TBLASTN 2.2.2 [Dec-14-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(196 letters)
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS, or phase 0, 1 or 2 HTGS sequences)
1,171,752 sequences; 566,364,212 total letters
Searching... please wait.. done
Score E
Sequences producing significant alignments: (bits) Value
gb|BC003817.1|BC003817 Mus musculus, platelet derived growt... 363 5e-99
ref|NM_008808.1| Mus musculus platelet derived growth facto... 363 5e-99
gb|M29464.1|MUSPDGFA Mouse platelet-derived growth factor A... 363 5e-99
gb|L06894.1|RATPDGFAX Rattus norvegicus (clones PTZ 18r 5.3... 357 2e-97
gb|L06238.1|RATPRGF Rat platelet-derived growth factor A ch... 355 8e-97
emb|Z14120.1|RNPDGFACP R.norvegicus mRNA for platelet-deriv... 347 2e-94
emb|X06374.1|HSPDGFA Human mRNA for platelet-derived growth... 339 8e-92
ref|NM_033023.1| Homo sapiens platelet-derived growth facto... 339 8e-92
emb|X03795.1|HSPDGFAR Human mRNA for platelet derived growt... 333 4e-90
ref|NM_002607.2| Homo sapiens platelet-derived growth facto... 333 4e-90
dbj|AB031023.1|AB031023 Gallus gallus PDGF-A (S2) mRNA for ... 310 3e-83
dbj|AB031021.1|AB031021 Gallus gallus PDGF-A (S1) mRNA for ... 308 1e-82
dbj|AB031022.1|AB031022 Gallus gallus PDGF-A (L) mRNA for p... 308 1e-82
gb|AF188841.1|AF188841 Gallus gallus platelet-derived growt... 306 7e-82
dbj|D10106.1|RATPDGFA Rat mRNA for platelet-derived growth ... 303 6e-81
dbj|AB028637.1|AB028637 Mesocricetus auratus mRNA for PDGF ... 297 3e-79
gb|S57864.1|S57864 platelet-derived growth factor A-chain [... 285 2e-75
gb|M23238.1|XELPDGFAA X.laevis platelet-derived growth fact... 283 5e-75
emb|X17545.1|XLPDGFAC Xenopus mRNA for platelet-derived gro... 277 3e-73
gb|M23237.1|XELPDGFA X.laevis platelet-derived growth facto... 277 3e-73
dbj|AK017169.1|AK017169 Mus musculus 11 days pregnant adult... 245 1e-63
gb|AF200950.1|AF200950 Danio rerio platelet-derived growth ... 221 3e-56
gb|M20491.1|HUMPDGA4 Human platelet-derived growth factor A... 143 6e-33
emb|V01201.1|RESSV1 Simian sarcoma virus proviral sequence ... 143 6e-33
gb|M19986.1|HUMPDGFA4 Human platelet-derived growth factor ... 143 8e-33
emb|X83705.1|HSRNASIS H.sapiens mRNA for c-sis proto-oncogene 142 1e-32
emb|X02811.1|HSPDGFB Human mRNA for platelet-derived growth... 142 1e-32
ref|NM_033016.1| Homo sapiens platelet-derived growth facto... 142 1e-32
gb|M12783.1|HUMSISPDG Human c-sis/platelet-derived growth f... 142 1e-32
ref|NM_002608.1| Homo sapiens platelet-derived growth facto... 142 1e-32
emb|X02744.1|HSCSIST Human mRNA for c-sis gene (clone pSM-1) 142 1e-32
ref|XM_009997.2| Homo sapiens platelet-derived growth facto... 142 1e-32
dbj|AB031025.1|AB031025 Gallus gallus PDGF-B mRNA for plate... 142 2e-32
gb|AF162784.1|AF162784 Mus musculus platelet-derived growth... 141 2e-32
ref|NM_011057.1| Mus musculus platelet derived growth facto... 141 2e-32
emb|X03702.1|HSPDGFB1 Human osteosarcoma cell line U-2 OS m... 141 3e-32
emb|Z14117.1|RNPDGFBCP R.norvegicus mRNA for platelet-deriv... 141 3e-32
gb|S66871.1|S66868S4 platelet-derived growth factor A-chain... 140 7e-32
emb|X05112.1|FSSISMSG Feline mRNA for c-sis proto-oncogene ... 139 1e-31
emb|X97123.1|OZRNAPDGF O.aries mRNA for platelet-derived gr... 137 6e-31
dbj|AB028638.1|AB028638 Mesocricetus auratus mRNA for PDGF ... 132 1e-29
gb|L41623.1|RATRATC Rattus rattus (clone Rc-sis) pdgf prote... 124 3e-27
emb|X63966.1|HSPDGFBB H.sapiens synthetic gene for platelet... 121 3e-26
gb|L40991.1|RATPDGF Rattus norvegicus (clone 3-4a) growth f... 120 6e-26
emb|Z81010.2|HSN10C3 Human DNA sequence from clone LL22NC03... 90 8e-17
emb|X06300.1|FSSISG4 F.silvestris c-sis proto-oncogene exon... 90 1e-16
gb|M25356.1|CATSIS4 Feline c-sis proto-oncogene, segment 4 90 1e-16
gb|K01399.1|HUMSISA4 Human c-sis proto-oncogene for platele... 89 1e-16
gb|K01915.1|HUMSIS3 Human platelet-derived growth factor (c... 89 2e-16
emb|X00560.1|HSSISB3 Human proto-oncogene c-sis fragment fo... 89 2e-16
gb|S66872.1|S66868S5 platelet-derived growth factor A-chain... 86 1e-15
gb|M84451.1|MUSSIS04 Mus musculus platelet-derived growth f... 86 2e-15
gb|M64847.1|MUSCSIS04 Mouse platelet-derived growth factor ... 86 2e-15
gb|M83575.1|HUMPDGFAB Human platelet-derived growth factor ... 83 1e-14
gb|M19987.1|HUMPDGFA5 Human platelet-derived growth factor ... 83 1e-14
gb|M20492.1|HUMPDGA5 Human platelet-derived growth factor A... 83 1e-14
emb|Y15920.1|HSY15920 Homo sapiens mRNA for chimaeric trans... 80 9e-14
emb|Y08643.1|HSCOLPCHT H.sapiens mRNA for COL1A1 and PDGFB ... 80 9e-14
emb|Y15921.1|HSY15921 Homo sapiens mRNA for chimaeric trans... 78 3e-13
gb|S66870.1|S66868S3 platelet-derived growth factor A-chain... 75 3e-12
gb|J02396.1|SEG_SSVPCS2 Simian sarcoma virus v-sis transfor... 69 2e-10
gb|S66869.1|S66868S2 platelet-derived growth factor A-chain... 66 2e-09
gb|S62078.1|S62078 platelet-derived growth factor A-chain {... 65 4e-09
gb|M20489.1|HUMPDGA2 Human platelet-derived growth factor A... 65 4e-09
emb|AJ401391.1|DME401391 Drosophila melanogaster mRNA for P... 65 4e-09
ref|NM_078683.1| Drosophila melanogaster PDGF- and VEGF-rel... 65 4e-09
gb|AY051751.1| Drosophila melanogaster LD28763 full length ... 65 4e-09
gb|M19984.1|HUMPDGFA2 Human platelet-derived growth factor ... 65 4e-09
emb|AJ238420.1|HSA238420 Homo sapiens PDGFA gene for platel... 65 4e-09
gb|M19985.1|HUMPDGFA3 Human platelet-derived growth factor ... 64 5e-09
gb|AC018490.6| Drosophila melanogaster, chromosome X, regio... 63 1e-08
gb|AE003510.2|AE003510 Drosophila melanogaster genomic scaf... 63 1e-08
gb|M20490.1|HUMPDGA3 Human platelet-derived growth factor A... 60 1e-07
gb|AF059661.1|AF059661 Danio rerio vascular endothelial gro... 54 5e-06
gb|AF008594.1|AF008594 Xenopus laevis vascular endothelial ... 54 5e-06
gb|AF016244.1|AF016244 Danio rerio vascular endothelial gro... 54 5e-06
gb|AF008593.1|AF008593 Xenopus laevis vascular endothelial ... 54 5e-06
dbj|AB004274.1|AB004274 Bos taurus mRNA for vascular endoth... 52 3e-05
dbj|AB004273.1|AB004273 Bos taurus mRNA for vascular endoth... 52 3e-05
ref|NM_011697.1| Mus musculus vascular endothelial growth f... 50 7e-05
gb|U43836.1|MMU43836 Mus musculus VEGF-related factor mvrf1... 50 7e-05
gb|U43837.1|MMU43837 Mus musculus VEGF-related factor mvrf1... 50 7e-05
gb|AF022952.1|AF022952 Rattus norvegicus vascular endotheli... 50 7e-05
gb|U52820.1|MMU52820 Mus musculus vascular endothelial grow... 50 7e-05
gb|U48800.1|MMU48800 Mus musculus vascular endothelial grow... 50 7e-05
gb|U43369.1|HSU43369 Human VEGF related factor isoform VRF1... 50 9e-05
ref|NM_003377.1| Homo sapiens vascular endothelial growth f... 50 9e-05
gb|U52819.1|HSU52819 Human vascular endothelial growth fact... 50 9e-05
gb|U48801.1|HSU48801 Human vascular endothelial growth fact... 50 9e-05
ref|XM_049177.2| Homo sapiens vascular endothelial growth f... 50 9e-05
gb|BC008818.1|BC008818 Homo sapiens, vascular endothelial g... 50 9e-05
ref|NM_065060.1| Caenorhabditis elegans 50 9e-05
gb|U43368.1|HSU43368 Human VEGF related factor isoform VRF1... 50 9e-05
gb|AF032925.1|AF032925 Rattus norvegicus vascular endotheli... 47 6e-04
gb|AY032728.1| Rattus norvegicus VEGF-D mRNA, complete cds 46 0.001
ref|NM_031761.1| Rattus norvegicus c-fos induced growth fac... 46 0.001
gb|AF014827.1|AF014827 Rattus norvegicus vascular endotheli... 46 0.001
gb|S67520.1|S67520 A3R=F9L homolog...A1R {inverted terminal... 46 0.002
gb|AF106020.1|AF106020 Orf virus vascular endothelial growt... 45 0.002
gb|BC007789.1|BC007789 Homo sapiens, placental growth facto... 45 0.002
gb|BC001422.1|BC001422 Homo sapiens, Similar to placental g... 45 0.002
gb|AY033151.1| Bothrops insularis vascular endothelial grow... 45 0.002
gb|BC007255.1|BC007255 Homo sapiens, clone MGC:15513 IMAGE:... 45 0.002
dbj|D89628.1|D89628 Mus musculus mRNA for vascular endothel... 45 0.003
gb|S72960.1|S72960 Homo sapiens placenta growth factor 2 (P... 45 0.003
ref|XM_040407.1| Homo sapiens placental growth factor, vasc... 45 0.003
emb|Y09268.1|ASPLGF Artificial sequence DNA for placental g... 45 0.003
ref|NM_010216.1| Mus musculus c-fos induced growth factor (... 45 0.003
emb|X99572.1|MMFIGF Mus musculus mRNA for new member of PDG... 45 0.003
ref|NM_002632.1| Homo sapiens placental growth factor, vasc... 45 0.003
emb|X54936.1|HSPLGF H.sapiens mRNA for placenta growth fact... 45 0.003
dbj|AB011078.1|AB011078 Gallus gallus mRNA for VEGF, comple... 44 0.005
gb|S79680.1|S79680 VEGF=vascular endothelial growth factor ... 44 0.005
ref|XM_104830.1| Homo sapiens similar to c-fos induced grow... 44 0.007
ref|NM_004469.1| Homo sapiens c-fos induced growth factor (... 44 0.007
dbj|AB004272.1|AB004272 Bos taurus mRNA for placenta growth... 44 0.007
emb|AJ000185.1|HSAJ185 Homo Sapiens mRNA for vascular endot... 44 0.007
dbj|D89630.1|D89630 Homo sapiens mRNA for VEGF-D, complete cds 44 0.007
ref|XM_058314.1| Homo sapiens c-fos induced growth factor (... 44 0.007
emb|Y12863.1|HSY12863 Homo sapiens mRNA for growth factor FIGF 44 0.007
gb|AF080594.1|AF080594 Rattus norvegicus vascular endotheli... 44 0.009
gb|AF432867.1|AF432867 Meriones unguiculatus vascular endot... 43 0.012
gb|S67522.1|S67522 A3R=F9L homolog...A1R {inverted terminal... 43 0.012
gb|U58112.1|MMU58112 Mus musculus Flt4 ligand J7 mRNA, comp... 43 0.015
emb|X94216.1|HSVEGFC H.sapiens mRNA for VEGF-C protein 43 0.015
ref|NM_005429.1| Homo sapiens vascular endothelial growth f... 43 0.015
gb|U43142.1|HSU43142 Human vascular endothelial growth fact... 43 0.015
gb|U58111.1|HSU58111 Human FLT4 ligand mRNA, complete cds 43 0.015
gb|AY032729.1| Rattus norvegicus VEGF-C mRNA, complete cds 43 0.015
ref|NM_009506.1| Mus musculus vascular endothelial growth f... 43 0.015
ref|NM_053653.1| Rattus norvegicus vascular endothelial gro... 43 0.015
gb|U73620.1|MMU73620 Mus musculus VEGF-C mRNA, complete cds 43 0.015
gb|M33750.1|BOVVEGFB Bovine vascular endothelial growth fac... 42 0.020
gb|M32976.1|BOVEGFA Bovine heparin-binding vascular endothe... 42 0.020
gb|AF071015.1|AF071015 Ovis aries vascular endothelial grow... 42 0.020
emb|X89506.1|OAVEGF O.aries mRNA for vascular endothelial g... 42 0.020
gb|AF250375.1|AF250375 Ovis aries vascular endothelial grow... 42 0.020
gb|M31836.1|BOVVEGFA Bovine vascular endothelial growth fac... 42 0.020
dbj|AB004275.1|AB004275 Bos taurus mRNA for vascular endoth... 42 0.026
emb|Y15837.1|CCY15837 Coturnix coturnix mRNA for vascular e... 42 0.026
gb|AC092673.3| Homo sapiens chromosome 4 clone RP11-624A4, ... 42 0.034
gb|AF215726.1|AF215726 Rattus norvegicus vascular endotheli... 42 0.034
gb|AF152593.1|AF152593 Capreolus capreolus vascular endothe... 42 0.034
ref|NM_009505.1| Mus musculus vascular endothelial growth f... 42 0.034
gb|M95200.1|MUSVEGF Mouse vascular endothelial growth facto... 42 0.034
gb|AF152594.1|AF152594 Capreolus capreolus vascular endothe... 42 0.034
gb|M32167.1|RATGFGDVA Rat glioma-derived vascular endotheli... 41 0.044
gb|S38083.1|S38083 vascular endothelial growth factor-1=ang... 41 0.044
gb|AY033506.1| Rattus norvegicus clone 5 vascular endotheli... 41 0.044
gb|AY033504.1| Rattus norvegicus clone 2 vascular endotheli... 41 0.044
gb|M84230.1|GPIVEGFA Guinea pig vascular endothelial growth... 41 0.057
gb|AY033508.1| Rattus norvegicus clone 10 vascular endothel... 40 0.075
gb|AF260738.1|AF260738 Homo sapiens platelet-derived growth... 40 0.075
gb|AF244813.1|AF244813 Homo sapiens platelet-derived growth... 40 0.075
gb|AY033503.1| Rattus norvegicus clone 1 vascular endotheli... 40 0.075
gb|S37052.1|S37052 vascular endothelial growth factor-3=ang... 40 0.075
ref|NM_016205.1| Homo sapiens platelet derived growth facto... 40 0.075
gb|AF091434.1|AF091434 Homo sapiens secretory growth factor... 40 0.075
gb|AF186236.1|AF186236 Spalax ehrenbergi vascular endotheli... 40 0.075
gb|S38100.1|S38100 vascular endothelial growth factor-2=ang... 40 0.075
dbj|AB033831.1|AB033831 Homo sapiens hSCDGF mRNA for spinal... 40 0.075
emb|AX028085.1|AX028085 Sequence 56 from Patent WO0037641 40 0.075
emb|AX028064.1|AX028064 Sequence 35 from Patent WO0037641 40 0.075
gb|AF222779.1|AF222779 Rattus norvegicus vascular endotheli... 40 0.075
emb|AX028032.1|AX028032 Sequence 3 from Patent WO0037641 40 0.075
gb|AY033507.1| Rattus norvegicus clone 6 vascular endotheli... 40 0.075
ref|NM_031836.1| Rattus norvegicus vascular endothelial gro... 40 0.075
gb|AF215725.1|AF215725 Rattus norvegicus vascular endotheli... 40 0.075
dbj|AB020216.1|AB020216 Oryctolagus cuniculus mRNA for vasc... 40 0.098
gb|AF022179.1|AF022179 Oryctolagus cuniculus vascular endot... 40 0.098
gb|AF133249.1|AF133249 Canis familiaris vascular endothelia... 40 0.13
gb|K01400.1|HUMSISA5 Human c-sis proto-oncogene for platele... 40 0.13
gb|AF286725.1|AF286725 Mus musculus platelet-derived growth... 40 0.13
gb|AF133250.1|AF133250 Canis familiaris vascular endothelia... 40 0.13
gb|K01916.1|HUMSIS4 Human platelet-derived growth factor (c... 40 0.13
dbj|AB053350.1|AB053350 Equus caballus mRNA for vascular en... 40 0.13
emb|X00561.1|HSSISB4 Human proto-oncogene c-sis fragment fo... 40 0.13
gb|M84452.1|MUSSIS05 Mus musculus platelet-derived growth f... 40 0.13
gb|M64848.1|MUSCSIS05 Mouse platelet-derived growth factor ... 40 0.13
gb|AF266467.1|AF266467 Mus musculus platelet-derived growth... 39 0.17
gb|S85192.1|S85192 Homo sapiens vascular endothelial growth... 39 0.17
emb|AJ010438.1|HSA010438 Homo sapiens mRNA for vascular end... 39 0.17
dbj|AB071947.1|AB071947 Felis catus mRNA for vascular endot... 39 0.17
gb|M27281.1|HUMVPF Human vascular permeability factor mRNA,... 39 0.17
gb|AY072734.1| Sus scrofa vascular endothelial growth facto... 39 0.17
gb|AF133248.1|AF133248 Canis familiaris vascular endothelia... 39 0.17
ref|NM_019971.1| Mus musculus platelet-derived growth facto... 39 0.17
gb|AF117608.1|AF117608 Mus musculus fallotein mRNA, complet... 39 0.17
emb|AJ133758.1|CFA133758 Canis familiaris mRNA for vascular... 39 0.17
gb|AF339737.1|AF339737 Macaca mulatta vascular endothelial ... 39 0.22
gb|AF430806.1|AF430806 Homo sapiens vascular endothelial gr... 39 0.22
gb|AY047581.1| Homo sapiens vascular endothelial growth fac... 39 0.22
gb|AF318502.1|AF318502 Sus scrofa vascular endothelial grow... 39 0.22
ref|NM_003376.1| Homo sapiens vascular endothelial growth f... 39 0.22
emb|X62568.1|HSVEGF H.sapiens vegf gene for vascular endoth... 39 0.22
emb|X81380.1|SSVEGF S.scrofa mRNA for vascular endothelial ... 39 0.22
emb|X06301.1|FSSISG6 F.silvestris c-sis proto-oncogene exon... 39 0.22
gb|M25357.1|CATSIS5 Feline c-sis proto-oncogene, segment 5 39 0.22
gb|AF214570.1|AF214570 Homo sapiens vascular endothelial gr... 39 0.22
emb|AJ278192.1|CJA278192 Callithrix jacchus partial mRNA fo... 39 0.22
gb|S82167.1|S82167 simVEGF165=vascular endothelial growth f... 39 0.22
dbj|AB021221.1|AB021221 Homo sapiens mRNA for vascular endo... 39 0.22
gb|AF091352.1|AF091352 Homo sapiens vascular permeability f... 39 0.22
gb|M32977.1|HUMEGFAA Human heparin-binding vascular endothe... 39 0.22
emb|Y12866.1|HSY12866 Homo sapiens FIGF gene, exon 3 39 0.28
ref|NM_031317.1| Rattus norvegicus platelet-derived growth ... 39 0.28
dbj|AB033830.1|AB033830 Rattus norvegicus rScdgf mRNA for s... 39 0.28
gb|AY033152.1| Bothrops jararaca vascular endothelial growt... 39 0.28
gb|L20913.1|RATVEGF3H Rat vascular endothelial growth facto... 39 0.28
gb|AF099134.1|AF099134 Bos taurus vascular endothelial grow... 38 0.37
gb|U50279.1|MMU50279 Mus musculus VEGF115 mRNA, complete cds 38 0.37
gb|AF297627.1|AF297627 Mesocricetus auratus vascular endoth... 38 0.37
dbj|AB033829.1|AB033829 Gallus gallus SCDGF mRNA for spinal... 38 0.37
gb|AF063013.1|AF063013 Mesocricetus auratus endothelial gro... 38 0.37
ref|XM_087972.1| Homo sapiens similar to dJ261G23.6.5 (vasc... 37 0.63
dbj|AK056914.1|AK056914 Homo sapiens cDNA FLJ32352 fis, clo... 37 0.63
gb|AF437895.1|AF437895 Homo sapiens vascular endothelial gr... 37 0.63
emb|AL136131.15|AL136131 Human DNA sequence from clone RP1-... 37 0.63
gb|M63973.1|HUMVEGF3 Human vascular endothelial growth fact... 37 0.63
ref|XM_096295.1| Homo sapiens c-fos induced growth factor (... 37 0.63
ref|XM_071640.1| Homo sapiens hypothetical gene supported b... 37 0.63
ref|NM_008827.1| Mus musculus placental growth factor (Pgf)... 37 1.1
gb|AF083221.1|AF083221 Fugu rubripes putative neurotransmit... 37 1.1
emb|X96793.1|MMPGF M.musculus mRNA for placenta growth factor 37 1.1
emb|X80171.1|MMP1GF Mus musculus mRNA for placenta growth f... 37 1.1
gb|BC016567.1|BC016567 Mus musculus, placental growth facto... 37 1.1
gb|AC006530.4|AC006530 Homo sapiens chromosome 14 clone BAC... 36 1.4
dbj|AK003359.1|AK003359 Mus musculus 18 days embryo whole b... 36 1.8
dbj|AB033832.1|AB033832 Homo sapiens hSCDGF-B mRNA for spin... 36 1.8
gb|AY027517.1| Homo sapiens iris-expressed growth factor lo... 36 1.8
gb|M84449.1|MUSSIS02 Mus musculus platelet-derived growth f... 36 1.8
gb|AF335584.1|AF335584 Homo sapiens platelet-derived growth... 36 1.8
ref|NM_033135.1| Homo sapiens spinal cord-derived growth fa... 36 1.8
dbj|AB052170.1|AB052170 Rattus norvegicus rSCDGF-B mRNA for... 36 1.8
gb|AF336376.1|AF336376 Homo sapiens platelet-derived growth... 36 1.8
ref|NM_025208.2| Homo sapiens spinal cord-derived growth fa... 36 1.8
gb|AF335583.1|AF335583 Mus musculus platelet-derived growth... 36 1.8
gb|AY027518.1| Homo sapiens iris-expressed growth factor sh... 36 1.8
gb|AF113216.1|AF113216 Homo sapiens MSTP036 mRNA, complete cds 36 1.8
gb|M64845.1|MUSCSIS02 Mouse platelet-derived growth factor ... 36 1.8
gb|AC008483.7| Homo sapiens chromosome 5 clone CTC-406I6, c... 35 2.4
gb|AC010423.7|AC010423 Homo sapiens chromosome 5 clone CTD-... 35 2.4
gb|AF022375.1|AF022375 Homo sapiens vascular endothelial gr... 35 3.1
ref|NM_053595.1| Rattus norvegicus placental growth factor ... 35 4.1
gb|L40030.1|RATPLGF Rattus norvegicus placenta growth facto... 35 4.1
ref|XM_059399.2| Homo sapiens similar to putative (LOC13010... 34 5.4
gb|AF399758.1|AF399758 Pseudomonas fluorescens L-aspartate ... 34 5.4
emb|AL020993.1|HS5O6 Human DNA sequence from clone RP1-5O6 ... 34 7.0
emb|Z34093.1|TGVPOLL Transmissible gastroenteritis virus (P... 34 7.0
gb|AC091393.2| Homo sapiens chromosome 5 clone CTC-571O20, ... 34 7.0
gb|AC003675.1|AC003675 Human Chromosome 11p15.5 P1 - 6959, ... 33 9.2
gb|AC009844.6| Drosophila melanogaster, chromosome 2R, regi... 33 9.2
gb|AC005706.6|AC005706 Drosophila melanogaster, chromosome ... 33 9.2
dbj|AP001521.4|AP001521 Homo sapiens genomic DNA, chromosom... 33 9.2
gb|U52732.1|BBU52732 Bufo biporcatus TNHC 53890 12S ribosom... 33 9.2
gb|AC005950.1|AC005950 Homo sapiens Chromosome 11p15.5 PAC ... 33 9.2
gb|AE003812.2|AE003812 Drosophila melanogaster genomic scaf... 33 9.2
>gb|BC003817.1|BC003817 Mus musculus, platelet derived growth factor, alpha, clone MGC:6173
IMAGE:3495629, mRNA, complete cds
Length = 1028
Score = 363 bits (931), Expect = 5e-99
