTERTLHILMSNSGCTGGEASLWD----CIRWE-------------WKQ 2353
Query: 255 TAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRWEE 314
TA ++ICS + Q RLVG C G EV+ W ++CDS +
Sbjct: 2354 TACHLNMEASLICSAHR---QPRLVGADMPCSGRVEVKHADTWRSVCDSDFSLHAA--NV 2518
Query: 315 LCREQQCGDLISFHTVD 331
LCRE CGD IS D
Sbjct: 2519 LCRELNCGDAISLSVGD 2569
Score = 79.3 bits (194), Expect = 8e-13
Identities = 74/299 (24%), Positives = 122/299 (40%), Gaps = 16/299 (5%)
Frame = +2
Query: 22 LGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCK 81
+G + G ++ + L N+ C G+VE++ + +W T+C W N A+ VC+
Sbjct: 452 VGVNCYGEANLGLRLVDGNNSCSGRVEVKFQERWGTICDDGW--------NLNTAAVVCR 607
Query: 82 QLRCGDPL---ALGPFPSLNRP--QNQVFCQGSPWSISNC------NNTSSQDQCLPLSL 130
QL C + P++ RP + + CQG+ ++ NC N+ S ++ ++L
Sbjct: 608 QLGCPSSFISSGVVNSPAVLRPIWLDDILCQGNELALWNCRHRGWGNHDCSHNE--DVTL 781
Query: 131 ICLEPQRXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEF-YNGSWGGTILYKA 189
C + L+LV G RC G VE G WG +K
Sbjct: 782 TCYD-------------------SSDLELRLVGGTN--RCMGRVELKIQGRWGTVCHHKW 898
Query: 190 KDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPL----PIRWEAPNGSCV 245
+ +++CK L CG+ L H +G + + D W+ + V
Sbjct: 899 NN---AAADVVCKQLGCGTAL-HFAGLPHLQSGSDVVWLDGVSCSGNESFLWDCRHSGTV 1066
Query: 246 SLQQCFQKTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSS 304
+ Q ++VICSD ++ RL GS+ C G EVR QW +CD +
Sbjct: 1067NFDCLHQND--------VSVICSD-GADLELRLADGSNNCSGRVEVRIHEQWWTICDQN 1216
Score = 72.4 bits (176), Expect = 9e-11
Identities = 74/302 (24%), Positives = 124/302 (40%), Gaps = 7/302 (2%)
Frame = +2
Query: 31 DIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPL- 89
D+ + L G++S C G++E++ + +W TVC W + + A+ VCKQL CG P+
Sbjct: 1442 DLDLRLVGAHSPCYGRLEVKYQGEWGTVCHDRW--------STRNAAVVCKQLGCGKPMH 1597
Query: 90 --ALGPFPSLNRP--QNQVFCQGSPWSISNCNNTS-SQDQCLPLSLICLEPQRXXXXXXX 144
+ F + P + V C G+ +I +C ++ + C+ + +
Sbjct: 1598 VFGMTYFKEASGPIWLDDVSCIGNESNIWDCEHSGWGKHNCVHREDVIV----------- 1744
Query: 145 XXXXXXXXXXXXXRLQLVPGHEGLRCTGVVE-FYNGSWGGTILYKAKDRPLGLGNLICKS 203
L+LV G RC+G +E ++ G W GT+ + ++C
Sbjct: 1745 -----TCSGDATWGLRLVGGSN--RCSGRLEVYFQGRW-GTVCDDGWNSKAAA--VVCSQ 1894
Query: 204 LQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCFQKTTAQEGGQAL 263
L C S + + A+ L D + + S + + +
Sbjct: 1895 LDCPSSIIGMGLGNASTGYGKIWLDD-----VSCDGDESDLWSCRNSGWGNNDCSHSEDV 2059
Query: 264 TVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRWEELCREQQCGD 323
VICSD ++ RLVGGSS C G EV + LC + G E +CR+ +CG
Sbjct: 2060 GVICSD-ASDMELRLVGGSSRCAGKVEVNVQGAVGILC--ANGWGMNIAEVVCRQLECGS 2230
Query: 324 LI 325
I
Sbjct: 2231 AI 2236
Score = 70.5 bits (171), Expect = 4e-10
Identities = 91/373 (24%), Positives = 140/373 (37%), Gaps = 29/373 (7%)
Frame = +2
Query: 31 DIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLA 90
D+++ L G ++C G+VE++++ +W TVC W N A VCKQL CG L
Sbjct: 800 DLELRLVGGTNRCMGRVELKIQGRWGTVCHHKW--------NNAAADVVCKQLGCGTALH 955
Query: 91 LGPFPSLNRPQNQVF-----CQGSPWSISNCNNTSSQD-QCL---PLSLICLEPQRXXXX 141
P L + V+ C G+ + +C ++ + + CL +S+IC +
Sbjct: 956 FAGLPHLQSGSDVVWLDGVSCSGNESFLWDCRHSGTVNFDCLHQNDVSVICSD------- 1114
Query: 142 XXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGSWGGTILYKAKDRPLGLGNLIC 201
L+L G C+G VE TI + L ++C
Sbjct: 1115 ------------GADLELRLADGSNN--CSGRVEVRIHEQWWTICDQNWKNEQAL--VVC 1246
Query: 202 KSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCFQ----KTTAQ 257
K L C G+ + R + I + G+ +L C K T
Sbjct: 1247 KQLGCPF--------SVFGSRRAKPSNEARDIWINSISCTGNESALWDCTYDGKAKRTCF 1402
Query: 258 EGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRWEE--- 314
A VICSD + + RLVG S C G EV+ + +W +C RW
Sbjct: 1403 RRSDA-GVICSD-KADLDLRLVGAHSPCYGRLEVKYQGEWGTVC-------HDRWSTRNA 1555
Query: 315 --LCREQQCGDLISFHTVDADKTSPG--------FLCAQEKLSQCYHLQKKKH-CNKR-- 361
+C++ CG + + K + G + + + C H KH C R
Sbjct: 1556 AVVCKQLGCGKPMHVFGMTYFKEASGPIWLDDVSCIGNESNIWDCEHSGWGKHNCVHRED 1735
Query: 362 VFVTCQDPNPAGL 374
V VTC GL
Sbjct: 1736 VIVTCSGDATWGL 1774
Score = 65.1 bits (157), Expect = 1e-08
Identities = 72/323 (22%), Positives = 116/323 (35%), Gaps = 27/323 (8%)
Frame = +2
Query: 31 DIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCG---- 86
D ++ L +S+C G+VEI + W T+C W LS H VC++L CG
Sbjct: 3122 DKRLRLVDGDSRCAGRVEIYHDGFWGTICDDGWDLSDAH--------VVCQKLGCGVAFN 3277
Query: 87 -----------DPLALGPFPSLNRPQNQVFCQGSPWSISNCNNTSSQDQCLPLSLICLEP 135
P+ L + C W +C + +IC E
Sbjct: 3278 ATVSAHFGEGSGPIWLDDLNCTGMESHLWQCPSRGWGQHDCRHKEDA------GVICSE- 3436
Query: 136 QRXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVE-FYNGSWGGTILYKAKDRPL 194
L+L E C G +E FYNG+WG ++
Sbjct: 3437 --------------------FTALRLYSETETESCAGRLEVFYNGTWGSV---GRRNITT 3547
Query: 195 GLGNLICKSLQCGS----FLTHLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQC 250
+ ++C+ L CG L LS T +G +++ P+ + +S+ QC
Sbjct: 3548 AIAGIVCRQLGCGENGVVSLAPLSKT-GSGFMWVDDIQCPK-----------THISIWQC 3691
Query: 251 FQ-------KTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDS 303
+TA+E + C D + R+ GG + C G E+ W +CD
Sbjct: 3692 LSAPWERRISSTAEE----TWITCED-----RIRVRGGDTECSGRVEIWHAGSWGTVCDD 3844
Query: 304 SAARGRGRWEELCREQQCGDLIS 326
S E +C++ CG ++
Sbjct: 3845 SWDLAEA--EVVCQQLGCGSALA 3907
Score = 63.5 bits (153), Expect = 4e-08
Identities = 73/329 (22%), Positives = 125/329 (37%), Gaps = 22/329 (6%)
Frame = +2
Query: 21 CLGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVC 80
C S G D+++ L + C G VE++ + +W TVC W N ++ VC
Sbjct: 128 CFLISSFNGTDLELRLVNGDGPCSGTVEVKFQGQWGTVCDDGW--------NTTASTVVC 283
Query: 81 KQLRCGDPLALGPFPSLNRPQNQVF---------------CQGSPWSISNCNNTSSQDQC 125
KQL C A+ F +++ CQ W NC +
Sbjct: 284 KQLGCPFSFAMFRFGQAVTRHGKIWLDDVSCYGNESALWECQHREWGSHNCYHGED---- 451
Query: 126 LPLSLICLEPQRXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGSWGGTI 185
+ + C L+LV G+ C+G VE GTI
Sbjct: 452 --VGVNC-------------------YGEANLGLRLVDGNNS--CSGRVEVKFQERWGTI 562
Query: 186 LYKAKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCV 245
+ L ++C+ L C S S + +PA L RP+ + G+ +
Sbjct: 563 CDDGWN--LNTAAVVCRQLGCPS-----SFISSGVVNSPAVL---RPIWLDDILCQGNEL 712
Query: 246 SLQQCFQKTTAQEG---GQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALC- 301
+L C + + +T+ C D ++ RLVGG++ C G E++ + +W +C
Sbjct: 713 ALWNCRHRGWGNHDCSHNEDVTLTCYD-SSDLELRLVGGTNRCMGRVELKIQGRWGTVCH 889
Query: 302 ---DSSAARGRGRWEELCREQQCGDLISF 327
+++AA + +C++ CG + F
Sbjct: 890 HKWNNAAA------DVVCKQLGCGTALHF 958
Score = 61.6 bits (148), Expect = 2e-07
Identities = 70/314 (22%), Positives = 117/314 (36%), Gaps = 18/314 (5%)
Frame = +2
Query: 31 DIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLA 90
D+++ L G +S+C G+VE+ ++ +C++ W ++ A VC+QL CG +
Sbjct: 2084 DMELRLVGGSSRCAGKVEVNVQGAVGILCANGWGMNI--------AEVVCRQLECGSAIR 2239
Query: 91 LGPFPSLNRPQNQVF-----CQGSPWSISNCNNTS-SQDQC---LPLSLICLEPQRXXXX 141
+ P + C G S+ +C Q C + SLIC
Sbjct: 2240 VSREPHFTERTLHILMSNSGCTGGEASLWDCIRWEWKQTACHLNMEASLIC--------- 2392
Query: 142 XXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGSWGGTILYKAKDRPLGLGNLIC 201
R + G + + C+G VE + ++ D L N++C
Sbjct: 2393 -------------SAHRQPRLVGAD-MPCSGRVEVKHADTWRSVC--DSDFSLHAANVLC 2524
Query: 202 KSLQCGSFLTHLSG---------TEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCFQ 252
+ L CG ++ G T A PI + P +C+ ++
Sbjct: 2525 RELNCGDAISLSVGDHFGKGNGLTWAEKFQCEGSETHLALCPIV-QHPEDTCIHSRE--- 2692
Query: 253 KTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRW 312
+ V+CS + RLV G S C+G E+ W +LCD+ R
Sbjct: 2693 ----------VGVVCSRY---TDVRLVNGKSQCDGQVEINVLGHWGSLCDTHWDPEDAR- 2830
Query: 313 EELCREQQCGDLIS 326
LCR+ CG +S
Sbjct: 2831 -VLCRQLSCGTALS 2869
Score = 61.6 bits (148), Expect = 2e-07
Identities = 68/287 (23%), Positives = 112/287 (38%), Gaps = 13/287 (4%)
Frame = +2
Query: 29 GLDIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRC--- 85
G D+++ L+ ++ C G+VE+++ +W T+C +W+ +QA VCKQL C
Sbjct: 1115 GADLELRLADGSNNCSGRVEVRIHEQWWTICDQNWK--------NEQALVVCKQLGCPFS 1270
Query: 86 --GDPLALGPFPSLNRPQNQVFCQGSPWSISNCN-NTSSQDQCLPLS---LICLEPQRXX 139
G A + + N + C G+ ++ +C + ++ C S +IC +
Sbjct: 1271 VFGSRRAKPSNEARDIWINSISCTGNESALWDCTYDGKAKRTCFRRSDAGVICSD----- 1435
Query: 140 XXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEF-YNGSWGGTILYKAKDRPLGLGN 198
L+LV H C G +E Y G WG + R
Sbjct: 1436 --------------KADLDLRLVGAHS--PCYGRLEVKYQGEWGTVCHDRWSTRNAA--- 1558
Query: 199 LICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCFQKTTAQE 258
++CK L CG + T P L D + G+ ++ C +
Sbjct: 1559 VVCKQLGCGKPMHVFGMTYFKEASGPIWLDDVSCI--------GNESNIWDCEHSGWGKH 1714
Query: 259 G---GQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCD 302
+ + V CS RLVGGS+ C G EV + +W +CD
Sbjct: 1715 NCVHREDVIVTCSG-DATWGLRLVGGSNRCSGRLEVYFQGRWGTVCD 1852
Score = 59.3 bits (142), Expect = 8e-07
Identities = 85/370 (22%), Positives = 132/370 (34%), Gaps = 35/370 (9%)
Frame = +2
Query: 34 VMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLALGP 93
V L S+C GQVEI + W ++C + W + + A +C+QL CG L+
Sbjct: 2723 VRLVNGKSQCDGQVEINVLGHWGSLCDTHW--------DPEDARVLCRQLSCGTALSTTG 2878
Query: 94 FPSLNRPQNQVF-----CQGSPWSISNCNNTS-SQDQCL---PLSLICL----EP----- 135
+ +V+ C G+ + NC T C+ +S+IC +P
Sbjct: 2879 GKYIGERSVRVWGHRFHCLGNESLLDNCQMTVLGAPPCIHGNTVSVICTGSLTQPLFPCL 3058
Query: 136 -QRXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGSWGGTILYKAKDRPL 194
RL+LV G RC G VE Y+ + GTI D L
Sbjct: 3059 ANVSDPYLSAVPEGSALICLEDKRLRLVDGDS--RCAGRVEIYHDGFWGTICDDGWD--L 3226
Query: 195 GLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIR---WEAPNGSCVSLQQCF 251
+++C+ L CG P L D + W+ P+ C
Sbjct: 3227 SDAHVVCQKLGCGVAFNATVSAHFGEGSGPIWLDDLNCTGMESHLWQCPSRGW-GQHDCR 3403
Query: 252 QKTTAQEGGQALTVICSDFQPKVQSRLVGGSSV--CEGIAEVRQRSQWEALCDSSAARGR 309
K A VICS+F RL + C G EV W ++ +
Sbjct: 3404 HKEDA-------GVICSEF---TALRLYSETETESCAGRLEVFYNGTWGSVGRRNITTAI 3553
Query: 310 GRWEELCREQQCGDLISFHTVDADKTSPGFL------CAQEKLS--QCYHLQKKKHCN-- 359
+CR+ CG+ KT GF+ C + +S QC ++ +
Sbjct: 3554 A--GIVCRQLGCGENGVVSLAPLSKTGSGFMWVDDIQCPKTHISIWQCLSAPWERRISST 3727