Identities = 180/196 (91%), Positives = 180/196 (91%)
Frame = +3
Query: 1 MRTWXXXXXXXXXXXXXXXXEEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE 60
MRTW EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE
Sbjct: 183 MRTWACLLLLGCGYLAHALAEEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE 362
Query: 61 TSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIW 120
TSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIW
Sbjct: 363 TSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIW 542
Query: 121 PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA 180
PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA
Sbjct: 543 PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA 722
Query: 181 TSNLNPDHREEETDVR 196
TSNLNPDHREEETDVR
Sbjct: 723 TSNLNPDHREEETDVR 770
>ref|NM_008808.1| Mus musculus platelet derived growth factor, alpha (Pdgfa), mRNA
Length = 906
Score = 363 bits (931), Expect = 5e-99
Identities = 180/196 (91%), Positives = 180/196 (91%)
Frame = +3
Query: 1 MRTWXXXXXXXXXXXXXXXXEEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE 60
MRTW EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE
Sbjct: 63 MRTWACLLLLGCGYLAHALAEEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE 242
Query: 61 TSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIW 120
TSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIW
Sbjct: 243 TSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIW 422
Query: 121 PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA 180
PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA
Sbjct: 423 PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA 602
Query: 181 TSNLNPDHREEETDVR 196
TSNLNPDHREEETDVR
Sbjct: 603 TSNLNPDHREEETDVR 650
>gb|M29464.1|MUSPDGFA Mouse platelet-derived growth factor A chain (PDGFA) mRNA, complete
cds
Length = 906
Score = 363 bits (931), Expect = 5e-99
Identities = 180/196 (91%), Positives = 180/196 (91%)
Frame = +3
Query: 1 MRTWXXXXXXXXXXXXXXXXEEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE 60
MRTW EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE
Sbjct: 63 MRTWACLLLLGCGYLAHALAEEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE 242
Query: 61 TSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIW 120
TSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIW
Sbjct: 243 TSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIW 422
Query: 121 PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA 180
PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA
Sbjct: 423 PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA 602
Query: 181 TSNLNPDHREEETDVR 196
TSNLNPDHREEETDVR
Sbjct: 603 TSNLNPDHREEETDVR 650
>gb|L06894.1|RATPDGFAX Rattus norvegicus (clones PTZ 18r 5.3 and PTZ 18r 4.1)
platelet-derived growth factor A-chain (PDGF A) mRNA,
complete cds
Length = 1009
Score = 357 bits (917), Expect = 2e-97
Identities = 176/196 (89%), Positives = 178/196 (90%)
Frame = +2
Query: 1 MRTWXXXXXXXXXXXXXXXXEEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE 60
MRTW EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE
Sbjct: 131 MRTWACLLLLGCGYLAHALAEEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE 310
Query: 61 TSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIW 120
T+LRAHGSH + HVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIW
Sbjct: 311 TNLRAHGSHTVKHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIW 490
Query: 121 PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA 180
PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA
Sbjct: 491 PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA 670
Query: 181 TSNLNPDHREEETDVR 196
TSNLNPDHREEETDVR
Sbjct: 671 TSNLNPDHREEETDVR 718
>gb|L06238.1|RATPRGF Rat platelet-derived growth factor A chain mRNA, complete cds
Length = 1336
Score = 355 bits (912), Expect = 8e-97
Identities = 175/196 (89%), Positives = 177/196 (90%)
Frame = +1
Query: 1 MRTWXXXXXXXXXXXXXXXXEEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE 60
MRTW EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE
Sbjct: 487 MRTWACLLLLGCGYLAHALAEEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE 666
Query: 61 TSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIW 120
T+LRAHGSH + HVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFL W
Sbjct: 667 TNLRAHGSHTVKHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLTW 846
Query: 121 PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA 180
PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA
Sbjct: 847 PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA 1026
Query: 181 TSNLNPDHREEETDVR 196
TSNLNPDHREEETDVR
Sbjct: 1027TSNLNPDHREEETDVR 1074
>emb|Z14120.1|RNPDGFACP R.norvegicus mRNA for platelet-derived growth factor A chain
(partial)
Length = 593
Score = 347 bits (891), Expect = 2e-94
Identities = 170/176 (96%), Positives = 172/176 (97%)
Frame = +2
Query: 21 EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPV 80
EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALET+LRAHGSH + HVPEKRPV
Sbjct: 41 EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETNLRAHGSHTVKHVPEKRPV 220
Query: 81 PIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKC 140
PIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKC
Sbjct: 221 PIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKC 400
Query: 141 QPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPDHREEETDVR 196
QPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPDHREEET R
Sbjct: 401 QPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPDHREEETGRR 568
>emb|X06374.1|HSPDGFA Human mRNA for platelet-derived growth factor PDGF-A
Length = 2305
Score = 339 bits (869), Expect = 8e-92
Identities = 163/176 (92%), Positives = 173/176 (97%)
Frame = +2
Query: 21 EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPV 80
EEAEIPRE+IERLARSQIHSIRDLQRLLEIDSVG+ED+L+TSLRAHG HA HVPEKRP+
Sbjct: 464 EEAEIPREVIERLARSQIHSIRDLQRLLEIDSVGSEDSLDTSLRAHGVHATKHVPEKRPL 643
Query: 81 PIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKC 140
PIRRKRSIEEA+PAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKC
Sbjct: 644 PIRRKRSIEEAVPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKC 823
Query: 141 QPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPDHREEETDVR 196
QPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT++LNPD+REE+TDVR
Sbjct: 824 QPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATTSLNPDYREEDTDVR 991
>ref|NM_033023.1| Homo sapiens platelet-derived growth factor alpha polypeptide
(PDGFA), transcript variant 2, mRNA
Length = 2740
Score = 339 bits (869), Expect = 8e-92
Identities = 163/176 (92%), Positives = 173/176 (97%)
Frame = +2
Query: 21 EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPV 80
EEAEIPRE+IERLARSQIHSIRDLQRLLEIDSVG+ED+L+TSLRAHG HA HVPEKRP+
Sbjct: 899 EEAEIPREVIERLARSQIHSIRDLQRLLEIDSVGSEDSLDTSLRAHGVHATKHVPEKRPL 1078
Query: 81 PIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKC 140
PIRRKRSIEEA+PAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKC
Sbjct: 1079 PIRRKRSIEEAVPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKC 1258
Query: 141 QPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPDHREEETDVR 196
QPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT++LNPD+REE+TDVR
Sbjct: 1259 QPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATTSLNPDYREEDTDVR 1426
>emb|X03795.1|HSPDGFAR Human mRNA for platelet derived growth factor A-chain (PDGF-A)
Length = 1308
Score = 333 bits (854), Expect = 4e-90
Identities = 160/173 (92%), Positives = 170/173 (97%)
Frame = +1
Query: 21 EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPV 80
EEAEIPRE+IERLARSQIHSIRDLQRLLEIDSVG+ED+L+TSLRAHG HA HVPEKRP+
Sbjct: 448 EEAEIPREVIERLARSQIHSIRDLQRLLEIDSVGSEDSLDTSLRAHGVHATKHVPEKRPL 627
Query: 81 PIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKC 140
PIRRKRSIEEA+PAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKC
Sbjct: 628 PIRRKRSIEEAVPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKC 807
Query: 141 QPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPDHREEET 193
QPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT++LNPD+REE+T
Sbjct: 808 QPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATTSLNPDYREEDT 966
>ref|NM_002607.2| Homo sapiens platelet-derived growth factor alpha polypeptide
(PDGFA), transcript variant 1, mRNA
Length = 2797
Score = 333 bits (854), Expect = 4e-90
Identities = 160/173 (92%), Positives = 170/173 (97%)
Frame = +2
Query: 21 EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPV 80
EEAEIPRE+IERLARSQIHSIRDLQRLLEIDSVG+ED+L+TSLRAHG HA HVPEKRP+
Sbjct: 899 EEAEIPREVIERLARSQIHSIRDLQRLLEIDSVGSEDSLDTSLRAHGVHATKHVPEKRPL 1078
Query: 81 PIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKC 140
PIRRKRSIEEA+PAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKC
Sbjct: 1079 PIRRKRSIEEAVPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKC 1258
Query: 141 QPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPDHREEET 193
QPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT++LNPD+REE+T
Sbjct: 1259 QPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATTSLNPDYREEDT 1417
>dbj|AB031023.1|AB031023 Gallus gallus PDGF-A (S2) mRNA for platelet-derived growth factor A
chain short form type 2, partial cds
Length = 773
Score = 310 bits (795), Expect = 3e-83
Identities = 150/194 (77%), Positives = 163/194 (83%)
Frame = +3
Query: 1 MRTWXXXXXXXXXXXXXXXXEEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE 60
MRTW EEAEIP+ELIERLA S+IHSIRDLQRLLEIDSVG +D E
Sbjct: 147 MRTWACVLLIGFGYLSFTSCEEAEIPQELIERLAHSEIHSIRDLQRLLEIDSVGYDDVSE 326
Query: 61 TSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIW 120
T+LR++ H+ HV E RPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQ+DPTSANFLIW
Sbjct: 327 TNLRSYSVHSAKHVQENRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQIDPTSANFLIW 506
Query: 121 PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA 180
PPCVEVKRCTGCCNTSSVKCQPSR+HHRSVKVAKVEYVRKKPKLKEV VRLEEH+EC C
Sbjct: 507 PPCVEVKRCTGCCNTSSVKCQPSRIHHRSVKVAKVEYVRKKPKLKEVLVRLEEHMECTCT 686
Query: 181 TSNLNPDHREEETD 194
++N N D+REEETD
Sbjct: 687 STNTNSDYREEETD 728
>dbj|AB031021.1|AB031021 Gallus gallus PDGF-A (S1) mRNA for platelet-derived growth factor A
chain short form type 1 precursor, complete cds
Length = 1137
Score = 308 bits (789), Expect = 1e-82
Identities = 149/193 (77%), Positives = 162/193 (83%)
Frame = +2
Query: 1 MRTWXXXXXXXXXXXXXXXXEEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE 60
MRTW EEAEIP+ELIERLA S+IHSIRDLQRLLEIDSVG +D E
Sbjct: 56 MRTWACVLLIGFGYLSFTSCEEAEIPQELIERLAHSEIHSIRDLQRLLEIDSVGYDDVSE 235
Query: 61 TSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIW 120
T+LR++ H+ HV E RPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQ+DPTSANFLIW
Sbjct: 236 TNLRSYSVHSAKHVQENRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQIDPTSANFLIW 415
Query: 121 PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA 180
PPCVEVKRCTGCCNTSSVKCQPSR+HHRSVKVAKVEYVRKKPKLKEV VRLEEH+EC C
Sbjct: 416 PPCVEVKRCTGCCNTSSVKCQPSRIHHRSVKVAKVEYVRKKPKLKEVLVRLEEHMECTCT 595
Query: 181 TSNLNPDHREEET 193
++N N D+REEET
Sbjct: 596 STNTNSDYREEET 634
>dbj|AB031022.1|AB031022 Gallus gallus PDGF-A (L) mRNA for platelet-derived growth factor A
chain long form, complete cds
Length = 1290
Score = 308 bits (789), Expect = 1e-82
Identities = 149/193 (77%), Positives = 162/193 (83%)
Frame = +2
Query: 1 MRTWXXXXXXXXXXXXXXXXEEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE 60
MRTW EEAEIP+ELIERLA S+IHSIRDLQRLLEIDSVG +D E
Sbjct: 368 MRTWACVLLIGFGYLSFTSCEEAEIPQELIERLAHSEIHSIRDLQRLLEIDSVGYDDVSE 547
Query: 61 TSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIW 120
T+LR++ H+ HV E RPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQ+DPTSANFLIW
Sbjct: 548 TNLRSYSVHSAKHVQENRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQIDPTSANFLIW 727
Query: 121 PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA 180
PPCVEVKRCTGCCNTSSVKCQPSR+HHRSVKVAKVEYVRKKPKLKEV VRLEEH+EC C
Sbjct: 728 PPCVEVKRCTGCCNTSSVKCQPSRIHHRSVKVAKVEYVRKKPKLKEVLVRLEEHMECTCT 907
Query: 181 TSNLNPDHREEET 193
++N N D+REEET
Sbjct: 908 STNTNSDYREEET 946
>gb|AF188841.1|AF188841 Gallus gallus platelet-derived growth factor A-chain mRNA, complete
cds
Length = 807
Score = 306 bits (783), Expect = 7e-82
Identities = 148/193 (76%), Positives = 161/193 (82%)
Frame = +1
Query: 1 MRTWXXXXXXXXXXXXXXXXEEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE 60
MRTW EEAEIP+ELIERLA S+IHSIRDLQRLLEIDSVG +D E
Sbjct: 1 MRTWACVLLIGFGYLSLTSCEEAEIPQELIERLAHSEIHSIRDLQRLLEIDSVGYDDVSE 180
Query: 61 TSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIW 120
T+LR++ H+ HV E RPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQ+DPTSANFLIW
Sbjct: 181 TNLRSYSVHSAKHVQENRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQIDPTSANFLIW 360
Query: 121 PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA 180
PPCVEV RCTGCCNTSSVKCQPSR+HHRSVKVAKVEYVRKKPKLKEV VRLEEH+EC C
Sbjct: 361 PPCVEVTRCTGCCNTSSVKCQPSRIHHRSVKVAKVEYVRKKPKLKEVLVRLEEHMECTCT 540
Query: 181 TSNLNPDHREEET 193
++N N D+REEET
Sbjct: 541 STNTNSDYREEET 579
>dbj|D10106.1|RATPDGFA Rat mRNA for platelet-derived growth factor A chain
Length = 838
Score = 303 bits (775), Expect = 6e-81
Identities = 150/196 (76%), Positives = 158/196 (80%)
Frame = +1
Query: 1 MRTWXXXXXXXXXXXXXXXXEEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE 60
MRTW EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE
Sbjct: 46 MRTWACLLLLGCGYLAHALAEEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALE 225
Query: 61 TSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIW 120
T+LRAHGSH + HVPEKRPVPIRR+ + + P + ++ PTSANFLIW
Sbjct: 226 TNLRAHGSHTVKHVPEKRPVPIRRREVLRKPFPQFARPGRSFTRYLGARWTPTSANFLIW 405
Query: 121 PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA 180
PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA
Sbjct: 406 PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACA 585
Query: 181 TSNLNPDHREEETDVR 196
TSNLNPDHREEETDVR
Sbjct: 586 TSNLNPDHREEETDVR 633
>dbj|AB028637.1|AB028637 Mesocricetus auratus mRNA for PDGF A, partial cds
Length = 450
Score = 297 bits (760), Expect = 3e-79
Identities = 144/149 (96%), Positives = 144/149 (96%)
Frame = +3
Query: 42 RDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTV 101
RDLQRLLEIDSVGAEDALETSLRAH SHAI HVPEKRPVPIRRKRSIEEAIPAVCKTRTV
Sbjct: 3 RDLQRLLEIDSVGAEDALETSLRAHRSHAIKHVPEKRPVPIRRKRSIEEAIPAVCKTRTV 182
Query: 102 IYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKK 161
IYEIPRSQ DPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKK
Sbjct: 183 IYEIPRSQADPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKK 362
Query: 162 PKLKEVQVRLEEHLECACATSNLNPDHRE 190
PKLKEVQVRLEEHL C CATSNLNPDHRE
Sbjct: 363 PKLKEVQVRLEEHLGCTCATSNLNPDHRE 449
>gb|S57864.1|S57864 platelet-derived growth factor A-chain [rats, Fisher 344, vascular
smooth muscle cells, mRNA Partial, 561 nt]
Length = 561
Score = 285 bits (728), Expect = 2e-75
Identities = 135/139 (97%), Positives = 137/139 (98%)
Frame = +3
Query: 58 ALETSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANF 117
ALET+LRAHGSH + HVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANF
Sbjct: 3 ALETNLRAHGSHTVKHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANF 182
Query: 118 LIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLEC 177
LIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLEC
Sbjct: 183 LIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLEC 362
Query: 178 ACATSNLNPDHREEETDVR 196
ACATSNLNPDHREEETDVR
Sbjct: 363 ACATSNLNPDHREEETDVR 419
>gb|M23238.1|XELPDGFAA X.laevis platelet-derived growth factor A chain (PDGFA) mRNA,
complete cds, short form
Length = 1819
Score = 283 bits (724), Expect = 5e-75
Identities = 143/179 (79%), Positives = 156/179 (86%), Gaps = 3/179 (1%)
Frame = +2
Query: 21 EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGA-EDALETSLRA--HGSHAINHVPEK 77
EEAEIP+ELIERLA S+I SI DLQRLL+IDSVG EDA ++R+ H H VPEK
Sbjct: 482 EEAEIPQELIERLAHSEIRSISDLQRLLDIDSVGGGEDASAANIRSQKHDFHHNRLVPEK 661
Query: 78 RPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSS 137
R VP RRKRS+EEA+PA+CKTRTVIYEIPRSQ+DPTSANFLIWPPCVEVKRCTGCCNTSS
Sbjct: 662 RSVPSRRKRSVEEAVPAICKTRTVIYEIPRSQIDPTSANFLIWPPCVEVKRCTGCCNTSS 841
Query: 138 VKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPDHREEETDVR 196
VKCQPSR+HHRSVKVAKVEYVRKKPKLKEV VRLEEHLEC C T+N N D+REEETDVR
Sbjct: 842 VKCQPSRIHHRSVKVAKVEYVRKKPKLKEVLVRLEEHLECTC-TANSNSDYREEETDVR 1015
>emb|X17545.1|XLPDGFAC Xenopus mRNA for platelet-derived growth factor A-chain
Length = 881
Score = 277 bits (709), Expect = 3e-73
Identities = 140/176 (79%), Positives = 153/176 (86%), Gaps = 3/176 (1%)
Frame = +2
Query: 21 EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGA-EDALETSLRA--HGSHAINHVPEK 77
EEAEIP+ELIERLA S+I SI DLQRLL+IDSVG EDA ++R+ H H VPEK
Sbjct: 80 EEAEIPQELIERLAHSEIRSISDLQRLLDIDSVGGGEDASAANIRSQKHDFHHNRLVPEK 259
Query: 78 RPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSS 137
R VP RRKRS+EEA+PA+CKTRTVIYEIPRSQ+DPTSANFLIWPPCVEVKRCTGCCNTSS
Sbjct: 260 RSVPSRRKRSVEEAVPAICKTRTVIYEIPRSQIDPTSANFLIWPPCVEVKRCTGCCNTSS 439
Query: 138 VKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPDHREEET 193
VKCQPSR+HHRSVKVAKVEYVRKKPKLKEV VRLEEHLEC C T+N N D+REEET
Sbjct: 440 VKCQPSRIHHRSVKVAKVEYVRKKPKLKEVLVRLEEHLECTC-TANSNSDYREEET 604
>gb|M23237.1|XELPDGFA X.laevis platelet-derived growth factor A chain (PDGFA) mRNA,
complete cds, long form
Length = 1939
Score = 277 bits (709), Expect = 3e-73
Identities = 140/176 (79%), Positives = 153/176 (86%), Gaps = 3/176 (1%)
Frame = +2
Query: 21 EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGA-EDALETSLRA--HGSHAINHVPEK 77
EEAEIP+ELIERLA S+I SI DLQRLL+IDSVG EDA ++R+ H H VPEK
Sbjct: 482 EEAEIPQELIERLAHSEIRSISDLQRLLDIDSVGGGEDASAANIRSQKHDFHHNRLVPEK 661
Query: 78 RPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSS 137
R VP RRKRS+EEA+PA+CKTRTVIYEIPRSQ+DPTSANFLIWPPCVEVKRCTGCCNTSS
Sbjct: 662 RSVPSRRKRSVEEAVPAICKTRTVIYEIPRSQIDPTSANFLIWPPCVEVKRCTGCCNTSS 841
Query: 138 VKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPDHREEET 193
VKCQPSR+HHRSVKVAKVEYVRKKPKLKEV VRLEEHLEC C T+N N D+REEET
Sbjct: 842 VKCQPSRIHHRSVKVAKVEYVRKKPKLKEVLVRLEEHLECTC-TANSNSDYREEET 1006
>dbj|AK017169.1|AK017169 Mus musculus 11 days pregnant adult female ovary and uterus cDNA,
RIKEN full-length enriched library,
clone:5033413O18:platelet derived growth factor, alpha,
full insert sequence
Length = 1560
Score = 245 bits (626), Expect = 1e-63
Identities = 117/117 (100%), Positives = 117/117 (100%)
Frame = +2
Query: 80 VPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVK 139
VPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVK
Sbjct: 5 VPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVK 184
Query: 140 CQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPDHREEETDVR 196
CQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPDHREEETDVR
Sbjct: 185 CQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPDHREEETDVR 355
>gb|AF200950.1|AF200950 Danio rerio platelet-derived growth factor A chain mRNA, complete
cds
Length = 1486
Score = 221 bits (562), Expect = 3e-56
Identities = 112/177 (63%), Positives = 138/177 (77%), Gaps = 1/177 (0%)
Frame = +3
Query: 21 EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPV 80
EEA IPRELIERL+ S+IHSI DLQR+LE+D + E LE + H + + +
Sbjct: 477 EEAPIPRELIERLSNSEIHSISDLQRILEMDFLENE-VLEDVKQGHHKEHLYDSRNLKNL 653
Query: 81 PIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCV-EVKRCTGCCNTSSVK 139
RRKRSIEEA+PAVCKTRTVIYEIPRSQVDPT+ANFLIWPPC EV+RC+GCCNTS+++
Sbjct: 654 HSRRKRSIEEAVPAVCKTRTVIYEIPRSQVDPTAANFLIWPPCGGEVRRCSGCCNTSNMR 833
Query: 140 CQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPDHREEETDVR 196
C PS+ HHR+VKVAKVEYVR++PKL+EVQV+LE+HLEC C TS + + R D+R
Sbjct: 834 CHPSKKHHRNVKVAKVEYVRRRPKLREVQVQLEDHLECVC-TSRHHSESRIHTADIR 1001
>gb|M20491.1|HUMPDGA4 Human platelet-derived growth factor A-chain gene, exon 4
Length = 374
Score = 143 bits (361), Expect = 6e-33
Identities = 67/78 (85%), Positives = 72/78 (91%), Gaps = 1/78 (1%)
Frame = +3
Query: 77 KRPVPIRRKRSI-EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNT 135
+RPVP ++ EEA+PAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNT
Sbjct: 141 QRPVPAHCAPAVAEEAVPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNT 320
Query: 136 SSVKCQPSRVHHRSVKVA 153
SSVKCQPSRVHHRSVKV+
Sbjct: 321 SSVKCQPSRVHHRSVKVS 374
>emb|V01201.1|RESSV1 Simian sarcoma virus proviral sequence with genes coding for envelope
protein (env) and polymerase (pol)
Length = 5779
Score = 143 bits (361), Expect = 6e-33
Identities = 78/161 (48%), Positives = 101/161 (62%), Gaps = 6/161 (3%)
Frame = +3
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP EL + L+ I S DLQRLL+ DS G ED E L SH+ + R
Sbjct: 3819 IPEELYKMLSGHSIRSFDDLQRLLQGDS-GKEDGAELDLNMTRSHSGGELESLA----RG 3983
Query: 85 KRSI------EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSV 138
KRS+ E A+ A CKTRT ++EI R +D T+ANFL+WPPCVEV+RC+GCCN +V
Sbjct: 3984 KRSLGSLSVAEPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNV 4163
Query: 139 KCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECAC 179
+C+P++V R V+V K+E VRKKP K+ V LE+HL C C
Sbjct: 4164 QCRPTQVQLRPVQVRKIEIVRKKPIFKKATVTLEDHLACKC 4286
>gb|M19986.1|HUMPDGFA4 Human platelet-derived growth factor (PDGFA) A chain gene, exon 4
Length = 250
Score = 143 bits (360), Expect = 8e-33
Identities = 67/77 (87%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
Frame = +2
Query: 78 RPVPIRRKRSI-EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTS 136
RPVP ++ EEA+PAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTS
Sbjct: 2 RPVPAHCAPAVAEEAVPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTS 181
Query: 137 SVKCQPSRVHHRSVKVA 153
SVKCQPSRVHHRSVKV+
Sbjct: 182 SVKCQPSRVHHRSVKVS 232
>emb|X83705.1|HSRNASIS H.sapiens mRNA for c-sis proto-oncogene
Length = 593
Score = 142 bits (359), Expect = 1e-32
Identities = 78/163 (47%), Positives = 100/163 (60%), Gaps = 6/163 (3%)
Frame = +2
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP EL E L+ I S DLQRLL D G ED E L SH+ + R
Sbjct: 65 IPEELYEMLSDHSIRSFDDLQRLLHGDP-GEEDGAELDLNMTRSHSGGELESLA----RG 229
Query: 85 KRSI------EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSV 138
+RS+ E A+ A CKTRT ++EI R +D T+ANFL+WPPCVEV+RC+GCCN +V
Sbjct: 230 RRSLGSLTIAEPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNV 409
Query: 139 KCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
+C+P++V R V+V K+E VRKKP K+ V LE+HL C C T
Sbjct: 410 QCRPTQVQLRPVQVRKIEIVRKKPIFKKATVTLEDHLACKCET 538
>emb|X02811.1|HSPDGFB Human mRNA for platelet-derived growth factor B chain (PDGF-B)
Length = 2137
Score = 142 bits (359), Expect = 1e-32
Identities = 78/163 (47%), Positives = 100/163 (60%), Gaps = 6/163 (3%)
Frame = +2
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP EL E L+ I S DLQRLL D G ED E L SH+ + R
Sbjct: 1055 IPEELYEMLSDHSIRSFDDLQRLLHGDP-GEEDGAELDLNMTRSHSGGELESLA----RG 1219
Query: 85 KRSI------EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSV 138
+RS+ E A+ A CKTRT ++EI R +D T+ANFL+WPPCVEV+RC+GCCN +V
Sbjct: 1220 RRSLGSLTIAEPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNV 1399
Query: 139 KCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
+C+P++V R V+V K+E VRKKP K+ V LE+HL C C T
Sbjct: 1400 QCRPTQVQLRPVQVRKIEIVRKKPIFKKATVTLEDHLACKCET 1528
>ref|NM_033016.1| Homo sapiens platelet-derived growth factor beta polypeptide
(simian sarcoma viral (v-sis) oncogene homolog) (PDGFB),
transcript variant 2, mRNA
Length = 2378
Score = 142 bits (359), Expect = 1e-32
Identities = 78/163 (47%), Positives = 100/163 (60%), Gaps = 6/163 (3%)
Frame = +1
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP EL E L+ I S DLQRLL D G ED E L SH+ + R
Sbjct: 100 IPEELYEMLSDHSIRSFDDLQRLLHGDP-GEEDGAELDLNMTRSHSGGELESLA----RG 264
Query: 85 KRSI------EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSV 138
+RS+ E A+ A CKTRT ++EI R +D T+ANFL+WPPCVEV+RC+GCCN +V
Sbjct: 265 RRSLGSLTIAEPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNV 444
Query: 139 KCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
+C+P++V R V+V K+E VRKKP K+ V LE+HL C C T
Sbjct: 445 QCRPTQVQLRPVQVRKIEIVRKKPIFKKATVTLEDHLACKCET 573
>gb|M12783.1|HUMSISPDG Human c-sis/platelet-derived growth factor 2 (SIS/PDGF2) mRNA,
complete cds
Length = 3798
Score = 142 bits (359), Expect = 1e-32
Identities = 78/163 (47%), Positives = 100/163 (60%), Gaps = 6/163 (3%)
Frame = +1
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP EL E L+ I S DLQRLL D G ED E L SH+ + R
Sbjct: 1165 IPEELYEMLSDHSIRSFDDLQRLLHGDP-GEEDGAELDLNMTRSHSGGELESLA----RG 1329
Query: 85 KRSI------EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSV 138
+RS+ E A+ A CKTRT ++EI R +D T+ANFL+WPPCVEV+RC+GCCN +V
Sbjct: 1330 RRSLGSLTIAEPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNV 1509
Query: 139 KCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
+C+P++V R V+V K+E VRKKP K+ V LE+HL C C T
Sbjct: 1510 QCRPTQVQLRPVQVRKIEIVRKKPIFKKATVTLEDHLACKCET 1638
>ref|NM_002608.1| Homo sapiens platelet-derived growth factor beta polypeptide (simian
sarcoma viral (v-sis) oncogene homolog) (PDGFB),
transcript variant 1, mRNA
Length = 3373
Score = 142 bits (359), Expect = 1e-32
Identities = 78/163 (47%), Positives = 100/163 (60%), Gaps = 6/163 (3%)
Frame = +3
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP EL E L+ I S DLQRLL D G ED E L SH+ + R
Sbjct: 1095 IPEELYEMLSDHSIRSFDDLQRLLHGDP-GEEDGAELDLNMTRSHSGGELESLA----RG 1259
Query: 85 KRSI------EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSV 138
+RS+ E A+ A CKTRT ++EI R +D T+ANFL+WPPCVEV+RC+GCCN +V
Sbjct: 1260 RRSLGSLTIAEPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNV 1439
Query: 139 KCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
+C+P++V R V+V K+E VRKKP K+ V LE+HL C C T
Sbjct: 1440 QCRPTQVQLRPVQVRKIEIVRKKPIFKKATVTLEDHLACKCET 1568
>emb|X02744.1|HSCSIST Human mRNA for c-sis gene (clone pSM-1)
Length = 2498
Score = 142 bits (359), Expect = 1e-32
Identities = 78/163 (47%), Positives = 100/163 (60%), Gaps = 6/163 (3%)
Frame = +1
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP EL E L+ I S DLQRLL D G ED E L SH+ + R
Sbjct: 190 IPEELYEMLSDHSIRSFDDLQRLLHGDP-GEEDGAELDLNMTRSHSGGELESLA----RG 354
Query: 85 KRSI------EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSV 138
+RS+ E A+ A CKTRT ++EI R +D T+ANFL+WPPCVEV+RC+GCCN +V
Sbjct: 355 RRSLGSLTIAEPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNV 534
Query: 139 KCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
+C+P++V R V+V K+E VRKKP K+ V LE+HL C C T
Sbjct: 535 QCRPTQVQLRPVQVRKIEIVRKKPIFKKATVTLEDHLACKCET 663
>ref|XM_009997.2| Homo sapiens platelet-derived growth factor beta polypeptide (simian
sarcoma viral (v-sis) oncogene homolog) (PDGFB), mRNA
Length = 3801
Score = 142 bits (359), Expect = 1e-32
Identities = 78/163 (47%), Positives = 100/163 (60%), Gaps = 6/163 (3%)
Frame = +1
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP EL E L+ I S DLQRLL D G ED E L SH+ + R
Sbjct: 1165 IPEELYEMLSDHSIRSFDDLQRLLHGDP-GEEDGAELDLNMTRSHSGGELESLA----RG 1329
Query: 85 KRSI------EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSV 138
+RS+ E A+ A CKTRT ++EI R +D T+ANFL+WPPCVEV+RC+GCCN +V
Sbjct: 1330 RRSLGSLTIAEPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNV 1509
Query: 139 KCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
+C+P++V R V+V K+E VRKKP K+ V LE+HL C C T
Sbjct: 1510 QCRPTQVQLRPVQVRKIEIVRKKPIFKKATVTLEDHLACKCET 1638
>dbj|AB031025.1|AB031025 Gallus gallus PDGF-B mRNA for platelet-derived growth factor B
chain, complete cds
Length = 1083
Score = 142 bits (357), Expect = 2e-32
Identities = 74/169 (43%), Positives = 105/169 (61%), Gaps = 7/169 (4%)
Frame = +3
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP ++ E L S + SI DLQR L IDSV ED+ L A P + V + R
Sbjct: 171 IPEDIYEILGGSSVRSISDLQRALRIDSV-EEDSSSLDLNATQ-------PSQNHVSLSR 326
Query: 85 KR-------SIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSS 137
+R + E A+ A CKTRTV++EI R VD T+ANF++WPPCVEV+RC+GCCN +
Sbjct: 327 ERRSLDALAAAEPAVLAECKTRTVVFEISRDMVDSTNANFVVWPPCVEVQRCSGCCNNRN 506
Query: 138 VKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNP 186
V+C+P ++ R V+V K+E+ ++KP K+V V LE+H++C C + P
Sbjct: 507 VQCRPMQIRVRHVQVNKIEFFQRKPIFKKVIVPLEDHVQCRCEVVSRPP 653
>gb|AF162784.1|AF162784 Mus musculus platelet-derived growth factor beta chain (Pdgfb)
mRNA, complete cds
Length = 726
Score = 141 bits (356), Expect = 2e-32
Identities = 77/163 (47%), Positives = 101/163 (61%), Gaps = 6/163 (3%)
Frame = +1
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP EL E L+ I S DLQRLL DSV ED E L +H+ + R
Sbjct: 73 IPEELYEMLSDHSIRSFDDLQRLLHRDSVD-EDGAELDLNMTRAHSGVELESSS----RG 237
Query: 85 KRSI------EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSV 138
+RS+ E A+ A CKTRT +++I R+ +D T+ANFL+WPPCVEV+RC+GCCN +V
Sbjct: 238 RRSLGSLAAAEPAVIAECKTRTEVFQISRNLIDRTNANFLVWPPCVEVQRCSGCCNNRNV 417
Query: 139 KCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
+C+ S+V R V+V K+E VRKKP K+ V LE+HL C C T
Sbjct: 418 QCRASQVQMRPVQVRKIEIVRKKPIFKKATVTLEDHLACKCET 546
>ref|NM_011057.1| Mus musculus platelet derived growth factor, B polypeptide (Pdgfb),
mRNA
Length = 2404
Score = 141 bits (356), Expect = 2e-32
Identities = 77/163 (47%), Positives = 101/163 (61%), Gaps = 6/163 (3%)
Frame = +2
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP EL E L+ I S DLQRLL DSV ED E L +H+ + R
Sbjct: 1049 IPEELYEMLSDHSIRSFDDLQRLLHRDSVD-EDGAELDLNMTRAHSGVELESSS----RG 1213
Query: 85 KRSI------EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSV 138
+RS+ E A+ A CKTRT +++I R+ +D T+ANFL+WPPCVEV+RC+GCCN +V
Sbjct: 1214 RRSLGSLAAAEPAVIAECKTRTEVFQISRNLIDRTNANFLVWPPCVEVQRCSGCCNNRNV 1393
Query: 139 KCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
+C+ S+V R V+V K+E VRKKP K+ V LE+HL C C T
Sbjct: 1394 QCRASQVQMRPVQVRKIEIVRKKPIFKKATVTLEDHLACKCET 1522
>emb|X03702.1|HSPDGFB1 Human osteosarcoma cell line U-2 OS mRNA fragment for PDGF-B chain
(PDGF= platelet-derived growth factor)
Length = 1758
Score = 141 bits (355), Expect = 3e-32
Identities = 77/162 (47%), Positives = 99/162 (60%), Gaps = 6/162 (3%)
Frame = +1
Query: 26 PRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRRK 85
P EL E L+ I S DLQRLL D G ED E L SH+ + R +
Sbjct: 1 PEELYEMLSDHSIRSFDDLQRLLHGDP-GEEDGAELDLNMTRSHSGGELESLA----RGR 165
Query: 86 RSI------EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVK 139
RS+ E A+ A CKTRT ++EI R +D T+ANFL+WPPCVEV+RC+GCCN +V+
Sbjct: 166 RSLGSLTIAEPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQ 345
Query: 140 CQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
C+P++V R V+V K+E VRKKP K+ V LE+HL C C T
Sbjct: 346 CRPTQVQLRPVQVRKIEIVRKKPIFKKATVTLEDHLACKCET 471
>emb|Z14117.1|RNPDGFBCP R.norvegicus mRNA for platelet-derived growth factor B chain
precursor (partial)
Length = 675
Score = 141 bits (355), Expect = 3e-32
Identities = 77/163 (47%), Positives = 101/163 (61%), Gaps = 6/163 (3%)
Frame = +1
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP EL E L+ I S DLQRLL DSV ED E L +H+ + R
Sbjct: 49 IPEELYEMLSDHSIRSFDDLQRLLHRDSVD-EDGAELDLNMTRAHS----GVESESSSRG 213
Query: 85 KRSI------EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSV 138
+RS+ E A+ A CKTRT +++I R+ +D T+ANFL+WPPCVEV+RC+GCCN +V
Sbjct: 214 RRSLGSLAAAEPAVIAECKTRTEVFQISRNLIDRTNANFLVWPPCVEVQRCSGCCNNRNV 393
Query: 139 KCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
+C+ S+V R V+V K+E VRKKP K+ V LE+HL C C T
Sbjct: 394 QCRASQVQMRPVQVRKIEIVRKKPVFKKATVTLEDHLACKCET 522
>gb|S66871.1|S66868S4 platelet-derived growth factor A-chain [mice, Balb/c, Genomic, 231
nt, segment 4 of 7]
Length = 231
Score = 140 bits (352), Expect = 7e-32
Identities = 63/65 (96%), Positives = 65/65 (99%)
Frame = +2
Query: 89 EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHR 148
EEA+PAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHR
Sbjct: 20 EEAVPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHR 199
Query: 149 SVKVA 153
SVKV+
Sbjct: 200 SVKVS 214
>emb|X05112.1|FSSISMSG Feline mRNA for c-sis proto-oncogene for PDGF beta PDGF =
platelet-derived growth factor
Length = 3425
Score = 139 bits (350), Expect = 1e-31
Identities = 76/167 (45%), Positives = 101/167 (59%), Gaps = 10/167 (5%)
Frame = +2
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP EL + L+ I S DLQRLL DSV ED E L + SH + R
Sbjct: 1115 IPEELYKMLSDHSIRSFDDLQRLLHGDSVD-EDRAELDLNSTRSHCGGELESLS----RG 1279
Query: 85 KRSI----------EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCN 134
+RS+ E A+ A CKTRT ++E+ R +D T+ANFL+WPPCVEV+RC+GCCN
Sbjct: 1280 RRSLGEAAGSPTVAEPAMIAECKTRTEVFEVSRRLIDRTNANFLVWPPCVEVQRCSGCCN 1459
Query: 135 TSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
+V+C+P++V R V+V K+E VRK+P K+ V LE+HL C C T
Sbjct: 1460 NRNVQCRPTQVQLRLVQVRKIEIVRKRPVFKKATVTLEDHLACKCET 1600
>emb|X97123.1|OZRNAPDGF O.aries mRNA for platelet-derived growth factor
Length = 726
Score = 137 bits (344), Expect = 6e-31
Identities = 76/163 (46%), Positives = 98/163 (59%), Gaps = 6/163 (3%)
Frame = +1
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP EL E L+ I S DLQRLL DS+ ED E L SH+ + R
Sbjct: 73 IPEELYEMLSDHSIRSFDDLQRLLHGDSLD-EDGAELDLNLTRSHSGGELESLS----RG 237
Query: 85 KRSI------EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSV 138
+RS+ E A+ A CKTRT + EI R +D T+ANFL+WPPCVEV+RC+GCCN +V
Sbjct: 238 RRSLGSPTVAEPAVIAECKTRTEVSEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNV 417
Query: 139 KCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
+C+P++V R V+V K+E VRKK K+ V L +HL C C T
Sbjct: 418 QCRPTQVQDRKVQVKKIEIVRKKKIFKKATVTLVDHLACRCET 546
>dbj|AB028638.1|AB028638 Mesocricetus auratus mRNA for PDGF B, partial cds
Length = 477
Score = 132 bits (333), Expect = 1e-29
Identities = 74/153 (48%), Positives = 96/153 (62%), Gaps = 3/153 (1%)
Frame = +1
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP EL E L+ I S DLQRLL DSV E+ E L +H+ PE R
Sbjct: 25 IPEELYEMLSDHSIRSFDDLQRLLHGDSVD-ENGAELDLNMTQAHS-GGKPESSSRGRRS 198
Query: 85 KRSIEEAIPAV---CKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQ 141
S+ A PAV CKTRT +++I R+ +D T+ANFL+WPPCVEV+RC+GCCN +V+C+
Sbjct: 199 LGSLAAAEPAVIAECKTRTEVFQISRNLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCR 378
Query: 142 PSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEH 174
S+V R V+V K+E VRKKP K+ V LE+H
Sbjct: 379 ASQVQMRPVQVRKIEIVRKKPVFKKATVTLEDH 477
>gb|L41623.1|RATRATC Rattus rattus (clone Rc-sis) pdgf protein (c-sis) gene, partial cds
Length = 549
Score = 124 bits (312), Expect = 3e-27
Identities = 71/160 (44%), Positives = 91/160 (56%), Gaps = 3/160 (1%)
Frame = +2
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSL---RAHGSHAINHVPEKRPVP 81
IP EL E L+ I S DLQRLL DSV ED E L RAH + R
Sbjct: 20 IPEELYEMLSDHSIRSFDDLQRLLHRDSVD-EDGAELDLNMTRAHSGVESESLTRGRR-S 193
Query: 82 IRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQ 141
+ + E A+ A CKT T +++I R+ +D T+ANFL+WPPCVEV+RC+GCCN +V+C+
Sbjct: 194 LGSLAAAEPAVIAECKTSTEVFQISRNLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCR 373
Query: 142 PSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
K+E VRKKP K+ V LE+HL C C T
Sbjct: 374 VLAGADAEGAGEKIEIVRKKPVFKKATVTLEDHLACKCET 493
>emb|X63966.1|HSPDGFBB H.sapiens synthetic gene for platelet-derived growth factor-BB
Length = 514
Score = 121 bits (303), Expect = 3e-26
Identities = 53/93 (56%), Positives = 70/93 (74%)
Frame = +2
Query: 89 EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHR 148
E A+ A CKTRT ++EI R +D T+ANFL+WPPCVEV+RC+GCCN +V+C+P++V R
Sbjct: 41 EPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCRPTQVQLR 220
Query: 149 SVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
V+V K+E VRKKP K+ V LE+HL C C T
Sbjct: 221 PVQVRKIEIVRKKPIFKKATVTLEDHLACKCET 319
>gb|L40991.1|RATPDGF Rattus norvegicus (clone 3-4a) growth factor PDGF-B mRNA, partial
cds
Length = 327
Score = 120 bits (301), Expect = 6e-26
Identities = 52/93 (55%), Positives = 70/93 (74%)
Frame = +1
Query: 89 EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHR 148
E A+ A CKTRT +++I R+ +D T+ANFL+WPPCVEV+RC+GCCN +V+C+ S+V R
Sbjct: 25 EPAVIAECKTRTEVFQISRNLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCRASQVQMR 204
Query: 149 SVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
V+V K+E VRKKP K+ V LE+HL C C T
Sbjct: 205 PVQVRKIEIVRKKPVFKKATVTLEDHLACKCET 303
>emb|Z81010.2|HSN10C3 Human DNA sequence from clone LL22NC03-10C3 on chromosome 22 Contains
the PDGFB gene for platelet-derived growth factor beta
polypeptide (simian sarcoma viral (v-sis) oncogene
homolog), ESTs, STSs, GSSs and a putative CpG island,
complete sequence [Hom>
Length = 38115
Score = 90.1 bits (222), Expect = 8e-17
Identities = 41/79 (51%), Positives = 58/79 (72%)
Frame = +3
Query: 89 EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHR 148
E A+ A CKTRT ++EI R +D T+ANFL+WPPCVEV+RC+GCCN +V+C+P++V R
Sbjct: 18738 EPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCRPTQVQLR 18917
Query: 149 SVKVAKVEYVRKKPKLKEV 167
V+V + +R P+L V
Sbjct: 18918 PVQVRR---LRGPPRLVPV 18965
Score = 41.2 bits (95), Expect = 0.044
Identities = 21/58 (36%), Positives = 29/58 (49%)
Frame = +1
Query: 124 VEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
+ R GC ++ C ++V K+E VRKKP K+ V LE+HL C C T
Sbjct: 20254 IRASRAPGCVVSTEAFCGSV------LQVRKIEIVRKKPIFKKATVTLEDHLACKCET 20409
>emb|X06300.1|FSSISG4 F.silvestris c-sis proto-oncogene exon 4 and flanks
Length = 246
Score = 89.7 bits (221), Expect = 1e-16
Identities = 38/74 (51%), Positives = 54/74 (72%)
Frame = +2
Query: 79 PVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSV 138
P+P E A+ A CKTRT ++E+ R +D T+ANFL+WPPCVEV+RC+GCCN +V
Sbjct: 8 PLPSGSPTVAEPAMIAECKTRTEVFEVSRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNV 187
Query: 139 KCQPSRVHHRSVKV 152
+C+P++V R V+V
Sbjct: 188 QCRPTQVQLRLVQV 229
>gb|M25356.1|CATSIS4 Feline c-sis proto-oncogene, segment 4
Length = 246
Score = 89.7 bits (221), Expect = 1e-16
Identities = 38/74 (51%), Positives = 54/74 (72%)
Frame = +2
Query: 79 PVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSV 138
P+P E A+ A CKTRT ++E+ R +D T+ANFL+WPPCVEV+RC+GCCN +V