Query: 360 -KRVFVTCQD 368
+ ++TC+D
Sbjct: 3728 AEETWITCED 3757
Score = 50.1 bits (118), Expect = 5e-04
Identities = 28/101 (27%), Positives = 43/101 (41%), Gaps = 15/101 (14%)
Frame = +2
Query: 33 QVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLALG 92
++ + G +++C G+VEI W TVC SW L+ +A VC+QL CG LA
Sbjct: 3758 RIRVRGGDTECSGRVEIWHAGSWGTVCDDSWDLA--------EAEVVCQQLGCGSALAAL 3913
Query: 93 PFPSLNRPQNQVF---------------CQGSPWSISNCNN 118
S + ++ C PW S+C +
Sbjct: 3914 RDASFGQGTGTIWLDDMRCKGNESFLWDCHAKPWGQSDCGH 4036
Score = 46.6 bits (109), Expect = 0.005
Identities = 68/310 (21%), Positives = 113/310 (35%), Gaps = 40/310 (12%)
Frame = +2
Query: 33 QVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLALG 92
Q L G++ C G+VE++ + W++VC S + L A+ +C++L CGD ++L
Sbjct: 2405 QPRLVGADMPCSGRVEVKHADTWRSVCDSDFSL--------HAANVLCRELNCGDAISLS 2560
Query: 93 PFPSLNRPQNQVF-----CQGSPWSISNCNNTS-SQDQCL---PLSLICLEPQRXXXXXX 143
+ + C+GS ++ C +D C+ + ++C
Sbjct: 2561 VGDHFGKGNGLTWAEKFQCEGSETHLALCPIVQHPEDTCIHSREVGVVC----------- 2707
Query: 144 XXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEF-YNGSWGG--TILYKAKDRPLGLGNLI 200
++LV G +C G VE G WG + +D ++
Sbjct: 2708 ----------SRYTDVRLVNGKS--QCDGQVEINVLGHWGSLCDTHWDPED-----ARVL 2836
Query: 201 CKSLQCGSFLTHLSGTEAAGTPAPA-----------ELRDPRPLPIRWEAP--NGSCVS- 246
C+ L CG+ L+ G L D + + P +G+ VS
Sbjct: 2837 CRQLSCGTALSTTGGKYIGERSVRVWGHRFHCLGNESLLDNCQMTVLGAPPCIHGNTVSV 3016
Query: 247 ---------LQQCFQKT-----TAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVR 292
L C +A G AL IC + + + RLV G S C G E+
Sbjct: 3017 ICTGSLTQPLFPCLANVSDPYLSAVPEGSAL--ICLEDK---RLRLVDGDSRCAGRVEIY 3181
Query: 293 QRSQWEALCD 302
W +CD
Sbjct: 3182 HDGFWGTICD 3211
>gb|AF264014.1|AF264014 Homo sapiens scavenger receptor cysteine-rich type 1 protein M160
precursor, mRNA, complete cds, alternatively spliced
Length = 4579
Score = 82.4 bits (202), Expect = 9e-14
Identities = 78/317 (24%), Positives = 121/317 (37%), Gaps = 21/317 (6%)
Frame = +2
Query: 36 LSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLALGPFP 95
L G +++C G++E+ + +W TVC W N++ A+ VC QL C +
Sbjct: 1778 LVGGSNRCSGRLEVYFQGRWGTVCDDGW--------NSKAAAVVCSQLDCPSSIIGMGLG 1933
Query: 96 SLNRPQNQVF-----CQGSPWSISNCNNTS-SQDQCL---PLSLICLEPQRXXXXXXXXX 146
+ + +++ C G + +C N+ + C + +IC +
Sbjct: 1934 NASTGYGKIWLDDVSCDGDESDLWSCRNSGWGNNDCSHSEDVGVICSD------------ 2077
Query: 147 XXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGSWGGTILYKAKDRPLGLGNLICKSLQC 206
L+LV G RC G VE G + A + + ++C+ L+C
Sbjct: 2078 -------ASDMELRLVGGSS--RCAGKVEV--NVQGAVGILCANGWGMNIAEVVCRQLEC 2224
Query: 207 GSFL------------THLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCFQKT 254
GS + H+ + + T A L D IRWE K
Sbjct: 2225 GSAIRVSREPHFTERTLHILMSNSGCTGGEASLWD----CIRWE-------------WKQ 2353
Query: 255 TAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRWEE 314
TA ++ICS + Q RLVG C G EV+ W ++CDS +
Sbjct: 2354 TACHLNMEASLICSAHR---QPRLVGADMPCSGRVEVKHADTWRSVCDSDFSLHAA--NV 2518
Query: 315 LCREQQCGDLISFHTVD 331
LCRE CGD IS D
Sbjct: 2519 LCRELNCGDAISLSVGD 2569
Score = 79.3 bits (194), Expect = 8e-13
Identities = 74/299 (24%), Positives = 122/299 (40%), Gaps = 16/299 (5%)
Frame = +2
Query: 22 LGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCK 81
+G + G ++ + L N+ C G+VE++ + +W T+C W N A+ VC+
Sbjct: 452 VGVNCYGEANLGLRLVDGNNSCSGRVEVKFQERWGTICDDGW--------NLNTAAVVCR 607
Query: 82 QLRCGDPL---ALGPFPSLNRP--QNQVFCQGSPWSISNC------NNTSSQDQCLPLSL 130
QL C + P++ RP + + CQG+ ++ NC N+ S ++ ++L
Sbjct: 608 QLGCPSSFISSGVVNSPAVLRPIWLDDILCQGNELALWNCRHRGWGNHDCSHNE--DVTL 781
Query: 131 ICLEPQRXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEF-YNGSWGGTILYKA 189
C + L+LV G RC G VE G WG +K
Sbjct: 782 TCYD-------------------SSDLELRLVGGTN--RCMGRVELKIQGRWGTVCHHKW 898
Query: 190 KDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPL----PIRWEAPNGSCV 245
+ +++CK L CG+ L H +G + + D W+ + V
Sbjct: 899 NN---AAADVVCKQLGCGTAL-HFAGLPHLQSGSDVVWLDGVSCSGNESFLWDCRHSGTV 1066
Query: 246 SLQQCFQKTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSS 304
+ Q ++VICSD ++ RL GS+ C G EVR QW +CD +
Sbjct: 1067NFDCLHQND--------VSVICSD-GADLELRLADGSNNCSGRVEVRIHEQWWTICDQN 1216
Score = 72.4 bits (176), Expect = 9e-11
Identities = 74/302 (24%), Positives = 124/302 (40%), Gaps = 7/302 (2%)
Frame = +2
Query: 31 DIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPL- 89
D+ + L G++S C G++E++ + +W TVC W + + A+ VCKQL CG P+
Sbjct: 1442 DLDLRLVGAHSPCYGRLEVKYQGEWGTVCHDRW--------STRNAAVVCKQLGCGKPMH 1597
Query: 90 --ALGPFPSLNRP--QNQVFCQGSPWSISNCNNTS-SQDQCLPLSLICLEPQRXXXXXXX 144
+ F + P + V C G+ +I +C ++ + C+ + +
Sbjct: 1598 VFGMTYFKEASGPIWLDDVSCIGNESNIWDCEHSGWGKHNCVHREDVIV----------- 1744
Query: 145 XXXXXXXXXXXXXRLQLVPGHEGLRCTGVVE-FYNGSWGGTILYKAKDRPLGLGNLICKS 203
L+LV G RC+G +E ++ G W GT+ + ++C
Sbjct: 1745 -----TCSGDATWGLRLVGGSN--RCSGRLEVYFQGRW-GTVCDDGWNSKAAA--VVCSQ 1894
Query: 204 LQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCFQKTTAQEGGQAL 263
L C S + + A+ L D + + S + + +
Sbjct: 1895 LDCPSSIIGMGLGNASTGYGKIWLDD-----VSCDGDESDLWSCRNSGWGNNDCSHSEDV 2059
Query: 264 TVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRWEELCREQQCGD 323
VICSD ++ RLVGGSS C G EV + LC + G E +CR+ +CG
Sbjct: 2060 GVICSD-ASDMELRLVGGSSRCAGKVEVNVQGAVGILC--ANGWGMNIAEVVCRQLECGS 2230
Query: 324 LI 325
I
Sbjct: 2231 AI 2236
Score = 70.5 bits (171), Expect = 4e-10
Identities = 91/373 (24%), Positives = 140/373 (37%), Gaps = 29/373 (7%)
Frame = +2
Query: 31 DIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLA 90
D+++ L G ++C G+VE++++ +W TVC W N A VCKQL CG L
Sbjct: 800 DLELRLVGGTNRCMGRVELKIQGRWGTVCHHKW--------NNAAADVVCKQLGCGTALH 955
Query: 91 LGPFPSLNRPQNQVF-----CQGSPWSISNCNNTSSQD-QCL---PLSLICLEPQRXXXX 141
P L + V+ C G+ + +C ++ + + CL +S+IC +
Sbjct: 956 FAGLPHLQSGSDVVWLDGVSCSGNESFLWDCRHSGTVNFDCLHQNDVSVICSD------- 1114
Query: 142 XXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGSWGGTILYKAKDRPLGLGNLIC 201
L+L G C+G VE TI + L ++C
Sbjct: 1115 ------------GADLELRLADGSNN--CSGRVEVRIHEQWWTICDQNWKNEQAL--VVC 1246
Query: 202 KSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCFQ----KTTAQ 257
K L C G+ + R + I + G+ +L C K T
Sbjct: 1247 KQLGCPF--------SVFGSRRAKPSNEARDIWINSISCTGNESALWDCTYDGKAKRTCF 1402
Query: 258 EGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRWEE--- 314
A VICSD + + RLVG S C G EV+ + +W +C RW
Sbjct: 1403 RRSDA-GVICSD-KADLDLRLVGAHSPCYGRLEVKYQGEWGTVC-------HDRWSTRNA 1555
Query: 315 --LCREQQCGDLISFHTVDADKTSPG--------FLCAQEKLSQCYHLQKKKH-CNKR-- 361
+C++ CG + + K + G + + + C H KH C R
Sbjct: 1556 AVVCKQLGCGKPMHVFGMTYFKEASGPIWLDDVSCIGNESNIWDCEHSGWGKHNCVHRED 1735
Query: 362 VFVTCQDPNPAGL 374
V VTC GL
Sbjct: 1736 VIVTCSGDATWGL 1774
Score = 65.1 bits (157), Expect = 1e-08
Identities = 72/323 (22%), Positives = 116/323 (35%), Gaps = 27/323 (8%)
Frame = +2
Query: 31 DIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCG---- 86
D ++ L +S+C G+VEI + W T+C W LS H VC++L CG
Sbjct: 3122 DKRLRLVDGDSRCAGRVEIYHDGFWGTICDDGWDLSDAH--------VVCQKLGCGVAFN 3277
Query: 87 -----------DPLALGPFPSLNRPQNQVFCQGSPWSISNCNNTSSQDQCLPLSLICLEP 135
P+ L + C W +C + +IC E
Sbjct: 3278 ATVSAHFGEGSGPIWLDDLNCTGMESHLWQCPSRGWGQHDCRHKEDA------GVICSE- 3436
Query: 136 QRXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVE-FYNGSWGGTILYKAKDRPL 194
L+L E C G +E FYNG+WG ++
Sbjct: 3437 --------------------FTALRLYSETETESCAGRLEVFYNGTWGSV---GRRNITT 3547
Query: 195 GLGNLICKSLQCGS----FLTHLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQC 250
+ ++C+ L CG L LS T +G +++ P+ + +S+ QC
Sbjct: 3548 AIAGIVCRQLGCGENGVVSLAPLSKT-GSGFMWVDDIQCPK-----------THISIWQC 3691
Query: 251 FQ-------KTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDS 303
+TA+E + C D + R+ GG + C G E+ W +CD
Sbjct: 3692 LSAPWERRISSTAEE----TWITCED-----RIRVRGGDTECSGRVEIWHAGSWGTVCDD 3844
Query: 304 SAARGRGRWEELCREQQCGDLIS 326
S E +C++ CG ++
Sbjct: 3845 SWDLAEA--EVVCQQLGCGSALA 3907
Score = 63.5 bits (153), Expect = 4e-08
Identities = 73/329 (22%), Positives = 125/329 (37%), Gaps = 22/329 (6%)
Frame = +2
Query: 21 CLGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVC 80
C S G D+++ L + C G VE++ + +W TVC W N ++ VC
Sbjct: 128 CFLISSFNGTDLELRLVNGDGPCSGTVEVKFQGQWGTVCDDGW--------NTTASTVVC 283
Query: 81 KQLRCGDPLALGPFPSLNRPQNQVF---------------CQGSPWSISNCNNTSSQDQC 125
KQL C A+ F +++ CQ W NC +
Sbjct: 284 KQLGCPFSFAMFRFGQAVTRHGKIWLDDVSCYGNESALWECQHREWGSHNCYHGED---- 451
Query: 126 LPLSLICLEPQRXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGSWGGTI 185
+ + C L+LV G+ C+G VE GTI
Sbjct: 452 --VGVNC-------------------YGEANLGLRLVDGNNS--CSGRVEVKFQERWGTI 562
Query: 186 LYKAKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCV 245
+ L ++C+ L C S S + +PA L RP+ + G+ +
Sbjct: 563 CDDGWN--LNTAAVVCRQLGCPS-----SFISSGVVNSPAVL---RPIWLDDILCQGNEL 712
Query: 246 SLQQCFQKTTAQEG---GQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALC- 301
+L C + + +T+ C D ++ RLVGG++ C G E++ + +W +C
Sbjct: 713 ALWNCRHRGWGNHDCSHNEDVTLTCYD-SSDLELRLVGGTNRCMGRVELKIQGRWGTVCH 889
Query: 302 ---DSSAARGRGRWEELCREQQCGDLISF 327
+++AA + +C++ CG + F
Sbjct: 890 HKWNNAAA------DVVCKQLGCGTALHF 958
Score = 61.6 bits (148), Expect = 2e-07
Identities = 70/314 (22%), Positives = 117/314 (36%), Gaps = 18/314 (5%)
Frame = +2
Query: 31 DIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLA 90
D+++ L G +S+C G+VE+ ++ +C++ W ++ A VC+QL CG +
Sbjct: 2084 DMELRLVGGSSRCAGKVEVNVQGAVGILCANGWGMNI--------AEVVCRQLECGSAIR 2239
Query: 91 LGPFPSLNRPQNQVF-----CQGSPWSISNCNNTS-SQDQC---LPLSLICLEPQRXXXX 141
+ P + C G S+ +C Q C + SLIC
Sbjct: 2240 VSREPHFTERTLHILMSNSGCTGGEASLWDCIRWEWKQTACHLNMEASLIC--------- 2392
Query: 142 XXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGSWGGTILYKAKDRPLGLGNLIC 201
R + G + + C+G VE + ++ D L N++C
Sbjct: 2393 -------------SAHRQPRLVGAD-MPCSGRVEVKHADTWRSVC--DSDFSLHAANVLC 2524
Query: 202 KSLQCGSFLTHLSG---------TEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCFQ 252
+ L CG ++ G T A PI + P +C+ ++