Sbjct: 8 PLPSGSPTVAEPAMIAECKTRTEVFEVSRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNV 187
Query: 139 KCQPSRVHHRSVKV 152
+C+P++V R V+V
Sbjct: 188 QCRPTQVQLRLVQV 229
>gb|K01399.1|HUMSISA4 Human c-sis proto-oncogene for platelet-derived growth factor, exon
4 and flanks
Length = 236
Score = 89.4 bits (220), Expect = 1e-16
Identities = 37/67 (55%), Positives = 53/67 (78%)
Frame = +3
Query: 89 EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHR 148
E A+ A CKTRT ++EI R +D T+ANFL+WPPCVEV+RC+GCCN +V+C+P++V R
Sbjct: 33 EPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCRPTQVQLR 212
Query: 149 SVKVAKV 155
V+V ++
Sbjct: 213 PVQVRRL 233
>gb|K01915.1|HUMSIS3 Human platelet-derived growth factor (c-sis; PDGF2) oncogene, exon
4
Length = 234
Score = 89.0 bits (219), Expect = 2e-16
Identities = 37/66 (56%), Positives = 52/66 (78%)
Frame = +1
Query: 89 EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHR 148
E A+ A CKTRT ++EI R +D T+ANFL+WPPCVEV+RC+GCCN +V+C+P++V R
Sbjct: 37 EPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCRPTQVQLR 216
Query: 149 SVKVAK 154
V+V +
Sbjct: 217 PVQVRR 234
>emb|X00560.1|HSSISB3 Human proto-oncogene c-sis fragment for PDGF B chain precursor
(platelet-derived growth factor)
Length = 218
Score = 88.6 bits (218), Expect = 2e-16
Identities = 37/64 (57%), Positives = 51/64 (78%)
Frame = +3
Query: 89 EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHR 148
E A+ A CKTRT ++EI R +D T+ANFL+WPPCVEV+RC+GCCN +V+C+P++V R
Sbjct: 24 EPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCRPTQVQLR 203
Query: 149 SVKV 152
V+V
Sbjct: 204 PVQV 215
>gb|S66872.1|S66868S5 platelet-derived growth factor A-chain [mice, Balb/c, Genomic, 172
nt, segment 5 of 7]
Length = 172
Score = 86.3 bits (212), Expect = 1e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 151 KVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPDHREEET 193
+VAKVEYVRKKPKLKEVQVRLEE LECACATSNLNPDHREEET
Sbjct: 23 QVAKVEYVRKKPKLKEVQVRLEEDLECACATSNLNPDHREEET 151
>gb|M84451.1|MUSSIS04 Mus musculus platelet-derived growth factor beta-chain (sis), exon
4
Length = 223
Score = 85.9 bits (211), Expect = 2e-15
Identities = 35/63 (55%), Positives = 50/63 (78%)
Frame = +3
Query: 89 EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHR 148
E A+ A CKTRT +++I R+ +D T+ANFL+WPPCVEV+RC+GCCN +V+C+ S+V R
Sbjct: 33 EPAVIAECKTRTEVFQISRNLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCRASQVQMR 212
Query: 149 SVK 151
V+
Sbjct: 213 PVQ 221
>gb|M64847.1|MUSCSIS04 Mouse platelet-derived growth factor B chain (c-sis) gene, exon 4
Length = 223
Score = 85.9 bits (211), Expect = 2e-15
Identities = 35/63 (55%), Positives = 50/63 (78%)
Frame = +3
Query: 89 EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHR 148
E A+ A CKTRT +++I R+ +D T+ANFL+WPPCVEV+RC+GCCN +V+C+ S+V R
Sbjct: 33 EPAVIAECKTRTEVFQISRNLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCRASQVQMR 212
Query: 149 SVK 151
V+
Sbjct: 213 PVQ 221
>gb|M83575.1|HUMPDGFAB Human platelet-derived growth factor A chain (PDGFA) gene, exons
only
Length = 5133
Score = 83.2 bits (204), Expect = 1e-14
Identities = 38/43 (88%), Positives = 43/43 (99%)
Frame = +2
Query: 151 KVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPDHREEET 193
+VAKVEYVRKKPKLKEVQVRLEEHLECACAT++LNPD+REE+T
Sbjct: 47 QVAKVEYVRKKPKLKEVQVRLEEHLECACATTSLNPDYREEDT 175
>gb|M19987.1|HUMPDGFA5 Human platelet-derived growth factor (PDGFA) A chain gene, exon 5
Length = 257
Score = 83.2 bits (204), Expect = 1e-14
Identities = 38/43 (88%), Positives = 43/43 (99%)
Frame = +2
Query: 151 KVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPDHREEET 193
+VAKVEYVRKKPKLKEVQVRLEEHLECACAT++LNPD+REE+T
Sbjct: 47 QVAKVEYVRKKPKLKEVQVRLEEHLECACATTSLNPDYREEDT 175
>gb|M20492.1|HUMPDGA5 Human platelet-derived growth factor A-chain gene, exon 5
Length = 482
Score = 83.2 bits (204), Expect = 1e-14
Identities = 38/43 (88%), Positives = 43/43 (99%)
Frame = +3
Query: 151 KVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPDHREEET 193
+VAKVEYVRKKPKLKEVQVRLEEHLECACAT++LNPD+REE+T
Sbjct: 180 QVAKVEYVRKKPKLKEVQVRLEEHLECACATTSLNPDYREEDT 308
>emb|Y15920.1|HSY15920 Homo sapiens mRNA for chimaeric transcript of collagen type 1 alpha
1 and platelet derived growth factor beta, 464 bp
Length = 464
Score = 80.1 bits (196), Expect = 9e-14
Identities = 50/110 (45%), Positives = 62/110 (55%), Gaps = 6/110 (5%)
Frame = +3
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP EL E L+ I S DLQRLL D G ED E L SH+ + R
Sbjct: 150 IPEELYEMLSDHSIRSFDDLQRLLHGDP-GEEDGAELDLNMTRSHSGGELESLA----RG 314
Query: 85 KRSI------EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKR 128
+RS+ E A+ A CKTRT ++EI R +D T+ANFL+WPPCVEV+R
Sbjct: 315 RRSLGSLTIAEPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQR 464
>emb|Y08643.1|HSCOLPCHT H.sapiens mRNA for COL1A1 and PDGFB chimaeric transcript
Length = 464
Score = 80.1 bits (196), Expect = 9e-14
Identities = 50/110 (45%), Positives = 62/110 (55%), Gaps = 6/110 (5%)
Frame = +3
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP EL E L+ I S DLQRLL D G ED E L SH+ + R
Sbjct: 150 IPEELYEMLSDHSIRSFDDLQRLLHGDP-GEEDGAELDLNMTRSHSGGELESLA----RG 314
Query: 85 KRSI------EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKR 128
+RS+ E A+ A CKTRT ++EI R +D T+ANFL+WPPCVEV+R
Sbjct: 315 RRSLGSLTIAEPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQR 464
>emb|Y15921.1|HSY15921 Homo sapiens mRNA for chimaeric transcript of collagen type 1 alpha
1 and platelet derived growth factor beta, 431 bp
Length = 431
Score = 78.2 bits (191), Expect = 3e-13
Identities = 49/109 (44%), Positives = 61/109 (55%), Gaps = 6/109 (5%)
Frame = +1
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP EL E L+ I S DLQRLL D G ED E L SH+ + R
Sbjct: 118 IPEELYEMLSDHSIRSFDDLQRLLHGDP-GEEDGAELDLNMTRSHSGGELESLA----RG 282
Query: 85 KRSI------EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVK 127
+RS+ E A+ A CKTRT ++EI R +D T+ANFL+WPPCVEV+
Sbjct: 283 RRSLGSLTIAEPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQ 429
>gb|S66870.1|S66868S3 platelet-derived growth factor A-chain [mice, Balb/c, Genomic,
142 nt, segment 3 of 7]
Length = 142
Score = 75.1 bits (183), Expect = 3e-12
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +2
Query: 54 GAEDALETSLRAHGSHAINHVPEKRPVPIRRKRSIEE 90
GAEDALETSLRAHGSHAINHVPEKRPVPIRRKRSI E
Sbjct: 20 GAEDALETSLRAHGSHAINHVPEKRPVPIRRKRSIGE 130
>gb|J02396.1|SEG_SSVPCS2 Simian sarcoma virus v-sis transforming protein p28 gene, complete
cds; and 3' LTR long terminal repeat, complete sequence
Length = 2337
Score = 68.9 bits (167), Expect = 2e-10
Identities = 61/167 (36%), Positives = 76/167 (44%), Gaps = 12/167 (7%)
Frame = +1
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRR 84
IP EL + L+ I S DLQRLL+ DS G ED E L SH+ + R
Sbjct: 379 IPEELYKMLSGHSIRSFDDLQRLLQGDS-GKEDGAELDLNMTRSHSGGELESLA----RG 543
Query: 85 KRSI------EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSV 138
KRS+ E A+ A CKTRT ++EI + A+ P V G +
Sbjct: 544 KRSLGSLSVAEPAMIAECKTRTEVFEI-------SGASSTAPMPTSGVAALRGGAALLRL 702
Query: 139 KCQPSRV--HHRSVKVA----KVEYVRKKPKLKEVQVRLEEHLECAC 179
QP R H S A K+E VRKKP K+ V LE+HL C C
Sbjct: 703 LQQPQRAVPAHPSAAAASPVRKIEIVRKKPIFKKATVTLEDHLACKC 843
>gb|S66869.1|S66868S2 platelet-derived growth factor A-chain [mice, Balb/c, Genomic,
137 nt, segment 2 of 7]
Length = 137
Score = 65.9 bits (159), Expect = 2e-09
Identities = 33/34 (97%), Positives = 34/34 (99%)
Frame = +3
Query: 21 EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVG 54
+EAEIPRELIERLARSQIHSIRDLQRLLEIDSVG
Sbjct: 18 QEAEIPRELIERLARSQIHSIRDLQRLLEIDSVG 119
>gb|S62078.1|S62078 platelet-derived growth factor A-chain {5' region} [human, Genomic,
3889 nt]
Length = 3889
Score = 64.7 bits (156), Expect = 4e-09
Identities = 32/34 (94%), Positives = 34/34 (99%)
Frame = +3
Query: 21 EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVG 54
+EAEIPRE+IERLARSQIHSIRDLQRLLEIDSVG
Sbjct: 3273 QEAEIPREVIERLARSQIHSIRDLQRLLEIDSVG 3374
>gb|M20489.1|HUMPDGA2 Human platelet-derived growth factor A-chain gene, exon 2
Length = 151
Score = 64.7 bits (156), Expect = 4e-09
Identities = 32/34 (94%), Positives = 34/34 (99%)
Frame = +1
Query: 21 EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVG 54
+EAEIPRE+IERLARSQIHSIRDLQRLLEIDSVG
Sbjct: 22 QEAEIPREVIERLARSQIHSIRDLQRLLEIDSVG 123
>emb|AJ401391.1|DME401391 Drosophila melanogaster mRNA for PDGF/VEGF factor-1 (Pvf1 gene)
Length = 1762
Score = 64.7 bits (156), Expect = 4e-09
Identities = 28/95 (29%), Positives = 46/95 (47%)
Frame = +1
Query: 85 KRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSR 144
K ++ A PA C + I E+ D AN+ P C + RC GCC ++ + CQP+
Sbjct: 604 KSTVRNATPASCSPQPTIVELKPPAED--EANYYYMPACTRISRCNGCCGSTLISCQPTE 777
Query: 145 VHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECAC 179
V ++V KV+ + + +E+H +C C
Sbjct: 778 VEQVQLRVRKVDRAATSGRRPFTIITVEQHTQCRC 882
>ref|NM_078683.1| Drosophila melanogaster PDGF- and VEGF-related factor 1 (Pvf1),
mRNA
Length = 1893
Score = 64.7 bits (156), Expect = 4e-09
Identities = 28/95 (29%), Positives = 46/95 (47%)
Frame = +3
Query: 85 KRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSR 144
K ++ A PA C + I E+ D AN+ P C + RC GCC ++ + CQP+
Sbjct: 696 KSTVRNATPASCSPQPTIVELKPPAED--EANYYYMPACTRISRCNGCCGSTLISCQPTE 869
Query: 145 VHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECAC 179
V ++V KV+ + + +E+H +C C
Sbjct: 870 VEQVQLRVRKVDRAATSGRRPFTIITVEQHTQCRC 974
>gb|AY051751.1| Drosophila melanogaster LD28763 full length cDNA
Length = 1893
Score = 64.7 bits (156), Expect = 4e-09
Identities = 28/95 (29%), Positives = 46/95 (47%)
Frame = +3
Query: 85 KRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSR 144
K ++ A PA C + I E+ D AN+ P C + RC GCC ++ + CQP+
Sbjct: 696 KSTVRNATPASCSPQPTIVELKPPAED--EANYYYMPACTRISRCNGCCGSTLISCQPTE 869
Query: 145 VHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECAC 179
V ++V KV+ + + +E+H +C C
Sbjct: 870 VEQVQLRVRKVDRAATSGRRPFTIITVEQHTQCRC 974
>gb|M19984.1|HUMPDGFA2 Human platelet-derived growth factor (PDGFA) A chain gene, exon 2
Length = 176
Score = 64.7 bits (156), Expect = 4e-09
Identities = 32/34 (94%), Positives = 34/34 (99%)
Frame = +1
Query: 21 EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVG 54
+EAEIPRE+IERLARSQIHSIRDLQRLLEIDSVG
Sbjct: 34 QEAEIPREVIERLARSQIHSIRDLQRLLEIDSVG 135
>emb|AJ238420.1|HSA238420 Homo sapiens PDGFA gene for platelet-derived growth factor A chain,
exons 1 to 4
Length = 8005
Score = 64.7 bits (156), Expect = 4e-09
Identities = 32/34 (94%), Positives = 34/34 (99%)
Frame = +1
Query: 21 EEAEIPRELIERLARSQIHSIRDLQRLLEIDSVG 54
+EAEIPRE+IERLARSQIHSIRDLQRLLEIDSVG
Sbjct: 1474 QEAEIPREVIERLARSQIHSIRDLQRLLEIDSVG 1575
Score = 64.3 bits (155), Expect = 5e-09
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +2
Query: 54 GAEDALETSLRAHGSHAINHVPEKRPVPIRRKRSIEEA 91
G+ED+L+TSLRAHG HA HVPEKRP+PIRRKRSI E+
Sbjct: 6494 GSEDSLDTSLRAHGVHATKHVPEKRPLPIRRKRSIGES 6607
Score = 52.8 bits (125), Expect = 1e-05
Identities = 26/36 (72%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Frame = +2
Query: 77 KRPVPIRRKRSI-EEAIPAVCKTRTVIYEIPRSQVD 111
+RPVP ++ EEA+PAVCKTRTVIYEIPRSQVD
Sbjct: 7898 QRPVPAHCAPAVAEEAVPAVCKTRTVIYEIPRSQVD 8005
>gb|M19985.1|HUMPDGFA3 Human platelet-derived growth factor (PDGFA) A chain gene, exon 3
Length = 345
Score = 64.3 bits (155), Expect = 5e-09
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +3
Query: 54 GAEDALETSLRAHGSHAINHVPEKRPVPIRRKRSIEEA 91
G+ED+L+TSLRAHG HA HVPEKRP+PIRRKRSI E+
Sbjct: 141 GSEDSLDTSLRAHGVHATKHVPEKRPLPIRRKRSIGES 254
>gb|AC018490.6| Drosophila melanogaster, chromosome X, region 17E-17F, BAC clone
BACR25O02, complete sequence
Length = 165098
Score = 63.2 bits (152), Expect = 1e-08
Identities = 27/93 (29%), Positives = 45/93 (48%)
Frame = +3
Query: 87 SIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVH 146
++ A PA C + I E+ D AN+ P C + RC GCC ++ + CQP+ V
Sbjct: 47406 TVRNATPASCSPQPTIVELKPPAED--EANYYYMPACTRISRCNGCCGSTLISCQPTEVE 47579
Query: 147 HRSVKVAKVEYVRKKPKLKEVQVRLEEHLECAC 179
++V KV+ + + +E+H +C C
Sbjct: 47580 QVQLRVRKVDRAATSGRRPFTIITVEQHTQCRC 47678
>gb|AE003510.2|AE003510 Drosophila melanogaster genomic scaffold 142000013386053 section 27 of
30, complete sequence
Length = 298705
Score = 63.2 bits (152), Expect = 1e-08
Identities = 27/93 (29%), Positives = 45/93 (48%)
Frame = +3
Query: 87 SIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVH 146
++ A PA C + I E+ D AN+ P C + RC GCC ++ + CQP+ V
Sbjct: 84243 TVRNATPASCSPQPTIVELKPPAED--EANYYYMPACTRISRCNGCCGSTLISCQPTEVE 84416
Query: 147 HRSVKVAKVEYVRKKPKLKEVQVRLEEHLECAC 179
++V KV+ + + +E+H +C C
Sbjct: 84417 QVQLRVRKVDRAATSGRRPFTIITVEQHTQCRC 84515
>gb|M20490.1|HUMPDGA3 Human platelet-derived growth factor A-chain gene, exon 3
Length = 463
Score = 59.7 bits (143), Expect = 1e-07
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +1
Query: 39 HSIRDLQRLLEIDSVGAEDALETSLRAHGSHAINHVPEKRPVPIRRKRSIEEA 91
HS R + +L + G+ED+L+TSL G HA HVPEKRP+PIRRKRSI E+
Sbjct: 106 HSARGIHGVL-LPPAGSEDSLDTSLTRDGVHATKHVPEKRPLPIRRKRSIGES 261
>gb|AF059661.1|AF059661 Danio rerio vascular endothelial growth factor 121 isoform (vegf)
mRNA, complete cds
Length = 435
Score = 54.3 bits (129), Expect = 5e-06
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Frame = +1
Query: 80 VPIRRKRSIEEAIP-------AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGC 132
+P +S + IP + CKTR ++ +I + D ++ P CV + RC GC
Sbjct: 76 IPKEGGKSKNDVIPFMDVYKKSACKTRELLVDIIQEYPDEIEHTYI--PSCVVLMRCAGC 249
Query: 133 CNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECAC 179
CN +++C P+ + +++V + V+++ Q+ EH +C C
Sbjct: 250 CNDEALECVPTETRNVTMEVLR---VKQRVSQHNFQLSFTEHTKCEC 381
>gb|AF008594.1|AF008594 Xenopus laevis vascular endothelial growth factor 196 (VEGF) mRNA,
complete cds
Length = 737
Score = 54.3 bits (129), Expect = 5e-06
Identities = 23/88 (26%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +3
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
++C+ R ++ +I Q P ++ P CV + RC GCCN S++C P+ ++ ++++
Sbjct: 294 SMCQVREILVDI--FQEYPDEVEYIFKPSCVPLMRCAGCCNDESLECVPTECYNITMQIM 467
Query: 154 KVEYVRKKPKLKE--VQVRLEEHLECAC 179
K+ KP + + + + ++H +C C
Sbjct: 468 KI-----KPHISQHIMDMSFQQHSQCEC 536
>gb|AF016244.1|AF016244 Danio rerio vascular endothelial growth factor isoform 165 (vegf)
mRNA, complete cds
Length = 2678
Score = 54.3 bits (129), Expect = 5e-06
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Frame = +1
Query: 80 VPIRRKRSIEEAIP-------AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGC 132
+P +S + IP + CKTR ++ +I + D ++ P CV + RC GC
Sbjct: 661 IPKEGGKSKNDVIPFMDVYKKSACKTRELLVDIIQEYPDEIEHTYI--PSCVVLMRCAGC 834
Query: 133 CNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECAC 179
CN +++C P+ + +++V + V+++ Q+ EH +C C
Sbjct: 835 CNDEALECVPTETRNVTMEVLR---VKQRVSQHNFQLSFTEHTKCEC 966
>gb|AF008593.1|AF008593 Xenopus laevis vascular endothelial growth factor 122 (VEGF) mRNA,
complete cds
Length = 599
Score = 54.3 bits (129), Expect = 5e-06
Identities = 23/88 (26%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +3
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
++C+ R ++ +I Q P ++ P CV + RC GCCN S++C P+ ++ ++++
Sbjct: 294 SMCQVREILVDI--FQEYPDEVEYIFKPSCVPLMRCAGCCNDESLECVPTECYNITMQIM 467
Query: 154 KVEYVRKKPKLKE--VQVRLEEHLECAC 179
K+ KP + + + + ++H +C C
Sbjct: 468 KI-----KPHISQHIMDMSFQQHSQCEC 536
>dbj|AB004274.1|AB004274 Bos taurus mRNA for vascular endothelial growth factor B186
precursor, partial cds
Length = 1073
Score = 51.6 bits (122), Expect = 3e-05
Identities = 27/86 (31%), Positives = 46/86 (53%)
Frame = +3
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
A C+ R V+ + ++ T A L+ P CV V+RC GCC ++C P+ H +++
Sbjct: 93 ATCQPREVVVPL-NMELMGTVAKQLV-PSCVTVQRCGGCCPDDGLECVPTGQHQVRMQIL 266
Query: 154 KVEYVRKKPKLKEVQVRLEEHLECAC 179
++Y P + ++ LEEH +C C
Sbjct: 267 MIQY----PSSQLGEMSLEEHSQCEC 332
>dbj|AB004273.1|AB004273 Bos taurus mRNA for vascular endothelial growth factor B167
precursor, complete cds
Length = 1107
Score = 51.6 bits (122), Expect = 3e-05
Identities = 27/86 (31%), Positives = 46/86 (53%)
Frame = +3
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
A C+ R V+ + ++ T A L+ P CV V+RC GCC ++C P+ H +++
Sbjct: 228 ATCQPREVVVPL-NMELMGTVAKQLV-PSCVTVQRCGGCCPDDGLECVPTGQHQVRMQIL 401
Query: 154 KVEYVRKKPKLKEVQVRLEEHLECAC 179
++Y P + ++ LEEH +C C
Sbjct: 402 MIQY----PSSQLGEMSLEEHSQCEC 467
>ref|NM_011697.1| Mus musculus vascular endothelial growth factor B (Vegfb), mRNA
Length = 1236
Score = 50.4 bits (119), Expect = 7e-05
Identities = 26/86 (30%), Positives = 44/86 (50%)
Frame = +1
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
A C+ R V+ +P S + + P CV V+RC GCC ++C P+ H +++
Sbjct: 325 ATCQPREVV--VPLSMELMGNVVKQLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQIL 498
Query: 154 KVEYVRKKPKLKEVQVRLEEHLECAC 179
++Y P + ++ LEEH +C C
Sbjct: 499 MIQY----PSSQLGEMSLEEHSQCEC 564
>gb|U43836.1|MMU43836 Mus musculus VEGF-related factor mvrf186 precursor mRNA, complete
cds
Length = 1236
Score = 50.4 bits (119), Expect = 7e-05
Identities = 26/86 (30%), Positives = 44/86 (50%)
Frame = +1
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
A C+ R V+ +P S + + P CV V+RC GCC ++C P+ H +++
Sbjct: 325 ATCQPREVV--VPLSMELMGNVVKQLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQIL 498
Query: 154 KVEYVRKKPKLKEVQVRLEEHLECAC 179
++Y P + ++ LEEH +C C
Sbjct: 499 MIQY----PSSQLGEMSLEEHSQCEC 564
>gb|U43837.1|MMU43837 Mus musculus VEGF-related factor mvrf167 precursor mRNA, complete
cds
Length = 567
Score = 50.4 bits (119), Expect = 7e-05
Identities = 26/86 (30%), Positives = 44/86 (50%)
Frame = +1
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
A C+ R V+ +P S + + P CV V+RC GCC ++C P+ H +++
Sbjct: 133 ATCQPREVV--VPLSMELMGNVVKQLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQIL 306
Query: 154 KVEYVRKKPKLKEVQVRLEEHLECAC 179
++Y P + ++ LEEH +C C
Sbjct: 307 MIQY----PSSQLGEMSLEEHSQCEC 372
>gb|AF022952.1|AF022952 Rattus norvegicus vascular endothelial growth factor B mRNA,
partial cds
Length = 453
Score = 50.4 bits (119), Expect = 7e-05
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +2
Query: 106 PRSQVDPTSANFL------IWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVR 159
PR V P S F+ P CV V+RC GCC ++C P H +++ ++Y
Sbjct: 53 PREVVVPLSMEFMGNVVKQFVPSCVTVQRCGGCCPDDGLECVPIGQHQVRMQILMIQY-- 226
Query: 160 KKPKLKEVQVRLEEHLECAC 179
P + ++ LEEH +C C
Sbjct: 227 --PSSQLGEMSLEEHSQCEC 280
>gb|U52820.1|MMU52820 Mus musculus vascular endothelial growth factor B 186 (VEGF-B)
precursor, mRNA, complete cds
Length = 896
Score = 50.4 bits (119), Expect = 7e-05
Identities = 26/86 (30%), Positives = 44/86 (50%)
Frame = +2
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
A C+ R V+ +P S + + P CV V+RC GCC ++C P+ H +++
Sbjct: 227 ATCQPREVV--VPLSMELMGNVVKQLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQIL 400
Query: 154 KVEYVRKKPKLKEVQVRLEEHLECAC 179
++Y P + ++ LEEH +C C
Sbjct: 401 MIQY----PSSQLGEMSLEEHSQCEC 466
>gb|U48800.1|MMU48800 Mus musculus vascular endothelial growth factor B precursor
(VEGF-B) mRNA, complete cds
Length = 795