Sbjct: 2525 RELNCGDAISLSVGDHFGKGNGLTWAEKFQCEGSETHLALCPIV-QHPEDTCIHSRE--- 2692
Query: 253 KTTAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRW 312
+ V+CS + RLV G S C+G E+ W +LCD+ R
Sbjct: 2693 ----------VGVVCSRY---TDVRLVNGKSQCDGQVEINVLGHWGSLCDTHWDPEDAR- 2830
Query: 313 EELCREQQCGDLIS 326
LCR+ CG +S
Sbjct: 2831 -VLCRQLSCGTALS 2869
Score = 61.6 bits (148), Expect = 2e-07
Identities = 68/287 (23%), Positives = 112/287 (38%), Gaps = 13/287 (4%)
Frame = +2
Query: 29 GLDIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRC--- 85
G D+++ L+ ++ C G+VE+++ +W T+C +W+ +QA VCKQL C
Sbjct: 1115 GADLELRLADGSNNCSGRVEVRIHEQWWTICDQNWK--------NEQALVVCKQLGCPFS 1270
Query: 86 --GDPLALGPFPSLNRPQNQVFCQGSPWSISNCN-NTSSQDQCLPLS---LICLEPQRXX 139
G A + + N + C G+ ++ +C + ++ C S +IC +
Sbjct: 1271 VFGSRRAKPSNEARDIWINSISCTGNESALWDCTYDGKAKRTCFRRSDAGVICSD----- 1435
Query: 140 XXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEF-YNGSWGGTILYKAKDRPLGLGN 198
L+LV H C G +E Y G WG + R
Sbjct: 1436 --------------KADLDLRLVGAHS--PCYGRLEVKYQGEWGTVCHDRWSTRNAA--- 1558
Query: 199 LICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCFQKTTAQE 258
++CK L CG + T P L D + G+ ++ C +
Sbjct: 1559 VVCKQLGCGKPMHVFGMTYFKEASGPIWLDDVSCI--------GNESNIWDCEHSGWGKH 1714
Query: 259 G---GQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCD 302
+ + V CS RLVGGS+ C G EV + +W +CD
Sbjct: 1715 NCVHREDVIVTCSG-DATWGLRLVGGSNRCSGRLEVYFQGRWGTVCD 1852
Score = 59.3 bits (142), Expect = 8e-07
Identities = 85/370 (22%), Positives = 132/370 (34%), Gaps = 35/370 (9%)
Frame = +2
Query: 34 VMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLALGP 93
V L S+C GQVEI + W ++C + W + + A +C+QL CG L+
Sbjct: 2723 VRLVNGKSQCDGQVEINVLGHWGSLCDTHW--------DPEDARVLCRQLSCGTALSTTG 2878
Query: 94 FPSLNRPQNQVF-----CQGSPWSISNCNNTS-SQDQCL---PLSLICL----EP----- 135
+ +V+ C G+ + NC T C+ +S+IC +P
Sbjct: 2879 GKYIGERSVRVWGHRFHCLGNESLLDNCQMTVLGAPPCIHGNTVSVICTGSLTQPLFPCL 3058
Query: 136 -QRXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGSWGGTILYKAKDRPL 194
RL+LV G RC G VE Y+ + GTI D L
Sbjct: 3059 ANVSDPYLSAVPEGSALICLEDKRLRLVDGDS--RCAGRVEIYHDGFWGTICDDGWD--L 3226
Query: 195 GLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIR---WEAPNGSCVSLQQCF 251
+++C+ L CG P L D + W+ P+ C
Sbjct: 3227 SDAHVVCQKLGCGVAFNATVSAHFGEGSGPIWLDDLNCTGMESHLWQCPSRGW-GQHDCR 3403
Query: 252 QKTTAQEGGQALTVICSDFQPKVQSRLVGGSSV--CEGIAEVRQRSQWEALCDSSAARGR 309
K A VICS+F RL + C G EV W ++ +
Sbjct: 3404 HKEDA-------GVICSEF---TALRLYSETETESCAGRLEVFYNGTWGSVGRRNITTAI 3553
Query: 310 GRWEELCREQQCGDLISFHTVDADKTSPGFL------CAQEKLS--QCYHLQKKKHCN-- 359
+CR+ CG+ KT GF+ C + +S QC ++ +
Sbjct: 3554 A--GIVCRQLGCGENGVVSLAPLSKTGSGFMWVDDIQCPKTHISIWQCLSAPWERRISST 3727
Query: 360 -KRVFVTCQD 368
+ ++TC+D
Sbjct: 3728 AEETWITCED 3757
Score = 50.1 bits (118), Expect = 5e-04
Identities = 28/101 (27%), Positives = 43/101 (41%), Gaps = 15/101 (14%)
Frame = +2
Query: 33 QVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLALG 92
++ + G +++C G+VEI W TVC SW L+ +A VC+QL CG LA
Sbjct: 3758 RIRVRGGDTECSGRVEIWHAGSWGTVCDDSWDLA--------EAEVVCQQLGCGSALAAL 3913
Query: 93 PFPSLNRPQNQVF---------------CQGSPWSISNCNN 118
S + ++ C PW S+C +
Sbjct: 3914 RDASFGQGTGTIWLDDMRCKGNESFLWDCHAKPWGQSDCGH 4036
Score = 46.6 bits (109), Expect = 0.005
Identities = 68/310 (21%), Positives = 113/310 (35%), Gaps = 40/310 (12%)
Frame = +2
Query: 33 QVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLALG 92
Q L G++ C G+VE++ + W++VC S + L A+ +C++L CGD ++L
Sbjct: 2405 QPRLVGADMPCSGRVEVKHADTWRSVCDSDFSL--------HAANVLCRELNCGDAISLS 2560
Query: 93 PFPSLNRPQNQVF-----CQGSPWSISNCNNTS-SQDQCL---PLSLICLEPQRXXXXXX 143
+ + C+GS ++ C +D C+ + ++C
Sbjct: 2561 VGDHFGKGNGLTWAEKFQCEGSETHLALCPIVQHPEDTCIHSREVGVVC----------- 2707
Query: 144 XXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEF-YNGSWGG--TILYKAKDRPLGLGNLI 200
++LV G +C G VE G WG + +D ++
Sbjct: 2708 ----------SRYTDVRLVNGKS--QCDGQVEINVLGHWGSLCDTHWDPED-----ARVL 2836
Query: 201 CKSLQCGSFLTHLSGTEAAGTPAPA-----------ELRDPRPLPIRWEAP--NGSCVS- 246
C+ L CG+ L+ G L D + + P +G+ VS
Sbjct: 2837 CRQLSCGTALSTTGGKYIGERSVRVWGHRFHCLGNESLLDNCQMTVLGAPPCIHGNTVSV 3016
Query: 247 ---------LQQCFQKT-----TAQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVR 292
L C +A G AL IC + + + RLV G S C G E+
Sbjct: 3017 ICTGSLTQPLFPCLANVSDPYLSAVPEGSAL--ICLEDK---RLRLVDGDSRCAGRVEIY 3181
Query: 293 QRSQWEALCD 302
W +CD
Sbjct: 3182 HDGFWGTICD 3211
>emb|X99336.1|SSSRP5 S.scrofa mRNA for scavenger-receptor protein, 2423bp
Length = 2423
Score = 82.0 bits (201), Expect = 1e-13
Identities = 81/316 (25%), Positives = 125/316 (38%), Gaps = 24/316 (7%)
Frame = +3
Query: 31 DIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLA 90
++++M +G+ S+C G+VE+ + W+T+C+S W ++ A+ VC QL CG L+
Sbjct: 711 EVRLMRNGT-SQCAGRVEMNISGGWRTLCASHWTMAN--------ANVVCHQLGCGVALS 863
Query: 91 L--GPFPSLNRPQNQVFCQGSPWSISNCNNTS-SQDQCL---PLSLICLEPQR------- 137
G + + C G+ + NC T+ C S+IC Q