Score = 50.4 bits (119), Expect = 7e-05
Identities = 26/86 (30%), Positives = 44/86 (50%)
Frame = +2
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
A C+ R V+ +P S + + P CV V+RC GCC ++C P+ H +++
Sbjct: 227 ATCQPREVV--VPLSMELMGNVVKQLVPSCVTVQRCGGCCPDDGLECVPTGQHQVRMQIL 400
Query: 154 KVEYVRKKPKLKEVQVRLEEHLECAC 179
++Y P + ++ LEEH +C C
Sbjct: 401 MIQY----PSSQLGEMSLEEHSQCEC 466
>gb|U43369.1|HSU43369 Human VEGF related factor isoform VRF167 precursor (VRF) mRNA,
complete cds
Length = 567
Score = 50.1 bits (118), Expect = 9e-05
Identities = 27/86 (31%), Positives = 45/86 (51%)
Frame = +1
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
A C+ R V+ + ++ T A L+ P CV V+RC GCC ++C P+ H +++
Sbjct: 133 ATCQPREVVVPLT-VELMGTVAKQLV-PSCVTVQRCGGCCPDDGLECVPTGQHQVRMQIL 306
Query: 154 KVEYVRKKPKLKEVQVRLEEHLECAC 179
+ Y P + ++ LEEH +C C
Sbjct: 307 MIRY----PSSQLGEMSLEEHSQCEC 372
>ref|NM_003377.1| Homo sapiens vascular endothelial growth factor B (VEGFB), mRNA
Length = 755
Score = 50.1 bits (118), Expect = 9e-05
Identities = 27/86 (31%), Positives = 45/86 (51%)
Frame = +2
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
A C+ R V+ + ++ T A L+ P CV V+RC GCC ++C P+ H +++
Sbjct: 137 ATCQPREVVVPLT-VELMGTVAKQLV-PSCVTVQRCGGCCPDDGLECVPTGQHQVRMQIL 310
Query: 154 KVEYVRKKPKLKEVQVRLEEHLECAC 179
+ Y P + ++ LEEH +C C
Sbjct: 311 MIRY----PSSQLGEMSLEEHSQCEC 376
>gb|U52819.1|HSU52819 Human vascular endothelial growth factor B 186 (VEGF-B) precursor,
mRNA, complete cds
Length = 755
Score = 50.1 bits (118), Expect = 9e-05
Identities = 27/86 (31%), Positives = 45/86 (51%)
Frame = +2
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
A C+ R V+ + ++ T A L+ P CV V+RC GCC ++C P+ H +++
Sbjct: 137 ATCQPREVVVPLT-VELMGTVAKQLV-PSCVTVQRCGGCCPDDGLECVPTGQHQVRMQIL 310
Query: 154 KVEYVRKKPKLKEVQVRLEEHLECAC 179
+ Y P + ++ LEEH +C C
Sbjct: 311 MIRY----PSSQLGEMSLEEHSQCEC 376
>gb|U48801.1|HSU48801 Human vascular endothelial growth factor B precursor (VEGF-B) mRNA,
complete cds
Length = 570
Score = 50.1 bits (118), Expect = 9e-05
Identities = 27/86 (31%), Positives = 45/86 (51%)
Frame = +1
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
A C+ R V+ + ++ T A L+ P CV V+RC GCC ++C P+ H +++
Sbjct: 136 ATCQPREVVVPLT-VELMGTVAKQLV-PSCVTVQRCGGCCPDDGLECVPTGQHQVRMQIL 309
Query: 154 KVEYVRKKPKLKEVQVRLEEHLECAC 179
+ Y P + ++ LEEH +C C
Sbjct: 310 MIRY----PSSQLGEMSLEEHSQCEC 375
>ref|XM_049177.2| Homo sapiens vascular endothelial growth factor B (VEGFB), mRNA
Length = 997
Score = 50.1 bits (118), Expect = 9e-05
Identities = 27/86 (31%), Positives = 45/86 (51%)
Frame = +1
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
A C+ R V+ + ++ T A L+ P CV V+RC GCC ++C P+ H +++
Sbjct: 76 ATCQPREVVVPLT-VELMGTVAKQLV-PSCVTVQRCGGCCPDDGLECVPTGQHQVRMQIL 249
Query: 154 KVEYVRKKPKLKEVQVRLEEHLECAC 179
+ Y P + ++ LEEH +C C
Sbjct: 250 MIRY----PSSQLGEMSLEEHSQCEC 315
>gb|BC008818.1|BC008818 Homo sapiens, vascular endothelial growth factor B, clone MGC:10373
IMAGE:4053976, mRNA, complete cds
Length = 1181
Score = 50.1 bits (118), Expect = 9e-05
Identities = 27/86 (31%), Positives = 45/86 (51%)
Frame = +2
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
A C+ R V+ + ++ T A L+ P CV V+RC GCC ++C P+ H +++
Sbjct: 182 ATCQPREVVVPLT-VELMGTVAKQLV-PSCVTVQRCGGCCPDDGLECVPTGQHQVRMQIL 355
Query: 154 KVEYVRKKPKLKEVQVRLEEHLECAC 179
+ Y P + ++ LEEH +C C
Sbjct: 356 MIRY----PSSQLGEMSLEEHSQCEC 421
>ref|NM_065060.1| Caenorhabditis elegans
Length = 915
Score = 50.1 bits (118), Expect = 9e-05
Identities = 26/86 (30%), Positives = 43/86 (49%), Gaps = 2/86 (2%)
Frame = +1
Query: 96 CKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV 155
C ++V IP+ DP L++P C EVK+C G C S C P ++ VA++
Sbjct: 340 CNLQSVCVPIPQLSDDP---QVLMYPKCYEVKQCVGSCCNSVETCHPGTINLVKKHVAEL 510
Query: 156 EYVRKKPKLKEV--QVRLEEHLECAC 179
Y+ + + ++ +EEH C+C
Sbjct: 511 LYIGNGRFMFNMTKEITMEEHTSCSC 588
>gb|U43368.1|HSU43368 Human VEGF related factor isoform VRF186 precursor (VRF) mRNA,
complete cds
Length = 1079
Score = 50.1 bits (118), Expect = 9e-05
Identities = 27/86 (31%), Positives = 45/86 (51%)
Frame = +3
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
A C+ R V+ + ++ T A L+ P CV V+RC GCC ++C P+ H +++
Sbjct: 135 ATCQPREVVVPLT-VELMGTVAKQLV-PSCVTVQRCGGCCPDDGLECVPTGQHQVRMQIL 308
Query: 154 KVEYVRKKPKLKEVQVRLEEHLECAC 179
+ Y P + ++ LEEH +C C
Sbjct: 309 MIRY----PSSQLGEMSLEEHSQCEC 374
>gb|AF032925.1|AF032925 Rattus norvegicus vascular endothelial growth factor B 186
precursor, mRNA, partial cds
Length = 349
Score = 47.4 bits (111), Expect = 6e-04
Identities = 20/59 (33%), Positives = 32/59 (53%)
Frame = +2
Query: 121 PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECAC 179
P CV V+RC GCC ++C P H +++ ++Y P + ++ LEEH +C C
Sbjct: 59 PSCVTVQRCGGCCPDDGLECVPIGQHQVRMQILMIQY----PSSQLGEMSLEEHSQCEC 223
>gb|AY032728.1| Rattus norvegicus VEGF-D mRNA, complete cds
Length = 1053
Score = 46.2 bits (108), Expect = 0.001
Identities = 28/85 (32%), Positives = 42/85 (48%), Gaps = 1/85 (1%)
Frame = +3
Query: 96 CKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV 155
C R E+ S++ T+ F PPCV V RC GCCN SV C + + S ++ ++
Sbjct: 390 CSPRETCVEVA-SELGKTTNTFFK-PPCVNVFRCGGCCNEESVMCMNTSTSYISKQLFEI 563
Query: 156 EY-VRKKPKLKEVQVRLEEHLECAC 179
+ P+L V V++ H C C
Sbjct: 564 SVPLTSVPEL--VPVKIANHTGCKC 632
>ref|NM_031761.1| Rattus norvegicus c-fos induced growth factor (vascular endothelial
growth factor D) (Figf), mRNA
Length = 1491
Score = 46.2 bits (108), Expect = 0.001
Identities = 28/85 (32%), Positives = 42/85 (48%), Gaps = 1/85 (1%)
Frame = +3
Query: 96 CKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV 155
C R E+ S++ T+ F PPCV V RC GCCN SV C + + S ++ ++
Sbjct: 615 CSPRETCVEVA-SELGKTTNTFFK-PPCVNVFRCGGCCNEESVMCMNTSTSYISKQLFEI 788
Query: 156 EY-VRKKPKLKEVQVRLEEHLECAC 179
+ P+L V V++ H C C
Sbjct: 789 SVPLTSVPEL--VPVKIANHTGCKC 857
>gb|AF014827.1|AF014827 Rattus norvegicus vascular endothelial growth factor D (VEGF-D)
mRNA, complete cds
Length = 1491
Score = 46.2 bits (108), Expect = 0.001
Identities = 28/85 (32%), Positives = 42/85 (48%), Gaps = 1/85 (1%)
Frame = +3
Query: 96 CKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV 155
C R E+ S++ T+ F PPCV V RC GCCN SV C + + S ++ ++
Sbjct: 615 CSPRETCVEVA-SELGKTTNTFFK-PPCVNVFRCGGCCNEESVMCMNTSTSYISKQLFEI 788
Query: 156 EY-VRKKPKLKEVQVRLEEHLECAC 179
+ P+L V V++ H C C
Sbjct: 789 SVPLTSVPEL--VPVKIANHTGCKC 857
>gb|S67520.1|S67520 A3R=F9L homolog...A1R {inverted terminal repeat junction, right
end} [orf virus OV, NZ2, Genomic, 3 genes, 851 nt]
Length = 851
Score = 45.8 bits (107), Expect = 0.002
Identities = 19/48 (39%), Positives = 28/48 (57%)
Frame = +2
Query: 96 CKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPS 143
CK R ++ + + + TS F PPCV + RC GCCN S++C P+
Sbjct: 377 CKPRPIVVPVSETHPELTSQRFN--PPCVTLMRCGGCCNDESLECVPT 514
>gb|AF106020.1|AF106020 Orf virus vascular endothelial growth factor homolog Vegf-e gene,
complete cds
Length = 399
Score = 45.4 bits (106), Expect = 0.002
Identities = 19/48 (39%), Positives = 28/48 (57%)
Frame = +1
Query: 96 CKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPS 143
CK R +++ + + TS F PPCV + RC GCCN S++C P+
Sbjct: 103 CKPRPMVFRVHDEHPELTSQRFN--PPCVTLMRCGGCCNDESLECVPT 240
>gb|BC007789.1|BC007789 Homo sapiens, placental growth factor, vascular endothelial growth
factor-related protein, clone MGC:14095 IMAGE:3629125,
mRNA, complete cds
Length = 1753
Score = 45.4 bits (106), Expect = 0.002
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171
P+ + P CV + RCTGCC ++ C P + ++++ K +R + V++
Sbjct: 529 PSEVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANVTMQLLK---IRSGDRPSYVELTF 699
Query: 172 EEHLECAC--ATSNLNPDHR 189
+H+ C C + P+ R
Sbjct: 700 SQHVRCECRPLREKMKPERR 759
>gb|BC001422.1|BC001422 Homo sapiens, Similar to placental growth factor, vascular
endothelial growth factor-related protein, clone
MGC:1683 IMAGE:3139175, mRNA, complete cds
Length = 1768
Score = 45.4 bits (106), Expect = 0.002
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +2
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171
P+ + P CV + RCTGCC ++ C P + ++++ K +R + V++
Sbjct: 551 PSEVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANVTMQLLK---IRSGDRPSYVELTF 721
Query: 172 EEHLECAC--ATSNLNPDHR 189
+H+ C C + P+ R
Sbjct: 722 SQHVRCECRPLREKMKPERR 781
>gb|AY033151.1| Bothrops insularis vascular endothelial growth factor precursor,
mRNA, complete cds
Length = 1200
Score = 45.4 bits (106), Expect = 0.002
Identities = 26/86 (30%), Positives = 39/86 (45%)
Frame = +3
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
+VC+TR + I D S F P CV RC GCC S+KC + ++
Sbjct: 291 SVCQTRETLVSILEEHPDEVSHIFR--PSCVTALRCGGCCTDESLKCTATGKRSVGREIM 464
Query: 154 KVEYVRKKPKLKEVQVRLEEHLECAC 179
+V+ + K + +Q EH +C C
Sbjct: 465 RVDPHKGTSKTEVMQ--FTEHTDCEC 536
>gb|BC007255.1|BC007255 Homo sapiens, clone MGC:15513 IMAGE:3028008, mRNA, complete cds
Length = 1780
Score = 45.4 bits (106), Expect = 0.002
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171
P+ + P CV + RCTGCC ++ C P + ++++ K +R + V++
Sbjct: 523 PSEVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANVTMQLLK---IRSGDRPSYVELTF 693
Query: 172 EEHLECAC--ATSNLNPDHR 189
+H+ C C + P+ R
Sbjct: 694 SQHVRCECRPLREKMKPERR 753
>dbj|D89628.1|D89628 Mus musculus mRNA for vascular endothelial growth factor D,
complete cds
Length = 1581
Score = 45.1 bits (105), Expect = 0.003
Identities = 44/165 (26%), Positives = 71/165 (42%), Gaps = 12/165 (7%)
Frame = +3
Query: 27 RELIERLARSQIHSIRDLQRLLEIDSVGAED-------ALETSLRAHGSHAINHVPEKRP 79
R ++ER + QI + L+ LL+I +ED SL + S + +H +
Sbjct: 210 RSMLER-SEQQIRAASSLEELLQI--AHSEDWKLWRCRLKLKSLASMDSRSASHRSTRFA 380
Query: 80 VPIRRKRSI----EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNT 135
++ EE C R E+ S++ T+ F PPCV V RC GCCN
Sbjct: 381 ATFYDTETLKVIDEEWQRTQCSPRETCVEVA-SELGKTTNTFFK-PPCVNVFRCGGCCNE 554
Query: 136 SSVKCQPSRVHHRSVKVAKVEY-VRKKPKLKEVQVRLEEHLECAC 179
V C + + S ++ ++ + P+L V V++ H C C
Sbjct: 555 EGVMCMNTSTSYISKQLFEISVPLTSVPEL--VPVKIANHTGCKC 683
>gb|S72960.1|S72960 Homo sapiens placenta growth factor 2 (PlGF-2) mRNA, complete cds
Length = 597
Score = 45.1 bits (105), Expect = 0.003
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171
P+ + P CV + RCTGCC + C P + ++++ K +R + V++
Sbjct: 208 PSEVEHMFSPSCVSLLRCTGCCGDEDLHCVPVETANVTMQLLK---IRSGDRPSYVELTF 378
Query: 172 EEHLECAC--ATSNLNPDHR 189
+H+ C C + P+ R
Sbjct: 379 SQHVRCECRPLREKMKPERR 438
>ref|XM_040407.1| Homo sapiens placental growth factor, vascular endothelial growth
factor-related protein (PGF), mRNA
Length = 1638
Score = 45.1 bits (105), Expect = 0.003
Identities = 18/68 (26%), Positives = 34/68 (49%)
Frame = +2
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171
P+ + P CV + RCTGCC ++ C P + ++++ K +R + V++
Sbjct: 509 PSEVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANVTMQLLK---IRSGDRPSYVELTF 679
Query: 172 EEHLECAC 179
+H+ C C
Sbjct: 680 SQHVRCEC 703
>emb|Y09268.1|ASPLGF Artificial sequence DNA for placental growth factor PLGF
Length = 390
Score = 45.1 bits (105), Expect = 0.003
Identities = 18/68 (26%), Positives = 34/68 (49%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171
P+ + P CV + RCTGCC ++ C P + ++++ K +R + V++
Sbjct: 136 PSEVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANVTMQLLK---IRSGDRPSYVELTF 306
Query: 172 EEHLECAC 179
+H+ C C
Sbjct: 307 SQHVRCEC 330
>ref|NM_010216.1| Mus musculus c-fos induced growth factor (Figf), mRNA
Length = 1890
Score = 45.1 bits (105), Expect = 0.003
Identities = 44/165 (26%), Positives = 71/165 (42%), Gaps = 12/165 (7%)
Frame = +1
Query: 27 RELIERLARSQIHSIRDLQRLLEIDSVGAED-------ALETSLRAHGSHAINHVPEKRP 79
R ++ER + QI + L+ LL+I +ED SL + S + +H +
Sbjct: 397 RSMLER-SEQQIRAASSLEELLQI--AHSEDWKLWRCRLKLKSLASMDSRSASHRSTRFA 567
Query: 80 VPIRRKRSI----EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNT 135
++ EE C R E+ S++ T+ F PPCV V RC GCCN
Sbjct: 568 ATFYDTETLKVIDEEWQRTQCSPRETCVEVA-SELGKTTNTFFK-PPCVNVFRCGGCCNE 741
Query: 136 SSVKCQPSRVHHRSVKVAKVEY-VRKKPKLKEVQVRLEEHLECAC 179
V C + + S ++ ++ + P+L V V++ H C C
Sbjct: 742 EGVMCMNTSTSYISKQLFEISVPLTSVPEL--VPVKIANHTGCKC 870
>emb|X99572.1|MMFIGF Mus musculus mRNA for new member of PDGF/VEGT family of growth
factors
Length = 1890
Score = 45.1 bits (105), Expect = 0.003
Identities = 44/165 (26%), Positives = 71/165 (42%), Gaps = 12/165 (7%)
Frame = +1
Query: 27 RELIERLARSQIHSIRDLQRLLEIDSVGAED-------ALETSLRAHGSHAINHVPEKRP 79
R ++ER + QI + L+ LL+I +ED SL + S + +H +
Sbjct: 397 RSMLER-SEQQIRAASSLEELLQI--AHSEDWKLWRCRLKLKSLASMDSRSASHRSTRFA 567
Query: 80 VPIRRKRSI----EEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNT 135
++ EE C R E+ S++ T+ F PPCV V RC GCCN
Sbjct: 568 ATFYDTETLKVIDEEWQRTQCSPRETCVEVA-SELGKTTNTFFK-PPCVNVFRCGGCCNE 741
Query: 136 SSVKCQPSRVHHRSVKVAKVEY-VRKKPKLKEVQVRLEEHLECAC 179
V C + + S ++ ++ + P+L V V++ H C C
Sbjct: 742 EGVMCMNTSTSYISKQLFEISVPLTSVPEL--VPVKIANHTGCKC 870
>ref|NM_002632.1| Homo sapiens placental growth factor, vascular endothelial growth
factor-related protein (PGF), mRNA
Length = 1645
Score = 45.1 bits (105), Expect = 0.003
Identities = 18/68 (26%), Positives = 34/68 (49%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171
P+ + P CV + RCTGCC ++ C P + ++++ K +R + V++
Sbjct: 517 PSEVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANVTMQLLK---IRSGDRPSYVELTF 687
Query: 172 EEHLECAC 179
+H+ C C
Sbjct: 688 SQHVRCEC 711
>emb|X54936.1|HSPLGF H.sapiens mRNA for placenta growth factor (PlGF)
Length = 1645
Score = 45.1 bits (105), Expect = 0.003
Identities = 18/68 (26%), Positives = 34/68 (49%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171
P+ + P CV + RCTGCC ++ C P + ++++ K +R + V++
Sbjct: 517 PSEVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANVTMQLLK---IRSGDRPSYVELTF 687
Query: 172 EEHLECAC 179
+H+ C C
Sbjct: 688 SQHVRCEC 711
>dbj|AB011078.1|AB011078 Gallus gallus mRNA for VEGF, complete cds
Length = 715
Score = 44.3 bits (103), Expect = 0.005
Identities = 25/106 (23%), Positives = 51/106 (47%), Gaps = 2/106 (1%)
Frame = +3
Query: 76 EKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNT 135
E++P + + + E + C+T + +I Q P ++ P CV + RC GCC
Sbjct: 105 ERKPNEVIKFLEVYER--SFCRTIETLVDI--FQEYPDEVEYIFRPSCVPLMRCAGCCGD 272
Query: 136 SSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQVRLEEHLECAC 179
++C P V++ ++++A++ KP + + +H +C C
Sbjct: 273 EGLECVPVDVYNVTMEIARI-----KPHQSQHIAHMSFLQHSKCDC 395
>gb|S79680.1|S79680 VEGF=vascular endothelial growth factor [Coturnix sp. IF-1995,
embryos, mRNA, 956 nt]
Length = 956
Score = 44.3 bits (103), Expect = 0.005
Identities = 25/106 (23%), Positives = 51/106 (47%), Gaps = 2/106 (1%)
Frame = +3
Query: 76 EKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNT 135
E++P + + + E + C+T + +I Q P ++ P CV + RC GCC
Sbjct: 222 ERKPNEVIKFLEVYER--SFCRTIETLVDI--FQEYPDEVEYIFRPSCVPLMRCAGCCGD 389
Query: 136 SSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQVRLEEHLECAC 179
++C P V++ ++++A++ KP + + +H +C C
Sbjct: 390 EGLECVPVDVYNVTMEIARI-----KPHQSQHIAHMSFLQHSKCDC 512
>ref|XM_104830.1| Homo sapiens similar to c-fos induced growth factor (vascular
endothelial growth factor D) (H. sapiens) (LOC170075),
mRNA
Length = 396
Score = 43.9 bits (102), Expect = 0.007
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 114 SANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEY-VRKKPKLKEVQVRLE 172
S N PPCV V RC GCCN S+ C + + S ++ ++ + P+L V V++
Sbjct: 78 STNTFFKPPCVNVFRCGGCCNEESLICMNTSTSYISKQLFEISVPLTSVPEL--VPVKVA 251
Query: 173 EHLECAC 179
H C C
Sbjct: 252 NHTGCKC 272
>ref|NM_004469.1| Homo sapiens c-fos induced growth factor (vascular endothelial
growth factor D) (FIGF), mRNA
Length = 2116
Score = 43.9 bits (102), Expect = 0.007
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 114 SANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEY-VRKKPKLKEVQVRLE 172
S N PPCV V RC GCCN S+ C + + S ++ ++ + P+L V V++
Sbjct: 888 STNTFFKPPCVNVFRCGGCCNEESLICMNTSTSYISKQLFEISVPLTSVPEL--VPVKVA 1061
Query: 173 EHLECAC 179
H C C
Sbjct: 1062NHTGCKC 1082
>dbj|AB004272.1|AB004272 Bos taurus mRNA for placenta growth factor precursor, complete cds
Length = 1489
Score = 43.9 bits (102), Expect = 0.007
Identities = 20/68 (29%), Positives = 34/68 (49%)
Frame = +3
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171
P+ L P CV + RCTGCC+ S+ C P + ++++ K R + V++
Sbjct: 504 PSEMEHLFSPSCVSLMRCTGCCSDESMHCVPLETANVTMQLMK---YRSLDQPFFVEMSF 674
Query: 172 EEHLECAC 179
+H+ C C
Sbjct: 675 SQHVRCEC 698
>emb|AJ000185.1|HSAJ185 Homo Sapiens mRNA for vascular endothelial growth factor-D
Length = 2029
Score = 43.9 bits (102), Expect = 0.007
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 114 SANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEY-VRKKPKLKEVQVRLE 172
S N PPCV V RC GCCN S+ C + + S ++ ++ + P+L V V++
Sbjct: 789 STNTFFKPPCVNVFRCGGCCNEESLICMNTSTSYISKQLFEISVPLTSVPEL--VPVKVA 962
Query: 173 EHLECAC 179
H C C
Sbjct: 963 NHTGCKC 983
>dbj|D89630.1|D89630 Homo sapiens mRNA for VEGF-D, complete cds
Length = 2028
Score = 43.9 bits (102), Expect = 0.007
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 114 SANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEY-VRKKPKLKEVQVRLE 172
S N PPCV V RC GCCN S+ C + + S ++ ++ + P+L V V++
Sbjct: 781 STNTFFKPPCVNVFRCGGCCNEESLICMNTSTSYISKQLFEISVPLTSVPEL--VPVKVA 954
Query: 173 EHLECAC 179
H C C
Sbjct: 955 NHTGCKC 975
>ref|XM_058314.1| Homo sapiens c-fos induced growth factor (vascular endothelial
growth factor D) (FIGF), mRNA
Length = 1308
Score = 43.9 bits (102), Expect = 0.007
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 114 SANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEY-VRKKPKLKEVQVRLE 172
S N PPCV V RC GCCN S+ C + + S ++ ++ + P+L V V++
Sbjct: 80 STNTFFKPPCVNVFRCGGCCNEESLICMNTSTSYISKQLFEISVPLTSVPEL--VPVKVA 253
Query: 173 EHLECAC 179
H C C
Sbjct: 254 NHTGCKC 274
>emb|Y12863.1|HSY12863 Homo sapiens mRNA for growth factor FIGF
Length = 1866
Score = 43.9 bits (102), Expect = 0.007
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 114 SANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEY-VRKKPKLKEVQVRLE 172
S N PPCV V RC GCCN S+ C + + S ++ ++ + P+L V V++
Sbjct: 622 STNTFFKPPCVNVFRCGGCCNEESLICMNTSTSYISKQLFEISVPLTSVPEL--VPVKVA 795
Query: 173 EHLECAC 179
H C C
Sbjct: 796 NHTGCKC 816
>gb|AF080594.1|AF080594 Rattus norvegicus vascular endothelial growth factor A 110
precursor (VEGF) mRNA, alternatively spliced product,
partial cds
Length = 333
Score = 43.5 bits (101), Expect = 0.009
Identities = 19/68 (27%), Positives = 32/68 (46%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171
P ++ P CV + RC GCCN +++C P+ + +++ K + K Q+ L
Sbjct: 115 PDEIEYIFKPSCVPLMRCAGCCNDEALECVPTSESNVTMQTCKCSCKNTDSRCKARQLEL 294
Query: 172 EEHLECAC 179
E C C
Sbjct: 295 NER-TCRC 315
>gb|AF432867.1|AF432867 Meriones unguiculatus vascular endothelial growth factor C (vegfc)
mRNA, partial cds
Length = 1218
Score = 43.1 bits (100), Expect = 0.012
Identities = 25/84 (29%), Positives = 37/84 (43%)
Frame = +1
Query: 96 CKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV 155