Sbjct: 864 TPKGAEGGDQMWKARFHCSGAESFLWNCPVTALGVPDCAHGNTASVICSGNQTQVLPQCN 1043
Query: 138 -XXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVE-FYNGSWGGTILYKAKDRPLG 195
L L E C G +E FYNG+WGG +D L
Sbjct: 1044 DSLSEPAGSAASEESTTNCSESLALRMVSEDQECAGWLEVFYNGTWGGVCRSPMEDITL- 1220
Query: 196 LGNLICKSLQCGSFLTHLSGTEAAGTPAPA---ELRDPRPLPIRWEAP-----NGSCVSL 247
++IC+ L CG T S P ++ + W+ P N SC
Sbjct: 1221 --SMICRQLGCGDSGTLNSSVSLREGSRPRWVDGIQCGKTDTSFWQCPSDPWKNSSCSLT 1394
Query: 248 QQCFQKTTAQEGGQALTVI-CSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAA 306
++ + + T C+D K + RL GG SVC G EV W +CD S +
Sbjct: 1395 EEAYVSCAGRRPKSCPTAAPCTD---KEKLRLRGGDSVCSGRVEVWHSGSWGTVCDDSWS 1565
Query: 307 RGRGRWEELCREQQCG 322
E +C++ CG
Sbjct: 1566 LAEA--EVVCQQLGCG 1607
Score = 64.7 bits (156), Expect = 2e-08
Identities = 76/313 (24%), Positives = 113/313 (35%), Gaps = 14/313 (4%)
Frame = +3
Query: 28 GGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGD 87
GG +++ L +C+G+VE++ + KW TV + W L +A+ VC+QL CG
Sbjct: 66 GGQALELRLKDGRHRCEGRVELKHQGKWGTVNRAYWGL--------PRATVVCRQLECG- 218
Query: 88 PLALGPFPSLNRPQNQVFCQGSP--WSISNCNNTSSQDQCLPLSLICLEPQRXXXXXXXX 145
+++ P F +G W + C T S C P
Sbjct: 219 -------TAVDAPVASYFGRGDGPIWLYAFCEGTES------TLTDCRHPNITDYRTKGF 359
Query: 146 XXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNG-SWGGTILYKAKDRPLGLGN------ 198
++LV G C+G VE ++G W P+ GN
Sbjct: 360 SHDWDAGAVCSGFVRLVVGDR--PCSGRVEVHSGEDW----------TPVSDGNFTFPTA 503
Query: 199 -LICKSLQCGSFLTHLSG---TEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCFQKT 254
+IC L CG ++ L E P E R P W P C
Sbjct: 504 HVICAELGCGKAVSVLGQRPLREPGNQVWPEEFRCKGDEPELWSCPRVPCPG-------G 662
Query: 255 TAQEGGQALTVICSDFQPKVQSRLV-GGSSVCEGIAEVRQRSQWEALCDSSAARGRGRWE 313
T G A+ V+CS + + RL+ G+S C G E+ W LC S
Sbjct: 663 TCHHSG-AVQVVCSAYS---EVRLMRNGTSQCAGRVEMNISGGWRTLCASHWTMANA--N 824
Query: 314 ELCREQQCGDLIS 326
+C + CG +S
Sbjct: 825 VVCHQLGCGVALS 863
Score = 50.1 bits (118), Expect = 5e-04
Identities = 31/101 (30%), Positives = 42/101 (40%), Gaps = 15/101 (14%)
Frame = +3
Query: 33 QVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPL--- 89
++ L G +S C G+VE+ W TVC SW L+ +A VC+QL CG L
Sbjct: 1470 KLRLRGGDSVCSGRVEVWHSGSWGTVCDDSWSLA--------EAEVVCQQLGCGHALEAL 1625
Query: 90 ---ALGP---------FPSLNRPQNQVFCQGSPWSISNCNN 118
A GP R + C PW S+C +
Sbjct: 1626 RDAAFGPGNGSIWLDEVQCRGRESSLWDCAAGPWGQSDCKH 1748
>gb|AF043112.1|AF043112 Oryctolagus cuniculus hensin mRNA, complete cds
Length = 5108
Score = 80.5 bits (197), Expect = 3e-13
Identities = 75/319 (23%), Positives = 123/319 (38%), Gaps = 24/319 (7%)
Frame = +1
Query: 32 IQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLAL 91
+++ L+ + +CQG+VE+ + W TVC W ++ A VC+QL CG ++
Sbjct: 1738 LELRLANGSDRCQGRVEVLYQGSWGTVCDDGWDIND--------AQVVCRQLGCGTAVSA 1893
Query: 92 GPFPSLNRPQNQVF---------------CQGSPWSISNCNNTSSQDQCLPLSLICLEPQ 136
+ Q+ C W NC + ++ P
Sbjct: 1894 PGSARFGQGPGQIVLDDVSCSGQEPYLWSCHHRGWLSHNCGHQEDAGVICSGAMDTTTPL 2073
Query: 137 RXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVE-FYNGSWGGTILYKAKDRPLG 195
+L+LV G + RC G VE Y GSWG T+ + D L
Sbjct: 2074 PDTWPTTVIYESTPVHISGL-QLRLVNGSD--RCEGRVEVLYQGSWG-TVCDDSWD--LN 2235
Query: 196 LGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCFQKTT 255
+++C+ L CG+ L+ + + + L D + +GS +L C +
Sbjct: 2236 DASVVCRQLGCGTALSAPASAQFGQSSGSIVLDDV--------SCSGSEPNLWSCSHRGW 2391
Query: 256 AQEG---GQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRW 312
+ V+CS ++ RLV GS+ C+G EV R W +CD S W
Sbjct: 2392 LSHNCGHHEDAGVVCSGPDSRLAVRLVNGSTRCQGRVEVLYRGSWGTVCDDS-------W 2550
Query: 313 E-----ELCREQQCGDLIS 326
+ +CR+ CG +S
Sbjct: 2551 DINDASVVCRQLGCGWAVS 2607
Score = 63.2 bits (152), Expect = 6e-08
Identities = 73/344 (21%), Positives = 112/344 (32%), Gaps = 49/344 (14%)
Frame = +1
Query: 32 IQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLAL 91
+++ L+ +CQG+VE+ + W TVC W ++ A VC+QL CG ++
Sbjct: 151 LELRLANGGDRCQGRVEVLYQGSWGTVCDDGWDIN--------DAQVVCRQLGCGMAVSA 306
Query: 92 GPFPSLNRPQNQVF---------------CQGSPWSISNCNNTSSQDQCLPLSLICLEPQ 136
+ Q+ C W NC + ++ P
Sbjct: 307 PGSARFGQGPGQIVLDDVSCSGQEPYLWSCHHRGWLSHNCGHQEDAGVICSDAMAMTSPP 486
Query: 137 RXXXXXXXXXXXX-------XXXXXXXXRLQLVPGHEGLRCTGVVE-FYNGSWGGTILYK 188
L+L G + RC G VE Y GSW GT+
Sbjct: 487 PDTWPTTVIYESTPHFPSGLELVFPSGLELRLANGSD--RCQGRVEVLYQGSW-GTVCDD 657
Query: 189 AKDRPLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRD---PRPLPIRWEAPNGSCV 245
D + ++C+ L CG ++ P L D P W + +
Sbjct: 658 GWD--INDAQVVCRQLGCGMAVSAPGSARFGQGPGQIVLDDVSCSGQEPYLWSCHHRGWL 831
Query: 246 SLQQCFQKTTAQEGGQALTVICSD-----------------------FQPKVQSRLVGGS 282
S C + A VICSD F ++ RL GS
Sbjct: 832 S-HNCGHQEDA-------GVICSDAVPTTTPPPDTWPTTVIYESSPVFPSGLELRLANGS 987
Query: 283 SVCEGIAEVRQRSQWEALCDSSAARGRGRWEELCREQQCGDLIS 326
C+G EV + W +CD + +CR+ CG +S
Sbjct: 988 DRCQGRVEVLYQGSWGTVCDDGWDINDA--QVVCRQLGCGTAVS 1113
Score = 61.6 bits (148), Expect = 2e-07
Identities = 78/338 (23%), Positives = 116/338 (34%), Gaps = 40/338 (11%)