C R V ++ + T+ F PPCV V RC GCCN+ ++C + + S + ++
Sbjct: 112 CMPREVCIDVGKEFGAATNTFFK--PPCVSVYRCGGCCNSEGLQCMNTSTGYLSKTLFEI 285
Query: 156 EYVRKKPKLKEVQVRLEEHLECAC 179
V K V V H C C
Sbjct: 286 T-VPLSQGPKPVTVSFANHTSCRC 354
>gb|S67522.1|S67522 A3R=F9L homolog...A1R {inverted terminal repeat junction, right
end} [orf virus OV, NZ7, Genomic, 3 genes, 1830 nt]
Length = 1830
Score = 43.1 bits (100), Expect = 0.012
Identities = 29/90 (32%), Positives = 37/90 (40%), Gaps = 6/90 (6%)
Frame = +3
Query: 96 CKTR-TVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAK 154
CK R TV+Y + P S N P CV VKRC+GCCN C + +V V+
Sbjct: 447 CKPRDTVVY---LGEEYPESTNLQYNPRCVTVKRCSGCCNGDGQICTAVETRNTTVTVSV 617
Query: 155 VEYVRKKPKLKEVQVRLE-----EHLECAC 179
V L+ EH +C C
Sbjct: 618 TGVSSSSGTNSGVSTNLQRISVTEHTKCDC 707
>gb|U58112.1|MMU58112 Mus musculus Flt4 ligand J7 mRNA, complete cds
Length = 1804
Score = 42.7 bits (99), Expect = 0.015
Identities = 24/84 (28%), Positives = 37/84 (43%)
Frame = +3
Query: 96 CKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV 155
C R V ++ + T+ F PPCV V RC GCCN+ ++C + + S + ++
Sbjct: 522 CMPREVCIDVGKEFGAATNTFFK--PPCVSVYRCGGCCNSEGLQCMNTSTGYLSKTLFEI 695
Query: 156 EYVRKKPKLKEVQVRLEEHLECAC 179
V K V + H C C
Sbjct: 696 T-VPLSQGPKPVTISFANHTSCRC 764
>emb|X94216.1|HSVEGFC H.sapiens mRNA for VEGF-C protein
Length = 1997
Score = 42.7 bits (99), Expect = 0.015
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 114 SANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEE 173
+ N PPCV V RC GCCN+ ++C + + S + ++ V K V +
Sbjct: 790 ATNTFFKPPCVSVYRCGGCCNSEGLQCMNTSTSYLSKTLFEIT-VPLSQGPKPVTISFAN 966
Query: 174 HLECAC 179
H C C
Sbjct: 967 HTSCRC 984
>ref|NM_005429.1| Homo sapiens vascular endothelial growth factor C (VEGFC), mRNA
Length = 2015
Score = 42.7 bits (99), Expect = 0.015
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 114 SANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEE 173
+ N PPCV V RC GCCN+ ++C + + S + ++ V K V +
Sbjct: 810 ATNTFFKPPCVSVYRCGGCCNSEGLQCMNTSTSYLSKTLFEIT-VPLSQGPKPVTISFAN 986
Query: 174 HLECAC 179
H C C
Sbjct: 987 HTSCRC 1004
>gb|U43142.1|HSU43142 Human vascular endothelial growth factor related protein VRP mRNA,
complete cds
Length = 2015
Score = 42.7 bits (99), Expect = 0.015
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 114 SANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEE 173
+ N PPCV V RC GCCN+ ++C + + S + ++ V K V +
Sbjct: 810 ATNTFFKPPCVSVYRCGGCCNSEGLQCMNTSTSYLSKTLFEIT-VPLSQGPKPVTISFAN 986
Query: 174 HLECAC 179
H C C
Sbjct: 987 HTSCRC 1004
>gb|U58111.1|HSU58111 Human FLT4 ligand mRNA, complete cds
Length = 1939
Score = 42.7 bits (99), Expect = 0.015
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 114 SANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEE 173
+ N PPCV V RC GCCN+ ++C + + S + ++ V K V +
Sbjct: 762 ATNTFFKPPCVSVYRCGGCCNSEGLQCMNTSTSYLSKTLFEIT-VPLSQGPKPVTISFAN 938
Query: 174 HLECAC 179
H C C
Sbjct: 939 HTSCRC 956
>gb|AY032729.1| Rattus norvegicus VEGF-C mRNA, complete cds
Length = 1596
Score = 42.7 bits (99), Expect = 0.015
Identities = 24/84 (28%), Positives = 37/84 (43%)
Frame = +1
Query: 96 CKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV 155
C R V ++ + T+ F PPCV V RC GCCN+ ++C + + S + ++
Sbjct: 466 CMPREVCIDVGKEFGAATNTFFK--PPCVSVYRCGGCCNSEGLQCMNTSTGYLSKTLFEI 639
Query: 156 EYVRKKPKLKEVQVRLEEHLECAC 179
V K V + H C C
Sbjct: 640 T-VPLSQGPKPVTISFANHTSCRC 708
>ref|NM_009506.1| Mus musculus vascular endothelial growth factor C (Vegfc), mRNA
Length = 1818
Score = 42.7 bits (99), Expect = 0.015
Identities = 24/84 (28%), Positives = 37/84 (43%)
Frame = +1
Query: 96 CKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV 155
C R V ++ + T+ F PPCV V RC GCCN+ ++C + + S + ++
Sbjct: 532 CMPREVCIDVGKEFGAATNTFFK--PPCVSVYRCGGCCNSEGLQCMNTSTGYLSKTLFEI 705
Query: 156 EYVRKKPKLKEVQVRLEEHLECAC 179
V K V + H C C
Sbjct: 706 T-VPLSQGPKPVTISFANHTSCRC 774
>ref|NM_053653.1| Rattus norvegicus vascular endothelial growth factor C (Vegfc),
mRNA
Length = 1596
Score = 42.7 bits (99), Expect = 0.015
Identities = 24/84 (28%), Positives = 37/84 (43%)
Frame = +1
Query: 96 CKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV 155
C R V ++ + T+ F PPCV V RC GCCN+ ++C + + S + ++
Sbjct: 466 CMPREVCIDVGKEFGAATNTFFK--PPCVSVYRCGGCCNSEGLQCMNTSTGYLSKTLFEI 639
Query: 156 EYVRKKPKLKEVQVRLEEHLECAC 179
V K V + H C C
Sbjct: 640 T-VPLSQGPKPVTISFANHTSCRC 708
>gb|U73620.1|MMU73620 Mus musculus VEGF-C mRNA, complete cds
Length = 1818
Score = 42.7 bits (99), Expect = 0.015
Identities = 24/84 (28%), Positives = 37/84 (43%)
Frame = +1
Query: 96 CKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV 155
C R V ++ + T+ F PPCV V RC GCCN+ ++C + + S + ++
Sbjct: 532 CMPREVCIDVGKEFGAATNTFFK--PPCVSVYRCGGCCNSEGLQCMNTSTGYLSKTLFEI 705
Query: 156 EYVRKKPKLKEVQVRLEEHLECAC 179
V K V + H C C
Sbjct: 706 T-VPLSQGPKPVTISFANHTSCRC 774
>gb|M33750.1|BOVVEGFB Bovine vascular endothelial growth factor (VEGF-B) mRNA, 3' end
Length = 802
Score = 42.4 bits (98), Expect = 0.020
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P F+ P CV + RC GCCN S++C P+ + ++++ ++ KP + ++
Sbjct: 115 PDEIEFIFKPSCVPLMRCGGCCNDESLECVPTEEFNITMQIMRI-----KPHQSQHIGEM 279
Query: 170 RLEEHLECAC 179
+H +C C
Sbjct: 280 SFLQHNKCEC 309
>gb|M32976.1|BOVEGFA Bovine heparin-binding vascular endothelial growth factor (VEGF)
mRNA, complete cds
Length = 1536
Score = 42.4 bits (98), Expect = 0.020
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P F+ P CV + RC GCCN S++C P+ + ++++ ++ KP + ++
Sbjct: 738 PDEIEFIFKPSCVPLMRCGGCCNDESLECVPTEEFNITMQIMRI-----KPHQSQHIGEM 902
Query: 170 RLEEHLECAC 179
+H +C C
Sbjct: 903 SFLQHNKCEC 932
>gb|AF071015.1|AF071015 Ovis aries vascular endothelial growth factor (VEGF) mRNA, complete
cds
Length = 573
Score = 42.4 bits (98), Expect = 0.020
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P F+ P CV + RC GCCN S++C P+ + ++++ ++ KP + ++
Sbjct: 193 PDEIEFIFKPSCVPLMRCGGCCNDESLECVPTEEFNITMQIMRI-----KPHQSQHIGEM 357
Query: 170 RLEEHLECAC 179
+H +C C
Sbjct: 358 SFLQHNKCEC 387
>emb|X89506.1|OAVEGF O.aries mRNA for vascular endothelial growth factor
Length = 464
Score = 42.4 bits (98), Expect = 0.020
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P F+ P CV + RC GCCN S++C P+ + ++++ ++ KP + ++
Sbjct: 193 PDEIEFIFKPSCVPLMRCGGCCNDESLECVPTEEFNITMQIMRI-----KPHQSQHIGEM 357
Query: 170 RLEEHLECAC 179
+H +C C
Sbjct: 358 SFLQHNKCEC 387
>gb|AF250375.1|AF250375 Ovis aries vascular endothelial growth factor (VEGF) mRNA, partial
cds
Length = 658
Score = 42.4 bits (98), Expect = 0.020
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P F+ P CV + RC GCCN S++C P+ + ++++ ++ KP + ++
Sbjct: 111 PDEIEFIFKPSCVPLMRCGGCCNDESLECVPTEEFNITMQIMRI-----KPHQSQHIGEM 275
Query: 170 RLEEHLECAC 179
+H +C C
Sbjct: 276 SFLQHNKCEC 305
>gb|M31836.1|BOVVEGFA Bovine vascular endothelial growth factor (VEGF-A) mRNA, 3' end
Length = 934
Score = 42.4 bits (98), Expect = 0.020
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P F+ P CV + RC GCCN S++C P+ + ++++ ++ KP + ++
Sbjct: 115 PDEIEFIFKPSCVPLMRCGGCCNDESLECVPTEEFNITMQIMRI-----KPHQSQHIGEM 279
Query: 170 RLEEHLECAC 179
+H +C C
Sbjct: 280 SFLQHNKCEC 309
>dbj|AB004275.1|AB004275 Bos taurus mRNA for vascular endothelial growth factor C, complete
cds
Length = 1777
Score = 42.0 bits (97), Expect = 0.026
Identities = 24/84 (28%), Positives = 36/84 (42%)
Frame = +1
Query: 96 CKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV 155
C R V ++ + T+ F PPCV V RC GCCN+ +C + + S + ++
Sbjct: 511 CMPREVCIDVGKEFGAATNTFFK--PPCVSVYRCGGCCNSEGQQCMNTSTSYLSKTLFEI 684
Query: 156 EYVRKKPKLKEVQVRLEEHLECAC 179
V K V + H C C
Sbjct: 685 T-VPLSQGPKPVTISFANHTSCRC 753
>emb|Y15837.1|CCY15837 Coturnix coturnix mRNA for vascular endothelial growth factor C
Length = 1257
Score = 42.0 bits (97), Expect = 0.026
Identities = 24/84 (28%), Positives = 37/84 (43%)
Frame = +1
Query: 96 CKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV 155
C R V ++ + T+ F PPCV + RC GCCN+ ++C ++ S + ++
Sbjct: 388 CMPREVCVDVGKEFGATTNTFFK--PPCVSIYRCGGCCNSEGLQCMNISTNYISKTLFEI 561
Query: 156 EYVRKKPKLKEVQVRLEEHLECAC 179
V K V V H C C
Sbjct: 562 T-VPLSHGPKPVTVSFANHTSCRC 630
>gb|AC092673.3| Homo sapiens chromosome 4 clone RP11-624A4, complete sequence
Length = 166339
Score = 41.6 bits (96), Expect = 0.034
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -3
Query: 114 SANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHH--RSVKVAKVEYVRKKP 162
+ N PPCV V RC GCCN+ ++C + + ++V +A Y+R+ P
Sbjct: 14543 ATNTFFKPPCVSVYRCGGCCNSEGLQCMNTSTSYLSKTVGIAHSCYLREPP 14391
>gb|AF215726.1|AF215726 Rattus norvegicus vascular endothelial growth factor-A120 mRNA,
alternatively spliced, complete cds
Length = 441
Score = 41.6 bits (96), Expect = 0.034
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN +++C P+ S A ++ +R KP + ++
Sbjct: 193 PDEIEYIFKPSCVPLMRCAGCCNDEALECVPT-----SESNATMQIMRIKPHQSQHIGEM 357
Query: 170 RLEEHLECAC 179
+H C C
Sbjct: 358 SFLQHSRCEC 387
>gb|AF152593.1|AF152593 Capreolus capreolus vascular endothelial growth factor isoform 121
(VEGF) mRNA, partial cds
Length = 236
Score = 41.6 bits (96), Expect = 0.034
Identities = 14/45 (31%), Positives = 27/45 (59%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVE 156
P F+ P CV + RC GCCN S++C P+ + ++++ +++
Sbjct: 10 PDEIEFIFKPSCVPLMRCGGCCNDESLECVPTEEFNITMQIMRIK 144
>ref|NM_009505.1| Mus musculus vascular endothelial growth factor (Vegf), mRNA
Length = 980
Score = 41.6 bits (96), Expect = 0.034
Identities = 18/70 (25%), Positives = 35/70 (49%), Gaps = 2/70 (2%)
Frame = +3
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171
P ++ P CV + RC GCCN +++C P+ + ++++ ++ KP + R+
Sbjct: 279 PDEIEYIFKPSCVPLMRCAGCCNDEALECVPTSESNITMQIMRI-----KPHQSQHIERM 443
Query: 172 E--EHLECAC 179
+H C C
Sbjct: 444 SFLQHSRCEC 473
>gb|M95200.1|MUSVEGF Mouse vascular endothelial growth factor mRNA, complete cds
Length = 980
Score = 41.6 bits (96), Expect = 0.034
Identities = 18/70 (25%), Positives = 35/70 (49%), Gaps = 2/70 (2%)
Frame = +3
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171
P ++ P CV + RC GCCN +++C P+ + ++++ ++ KP + R+
Sbjct: 279 PDEIEYIFKPSCVPLMRCAGCCNDEALECVPTSESNITMQIMRI-----KPHQSQHIERM 443
Query: 172 E--EHLECAC 179
+H C C
Sbjct: 444 SFLQHSRCEC 473
>gb|AF152594.1|AF152594 Capreolus capreolus vascular endothelial growth factor isoform 165
(VEGF) mRNA, partial cds
Length = 369
Score = 41.6 bits (96), Expect = 0.034
Identities = 14/45 (31%), Positives = 27/45 (59%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVE 156
P F+ P CV + RC GCCN S++C P+ + ++++ +++
Sbjct: 10 PDEIEFIFKPSCVPLMRCGGCCNDESLECVPTEEFNITMQIMRIK 144
>gb|M32167.1|RATGFGDVA Rat glioma-derived vascular endothelial cell growth factor mRNA,
complete cds
Length = 630
Score = 41.2 bits (95), Expect = 0.044
Identities = 18/85 (21%), Positives = 38/85 (44%)
Frame = +2
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171
P ++ P CV + RC GCCN +++C P+ + ++++ +++ + + E+
Sbjct: 197 PDEIEYIFKPSCVPLMRCAGCCNDEALECVPTSESNVTMQIMRIK-PHQSQHIGEMSFLQ 373
Query: 172 EEHLECACATSNLNPDHREEETDVR 196
EC P++ E R
Sbjct: 374 HSRCECRPKKDRTKPENHCEPCSER 448
>gb|S38083.1|S38083 vascular endothelial growth factor-1=angiogenic mitogen
{alternatively spliced} [mice, embryo, mRNA, 589 nt]
Length = 589
Score = 41.2 bits (95), Expect = 0.044
Identities = 18/85 (21%), Positives = 38/85 (44%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171
P ++ P CV + RC GCCN +++C P+ + ++++ +++ + + E+
Sbjct: 205 PDEIEYIFKPSCVPLMRCAGCCNDEALECVPTSESNITMQIMRIK-PHQSQHIGEMSFLQ 381
Query: 172 EEHLECACATSNLNPDHREEETDVR 196
EC P++ E R
Sbjct: 382 HSRCECRPKKDRTKPENHCEPCSER 456
>gb|AY033506.1| Rattus norvegicus clone 5 vascular endothelial growth factor (VEGF)
mRNA, complete cds, alternatively spliced
Length = 590
Score = 41.2 bits (95), Expect = 0.044
Identities = 18/85 (21%), Positives = 38/85 (44%)
Frame = +3
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171
P ++ P CV + RC GCCN +++C P+ + ++++ +++ + + E+
Sbjct: 204 PDEIEYIFKPSCVPLMRCAGCCNDEALECVPTSESNVTMQIMRIK-PHQSQHIGEMSFLQ 380
Query: 172 EEHLECACATSNLNPDHREEETDVR 196
EC P++ E R
Sbjct: 381 HSRCECRPKKDRTKPENHCEPCSER 455
>gb|AY033504.1| Rattus norvegicus clone 2 vascular endothelial growth factor (VEGF)
mRNA, complete cds, alternatively spliced
Length = 541
Score = 41.2 bits (95), Expect = 0.044
Identities = 18/85 (21%), Positives = 38/85 (44%)
Frame = +2
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171
P ++ P CV + RC GCCN +++C P+ + ++++ +++ + + E+
Sbjct: 155 PDEIEYIFKPSCVPLMRCAGCCNDEALECVPTSESNVTMQIMRIK-PHQSQHIGEMSFLQ 331
Query: 172 EEHLECACATSNLNPDHREEETDVR 196
EC P++ E R
Sbjct: 332 HSRCECRPKKDRTKPENHCEPCSER 406
>gb|M84230.1|GPIVEGFA Guinea pig vascular endothelial growth factor mRNA, 3' end
Length = 495
Score = 40.8 bits (94), Expect = 0.057
Identities = 18/70 (25%), Positives = 36/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN S++C P+ + ++++ ++ KP + ++
Sbjct: 115 PDEIEYIFKPSCVPLMRCGGCCNDESLECVPTEEFNITMQIMRI-----KPHQGQHIGEM 279
Query: 170 RLEEHLECAC 179
+H +C C
Sbjct: 280 SFLQHSKCEC 309
>gb|AY033508.1| Rattus norvegicus clone 10 vascular endothelial growth factor
(VEGF) mRNA, complete cds, alternatively spliced
Length = 662
Score = 40.4 bits (93), Expect = 0.075
Identities = 17/70 (24%), Positives = 35/70 (49%), Gaps = 2/70 (2%)
Frame = +3
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN +++C P+ + ++++ ++ KP + ++
Sbjct: 204 PDEIEYIFKPSCVPLMRCAGCCNDEALECVPTSESNVTMQIMRI-----KPHQSQHIGEM 368
Query: 170 RLEEHLECAC 179
+H C C
Sbjct: 369 SFLQHSRCEC 398
>gb|AF260738.1|AF260738 Homo sapiens platelet-derived growth factor C (PDGFC) mRNA, complete
cds
Length = 1804
Score = 40.4 bits (93), Expect = 0.075
Identities = 26/70 (37%), Positives = 35/70 (49%), Gaps = 8/70 (11%)
Frame = +1
Query: 118 LIWPPCVEVKRCTG---CC--NTSSVKCQPSRV---HHRSVKVAKVEYVRKKPKLKEVQV 169
+ WP C+ VKRC G CC N + +C PS+V +H +++ VR K V
Sbjct: 967 IFWPGCLLVKRCGGNCACCLHNCNECQCVPSKVTKKYHEVLQLRPKTGVRGLHK-SLTDV 1143
Query: 170 RLEEHLECAC 179
LE H EC C
Sbjct: 1144 ALEHHEECDC 1173
>gb|AF244813.1|AF244813 Homo sapiens platelet-derived growth factor C mRNA, complete cds
Length = 2152
Score = 40.4 bits (93), Expect = 0.075
Identities = 26/70 (37%), Positives = 35/70 (49%), Gaps = 8/70 (11%)
Frame = +3
Query: 118 LIWPPCVEVKRCTG---CC--NTSSVKCQPSRV---HHRSVKVAKVEYVRKKPKLKEVQV 169
+ WP C+ VKRC G CC N + +C PS+V +H +++ VR K V
Sbjct: 993 IFWPGCLLVKRCGGNCACCLHNCNECQCVPSKVTKKYHEVLQLRPKTGVRGLHK-SLTDV 1169
Query: 170 RLEEHLECAC 179
LE H EC C
Sbjct: 1170 ALEHHEECDC 1199
>gb|AY033503.1| Rattus norvegicus clone 1 vascular endothelial growth factor (VEGF)
mRNA, complete cds, alternatively spliced
Length = 409
Score = 40.4 bits (93), Expect = 0.075
Identities = 17/70 (24%), Positives = 35/70 (49%), Gaps = 2/70 (2%)
Frame = +2
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN +++C P+ + ++++ ++ KP + ++
Sbjct: 155 PDEIEYIFKPSCVPLMRCAGCCNDEALECVPTSESNVTMQIMRI-----KPHQSQHIGEM 319
Query: 170 RLEEHLECAC 179
+H C C
Sbjct: 320 SFLQHSRCEC 349
>gb|S37052.1|S37052 vascular endothelial growth factor-3=angiogenic mitogen [mice,
embryo, mRNA, 661 nt]
Length = 661
Score = 40.4 bits (93), Expect = 0.075
Identities = 17/70 (24%), Positives = 35/70 (49%), Gaps = 2/70 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN +++C P+ + ++++ ++ KP + ++
Sbjct: 205 PDEIEYIFKPSCVPLMRCAGCCNDEALECVPTSESNITMQIMRI-----KPHQSQHIGEM 369
Query: 170 RLEEHLECAC 179
+H C C
Sbjct: 370 SFLQHSRCEC 399
>ref|NM_016205.1| Homo sapiens platelet derived growth factor C (PDGFC), mRNA
Length = 3007
Score = 40.4 bits (93), Expect = 0.075
Identities = 26/70 (37%), Positives = 35/70 (49%), Gaps = 8/70 (11%)
Frame = +3
Query: 118 LIWPPCVEVKRCTG---CC--NTSSVKCQPSRV---HHRSVKVAKVEYVRKKPKLKEVQV 169
+ WP C+ VKRC G CC N + +C PS+V +H +++ VR K V
Sbjct: 1296 IFWPGCLLVKRCGGNCACCLHNCNECQCVPSKVTKKYHEVLQLRPKTGVRGLHK-SLTDV 1472
Query: 170 RLEEHLECAC 179
LE H EC C
Sbjct: 1473 ALEHHEECDC 1502
>gb|AF091434.1|AF091434 Homo sapiens secretory growth factor-like protein fallotein mRNA,
complete cds
Length = 3007
Score = 40.4 bits (93), Expect = 0.075
Identities = 26/70 (37%), Positives = 35/70 (49%), Gaps = 8/70 (11%)
Frame = +3
Query: 118 LIWPPCVEVKRCTG---CC--NTSSVKCQPSRV---HHRSVKVAKVEYVRKKPKLKEVQV 169
+ WP C+ VKRC G CC N + +C PS+V +H +++ VR K V
Sbjct: 1296 IFWPGCLLVKRCGGNCACCLHNCNECQCVPSKVTKKYHEVLQLRPKTGVRGLHK-SLTDV 1472
Query: 170 RLEEHLECAC 179
LE H EC C
Sbjct: 1473 ALEHHEECDC 1502
>gb|AF186236.1|AF186236 Spalax ehrenbergi vascular endothelial growth factor (vegf) mRNA,
complete cds
Length = 573
Score = 40.4 bits (93), Expect = 0.075
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 14/79 (17%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV--------------EY 157
P ++ P CV + RC GCCN +++C P+ + ++++ ++ ++
Sbjct: 193 PDEIEYIFKPSCVPLMRCGGCCNDEALECVPTSESNITMQIMRIKPHQSQHIGEMSFLQH 372
Query: 158 VRKKPKLKEVQVRLEEHLE 176
R + + K+ + RLE H E
Sbjct: 373 NRCECRPKKDRTRLENHCE 429
>gb|S38100.1|S38100 vascular endothelial growth factor-2=angiogenic mitogen
{alternatively spliced} [mice, embryo, mRNA, 457 nt]
Length = 457
Score = 40.4 bits (93), Expect = 0.075
Identities = 17/70 (24%), Positives = 35/70 (49%), Gaps = 2/70 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN +++C P+ + ++++ ++ KP + ++
Sbjct: 205 PDEIEYIFKPSCVPLMRCAGCCNDEALECVPTSESNITMQIMRI-----KPHQSQHIGEM 369
Query: 170 RLEEHLECAC 179
+H C C
Sbjct: 370 SFLQHSRCEC 399
>dbj|AB033831.1|AB033831 Homo sapiens hSCDGF mRNA for spinal cord-derived growth factor,
complete cds
Length = 1817
Score = 40.4 bits (93), Expect = 0.075
Identities = 26/70 (37%), Positives = 35/70 (49%), Gaps = 8/70 (11%)
Frame = +3
Query: 118 LIWPPCVEVKRCTG---CC--NTSSVKCQPSRV---HHRSVKVAKVEYVRKKPKLKEVQV 169
+ WP C+ VKRC G CC N + +C PS+V +H +++ VR K V
Sbjct: 1131 IFWPGCLLVKRCGGNCACCLHNCNECQCVPSKVTKKYHEVLQLRPKTGVRGLHK-SLTDV 1307
Query: 170 RLEEHLECAC 179
LE H EC C
Sbjct: 1308 ALEHHEECDC 1337
>emb|AX028085.1|AX028085 Sequence 56 from Patent WO0037641
Length = 261
Score = 40.4 bits (93), Expect = 0.075
Identities = 26/70 (37%), Positives = 35/70 (49%), Gaps = 8/70 (11%)
Frame = +2
Query: 118 LIWPPCVEVKRCTG---CC--NTSSVKCQPSRV---HHRSVKVAKVEYVRKKPKLKEVQV 169
+ WP C+ VKRC G CC N + +C PS+V +H +++ VR K V
Sbjct: 14 IFWPGCLLVKRCGGNCACCLHNCNECQCVPSKVTKKYHEVLQLRPKTGVRGLHK-SLTDV 190
Query: 170 RLEEHLECAC 179
LE H EC C
Sbjct: 191 ALEHHEECDC 220
>emb|AX028064.1|AX028064 Sequence 35 from Patent WO0037641
Length = 261
Score = 40.4 bits (93), Expect = 0.075
Identities = 26/70 (37%), Positives = 35/70 (49%), Gaps = 8/70 (11%)
Frame = +2
Query: 118 LIWPPCVEVKRCTG---CC--NTSSVKCQPSRV---HHRSVKVAKVEYVRKKPKLKEVQV 169
+ WP C+ VKRC G CC N + +C PS+V +H +++ VR K V
Sbjct: 14 IFWPGCLLVKRCGGNCACCLHNCNECQCVPSKVTKKYHEVLQLRPKTGVRGLHK-SLTDV 190
Query: 170 RLEEHLECAC 179
LE H EC C
Sbjct: 191 ALEHHEECDC 220
>gb|AF222779.1|AF222779 Rattus norvegicus vascular endothelial growth factor-A144 mRNA,
alternatively spliced, complete cds
Length = 513
Score = 40.4 bits (93), Expect = 0.075
Identities = 17/70 (24%), Positives = 35/70 (49%), Gaps = 2/70 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN +++C P+ + ++++ ++ KP + ++
Sbjct: 193 PDEIEYIFKPSCVPLMRCAGCCNDEALECVPTSESNVTMQIMRI-----KPHQSQHIGEM 357
Query: 170 RLEEHLECAC 179
+H C C
Sbjct: 358 SFLQHSRCEC 387
>emb|AX028032.1|AX028032 Sequence 3 from Patent WO0037641
Length = 1035
Score = 40.4 bits (93), Expect = 0.075
Identities = 26/70 (37%), Positives = 35/70 (49%), Gaps = 8/70 (11%)
Frame = +1
Query: 118 LIWPPCVEVKRCTG---CC--NTSSVKCQPSRV---HHRSVKVAKVEYVRKKPKLKEVQV 169
+ WP C+ VKRC G CC N + +C PS+V +H +++ VR K V
Sbjct: 805 IFWPGCLLVKRCGGNCACCLHNCNECQCVPSKVTKKYHEVLQLRPKTGVRGLHK-SLTDV 981
Query: 170 RLEEHLECAC 179
LE H EC C
Sbjct: 982 ALEHHEECDC 1011
>gb|AY033507.1| Rattus norvegicus clone 6 vascular endothelial growth factor (VEGF)
mRNA, complete cds, alternatively spliced
Length = 458
Score = 40.4 bits (93), Expect = 0.075
Identities = 17/70 (24%), Positives = 35/70 (49%), Gaps = 2/70 (2%)
Frame = +3
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN +++C P+ + ++++ ++ KP + ++
Sbjct: 204 PDEIEYIFKPSCVPLMRCAGCCNDEALECVPTSESNVTMQIMRI-----KPHQSQHIGEM 368
Query: 170 RLEEHLECAC 179
+H C C
Sbjct: 369 SFLQHSRCEC 398
>ref|NM_031836.1| Rattus norvegicus vascular endothelial growth factor (Vegf), mRNA
Length = 645
Score = 40.4 bits (93), Expect = 0.075
Identities = 17/70 (24%), Positives = 35/70 (49%), Gaps = 2/70 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN +++C P+ + ++++ ++ KP + ++
Sbjct: 193 PDEIEYIFKPSCVPLMRCAGCCNDEALECVPTSESNVTMQIMRI-----KPHQSQHIGEM 357
Query: 170 RLEEHLECAC 179
+H C C
Sbjct: 358 SFLQHSRCEC 387
>gb|AF215725.1|AF215725 Rattus norvegicus vascular endothelial growth factor-A188 mRNA,
alternatively spliced, complete cds
Length = 645
Score = 40.4 bits (93), Expect = 0.075
Identities = 17/70 (24%), Positives = 35/70 (49%), Gaps = 2/70 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN +++C P+ + ++++ ++ KP + ++
Sbjct: 193 PDEIEYIFKPSCVPLMRCAGCCNDEALECVPTSESNVTMQIMRI-----KPHQSQHIGEM 357
Query: 170 RLEEHLECAC 179
+H C C
Sbjct: 358 SFLQHSRCEC 387
>dbj|AB020216.1|AB020216 Oryctolagus cuniculus mRNA for vascular endothelial growth factor,
partial cds
Length = 203
Score = 40.0 bits (92), Expect = 0.098
Identities = 13/45 (28%), Positives = 27/45 (59%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVE 156
P ++ P CV + RC GCCN S++C P+ + ++++ +++
Sbjct: 58 PDEIEYIFKPSCVPLVRCGGCCNDESLECVPTEEFNVTMQIMRIK 192
>gb|AF022179.1|AF022179 Oryctolagus cuniculus vascular endothelial growth factor (VEGF)
mRNA, partial cds
Length = 226
Score = 40.0 bits (92), Expect = 0.098
Identities = 13/45 (28%), Positives = 27/45 (59%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVE 156
P ++ P CV + RC GCCN S++C P+ + ++++ +++
Sbjct: 22 PDEIEYIFKPSCVPLVRCGGCCNDESLECVPTEEFNVTMQIMRIK 156
>gb|AF133249.1|AF133249 Canis familiaris vascular endothelial growth factor 182 (VEGF)
mRNA, complete cds
Length = 654
Score = 39.7 bits (91), Expect = 0.13
Identities = 21/87 (24%), Positives = 41/87 (46%), Gaps = 2/87 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN ++C P+ + ++++ ++ KP + ++
Sbjct: 193 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEEFNITMQIMRI-----KPHQGQHIGEM 357
Query: 170 RLEEHLECACATSNLNPDHREEETDVR 196
+H +C C R+E+ VR
Sbjct: 358 SFLQHSKCECRPK--KDRARQEKKSVR 432
>gb|K01400.1|HUMSISA5 Human c-sis proto-oncogene for platelet-derived growth factor, exon
5 and flanks
Length = 175
Score = 39.7 bits (91), Expect = 0.13
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 150 VKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
++V K+E VRKKP K+ V LE+HL C C T
Sbjct: 10 LQVRKIEIVRKKPIFKKATVTLEDHLACKCET 105
>gb|AF286725.1|AF286725 Mus musculus platelet-derived growth factor C (Pdgfc) mRNA,
complete cds
Length = 1038
Score = 39.7 bits (91), Expect = 0.13
Identities = 29/83 (34%), Positives = 40/83 (47%), Gaps = 10/83 (12%)
Frame = +1
Query: 107 RSQVDPTSANFLIWPPCVEVKRCTG---CC--NTSSVKCQPSRVHHRSVKVAKVEYVRKK 161
R ++ T F WP C+ VKRC G CC N + +C P +V + K +V +R K
Sbjct: 778 REELKRTDTRF--WPGCLLVKRCGGNCACCLHNCNECQCVPRKV---TKKYHEVLQLRPK 942
Query: 162 PKLKEV-----QVRLEEHLECAC 179
+K + V LE H EC C
Sbjct: 943 TGVKGLHKSLTDVALEHHEECDC 1011
>gb|AF133250.1|AF133250 Canis familiaris vascular endothelial growth factor 188 (VEGF)
mRNA, complete cds
Length = 672
Score = 39.7 bits (91), Expect = 0.13
Identities = 21/87 (24%), Positives = 41/87 (46%), Gaps = 2/87 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN ++C P+ + ++++ ++ KP + ++
Sbjct: 193 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEEFNITMQIMRI-----KPHQGQHIGEM 357
Query: 170 RLEEHLECACATSNLNPDHREEETDVR 196
+H +C C R+E+ VR
Sbjct: 358 SFLQHSKCECRPK--KDRARQEKKSVR 432
>gb|K01916.1|HUMSIS4 Human platelet-derived growth factor (c-sis; PDGF2) oncogene, exon
4
Length = 203
Score = 39.7 bits (91), Expect = 0.13
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 150 VKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
++V K+E VRKKP K+ V LE+HL C C T
Sbjct: 34 LQVRKIEIVRKKPIFKKATVTLEDHLACKCET 129
>dbj|AB053350.1|AB053350 Equus caballus mRNA for vascular endothelial growth factor 164,
complete cds
Length = 624
Score = 39.7 bits (91), Expect = 0.13
Identities = 17/70 (24%), Positives = 35/70 (49%), Gaps = 2/70 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN ++C P+ + ++++ ++ KP + ++
Sbjct: 244 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTAEFNITMQIMRI-----KPHQSQHIGEM 408
Query: 170 RLEEHLECAC 179
+H +C C
Sbjct: 409 SFLQHSKCEC 438
>emb|X00561.1|HSSISB4 Human proto-oncogene c-sis fragment for PDGF B chain precursor
(platelet-derived growth factor)
Length = 157
Score = 39.7 bits (91), Expect = 0.13
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 150 VKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
++V K+E VRKKP K+ V LE+HL C C T
Sbjct: 1 LQVRKIEIVRKKPIFKKATVTLEDHLACKCET 96
>gb|M84452.1|MUSSIS05 Mus musculus platelet-derived growth factor beta-chain (sis) gene,
exon 5
Length = 311
Score = 39.7 bits (91), Expect = 0.13
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +3
Query: 150 VKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
++V K+E VRKKP K+ V LE+HL C C T
Sbjct: 135 LQVRKIEIVRKKPIFKKATVTLEDHLACKCET 230
>gb|M64848.1|MUSCSIS05 Mouse platelet-derived growth factor B chain (c-sis) gene, exon 5
Length = 311
Score = 39.7 bits (91), Expect = 0.13
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +3
Query: 150 VKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
++V K+E VRKKP K+ V LE+HL C C T
Sbjct: 135 LQVRKIEIVRKKPIFKKATVTLEDHLACKCET 230
>gb|AF266467.1|AF266467 Mus musculus platelet-derived growth factor C (Pdgfc) mRNA, complete
cds
Length = 3512
Score = 39.3 bits (90), Expect = 0.17
Identities = 26/72 (36%), Positives = 36/72 (49%), Gaps = 10/72 (13%)
Frame = +2
Query: 118 LIWPPCVEVKRCTG---CC--NTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEV----- 167
+ WP C+ VKRC G CC N + +C P +V + K +V +R K +K +
Sbjct: 1826 IFWPGCLLVKRCGGNCACCLHNCNECQCVPRKV---TKKYHEVLQLRPKTGVKGLHKSLT 1996
Query: 168 QVRLEEHLECAC 179
V LE H EC C
Sbjct: 1997 DVALEHHEECDC 2032
>gb|S85192.1|S85192 Homo sapiens vascular endothelial growth factor mRNA, partial cds
Length = 815
Score = 39.3 bits (90), Expect = 0.17
Identities = 21/87 (24%), Positives = 41/87 (46%), Gaps = 2/87 (2%)
Frame = +3
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN ++C P+ + ++++ ++ KP + ++
Sbjct: 264 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRI-----KPHQGQHIGEM 428
Query: 170 RLEEHLECACATSNLNPDHREEETDVR 196
+H +C C R+E+ VR
Sbjct: 429 SFLQHNKCECRPK--KDRARQEKKSVR 503
>emb|AJ010438.1|HSA010438 Homo sapiens mRNA for vascular endothelial growth factor, splicing
variant VEGF183
Length = 630
Score = 39.3 bits (90), Expect = 0.17
Identities = 21/87 (24%), Positives = 41/87 (46%), Gaps = 2/87 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN ++C P+ + ++++ ++ KP + ++
Sbjct: 196 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRI-----KPHQGQHIGEM 360
Query: 170 RLEEHLECACATSNLNPDHREEETDVR 196
+H +C C R+E+ VR
Sbjct: 361 SFLQHNKCECRPK--KDRARQEKKSVR 435
>dbj|AB071947.1|AB071947 Felis catus mRNA for vascular endothelial growth factor, complete
cds
Length = 579
Score = 39.3 bits (90), Expect = 0.17
Identities = 17/70 (24%), Positives = 35/70 (49%), Gaps = 2/70 (2%)
Frame = +3
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN ++C P+ + ++++ ++ KP + ++
Sbjct: 195 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEEFNITMQIMRI-----KPHQGQHIGEM 359
Query: 170 RLEEHLECAC 179
+H +C C
Sbjct: 360 SFLQHSKCEC 389
>gb|M27281.1|HUMVPF Human vascular permeability factor mRNA, complete cds
Length = 1195
Score = 39.3 bits (90), Expect = 0.17
Identities = 21/87 (24%), Positives = 41/87 (46%), Gaps = 2/87 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN ++C P+ + ++++ ++ KP + ++
Sbjct: 352 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRI-----KPHQGQHIGEM 516
Query: 170 RLEEHLECACATSNLNPDHREEETDVR 196
+H +C C R+E+ VR
Sbjct: 517 SFLQHNKCECRPK--KDRARQEKKSVR 591
>gb|AY072734.1| Sus scrofa vascular endothelial growth factor mRNA, partial cds
Length = 461
Score = 39.3 bits (90), Expect = 0.17
Identities = 21/87 (24%), Positives = 41/87 (46%), Gaps = 2/87 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN ++C P+ + ++++ ++ KP + ++
Sbjct: 145 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEEFNIAMQIMRI-----KPHQGQHIGEM 309
Query: 170 RLEEHLECACATSNLNPDHREEETDVR 196
+H +C C R+E+ VR
Sbjct: 310 SFLQHNKCECRPK--KDRARQEKKSVR 384
>gb|AF133248.1|AF133248 Canis familiaris vascular endothelial growth factor 164 (VEGF)
mRNA, complete cds
Length = 600
Score = 39.3 bits (90), Expect = 0.17
Identities = 17/70 (24%), Positives = 35/70 (49%), Gaps = 2/70 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN ++C P+ + ++++ ++ KP + ++
Sbjct: 193 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEEFNITMQIMRI-----KPHQGQHIGEM 357
Query: 170 RLEEHLECAC 179
+H +C C
Sbjct: 358 SFLQHSKCEC 387
>ref|NM_019971.1| Mus musculus platelet-derived growth factor, C polypeptide (Pdgfc),
mRNA
Length = 2692
Score = 39.3 bits (90), Expect = 0.17
Identities = 26/72 (36%), Positives = 36/72 (49%), Gaps = 10/72 (13%)
Frame = +3
Query: 118 LIWPPCVEVKRCTG---CC--NTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEV----- 167
+ WP C+ VKRC G CC N + +C P +V + K +V +R K +K +
Sbjct: 1002 IFWPGCLLVKRCGGNCACCLHNCNECQCVPRKV---TKKYHEVLQLRPKTGVKGLHKSLT 1172
Query: 168 QVRLEEHLECAC 179
V LE H EC C
Sbjct: 1173 DVALEHHEECDC 1208
>gb|AF117608.1|AF117608 Mus musculus fallotein mRNA, complete cds
Length = 2692
Score = 39.3 bits (90), Expect = 0.17
Identities = 26/72 (36%), Positives = 36/72 (49%), Gaps = 10/72 (13%)
Frame = +3
Query: 118 LIWPPCVEVKRCTG---CC--NTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEV----- 167
+ WP C+ VKRC G CC N + +C P +V + K +V +R K +K +
Sbjct: 1002 IFWPGCLLVKRCGGNCACCLHNCNECQCVPRKV---TKKYHEVLQLRPKTGVKGLHKSLT 1172
Query: 168 QVRLEEHLECAC 179
V LE H EC C
Sbjct: 1173 DVALEHHEECDC 1208
>emb|AJ133758.1|CFA133758 Canis familiaris mRNA for vascular endothelial growth factor 188
protein
Length = 645
Score = 39.3 bits (90), Expect = 0.17
Identities = 17/70 (24%), Positives = 35/70 (49%), Gaps = 2/70 (2%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P ++ P CV + RC GCCN ++C P+ + ++++ ++ KP + ++
Sbjct: 193 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEEFNITMQIMRI-----KPHQGQHIGEM 357
Query: 170 RLEEHLECAC 179
+H +C C
Sbjct: 358 SFLQHSKCEC 387
>gb|AF339737.1|AF339737 Macaca mulatta vascular endothelial growth factor mRNA, partial cds
Length = 380
Score = 38.9 bits (89), Expect = 0.22
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +2
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVE 156
P ++ P CV + RC GCCN ++C P+ + ++++ +++
Sbjct: 176 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIK 310
>gb|AF430806.1|AF430806 Homo sapiens vascular endothelial growth factor 165b mRNA, complete
cds, alternatively spliced
Length = 606
Score = 38.9 bits (89), Expect = 0.22
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVE 156
P ++ P CV + RC GCCN ++C P+ + ++++ +++
Sbjct: 196 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIK 330
>gb|AY047581.1| Homo sapiens vascular endothelial growth factor (VEGF) mRNA,
complete cds
Length = 640
Score = 38.9 bits (89), Expect = 0.22
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +2
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVE 156
P ++ P CV + RC GCCN ++C P+ + ++++ +++
Sbjct: 212 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIK 346
>gb|AF318502.1|AF318502 Sus scrofa vascular endothelial growth factor mRNA, complete cds
Length = 582
Score = 38.9 bits (89), Expect = 0.22
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVE 156
P ++ P CV + RC GCCN ++C P+ + ++++ +++
Sbjct: 199 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEEFNIAMQIMRIK 333
>ref|NM_003376.1| Homo sapiens vascular endothelial growth factor (VEGF), mRNA
Length = 649
Score = 38.9 bits (89), Expect = 0.22
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +2
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVE 156
P ++ P CV + RC GCCN ++C P+ + ++++ +++
Sbjct: 212 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIK 346
>emb|X62568.1|HSVEGF H.sapiens vegf gene for vascular endothelial growth factor
Length = 649
Score = 38.9 bits (89), Expect = 0.22
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +2
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVE 156
P ++ P CV + RC GCCN ++C P+ + ++++ +++
Sbjct: 212 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIK 346
>emb|X81380.1|SSVEGF S.scrofa mRNA for vascular endothelial growth factor
Length = 573
Score = 38.9 bits (89), Expect = 0.22
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVE 156
P ++ P CV + RC GCCN ++C P+ + ++++ +++
Sbjct: 193 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEEFNITMQIMRIK 327
>emb|X06301.1|FSSISG6 F.silvestris c-sis proto-oncogene exon 5 and flanks
Length = 185
Score = 38.9 bits (89), Expect = 0.22
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3
Query: 150 VKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
++V K+E VRK+P K+ V LE+HL C C T
Sbjct: 15 LQVRKIEIVRKRPVFKKATVTLEDHLACKCET 110
>gb|M25357.1|CATSIS5 Feline c-sis proto-oncogene, segment 5
Length = 185
Score = 38.9 bits (89), Expect = 0.22
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3
Query: 150 VKVAKVEYVRKKPKLKEVQVRLEEHLECACAT 181
++V K+E VRK+P K+ V LE+HL C C T
Sbjct: 15 LQVRKIEIVRKRPVFKKATVTLEDHLACKCET 110
>gb|AF214570.1|AF214570 Homo sapiens vascular endothelial growth factor isoform 121
precursor, mRNA, complete cds
Length = 444
Score = 38.9 bits (89), Expect = 0.22
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVE 156
P ++ P CV + RC GCCN ++C P+ + ++++ +++
Sbjct: 196 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIK 330
>emb|AJ278192.1|CJA278192 Callithrix jacchus partial mRNA for vascular endothelial growth
factor (vegf gene)
Length = 374
Score = 38.9 bits (89), Expect = 0.22
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +2
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVE 156
P ++ P CV + RC GCCN ++C P+ + ++++ +++
Sbjct: 77 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEEFNITMQIMRIK 211
>gb|S82167.1|S82167 simVEGF165=vascular endothelial growth factor isoform
165/endothelial-specific mitogen {alternatively spliced}
[Macaca fascicularis=cynomolgous monkeys, ischemic
retinas, mRNA Partial, 576 nt]
Length = 576
Score = 38.9 bits (89), Expect = 0.22
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVE 156
P ++ P CV + RC GCCN ++C P+ + ++++ +++
Sbjct: 196 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIK 330
>dbj|AB021221.1|AB021221 Homo sapiens mRNA for vascular endothelial growth factor isoform
VEGF165, complete cds
Length = 576
Score = 38.9 bits (89), Expect = 0.22
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVE 156
P ++ P CV + RC GCCN ++C P+ + ++++ +++
Sbjct: 196 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIK 330
>gb|AF091352.1|AF091352 Homo sapiens vascular permeability factor 148 mRNA, complete cds
Length = 541
Score = 38.9 bits (89), Expect = 0.22
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVE 156
P ++ P CV + RC GCCN ++C P+ + ++++ +++
Sbjct: 196 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIK 330
>gb|M32977.1|HUMEGFAA Human heparin-binding vascular endothelial growth factor (VEGF)
mRNA, complete cds
Length = 990
Score = 38.9 bits (89), Expect = 0.22
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +3
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVE 156
P ++ P CV + RC GCCN ++C P+ + ++++ +++
Sbjct: 252 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIK 386
>emb|Y12866.1|HSY12866 Homo sapiens FIGF gene, exon 3
Length = 211
Score = 38.5 bits (88), Expect = 0.28
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 114 SANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKV 152
S N PPCV V RC GCCN S+ C + + S +V
Sbjct: 88 STNTFFKPPCVNVFRCGGCCNEESLICMNTSTSYISKQV 204
>ref|NM_031317.1| Rattus norvegicus platelet-derived growth factor, C polypeptide
(Pdgfc), mRNA
Length = 1116
Score = 38.5 bits (88), Expect = 0.28
Identities = 22/69 (31%), Positives = 29/69 (41%), Gaps = 7/69 (10%)
Frame = +1
Query: 118 LIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKL-------KEVQVR 170
+ WP C+ VKRC G C C + R V E ++ +PK+ V
Sbjct: 805 IFWPGCLLVKRCGGNCACCLHNCNECQCVPRKVTKKYHEVLQLRPKIGVKGLHKSLTDVA 984
Query: 171 LEEHLECAC 179
LE H EC C
Sbjct: 985 LEHHEECDC 1011
>dbj|AB033830.1|AB033830 Rattus norvegicus rScdgf mRNA for spinal cord-derived growth
factor, complete cds
Length = 1116
Score = 38.5 bits (88), Expect = 0.28
Identities = 22/69 (31%), Positives = 29/69 (41%), Gaps = 7/69 (10%)
Frame = +1
Query: 118 LIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKL-------KEVQVR 170
+ WP C+ VKRC G C C + R V E ++ +PK+ V
Sbjct: 805 IFWPGCLLVKRCGGNCACCLHNCNECQCVPRKVTKKYHEVLQLRPKIGVKGLHKSLTDVA 984
Query: 171 LEEHLECAC 179
LE H EC C
Sbjct: 985 LEHHEECDC 1011
>gb|AY033152.1| Bothrops jararaca vascular endothelial growth factor precursor,
mRNA, complete cds
Length = 1216
Score = 38.5 bits (88), Expect = 0.28
Identities = 23/86 (26%), Positives = 37/86 (42%)
Frame = +1
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
+VC+ R + I P + + P CV RC GCC S++C + RSV
Sbjct: 313 SVCQPRETLVSILEEY--PGEISHIFRPSCVTALRCGGCCTDESLEC--TATGKRSVGRE 480
Query: 154 KVEYVRKKPKLKEVQVRLEEHLECAC 179
+ K ++ ++ EH +C C
Sbjct: 481 IMRLSPHKGTSEKEVMQFTEHTDCEC 558
>gb|L20913.1|RATVEGF3H Rat vascular endothelial growth factor form 3 mRNA, partial cds
Length = 432
Score = 38.5 bits (88), Expect = 0.28
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKE--VQV 169
P + P CV + RC GCCN +++C P+ + ++++ ++ KP + ++
Sbjct: 77 PDEIECIFKPSCVPLMRCAGCCNDEALECVPTSESNVTMQIMRI-----KPHQSQHIGEM 241
Query: 170 RLEEHLECAC 179
+H C C
Sbjct: 242 SFLQHSRCEC 271
>gb|AF099134.1|AF099134 Bos taurus vascular endothelial growth factor-B (VEGF-B) mRNA,
partial cds
Length = 202
Score = 38.1 bits (87), Expect = 0.37
Identities = 19/62 (30%), Positives = 33/62 (52%)
Frame = +2
Query: 94 AVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVA 153