Frame = +1
Query: 29 GLDIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDP 88
GL++Q L+ + +CQG+VE+ + TVC W ++ A VC+QL CG
Sbjct: 1351 GLELQ--LANGSDRCQGRVEVLYQG---TVCDDGWDIND--------AQVVCRQLGCGMA 1491
Query: 89 LALGPFPSLNRPQNQVF---------------CQGSPWSISNCNNTSSQDQCLPLSLICL 133
++ + Q+ C W NC + ++
Sbjct: 1492 VSAPGSARFGQGPGQIVLDDVSCSGQEPYLWSCHHRGWLSHNCGHQEDAGVICSDAMAMT 1671
Query: 134 EPQRXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVE-FYNGSWGGTILYKAKDR 192
P L+L G + RC G VE Y GSW GT+ D
Sbjct: 1672 TPP-PDTWPTTVIYESTPHFPSGLELRLANGSD--RCQGRVEVLYQGSW-GTVCDDGWD- 1836
Query: 193 PLGLGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRD---PRPLPIRWEAPNGSCVSLQQ 249
+ ++C+ L CG+ ++ P L D P W + +S
Sbjct: 1837 -INDAQVVCRQLGCGTAVSAPGSARFGQGPGQIVLDDVSCSGQEPYLWSCHHRGWLS-HN 2010
Query: 250 CFQKTTAQ---EGGQALTVICSDFQPK-------------VQSRLVGGSSVCEGIAEVRQ 293
C + A G T D P +Q RLV GS CEG EV
Sbjct: 2011 CGHQEDAGVICSGAMDTTTPLPDTWPTTVIYESTPVHISGLQLRLVNGSDRCEGRVEVLY 2190
Query: 294 RSQWEALCDSSAARGRGRWE-----ELCREQQCGDLIS 326
+ W +CD S W+ +CR+ CG +S
Sbjct: 2191 QGSWGTVCDDS-------WDLNDASVVCRQLGCGTALS 2283
Score = 60.1 bits (144), Expect = 5e-07
Identities = 68/328 (20%), Positives = 107/328 (31%), Gaps = 33/328 (10%)
Frame = +1
Query: 32 IQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLAL 91
+++ L+ + +CQG+VE+ + W TVC W ++ A VC+QL CG ++
Sbjct: 961 LELRLANGSDRCQGRVEVLYQGSWGTVCDDGWDIN--------DAQVVCRQLGCGTAVSA 1116
Query: 92 GPFPSLNRPQNQVF---------------CQGSPWSISNCNNTSSQDQCLPLSLICLEPQ 136
+ Q+ C W NC + ++ P
Sbjct: 1117 PGSARFGQGPGQIVLDDVSCSGQEPYLWSCHHRGWLSHNCGHQEDAGVICSDAMAMTTP- 1293
Query: 137 RXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGSWGGTILYKAKDRPLGL 196
LQL G + RC G VE + GT+ D +
Sbjct: 1294 LPDTWPTTVIHESTPVFPSGLELQLANGSD--RCQGRVEVL---YQGTVCDDGWD--IND 1452
Query: 197 GNLICKSLQCGSFLTHLSGTEAAGTPAPAELRD---PRPLPIRWEAPNGSCVS------- 246
++C+ L CG ++ P L D P W + +S
Sbjct: 1453 AQVVCRQLGCGMAVSAPGSARFGQGPGQIVLDDVSCSGQEPYLWSCHHRGWLSHNCGHQE 1632
Query: 247 -----LQQCFQKTTAQEGGQALTVICSD---FQPKVQSRLVGGSSVCEGIAEVRQRSQWE 298
TT TVI F ++ RL GS C+G EV + W
Sbjct: 1633 DAGVICSDAMAMTTPPPDTWPTTVIYESTPHFPSGLELRLANGSDRCQGRVEVLYQGSWG 1812
Query: 299 ALCDSSAARGRGRWEELCREQQCGDLIS 326
+CD + +CR+ CG +S
Sbjct: 1813 TVCDDGWDINDA--QVVCRQLGCGTAVS 1890
Score = 53.9 bits (128), Expect = 3e-05
Identities = 71/337 (21%), Positives = 113/337 (33%), Gaps = 42/337 (12%)
Frame = +1
Query: 32 IQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLAL 91
+++ L+ + +CQG+VE+ + W TVC W ++ A VC+QL CG ++
Sbjct: 568 LELRLANGSDRCQGRVEVLYQGSWGTVCDDGWDIN--------DAQVVCRQLGCGMAVSA 723
Query: 92 GPFPSLNRPQNQVF---------------CQGSPWSISNCNNTSSQDQCLPLSLICLEPQ 136
+ Q+ C W NC + ++ P
Sbjct: 724 PGSARFGQGPGQIVLDDVSCSGQEPYLWSCHHRGWLSHNCGHQEDAGVICSDAVPTTTPP 903
Query: 137 RXXXXXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVE-FYNGSWGGTILYKAKDRPLG 195
L+L G + RC G VE Y GSW GT+ D +
Sbjct: 904 -PDTWPTTVIYESSPVFPSGLELRLANGSD--RCQGRVEVLYQGSW-GTVCDDGWD--IN 1065
Query: 196 LGNLICKSLQCGSFLTHLSGTEAAGTPAPAELRD---PRPLPIRWEAPNGSCVSLQQCFQ 252
++C+ L CG+ ++ P L D P W + +S C
Sbjct: 1066DAQVVCRQLGCGTAVSAPGSARFGQGPGQIVLDDVSCSGQEPYLWSCHHRGWLS-HNCGH 1242
Query: 253 KTTAQEGGQALTVICSD-----------------------FQPKVQSRLVGGSSVCEGIA 289
+ A VICSD F ++ +L GS C+G
Sbjct: 1243QEDA-------GVICSDAMAMTTPLPDTWPTTVIHESTPVFPSGLELQLANGSDRCQGRV 1401
Query: 290 EVRQRSQWEALCDSSAARGRGRWEELCREQQCGDLIS 326
EV + +CD + +CR+ CG +S
Sbjct: 1402EVLYQG---TVCDDGWDINDA--QVVCRQLGCGMAVS 1497
Score = 48.9 bits (115), Expect = 0.001
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Frame = +1
Query: 21 CLGQSGRGGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVC 80
C G R + V L +++CQG+VE+ W TVC SW ++ AS VC
Sbjct: 2434 CSGPDSR----LAVRLVNGSTRCQGRVEVLYRGSWGTVCDDSWDIN--------DASVVC 2577
Query: 81 KQLRCGDPLALGPFPSLNRPQNQVF-----CQGSPWSISNCNN 118
+QL CG ++ + +F C G + NC++
Sbjct: 2578 RQLGCGWAVSAPGSARFGQGSGSIFLDEVSCSGQEPYLWNCSH 2706
Score = 48.5 bits (114), Expect = 0.001
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Frame = +1
Query: 35 MLSGSNS--KCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLAL- 91
++SG++S C G+VEI +W TVC SW + Q A VC+QL+CGD ++
Sbjct: 3205 LVSGNSSYGACAGRVEIYHGGRWGTVCDDSW--------DTQDAQVVCRQLQCGDAVSAP 3360
Query: 92 --GPFPSLNRP--QNQVFCQGSPWSISNCNNTS 120
F S + P + V C G+ ++ C + S
Sbjct: 3361 GGAYFGSGSGPITLDDVNCSGTEATLWQCRSQS 3459
Score = 35.8 bits (81), Expect = 9.7
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Frame = +1
Query: 268 SDFQPKVQSRLVGGSS---VCEGIAEVRQRSQWEALCDSSAARGRGRWEE-----LCREQ 319
+ F RLV G+S C G E+ +W +CD S W+ +CR+
Sbjct: 3175 NSFPRDASLRLVSGNSSYGACAGRVEIYHGGRWGTVCDDS-------WDTQDAQVVCRQL 3333
Query: 320 QCGDLIS 326
QCGD +S
Sbjct: 3334 QCGDAVS 3354
>ref|NM_053094.1| Mus musculus CD163 antigen (Cd163), mRNA
Length = 4405
Score = 79.7 bits (195), Expect = 6e-13
Identities = 79/313 (25%), Positives = 122/313 (38%), Gaps = 15/313 (4%)
Frame = +1