A C+ R V+ + ++ T A L+ P CV V+RC GCC ++C P+ H +++
Sbjct: 23 ATCQPREVVVPL-NMELMGTVAKQLV-PSCVTVQRCGGCCPDDGLECVPTGQHQVRMQIL 196
Query: 154 KV 155
+
Sbjct: 197 MI 202
>gb|U50279.1|MMU50279 Mus musculus VEGF115 mRNA, complete cds
Length = 469
Score = 38.1 bits (87), Expect = 0.37
Identities = 13/41 (31%), Positives = 24/41 (57%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKV 152
P ++ P CV + RC GCCN +++C P+ + +++V
Sbjct: 193 PDEIEYIFKPSCVPLMRCAGCCNDEALECVPTSESNITMQV 315
>gb|AF297627.1|AF297627 Mesocricetus auratus vascular endothelial growth factor VEGF mRNA,
partial cds
Length = 426
Score = 38.1 bits (87), Expect = 0.37
Identities = 18/79 (22%), Positives = 39/79 (48%), Gaps = 14/79 (17%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV--------------EY 157
P ++ P CV + RC GCC+ +++C P+ + ++++ +V ++
Sbjct: 61 PDEIEYIFKPSCVPLMRCGGCCSDEALECVPTSESNITMQIMRVKPHQSQHIGEMSFLQH 240
Query: 158 VRKKPKLKEVQVRLEEHLE 176
R + + K+V+ + E H E
Sbjct: 241 SRCECRPKKVRTKPENHCE 297
>dbj|AB033829.1|AB033829 Gallus gallus SCDGF mRNA for spinal cord-derived growth factor,
complete cds
Length = 1675
Score = 38.1 bits (87), Expect = 0.37
Identities = 25/70 (35%), Positives = 35/70 (49%), Gaps = 8/70 (11%)
Frame = +1
Query: 118 LIWPPCVEVKRCTG---CC--NTSSVKCQPSRV---HHRSVKVAKVEYVRKKPKLKEVQV 169
+ WP C+ VKRC G CC N + +C P++V +H +++ VR K V
Sbjct: 907 IFWPLCLLVKRCGGNCACCHQNCNECQCIPTKVTKKYHEVLQLKPRSGVRGLHK-SLTDV 1083
Query: 170 RLEEHLECAC 179
LE H EC C
Sbjct: 1084PLEHHEECDC 1113
>gb|AF063013.1|AF063013 Mesocricetus auratus endothelial growth factor-164 precursor, mRNA,
complete cds
Length = 573
Score = 38.1 bits (87), Expect = 0.37
Identities = 18/79 (22%), Positives = 39/79 (48%), Gaps = 14/79 (17%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV--------------EY 157
P ++ P CV + RC GCC+ +++C P+ + ++++ +V ++
Sbjct: 193 PDEIEYIFKPSCVPLMRCGGCCSDEALECVPTSESNITMQIMRVKPHQSQHIGEMSFLQH 372
Query: 158 VRKKPKLKEVQVRLEEHLE 176
R + + K+V+ + E H E
Sbjct: 373 SRCECRPKKVRTKPENHCE 429
>ref|XM_087972.1| Homo sapiens similar to dJ261G23.6.5 (vascular endothelial growth
factor) (LOC154490), mRNA
Length = 2322
Score = 37.4 bits (85), Expect = 0.63
Identities = 13/41 (31%), Positives = 23/41 (55%)
Frame = +2
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKV 152
P ++ P CV + RC GCCN ++C P+ + +++V
Sbjct: 1088 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQV 1210
>dbj|AK056914.1|AK056914 Homo sapiens cDNA FLJ32352 fis, clone PROST2007389, moderately
similar to VASCULAR ENDOTHELIAL GROWTH FACTOR PRECURSOR
Length = 2322
Score = 37.4 bits (85), Expect = 0.63
Identities = 13/41 (31%), Positives = 23/41 (55%)
Frame = +2
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKV 152
P ++ P CV + RC GCCN ++C P+ + +++V
Sbjct: 1088 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQV 1210
>gb|AF437895.1|AF437895 Homo sapiens vascular endothelial growth factor (VEGF) gene, partial
cds
Length = 15442
Score = 37.4 bits (85), Expect = 0.63
Identities = 13/41 (31%), Positives = 23/41 (55%)
Frame = +3
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKV 152
P ++ P CV + RC GCCN ++C P+ + +++V
Sbjct: 5280 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQV 5402
>emb|AL136131.15|AL136131 Human DNA sequence from clone RP1-261G23 on chromosome 6p12.2-21.1
Contains ESTs, STSs, GSSs and CpG islands. Contains the
KIAA0110 gene, two novel genes, a novel pseudogene similar
to OPA-interacting protein (OIP1), a putative novel gene,
and the VEGF>
Length = 172033
Score = 37.4 bits (85), Expect = 0.63
Identities = 13/41 (31%), Positives = 23/41 (55%)
Frame = +2
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKV 152
P ++ P CV + RC GCCN ++C P+ + +++V
Sbjct: 143264 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQV 143386
>gb|M63973.1|HUMVEGF3 Human vascular endothelial growth factor gene, exon 3
Length = 231
Score = 37.4 bits (85), Expect = 0.63
Identities = 13/41 (31%), Positives = 23/41 (55%)
Frame = +2
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKV 152
P ++ P CV + RC GCCN ++C P+ + +++V
Sbjct: 95 PDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQV 217
>ref|XM_096295.1| Homo sapiens c-fos induced growth factor (vascular endothelial
growth factor D) (FIGF), mRNA
Length = 1001
Score = 37.4 bits (85), Expect = 0.63
Identities = 15/27 (55%), Positives = 16/27 (58%)
Frame = +3
Query: 114 SANFLIWPPCVEVKRCTGCCNTSSVKC 140
S N PPCV V RC GCCN S+ C
Sbjct: 888 STNTFFKPPCVNVFRCGGCCNEESLIC 968
>ref|XM_071640.1| Homo sapiens hypothetical gene supported by NM_004469 (LOC139447),
mRNA
Length = 1001
Score = 37.4 bits (85), Expect = 0.63
Identities = 15/27 (55%), Positives = 16/27 (58%)
Frame = +3
Query: 114 SANFLIWPPCVEVKRCTGCCNTSSVKC 140
S N PPCV V RC GCCN S+ C
Sbjct: 888 STNTFFKPPCVNVFRCGGCCNEESLIC 968
>ref|NM_008827.1| Mus musculus placental growth factor (Pgf), mRNA
Length = 1580
Score = 36.6 bits (83), Expect = 1.1
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV 155
P + + P CV + RC+GCC + C P + + ++++ K+
Sbjct: 501 PDEVSHIFSPSCVLLSRCSGCCGDEGLHCVPIKTANITMQILKI 632
>gb|AF083221.1|AF083221 Fugu rubripes putative neurotransmitter receptors, YDR140w homolog,
and glycinamide ribonucleotide transformylase (GART)
genes, complete cds
Length = 43373
Score = 36.6 bits (83), Expect = 1.1
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -2
Query: 88 IEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCNTSSVKC 140
+EE C+ R V E+ + + TS ++ P CV + RC GCC + + C
Sbjct: 6994 LEEMKRTSCQPREVCVEVTKEYRESTSHFYI--PRCVSLHRCGGCCTSEAFYC 6842
>emb|X96793.1|MMPGF M.musculus mRNA for placenta growth factor
Length = 1580
Score = 36.6 bits (83), Expect = 1.1
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV 155
P + + P CV + RC+GCC + C P + + ++++ K+
Sbjct: 501 PDEVSHIFSPSCVLLSRCSGCCGDEGLHCVPIKTANITMQILKI 632
>emb|X80171.1|MMP1GF Mus musculus mRNA for placenta growth factor (PLGF gene)
Length = 1370
Score = 36.6 bits (83), Expect = 1.1
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV 155
P + + P CV + RC+GCC + C P + + ++++ K+
Sbjct: 302 PDEVSHIFSPSCVLLSRCSGCCGDEGLHCVPIKTANITMQILKI 433
>gb|BC016567.1|BC016567 Mus musculus, placental growth factor, clone MGC:11485
IMAGE:2649577, mRNA, complete cds
Length = 1674
Score = 36.6 bits (83), Expect = 1.1
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKV 155
P + + P CV + RC+GCC + C P + + ++++ K+
Sbjct: 506 PDEVSHIFSPSCVLLSRCSGCCGDEGLHCVPIKTANITMQILKI 637
>gb|AC006530.4|AC006530 Homo sapiens chromosome 14 clone BAC 316E14 map 14q24.3, complete
sequence
Length = 203010
Score = 36.2 bits (82), Expect = 1.4
Identities = 13/41 (31%), Positives = 22/41 (52%)
Frame = -2
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKV 152
P+ + P CV + RCTGCC ++ C P + +++V
Sbjct: 99878 PSEVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANVTMQV 99756
>dbj|AK003359.1|AK003359 Mus musculus 18 days embryo whole body cDNA, RIKEN full-length
enriched library, clone:1110003I09:homolog to SPINAL-CORD
DERIVED GROWTH FACTOR-B, full insert sequence
Length = 1796
Score = 35.8 bits (81), Expect = 1.8
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Frame = +2
Query: 116 NFLIWPPCVEVKRCTGCC-----NTSSVKCQPSRVHHRSVKVAKVE--YVRKKPKLKE-- 166
N + +P C+ V+RC G C N S C + + +V K E + +++ K K
Sbjct: 1049 NAVFFPRCLLVQRCGGNCGCGTVNWKSCTCSSGKTVKKYHEVLKFEPGHFKRRGKAKNMA 1228
Query: 167 -VQVRLEEHLECACATSNLNP 186
V ++L+ H C C S+ P
Sbjct: 1229 LVDIQLDHHERCDCICSSRPP 1291
>dbj|AB033832.1|AB033832 Homo sapiens hSCDGF-B mRNA for spinal cord-derived growth factor-B,
complete cds
Length = 1428
Score = 35.8 bits (81), Expect = 1.8
Identities = 22/82 (26%), Positives = 40/82 (47%), Gaps = 10/82 (12%)
Frame = +1
Query: 115 ANFLIWPPCVEVKRCTGCC-----NTSSVKCQPSRVHHRSVKVAKVE--YVRKKPKLKE- 166
AN + +P C+ V+RC G C N S C + + +V + E +++++ + K
Sbjct: 1018 ANVVFFPRCLLVQRCGGNCGCGTVNWRSCTCNSGKTVKKYHEVLQFEPGHIKRRGRAKTM 1197
Query: 167 --VQVRLEEHLECACATSNLNP 186
V ++L+ H C C S+ P
Sbjct: 1198 ALVDIQLDHHERCDCICSSRPP 1263
>gb|AY027517.1| Homo sapiens iris-expressed growth factor long form (IEGF) mRNA,
complete cds, alternatively spliced
Length = 3729
Score = 35.8 bits (81), Expect = 1.8
Identities = 22/82 (26%), Positives = 40/82 (47%), Gaps = 10/82 (12%)
Frame = +3
Query: 115 ANFLIWPPCVEVKRCTGCC-----NTSSVKCQPSRVHHRSVKVAKVE--YVRKKPKLKE- 166
AN + +P C+ V+RC G C N S C + + +V + E +++++ + K
Sbjct: 954 ANVVFFPRCLLVQRCGGNCGCGTVNWRSCTCNSGKTVKKYHEVLQFEPGHIKRRGRAKTM 1133
Query: 167 --VQVRLEEHLECACATSNLNP 186
V ++L+ H C C S+ P
Sbjct: 1134 ALVDIQLDHHERCDCICSSRPP 1199
>gb|M84449.1|MUSSIS02 Mus musculus platelet-derived growth factor beta-chain (sis) gene,
exon 2
Length = 594
Score = 35.8 bits (81), Expect = 1.8
Identities = 19/33 (57%), Positives = 20/33 (60%)
Frame = +2
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAED 57
IP EL E L+ I S DLQRLL DSVG D
Sbjct: 311 IPEELYEMLSDHSIRSFDDLQRLLHRDSVGKSD 409
>gb|AF335584.1|AF335584 Homo sapiens platelet-derived growth factor D mRNA, complete cds
Length = 1828
Score = 35.8 bits (81), Expect = 1.8
Identities = 22/82 (26%), Positives = 40/82 (47%), Gaps = 10/82 (12%)
Frame = +2
Query: 115 ANFLIWPPCVEVKRCTGCC-----NTSSVKCQPSRVHHRSVKVAKVE--YVRKKPKLKE- 166
AN + +P C+ V+RC G C N S C + + +V + E +++++ + K
Sbjct: 1043 ANVVFFPRCLLVQRCGGNCGCGTVNWRSCTCNSGKTVKKYHEVLQFEPGHIKRRGRAKTM 1222
Query: 167 --VQVRLEEHLECACATSNLNP 186
V ++L+ H C C S+ P
Sbjct: 1223 ALVDIQLDHHERCDCICSSRPP 1288
>ref|NM_033135.1| Homo sapiens spinal cord-derived growth factor-B (SCDGF-B),
transcript variant 2, mRNA
Length = 3790
Score = 35.8 bits (81), Expect = 1.8
Identities = 22/82 (26%), Positives = 40/82 (47%), Gaps = 10/82 (12%)
Frame = +2
Query: 115 ANFLIWPPCVEVKRCTGCC-----NTSSVKCQPSRVHHRSVKVAKVE--YVRKKPKLKE- 166
AN + +P C+ V+RC G C N S C + + +V + E +++++ + K
Sbjct: 1019 ANVVFFPRCLLVQRCGGNCGCGTVNWRSCTCNSGKTVKKYHEVLQFEPGHIKRRGRAKTM 1198
Query: 167 --VQVRLEEHLECACATSNLNP 186
V ++L+ H C C S+ P
Sbjct: 1199 ALVDIQLDHHERCDCICSSRPP 1264
>dbj|AB052170.1|AB052170 Rattus norvegicus rSCDGF-B mRNA for spinal-cord derived growth
factor-B, complete cds
Length = 1386
Score = 35.8 bits (81), Expect = 1.8
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Frame = +1
Query: 116 NFLIWPPCVEVKRCTGCC-----NTSSVKCQPSRVHHRSVKVAKVE--YVRKKPKLKE-- 166
N + +P C+ V+RC G C N S C + + +V K E + +++ K K
Sbjct: 1024 NAVFFPRCLLVQRCGGNCGCGTLNWKSCTCSSGKTVKKYHEVLKFEPGHFKRRGKAKNMA 1203
Query: 167 -VQVRLEEHLECACATSNLNP 186
V ++L+ H C C S+ P
Sbjct: 1204 LVDIQLDHHERCDCICSSRPP 1266
>gb|AF336376.1|AF336376 Homo sapiens platelet-derived growth factor D (PDGFD) mRNA, complete
cds
Length = 2253
Score = 35.8 bits (81), Expect = 1.8
Identities = 22/82 (26%), Positives = 40/82 (47%), Gaps = 10/82 (12%)
Frame = +2
Query: 115 ANFLIWPPCVEVKRCTGCC-----NTSSVKCQPSRVHHRSVKVAKVE--YVRKKPKLKE- 166
AN + +P C+ V+RC G C N S C + + +V + E +++++ + K
Sbjct: 1037 ANVVFFPRCLLVQRCGGNCGCGTVNWRSCTCNSGKTVKKYHEVLQFEPGHIKRRGRAKTM 1216
Query: 167 --VQVRLEEHLECACATSNLNP 186
V ++L+ H C C S+ P
Sbjct: 1217 ALVDIQLDHHERCDCICSSRPP 1282
>ref|NM_025208.2| Homo sapiens spinal cord-derived growth factor-B (SCDGF-B),
transcript variant 1, mRNA
Length = 3808
Score = 35.8 bits (81), Expect = 1.8
Identities = 22/82 (26%), Positives = 40/82 (47%), Gaps = 10/82 (12%)
Frame = +2
Query: 115 ANFLIWPPCVEVKRCTGCC-----NTSSVKCQPSRVHHRSVKVAKVE--YVRKKPKLKE- 166
AN + +P C+ V+RC G C N S C + + +V + E +++++ + K
Sbjct: 1037 ANVVFFPRCLLVQRCGGNCGCGTVNWRSCTCNSGKTVKKYHEVLQFEPGHIKRRGRAKTM 1216
Query: 167 --VQVRLEEHLECACATSNLNP 186
V ++L+ H C C S+ P
Sbjct: 1217 ALVDIQLDHHERCDCICSSRPP 1282
>gb|AF335583.1|AF335583 Mus musculus platelet-derived growth factor D mRNA, complete cds
Length = 1113
Score = 35.8 bits (81), Expect = 1.8
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Frame = +1
Query: 116 NFLIWPPCVEVKRCTGCC-----NTSSVKCQPSRVHHRSVKVAKVE--YVRKKPKLKE-- 166
N + +P C+ V+RC G C N S C + + +V K E + +++ K K
Sbjct: 865 NAVFFPRCLLVQRCGGNCGCGTVNWKSCTCSSGKTVKKYHEVLKFEPGHFKRRGKAKNMA 1044
Query: 167 -VQVRLEEHLECACATSNLNP 186
V ++L+ H C C S+ P
Sbjct: 1045LVDIQLDHHERCDCICSSRPP 1107
>gb|AY027518.1| Homo sapiens iris-expressed growth factor short form (IEGF) mRNA,
complete cds, alternatively spliced
Length = 3710
Score = 35.8 bits (81), Expect = 1.8
Identities = 22/82 (26%), Positives = 40/82 (47%), Gaps = 10/82 (12%)
Frame = +3
Query: 115 ANFLIWPPCVEVKRCTGCC-----NTSSVKCQPSRVHHRSVKVAKVE--YVRKKPKLKE- 166
AN + +P C+ V+RC G C N S C + + +V + E +++++ + K
Sbjct: 936 ANVVFFPRCLLVQRCGGNCGCGTVNWRSCTCNSGKTVKKYHEVLQFEPGHIKRRGRAKTM 1115
Query: 167 --VQVRLEEHLECACATSNLNP 186
V ++L+ H C C S+ P
Sbjct: 1116 ALVDIQLDHHERCDCICSSRPP 1181
>gb|AF113216.1|AF113216 Homo sapiens MSTP036 mRNA, complete cds
Length = 3739
Score = 35.8 bits (81), Expect = 1.8
Identities = 22/82 (26%), Positives = 40/82 (47%), Gaps = 10/82 (12%)
Frame = +2
Query: 115 ANFLIWPPCVEVKRCTGCC-----NTSSVKCQPSRVHHRSVKVAKVE--YVRKKPKLKE- 166
AN + +P C+ V+RC G C N S C + + +V + E +++++ + K
Sbjct: 968 ANVVFFPRCLLVQRCGGNCGCGTVNWRSCTCNSGKTVKKYHEVLQFEPGHIKRRGRAKTM 1147
Query: 167 --VQVRLEEHLECACATSNLNP 186
V ++L+ H C C S+ P
Sbjct: 1148 ALVDIQLDHHERCDCICSSRPP 1213
>gb|M64845.1|MUSCSIS02 Mouse platelet-derived growth factor B chain (c-sis) gene, exon 2
Length = 601
Score = 35.8 bits (81), Expect = 1.8
Identities = 19/33 (57%), Positives = 20/33 (60%)
Frame = +2
Query: 25 IPRELIERLARSQIHSIRDLQRLLEIDSVGAED 57
IP EL E L+ I S DLQRLL DSVG D
Sbjct: 311 IPEELYEMLSDHSIRSFDDLQRLLHRDSVGKSD 409
>gb|AC008483.7| Homo sapiens chromosome 5 clone CTC-406I6, complete sequence
Length = 152533
Score = 35.4 bits (80), Expect = 2.4
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 131 GCCNTSSVKCQPSRVHHR-SVKVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNP 186
GC S C P+ R S+ K + + KP+ K ++++ H+E AC T N+ P
Sbjct: 43750 GCSEPRSHHCTPAWATERDSISEKKRKKKKPKPETKRDLIKIKMHMENACLTHNVTP 43920
>gb|AC010423.7|AC010423 Homo sapiens chromosome 5 clone CTD-2193G5, complete sequence
Length = 183795
Score = 35.4 bits (80), Expect = 2.4
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -3
Query: 131 GCCNTSSVKCQPSRVHHR-SVKVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNP 186
GC S C P+ R S+ K + + KP+ K ++++ H+E AC T N+ P
Sbjct: 50944 GCSEPRSHHCTPAWATERDSISEKKRKKKKPKPETKRDLIKIKMHMENACLTHNVTP 50774
>gb|AF022375.1|AF022375 Homo sapiens vascular endothelial growth factor mRNA, complete cds
Length = 3166
Score = 35.0 bits (79), Expect = 3.1
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = +3
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVE 156
P ++ P CV + RC GC N ++C P+ + ++++ +++
Sbjct: 897 PDEIEYIFKPSCVPLMRCGGCSNDEGLECVPTEESNITMQIMRIK 1031
>ref|NM_053595.1| Rattus norvegicus placental growth factor (Pgf), mRNA
Length = 665
Score = 34.7 bits (78), Expect = 4.1
Identities = 15/66 (22%), Positives = 29/66 (43%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171
P + + P CV + RC+GCC + C + + ++++ K+ R E+
Sbjct: 223 PNEVSHIFSPSCVLLSRCSGCCGDEGLHCVALKTANITMQILKIPPNRDPHSYVEMTFSQ 402
Query: 172 EEHLEC 177
+ EC
Sbjct: 403 DVLCEC 420
>gb|L40030.1|RATPLGF Rattus norvegicus placenta growth factor (PlGF) mRNA, complete cds
Length = 665
Score = 34.7 bits (78), Expect = 4.1
Identities = 15/66 (22%), Positives = 29/66 (43%)
Frame = +1
Query: 112 PTSANFLIWPPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRL 171
P + + P CV + RC+GCC + C + + ++++ K+ R E+
Sbjct: 223 PNEVSHIFSPSCVLLSRCSGCCGDEGLHCVALKTANITMQILKIPPNRDPHSYVEMTFSQ 402
Query: 172 EEHLEC 177
+ EC
Sbjct: 403 DVLCEC 420
>ref|XM_059399.2| Homo sapiens similar to putative (LOC130106), mRNA
Length = 705
Score = 34.3 bits (77), Expect = 5.4
Identities = 18/48 (37%), Positives = 26/48 (53%)
Frame = -3
Query: 87 SIEEAIPAVCKTRTVIYEIPRSQVDPTSANFLIWPPCVEVKRCTGCCN 134
S+E A+ VC+ IPRS+ + +S N WP V+ R T CC+
Sbjct: 595 SLEAAMSGVCR----YISIPRSESERSS*NLETWPLHVQTLRRTACCH 464
>gb|AF399758.1|AF399758 Pseudomonas fluorescens L-aspartate oxidase (nadB) gene, partial cds;
alternative sigma factor AlgU (algU) and anti-sigma
factor MucA (mucA) genes, complete cds; and MucB (mucB)
gene, partial cds
Length = 2825
Score = 34.3 bits (77), Expect = 5.4
Identities = 22/79 (27%), Positives = 34/79 (42%), Gaps = 3/79 (3%)
Frame = -1
Query: 75 PEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDP---TSANFLIWPPCVEVKRCTG 131
P P+RR+ SI +AIP R + Y PR+ + S FL W + C
Sbjct: 1640 PRSHGFPLRRRHSIPDAIP----VRPLRYPSPRTAIPAGLHDSWRFLSWLSPLSQVSCNN 1473
Query: 132 CCNTSSVKCQPSRVHHRSV 150
C S+ + ++ R+V
Sbjct: 1472 GCRALSMASRARKIRERTV 1416
>emb|AL020993.1|HS5O6 Human DNA sequence from clone RP1-5O6 on chromosome 22q12 Contains the
5' part of the gene for a novel protein similar to C.
elegans F40E10.6, the CSNK1E gene for casein kinase I
epsilon, ESTs, STSs, a GSS and two putative CpG islands,
complete sequence
Length = 106008
Score = 33.9 bits (76), Expect = 7.0
Identities = 30/101 (29%), Positives = 45/101 (43%), Gaps = 6/101 (5%)
Frame = +1
Query: 21 EEAEIPRELIERLARSQIHSIRDLQRLLEI------DSVGAEDALETSLRAHGSHAINHV 74
++A++ L+ L + QI DL+ L + S G E SLR HG A+ +
Sbjct: 74587 QKAQLRLSLLRSLVKWQILEKPDLRGSLPVRG*VRGPSTGTGAGTERSLRCHG--AVTGL 74760
Query: 75 PEKRPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQVDPTSA 115
R P+ +KR C+TR I +IP V P +A
Sbjct: 74761 SLARGSPLFQKR---------CETRHTISQIPELWVRPANA 74856
>emb|Z34093.1|TGVPOLL Transmissible gastroenteritis virus (Purdue-115) mRNA for polymerase
locus
Length = 20600
Score = 33.9 bits (76), Expect = 7.0
Identities = 20/65 (30%), Positives = 28/65 (42%)
Frame = -3
Query: 128 RCTGCCNTSSVKCQPSRVHHRSVKVAKVEYVRKKPKLKEVQVRLEEHLECACATSNLNPD 187
R CCN V Q HH+ + V PKLK+ + +L C C + NPD
Sbjct: 2610 RYRACCNLLKVG*QNLCSHHKLLSHHYRSKVEHSPKLKD-----QSNLACNCTKWHHNPD 2446
Query: 188 HREEE 192
E++
Sbjct: 2445 QEEDQ 2431
>gb|AC091393.2| Homo sapiens chromosome 5 clone CTC-571O20, complete sequence
Length = 232668
Score = 33.9 bits (76), Expect = 7.0
Identities = 16/53 (30%), Positives = 26/53 (48%)
Frame = -2
Query: 51 DSVGAEDALETSLRAHGSHAINHVPEKRPVPIRRKRSIEEAIPAVCKTRTVIY 103
D + A D LE L ++ I HVP P+P+ +K+ + I K ++Y
Sbjct: 192998 DCIPARDLLEAPLTSYACSTIRHVPH*APLPLVKKKKKKGMISGYGKRLVILY 192840
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,
or phase 0, 1 or 2 HTGS sequences)
Posted date: Feb 12, 2002 2:19 AM
Number of letters in database: 566,364,212
Number of sequences in database: 1,171,752
Lambda K H
0.318 0.132 0.00
Gapped
Lambda K H
0.267 0.0410 7.29e-304
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,137,151,661
Number of Sequences: 1171752
Number of extensions: 18884068
Number of successful extensions: 113563
Number of sequences better than 10.0: 514
Number of HSP's better than 10.0 without gapping: 73586
Number of HSP's successfully gapped in prelim test: 3715
Number of HSP's that attempted gapping in prelim test: 20980
Number of HSP's gapped (non-prelim): 101408
length of query: 196
length of database: 1,620,443,836
effective HSP length: 128
effective length of query: 68
effective length of database: 1,470,459,580
effective search space: 99991251440
effective search space used: 99991251440
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)