Query: 29 GLDIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDP 88
G D+ + L S+C G++E++ + +W TVC +W L + AS VCKQL C P
Sbjct: 862 GADLSLRLVDGVSRCSGRLEVRFQGEWGTVCDDNWDL--------RDASVVCKQLGC--P 1011
Query: 89 LALGPFPSLNRPQ-------NQVFCQGSPWSISNCNNTS-SQDQCLPLSLICLEPQRXXX 140
A+ +N + + + C+G ++ C + + C
Sbjct: 1012 TAISAIGRVNASEGSGQIWLDNISCEGHEATLWECKHQEWGKHYC--------------- 1146
Query: 141 XXXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEFYNGSWGGTILYKAKDRPLGLGNLI 200
L+LV G G RC G+VE G + ++ L +++
Sbjct: 1147 -HHREDAGVTCSDGADLELRLVGG--GSRCAGIVEVEIQKLTGKMC--SRGWTLADADVV 1311
Query: 201 CKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCF-QKTTAQEG 259
C+ L CGS L A++ W P GSC + F Q Q G
Sbjct: 1312 CRQLGCGSALQ-----------TQAKIYSKTGATNTWLFP-GSCNGNETTFWQCKNWQWG 1455
Query: 260 G------QALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRWE 313
G + V CS + + RLVGG C G EV+ W ++CD +
Sbjct: 1456 GLSCDNFEEAKVTCSGHR---EPRLVGGEIPCSGRVEVKHGDVWGSVCDFDLSLEAA--S 1620
Query: 314 ELCREQQCGDLIS 326
+CRE QCG ++S
Sbjct: 1621 VVCRELQCGTVVS 1659
Score = 77.0 bits (188), Expect = 4e-12
Identities = 95/369 (25%), Positives = 150/369 (39%), Gaps = 28/369 (7%)
Frame = +1
Query: 28 GGLDIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGD 87
G + ++ L+G + C G+VE+++ +KW TVCS+ W ++ + S VC+QL C
Sbjct: 214 GEMKKELRLAGGENNCSGRVELKIHDKWGTVCSNGWSMN--------EVSVVCQQLGCPT 369
Query: 88 PL-ALGPFPSLNRP----QNQVFCQGSPWSISNCNNTS-SQDQCLPLSLICLEPQRXXXX 141
+ ALG S ++V C G+ ++ +C + + C
Sbjct: 370 SIKALGWANSSAGSGYIWMDKVSCTGNESALWDCKHDGWGKHNC--------------TH 507
Query: 142 XXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVEF-YNGSWGGTILYK--AKDRPLGLGN 198
RL GH RC G VE + G W GT+ +KD +
Sbjct: 508 EKDAGVTCSDGSNLEMRLVNSAGH---RCLGRVEIKFQGKW-GTVCDDNFSKDH----AS 663
Query: 199 LICKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCFQKTTAQ- 257
+ICK L CGS ++ + P L D A NG+ +L C + +
Sbjct: 664 VICKQLGCGSAISFSGSAKLGAGSGPIWLDD--------LACNGNESALWDCKHRGWGKH 819
Query: 258 --EGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRWE-- 313
+ + + VIC + + RLV G S C G EVR + +W +CD + W+
Sbjct: 820 NCDHAEDVGVICLE-GADLSLRLVDGVSRCSGRLEVRFQGEWGTVCDDN-------WDLR 975
Query: 314 ---ELCREQQCGDLIS-FHTVDADKTS-----PGFLCA--QEKLSQCYHLQKKKH-CNKR 361
+C++ C IS V+A + S C + L +C H + KH C+ R
Sbjct: 976 DASVVCKQLGCPTAISAIGRVNASEGSGQIWLDNISCEGHEATLWECKHQEWGKHYCHHR 1155
Query: 362 --VFVTCQD 368
VTC D
Sbjct: 1156EDAGVTCSD 1182
Score = 75.1 bits (183), Expect = 1e-11
Identities = 78/310 (25%), Positives = 126/310 (40%), Gaps = 17/310 (5%)
Frame = +1
Query: 33 QVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLALG 92
Q+ L G +C G+VE+ E W TVC +W ++ A+ VCKQL CG +A+
Sbjct: 2236 QLRLVGGGGRCAGRVEVCHEGSWGTVCDDNWDMTD--------ANVVCKQLDCG--VAIN 2385
Query: 93 PFPSLNRPQ-------NQVFCQGSPWSISNCNNTS-SQDQCL---PLSLICLEPQRXXXX 141
S + ++V C G I C++ + C +IC E
Sbjct: 2386 ATGSAYFGEGAGAIWLDEVICTGKESHIWQCHSHGWGRHNCRHKEDAGVICSE------- 2544
Query: 142 XXXXXXXXXXXXXXXXRLQLVPGHEGLRCTGVVE-FYNGSWGGTILYKAKDRPLGLGNLI 200
L+L CTG +E FYNG+WG + + P +G ++
Sbjct: 2545 --------------FMSLRLTNEAHKENCTGRLEVFYNGTWGS--IGSSNMSPTTVG-VV 2673
Query: 201 CKSLQCGSFLTHLSGTEAAGTPAPAELRDPRPLPI-RWEAPNGSCVSLQQC----FQKTT 255
C+ L C +GT P P++ RP+ + R + P G +L QC +++
Sbjct: 2674 CRQLGCAD-----NGTVK---PIPSDKTPSRPMWVDRVQCPKG-VDTLWQCPSSPWKQRQ 2826
Query: 256 AQEGGQALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRWEEL 315
A Q +IC + + RL G + C G E+ + W +CD S + +
Sbjct: 2827 ASPSSQESWIICDN-----KIRLQEGHTDCSGRVEIWHKGSWGTVCDDSWDLNDAK--VV 2985
Query: 316 CREQQCGDLI 325
C++ CG +
Sbjct: 2986 CKQLGCGQAV 3015
Score = 72.4 bits (176), Expect = 9e-11
Identities = 78/318 (24%), Positives = 126/318 (39%), Gaps = 17/318 (5%)
Frame = +1
Query: 35 MLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDPLALGPF 94
+++ + +C G+VEI+ + KW TVC ++ S+DH AS +CKQL CG ++
Sbjct: 559 LVNSAGHRCLGRVEIKFQGKWGTVCDDNF--SKDH------ASVICKQLGCGSAISFSGS 714
Query: 95 PSLNRPQNQVF-----CQGSPWSISNCNNTS----SQDQCLPLSLICLEPQRXXXXXXXX 145
L ++ C G+ ++ +C + + D + +ICLE
Sbjct: 715 AKLGAGSGPIWLDDLACNGNESALWDCKHRGWGKHNCDHAEDVGVICLE----------- 861
Query: 146 XXXXXXXXXXXXRLQLVPGHEGLRCTGVVEF-YNGSWGGTILYKAKDRPLGLGNLICKSL 204
L+LV G RC+G +E + G W GT+ D L +++CK L
Sbjct: 862 --------GADLSLRLVDGVS--RCSGRLEVRFQGEW-GTVCDDNWD--LRDASVVCKQL 1002
Query: 205 QCGSFLTHLSGTEAAGTPAPAELRDPRPLPIRWEAPNGSCVSLQQCFQKTTAQEGG---- 260
C + ++ + A+ L N SC + + QE G
Sbjct: 1003GCPTAISAIGRVNASEGSGQIWL------------DNISCEGHEATLWECKHQEWGKHYC 1146
Query: 261 ---QALTVICSDFQPKVQSRLVGGSSVCEGIAEVRQRSQWEALCDSSAARGRGRWEELCR 317
+ V CSD ++ RLVGG S C GI EV + +C + +CR
Sbjct: 1147HHREDAGVTCSD-GADLELRLVGGGSRCAGIVEVEIQKLTGKMCSRGWTLADA--DVVCR 1317
Query: 318 EQQCGDLISFHTVDADKT 335
+ CG + KT
Sbjct: 1318QLGCGSALQTQAKIYSKT 1371
Score = 71.2 bits (173), Expect = 2e-10
Identities = 75/312 (24%), Positives = 121/312 (38%), Gaps = 18/312 (5%)
Frame = +1
Query: 29 GLDIQVMLSGSNSKCQGQVEIQMENKWKTVCSSSWRLSQDHSKNAQQASAVCKQLRCGDP 88
G D+++ L G S+C G VE++++ +CS W L+ A VC+QL CG
Sbj